Query psy12303
Match_columns 480
No_of_seqs 258 out of 2865
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 15:33:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12303.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12303hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 6.4E-81 1.4E-85 621.3 49.4 463 3-479 58-532 (539)
2 PLN02880 tyrosine decarboxylas 100.0 5.4E-76 1.2E-80 587.6 46.9 461 3-479 14-484 (490)
3 KOG0629|consensus 100.0 2.9E-77 6.3E-82 545.2 33.2 475 3-480 32-510 (510)
4 KOG0628|consensus 100.0 1E-73 2.3E-78 528.0 35.9 453 3-479 5-471 (511)
5 TIGR03799 NOD_PanD_pyr putativ 100.0 9.9E-66 2.1E-70 513.9 46.7 458 4-474 24-520 (522)
6 PF00282 Pyridoxal_deC: Pyrido 100.0 6E-66 1.3E-70 499.2 27.3 364 35-404 1-372 (373)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 6.2E-59 1.3E-63 467.5 46.2 457 5-478 20-601 (608)
8 COG0076 GadB Glutamate decarbo 100.0 2.4E-52 5.1E-57 410.1 37.0 436 14-474 3-444 (460)
9 TIGR01788 Glu-decarb-GAD gluta 100.0 8.5E-52 1.8E-56 405.9 38.0 401 43-480 14-430 (431)
10 PLN02263 serine decarboxylase 100.0 1.2E-50 2.7E-55 393.5 35.7 356 53-478 75-442 (470)
11 PLN03032 serine decarboxylase; 100.0 3.1E-45 6.7E-50 352.0 34.8 353 55-476 10-373 (374)
12 PRK02769 histidine decarboxyla 100.0 1.9E-44 4E-49 349.7 35.9 353 54-478 8-371 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 7.9E-43 1.7E-47 340.5 33.8 343 75-476 1-345 (345)
14 COG0520 csdA Selenocysteine ly 100.0 3.3E-38 7.1E-43 307.1 36.3 357 73-478 23-404 (405)
15 COG1104 NifS Cysteine sulfinat 100.0 6.4E-37 1.4E-41 286.1 32.2 351 73-479 2-377 (386)
16 PRK13520 L-tyrosine decarboxyl 100.0 4.2E-36 9E-41 296.1 35.8 368 51-478 2-370 (371)
17 TIGR03812 tyr_de_CO2_Arch tyro 100.0 6.1E-35 1.3E-39 287.9 36.5 369 52-476 1-373 (373)
18 PRK10874 cysteine sulfinate de 100.0 9.2E-33 2E-37 274.6 34.3 355 73-479 20-398 (401)
19 TIGR03392 FeS_syn_CsdA cystein 100.0 1.1E-32 2.3E-37 273.9 33.5 354 73-479 17-395 (398)
20 PRK09295 bifunctional cysteine 100.0 9.6E-33 2.1E-37 274.7 32.9 354 73-478 24-403 (406)
21 KOG1383|consensus 100.0 1.5E-32 3.2E-37 256.1 30.5 387 43-479 53-446 (491)
22 TIGR03402 FeS_nifS cysteine de 100.0 2.8E-32 6E-37 269.3 32.8 342 74-479 1-372 (379)
23 TIGR01979 sufS cysteine desulf 100.0 4.5E-32 9.7E-37 270.1 34.0 354 74-480 20-402 (403)
24 cd06453 SufS_like Cysteine des 100.0 8.2E-32 1.8E-36 265.6 33.2 350 75-473 2-373 (373)
25 TIGR01977 am_tr_V_EF2568 cyste 100.0 9.7E-32 2.1E-36 265.4 32.5 345 75-475 2-375 (376)
26 PRK04366 glycine dehydrogenase 100.0 1.9E-31 4E-36 268.5 34.8 397 34-479 34-448 (481)
27 PLN02651 cysteine desulfurase 100.0 1.3E-31 2.9E-36 262.6 31.5 336 74-467 1-364 (364)
28 PLN02855 Bifunctional selenocy 100.0 2.1E-31 4.5E-36 266.5 32.5 356 72-479 32-418 (424)
29 TIGR00461 gcvP glycine dehydro 100.0 1.4E-30 3.1E-35 270.7 36.1 381 52-479 467-867 (939)
30 PF00266 Aminotran_5: Aminotra 100.0 3.5E-31 7.7E-36 260.5 29.4 346 75-469 2-371 (371)
31 TIGR02006 IscS cysteine desulf 100.0 1E-30 2.2E-35 259.5 31.6 345 73-479 4-377 (402)
32 TIGR03403 nifS_epsilon cystein 100.0 3.9E-30 8.4E-35 254.1 34.0 346 75-479 2-375 (382)
33 PRK00451 glycine dehydrogenase 100.0 3.6E-30 7.8E-35 259.3 33.0 409 5-477 9-446 (447)
34 PRK05367 glycine dehydrogenase 100.0 1.2E-29 2.6E-34 268.8 35.4 396 34-479 458-875 (954)
35 cd06451 AGAT_like Alanine-glyo 100.0 7.1E-30 1.5E-34 250.1 30.9 321 107-478 27-356 (356)
36 PRK02948 cysteine desulfurase; 100.0 4.8E-30 1E-34 253.5 29.6 346 74-479 2-374 (381)
37 TIGR01814 kynureninase kynuren 100.0 1.7E-29 3.7E-34 251.1 33.0 354 71-477 26-405 (406)
38 KOG1549|consensus 100.0 3.1E-30 6.7E-35 241.9 24.3 357 69-479 40-418 (428)
39 TIGR01976 am_tr_V_VC1184 cyste 100.0 6E-29 1.3E-33 247.2 32.0 342 74-473 19-397 (397)
40 PRK14012 cysteine desulfurase; 100.0 6.4E-29 1.4E-33 246.9 31.8 345 73-479 4-379 (404)
41 PLN02409 serine--glyoxylate am 100.0 9.7E-29 2.1E-33 244.6 30.6 324 107-479 37-372 (401)
42 PLN02414 glycine dehydrogenase 100.0 2.5E-28 5.4E-33 257.3 34.5 381 51-479 504-907 (993)
43 cd00613 GDC-P Glycine cleavage 100.0 1.4E-28 3E-33 244.8 30.7 372 55-473 3-398 (398)
44 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 9.8E-28 2.1E-32 236.6 35.4 313 112-479 63-381 (387)
45 TIGR02326 transamin_PhnW 2-ami 100.0 2.6E-28 5.7E-33 239.5 30.7 321 108-478 31-361 (363)
46 TIGR03531 selenium_SpcS O-phos 100.0 6.6E-28 1.4E-32 235.7 29.4 304 43-394 27-355 (444)
47 TIGR03235 DNA_S_dndA cysteine 100.0 3.2E-27 6.8E-32 230.9 28.8 291 75-403 1-299 (353)
48 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 9.4E-27 2E-31 228.2 31.3 343 79-476 4-354 (355)
49 PLN02724 Molybdenum cofactor s 100.0 1.4E-27 3E-32 254.0 26.5 367 73-477 35-486 (805)
50 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 5.8E-26 1.3E-30 222.5 34.8 309 114-477 46-360 (361)
51 PRK13479 2-aminoethylphosphona 100.0 4.1E-26 8.9E-31 224.5 32.7 322 108-479 33-363 (368)
52 COG0075 Serine-pyruvate aminot 100.0 3.4E-26 7.3E-31 216.2 29.5 340 91-479 19-363 (383)
53 COG0436 Aspartate/tyrosine/aro 100.0 7.6E-26 1.7E-30 221.0 32.9 331 84-479 42-391 (393)
54 PRK12566 glycine dehydrogenase 100.0 5E-26 1.1E-30 235.3 32.2 384 49-479 477-876 (954)
55 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 5.3E-25 1.2E-29 216.0 34.5 311 114-480 53-369 (370)
56 PTZ00094 serine hydroxymethylt 99.9 1.4E-25 3.1E-30 224.9 27.5 313 106-478 74-407 (452)
57 PLN02721 threonine aldolase 99.9 2.4E-24 5.2E-29 210.9 29.5 302 115-480 43-353 (353)
58 COG1168 MalY Bifunctional PLP- 99.9 1.2E-23 2.6E-28 193.1 29.2 327 90-479 44-386 (388)
59 PRK03080 phosphoserine aminotr 99.9 1.6E-24 3.6E-29 212.6 25.5 314 107-479 43-373 (378)
60 PRK06207 aspartate aminotransf 99.9 7.5E-23 1.6E-27 203.0 37.4 314 102-479 72-402 (405)
61 TIGR01822 2am3keto_CoA 2-amino 99.9 1.1E-23 2.4E-28 209.1 30.6 303 111-479 82-389 (393)
62 PRK06108 aspartate aminotransf 99.9 2.4E-23 5.3E-28 206.0 32.7 324 89-478 42-381 (382)
63 PRK08361 aspartate aminotransf 99.9 1.8E-23 3.9E-28 207.1 31.1 327 88-480 50-391 (391)
64 PRK07179 hypothetical protein; 99.9 1.1E-23 2.3E-28 209.7 28.9 293 114-479 101-398 (407)
65 PRK07324 transaminase; Validat 99.9 6.6E-23 1.4E-27 201.3 32.5 310 97-479 51-370 (373)
66 COG0156 BioF 7-keto-8-aminopel 99.9 1.7E-23 3.6E-28 200.0 26.9 338 68-476 42-387 (388)
67 PRK05957 aspartate aminotransf 99.9 7.8E-23 1.7E-27 202.2 32.7 327 89-479 45-385 (389)
68 cd06454 KBL_like KBL_like; thi 99.9 4.9E-23 1.1E-27 201.4 30.7 300 110-476 44-348 (349)
69 PRK05367 glycine dehydrogenase 99.9 2.7E-23 5.9E-28 220.7 30.9 372 34-474 42-437 (954)
70 cd00609 AAT_like Aspartate ami 99.9 3.7E-23 8.1E-28 202.2 29.5 318 95-475 23-350 (350)
71 PRK05937 8-amino-7-oxononanoat 99.9 4.3E-23 9.3E-28 202.5 29.8 337 68-479 7-350 (370)
72 cd06502 TA_like Low-specificit 99.9 7.5E-24 1.6E-28 206.2 23.7 299 113-475 33-337 (338)
73 PRK05764 aspartate aminotransf 99.9 9.7E-23 2.1E-27 202.3 32.0 330 89-479 49-391 (393)
74 PLN02483 serine palmitoyltrans 99.9 1.3E-22 2.8E-27 204.5 31.7 347 69-479 104-466 (489)
75 PLN00175 aminotransferase fami 99.9 2.3E-22 5E-27 199.8 33.0 325 89-478 72-412 (413)
76 cd00611 PSAT_like Phosphoserin 99.9 9E-24 2E-28 205.7 21.2 336 78-477 3-354 (355)
77 COG2008 GLY1 Threonine aldolas 99.9 3.4E-23 7.3E-28 189.9 22.9 309 99-477 26-341 (342)
78 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.7E-22 3.7E-27 197.7 29.7 301 116-474 22-352 (352)
79 PLN00145 tyrosine/nicotianamin 99.9 3.4E-22 7.4E-27 199.3 32.1 319 103-478 89-423 (430)
80 PLN02414 glycine dehydrogenase 99.9 7.9E-23 1.7E-27 216.0 28.7 359 35-475 68-465 (993)
81 PLN02187 rooty/superroot1 99.9 5.4E-22 1.2E-26 199.2 33.1 318 102-478 102-437 (462)
82 PRK06290 aspartate aminotransf 99.9 5.8E-22 1.3E-26 196.4 32.8 313 108-479 81-405 (410)
83 PLN02376 1-aminocyclopropane-1 99.9 3.5E-22 7.6E-27 201.4 31.4 322 104-478 90-437 (496)
84 COG1103 Archaea-specific pyrid 99.9 9E-23 2E-27 177.3 23.1 310 117-479 66-380 (382)
85 PRK07682 hypothetical protein; 99.9 3.5E-22 7.7E-27 197.1 30.7 312 102-479 51-376 (378)
86 PRK14807 histidinol-phosphate 99.9 8.6E-22 1.9E-26 192.1 32.0 288 115-477 62-350 (351)
87 cd00378 SHMT Serine-glycine hy 99.9 1.9E-22 4E-27 200.9 27.6 309 106-478 59-384 (402)
88 KOG1368|consensus 99.9 6.1E-23 1.3E-27 180.8 20.4 306 101-475 49-364 (384)
89 PRK07681 aspartate aminotransf 99.9 1.6E-21 3.5E-26 193.5 33.4 321 89-476 50-385 (399)
90 PLN02656 tyrosine transaminase 99.9 1E-21 2.2E-26 195.3 31.1 330 88-478 52-402 (409)
91 PRK09082 methionine aminotrans 99.9 7.6E-22 1.7E-26 195.0 29.7 322 91-476 50-386 (386)
92 TIGR01437 selA_rel uncharacter 99.9 1.9E-21 4.1E-26 189.6 31.9 301 111-477 44-363 (363)
93 PRK08960 hypothetical protein; 99.9 1.1E-21 2.3E-26 194.2 30.5 325 85-478 47-386 (387)
94 TIGR01141 hisC histidinol-phos 99.9 5.6E-22 1.2E-26 193.5 27.8 286 115-474 57-346 (346)
95 PRK08912 hypothetical protein; 99.9 2.5E-21 5.4E-26 191.6 32.5 315 102-478 57-385 (387)
96 PTZ00433 tyrosine aminotransfe 99.9 3E-21 6.5E-26 192.3 33.1 331 85-479 51-408 (412)
97 PLN00143 tyrosine/nicotianamin 99.9 4.2E-21 9.1E-26 190.8 33.6 325 91-478 56-403 (409)
98 PRK07309 aromatic amino acid a 99.9 4.4E-21 9.6E-26 189.8 33.7 327 90-479 49-388 (391)
99 PRK13034 serine hydroxymethylt 99.9 7.9E-22 1.7E-26 195.5 28.3 308 107-478 69-391 (416)
100 KOG2862|consensus 99.9 2.6E-21 5.7E-26 171.6 28.1 347 78-478 21-381 (385)
101 PTZ00377 alanine aminotransfer 99.9 3.2E-21 7E-26 195.4 33.0 331 101-479 108-475 (481)
102 TIGR03537 DapC succinyldiamino 99.9 4.2E-21 9.1E-26 187.3 32.7 309 102-476 30-350 (350)
103 PRK06225 aspartate aminotransf 99.9 1.5E-21 3.2E-26 192.8 29.8 296 115-479 69-376 (380)
104 PLN02450 1-aminocyclopropane-1 99.9 2.5E-21 5.3E-26 194.7 31.7 321 104-479 82-430 (468)
105 TIGR01821 5aminolev_synth 5-am 99.9 1.2E-21 2.6E-26 194.8 28.9 300 112-479 90-396 (402)
106 PLN02822 serine palmitoyltrans 99.9 7.1E-21 1.5E-25 191.5 34.5 313 110-479 152-477 (481)
107 TIGR03540 DapC_direct LL-diami 99.9 5.7E-21 1.2E-25 188.9 33.1 310 102-475 61-382 (383)
108 PRK06939 2-amino-3-ketobutyrat 99.9 1.7E-21 3.7E-26 193.9 29.4 304 109-479 84-393 (397)
109 PRK06107 aspartate aminotransf 99.9 3.4E-21 7.4E-26 191.3 31.4 337 89-480 51-401 (402)
110 PRK06348 aspartate aminotransf 99.9 6.6E-21 1.4E-25 188.2 33.2 325 86-476 45-382 (384)
111 PRK13392 5-aminolevulinate syn 99.9 1.8E-21 3.9E-26 194.0 29.4 299 114-479 93-397 (410)
112 PRK12414 putative aminotransfe 99.9 2.8E-21 6E-26 190.8 30.5 321 91-475 49-383 (384)
113 PRK01688 histidinol-phosphate 99.9 2E-22 4.4E-27 196.3 22.0 286 115-474 60-351 (351)
114 COG1003 GcvP Glycine cleavage 99.9 4.2E-21 9.2E-26 178.1 29.1 389 43-479 37-447 (496)
115 KOG0259|consensus 99.9 6.9E-21 1.5E-25 173.6 29.9 351 71-478 69-432 (447)
116 TIGR01265 tyr_nico_aTase tyros 99.9 1.4E-20 3E-25 187.0 34.9 330 89-479 53-401 (403)
117 PRK05942 aspartate aminotransf 99.9 9.8E-21 2.1E-25 187.7 33.7 328 85-476 50-389 (394)
118 PRK08068 transaminase; Reviewe 99.9 9.3E-21 2E-25 187.6 33.4 318 90-475 51-385 (389)
119 PRK13580 serine hydroxymethylt 99.9 1.3E-21 2.8E-26 191.5 26.5 326 105-478 88-444 (493)
120 PRK08363 alanine aminotransfer 99.9 4.8E-21 1E-25 190.2 31.2 329 89-479 51-394 (398)
121 PRK00011 glyA serine hydroxyme 99.9 2.5E-21 5.4E-26 193.5 29.1 308 108-478 67-388 (416)
122 PRK07337 aminotransferase; Val 99.9 4.9E-21 1.1E-25 189.6 30.8 322 90-477 49-387 (388)
123 PRK05958 8-amino-7-oxononanoat 99.9 2.3E-21 5E-26 192.2 28.6 297 111-476 83-384 (385)
124 PRK05387 histidinol-phosphate 99.9 4.4E-21 9.5E-26 187.7 29.9 287 115-478 63-352 (353)
125 PRK09064 5-aminolevulinate syn 99.9 3E-21 6.6E-26 192.3 29.0 301 111-479 90-397 (407)
126 PRK13355 bifunctional HTH-doma 99.9 5.6E-21 1.2E-25 195.3 31.4 331 85-478 164-513 (517)
127 COG0399 WecE Predicted pyridox 99.9 1.3E-20 2.8E-25 178.7 31.4 318 107-479 33-373 (374)
128 PLN02607 1-aminocyclopropane-1 99.9 3.3E-21 7.2E-26 192.3 28.9 317 107-478 94-436 (447)
129 PRK07550 hypothetical protein; 99.9 1.9E-20 4.2E-25 185.2 33.5 322 89-476 47-384 (386)
130 PLN03026 histidinol-phosphate 99.9 5.4E-21 1.2E-25 188.1 29.1 288 115-476 89-379 (380)
131 PRK07683 aminotransferase A; V 99.9 1.8E-20 3.8E-25 185.3 32.5 325 89-478 46-382 (387)
132 TIGR01366 serC_3 phosphoserine 99.9 1.2E-21 2.7E-26 190.6 23.8 312 106-480 35-361 (361)
133 PRK08636 aspartate aminotransf 99.9 3.4E-20 7.3E-25 184.3 34.5 338 85-479 48-400 (403)
134 PRK13393 5-aminolevulinate syn 99.9 1.2E-20 2.5E-25 187.8 30.8 299 112-479 90-396 (406)
135 PRK04870 histidinol-phosphate 99.9 1.2E-20 2.6E-25 184.7 29.9 287 115-476 66-355 (356)
136 PRK13238 tnaA tryptophanase/L- 99.9 1.1E-20 2.5E-25 188.3 30.1 323 101-478 71-432 (460)
137 PRK09276 LL-diaminopimelate am 99.9 3E-20 6.4E-25 183.9 33.0 321 89-475 49-384 (385)
138 PLN03226 serine hydroxymethylt 99.9 5.8E-21 1.3E-25 190.7 27.7 320 108-478 76-418 (475)
139 COG3844 Kynureninase [Amino ac 99.9 3.8E-21 8.1E-26 171.8 23.3 315 108-479 72-402 (407)
140 PLN02231 alanine transaminase 99.9 3.2E-20 7E-25 188.3 33.4 333 101-479 161-527 (534)
141 PRK04635 histidinol-phosphate 99.9 1.8E-21 3.8E-26 190.1 23.2 285 115-476 63-352 (354)
142 PRK03158 histidinol-phosphate 99.9 9.2E-21 2E-25 185.8 28.4 286 116-476 68-358 (359)
143 PRK02731 histidinol-phosphate 99.9 1.4E-20 3E-25 185.1 29.6 290 116-478 71-365 (367)
144 PRK08056 threonine-phosphate d 99.9 6.2E-21 1.4E-25 186.4 26.9 289 115-478 58-354 (356)
145 PRK09105 putative aminotransfe 99.9 1.5E-20 3.2E-25 184.2 29.5 285 114-478 80-369 (370)
146 PLN03227 serine palmitoyltrans 99.9 4.3E-20 9.4E-25 181.8 32.7 310 113-479 44-382 (392)
147 PRK07777 aminotransferase; Val 99.9 3.1E-20 6.7E-25 183.8 31.8 323 93-478 46-385 (387)
148 PRK05166 histidinol-phosphate 99.9 1.3E-20 2.8E-25 185.2 28.7 290 116-478 75-370 (371)
149 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.5E-20 3.2E-25 186.3 29.1 308 104-479 70-381 (385)
150 TIGR01364 serC_1 phosphoserine 99.9 2.4E-21 5.2E-26 187.2 22.8 303 107-479 32-348 (349)
151 PRK15481 transcriptional regul 99.9 1.9E-20 4.1E-25 187.8 30.1 303 104-478 117-430 (431)
152 TIGR01264 tyr_amTase_E tyrosin 99.9 4.5E-20 9.8E-25 183.4 32.6 327 89-480 53-400 (401)
153 PRK07568 aspartate aminotransf 99.9 3.6E-20 7.9E-25 184.2 31.8 324 89-479 48-392 (397)
154 PRK09147 succinyldiaminopimela 99.9 5.5E-20 1.2E-24 182.5 33.0 323 89-478 47-395 (396)
155 TIGR03588 PseC UDP-4-keto-6-de 99.9 4.2E-20 9.1E-25 182.2 31.5 314 116-477 33-380 (380)
156 PRK03317 histidinol-phosphate 99.9 2.5E-20 5.3E-25 183.2 29.7 294 108-478 65-363 (368)
157 KOG0256|consensus 99.9 9.6E-21 2.1E-25 174.3 24.4 321 108-478 121-460 (471)
158 PRK05355 3-phosphoserine/phosp 99.9 2.2E-21 4.8E-26 188.4 21.4 305 107-478 43-357 (360)
159 PRK07366 succinyldiaminopimela 99.9 7.3E-20 1.6E-24 181.2 32.7 324 90-476 49-387 (388)
160 COG0001 HemL Glutamate-1-semia 99.9 9.2E-20 2E-24 172.6 30.6 316 110-479 91-428 (432)
161 PRK00950 histidinol-phosphate 99.9 3.2E-20 7E-25 182.2 28.7 286 115-478 72-361 (361)
162 TIGR00858 bioF 8-amino-7-oxono 99.9 3.2E-20 6.8E-25 182.3 28.7 295 111-474 60-360 (360)
163 PRK06836 aspartate aminotransf 99.9 8.7E-20 1.9E-24 180.8 31.9 325 89-479 51-391 (394)
164 PRK09265 aminotransferase AlaT 99.9 6.8E-20 1.5E-24 182.3 31.2 319 102-478 66-400 (404)
165 KOG0257|consensus 99.9 1.3E-20 2.8E-25 175.0 23.9 350 76-475 36-415 (420)
166 PRK06855 aminotransferase; Val 99.9 1E-19 2.3E-24 181.9 32.4 342 88-479 52-429 (433)
167 PRK09148 aminotransferase; Val 99.9 1E-19 2.2E-24 180.8 31.7 316 102-478 62-389 (405)
168 PF00155 Aminotran_1_2: Aminot 99.9 1.2E-20 2.7E-25 185.4 24.6 312 101-473 37-363 (363)
169 PRK02610 histidinol-phosphate 99.9 1E-19 2.2E-24 179.0 31.0 299 108-480 66-372 (374)
170 COG4992 ArgD Ornithine/acetylo 99.9 3.8E-20 8.2E-25 173.4 26.3 298 112-479 84-398 (404)
171 PLN02955 8-amino-7-oxononanoat 99.9 8.6E-20 1.9E-24 178.6 29.6 311 110-478 145-460 (476)
172 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7.1E-20 1.5E-24 179.9 29.1 317 107-477 32-377 (379)
173 PRK10534 L-threonine aldolase; 99.9 2.7E-20 5.8E-25 180.6 25.7 299 103-478 29-332 (333)
174 PRK06358 threonine-phosphate d 99.9 6.8E-20 1.5E-24 178.8 27.8 287 115-477 57-353 (354)
175 TIGR00461 gcvP glycine dehydro 99.9 1.6E-19 3.4E-24 188.7 32.0 370 34-474 30-426 (939)
176 TIGR03538 DapC_gpp succinyldia 99.9 2.7E-19 5.9E-24 177.3 32.4 320 88-476 45-392 (393)
177 PRK04781 histidinol-phosphate 99.9 9.2E-20 2E-24 178.4 28.1 292 115-478 62-362 (364)
178 PF02347 GDC-P: Glycine cleava 99.9 7.3E-20 1.6E-24 175.9 26.3 373 33-473 30-429 (429)
179 PLN02271 serine hydroxymethylt 99.9 8E-20 1.7E-24 179.4 27.0 324 106-478 188-539 (586)
180 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.5E-19 3.2E-24 174.5 28.5 331 54-477 8-345 (346)
181 PRK07908 hypothetical protein; 99.9 1.1E-19 2.3E-24 177.3 27.4 281 116-478 62-346 (349)
182 PRK03244 argD acetylornithine 99.9 2.8E-19 6.1E-24 177.7 30.9 291 115-479 88-394 (398)
183 cd00615 Orn_deC_like Ornithine 99.9 6.4E-21 1.4E-25 181.0 18.1 171 113-309 60-236 (294)
184 PRK08175 aminotransferase; Val 99.9 9.2E-19 2E-23 173.6 34.1 334 85-479 44-389 (395)
185 PRK08153 histidinol-phosphate 99.9 2.2E-19 4.8E-24 176.2 29.3 290 116-478 71-364 (369)
186 PRK06425 histidinol-phosphate 99.9 2.7E-19 5.9E-24 173.1 29.2 283 115-477 43-331 (332)
187 PRK08133 O-succinylhomoserine 99.9 2.1E-19 4.5E-24 176.7 28.5 217 114-393 63-284 (390)
188 cd00617 Tnase_like Tryptophana 99.9 2.7E-19 5.7E-24 175.9 29.0 348 75-478 22-407 (431)
189 TIGR01328 met_gam_lyase methio 99.9 1.2E-19 2.5E-24 178.4 26.4 222 107-393 58-284 (391)
190 PRK01533 histidinol-phosphate 99.9 1.5E-19 3.2E-24 176.7 27.1 280 116-478 68-354 (366)
191 cd00610 OAT_like Acetyl ornith 99.9 3.8E-19 8.2E-24 177.9 30.2 315 110-477 77-413 (413)
192 PRK05968 hypothetical protein; 99.9 1.3E-19 2.8E-24 178.1 26.2 216 116-395 67-288 (389)
193 cd00614 CGS_like CGS_like: Cys 99.9 8.7E-20 1.9E-24 178.7 24.8 221 106-393 38-264 (369)
194 COG1167 ARO8 Transcriptional r 99.9 7.9E-19 1.7E-23 175.7 31.7 316 102-479 126-455 (459)
195 PRK08861 cystathionine gamma-s 99.9 2.2E-19 4.7E-24 175.2 26.9 223 106-392 51-276 (388)
196 COG0079 HisC Histidinol-phosph 99.9 1.2E-18 2.7E-23 167.4 30.6 288 115-479 60-354 (356)
197 PRK00854 rocD ornithine--oxo-a 99.9 8.6E-19 1.9E-23 174.4 30.7 301 112-478 83-400 (401)
198 PRK07504 O-succinylhomoserine 99.9 4.7E-19 1E-23 174.5 28.4 213 116-390 69-286 (398)
199 PRK06767 methionine gamma-lyas 99.9 1.9E-19 4.1E-24 177.0 25.6 235 106-404 59-307 (386)
200 PRK08064 cystathionine beta-ly 99.9 2.1E-19 4.7E-24 176.6 25.5 211 116-390 58-274 (390)
201 TIGR02379 ECA_wecE TDP-4-keto- 99.9 7.2E-19 1.6E-23 171.9 28.9 311 114-477 33-375 (376)
202 PRK03321 putative aminotransfe 99.9 3.9E-19 8.5E-24 173.8 26.8 287 115-479 60-351 (352)
203 PLN02368 alanine transaminase 99.9 7.7E-19 1.7E-23 173.0 28.8 278 85-403 82-393 (407)
204 COG0160 GabT 4-aminobutyrate a 99.8 7.6E-18 1.7E-22 162.9 34.3 318 112-479 99-445 (447)
205 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.9E-19 1.1E-23 173.2 26.4 308 107-474 24-363 (363)
206 PLN02672 methionine S-methyltr 99.8 1.6E-18 3.5E-23 183.9 32.0 319 111-478 733-1079(1082)
207 PRK09028 cystathionine beta-ly 99.8 9.8E-19 2.1E-23 170.4 27.8 218 107-392 60-283 (394)
208 PRK07590 L,L-diaminopimelate a 99.8 1.7E-18 3.7E-23 172.5 30.3 312 102-476 70-408 (409)
209 PRK04073 rocD ornithine--oxo-a 99.8 2E-18 4.3E-23 171.1 30.0 297 112-477 82-395 (396)
210 PRK06234 methionine gamma-lyas 99.8 1.3E-18 2.8E-23 171.7 28.4 221 106-392 62-290 (400)
211 PRK08045 cystathionine gamma-s 99.8 1.3E-18 2.8E-23 170.4 27.5 217 116-392 56-275 (386)
212 TIGR01140 L_thr_O3P_dcar L-thr 99.8 7.6E-19 1.6E-23 169.8 25.6 275 115-474 50-330 (330)
213 PLN02509 cystathionine beta-ly 99.8 9E-19 2E-23 173.6 26.5 216 113-392 134-355 (464)
214 PRK08776 cystathionine gamma-s 99.8 1.8E-18 3.9E-23 170.3 28.5 214 116-392 64-283 (405)
215 PRK07050 cystathionine beta-ly 99.8 2.6E-19 5.7E-24 175.9 21.8 217 116-395 69-291 (394)
216 PRK08574 cystathionine gamma-s 99.8 1.2E-18 2.7E-23 170.6 26.4 221 106-391 51-274 (385)
217 PRK08249 cystathionine gamma-s 99.8 2.3E-18 5.1E-23 169.3 28.3 220 106-392 62-286 (398)
218 PRK08134 O-acetylhomoserine am 99.8 3E-19 6.5E-24 176.7 21.8 235 116-392 68-319 (433)
219 PRK07811 cystathionine gamma-s 99.8 2.2E-18 4.8E-23 169.3 27.3 217 116-392 65-284 (388)
220 PRK05839 hypothetical protein; 99.8 6.8E-18 1.5E-22 166.0 30.8 312 88-478 41-373 (374)
221 TIGR01325 O_suc_HS_sulf O-succ 99.8 2.2E-18 4.8E-23 169.1 27.1 215 115-392 57-276 (380)
222 PRK08114 cystathionine beta-ly 99.8 2E-18 4.3E-23 167.7 26.3 219 106-392 60-286 (395)
223 TIGR01324 cysta_beta_ly_B cyst 99.8 3.5E-18 7.5E-23 166.6 28.0 218 106-391 48-271 (377)
224 TIGR02080 O_succ_thio_ly O-suc 99.8 2.8E-18 6E-23 168.0 27.1 217 116-392 55-274 (382)
225 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 2.3E-18 5.1E-23 169.1 26.8 307 113-477 32-374 (375)
226 TIGR03246 arg_catab_astC succi 99.8 6.8E-18 1.5E-22 167.0 30.0 302 112-479 77-395 (397)
227 TIGR03801 asp_4_decarbox aspar 99.8 3E-18 6.4E-23 171.4 27.5 364 85-479 108-516 (521)
228 PRK08248 O-acetylhomoserine am 99.8 3E-18 6.5E-23 169.8 27.3 240 106-392 62-319 (431)
229 PRK05613 O-acetylhomoserine am 99.8 3.5E-18 7.6E-23 169.0 27.6 237 115-392 72-328 (437)
230 PRK07269 cystathionine gamma-s 99.8 4.9E-19 1.1E-23 172.0 21.1 233 106-404 52-287 (364)
231 PRK14809 histidinol-phosphate 99.8 8.9E-18 1.9E-22 164.4 30.2 282 116-478 69-356 (357)
232 PRK07392 threonine-phosphate d 99.8 1.6E-17 3.5E-22 162.7 31.4 288 116-478 61-358 (360)
233 PRK07865 N-succinyldiaminopime 99.8 8.8E-18 1.9E-22 164.9 29.7 295 103-474 57-363 (364)
234 PRK03967 histidinol-phosphate 99.8 1.3E-17 2.9E-22 161.5 29.8 273 116-478 59-333 (337)
235 PRK06084 O-acetylhomoserine am 99.8 8.7E-18 1.9E-22 166.4 28.9 237 116-392 62-314 (425)
236 PTZ00376 aspartate aminotransf 99.8 4.1E-18 8.9E-23 169.3 26.7 325 89-479 52-403 (404)
237 PRK08247 cystathionine gamma-s 99.8 9E-19 1.9E-23 171.1 21.3 225 116-404 56-287 (366)
238 PRK01278 argD acetylornithine 99.8 1.3E-17 2.7E-22 165.2 29.6 305 112-480 73-389 (389)
239 PRK14808 histidinol-phosphate 99.8 1.2E-17 2.5E-22 161.6 28.7 270 117-476 61-334 (335)
240 PLN02242 methionine gamma-lyas 99.8 5.4E-18 1.2E-22 167.5 26.7 222 106-392 74-302 (418)
241 PRK09275 aspartate aminotransf 99.8 5E-18 1.1E-22 170.0 26.6 365 85-479 114-517 (527)
242 TIGR03539 DapC_actino succinyl 99.8 1.4E-17 3.1E-22 162.8 29.3 291 103-473 51-356 (357)
243 COG0112 GlyA Glycine/serine hy 99.8 4.2E-18 9.1E-23 157.3 23.7 313 103-479 63-390 (413)
244 PRK07505 hypothetical protein; 99.8 1.1E-17 2.3E-22 166.3 28.6 302 110-478 89-398 (402)
245 PRK07582 cystathionine gamma-l 99.8 3.1E-18 6.8E-23 167.1 24.2 217 106-393 49-271 (366)
246 PRK07812 O-acetylhomoserine am 99.8 7.7E-18 1.7E-22 166.5 27.0 234 116-392 73-323 (436)
247 PRK15407 lipopolysaccharide bi 99.8 2.4E-17 5.3E-22 163.8 30.7 324 116-478 67-435 (438)
248 TIGR01329 cysta_beta_ly_E cyst 99.8 9E-19 2E-23 171.5 19.5 213 114-390 49-267 (378)
249 TIGR01885 Orn_aminotrans ornit 99.8 5E-17 1.1E-21 161.5 32.2 306 111-477 78-400 (401)
250 PRK07503 methionine gamma-lyas 99.8 1.7E-18 3.8E-23 170.8 21.4 215 116-392 69-289 (403)
251 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.9E-19 4E-24 173.4 14.1 233 113-395 67-329 (417)
252 PRK09257 aromatic amino acid a 99.8 1.2E-17 2.6E-22 165.7 27.5 318 87-476 47-395 (396)
253 PTZ00125 ornithine aminotransf 99.8 1.9E-17 4.1E-22 164.8 29.0 305 112-479 73-395 (400)
254 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.1E-17 2.4E-22 161.5 25.7 349 74-478 39-425 (450)
255 PRK03715 argD acetylornithine 99.8 1.9E-17 4.2E-22 162.9 27.7 306 111-480 77-394 (395)
256 PRK05994 O-acetylhomoserine am 99.8 2.2E-17 4.8E-22 163.9 28.0 234 116-392 67-318 (427)
257 PRK07810 O-succinylhomoserine 99.8 4.7E-18 1E-22 167.4 22.4 221 106-393 68-294 (403)
258 PRK09440 avtA valine--pyruvate 99.8 4E-17 8.6E-22 163.2 29.3 333 87-479 48-411 (416)
259 PRK05964 adenosylmethionine--8 99.8 1.2E-16 2.7E-21 159.3 32.4 318 111-480 84-423 (423)
260 PRK02936 argD acetylornithine 99.8 5.7E-17 1.2E-21 160.0 29.7 291 111-476 70-376 (377)
261 KOG1360|consensus 99.8 2.1E-17 4.5E-22 151.6 24.2 299 110-477 218-522 (570)
262 PRK06460 hypothetical protein; 99.8 2.8E-17 6E-22 160.9 26.9 213 116-392 49-267 (376)
263 PRK02627 acetylornithine amino 99.8 9.9E-17 2.1E-21 159.5 31.3 304 111-479 80-394 (396)
264 PF00464 SHMT: Serine hydroxym 99.8 4.9E-18 1.1E-22 162.9 20.9 306 105-473 59-399 (399)
265 TIGR00707 argD acetylornithine 99.8 9.4E-17 2E-21 158.8 30.9 299 112-476 69-378 (379)
266 cd01494 AAT_I Aspartate aminot 99.8 8.1E-19 1.8E-23 152.7 14.2 164 116-307 4-170 (170)
267 PRK08637 hypothetical protein; 99.8 6.6E-17 1.4E-21 159.9 29.5 331 89-480 25-387 (388)
268 PRK15029 arginine decarboxylas 99.8 3.2E-17 6.9E-22 169.3 27.7 177 113-309 206-402 (755)
269 TIGR03372 putres_am_tran putre 99.8 2.9E-16 6.3E-21 155.6 33.5 308 111-476 116-441 (442)
270 PRK06176 cystathionine gamma-s 99.8 2.7E-17 5.8E-22 160.9 25.6 218 107-392 49-272 (380)
271 COG0403 GcvP Glycine cleavage 99.8 8.2E-17 1.8E-21 150.1 27.2 365 49-477 55-448 (450)
272 PRK11522 putrescine--2-oxoglut 99.8 1.5E-16 3.2E-21 158.8 31.3 311 111-479 123-451 (459)
273 PLN02624 ornithine-delta-amino 99.8 2.1E-16 4.4E-21 159.1 32.4 309 111-478 116-443 (474)
274 PRK13237 tyrosine phenol-lyase 99.8 3.3E-17 7.2E-22 158.8 25.3 349 74-478 46-432 (460)
275 TIGR03542 DAPAT_plant LL-diami 99.8 1.5E-16 3.3E-21 158.1 30.7 309 103-476 70-401 (402)
276 PRK05939 hypothetical protein; 99.8 1.4E-17 3E-22 163.6 22.4 240 106-392 45-290 (397)
277 TIGR01365 serC_2 phosphoserine 99.8 5.8E-17 1.3E-21 156.5 25.7 321 105-476 32-370 (374)
278 PRK05967 cystathionine beta-ly 99.8 6.7E-17 1.5E-21 157.2 26.2 214 115-392 67-286 (395)
279 PRK06541 hypothetical protein; 99.8 4.8E-16 1E-20 155.6 32.8 330 111-479 94-455 (460)
280 PRK07671 cystathionine beta-ly 99.8 1.1E-17 2.4E-22 163.6 20.2 215 115-393 53-273 (377)
281 PRK04311 selenocysteine syntha 99.8 3.7E-16 8E-21 155.1 31.2 167 115-313 130-311 (464)
282 PRK05664 threonine-phosphate d 99.8 1.9E-16 4E-21 153.0 28.5 272 115-479 52-328 (330)
283 PLN02760 4-aminobutyrate:pyruv 99.8 6.4E-16 1.4E-20 155.8 32.9 328 111-479 132-491 (504)
284 PRK05093 argD bifunctional N-s 99.8 3.7E-16 8.1E-21 155.3 30.8 302 114-479 84-400 (403)
285 TIGR00474 selA seryl-tRNA(sec) 99.8 1.8E-16 3.9E-21 156.9 28.2 168 114-313 124-306 (454)
286 PRK12381 bifunctional succinyl 99.8 1.6E-16 3.4E-21 157.8 27.8 302 112-479 81-399 (406)
287 PRK08117 4-aminobutyrate amino 99.8 6.7E-16 1.5E-20 154.5 32.6 316 111-479 85-429 (433)
288 KOG1357|consensus 99.8 2.1E-17 4.5E-22 154.2 20.0 345 69-478 140-501 (519)
289 PRK06062 hypothetical protein; 99.8 8.5E-16 1.8E-20 153.5 33.1 320 111-479 94-445 (451)
290 PRK08354 putative aminotransfe 99.8 1.8E-16 3.9E-21 151.9 27.0 149 116-306 44-196 (311)
291 PRK12403 putative aminotransfe 99.8 1.5E-15 3.4E-20 152.1 33.5 326 111-479 97-452 (460)
292 PRK13360 omega amino acid--pyr 99.8 9.5E-16 2.1E-20 152.8 31.7 319 112-479 89-440 (442)
293 PRK06959 putative threonine-ph 99.8 3.9E-16 8.4E-21 151.2 27.8 272 115-479 56-333 (339)
294 TIGR02407 ectoine_ectB diamino 99.8 8.9E-16 1.9E-20 152.2 30.9 310 111-479 77-412 (412)
295 PLN02452 phosphoserine transam 99.8 1.1E-16 2.3E-21 154.7 23.4 336 74-478 7-362 (365)
296 COG2873 MET17 O-acetylhomoseri 99.8 2.9E-16 6.2E-21 143.7 24.2 242 105-393 59-318 (426)
297 PLN02397 aspartate transaminas 99.8 3.2E-16 6.9E-21 156.3 26.9 307 102-478 85-420 (423)
298 PRK04260 acetylornithine amino 99.8 1.1E-15 2.4E-20 150.5 30.5 292 111-476 69-374 (375)
299 PRK08360 4-aminobutyrate amino 99.8 2.7E-15 5.9E-20 149.6 33.5 315 112-479 84-426 (443)
300 PRK06058 4-aminobutyrate amino 99.8 4.2E-15 9E-20 148.8 34.8 319 111-480 98-443 (443)
301 KOG0634|consensus 99.8 1.2E-15 2.6E-20 142.1 27.7 333 102-479 94-466 (472)
302 KOG1359|consensus 99.8 4.4E-16 9.5E-21 137.5 23.5 299 109-478 109-411 (417)
303 PRK06105 aminotransferase; Pro 99.8 2.2E-15 4.9E-20 150.9 32.0 327 111-479 91-449 (460)
304 PRK06702 O-acetylhomoserine am 99.8 6.9E-17 1.5E-21 158.8 20.7 242 107-393 60-317 (432)
305 PRK05965 hypothetical protein; 99.8 3.4E-15 7.3E-20 149.6 32.9 328 111-479 89-447 (459)
306 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 7.4E-17 1.6E-21 160.1 20.5 235 115-393 60-312 (418)
307 PLN02482 glutamate-1-semialdeh 99.7 1.1E-15 2.5E-20 152.6 28.6 314 111-480 138-474 (474)
308 PRK09221 beta alanine--pyruvat 99.7 2.1E-15 4.5E-20 150.5 30.1 322 112-479 92-443 (445)
309 PRK13578 ornithine decarboxyla 99.7 1.9E-16 4.2E-21 161.8 22.8 312 114-477 176-563 (720)
310 PRK15399 lysine decarboxylase 99.7 1.2E-15 2.7E-20 155.8 28.6 310 114-477 197-557 (713)
311 PRK07678 aminotransferase; Val 99.7 7.4E-15 1.6E-19 147.0 33.8 330 112-480 89-450 (451)
312 PRK07049 methionine gamma-lyas 99.7 1.3E-15 2.9E-20 151.1 28.2 224 107-392 82-317 (427)
313 PLN00144 acetylornithine trans 99.7 2.5E-15 5.4E-20 147.6 29.8 306 111-479 56-380 (382)
314 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 6.5E-16 1.4E-20 149.9 25.3 220 106-392 53-280 (386)
315 PRK09264 diaminobutyrate--2-ox 99.7 2E-15 4.3E-20 150.4 29.3 309 112-479 82-416 (425)
316 PRK07482 hypothetical protein; 99.7 4.7E-15 1E-19 148.6 32.0 329 111-479 93-454 (461)
317 KOG2040|consensus 99.7 3.6E-16 7.8E-21 151.4 22.6 336 105-479 575-918 (1001)
318 PRK07480 putative aminotransfe 99.7 4.8E-15 1E-19 148.2 31.8 326 111-479 93-448 (456)
319 PRK07036 hypothetical protein; 99.7 7E-15 1.5E-19 147.5 33.0 326 111-478 94-451 (466)
320 TIGR00700 GABAtrnsam 4-aminobu 99.7 1E-14 2.2E-19 145.4 34.0 314 113-478 77-419 (420)
321 PRK08593 4-aminobutyrate amino 99.7 1.4E-14 3E-19 144.7 34.6 316 111-479 84-429 (445)
322 PRK06777 4-aminobutyrate amino 99.7 9.4E-15 2E-19 145.3 33.2 315 112-478 83-420 (421)
323 PRK05639 4-aminobutyrate amino 99.7 6.4E-15 1.4E-19 147.2 32.1 315 112-479 96-443 (457)
324 PRK15400 lysine decarboxylase 99.7 6.3E-16 1.4E-20 157.9 25.2 310 114-476 197-556 (714)
325 PRK06943 adenosylmethionine--8 99.7 9.8E-15 2.1E-19 145.9 33.1 319 112-479 97-446 (453)
326 PRK05769 4-aminobutyrate amino 99.7 2E-14 4.3E-19 143.4 35.0 313 111-479 96-439 (441)
327 PRK06173 adenosylmethionine--8 99.7 5.3E-15 1.1E-19 146.8 30.6 314 111-479 86-425 (429)
328 PRK06434 cystathionine gamma-l 99.7 7.2E-16 1.6E-20 150.0 23.5 229 106-404 62-307 (384)
329 PRK07481 hypothetical protein; 99.7 2.2E-14 4.7E-19 143.5 34.6 328 111-479 85-445 (449)
330 TIGR00709 dat 2,4-diaminobutyr 99.7 1.5E-14 3.3E-19 144.6 33.3 322 111-479 81-435 (442)
331 PRK04612 argD acetylornithine 99.7 1.2E-14 2.5E-19 143.6 31.8 305 112-479 82-403 (408)
332 PRK07495 4-aminobutyrate amino 99.7 3E-14 6.4E-19 141.5 34.5 317 111-479 82-421 (425)
333 PRK07030 adenosylmethionine--8 99.7 1.5E-14 3.2E-19 145.0 32.4 327 111-479 89-446 (466)
334 PRK09792 4-aminobutyrate trans 99.7 9.8E-15 2.1E-19 145.2 30.3 314 111-478 82-420 (421)
335 PRK06916 adenosylmethionine--8 99.7 1.6E-14 3.4E-19 144.8 31.6 326 111-479 98-455 (460)
336 PRK06938 diaminobutyrate--2-ox 99.7 1.5E-14 3.2E-19 144.9 31.4 321 112-479 106-460 (464)
337 PRK12566 glycine dehydrogenase 99.7 3E-15 6.4E-20 156.0 27.0 367 34-474 45-439 (954)
338 PRK07986 adenosylmethionine--8 99.7 1.1E-14 2.4E-19 144.3 29.8 313 112-478 86-422 (428)
339 PRK08742 adenosylmethionine--8 99.7 2.6E-14 5.7E-19 143.1 32.4 325 112-479 107-467 (472)
340 TIGR00713 hemL glutamate-1-sem 99.7 8.5E-15 1.9E-19 146.6 28.7 314 113-480 89-423 (423)
341 PRK06917 hypothetical protein; 99.7 4.7E-14 1E-18 140.9 33.7 332 111-479 73-437 (447)
342 PF01212 Beta_elim_lyase: Beta 99.7 3.1E-17 6.7E-22 153.1 10.0 251 98-398 19-281 (290)
343 PRK12389 glutamate-1-semialdeh 99.7 2.1E-14 4.5E-19 143.1 30.6 313 111-480 92-428 (428)
344 PRK06148 hypothetical protein; 99.7 6.5E-14 1.4E-18 152.5 35.8 320 111-479 662-1010(1013)
345 PRK07483 hypothetical protein; 99.7 7.4E-14 1.6E-18 139.4 33.4 331 112-479 73-437 (443)
346 PRK04013 argD acetylornithine/ 99.7 1.5E-14 3.1E-19 140.2 27.4 282 112-479 66-360 (364)
347 PRK06931 diaminobutyrate--2-ox 99.7 5.8E-14 1.2E-18 140.6 32.5 322 111-479 100-454 (459)
348 PRK05630 adenosylmethionine--8 99.7 6.7E-14 1.5E-18 138.8 31.8 310 112-479 83-420 (422)
349 PRK06918 4-aminobutyrate amino 99.7 8.2E-14 1.8E-18 139.9 32.8 318 111-479 96-443 (451)
350 KOG1404|consensus 99.7 1E-13 2.2E-18 127.7 29.9 311 116-473 96-432 (442)
351 PRK06082 4-aminobutyrate amino 99.7 5.1E-14 1.1E-18 141.0 30.6 313 111-479 112-451 (459)
352 PRK00062 glutamate-1-semialdeh 99.7 2.4E-14 5.3E-19 142.8 28.1 312 112-479 90-424 (426)
353 TIGR00508 bioA adenosylmethion 99.7 6.2E-14 1.3E-18 139.5 30.1 311 114-479 90-426 (427)
354 PRK12462 phosphoserine aminotr 99.7 1.2E-14 2.6E-19 138.9 23.5 334 75-478 5-361 (364)
355 COG0161 BioA Adenosylmethionin 99.7 6.3E-14 1.4E-18 135.0 28.3 320 116-479 91-443 (449)
356 PRK00615 glutamate-1-semialdeh 99.7 4.4E-14 9.6E-19 140.1 27.4 314 111-479 92-428 (433)
357 KOG1402|consensus 99.7 4.3E-14 9.3E-19 127.0 24.0 305 111-478 100-426 (427)
358 PRK06149 hypothetical protein; 99.7 2.4E-13 5.1E-18 148.1 35.0 319 112-479 624-970 (972)
359 PRK08088 4-aminobutyrate amino 99.7 3E-13 6.4E-18 135.2 32.6 314 114-479 86-423 (425)
360 PRK07046 aminotransferase; Val 99.7 1.6E-13 3.6E-18 137.0 30.6 313 111-479 114-450 (453)
361 COG3977 Alanine-alpha-ketoisov 99.7 5E-14 1.1E-18 125.0 23.0 314 101-478 67-410 (417)
362 PF05889 SLA_LP_auto_ag: Solub 99.7 2.9E-14 6.3E-19 134.0 22.4 314 112-478 56-389 (389)
363 COG0626 MetC Cystathionine bet 99.6 1.3E-13 2.7E-18 132.2 25.6 225 106-393 61-289 (396)
364 TIGR02617 tnaA_trp_ase tryptop 99.6 1.6E-13 3.4E-18 131.6 26.0 347 73-478 41-440 (467)
365 TIGR00699 GABAtrns_euk 4-amino 99.6 1.6E-13 3.5E-18 136.3 27.0 310 112-476 105-463 (464)
366 PRK08297 L-lysine aminotransfe 99.6 2.4E-13 5.3E-18 135.6 27.3 319 112-480 92-442 (443)
367 TIGR03251 LAT_fam L-lysine 6-t 99.6 6.2E-13 1.3E-17 132.6 28.8 310 116-476 89-431 (431)
368 COG1982 LdcC Arginine/lysine/o 99.6 7.9E-13 1.7E-17 130.0 24.6 233 115-396 73-322 (557)
369 KOG0053|consensus 99.6 4.5E-13 9.9E-18 126.6 20.9 218 108-392 77-300 (409)
370 KOG0633|consensus 99.6 1.7E-13 3.7E-18 119.2 16.3 288 125-476 82-374 (375)
371 KOG0258|consensus 99.6 8E-12 1.7E-16 115.1 27.9 327 97-460 102-456 (475)
372 KOG3846|consensus 99.5 1.2E-12 2.7E-17 116.6 19.2 319 114-478 113-460 (465)
373 KOG1401|consensus 99.5 1.2E-11 2.6E-16 115.1 26.0 229 119-384 105-351 (433)
374 PRK06209 glutamate-1-semialdeh 99.5 3.6E-12 7.9E-17 127.1 23.1 302 112-479 88-405 (431)
375 KOG1358|consensus 99.5 2.1E-12 4.6E-17 118.9 19.4 308 111-479 142-465 (467)
376 PLN02974 adenosylmethionine-8- 99.5 5.5E-11 1.2E-15 125.3 30.5 329 112-477 409-816 (817)
377 KOG0630|consensus 99.4 6.1E-12 1.3E-16 118.8 17.7 260 112-393 165-440 (838)
378 PF00202 Aminotran_3: Aminotra 99.4 4E-11 8.7E-16 115.8 20.1 182 111-309 58-262 (339)
379 KOG2467|consensus 99.4 2.3E-10 5E-15 104.7 21.6 328 105-477 79-424 (477)
380 COG3033 TnaA Tryptophanase [Am 99.3 5.2E-10 1.1E-14 102.3 20.0 329 103-478 74-443 (471)
381 COG1921 SelA Selenocysteine sy 99.2 2.8E-09 6E-14 100.8 18.9 165 116-315 72-243 (395)
382 PF12897 Aminotran_MocR: Alani 99.1 2.8E-08 6E-13 92.8 22.4 313 116-477 73-413 (425)
383 COG1932 SerC Phosphoserine ami 99.1 1.6E-08 3.5E-13 93.7 20.5 335 76-479 7-363 (365)
384 COG1448 TyrB Aspartate/tyrosin 99.1 3.5E-08 7.5E-13 92.0 21.3 284 131-476 96-395 (396)
385 PF06838 Met_gamma_lyase: Meth 99.1 4E-08 8.6E-13 91.2 21.4 223 119-393 61-302 (403)
386 KOG1403|consensus 99.1 3.3E-08 7.2E-13 88.4 19.5 321 111-477 86-435 (452)
387 KOG2040|consensus 99.0 1.3E-07 2.8E-12 93.0 22.5 369 35-474 85-478 (1001)
388 PF03841 SelA: L-seryl-tRNA se 98.9 1.5E-09 3.4E-14 101.6 4.1 168 116-315 51-233 (367)
389 KOG3843|consensus 98.9 2.7E-08 5.8E-13 87.4 11.4 231 111-384 56-295 (432)
390 KOG1405|consensus 98.5 9.6E-06 2.1E-10 74.7 16.8 222 208-480 255-484 (484)
391 COG4100 Cystathionine beta-lya 98.3 9.9E-06 2.1E-10 73.0 12.6 166 121-314 74-255 (416)
392 KOG1412|consensus 98.0 0.00059 1.3E-08 62.1 17.5 285 131-479 101-405 (410)
393 KOG2790|consensus 97.9 0.0021 4.7E-08 57.8 18.9 341 76-478 9-367 (370)
394 PF04864 Alliinase_C: Allinase 97.8 0.0039 8.5E-08 58.2 18.7 290 111-476 46-362 (363)
395 KOG1411|consensus 97.5 0.00039 8.5E-09 64.2 8.4 283 134-478 125-424 (427)
396 PLN02994 1-aminocyclopropane-1 96.3 0.0092 2E-07 50.2 5.9 61 104-179 88-152 (153)
397 KOG0352|consensus 88.4 2.9 6.4E-05 40.6 8.7 71 197-271 85-159 (641)
398 COG2515 Acd 1-aminocyclopropan 88.0 9.8 0.00021 35.5 11.5 140 107-267 46-193 (323)
399 COG0108 RibB 3,4-dihydroxy-2-b 73.2 8.4 0.00018 33.5 5.3 48 211-259 143-190 (203)
400 PF06506 PrpR_N: Propionate ca 70.7 30 0.00064 29.8 8.4 70 168-259 79-148 (176)
401 cd01018 ZntC Metal binding pro 70.3 92 0.002 28.9 12.4 70 177-259 176-245 (266)
402 cd01137 PsaA Metal binding pro 68.9 58 0.0013 30.7 10.5 69 177-257 183-252 (287)
403 cd00951 KDGDH 5-dehydro-4-deox 68.3 13 0.00028 35.0 6.1 61 196-259 8-74 (289)
404 COG1504 Uncharacterized conser 67.5 11 0.00024 29.2 4.2 48 204-259 47-94 (121)
405 cd01455 vWA_F11C1-5a_type Von 67.1 21 0.00045 31.2 6.4 53 209-261 95-149 (191)
406 COG2870 RfaE ADP-heptose synth 66.9 9.5 0.00021 37.0 4.7 93 172-271 95-194 (467)
407 cd01017 AdcA Metal binding pro 66.8 1.1E+02 0.0024 28.7 12.0 69 177-257 177-246 (282)
408 COG0329 DapA Dihydrodipicolina 66.3 13 0.00029 35.2 5.7 63 197-259 13-78 (299)
409 smart00642 Aamy Alpha-amylase 63.1 19 0.00042 30.7 5.6 30 235-264 64-93 (166)
410 PF01297 TroA: Periplasmic sol 62.1 64 0.0014 29.7 9.3 73 170-257 152-225 (256)
411 COG1184 GCD2 Translation initi 61.8 1.5E+02 0.0032 28.1 14.8 101 128-259 118-226 (301)
412 TIGR03772 anch_rpt_subst ancho 61.4 1.2E+02 0.0027 30.8 11.7 71 177-257 377-448 (479)
413 TIGR03249 KdgD 5-dehydro-4-deo 61.2 21 0.00046 33.8 6.1 58 196-253 13-70 (296)
414 cd00950 DHDPS Dihydrodipicolin 61.0 22 0.00047 33.4 6.1 59 195-253 7-65 (284)
415 PRK03170 dihydrodipicolinate s 60.2 23 0.00049 33.5 6.1 56 194-252 7-65 (292)
416 COG1066 Sms Predicted ATP-depe 60.0 82 0.0018 31.1 9.6 133 170-312 123-276 (456)
417 cd00408 DHDPS-like Dihydrodipi 58.3 27 0.00059 32.7 6.3 61 196-259 5-71 (281)
418 COG1954 GlpP Glycerol-3-phosph 58.0 13 0.00028 31.5 3.4 49 207-266 12-62 (181)
419 PRK04147 N-acetylneuraminate l 57.8 25 0.00055 33.2 5.9 65 195-259 10-78 (293)
420 COG0300 DltE Short-chain dehyd 57.7 1.6E+02 0.0035 27.3 11.4 104 132-251 8-113 (265)
421 cd01019 ZnuA Zinc binding prot 57.6 1.7E+02 0.0037 27.5 12.5 69 177-257 185-254 (286)
422 TIGR00683 nanA N-acetylneurami 57.1 27 0.00059 32.9 6.0 61 196-259 8-75 (290)
423 PF00926 DHBP_synthase: 3,4-di 56.6 26 0.00057 30.7 5.3 48 210-258 138-185 (194)
424 TIGR02313 HpaI-NOT-DapA 2,4-di 56.2 31 0.00068 32.6 6.2 53 195-250 7-62 (294)
425 PRK03620 5-dehydro-4-deoxygluc 55.7 28 0.0006 33.1 5.8 61 196-259 15-81 (303)
426 PLN02417 dihydrodipicolinate s 55.3 32 0.00068 32.3 6.1 64 196-259 9-75 (280)
427 TIGR00674 dapA dihydrodipicoli 54.9 39 0.00084 31.8 6.7 59 195-253 5-63 (285)
428 PLN02672 methionine S-methyltr 54.1 1.6E+02 0.0035 33.4 11.9 154 87-262 405-565 (1082)
429 PRK09545 znuA high-affinity zi 54.0 2E+02 0.0044 27.4 12.0 70 177-257 209-278 (311)
430 TIGR03573 WbuX N-acetyl sugar 54.0 2.2E+02 0.0047 27.6 13.8 119 114-265 42-171 (343)
431 PF05368 NmrA: NmrA-like famil 53.8 51 0.0011 29.6 7.2 76 168-259 24-99 (233)
432 TIGR00506 ribB 3,4-dihydroxy-2 53.0 36 0.00079 29.9 5.6 47 211-258 144-190 (199)
433 COG1105 FruK Fructose-1-phosph 52.6 89 0.0019 29.7 8.4 60 205-265 110-170 (310)
434 COG0296 GlgB 1,4-alpha-glucan 51.6 12 0.00026 39.1 2.7 40 228-267 201-240 (628)
435 cd05126 Mth938 Mth938 domain. 51.4 38 0.00083 26.9 5.1 48 205-260 45-92 (117)
436 cd00954 NAL N-Acetylneuraminic 51.4 43 0.00093 31.5 6.3 62 195-259 7-75 (288)
437 PF00701 DHDPS: Dihydrodipicol 51.1 29 0.00064 32.6 5.2 64 196-259 9-75 (289)
438 KOG2865|consensus 50.5 1.2E+02 0.0025 28.5 8.4 59 194-261 110-177 (391)
439 PRK13397 3-deoxy-7-phosphohept 49.4 1.4E+02 0.003 27.4 8.9 83 177-267 110-197 (250)
440 TIGR01361 DAHP_synth_Bsub phos 49.3 2.2E+02 0.0047 26.4 10.5 82 177-266 120-206 (260)
441 PRK00910 ribB 3,4-dihydroxy-2- 48.2 48 0.001 29.6 5.6 46 212-258 156-201 (218)
442 PF02603 Hpr_kinase_N: HPr Ser 47.3 20 0.00043 29.1 2.9 47 205-259 64-110 (127)
443 cd01016 TroA Metal binding pro 46.6 1.5E+02 0.0032 27.7 9.1 74 177-259 167-241 (276)
444 PRK00014 ribB 3,4-dihydroxy-2- 46.3 52 0.0011 29.6 5.5 45 212-257 160-204 (230)
445 PRK03353 ribB 3,4-dihydroxy-2- 45.6 55 0.0012 29.3 5.6 45 212-257 155-199 (217)
446 PRK01792 ribB 3,4-dihydroxy-2- 45.2 56 0.0012 29.1 5.5 47 211-258 154-200 (214)
447 cd00952 CHBPH_aldolase Trans-o 44.8 47 0.001 31.6 5.6 57 203-259 23-82 (309)
448 TIGR03679 arCOG00187 arCOG0018 44.3 2.4E+02 0.0051 25.3 11.7 103 132-257 1-115 (218)
449 KOG0369|consensus 44.2 83 0.0018 32.9 7.2 32 238-269 168-199 (1176)
450 COG3453 Uncharacterized protei 44.1 71 0.0015 25.4 5.3 74 174-255 43-127 (130)
451 PF07071 DUF1341: Protein of u 44.0 67 0.0015 28.1 5.6 70 180-260 136-208 (218)
452 COG2099 CobK Precorrin-6x redu 42.6 38 0.00083 30.9 4.2 29 240-268 52-80 (257)
453 PF01972 SDH_sah: Serine dehyd 40.6 58 0.0013 30.2 5.0 52 234-296 98-152 (285)
454 COG1091 RfbD dTDP-4-dehydrorha 40.1 1.9E+02 0.0042 27.1 8.5 47 206-257 37-95 (281)
455 PF00128 Alpha-amylase: Alpha 39.8 18 0.00039 34.0 1.9 33 233-265 44-76 (316)
456 PF14488 DUF4434: Domain of un 37.6 1.5E+02 0.0032 25.3 6.9 57 204-260 15-84 (166)
457 PRK13396 3-deoxy-7-phosphohept 37.2 3.3E+02 0.0071 26.5 9.8 62 205-267 218-284 (352)
458 TIGR01362 KDO8P_synth 3-deoxy- 37.1 1.6E+02 0.0035 27.1 7.2 62 201-265 122-186 (258)
459 PRK09441 cytoplasmic alpha-amy 36.8 27 0.00058 35.7 2.7 32 233-264 73-104 (479)
460 cd01020 TroA_b Metal binding p 36.7 1.2E+02 0.0027 28.0 6.9 77 170-258 155-236 (264)
461 PF10087 DUF2325: Uncharacteri 36.7 1.4E+02 0.003 22.6 6.1 74 171-259 3-80 (97)
462 cd05560 Xcc1710_like Xcc1710_l 36.1 1.5E+02 0.0033 23.2 6.3 48 205-261 39-86 (109)
463 TIGR00322 diphth2_R diphthamid 35.9 71 0.0015 30.8 5.2 79 204-296 3-84 (332)
464 COG0367 AsnB Asparagine syntha 35.8 4.5E+02 0.0096 27.4 11.3 127 111-266 213-349 (542)
465 cd07492 Peptidases_S8_8 Peptid 35.6 3.2E+02 0.0068 24.2 9.7 66 194-261 62-128 (222)
466 TIGR01274 ACC_deam 1-aminocycl 35.5 2.4E+02 0.0052 27.2 8.9 75 132-221 68-150 (337)
467 TIGR01275 ACC_deam_rel pyridox 35.2 2E+02 0.0044 27.2 8.3 55 132-200 58-113 (311)
468 PF01301 Glyco_hydro_35: Glyco 35.1 81 0.0018 30.2 5.5 54 207-260 22-82 (319)
469 TIGR03581 EF_0839 conserved hy 35.0 3.2E+02 0.0069 24.4 8.4 73 180-263 136-211 (236)
470 KOG3076|consensus 34.2 2.5E+02 0.0054 24.5 7.4 20 132-151 9-28 (206)
471 TIGR00655 PurU formyltetrahydr 34.0 3.7E+02 0.0081 25.2 9.5 75 111-200 58-140 (280)
472 PF13380 CoA_binding_2: CoA bi 34.0 89 0.0019 24.7 4.7 49 207-264 64-112 (116)
473 TIGR02402 trehalose_TreZ malto 33.3 32 0.00069 35.7 2.6 34 232-265 151-184 (542)
474 PF03796 DnaB_C: DnaB-like hel 33.2 1.3E+02 0.0027 27.7 6.4 55 205-259 111-175 (259)
475 COG0386 BtuE Glutathione perox 33.1 2.6E+02 0.0056 23.5 7.2 93 195-297 28-134 (162)
476 KOG2741|consensus 33.0 2.4E+02 0.0051 27.2 7.9 24 240-264 109-132 (351)
477 TIGR00334 5S_RNA_mat_M5 ribonu 32.9 35 0.00076 29.2 2.3 54 204-268 10-63 (174)
478 PRK13398 3-deoxy-7-phosphohept 32.9 3.1E+02 0.0068 25.5 8.8 60 206-266 145-208 (266)
479 COG0031 CysK Cysteine synthase 32.7 1.9E+02 0.0042 27.3 7.3 55 130-201 63-117 (300)
480 TIGR01244 conserved hypothetic 32.7 2.7E+02 0.0059 22.6 7.8 67 183-255 51-126 (135)
481 PRK08673 3-deoxy-7-phosphohept 32.5 3.4E+02 0.0074 26.2 9.2 62 205-267 210-275 (335)
482 KOG1465|consensus 32.4 4.4E+02 0.0095 24.9 13.6 119 130-288 163-288 (353)
483 PF08659 KR: KR domain; Inter 31.9 3.2E+02 0.0068 23.4 8.3 68 169-242 27-99 (181)
484 PLN03244 alpha-amylase; Provis 31.8 37 0.0008 36.5 2.7 36 230-265 430-465 (872)
485 PF00106 adh_short: short chai 31.4 2.2E+02 0.0048 23.5 7.2 55 194-251 53-109 (167)
486 TIGR01536 asn_synth_AEB aspara 31.2 5.7E+02 0.012 25.9 12.1 125 111-262 236-364 (467)
487 TIGR00272 DPH2 diphthamide bio 31.1 1.3E+02 0.0027 30.9 6.3 86 207-307 38-130 (496)
488 CHL00073 chlN photochlorophyll 30.9 1E+02 0.0022 31.1 5.6 56 207-264 81-138 (457)
489 PRK08057 cobalt-precorrin-6x r 30.9 48 0.001 30.5 3.0 30 238-267 49-78 (248)
490 PF02594 DUF167: Uncharacteris 30.8 55 0.0012 23.8 2.7 29 112-140 40-68 (77)
491 PRK09314 bifunctional 3,4-dihy 30.5 98 0.0021 29.8 5.1 42 215-257 147-188 (339)
492 COG2052 Uncharacterized protei 30.4 1E+02 0.0022 22.1 3.8 23 242-266 29-51 (89)
493 KOG3974|consensus 30.4 52 0.0011 30.1 3.0 46 207-262 91-140 (306)
494 PF05913 DUF871: Bacterial pro 30.2 71 0.0015 31.1 4.2 60 207-266 12-72 (357)
495 PLN02828 formyltetrahydrofolat 30.2 4.6E+02 0.0099 24.4 9.8 57 132-201 73-132 (268)
496 PLN02556 cysteine synthase/L-3 30.2 2E+02 0.0042 28.3 7.3 52 132-200 114-165 (368)
497 cd01121 Sms Sms (bacterial rad 30.2 5.4E+02 0.012 25.3 10.6 80 170-259 113-205 (372)
498 cd00953 KDG_aldolase KDG (2-ke 29.9 1.1E+02 0.0025 28.5 5.5 55 197-252 9-63 (279)
499 PLN03013 cysteine synthase 29.9 2.5E+02 0.0055 28.1 8.0 53 132-201 178-230 (429)
500 PF02571 CbiJ: Precorrin-6x re 29.7 51 0.0011 30.3 3.0 23 242-264 54-76 (249)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=6.4e-81 Score=621.29 Aligned_cols=463 Identities=25% Similarity=0.369 Sum_probs=418.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhccC--CCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHh-hccCCccCCCCCccccc
Q psy12303 3 TTETFLKQLVNILLNYIKESNDR--NEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFT-TLKYQVRTGHPMFMNQL 79 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~-~~~~~~~~~~p~~~~~~ 79 (480)
+.++.+++++|+|++|++++.+. +.||.++++|+++++.++..+|++|.+++++++++.+ +++...+|+||+|++|+
T Consensus 58 ~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~ 137 (539)
T PLN02590 58 LLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYY 137 (539)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEec
Confidence 46788999999999999988852 3699999999999999999999999999999999977 55666689999999999
Q ss_pred cCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-------CCeEECCChhHHHHHHHHHHHHh
Q psy12303 80 SCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-------GDSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-------~~~~~t~ggt~a~~~al~~~~~~ 152 (480)
+++.+++++++|++++.+|++.+.|..+|+.+++|+++.+|+++++|+|+ ..|+||+|||+||++||.+||++
T Consensus 138 ~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~ 217 (539)
T PLN02590 138 ASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDR 217 (539)
T ss_pred cCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 57999999999999999999997
Q ss_pred cCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEe
Q psy12303 153 MFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNC 230 (480)
Q Consensus 153 ~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~ 230 (480)
+.+. .|....| +.+||+|+.+|+|+.|++.++|++..+++.||+|. +++||+++|+++|++++++|..|++|++
T Consensus 218 ~~~~---~g~~~~~-~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~Vva 293 (539)
T PLN02590 218 ILKK---VGKTLLP-QLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICA 293 (539)
T ss_pred HHhh---hcccCCC-CEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5432 2333335 66999999999999999999999988899999984 6899999999999999999999999999
Q ss_pred ccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch
Q psy12303 231 TSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG 310 (480)
Q Consensus 231 ~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~ 310 (480)
+.|||.+|++|||++|+++|++||+|+|||||||++.++++.++. .+.|++.+||+++|+|||+++|++||++++|++.
T Consensus 294 TaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~-~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~ 372 (539)
T PLN02590 294 TVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK-FIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY 372 (539)
T ss_pred EeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHH-HhcCCccCCEEEECchhhcCcCcCEEEEEecCHH
Confidence 999999999999999999999999999999999999999999888 8999999999999999999999999999999998
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
.+...+...+.|+..........+++++|++++|||++++++|++|+.+|.+|+++++++..+++++|.+.|++ .++|+
T Consensus 373 ~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~-~~~fe 451 (539)
T PLN02590 373 SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ-DPSFE 451 (539)
T ss_pred HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Confidence 77777777888985533333345789999999999999999999999999999999999999999999999999 89999
Q ss_pred EecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHH
Q psy12303 391 LILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 391 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
++.+|.+++|||++.|..... ..++.++.++.+++.++|.++++++.+.+ ..++|+|++++.++++||+.++
T Consensus 452 l~~~~~l~iVcFr~~~~~~~~-------~~~~~ln~~l~~~l~~~G~~~vs~t~~~g-~~~lR~~i~n~~T~~~dv~~~~ 523 (539)
T PLN02590 452 VVTTRYFSLVCFRLAPVDGDE-------DQCNERNRELLAAVNSTGKIFISHTALSG-KFVLRFAVGAPLTEEKHVTEAW 523 (539)
T ss_pred EecCCceEEEEEEecCCCCCH-------HHHHHHHHHHHHHHHhCCCEEEEeeEECC-EEEEEEEecCCCCCHHHHHHHH
Confidence 999999999999998754210 12344568999999999999999999999 6899999999999999999999
Q ss_pred HHHHHhhcc
Q psy12303 471 TEMDRLGHD 479 (480)
Q Consensus 471 ~~l~~~~~~ 479 (480)
+.|.+.+.+
T Consensus 524 ~~i~~~a~~ 532 (539)
T PLN02590 524 QIIQKHASK 532 (539)
T ss_pred HHHHHHHHH
Confidence 999987654
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=5.4e-76 Score=587.62 Aligned_cols=461 Identities=24% Similarity=0.379 Sum_probs=412.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHh-hccCCccCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFT-TLKYQVRTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~-~~~~~~~~~~p~~~~~~~~ 81 (480)
+.++.++++++++++|++++.+ .||.+..+|+++++.++..+|++|.+++++++++.+ ++++..+++||+|++|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~--~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~ 91 (490)
T PLN02880 14 QLRECGHRMVDFIADYYKSIEN--FPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPS 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcccc--CCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccC
Confidence 4577899999999999999775 599999999999999999999999999999999976 5677778999999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-------CCeEECCChhHHHHHHHHHHHHhcC
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-------GDSILAPGGSISNLYAFLAARHKMF 154 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-------~~~~~t~ggt~a~~~al~~~~~~~~ 154 (480)
++.+++++++++.+.+|++...|+.+|+.+++|+++.+|+++++|+|+ +.|++|+|||+||++||.+||++.+
T Consensus 92 ~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~ 171 (490)
T PLN02880 92 NSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVL 171 (490)
T ss_pred CCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986 4699999999999999999999754
Q ss_pred chhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 155 PTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 155 ~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
+. .|....+ +.+|++|+.+|+|+.|++.++|++..+++.||+|+ +++||+++|+++|+++.++|..|++|++++
T Consensus 172 ~~---~g~~~~~-~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvata 247 (490)
T PLN02880 172 RK---VGKNALE-KLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATV 247 (490)
T ss_pred HH---hcccccC-CeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEec
Confidence 32 2322223 56899999999999999999999887899999985 679999999999999999999999999999
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhh
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLL 312 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~ 312 (480)
|||.+|.+||+++|+++|++||+|+|||||||++.+.++.++. .+.|++.+||+++|+|||+++|++||++++++...+
T Consensus 248 GTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~-~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l 326 (490)
T PLN02880 248 GTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH-YIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL 326 (490)
T ss_pred CCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH-HhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence 9999999999999999999999999999999999999988888 889999999999999999999999999999987766
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.......++|+..........+++.++++++|||++++++|++++.+|.+++++++++..++++++.+.|++ .++++++
T Consensus 327 ~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~-~~~~el~ 405 (490)
T PLN02880 327 IQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQ-DSRFEVV 405 (490)
T ss_pred HHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEe
Confidence 666667788886643333345778889999999999999999999999999999999999999999999999 8999999
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHH
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
.+|.++++||++.|.... ....+.++.++.++|.++|.++++.+.+.+ ..++|+|+.++.+|++||+.+++.
T Consensus 406 ~~~~~~iv~Fr~~~~~~~-------~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g-~~~lR~~~~n~~tt~~di~~~~~~ 477 (490)
T PLN02880 406 TPRIFSLVCFRLVPPKNN-------EDNGNKLNHDLLDAVNSSGKIFISHTVLSG-KYVLRFAVGAPLTEERHVTAAWKV 477 (490)
T ss_pred cCCceEEEEEEEeCCCCC-------hhhHHHHHHHHHHHHHhCCCEEEEEEEECC-EEEEEEEecCCCCCHHHHHHHHHH
Confidence 999999999999764321 112344567899999999999999999988 689999999999999999999999
Q ss_pred HHHhhcc
Q psy12303 473 MDRLGHD 479 (480)
Q Consensus 473 l~~~~~~ 479 (480)
|.+++++
T Consensus 478 i~~~~~~ 484 (490)
T PLN02880 478 LQDEASK 484 (490)
T ss_pred HHHHHHH
Confidence 9988764
No 3
>KOG0629|consensus
Probab=100.00 E-value=2.9e-77 Score=545.24 Aligned_cols=475 Identities=59% Similarity=1.074 Sum_probs=453.8
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCG 82 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~ 82 (480)
.++.++.++++.|.+|...-.++++.|..+..|.+|+..++.++|+.+++.++|+.+.++.+.+++.++||+|+|...++
T Consensus 32 ~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprffNQl~~g 111 (510)
T KOG0629|consen 32 VTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFFNQLSSG 111 (510)
T ss_pred hhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcchhhhccC
Confidence 35789999999999998777777889999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 83 LDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
.++.+..++++.+..|+|.++|+..|.+..+|.++...+.++.|++. .+++|++||+.||++++.+||.+.+|+.+..|
T Consensus 112 lD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~G 191 (510)
T KOG0629|consen 112 LDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKG 191 (510)
T ss_pred CCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhh
Confidence 99999999999999999999999999999999999999999999987 49999999999999999999999999999999
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
+...| +.++++|+.+|||+.+++.++|+|...++.|++++.|+|++++||++|.+++++|..|++|.+|+|||..|++|
T Consensus 192 m~~~p-~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD 270 (510)
T KOG0629|consen 192 MFALP-PLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD 270 (510)
T ss_pred hhcCC-cEEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC
Confidence 99989 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcc
Q psy12303 242 PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 242 ~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
||+.|+++|++|++|+|||||+||+.+.+..+++ ++.|++.+||+++++||++++|..||.+++|...++..+.+..+.
T Consensus 271 dL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~-kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~ 349 (510)
T KOG0629|consen 271 DLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH-KLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAI 349 (510)
T ss_pred cHHHHHHHHHhcCEEEEeecccccccccChhhHh-hccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchh
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVN 399 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~ 399 (480)
|+++++..|+..+|.|+..+||||+.+.+++|+.|++-|..|+++.++++.++|+||.+.|++ ..+++++.. |+..+
T Consensus 350 YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lre-r~~~~~l~~~~pe~~n 428 (510)
T KOG0629|consen 350 YLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRE-REGFEMLFELEPEHVN 428 (510)
T ss_pred hhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHh-cccceehhcCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999 788877653 88899
Q ss_pred EEEEeecCccCCCchh-hHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 400 VSFWYLPTRVRNMPHE-KRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~-~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+||+|+|+.+++...+ +...+|..+...+..+++++|..++++.+...+++++|+.+.++..+.+|+|.+++.|+++.+
T Consensus 429 v~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 429 VCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred EeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 9999999998887765 777888888899999999999999999888777889999988999999999999999999987
Q ss_pred cC
Q psy12303 479 DL 480 (480)
Q Consensus 479 ~l 480 (480)
+|
T Consensus 509 ~l 510 (510)
T KOG0629|consen 509 DL 510 (510)
T ss_pred CC
Confidence 65
No 4
>KOG0628|consensus
Probab=100.00 E-value=1e-73 Score=528.04 Aligned_cols=453 Identities=26% Similarity=0.384 Sum_probs=415.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCc-cCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQV-RTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~-~~~~p~~~~~~~~ 81 (480)
+-|+.+++|||+|+||++++++ +||+|.++|++++.++|.+.|++|++|++|++++++++.+++ +|+||+|++|+++
T Consensus 5 efR~~gk~mVD~IadY~e~ir~--r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa 82 (511)
T KOG0628|consen 5 EFREEGKEMVDYIADYLENIRK--RRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPA 82 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhhhc--cCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccC
Confidence 4688999999999999999996 499999999999999999999999999999999999776665 7999999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC---------CCeEECCChhHHHHHHHHHHHHh
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG---------GDSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~---------~~~~~t~ggt~a~~~al~~~~~~ 152 (480)
+.+++++++++++..++.-+++|.++|+.+++|..+.+|++++++.|. +.|++..++|++++.++.+||.+
T Consensus 83 ~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~ 162 (511)
T KOG0628|consen 83 GNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTE 162 (511)
T ss_pred ccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999863 67999999999999999999998
Q ss_pred cCchhHhcC----CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 153 MFPTYKEKG----LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 153 ~~~~~~~~g----~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
++...++.- ....-++.++|+|+++|.|++++|.+.|+ +++.+++|.++.|+.+.|+++|++++++|..|++|
T Consensus 163 ~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v 239 (511)
T KOG0628|consen 163 KIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFV 239 (511)
T ss_pred HHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEE
Confidence 765544331 01112267999999999999999999988 79999999999999999999999999999999999
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
++|.|||.+.++|+|++|..+|+++|+|||||+||+|.+..+++++. .+.|++.+||+.+++|||+.+...|+.+|+++
T Consensus 240 ~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~-l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd 318 (511)
T KOG0628|consen 240 CATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRY-LMRGIEYADSFNFNPHKWLLVNFDCSPLWVKD 318 (511)
T ss_pred EEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHH-HhhcchhhccccCChhheeEEeeeeecceeec
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 309 DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
+..+.......+-|+.+..... ..|+..|++++||||+++++|+.++.+|.+++++.++++.+|++.+.+.+.+ .+.
T Consensus 319 ~~~~~~~~~vdp~yL~h~~~~~--~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~-d~~ 395 (511)
T KOG0628|consen 319 GTKLSRAFNVDPLYLKHAYQGS--APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRA-DPR 395 (511)
T ss_pred CceeeeeeecChHhhcchhhcc--CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc-CCc
Confidence 9888777778888887754433 6889999999999999999999999999999999999999999999999999 899
Q ss_pred eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHH
Q psy12303 389 FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDF 468 (480)
Q Consensus 389 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~ 468 (480)
|+++.+...+.+|||..+. |++++++.++++.+|.+.+.+....| ..++|++++++.++++||++
T Consensus 396 FE~~~~~~lgLvcFRlk~~--------------N~~ne~Ll~~in~~g~i~l~~~~l~g-k~vlRf~V~s~~t~~~di~~ 460 (511)
T KOG0628|consen 396 FEIVNKRILGLVCFRLKGD--------------NEINEALLNRLNSSGRIHLVPASLHG-KFVLRFAVCSPLTNESDIDE 460 (511)
T ss_pred ceeecccccceeEEeecCC--------------cHHHHHHHHHHHhcCcEEEEEeeecc-eEEEEEEecCCCCcHHHHHH
Confidence 9999999999999986532 23357888999999999999988888 68999999999999999999
Q ss_pred HHHHHHHhhcc
Q psy12303 469 LLTEMDRLGHD 479 (480)
Q Consensus 469 ~~~~l~~~~~~ 479 (480)
.++.|.+.+.+
T Consensus 461 a~~~I~~~a~~ 471 (511)
T KOG0628|consen 461 AWKIIFEAADE 471 (511)
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 5
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=9.9e-66 Score=513.89 Aligned_cols=458 Identities=27% Similarity=0.411 Sum_probs=376.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHH-HhhccCCccCCCCCccccccCC
Q psy12303 4 TETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDC-FTTLKYQVRTGHPMFMNQLSCG 82 (480)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~-~~~~~~~~~~~~p~~~~~~~~~ 82 (480)
..++++++.+.+++|+.+-.....++++.+.+.. ....+|++|.+.+++++++ +.+++++++|+||+|++|++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~ 99 (522)
T TIGR03799 24 LGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDF----SSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSA 99 (522)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCchhhhhcc----cccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCC
Confidence 3455666666666666652221225555443332 2568999999999999986 5577899999999999999997
Q ss_pred -CChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC-------------CCCCeEECCChhHHHHHHHHH
Q psy12303 83 -LDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW-------------QGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 83 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~-------------~~~~~~~t~ggt~a~~~al~~ 148 (480)
+.....+++ +.+.+|+|...|+.+|+.+++|+++.+|++++++. +...|+||+|||+||++||++
T Consensus 100 ~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~ 178 (522)
T TIGR03799 100 LPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWV 178 (522)
T ss_pred CchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHH
Confidence 222233556 66789999999999999999999999999999952 125699999999999999999
Q ss_pred HHHhcCch------hHhcCCCc-----cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHH
Q psy12303 149 ARHKMFPT------YKEKGLSA-----IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLE 217 (480)
Q Consensus 149 ~~~~~~~~------~~~~g~~~-----~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~ 217 (480)
||+++++. .+..|+.. ...+.+|++|+.+|+|+.++++.+|++..+++.||+|++|+||+++|+++|++
T Consensus 179 AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~ 258 (522)
T TIGR03799 179 ARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAE 258 (522)
T ss_pred HHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHH
Confidence 99986532 22233321 01256899999999999999999999877899999999999999999999999
Q ss_pred HHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC
Q psy12303 218 RKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT 297 (480)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~ 297 (480)
+.++|.+|.+|+.++++|.+|.+||+++|+++|+++|+|+||||||+++.++++.+++ .+.+++++||+++|+|||+++
T Consensus 259 ~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~-~l~gle~aDSit~d~HK~l~~ 337 (522)
T TIGR03799 259 LAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRH-LLKGIERADSVTIDAHKQLYV 337 (522)
T ss_pred HHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHH-HhcCchhCCEEEEChhhcCCc
Confidence 8888888999999999999999999999999999999999999999999988888887 889999999999999999999
Q ss_pred cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy12303 298 LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEY 377 (480)
Q Consensus 298 p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~ 377 (480)
|++||++++|++..+.. ....++|+.... ..+++.+++++||++.++++|++++.+|.+|+++++++..+++++
T Consensus 338 P~g~G~llvr~~~~~~~-~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~ 411 (522)
T TIGR03799 338 PMGAGMVLFKDPALMSA-IEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKY 411 (522)
T ss_pred CcccEEEEEeCHHHHHH-hccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999866543 344567764321 235678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEecCCceeEEEEEeecCccCCC----ch---hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC----
Q psy12303 378 MVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNM----PH---EKRLNILGEITPILKGRMMQAGTMMVGYQPLN---- 446 (480)
Q Consensus 378 l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~----~~---~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---- 446 (480)
|.+.|++ .|+++++.+|..+++||++.|..+... +. ......++.++..+.+++.++|.++++.+...
T Consensus 412 l~~~L~~-~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~ 490 (522)
T TIGR03799 412 FADLIQQ-QPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQY 490 (522)
T ss_pred HHHHHhh-CCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeccccc
Confidence 9999999 899999999999999999988654321 00 12234467778999999999999999987654
Q ss_pred -Cc-ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 447 -DL-PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 447 -~~-~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+. ..++|++++|+.+|++||+.+++.=+
T Consensus 491 ~g~~~~~lR~~~~np~tt~~~i~~~l~~~~ 520 (522)
T TIGR03799 491 DHQPTVVFRVVLANPLTTHEILQDILDEQR 520 (522)
T ss_pred CCCCcEEEEEEecCCCCCHHHHHHHHHHhh
Confidence 21 36899999999999999999887643
No 6
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=6e-66 Score=499.16 Aligned_cols=364 Identities=38% Similarity=0.669 Sum_probs=323.8
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCc-cCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHH
Q psy12303 35 PAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQV-RTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILM 113 (480)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (480)
|+++++.++..+|++|.+.+++++++++.+.+.+ +|+||+|++++++++++++++++++.+.+|+|...|+.+|..+++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 6788888999999999999999999988765555 678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC-------CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 114 ETVVLEKMRQIIGWQ-------GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 114 e~~~~~~la~~~g~~-------~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
|.++.+|+++++|+| ...|++|+|||+||++|+.++|++..++.+..|... .++.+|++|+.+|+|+.|++.
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~-~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEE-IPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTH-CSSEEEEEETTS-THHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccc-ccccccccccccccHHHHhcc
Confidence 999999999999998 257999999999999999999999887777777531 126699999999999999999
Q ss_pred HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 187 VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
++|++ ++.||++++++||+++|+++|+++.++|..|.+|+++.|||.+|.+||+++|.++|+++++|+|||||||+.
T Consensus 160 ~lGlg---~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~ 236 (373)
T PF00282_consen 160 ILGLG---VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGS 236 (373)
T ss_dssp HTTSE---EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGG
T ss_pred eeeeE---EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccc
Confidence 99994 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
.+.++..+. ...+++.+||+++|+|||+++|++||++++|++..+.......+.|+.......+..++++++++++||+
T Consensus 237 ~~~~~~~~~-~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 237 ALLSPEYRH-LLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGGHCTTGG-GGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred ccccccccc-cccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 888998888 8999999999999999999999999999999998887777677899986555555667888999999999
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEe
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~ 404 (480)
++++++|++|+.+|.+|+++++++..+++++|.+.|++ .++++++.+|..++|||+|
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~-~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK-DPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEEESSTTSSSEEEEEE
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEcCCCceEEEEEe
Confidence 99999999999999999999999999999999999999 8999999999999999987
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=6.2e-59 Score=467.48 Aligned_cols=457 Identities=18% Similarity=0.241 Sum_probs=362.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhh-ccCCccCCCC-CccccccCC
Q psy12303 5 ETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTT-LKYQVRTGHP-MFMNQLSCG 82 (480)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~-~~~~~~~~~p-~~~~~~~~~ 82 (480)
++.+.++++.+++++++....++ +..+|.+++. ..+.+...+.+++++++.+. .+++++++|| +|++|++++
T Consensus 20 ~~~~~~~~~~~~~~r~~~~p~d~---~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~ 93 (608)
T TIGR03811 20 KDLLNKLVDEHLGWRQNYMPQDK---PVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGHMNSE 93 (608)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC---CCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEECcCC
Confidence 56777888888888877543332 3466776654 34555566799999999775 4677899999 999999999
Q ss_pred CChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhc-CchhHhc-
Q psy12303 83 LDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKM-FPTYKEK- 160 (480)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~-~~~~~~~- 160 (480)
+.+++++++++...+|+|...|+.+|+.+.+|+++.+|+++++|+++.+|+||+|||+||++||++||+.+ +|...+.
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 99999999999999999999999999999999999999999999988899999999999999999999964 2210000
Q ss_pred --------------------------------------CCC---ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEee
Q psy12303 161 --------------------------------------GLS---AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVP 199 (480)
Q Consensus 161 --------------------------------------g~~---~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~ 199 (480)
+.. ....-.++++|+..|+|+.|++.++|+|.++++.||
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 000 000012699999999999999999999988999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHH---HHcCc--EEEeeccccccc--cccc-
Q psy12303 200 SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADIC---QKYNM--WLHVDAAWGGGL--LLSK- 271 (480)
Q Consensus 200 ~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~---~~~~~--~l~vD~a~~~~~--~~~~- 271 (480)
+|++++||+++|+++|+++.++|.+|.+|+.+.|||.+|++|||++|+++| +++|+ |+||||||||+. ++.+
T Consensus 254 vD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~ 333 (608)
T TIGR03811 254 VDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDE 333 (608)
T ss_pred cCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccc
Confidence 999999999999999999999999999999999999999999999999999 67887 699999999975 2222
Q ss_pred -----------------------------cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 272 -----------------------------KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 272 -----------------------------~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
..+. .+.+++.+||+++|+|||++.|++||++++|++.. .......++|
T Consensus 334 ~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~-~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~-~~~~~~~a~Y 411 (608)
T TIGR03811 334 DDNFIPYDDLQEVHAEYGVFTEKKEYISREVYN-AYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRM-RDVISYFATY 411 (608)
T ss_pred cccccccchhhcccccccccccccccccHhHHH-HHhcCcCceEEEeCcccccccCCCeEEEEEeCHHH-HHHHhcCcch
Confidence 2233 67789999999999999999999999999999964 4455567889
Q ss_pred ccccccccCcccCCCCccccCCCC-CCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCC------CCeEE--
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMP------DKFYL-- 391 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~------~g~~~-- 391 (480)
+....... ....+.++++++|. ++++++|++++.+ |.+|+.++++++.++++++.+.|++ . +.+++
T Consensus 412 l~~~~~~~--p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~-~~~~~~~~~~el~~ 488 (608)
T TIGR03811 412 VFEKGADI--PALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN-LEFKVGDKEIEVHP 488 (608)
T ss_pred hccccccC--cccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-cccccCCCCeeEEe
Confidence 86532211 12456777888876 5799999999998 9999999999999999999999988 4 45666
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hccc-----EEEeeeeeC-------------------
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGT-----MMVGYQPLN------------------- 446 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~-----~~~~~~~~~------------------- 446 (480)
+.+|+++++||+|.|.... ..+.++.+++++++++- ..|. ++++.+.+.
T Consensus 489 ~~~pdlniV~Fr~~~~g~~------~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~ 562 (608)
T TIGR03811 489 LTKPDFNMVDYVFNEKGND------DLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSD 562 (608)
T ss_pred cCCCCcceEEEEEecCCCc------cHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCCh
Confidence 6789999999999876522 11235555677877775 2222 333332111
Q ss_pred ------CcccEEEEecccCCCCH-HHHHHHHHHHHHhhc
Q psy12303 447 ------DLPNFFRNIISSAAVTE-GDIDFLLTEMDRLGH 478 (480)
Q Consensus 447 ------~~~~~~R~~~~~~~~t~-~di~~~~~~l~~~~~ 478 (480)
+.-.++|.++++++.++ +.++.+++.|++.+.
T Consensus 563 ~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~ 601 (608)
T TIGR03811 563 EEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQ 601 (608)
T ss_pred hhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHH
Confidence 11357999988887665 778888888877654
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-52 Score=410.09 Aligned_cols=436 Identities=26% Similarity=0.341 Sum_probs=341.8
Q ss_pred HHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhh-ccCCcc-CCCCCccccccCCCChHHhHHH
Q psy12303 14 ILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTT-LKYQVR-TGHPMFMNQLSCGLDVVSMAGE 91 (480)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~-~~~~~~-~~~p~~~~~~~~~~~~~~~~~~ 91 (480)
.+.++....+. .+..+...|-.-.......+|+.+.+.+.++.++... +..... +.||+++.+..+...++.+..+
T Consensus 3 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~ 80 (460)
T COG0076 3 GLIDKDMLNSK--RYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAE 80 (460)
T ss_pred hHHHHHHhhcc--CCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHH
Confidence 34444444443 2444555555555556788999999999999998765 444443 4599999999999999999999
Q ss_pred HHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceE
Q psy12303 92 WLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLV 170 (480)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~ 170 (480)
.+...+++|...|..+|+++.+|+++..|+++++|.+ ...|+||+|||+||++|++++|++..+.....+... .+.++
T Consensus 81 ~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~-~~~P~ 159 (460)
T COG0076 81 LLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKP-GGKPN 159 (460)
T ss_pred HHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccccc-CCCCe
Confidence 9999999999999999999999999999999999994 577999999999999999999998754332211111 11338
Q ss_pred EEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH
Q psy12303 171 MFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI 249 (480)
Q Consensus 171 vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i 249 (480)
|++|..+|+|+.|++.++|++ ++.+|.++ +++||+++|+++|++++..| +|+.+.|||++|.+||+++|.+|
T Consensus 160 ii~s~~aH~s~~Kaa~~lG~~---~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~i 232 (460)
T COG0076 160 IVCSETAHFSFEKAARYLGLG---LRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADI 232 (460)
T ss_pred EEecCcchhHHHHHHHHhCCC---ceeEEeccCccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHH
Confidence 999999999999999999994 55666665 79999999999999995443 59999999999999999999999
Q ss_pred HHHcCcEEEeeccccccccccccccCcc-cCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPR-LTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
|+++++|+|||+|+|++.+++...+. . ..+++++||+++|+|||+++|++||++++|+++.+........+|+.+.
T Consensus 233 a~~~~i~lHVDAA~GG~~~pf~~~~~-~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~-- 309 (460)
T COG0076 233 AEEYGIWLHVDAAFGGFLLPFLEPDG-RWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG-- 309 (460)
T ss_pred HHHcCCcEEEEccccceeecccCccc-hhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC--
Confidence 99999999999999999998888777 5 7899999999999999999999999999999976666655556666442
Q ss_pred ccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC
Q psy12303 329 LYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~ 407 (480)
...+.++.++|.. .++++|+.++.+|.+||+++++++.++++++.+.|++ .+.++++.+|..+.+||++.+.
T Consensus 310 ------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~-~~~~e~~~~p~l~~V~fr~~~~ 382 (460)
T COG0076 310 ------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEK-LGDFELVNEPELPIVAFRLKDD 382 (460)
T ss_pred ------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHh-CCCcEeecCCccceEEEEcCCc
Confidence 2334455567766 8899999999999999999999999999999999999 7779999999999999998332
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
. . ...+....++..+..+..+...+|..++..+.... ..++++...+..++.++ +.+...+.
T Consensus 383 ~-~--~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 444 (460)
T COG0076 383 E-D--TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTG-RQGLKFIVANLLITDRE-ESLLALIE 444 (460)
T ss_pred c-c--chhchHHHHHhcCceeecccCCccceeeeeeEEee-eeeehhhcchhhhhhhh-HHHHHHhh
Confidence 1 1 01122222332334455555556655554444444 45667665666666666 55555544
No 9
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=8.5e-52 Score=405.91 Aligned_cols=401 Identities=16% Similarity=0.173 Sum_probs=321.8
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHH
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMR 122 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la 122 (480)
...+|++|.+.+++++.+...+- ..+..||+|+++.++++.+. +.+++...++.+...|..+|..+++|+++++|++
T Consensus 14 ~~~~p~~~~~~~~~~~~~~~~iy-ld~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 14 KYRMPEEEMPPDAAYQLIHDELS-LDGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred cccCCCCCCCHHHHHHHHHHHhh-hcCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 46899999999999999977553 24456899999999888776 4578888888887888888888899999999999
Q ss_pred HHhCCC-C-CC--eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEe
Q psy12303 123 QIIGWQ-G-GD--SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEV 198 (480)
Q Consensus 123 ~~~g~~-~-~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v 198 (480)
+++|++ + .+ +++|+||||||++|+.+++++.....++.|... . +.+|++|+.+|+|+.++++.+|+ +++.|
T Consensus 91 ~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~-~-~~~ii~s~~~H~sv~ka~~~lg~---~v~~i 165 (431)
T TIGR01788 91 DLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPT-D-KPNLVMGSNVQVCWEKFARYFDV---ELREV 165 (431)
T ss_pred HHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CcEEEEcCcchHHHHHHHHHcCc---eeEEE
Confidence 999997 3 23 445899999999999998864222112223211 1 34899999999999999999998 88999
Q ss_pred eCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc------CcEEEeeccccccccccc
Q psy12303 199 PSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY------NMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 199 ~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~------~~~l~vD~a~~~~~~~~~ 271 (480)
|++++ +.+|+++|+++|+++ |++|+++++||.+|++||+++|+++|+++ |+|+|||+||+++.+++.
T Consensus 166 ~~d~~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~ 239 (431)
T TIGR01788 166 PMDPGRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV 239 (431)
T ss_pred ecCCCceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHh
Confidence 99876 699999999999877 89999999999999999999999999999 999999999999886543
Q ss_pred cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-Cch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l 350 (480)
..+.+.....+++||+++|+|||+++|+|+|+++++++..+.......++|+... ..+.+++++|++ .++
T Consensus 240 ~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~---------~~~~t~~~sR~g~~al 310 (431)
T TIGR01788 240 YPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGD---------EPTFTLNFSRPANQVI 310 (431)
T ss_pred CCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCC---------CCCcceecCchHHHHH
Confidence 3222112236689999999999998999999999998755444334455676431 123567788886 788
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
+.|+.++.+|.+|+++++++..+++++|.+.|++ .++++++.+ |..+++||++.+..-.+ .+ +.++.
T Consensus 311 ~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~-~~~~el~~~~~~~~iV~Fr~~~~~~~~---------~~--~~~l~ 378 (431)
T TIGR01788 311 AQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK-LGPFEIISDGSGIPLVAFKLKDDADPG---------YT--LYDLS 378 (431)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEeeCCCCceEEEEEeCCCCCCC---------cC--HHHHH
Confidence 9999999999999999999999999999999999 899999987 78999999986532000 11 35678
Q ss_pred HHHHhcccEEE---eeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 430 GRMMQAGTMMV---GYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 430 ~~l~~~g~~~~---~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
++|.++|+.+. .++...+ ..++|++ +.+.++++.++.+++.|++++.+|
T Consensus 379 ~~L~~~G~~~~~~~~p~~~~~-~~~lR~~-~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 379 HRLRERGWIVPAYTLPKNAED-IVVMRIV-VREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHCCCcccCCCCCCccCC-eEEEEEE-ecCCCCHHHHHHHHHHHHHHHHhh
Confidence 88889997643 3333455 5789999 678889999999999999987654
No 10
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.2e-50 Score=393.51 Aligned_cols=356 Identities=20% Similarity=0.269 Sum_probs=293.8
Q ss_pred HHHHHHHHHhhccCCccCCCCCccccccCCCCh-HHhHHHHHHHHcCcCCcchhcCh---hhHHHHHHHHHHHHHHhCCC
Q psy12303 53 LQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDV-VSMAGEWLIATANTNMFTYEIAP---VFILMETVVLEKMRQIIGWQ 128 (480)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~---~~~~~e~~~~~~la~~~g~~ 128 (480)
++++++++.+.+.+.. ..|++| |...++ .+.+++++...+|.-+..|..+| ...++|+++.+|+++++|++
T Consensus 75 ~~~~l~~~~~~~~~~~----~~~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p 149 (470)
T PLN02263 75 MASVLARYRKTLVERT----KHHLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIE 149 (470)
T ss_pred HHHHHHHHHHHHHhcc----cceeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCC
Confidence 4778888877666443 238888 666666 68899999999988888888887 68999999999999999997
Q ss_pred C--CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCC
Q psy12303 129 G--GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRL 206 (480)
Q Consensus 129 ~--~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~ 206 (480)
+ .+|++|+|||+||++|+.++|+.. + +.++|+|+.+|+|+.|+++++|+ +++.||++++|+|
T Consensus 150 ~~~~~G~vtsGGTEaNL~Al~aARe~~------------~-~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~~g~m 213 (470)
T PLN02263 150 KNEYWGYITNCGTEGNLHGILVGREVF------------P-DGILYASRESHYSVFKAARMYRM---ECVKVDTLVSGEI 213 (470)
T ss_pred CCCCeEEEeCcHHHHHHHHHHHHHhhc------------C-CcEEEEcCCccHHHHHHHHhcCC---cceEeccCCCCcC
Confidence 5 469999999999999999999852 2 33899999999999999999999 7899999999999
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc-----EEEeeccccccccccccccCcccCCC
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM-----WLHVDAAWGGGLLLSKKYRHPRLTGI 281 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~~~ 281 (480)
|+++|+++|+++. .+|.+|+++.|||++|++|||++|.++|+++|+ |+|||||+||+.+++..... .+.+.
T Consensus 214 D~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~-~~df~ 289 (470)
T PLN02263 214 DCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP-KVTFK 289 (470)
T ss_pred cHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc-ccCCC
Confidence 9999999997753 358999999999999999999999999999997 99999999999885544332 45566
Q ss_pred CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhc
Q psy12303 282 ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKG 360 (480)
Q Consensus 282 ~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g 360 (480)
+.+||+++|+|||+++|++||++++|++. + ......+.|+... +.++.++|++ .++++|++|+.+|
T Consensus 290 ~~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~-----------d~ti~gSR~g~~al~lW~~L~~~G 356 (470)
T PLN02263 290 KPIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASR-----------DATIMGSRNGHAPIFLWYTLNRKG 356 (470)
T ss_pred cCccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCC-----------CCCcCCCCCcHHHHHHHHHHHHhC
Confidence 67999999999999999999999999653 2 3344567777543 2367789997 5899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEE
Q psy12303 361 DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMV 440 (480)
Q Consensus 361 ~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~ 440 (480)
.+|++++++++.++++++.+.|++ . |++++.+|...+++|+.. .. + ...+|..+.
T Consensus 357 ~~G~~~~i~~~~~~A~~l~~~l~~-~-g~~~~~~p~s~~V~f~~p-~~------------------~----~~~~gW~L~ 411 (470)
T PLN02263 357 YRGFQKEVQKCLRNAHYLKDRLRE-A-GISAMLNELSSTVVFERP-KD------------------E----EFVRRWQLA 411 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEEeCCCceEEEEecC-ch------------------H----HhhcceEEc
Confidence 999999999999999999999999 4 888878899999999521 10 0 113443222
Q ss_pred eeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 441 GYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 441 ~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.. ++.++++ +.+..+++.||.+++.|++..+
T Consensus 412 ~~------~~~~Hiv-vmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 412 CQ------GNIAHVV-VMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cC------CCcEEEE-EcCCCCHHHHHHHHHHHHHHHh
Confidence 11 4579999 6676789999999999987654
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=3.1e-45 Score=352.00 Aligned_cols=353 Identities=19% Similarity=0.232 Sum_probs=269.7
Q ss_pred HHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchh---cChhhHHHHHHHHHHHHHHhCCCCC-
Q psy12303 55 KLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYE---IAPVFILMETVVLEKMRQIIGWQGG- 130 (480)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~e~~~~~~la~~~g~~~~- 130 (480)
++++.+.+.+. ..+..|++|...-..-.+.+..++....+.-+..+. .+....++|+++++|+++++|+++.
T Consensus 10 ~~~~~~~~~~~----~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~ 85 (374)
T PLN03032 10 DILASYDKLLA----EKSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDE 85 (374)
T ss_pred HHHHHHHHHHH----HhhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCcc
Confidence 34444444443 334566666544422224455555544332222222 2335789999999999999999764
Q ss_pred -CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHH
Q psy12303 131 -DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPS 209 (480)
Q Consensus 131 -~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~ 209 (480)
+|+||+|||+||++++.++|+.. + +.+|++|..+|+|+.++++.+|+ .++.||++++|+||++
T Consensus 86 ~~G~fTsGGTEaNl~al~~ar~~~------------~-~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~g~id~~ 149 (374)
T PLN03032 86 YWGYITTCGTEGNLHGILVGREVF------------P-DGILYASRESHYSVFKAARMYRM---EAVKVPTLPSGEIDYD 149 (374)
T ss_pred CCEEEeCchHHHHHHHHHHHHHhC------------C-CcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCCCcCcHH
Confidence 47999999999999999998742 2 23899999999999999999998 5788999999999999
Q ss_pred HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC-----cEEEeeccccccccccccccCcccCCCCCC
Q psy12303 210 ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN-----MWLHVDAAWGGGLLLSKKYRHPRLTGIERA 284 (480)
Q Consensus 210 ~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~-----~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~ 284 (480)
+|+++|+++. ..|.+|+++++||++|++||+++|+++|+++| +|+|||+|++++.+++..... .+....++
T Consensus 150 ~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~-~~~~~~~v 225 (374)
T PLN03032 150 DLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAP-EVTFRKPI 225 (374)
T ss_pred HHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCc-ccCCCcCC
Confidence 9999998742 24899999999999999999999999999996 599999999999876543222 33333479
Q ss_pred ccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHH
Q psy12303 285 DSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEG 363 (480)
Q Consensus 285 D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~ 363 (480)
||+++|+||++++|.|+|++++++.. +.. ....++|+... +++++++|+ +.++++|++|+.+|.+|
T Consensus 226 DSis~s~HK~~g~P~g~G~ll~r~~~-~~~-~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~~G~~g 292 (374)
T PLN03032 226 GSVSVSGHKFLGCPMPCGVALTRKKH-VKA-LSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRRKGYRG 292 (374)
T ss_pred cEEEECcccccCCCcCeEEEEEEchh-hHh-hccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHHhCHHH
Confidence 99999999999999999999999753 332 33456776432 357889997 57999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeee
Q psy12303 364 FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQ 443 (480)
Q Consensus 364 ~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~ 443 (480)
+.++++++.++++++.+.|++ .+++++.+|...+++|+.... ..+ .+|..+...
T Consensus 293 ~~~~~~~~~~~a~~l~~~l~~--~~~~~~~~p~~~~V~f~~~~~----------------------~~~-~~~w~l~~~- 346 (374)
T PLN03032 293 IKRDVQHCMRNAHYLKDRLTE--AGLTCRLNELSSTVVFERPMD----------------------EAF-IKKWQLACE- 346 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--CCCcEEECCCceEEEEcCCCc----------------------HhH-hheeeeccc-
Confidence 999999999999999999999 588888899999999853210 011 133222211
Q ss_pred eeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 444 PLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 444 ~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
++.+|++ +.+.+|++.||++++.|++.
T Consensus 347 -----~~~~hi~-vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 347 -----GDIAHVV-VMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred -----CCEEEEE-ECCCCCHHHHHHHHHHHhcc
Confidence 3589999 66778899999999998764
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.9e-44 Score=349.72 Aligned_cols=353 Identities=21% Similarity=0.274 Sum_probs=276.4
Q ss_pred HHHHHHHHhhccCCccCCCCCccccccCCCCh-HHhHHHHHHHHcCcCCcchhcCh----hhHHHHHHHHHHHHHHhCCC
Q psy12303 54 QKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDV-VSMAGEWLIATANTNMFTYEIAP----VFILMETVVLEKMRQIIGWQ 128 (480)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~----~~~~~e~~~~~~la~~~g~~ 128 (480)
.+.++.+...+. +||+++..++..... .+.+++++....+. ...+...+ ...++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~-----~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n-~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~ 81 (380)
T PRK02769 8 QKEIEDFWLYLR-----HNQYFNVGYPEAADFDYSALKRFFSFSINN-CGDPYSKSNYPLNSFDFERDVMNFFAELFKIP 81 (380)
T ss_pred HHHHHHHHHHHH-----HhhhcccCCCchhhcCHHHHHHHHHhhhcc-CCCccccCCCCCChHHHHHHHHHHHHHHhCCC
Confidence 344455544443 456666665555554 56777877776654 33444444 36889999999999999997
Q ss_pred CC--CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCC
Q psy12303 129 GG--DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRL 206 (480)
Q Consensus 129 ~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~ 206 (480)
+. .|+||+|||+||+.++.++|+.. |++ +|++|+.+|+|+.++++.+|+ +.+.||++++|++
T Consensus 82 ~~~~~G~~TsGgTean~~a~~~ar~~~------------~~~-~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~g~i 145 (380)
T PRK02769 82 FNESWGYITNGGTEGNLYGCYLARELF------------PDG-TLYYSKDTHYSVSKIARLLRI---KSRVITSLPNGEI 145 (380)
T ss_pred CCCCCEEEecChHHHHHHHHHHHHHhC------------CCc-EEEeCCCceehHHHHHHHcCC---CCceeccCCCCcC
Confidence 53 47999999999999999998742 323 899999999999999999998 5567888889999
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC---cEEEeeccccccccccccccCcccCCCCC
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN---MWLHVDAAWGGGLLLSKKYRHPRLTGIER 283 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~---~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 283 (480)
|+++|+++|+++ +.+|++|+++++||.+|.+||+++|+++|+++| +|+||||||+++.+++..... .+...++
T Consensus 146 d~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~-~~d~~~~ 221 (380)
T PRK02769 146 DYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP-PFSFADG 221 (380)
T ss_pred cHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccc-cCCccCC
Confidence 999999999875 566999999999999999999999999999998 699999999999887654333 3443348
Q ss_pred CccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH
Q psy12303 284 ADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE 362 (480)
Q Consensus 284 ~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~ 362 (480)
+||+++|+|||+++|.|+|+++++++. +.... ....|+.. .+.++.++|+ +.++++|++|+.+|.+
T Consensus 222 vDsis~s~HK~~~~P~g~G~l~~r~~~-~~~~~-~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~lg~~ 288 (380)
T PRK02769 222 IDSIAISGHKFIGSPMPCGIVLAKKKY-VERIS-VDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSLGSK 288 (380)
T ss_pred CCEEEECCcccCCCCCCcEEEEEehhh-hhhcc-cCccccCC-----------CCCCccCCCCcHHHHHHHHHHHHHCHH
Confidence 999999999999999999999999753 33322 23455432 2346678886 4789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEee
Q psy12303 363 GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGY 442 (480)
Q Consensus 363 ~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~ 442 (480)
|++++++++.++++++.+.|++ .|++++.+|..++|+|.... ..+. +|.. ++.
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~--~g~~~~~~p~~~~v~f~~~~-------------------~~~~-----~~w~-l~~ 341 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQA--NGIPAWRNPNSITVVFPCPS-------------------ERIW-----KKWH-LAT 341 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCCceEEEEcCCC-------------------HHHH-----hCee-Ecc
Confidence 9999999999999999999998 69999999999999995321 1111 3322 221
Q ss_pred eeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 443 QPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 443 ~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. +..+|++ +.+.+|++.||.+++.|.+...
T Consensus 342 ~-----~~~~hi~-~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 342 S-----GNQAHII-TMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred c-----CCEEEEE-ECCCCCHHHHHHHHHHHHHHHh
Confidence 1 3589999 7788899999999999987654
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=7.9e-43 Score=340.49 Aligned_cols=343 Identities=36% Similarity=0.551 Sum_probs=283.9
Q ss_pred ccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHh
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~ 152 (480)
|++++.+++.+++.+++.+...+|++...|..++...++|+++++|+++++|++ +.+++||+|||+||..++.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~ 80 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDR 80 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHH
Confidence 677888889999999999999999999889999999999999999999999996 457999999999999999999875
Q ss_pred cCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 153 MFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 153 ~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
..+..+..+... .++.+|+++..+|+++.+++..+|. +++.+|+++++.+|+++|++++++...++.++++|++++
T Consensus 81 ~~~~~~~~~~~~-~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 156 (345)
T cd06450 81 ARKRLKAGGGRG-IDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATA 156 (345)
T ss_pred hhhhhhcccccc-cCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEec
Confidence 433222111111 1144899999999999999999887 889999988889999999999998766777799999999
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhh
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLL 312 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~ 312 (480)
++|++|.++|+++|.++|+++|+|+|+|+||+.+..+.+.... ...+.+++|++++++|||+++|.++|+++++
T Consensus 157 ~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----- 230 (345)
T cd06450 157 GTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRH-LDFGIERVDSISVDPHKYGLVPLGCSAVLVR----- 230 (345)
T ss_pred ccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHH-HhcCccccCEEEEchhHhhCCCcchHHHHHH-----
Confidence 9999999999999999999999999999999998876554333 3344557999999999999999999988765
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
++++|++++.++.+++++++++..++++++.+.|++ +++++++
T Consensus 231 ------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 273 (345)
T cd06450 231 ------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRA-DPGFELL 273 (345)
T ss_pred ------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEe
Confidence 347888899899999999999999999999999999 8999988
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHH
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
.++..++++|++.+..-.+ . .+.++.++|.++|.+++......+ ..++|+++.++.+|++||+++++.
T Consensus 274 ~~~~~~iv~f~~~~~~~~~---------~--~~~~i~~~L~~~g~~~~~~~~~~~-~~~lRis~~~~~~t~~di~~l~~~ 341 (345)
T cd06450 274 GEPNLSLVCFRLKPSVKLD---------E--LNYDLSDRLNERGGWHVPATTLGG-PNVLRFVVTNPLTTRDDADALLED 341 (345)
T ss_pred cCCceeEEEEEECCcchhh---------H--HHHHHHHHHHhcCCEEEEeeEECC-eEEEEEEecCCCCCHHHHHHHHHH
Confidence 7788889998764321000 1 134677888888777666544444 579999955556799999999999
Q ss_pred HHHh
Q psy12303 473 MDRL 476 (480)
Q Consensus 473 l~~~ 476 (480)
|+++
T Consensus 342 l~~~ 345 (345)
T cd06450 342 IERA 345 (345)
T ss_pred HHhC
Confidence 9763
No 14
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-38 Score=307.06 Aligned_cols=357 Identities=16% Similarity=0.105 Sum_probs=273.2
Q ss_pred CCccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFL 147 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~ 147 (480)
..|+++..++..|..++......+ .|.+...+..+...++..+++++.+++++|+++ ++++||+|+|+|+.....
T Consensus 23 ~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~ 102 (405)
T COG0520 23 LVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVAR 102 (405)
T ss_pred eEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHH
Confidence 369998888887777774333322 333434555666678888899999999999985 899999999999998887
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC-CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG-TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~-~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.... ..+|+ +|+++..+|+|....+..+... +.+++.+|.+++|.++.+++++.+++. |+
T Consensus 103 ~l~~~-----------~~~gd-eIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~------Tk 164 (405)
T COG0520 103 GLGRS-----------LKPGD-EIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPK------TK 164 (405)
T ss_pred Hhhhh-----------hcCCC-EEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCC------ce
Confidence 76421 01555 8999999999977766665321 228999999999999999999988776 99
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|.+++.+|.+|.+.|+++|+++||++|+|++||++|+.+.++.+.... ++|++.+|+|||+++|.|+|++++
T Consensus 165 lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l-------~~Df~afsgHKwl~gP~GiGvLy~ 237 (405)
T COG0520 165 LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL-------GCDFLAFSGHKWLLGPTGIGVLYV 237 (405)
T ss_pred EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc-------CCCEEEEcccccccCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999998777 999999999999999999999999
Q ss_pred eCchhhHhhhcCCcccccccccc------cCcccCCCCccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy12303 307 KQDGLLISCNQMSAEYLFMQDKL------YDVRYDTGDKVIQCGRHN--DIFKLWLQWRAKGDEGFEKQIDRLMELAEYM 378 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~r~~--~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l 378 (480)
++.. +... .++..+.... ....+....+.++.|... .++.+-++++.+...|++++.++.+++++++
T Consensus 238 r~~~-l~~l----~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~ 312 (405)
T COG0520 238 RKEL-LEEL----EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL 312 (405)
T ss_pred chHH-Hhhc----CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8653 3332 2332222111 011122222333334332 5566677788777888999999999999999
Q ss_pred HHHHhcCCCCeEEecCC---ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC--------C
Q psy12303 379 VKKIKSMPDKFYLILEP---EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN--------D 447 (480)
Q Consensus 379 ~~~l~~~~~g~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~--------~ 447 (480)
.+.|++ +|++++++++ ..++++|...... ..++...|.++| +++..+... +
T Consensus 313 ~~~L~~-~~~v~i~g~~~~~r~~~vsF~v~~~~----------------~~dv~~~L~~~g-I~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 313 LEGLSE-LPGVEIYGPPDADRGGIVSFNVKGIH----------------PHDVATLLDEKG-IAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHhc-CCCeEEecCCcccCceEEEEEeCCCC----------------HHHHHHHHHhCC-eEEEeccccccHHHHhcC
Confidence 999999 9999999876 5778888653221 357888899999 444432211 1
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
....+|+| +++++|++|||+++++|+++.+
T Consensus 375 ~~~~iR~S-~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 375 VDATIRAS-LHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCCceEEE-EeecCCHHHHHHHHHHHHHHhh
Confidence 12349999 9999999999999999998753
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-37 Score=286.06 Aligned_cols=351 Identities=17% Similarity=0.158 Sum_probs=250.6
Q ss_pred CCccccccCCCChHHhHHHHHH---H-HcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLI---A-TANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~ 148 (480)
+.|++|..+.+..+.++..++. . +.|++. .+..+..+..+-++.++.+++++|+++.+++||+||||+|..+|+.
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHh
Confidence 4688886666555556554333 2 345544 3444555667777889999999999989999999999999999997
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
+.... .... .|+ .|+++..+|+++...++.+...+.+|.++|++.+|.+|+++|+++|+++ |.+|
T Consensus 81 ~~~a~----~~~~----~~~-HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~------T~LV 145 (386)
T COG1104 81 AALAY----RNAQ----KGK-HIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPD------TILV 145 (386)
T ss_pred hHHhh----hccc----CCC-eEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCC------ceEE
Confidence 54321 0000 123 8999999999999999999222229999999999999999999999988 9999
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
.+.+.+|.+|++.|+++|.++||+++++||+|++++.|.++.+.... ++|++++|.||+.+ |.|+|++|+++
T Consensus 146 Sim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~-------~vD~ls~SaHK~~G-pkGiGaLyv~~ 217 (386)
T COG1104 146 SIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL-------GVDLLSFSAHKFGG-PKGIGALYVRP 217 (386)
T ss_pred EEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc-------CcceEEeehhhccC-CCceEEEEECC
Confidence 99999999999999999999999999999999999999999888776 79999999999977 89999999965
Q ss_pred chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 309 DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
...+ .+.+.+..++.+.+ .|+-++ ..+.++..+++ +..+.++....+...++++|.+.|.+..|+
T Consensus 218 ~~~~-------~p~i~GGgQE~g~R--sGTenv-----~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~ 282 (386)
T COG1104 218 GVRL-------EPLIHGGGQERGLR--SGTENV-----PGIVGFGKAAE-IAVEELEEENARLRKLRDRLEDGLLEIIPD 282 (386)
T ss_pred CCcc-------CceeccCcCCCCCC--CCCccH-----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4322 23343433331111 111110 12233333333 246777888899999999999999973488
Q ss_pred eEEecCC--ce-eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhccc------EEEeeeeeC-------C-----
Q psy12303 389 FYLILEP--EM-VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGT------MMVGYQPLN-------D----- 447 (480)
Q Consensus 389 ~~~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~------~~~~~~~~~-------~----- 447 (480)
+.+.+.+ .. ++++|.+. .+.+ +.+.-.|...|+ .+.+..... |
T Consensus 283 ~~~~g~~~~rlP~~~~~~f~--gv~g--------------E~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~ 346 (386)
T COG1104 283 VYLNGDDEPRLPNILNFSFP--GVEG--------------ESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEEL 346 (386)
T ss_pred EEEcCCcccCCCCeEEEEeC--CCcH--------------HHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHH
Confidence 8886643 22 33334332 1111 223333334442 222110000 1
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....+||| .+..+|++||+++++.++++++.
T Consensus 347 a~~siR~S-~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 347 AHGSIRFS-LGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred hCccEEEE-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 15789999 88999999999999999988764
No 16
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=4.2e-36 Score=296.09 Aligned_cols=368 Identities=20% Similarity=0.287 Sum_probs=272.9
Q ss_pred CCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC
Q psy12303 51 LPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG 130 (480)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~ 130 (480)
.++.++++.+++....+.... +|++.+.+++.+. +. +.+..++..+.......+....+++++++++++++|+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE--RILSSMCTEPHPI-AR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDA 77 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH--HeeeeeecCchHH-HH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 457889999998888777666 4787776665554 22 3343433333222222355677888999999999999877
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHH
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSE 210 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~ 210 (480)
.+++++|||+||..++.++++... .+++ +|+++..+|+++.++++..|+ +++.+|.++++.+|+++
T Consensus 78 ~~~~~~ggt~a~~~a~~~~~~~~~----------~~~~-~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~~~~d~~~ 143 (371)
T PRK13520 78 YGYITSGGTEANIQAVRAARNLAK----------AEKP-NIVVPESAHFSFDKAADMLGV---ELRRAPLDDDYRVDVKA 143 (371)
T ss_pred CeEEecCcHHHHHHHHHHHHhhcc----------CCCc-eEEecCcchHHHHHHHHHcCc---eEEEecCCCCCcCCHHH
Confidence 889999999999999988875310 0223 799999999999999999887 78899998889999999
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeC
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWN 290 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s 290 (480)
|+++++++ +++|++++++|++|.+.|+++|.++|+++|+++|||++|+++..+......+......++|+++++
T Consensus 144 l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s 217 (371)
T PRK13520 144 VEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITID 217 (371)
T ss_pred HHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEEC
Confidence 99999875 778888889999999999999999999999999999999987653222111001112378999999
Q ss_pred ccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHH
Q psy12303 291 PHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQID 369 (480)
Q Consensus 291 ~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~ 369 (480)
+|||+++|.++|+++++++..+.... ...+|+.... .....+++. ..+.+++.+++.++.++++++.+
T Consensus 218 ~~K~~~a~~~~G~~~~~~~~~~~~l~-~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 218 PHKMGLAPIPAGGILFRDESYLDALA-VDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred CccccCccCCceEEEEcCHHHHHhhc-ccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhHHHHHHH
Confidence 99999988999999988776554432 2233432211 111123333 24677888898888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcc
Q psy12303 370 RLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLP 449 (480)
Q Consensus 370 ~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~ 449 (480)
+..++++++.+.|++ . |++++.++..+++++.+. . ..++.+.|.++|+. +... .. .
T Consensus 287 ~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~v~~~~~--~----------------~~~v~~~L~~~gi~-v~~~--~~-~ 342 (371)
T PRK13520 287 RCMENTRWLAEELKE-R-GFEPVIEPVLNIVAFDDP--N----------------PDEVREKLRERGWR-VSVT--RC-P 342 (371)
T ss_pred HHHHHHHHHHHHHHh-C-CCEEecCCCceEEEEecC--C----------------HHHHHHHHHHCCce-eccC--CC-C
Confidence 999999999999999 5 888545666666666432 1 23567778788744 3321 12 4
Q ss_pred cEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 450 NFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 450 ~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++|++ +++.+|++||+++++.|+++++
T Consensus 343 ~~iRis-~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 343 EALRIV-CMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CEEEEE-EECCCCHHHHHHHHHHHHHHhh
Confidence 689999 7778999999999999998765
No 17
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=6.1e-35 Score=287.93 Aligned_cols=369 Identities=20% Similarity=0.286 Sum_probs=268.4
Q ss_pred CHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCC
Q psy12303 52 PLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGD 131 (480)
Q Consensus 52 ~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~ 131 (480)
+.+++++.+.+.+..+++.++++++..+...+.+... +....+...+.......+....+++++++++++++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~ 78 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAV--KAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAY 78 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHH--HHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCC
Confidence 3578899999998999999999988887776665532 22333322222111223556788899999999999998878
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHH
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSEL 211 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L 211 (480)
+++++|+|+++..++.+++.... .+ .+|+ .|+++..+|+++.++++..|+ +++.+|+++++.+|+++|
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~-----~~---~~g~-~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~~~~~d~~~l 146 (373)
T TIGR03812 79 GYIVSGGTEANIQAVRAAKNLAR-----EE---KRTP-NIIVPESAHFSFEKAAEMLGL---ELRYAPLDEDYTVDVKDV 146 (373)
T ss_pred eEEeccHHHHHHHHHHHHHHHHh-----cc---CCCc-EEEECCcchHHHHHHHHHcCC---eEEEEeeCCCCCcCHHHH
Confidence 89999999999999887764210 01 1334 788999999999999999988 889999988899999999
Q ss_pred HHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc---cCcccCCCCCCccce
Q psy12303 212 ERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY---RHPRLTGIERADSVT 288 (480)
Q Consensus 212 ~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~---~~~~~~~~~~~D~~~ 288 (480)
+++++++ +..+++..++|++|.++|+++|.++|+++|+|+|+|+||+++....... ..+......++|+++
T Consensus 147 ~~~l~~~------~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~ 220 (373)
T TIGR03812 147 EDLIDDN------TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSIT 220 (373)
T ss_pred HHHHhhC------cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEE
Confidence 9999765 5455555588999999999999999999999999999999776432210 000111123789999
Q ss_pred eCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHH
Q psy12303 289 WNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQ 367 (480)
Q Consensus 289 ~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~ 367 (480)
+++|||+.+|.++|++++++++.+.... ...+|+.... .....+++. ....+++.+++.++.+++++.
T Consensus 221 ~s~~K~~~~~~~~G~~~~~~~~~~~~l~-~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~ 289 (373)
T TIGR03812 221 IDPHKMGLSPIPAGGILFRSKSYLKYLS-VDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGREGYRKI 289 (373)
T ss_pred ECccccCCCcCCceEEEEeCHHHHhhhc-ccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCHHHHHHH
Confidence 9999998888889888877776654432 2233432211 111223443 356778888888899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC
Q psy12303 368 IDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND 447 (480)
Q Consensus 368 ~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~ 447 (480)
.++..+++++|++.|++ + +++.+.+|..+.++|... . ..++.++|.++|++ +... .+
T Consensus 290 ~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~v~~~~~--~----------------~~~v~~~L~~~gi~-v~~~--~~ 346 (373)
T TIGR03812 290 VAECMENTRYLVEELKK-I-GFEPVIEPVLNIVAFEVD--D----------------PEEVRKKLRDRGWY-VSVT--RC 346 (373)
T ss_pred HHHHHHHHHHHHHHHHh-C-CCeEEcCCCceEEEEEeC--C----------------HHHHHHHHHHCCce-eccC--CC
Confidence 99999999999999999 5 565444566677766432 1 12566778788744 3332 12
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++|++ ++..+|++|++++++.|+++
T Consensus 347 -~~~iRis-~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 347 -PKALRIV-VMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred -CCEEEEE-EECCCCHHHHHHHHHHHhhC
Confidence 4689999 77789999999999999863
No 18
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=9.2e-33 Score=274.61 Aligned_cols=355 Identities=14% Similarity=0.086 Sum_probs=251.1
Q ss_pred CCccccccCCCChHHhHHHHHHHHcC-----cCCcchhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATAN-----TNMFTYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAF 146 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al 146 (480)
..|+++...++.+..++..+ ..++. .....+..+....+...++++.+++++|+ +++++++|+|+|+++..++
T Consensus 20 ~~yld~a~~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEAT-QQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVA 98 (401)
T ss_pred eEEEeCCcccCCCHHHHHHH-HHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHH
Confidence 46999998888888777433 33322 11122223344566677889999999999 6788999999999999888
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhH----HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV----RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~----~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
.+..... . .||+ .|++++.+|++. ...++..|+ +++.+|.+.++.+|+++++++++++
T Consensus 99 ~~~~~~~--------~--~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~~~---- 160 (401)
T PRK10874 99 QSYARPR--------L--QPGD-EIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGADRLPDVDLLPELITPR---- 160 (401)
T ss_pred HHhhhcc--------C--CCcC-EEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCCCcCCHHHHHHhcCcC----
Confidence 7763210 0 1445 889999999874 445566676 8899999888899999999999765
Q ss_pred CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 223 DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
|++|++++++|+||.+.|+++|.++|+++|+++++|++|+.+..+.+.... ++|++++|+||++ +|.|+|
T Consensus 161 --t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~-------~~d~~~~s~~K~~-gp~G~G 230 (401)
T PRK10874 161 --TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL-------DIDFYAFSGHKLY-GPTGIG 230 (401)
T ss_pred --cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc-------CCCEEEEeccccc-CCCccE
Confidence 899999999999999999999999999999999999999877665544333 6899999999965 588999
Q ss_pred EEEEeCchhhHhhhcCCcccccccccccC---cccCC--CCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKLYD---VRYDT--GDKVIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~--~~~~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
++++++ +.+... .++..+...... ..+.. ..+.++.|.. ...+++..++..+...++.+..++..+++
T Consensus 231 ~l~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 231 VLYGKS-ELLEAM----SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLA 305 (401)
T ss_pred EEEEch-HHHhcC----CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 999764 343332 122211100000 00000 1111222222 14556666777666667777888889999
Q ss_pred HHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-------CCc
Q psy12303 376 EYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-------NDL 448 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-------~~~ 448 (480)
+++.+.|++ +||++++.++..++++|.+. ... ..++.+.|.++|+++...... .+.
T Consensus 306 ~~l~~~l~~-~~g~~~~~~~~~~i~~~~~~--~~~--------------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~ 368 (401)
T PRK10874 306 TLAEDALAK-LPGFRSFRCQDSSLLAFDFA--GVH--------------HSDLVTLLAEYGIALRAGQHCAQPLLAALGV 368 (401)
T ss_pred HHHHHHHhc-CCCEEEeCCCCCcEEEEEEC--CcC--------------HHHHHHHHHHCCcEEeccccchHHHHHHhCC
Confidence 999999999 89999887777777777542 111 235667777777544332211 122
Q ss_pred ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 449 PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 449 ~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+++|+| +++++|++||+++++.|+++++.
T Consensus 369 ~~~iRiS-~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 369 TGTLRAS-FAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CCEEEEE-ecccCCHHHHHHHHHHHHHHHHH
Confidence 4699999 88899999999999999988764
No 19
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.1e-32 Score=273.86 Aligned_cols=354 Identities=13% Similarity=0.056 Sum_probs=249.4
Q ss_pred CCccccccCCCChHHhHHHHHHHHcC---cCC--cchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATAN---TNM--FTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAF 146 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~---~~~--~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al 146 (480)
..|+++..+++.+..++. .+..++. .+. ..+..++...+...++++.+++++|.+ ++++++|+|+|+++..++
T Consensus 17 ~iyld~a~~~~~p~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 17 TVYLDSAATALKPQAVID-ATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVA 95 (398)
T ss_pred eEEeeCccccCCCHHHHH-HHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHH
Confidence 369999988888877764 3333322 121 222233444566678899999999994 678999999999999888
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhH----HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV----RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~----~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
.+..... ..||+ .|+++..+|++. ...++..|+ +++.+|++.++.+|+++|+++++++
T Consensus 96 ~~~~~~~----------~~~gd-~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~l~~~i~~~---- 157 (398)
T TIGR03392 96 QSYARPR----------LQPGD-EIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGADLLPDIRQLPELLTPR---- 157 (398)
T ss_pred HHhhhcc----------CCCCC-EEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCCCCCcCHHHHHHHhccC----
Confidence 7763210 01445 889999999874 345566677 8899999888889999999999765
Q ss_pred CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 223 DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
|++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+.... ++|++++|+||++ +|.|+|
T Consensus 158 --t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~-------~~d~~~~s~~K~~-gp~G~G 227 (398)
T TIGR03392 158 --TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL-------DIDFYAFSGHKLY-GPTGIG 227 (398)
T ss_pred --ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc-------CCCEEEEeccccc-CCCceE
Confidence 899999999999999999999999999999999999999877665544333 6899999999965 578999
Q ss_pred EEEEeCchhhHhhhcCCcccccccccc-cC--cccCC--CCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKL-YD--VRYDT--GDKVIQCGRH-N-DIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~--~~~~~--~~~~~~~~r~-~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
++++++ +.+... .++..+.... .. ..+.+ ....++.|.. . ..+++..+++.+...+++++.++..+++
T Consensus 228 ~l~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 228 VLYGKT-ELLEAM----PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred EEEEcH-HHHhhC----CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 998764 343332 1222111000 00 00000 0011222222 1 4556677777666667778889999999
Q ss_pred HHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------CC
Q psy12303 376 EYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------ND 447 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------~~ 447 (480)
+++.+.|.+ +++++++..+...+++|... ... ..++.+.|.+.|+. +..+.. .+
T Consensus 303 ~~l~~~l~~-l~g~~~~~~~~~~i~~~~~~--~~~--------------~~~l~~~L~~~gI~-v~~g~~~~~~~~~~~g 364 (398)
T TIGR03392 303 DLAEERLAQ-LPGFRSFRCPGSSLLAFDFA--GVH--------------HSDLAALLAESGIA-LRAGQHCAQPLMAALG 364 (398)
T ss_pred HHHHHHHhc-CCCeEEeCCCCCcEEEEEeC--CcC--------------HHHHHHHHHhCCEE-EecCccchHHHHHHhC
Confidence 999999999 89999876676677777532 111 23566777777744 432221 01
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+++|+| +++++|++||+++++.|+++++.
T Consensus 365 ~~~~iRvS-~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 365 VSGTLRAS-FAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CCCEEEEE-eeccCCHHHHHHHHHHHHHHHHH
Confidence 24699999 88899999999999999988764
No 20
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=9.6e-33 Score=274.67 Aligned_cols=354 Identities=14% Similarity=0.081 Sum_probs=248.8
Q ss_pred CCccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~ 147 (480)
..|+++..+++.+..++..+.... .|+....+..++...+...++++.+++++|. ++.+++||+|+|+++..++.
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~ 103 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHH
Confidence 379999999888887774333222 1222223333455566677789999999998 56789999999999988876
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhH----HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV----RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~----~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+...... .||+ .|+++..+|++. ...++..|+ +++.+|.++++.+|+++|+++++++
T Consensus 104 ~~~~~~~----------~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~~~----- 164 (406)
T PRK09295 104 SWGNSNV----------RAGD-NIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPDGTLQLETLPALFDER----- 164 (406)
T ss_pred HhhhhcC----------CCcC-EEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCCCCCCHHHHHHhcCCC-----
Confidence 6422100 1445 788999898875 344455666 8899999888999999999998765
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
|++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+...+ ++|++++|+||++ +|.|+|+
T Consensus 165 -t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~-------~~D~~~~s~~K~~-gp~G~G~ 235 (406)
T PRK09295 165 -TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQAL-------DCDFYVFSGHKLY-GPTGIGI 235 (406)
T ss_pred -cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhc-------CCCEEEeehhhcc-CCCCcEE
Confidence 899999999999999999999999999999999999999988776655444 7899999999955 5889999
Q ss_pred EEEeCchhhHhhhcCCccccccccc------ccCcccCCCCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEYLFMQDK------LYDVRYDTGDKVIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
++++++ .+... +++..+... .....+..+...++.|.+ ...+++..+++.+...|++++.++..+++
T Consensus 236 l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 310 (406)
T PRK09295 236 LYVKEA-LLQEM----PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLM 310 (406)
T ss_pred EEEchH-hHhhC----CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 998754 33322 222221110 000000001111222222 14566777777766667888889999999
Q ss_pred HHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------C
Q psy12303 376 EYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------N 446 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------~ 446 (480)
+++.+.|.+ +++++++++. ..++++|.... .. ..++.+.|.+.|+. +..+.. .
T Consensus 311 ~~l~~~l~~-~~~~~~~~~~~~~~iv~~~~~~--~~--------------~~~~~~~L~~~gI~-v~~g~~c~~~~~~~~ 372 (406)
T PRK09295 311 HYALSQLES-VPDLTLYGPQNRLGVIAFNLGK--HH--------------AYDVGSFLDNYGIA-VRTGHHCAMPLMAYY 372 (406)
T ss_pred HHHHHHHhc-CCCEEEeCCCCCceEEEEEECC--cC--------------HHHHHHHHHhCCeE-EeccccchHHHHHHH
Confidence 999999999 8999998652 35677775321 11 13455667666643 332110 1
Q ss_pred CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 447 DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 447 ~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+..+++|+| +++++|++|||+++++|+++.+
T Consensus 373 ~~~~~iRiS-~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 373 NVPAMCRAS-LAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCCEEEEE-ccCCCCHHHHHHHHHHHHHHHH
Confidence 123589999 9999999999999999998754
No 21
>KOG1383|consensus
Probab=100.00 E-value=1.5e-32 Score=256.10 Aligned_cols=387 Identities=16% Similarity=0.169 Sum_probs=291.8
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCC-CC-ccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHH
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGH-PM-FMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEK 120 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~-p~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~ 120 (480)
...+|++|.+-+++++.+.+.....-+|.- +. +..+ .........+.+.+..+ |....+..|..+++|.++.++
T Consensus 53 ~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~-~~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm 128 (491)
T KOG1383|consen 53 FFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVY-WGEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNM 128 (491)
T ss_pred eecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEe-cCCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHH
Confidence 377999999999999999776654433322 21 2212 22334444444444433 555556789999999999999
Q ss_pred HHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEee
Q psy12303 121 MRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVP 199 (480)
Q Consensus 121 la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~ 199 (480)
++.+|+.++ ..+..|+|||+|...+.+..++++.. ++|+. .+.++++...|.+++++++.+++ +++.||
T Consensus 129 ~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~---~k~I~----~p~iv~~~~v~~a~eK~a~yf~v---~l~~V~ 198 (491)
T KOG1383|consen 129 IANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKA---QKGID----KPNIVTPQNVHAAFEKAARYFEV---ELREVP 198 (491)
T ss_pred HHHHhcCCccccCccccccchHHHHHHHHHHHHHHh---ccCCC----CccccchHHHHHHHHHHHhhEEE---EEEeee
Confidence 999999965 56889999999988888877776321 13542 44899999999999999999999 889999
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH-cCcEEEeeccccccccc-cccccCc
Q psy12303 200 SD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK-YNMWLHVDAAWGGGLLL-SKKYRHP 276 (480)
Q Consensus 200 ~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~-~~~~l~vD~a~~~~~~~-~~~~~~~ 276 (480)
++ .++++|+..+.+.++++ |.+|+.+.|++++|.++|+++|.++..+ +++.+|||+|-|++..+ ......+
T Consensus 199 ~~~~~~~~D~~k~~~~i~eN------ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~ 272 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDEN------TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEE 272 (491)
T ss_pred ccccceEecHHHHHHHhccc------eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccc
Confidence 99 57999999999999998 9999999999999999999999999999 99999999999999875 2111111
Q ss_pred ccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHH
Q psy12303 277 RLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQ 355 (480)
Q Consensus 277 ~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~ 355 (480)
.-.+..++-|++.++||++.+|.|.|+++.++++++..-.-....|+.+ .+.+.++.++|+. ..++.|++
T Consensus 273 fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg---------~y~s~TlngSR~g~~va~~wa~ 343 (491)
T KOG1383|consen 273 FDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGG---------IYASPTLNGSRPGSQVAAQWAA 343 (491)
T ss_pred cccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCc---------cccCcccccCCcccHHHHHHHH
Confidence 2234447889999999999999999999999998765433333444433 3566788888885 67899999
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc
Q psy12303 356 WRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA 435 (480)
Q Consensus 356 l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~ 435 (480)
+-.+|.+||.+..+++.+.++.|++.|++ +.++.++++|..+.+.|.-.. ++ -.++.+.|.+.
T Consensus 344 ~~~lG~eGY~~~~~~ive~~~~l~egie~-i~~i~i~gkp~vs~~~~~s~~--------------~~--i~elsd~l~~~ 406 (491)
T KOG1383|consen 344 LMSLGEEGYRENTQNIVETARKLREGIEN-IKGIKIVGKPLVSFILFGSND--------------VN--IFELSDLLRKK 406 (491)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhhhc-cccceecCCCcEEEEEccCCc--------------cc--hhhhhHHHHhc
Confidence 99999999999999999999999999999 999999999887777663211 11 12566788889
Q ss_pred ccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 436 GTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 436 g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|+.+-.++-.. .+-+|+.-....++-.++++..|++++++
T Consensus 407 GW~lnalq~P~----a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 407 GWILNALQFPA----AIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred CcCccccCCCC----ceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 98766653322 33344222222344467788877777654
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=2.8e-32 Score=269.26 Aligned_cols=342 Identities=16% Similarity=0.125 Sum_probs=242.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcC---cCCc-chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATAN---TNMF-TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
.||++..+++.+..++. .+..++. .+.. .+..++...+..+++++++++++|.++++++||+|+|+++..++.++
T Consensus 1 ~yld~aa~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLE-AMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred CcCCCcCCCCCCHHHHH-HHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 38899888888887764 3333321 1111 12223445667778999999999998888999999999999999877
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc---CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC---GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
.... +++.+|+++..+|+++...+..+ |+ +++.+|.++++.+|+++++++++++ ++
T Consensus 80 ~~~~------------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~g~~~~~~l~~~i~~~------~~ 138 (379)
T TIGR03402 80 LAAQ------------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDEEGRLDLEELRAAITDD------TA 138 (379)
T ss_pred HHhc------------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCCCCcCCHHHHHHhcCCC------cE
Confidence 5310 11338889999999987766554 55 8899999888999999999999765 88
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|++++|+|| +++|.|+|++++
T Consensus 139 lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~-------~~D~~~~s~~K-~~gp~G~g~l~v 210 (379)
T TIGR03402 139 LVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM-------NIDMLSLSGHK-LHGPKGVGALYI 210 (379)
T ss_pred EEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccC-------CCCEEEEcHHH-cCCCCceEEEEE
Confidence 9999999999999999999999999999999999999988776665555 89999999999 567999999999
Q ss_pred eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh-cC
Q psy12303 307 KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK-SM 385 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~-~~ 385 (480)
++...+ . +++.+.... .....++.++ ...+++..+++.+ .+++++..++..++++++.+.|. +
T Consensus 211 ~~~~~~------~-p~~~g~~~~--~~~~~gt~~~-----~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~- 274 (379)
T TIGR03402 211 RKGTRF------R-PLLRGGHQE--RGRRAGTENV-----PGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLAR- 274 (379)
T ss_pred CCCCCC------C-CcccCCccC--CCcCCCCccH-----HHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhh-
Confidence 765211 1 222111000 0011111111 1233344444443 45678888899999999999998 5
Q ss_pred CCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC--------------C-
Q psy12303 386 PDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN--------------D- 447 (480)
Q Consensus 386 ~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~--------------~- 447 (480)
++++++.+++. .+++.|.+.... ..++...|.+.|+. +..+... +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~gI~-v~~g~~c~~~~~~~~~~~~~lg~ 337 (379)
T TIGR03402 275 IPDARLNGDPTKRLPNTVNISFEYIE----------------GEAILLLLDMEGIC-ASSGSACTSGSLEPSHVLRAMGV 337 (379)
T ss_pred CCCEEEeCCCccCCCCEEEEEecCCC----------------HHHHHHhhccCCEE-EEchhhcCCCCCCcCHHHHHcCC
Confidence 68999876532 235555542111 23556667667744 3321100 0
Q ss_pred ----cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 ----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.+|+| +++++|++|||++++.|++++++
T Consensus 338 ~~~~~~~~vR~S-~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 338 PHTAAHGSIRFS-LSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred ChhhcCceEEEE-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 03689999 99999999999999999987653
No 23
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=4.5e-32 Score=270.11 Aligned_cols=354 Identities=18% Similarity=0.149 Sum_probs=247.2
Q ss_pred CccccccCCCChHHhHHHHHHHHc-----CcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATA-----NTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~ 147 (480)
.|+++...++.+..++ +.+..++ +++...+..++...+...++++.+++++|.+ ++++++|+|+|+++..++.
T Consensus 20 ~yld~~~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 20 VYLDSAATSQKPQQVI-DAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAY 98 (403)
T ss_pred EEEeCccccCCCHHHH-HHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 6999988887777666 4443332 2222222233444556668899999999997 5789999999999888877
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
++..... .||+ .|+++..+|++.. ..+...|. +++.+++++++.+|+++++++++++
T Consensus 99 ~~~~~~~----------~~g~-~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~i~~~----- 159 (403)
T TIGR01979 99 SWGDSNL----------KAGD-EIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDDDGTLDLDDLEKLLTEK----- 159 (403)
T ss_pred HhhhhcC----------CCCC-EEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCCCCCCCHHHHHHHhccC-----
Confidence 6532100 1445 8999999998854 44555666 8899999988999999999999765
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
|++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|++++|+||+++ |.|+|+
T Consensus 160 -~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~-------~~d~~~~s~~K~~g-p~G~g~ 230 (403)
T TIGR01979 160 -TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL-------DCDFYVFSGHKMYG-PTGIGV 230 (403)
T ss_pred -CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc-------CCCEEEEecccccC-CCCceE
Confidence 899999999999999999999999999999999999999988765544334 78999999999865 889999
Q ss_pred EEEeCchhhHhhhcCCccccccccccc-----CcccCCCCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEYLFMQDKLY-----DVRYDTGDKVIQCGRH-N-DIFKLWLQWRAKGDEGFEKQIDRLMELAE 376 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~r~-~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~ 376 (480)
+++++. ...... ++..+..... ...+....+.+..|.. . ..++++.+++.+...++++..++..++++
T Consensus 231 l~~~~~-~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~ 305 (403)
T TIGR01979 231 LYGKEE-LLEQMP----PFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTA 305 (403)
T ss_pred EEEchH-HHhcCC----CeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 998654 333221 1211110000 0000001111222222 1 34566666766655577888899999999
Q ss_pred HHHHHHhcCCCCeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee--------
Q psy12303 377 YMVKKIKSMPDKFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP-------- 444 (480)
Q Consensus 377 ~l~~~l~~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~-------- 444 (480)
++.+.|++ +++++++.++ ..++++|.+.. .. ..++.+.|.+.|+. +..+.
T Consensus 306 ~l~~~l~~-~~g~~~~~~~~~~~~~~~v~~~~~~--~~--------------~~~~~~~L~~~gI~-v~~g~~~~~~~~~ 367 (403)
T TIGR01979 306 YALERLGE-IPGLRIYGPRDAEDRGGIISFNVEG--VH--------------PHDVGTILDEEGIA-VRSGHHCAQPLMR 367 (403)
T ss_pred HHHHHHhc-CCCEEEeCCCCccccCceEEEEeCC--cC--------------HHHHHHHHhhCCEE-EcchhhhhHHHHH
Confidence 99999999 8899998643 25677776421 11 13456677777743 33211
Q ss_pred eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 445 LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 445 ~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..+..+++|+| +++++|++||+++++.|+++++.|
T Consensus 368 ~~~~~~~iRiS-~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 368 RFGVPATCRAS-FYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HhCCCCEEEEE-eccCCCHHHHHHHHHHHHHHHHHh
Confidence 11124689999 889999999999999999987654
No 24
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=8.2e-32 Score=265.60 Aligned_cols=350 Identities=18% Similarity=0.159 Sum_probs=245.8
Q ss_pred ccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHH
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~ 149 (480)
|+++...++.++.++..+...+ .++....+..++...+...++++++++++|.+ +.++++|+|+|+++..++.++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l 81 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGL 81 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHh
Confidence 7888888888877775443332 22222334445666777788999999999997 678999999999999998877
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
.... .||+ .|+++..+|++.. ..++..|. +++.|+.+.++.+|+++|+++++++ +
T Consensus 82 ~~~~-----------~~g~-~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~------~ 140 (373)
T cd06453 82 GRAN-----------KPGD-EIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDDDGQLDLEALEKLLTER------T 140 (373)
T ss_pred hhcC-----------CCCC-EEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCCCCCcCHHHHHHHhcCC------c
Confidence 5410 1334 7889999999854 34445666 8899999888999999999999764 8
Q ss_pred EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 226 FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 226 ~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|++++|+|||+++ .++|+++
T Consensus 141 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-------~~d~~~~s~~K~~~~-~g~g~~~ 212 (373)
T cd06453 141 KLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL-------GCDFLAFSGHKMLGP-TGIGVLY 212 (373)
T ss_pred eEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc-------CCCEEEeccccccCC-CCcEEEE
Confidence 89999999999999999999999999999999999999887765443333 789999999999986 7889888
Q ss_pred EeCchhhHhhhcCCcccccccccc-cCcccCCCCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKL-YDVRYDTGDKVIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI 382 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l 382 (480)
+++. ...........+....... ....+......+..+.. ...++++.+++.+...+++++.++..++++++.+.|
T Consensus 213 ~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l 291 (373)
T cd06453 213 GKEE-LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERL 291 (373)
T ss_pred EchH-HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 7653 3333221111100000000 00000000001111111 245677888888877888999999999999999999
Q ss_pred hcCCCCeEEecCC--ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------CCcccEE
Q psy12303 383 KSMPDKFYLILEP--EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------NDLPNFF 452 (480)
Q Consensus 383 ~~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------~~~~~~~ 452 (480)
++ +++++++.++ ..+.++|... ... ..++.++|.+.|+.+ ..+.. .+..+++
T Consensus 292 ~~-~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~i~~~l~~~gi~i-~~g~~~~~~~~~~~~~~~~i 353 (373)
T cd06453 292 SE-IPGVRVYGDAEDRAGVVSFNLE--GIH--------------PHDVATILDQYGIAV-RAGHHCAQPLMRRLGVPGTV 353 (373)
T ss_pred hc-CCCeEEeCCccccCCeEEEEEC--CcC--------------HHHHHHHHHHCCEEe-ccCccchhHHHHHhCCCCeE
Confidence 99 8899987533 3455666431 111 235677887877543 32111 1224699
Q ss_pred EEecccCCCCHHHHHHHHHHH
Q psy12303 453 RNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 453 R~~~~~~~~t~~di~~~~~~l 473 (480)
|++ +++.+|++|||++++.|
T Consensus 354 Ris-~~~~~t~~di~~~~~~l 373 (373)
T cd06453 354 RAS-FGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEE-ecCCCCHHHHHHHHhhC
Confidence 999 88999999999999864
No 25
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=9.7e-32 Score=265.44 Aligned_cols=345 Identities=14% Similarity=0.120 Sum_probs=239.9
Q ss_pred ccccccCC-CChHHhHHHHHHHHcCcC-----CcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHH
Q psy12303 75 FMNQLSCG-LDVVSMAGEWLIATANTN-----MFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFL 147 (480)
Q Consensus 75 ~~~~~~~~-~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~ 147 (480)
||++..++ +.|..+. +.+...+... ...|...........++++++++++|.++ .++++|+|+|+++..++.
T Consensus 2 yld~a~~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 2 YFDNAATTYPKPDEVY-EAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CccCcccCCCCCHHHH-HHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 67776655 3444444 3333332221 11222222234566778899999999965 479999999999988876
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+... +|+ .|+++..+|+++... ++..|. +++.++.++++.+|+++|+++++++
T Consensus 81 ~~~~--------------~gd-~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~~~~~----- 137 (376)
T TIGR01977 81 GLLK--------------EGD-HVITTPMEHNSVARPLECLKEQIGV---EITIVKCDNEGLISPERIKRAIKTN----- 137 (376)
T ss_pred hccC--------------CCC-EEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCCCCcCHHHHHHhcCCC-----
Confidence 6422 445 788888899887543 344466 8889998888899999999999654
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
+++|++++++|++|.+.|+++|.++|+++|+++++|++++.+..+.+.... ++|++++++|||+++|.|+|+
T Consensus 138 -~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~-------~~D~~~~s~~K~l~~p~g~g~ 209 (376)
T TIGR01977 138 -TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTEL-------AIDMLAFTGHKGLLGPQGTGG 209 (376)
T ss_pred -CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhc-------CCCEEEecccccccCCCCceE
Confidence 889999999999999999999999999999999999999999887665455 899999999999999999999
Q ss_pred EEEeCchhhHhhhcCCccc---ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEY---LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVK 380 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~ 380 (480)
+++++...+.........+ ..........+++.++... ....+++.+++.+...|++.+.++..++++++.+
T Consensus 210 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~-----~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~ 284 (376)
T TIGR01977 210 LYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNT-----PGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLN 284 (376)
T ss_pred EEEcCCcCcCceecCCCccccccccccccchhhccCCCCCH-----HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9998875222111100000 0000000000111111110 1345666777777788888999999999999999
Q ss_pred HHhcCCCCeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeC---------
Q psy12303 381 KIKSMPDKFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLN--------- 446 (480)
Q Consensus 381 ~l~~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~--------- 446 (480)
.|.+ .++++++.+. ...+++|... ... ..++.+.|.+. | +.+..+...
T Consensus 285 ~l~~-~~~~~~~~~~~~~~~~~~v~~~~~--~~~--------------~~~~~~~L~~~~g-i~v~~g~~~~~~~~~~~g 346 (376)
T TIGR01977 285 GLRE-INKVKIYGPADPANRVGVVSFTVE--GID--------------SEEVADILDEKFD-IATRTGLHCAPLAHKTIG 346 (376)
T ss_pred HHhc-CCCeEEeCCCCccccCCeEEEEEC--CCC--------------HHHHHHHHhccCC-EEEEcccccchHHHHHhC
Confidence 9998 8999987642 2456666542 111 23566777776 5 433322110
Q ss_pred -CcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 447 -DLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 447 -~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
...+.+|++ ++.++|++||++++++|++
T Consensus 347 ~~~~~~iRis-~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 347 TFATGTIRLS-LGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCCCCeEEEe-cCCCCCHHHHHHHHHHHhh
Confidence 014689999 8899999999999999976
No 26
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.9e-31 Score=268.48 Aligned_cols=397 Identities=18% Similarity=0.174 Sum_probs=263.2
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccC-CCChHHhHHHHHHHHcCcCCcch---hcChh
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSC-GLDVVSMAGEWLIATANTNMFTY---EIAPV 109 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~---~~~~~ 109 (480)
-|++++...+..+|+ .+..++++.++++...+....+ .|++...+ ...++.+...++......+...| ..+.+
T Consensus 34 ip~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~~-~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG 110 (481)
T PRK04366 34 LPEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVDT-GFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQG 110 (481)
T ss_pred CCHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCCc-ceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhH
Confidence 345565444566775 8899999999988776654333 56666633 34455555455444111233445 36677
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
..++..++.+++++++|.+. ..++.++|+.+...++.+++... ...|.. + +.+|+++...|+++...+...|
T Consensus 111 ~lel~~~~~~~la~l~G~~~-~~l~~~~GA~a~~~~l~~~r~~~----~~~Gd~--~-~~~Vlv~~~~hp~~~~~~~~~G 182 (481)
T PRK04366 111 ALELMYELQEWLKEITGMDA-VTLQPAAGAHGELTGLLMIRAYH----EARGDT--K-RTEVIVPDSAHGTNPASAAMAG 182 (481)
T ss_pred HHHHHHHHHHHHHHHhCCCc-eEEEeCcHHHHHHHHHHHHHHHh----hccCcC--C-CCEEEEcCCccHhHHHHHHHcC
Confidence 88899999999999999974 34444566666666555443211 111210 1 2379999999999999999888
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
+ +++.+|++++|.+|+++|+++++++ +++|++++++ ++|.+ +|+++|+++|+++|+|+|||+|+..+.+
T Consensus 183 ~---~vv~v~~~~~~~~D~e~L~~~i~~~------t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~ 252 (481)
T PRK04366 183 F---KVVEIPSNEDGLVDLEALKAAVGED------TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL 252 (481)
T ss_pred C---EEEEeecCCCCCcCHHHHHhhcccC------CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhc
Confidence 8 8899999888999999999999765 8899999986 89988 5899999999999999999999976533
Q ss_pred -ccccccCcccCCCCCCccceeCccccCCCcccc-----eEEEEeCchhhHhhhcCCcccccccccccCcccCC-CCccc
Q psy12303 269 -LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQC-----STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT-GDKVI 341 (480)
Q Consensus 269 -~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~-----g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~ 341 (480)
..+...+ ++|++++++|||+++|.++ |+++++++ ..... ++.+...+.. ...+.. ....+
T Consensus 253 g~~~~~~~-------GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~l----p~~~v~~~g~-~~~l~~~r~~~i 319 (481)
T PRK04366 253 GKARPGDM-------GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LAPFL----PVPVVEKDGD-RYRLDYDRPKSI 319 (481)
T ss_pred ccCCcccc-------CCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hHhhC----CCCeeeccCC-ceeecccccccC
Confidence 1222233 8999999999999988655 57777654 33322 1111110000 001111 11111
Q ss_pred cCCCC-----CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhh
Q psy12303 342 QCGRH-----NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 342 ~~~r~-----~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 416 (480)
.-.+. ..++++|..+..+|.+|+++..++...++++|++.|++ +..+.. ..+....++|.+..-...+.
T Consensus 320 ~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~---- 393 (481)
T PRK04366 320 GRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD-IYDLPY-DRPCMHEFVLSGKKLKETGV---- 393 (481)
T ss_pred CCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-hCcccC-CCCeeEEEEEECccccccCC----
Confidence 11111 23578888899999999999999999999999999999 533321 22333334443210011111
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...++.++|.+.|+..... .... ..+.+|++ ++..+|++|||++++.|+++.++
T Consensus 394 -------~~~~v~~~L~~~Gi~~~~~-~~p~~~~~~l~is-~~e~~t~edid~l~~~l~~i~~~ 448 (481)
T PRK04366 394 -------RTLDIAKRLLDYGFHPPTI-YFPLIVPEALMIE-PTETESKETLDAFIAAMKQIAEE 448 (481)
T ss_pred -------CHHHHHHHHHHCCccCCcc-ccccccCCeEEEc-ccCCCCHHHHHHHHHHHHHHHHH
Confidence 1356788888888543211 1111 14689999 88999999999999999988654
No 27
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.3e-31 Score=262.57 Aligned_cols=336 Identities=14% Similarity=0.087 Sum_probs=235.4
Q ss_pred CccccccCCCChHHhHHHHHHHHcC--cCCc--chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATAN--TNMF--TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~--~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
.|+++..+++.+..++..+.....+ .+.. .+..++...++.+++++.+++++|.++.+++||+|+|+|+..++..+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 3888888888777776544333221 1111 12223445667778899999999998888999999999999999877
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEE
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVN 229 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~ 229 (480)
..... .+|+ .|+++..+|+++...+..+.....+++.+|+++++.+|+++|+++++++ +++|+
T Consensus 81 ~~~~~----------~~g~-~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~ 143 (364)
T PLN02651 81 MHFYK----------DKKK-HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPD------TALVS 143 (364)
T ss_pred HHhcc----------CCCC-EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC------cEEEE
Confidence 54211 1335 7889999999987776554222228889999888999999999999765 88999
Q ss_pred eccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 230 CTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 230 ~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
+++++|++|.+.|+++|.++|+++|+++|||++|+.+.++.+..++ ++|++++++||| ++|.|+|+++++++
T Consensus 144 v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~-------~~D~~~~s~hK~-~gp~G~g~l~v~~~ 215 (364)
T PLN02651 144 VMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL-------GVDLMSISGHKI-YGPKGVGALYVRRR 215 (364)
T ss_pred EECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC-------CCCEEEechhhh-CCCCceEEEEEcCC
Confidence 9999999999999999999999999999999999999888877666 899999999998 67999999999875
Q ss_pred hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 310 GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
... .. .+. ..+... ...+..|+..+ ...+++..++..+.. +.++..++..++++++.+.|++..+++
T Consensus 216 ~~~-~l---~p~-~~g~~~--~~~~~~GT~~~-----~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~ 282 (364)
T PLN02651 216 PRV-RL---EPL-MSGGGQ--ERGRRSGTENT-----PLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGV 282 (364)
T ss_pred CCC-CC---Ccc-ccCCCc--cCCccCCCccH-----HHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 321 11 111 111111 01111221111 234556666666543 458888999999999999998525799
Q ss_pred EEecC--Cc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------------CC---
Q psy12303 390 YLILE--PE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------------ND--- 447 (480)
Q Consensus 390 ~~~~~--~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------------~~--- 447 (480)
+++++ +. .+++.|.+. ... ..++.++|.+ +.+..+.. -+
T Consensus 283 ~i~~~~~~~~~~~~i~~~~~~--~~~--------------~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~ 343 (364)
T PLN02651 283 RVNGPRDPEKRYPGTLNLSFA--YVE--------------GESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPE 343 (364)
T ss_pred EEECCCCcccCcCCEEEEEeC--CCC--------------HHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCCh
Confidence 99874 22 246666542 211 1345555533 33322110 01
Q ss_pred --cccEEEEecccCCCCHHHHH
Q psy12303 448 --LPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 448 --~~~~~R~~~~~~~~t~~di~ 467 (480)
..+.+|+| ++++||++|||
T Consensus 344 ~~~~~~vR~S-~~~~~t~~did 364 (364)
T PLN02651 344 EMAHGSLRLG-VGRFTTEEEVD 364 (364)
T ss_pred HHhCceEEEE-cCCCCCHHHcC
Confidence 13689999 89999999986
No 28
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=2.1e-31 Score=266.48 Aligned_cols=356 Identities=14% Similarity=0.058 Sum_probs=244.7
Q ss_pred CCCccccccCCCChHHhHHHHHHHH--cCcCCc--chhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHH
Q psy12303 72 HPMFMNQLSCGLDVVSMAGEWLIAT--ANTNMF--TYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAF 146 (480)
Q Consensus 72 ~p~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~--~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al 146 (480)
...|+++..+++.+..++..+.... .+.+.. .+..+....+..+++++.+++++|.+ +.++++|+|+|+++..++
T Consensus 32 ~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 32 KLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVA 111 (424)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHH
Confidence 3579999888877777764433322 111211 11222333455567899999999995 478999999999988887
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
....... ..||+ .|+++..+|++... .++..|+ +++.+|++.++.+|++++++.++++
T Consensus 112 ~~~~~~~----------~~~gd-~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~~~~~~~l~~~i~~~---- 173 (424)
T PLN02855 112 YTWGLAN----------LKPGD-EVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDEVLDVEQLKELLSEK---- 173 (424)
T ss_pred HHhhhhc----------CCCcC-EEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCCCcCHHHHHHHhccC----
Confidence 6531100 01445 78899899987543 4455566 8889999877889999999999764
Q ss_pred CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 223 DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
|++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+...+ ++|++++|+||+ ++|.|+|
T Consensus 174 --t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~-------~~d~~~~s~~K~-~gp~G~G 243 (424)
T PLN02855 174 --TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL-------GADFLVASSHKM-CGPTGIG 243 (424)
T ss_pred --ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc-------CCCEEEeecccc-cCCCccE
Confidence 899999999999999999999999999999999999999887665554444 789999999995 5588999
Q ss_pred EEEEeCchhhHhhhcCCcccccccccc---cCcccCC--CCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKL---YDVRYDT--GDKVIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~--~~~~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
++++++. .+... .+++.+.... +.....+ ....++.|.+ ...+++..+++.+...|++++.++..+++
T Consensus 244 ~l~~~~~-~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 318 (424)
T PLN02855 244 FLWGKSD-LLESM----PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELG 318 (424)
T ss_pred EEEEchh-hhhcC----CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9998754 33322 2222221110 0000000 0001112211 13456666677666668888999999999
Q ss_pred HHHHHHHhcCCCCeEEecCC------ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeee---
Q psy12303 376 EYMVKKIKSMPDKFYLILEP------EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPL--- 445 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~--- 445 (480)
+++.+.|++ +++++++++. ..++++|... ... ..++.+.|.++ | +.+..+..
T Consensus 319 ~~l~~~L~~-~~g~~i~~~~~~~~~~r~~~v~~~~~--~~~--------------~~~v~~~L~~~~g-I~v~~g~~c~~ 380 (424)
T PLN02855 319 TYLYEKLSS-VPGVRIYGPKPSEGVGRAALCAFNVE--GIH--------------PTDLSTFLDQQHG-VAIRSGHHCAQ 380 (424)
T ss_pred HHHHHHHhc-CCCEEEeCCCcccccCcccEEEEEEC--CcC--------------HHHHHHHhcccCC-EEEechhhhhH
Confidence 999999999 8999998642 2356666542 111 23566777776 6 43332110
Q ss_pred -----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 446 -----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 446 -----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+..+++|+| +++++|++||+++++.|+++++.
T Consensus 381 ~~~~~~g~~~~iRiS-~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 381 PLHRYLGVNASARAS-LYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred HHHHHhCCCCeEEEE-eccCCCHHHHHHHHHHHHHHHHH
Confidence 1223689999 99999999999999999988754
No 29
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1.4e-30 Score=270.68 Aligned_cols=381 Identities=16% Similarity=0.150 Sum_probs=269.6
Q ss_pred CHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHH---HHcCcCCcchh-cChhhHHHHHHHHHHHHHHhCC
Q psy12303 52 PLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLI---ATANTNMFTYE-IAPVFILMETVVLEKMRQIIGW 127 (480)
Q Consensus 52 ~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~-~~~~~~~~e~~~~~~la~~~g~ 127 (480)
+.-++++.++++-..+....+ .|++...+....++....... .+.+-.++..+ .+.+..+++.++.+|+++++|+
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~-~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm 545 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNN-SMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF 545 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccc-cCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence 788999999888776655444 566666666666665544422 23333333333 5677899999999999999999
Q ss_pred CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCC
Q psy12303 128 QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLI 207 (480)
Q Consensus 128 ~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d 207 (480)
+. ..+..++|+.|+..+++++|... ..+|.. ++.+|++|...|.+....+...|+ +++.||++++|.+|
T Consensus 546 d~-~Sl~p~aGA~gE~agL~aiR~y~----~~rge~---~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~~G~iD 614 (939)
T TIGR00461 546 DA-ISLQPNSGAQGEYAGLRVIRSYH----ESRGEN---HRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQDGNID 614 (939)
T ss_pred CC-cccCCchHHHHHHHHHHHHHHHH----HhcCCC---CCCEEEEEccccCcCHHHHHHCCC---EEEEeccCCCCCcC
Confidence 95 56777788888888998887642 222321 244899999999999999999998 89999999999999
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-hHHHHHHHHHcCcEEEeecccccccc-ccccccCcccCCCCCCc
Q psy12303 208 PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-IEEIADICQKYNMWLHVDAAWGGGLL-LSKKYRHPRLTGIERAD 285 (480)
Q Consensus 208 ~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-l~~I~~i~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~D 285 (480)
+++|++++++ .+.++++|++++++| +|.++| +++|+++|+++|.++++|+|+..+.. ..+.... ++|
T Consensus 615 le~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~-------GaD 683 (939)
T TIGR00461 615 LVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDL-------GAD 683 (939)
T ss_pred HHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCcccc-------CCC
Confidence 9999999986 233499999999988 799977 99999999999999999999976443 2222334 899
Q ss_pred cceeCccccCCCccc-----ceEEEEeCchhhHhhhcCCccccccccc-ccCcccCCCCccccCCCCCC----chHHHHH
Q psy12303 286 SVTWNPHKLMGTLLQ-----CSTIHFKQDGLLISCNQMSAEYLFMQDK-LYDVRYDTGDKVIQCGRHND----IFKLWLQ 355 (480)
Q Consensus 286 ~~~~s~hK~~~~p~~-----~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~r~~~----~l~~~~~ 355 (480)
++++|.||++++|.| .|++++++. +.. . .+.-...... ..+..-+++ ...++.+. ++++|+.
T Consensus 684 i~~~s~HKtf~~P~G~GGPg~G~i~vr~~-L~~-~---lPg~~v~~t~d~~greq~Ig---a~s~~~~g~a~~~l~a~~y 755 (939)
T TIGR00461 684 VCHLNLHKTFCIPHGGGGPGMGPIGVKSH-LIP-F---LPKHDVVSMITGIGGSKSIG---SVSAAPYGSASILPISWMY 755 (939)
T ss_pred EEEecCCccCCCCCCCCCCCeEEEEEhhh-chh-h---cCCCcccccccCCCCccccc---cccccccCcHHHHHHHHHH
Confidence 999999999995554 599998853 221 1 1111111100 000001111 11222333 4899999
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC----CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 356 WRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE----PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 356 l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
++.+|.+|+++..+....+++|+.+.|.+ . ++++.+ +....+++++.+.. +..+..+.++.++
T Consensus 756 i~~lG~~GL~~~a~~ailnAnYl~~rL~~-~--~~~l~~~~~~~~~hEfv~~~~~~~----------~~~g~~~~dIakr 822 (939)
T TIGR00461 756 IKMMGNEGLPKASVVAILNANYMATRLKD-H--YPILFVGTLKHVAHECILDLRPLK----------AKTGIEAIDVAKR 822 (939)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c--CcccccCCCCceeEEEEEeccchh----------hhcCCCHHHHHHH
Confidence 99999999999999999999999999988 3 455443 33455777765321 0011124678999
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.+.|......+ +.. .+.+-++ +...++++|||++++++.++.++
T Consensus 823 L~d~G~hapt~~-~pv-~g~lmie-pTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 823 LQDYGFHAPTLS-FPV-PGTLMVE-PTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred HHhCCeeccccC-Ccc-CCeEEEE-eeccCCHHHHHHHHHHHHHHHHH
Confidence 999996544432 222 2355555 55789999999999999887654
No 30
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=3.5e-31 Score=260.48 Aligned_cols=346 Identities=18% Similarity=0.162 Sum_probs=247.8
Q ss_pred ccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHH
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~ 149 (480)
|+++..+++.|..++..+.... .++....+..+....++-+++++.+++++|+++ .+++|++|+|+++..++..+
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l 81 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSL 81 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcc
Confidence 7888888888888876544432 222223344455567777889999999999988 88999999999999999888
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH----HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA----VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
.... .+|+ .|+++..+|++...++. ..|+ +++.+|.+.++.+|+++++++|+++ +
T Consensus 82 ~~~~-----------~~g~-~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~~~~~~~l~~~------~ 140 (371)
T PF00266_consen 82 LNPL-----------KPGD-EVLVTSNEHPSNRYPWEEIAKRKGA---EVRVIPADPGGSLDLEDLEEALNPD------T 140 (371)
T ss_dssp HHHG-----------TTTC-EEEEEESSHHHHHHHHHHHHHHTTE---EEEEEEEGTTSSCSHHHHHHHHHTT------E
T ss_pred cccc-----------cccc-ccccccccccccccccccccccchh---hhccccccccchhhhhhhhhhhccc------c
Confidence 5421 1335 78888899999884444 4455 8889999888999999999999765 9
Q ss_pred EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 226 FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 226 ~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
++|++++.+|.+|.+.|+++|.++|+++|+++++|++++.+..+.+...+ ++|++++|+|| +++|.|+|+++
T Consensus 141 ~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~-------~~D~~~~s~~K-l~gp~G~g~l~ 212 (371)
T PF00266_consen 141 RLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL-------GADFLVFSSHK-LGGPPGLGFLY 212 (371)
T ss_dssp SEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT-------TESEEEEESTS-TTSSSTEEEEE
T ss_pred ceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccccc-------ccceeeecccc-cCCCCchhhhe
Confidence 99999999999999999999999999999999999999999998887777 89999999999 88899999999
Q ss_pred EeCchhhHhhhcCCcccccccccc-cCcccCCCCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKL-YDVRYDTGDKVIQCGRH-N-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI 382 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~r~-~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l 382 (480)
++++. .....+...++....... ....+....+.+..|.. . ..+++..+++.+...|++++.++..++++++.+.|
T Consensus 213 v~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l 291 (371)
T PF00266_consen 213 VRPEA-IERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREAL 291 (371)
T ss_dssp EEHHH-HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhhh-hhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhh
Confidence 98753 344432222221110000 00000111111222222 1 34556667777777889999999999999999999
Q ss_pred hcCCCCeEEecC----CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC--------ccc
Q psy12303 383 KSMPDKFYLILE----PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND--------LPN 450 (480)
Q Consensus 383 ~~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~--------~~~ 450 (480)
.+ ++++.++++ ...++++|.+.... ...+.+.|.++| +.+..+.... ..+
T Consensus 292 ~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~~~~~~L~~~~-I~~~~G~~~~~~~~~~~~~~~ 353 (371)
T PF00266_consen 292 EE-LPGIEVLGPDDEPRRPSIVSFNLPGSD----------------ADDVVKYLEERG-IAVSTGSACAGPSLDILGMGG 353 (371)
T ss_dssp HH-TTTEEESSSSCGGBGTTEEEEEETTSS----------------HHHHHHHHHHHT-EEEEESTTTCHHHHHHHHTTT
T ss_pred hc-CCceeEeeecccccccceEEEeecCCC----------------HHHHHHHHhhcC-EEEeccCcccHHHHHHhCCCC
Confidence 99 999998762 23567777652211 246778888886 4444321111 137
Q ss_pred EEEEecccCCCCHHHHHHH
Q psy12303 451 FFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 451 ~~R~~~~~~~~t~~di~~~ 469 (480)
++|+| +++++|++|||+|
T Consensus 354 ~iRvS-~~~~nt~~dv~~l 371 (371)
T PF00266_consen 354 VIRVS-LHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEE--GTTSSHHHHHHH
T ss_pred EEEEe-ccCCCCHHHHhhC
Confidence 99999 9999999999986
No 31
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1e-30 Score=259.55 Aligned_cols=345 Identities=18% Similarity=0.212 Sum_probs=235.4
Q ss_pred CCccccccCCCChHHhHHHHHHHHc--CcCCc--chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATA--NTNMF--TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~--~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~ 148 (480)
+.|+++..+++.++.++..+..... ..+.. .+..+....+..+++++.+++++|.++++++|++|+|+++..++.+
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 4799998888877777643333221 11221 1111222345566788999999999888899999999999998877
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc---CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC---GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
+..... .+|+ +|+++..+|+++..++..+ |+ +++.+|+++++.+|+++|+++++++ +
T Consensus 84 l~~~~~----------~~g~-~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~~------~ 143 (402)
T TIGR02006 84 IAHFYK----------SKGN-HIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKSNGLIDLEELKAAIRDD------T 143 (402)
T ss_pred HHHhhc----------CCCC-EEEECCCccHHHHHHHHHHHhcCC---EEEEEccCCCCcCCHHHHHHhcCCC------C
Confidence 653100 1334 8889999999988776554 54 8899999888999999999998764 8
Q ss_pred EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 226 FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 226 ~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
++|++++++|++|.+.|+++|.++|+++|+++|+|++++.+..+.+.... ++|++++|+||+++ |.|+|+++
T Consensus 144 ~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~-------~~D~~~~s~~K~~g-p~G~G~l~ 215 (402)
T TIGR02006 144 ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL-------KVDLMSISGHKIYG-PKGIGALY 215 (402)
T ss_pred EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc-------CCCEEEEehhhhcC-CCceEEEE
Confidence 89999999999999999999999999999999999999998877665445 89999999999764 89999999
Q ss_pred EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM 385 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~ 385 (480)
+++..... . . +...+.... ..++.++..+ ...+++..+++.+ .+++++..++..++++++.+.|++
T Consensus 216 ~~~~~~~~-~---~-~~~~g~~~~--~~~~~gt~~~-----~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~- 281 (402)
T TIGR02006 216 VRRKPRVR-L---E-ALIHGGGHE--RGMRSGTLPT-----HQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKS- 281 (402)
T ss_pred EccCCCCC-C---C-ceecCCCcc--CCccCCCccH-----HHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhc-
Confidence 98653321 1 1 111111100 0111111111 1233444555544 356788889999999999999999
Q ss_pred CCCeEEecCCc-----eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH----HhcccEEEeeee-----------e
Q psy12303 386 PDKFYLILEPE-----MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM----MQAGTMMVGYQP-----------L 445 (480)
Q Consensus 386 ~~g~~~~~~~~-----~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l----~~~g~~~~~~~~-----------~ 445 (480)
++++++++++. ...++|...+ . ..+...+ ...|..+ .... .
T Consensus 282 ~~~v~~~~~~~~~~p~~~~v~f~~~~-------~-----------~~~~~~l~~i~v~~G~~c-~~~~~~~~~~l~~lg~ 342 (402)
T TIGR02006 282 IEEVYLNGDLEHRVPGNLNVSFNYVE-------G-----------ESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGI 342 (402)
T ss_pred CCCEEEeCCccccCCCeEEEEEeCcC-------H-----------HHHHHhcCCEEEechhhc-CCCCCCccHHHHHcCC
Confidence 89998875422 1234443211 0 1122222 1223221 1100 0
Q ss_pred C--CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 446 N--DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 446 ~--~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ...+++|+| +++++|++|||++++.|+++.+.
T Consensus 343 ~~~~~~~~vR~S-~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 343 NDELAHSSIRFT-IGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred ChhhcCceEEEE-ecCCCCHHHHHHHHHHHHHHHHH
Confidence 0 003689999 88999999999999999987653
No 32
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=3.9e-30 Score=254.12 Aligned_cols=346 Identities=14% Similarity=0.146 Sum_probs=232.4
Q ss_pred ccccccCCCChHHhHHHHHHHH-----cCcCCcchhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHHH
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIAT-----ANTNMFTYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~~ 148 (480)
||++..+++.++.++. .+..+ .|+........+....+++ .++.+.+.+|. +++++++|+|+|+++..++.+
T Consensus 2 yld~aa~~~~~~~v~~-~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 2 YLDNNATTMLDPKVKE-LMDPFFCDIYGNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred cccCcCCCCCCHHHHH-HHHHHHHhcCcCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 7888888877776664 33332 2332211111223334444 45556667777 567899999999999998887
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
+....+ . .+++..|+++..+|+++...+..+...+.+++.+|+++++.+|+++|++++++. +++|
T Consensus 80 ~~~~~~---~------~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~------t~lv 144 (382)
T TIGR03403 80 VYFDEI---L------KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEK------TALV 144 (382)
T ss_pred HHHhhc---c------cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccC------CeEE
Confidence 632100 0 022337999999999988776543211228899999988999999999998765 7899
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
++++++|++|.+.|+++|.++|+++|+++|+|++++.+..+.+...+ ++|++++|+|||+ +|.|+|++++++
T Consensus 145 ~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~-------~~D~~~~s~~K~~-gp~G~g~l~vr~ 216 (382)
T TIGR03403 145 SVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKA-------GVDFLSFSAHKFH-GPKGVGGLYIRK 216 (382)
T ss_pred EEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcccc-------CCCEEEEcchhhC-CCCceEEEEECC
Confidence 99999999999999999999999999999999999988776665555 8999999999985 589999999987
Q ss_pred chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 309 DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
...+ . +.+.+.... ..+..++.++ ...+++..+++.. .+.++...++..++++++.+.|++ +++
T Consensus 217 ~~~~------~-p~~~g~~~~--~~~~~gt~~~-----~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~-~~~ 280 (382)
T TIGR03403 217 GVEL------T-PLFHGGEHM--GGRRSGTLNV-----PYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLE-LPD 280 (382)
T ss_pred CCCC------C-CcccCCCCC--CCcccCCcCh-----HHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 5311 1 122111100 0011111110 1222444455433 345777788999999999999999 899
Q ss_pred eEEecCC--c-eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------------CC----
Q psy12303 389 FYLILEP--E-MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------------ND---- 447 (480)
Q Consensus 389 ~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------------~~---- 447 (480)
++++.++ . .+++.|... ... ...+...|.++|+. +..+.. -+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~L~~~gI~-v~~g~~c~~~~~~~~~v~~~~g~~~~ 343 (382)
T TIGR03403 281 VFVVGDREHRVPNTILISIK--GVE--------------GEAMLWDLNKAGIA-ASTGSACASEDLEANPVMVAIGADKE 343 (382)
T ss_pred EEEECCCCCCcCCEEEEEeC--CCC--------------HHHHHHhhccCCEE-EEchhccCCCCCCcCHHHHHcCCChH
Confidence 9998643 2 234444321 111 23455566677643 332100 00
Q ss_pred -cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 -LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 -~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.+|+| .++++|++|||++++.|++++++
T Consensus 344 ~~~~~iR~s-~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 344 LAHTAIRLS-LSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred HhCeeEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 03689999 88999999999999999987754
No 33
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=3.6e-30 Score=259.30 Aligned_cols=409 Identities=16% Similarity=0.165 Sum_probs=264.0
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCc-cCCCCCccccccCCC
Q psy12303 5 ETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQV-RTGHPMFMNQLSCGL 83 (480)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~-~~~~p~~~~~~~~~~ 83 (480)
....++|++.+- .+++.+ .. ..-|.+++...+.++|+++ +.+++++.+.++..... ...++++++....+.
T Consensus 9 ~~~~~~~~~~~~--~~~~~~---~~--~~~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~ 80 (447)
T PRK00451 9 EEDIREMLDAIG--VKSIDE---LF--ADIPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDH 80 (447)
T ss_pred HHHHHHHHHHhC--CCCHHH---HH--HhCCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCC
Confidence 455666666553 122222 11 2357888888888899865 99999999988764333 234677776543333
Q ss_pred ChHHhHHHHHH--HHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhc
Q psy12303 84 DVVSMAGEWLI--ATANT-NMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEK 160 (480)
Q Consensus 84 ~~~~~~~~~l~--~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~ 160 (480)
..+....+.+. ..... +....+.+++..+...+..+++++++|++..++++|+|||+++..++.+.+..
T Consensus 81 ~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~-------- 152 (447)
T PRK00451 81 YIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT-------- 152 (447)
T ss_pred cCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--------
Confidence 33333333321 11111 11111235556677777788999999998888999999998777666554322
Q ss_pred CCCccCCceEEEecCCCchhHHHHHHHc----CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCc
Q psy12303 161 GLSAIKGQLVMFTSDQCHYSVRSCAAVC----GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTV 236 (480)
Q Consensus 161 g~~~~~g~~~vl~~~~~h~s~~~~~~~~----g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~ 236 (480)
+|+ .|++++.+|+++.+++..+ |. +++.+|++++ .+|+++|+++++++ +++|+++++ |+
T Consensus 153 -----~g~-~Vlv~~~~~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~d~~~l~~~i~~~------t~~v~l~~p-n~ 215 (447)
T PRK00451 153 -----KRK-KVLVSGAVHPEYREVLKTYLKGQGI---EVVEVPYEDG-VTDLEALEAAVDDD------TAAVVVQYP-NF 215 (447)
T ss_pred -----CCC-EEEEeCccCHHHHHHHHHHHHhCCc---EEEEecCCCC-CCCHHHHHHhcCCC------eEEEEEECC-CC
Confidence 334 7889999999999888763 55 8899999887 99999999999765 899999998 88
Q ss_pred cccccChHHHHHHHHHcCcEEEe--eccccccccccccccCcccCCCCCCccceeCcccc-----CCCcccceEEEEeCc
Q psy12303 237 LGAFDPIEEIADICQKYNMWLHV--DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKL-----MGTLLQCSTIHFKQD 309 (480)
Q Consensus 237 ~G~~~~l~~I~~i~~~~~~~l~v--D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~-----~~~p~~~g~~~~~~~ 309 (480)
+|.++|+++|.++|+++|+|+++ |.+. .+.+..+ ..+ ++|+++.++||| +++| ++|++++++
T Consensus 216 tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~-~~~-------~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~- 284 (447)
T PRK00451 216 FGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPP-GEY-------GADIVVGEGQPLGIPLSFGGP-YLGFFATRK- 284 (447)
T ss_pred CCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCc-ccC-------CCCEEEECCCcCCCCCCCCCC-CchHHHhhH-
Confidence 99999999999999999999998 6543 2222211 233 899999999997 4444 788888765
Q ss_pred hhhHhhhcCCccccccccc-----------ccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy12303 310 GLLISCNQMSAEYLFMQDK-----------LYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEY 377 (480)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~ 377 (480)
+...........+...... ...........++ +++. ..+++++..++.++.++++++.++..+++++
T Consensus 285 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~ 363 (447)
T PRK00451 285 KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNI-CTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHY 363 (447)
T ss_pred HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccc-cccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 3333321110011000000 0000000111111 1110 1224555566777899999999999999999
Q ss_pred HHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEE-eeeee-CCcccEEEEe
Q psy12303 378 MVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMV-GYQPL-NDLPNFFRNI 455 (480)
Q Consensus 378 l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~-~~~~~-~~~~~~~R~~ 455 (480)
+.+.|++ +++++++..+....+++.+ +.. ..++.++|.++|++.. ..... .+..+++|++
T Consensus 364 l~~~L~~-~~g~~~~~~~~~~~~~v~~-~~~----------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs 425 (447)
T PRK00451 364 LAERLAE-IGGVELFDGPFFNEFVVRL-PKP----------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVC 425 (447)
T ss_pred HHHHHhh-cCCEEecCCCeEEEEEEec-CCC----------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEe
Confidence 9999999 8899986333223333432 100 2357788888875421 11111 1224689999
Q ss_pred cccCCCCHHHHHHHHHHHHHhh
Q psy12303 456 ISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 456 ~~~~~~t~~di~~~~~~l~~~~ 477 (480)
++..+|++||+++++.|+++.
T Consensus 426 -~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 426 -VTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -cCCCCCHHHHHHHHHHHHHHh
Confidence 888899999999999998864
No 34
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.98 E-value=1.2e-29 Score=268.78 Aligned_cols=396 Identities=16% Similarity=0.101 Sum_probs=267.4
Q ss_pred CHHHHHHhcCCCCCC---CCCCHHHHHHHHHhhccCCccCC-CCCccccccCCCChHHhHHHHHHH---HcCcCCcch-h
Q psy12303 34 HPAEMKAMLDLDIPE---KGLPLQKLIDDCFTTLKYQVRTG-HPMFMNQLSCGLDVVSMAGEWLIA---TANTNMFTY-E 105 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~---~~~~~~~i~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~-~ 105 (480)
-|..++..-+..+|+ .-.+..++++.++++-..+.... +..+++..+....+. +.+.+.. +.+-.++.. +
T Consensus 458 ~~~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~--~~~~~~~~~~f~~~hP~qp~e 535 (954)
T PRK05367 458 LPAALLRTSAYLTHPVFNRYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAA--AEMIPITWPEFANLHPFAPAE 535 (954)
T ss_pred CCHHHhcCCcccCCcccCCCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHH--HHHHHHhCccccccCCCChHH
Confidence 345555443333342 12378899999999887776533 344566533332222 3222222 222223333 4
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECC-ChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAP-GGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~-ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
.+.+..+++.++.+|+++++|++. +.+++ +|+.|++.+++++|... ...|.. ++.+|+++...|+|+.++
T Consensus 536 ~~qG~l~~i~e~q~~l~eltG~d~--~sl~~~~ga~ge~agL~a~r~~~----~~~G~~---~r~~vlis~~aH~snp~s 606 (954)
T PRK05367 536 QAAGYRELIDQLEAWLAEITGYDA--VSLQPNAGAQGEYAGLLAIRAYH----ESRGEG---HRDVCLIPSSAHGTNPAS 606 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC--EEECccHHHHHHHHHHHHHHHHh----hccCCC---CCCEEEEEchhhhhhHHH
Confidence 566788999999999999999985 55555 67788888887777521 112321 133799999999999999
Q ss_pred HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 185 AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+..+|+ +++.+|++.+|.+|+++|++++++. +.++++|++++|++..+..+|+++|+++|+++|+|+|||+|+.
T Consensus 607 a~~~G~---~vv~v~~d~~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~ 680 (954)
T PRK05367 607 AVMAGM---KVVVVACDENGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANM 680 (954)
T ss_pred HHHCCC---EEEEECCCCCCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcCh
Confidence 999998 8999999989999999999999763 1238899999998874445899999999999999999999998
Q ss_pred ccccccc-cccCcccCCCCCCccceeCccccCCCcccc-----eEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 265 GGLLLSK-KYRHPRLTGIERADSVTWNPHKLMGTLLQC-----STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 265 ~~~~~~~-~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~-----g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
++..... .... ++|++++|+|||++.|.|+ |.++++.. + .+++.+...... .+...
T Consensus 681 ~al~~l~~pg~~-------GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~-l--------~p~lpg~~v~~~--~~~~~ 742 (954)
T PRK05367 681 NAQVGLARPGDI-------GADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH-L--------APFLPGHPVQIA--GGETG 742 (954)
T ss_pred hhccCCCChhhc-------CCCEEEecCcccCCCCcCCCCCceEEEeeccc-c--------cccCCCCccCcC--CCCCC
Confidence 6654332 2233 8999999999999888764 48888642 1 122222110000 00001
Q ss_pred ccccCCCCC----CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecCccC-C
Q psy12303 339 KVIQCGRHN----DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPTRVR-N 411 (480)
Q Consensus 339 ~~~~~~r~~----~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~~~~-~ 411 (480)
.+..++.++ .++.+|+.++.+|.+|+++..++...+++|+.+.|++ ..++...++ +....++|.+.+.... +
T Consensus 743 ~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g 821 (954)
T PRK05367 743 IGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTG 821 (954)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCC
Confidence 112222222 4456899999999999999999999999999999988 544433222 3344566655432110 1
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. .+.++.++|.+.|...... .+.. .+.+|++ ++..++++|||+++++++.+.++
T Consensus 822 ~-----------~~~di~krL~d~G~~~~t~-~~pv-~~~l~i~-ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 822 I-----------TVDDIAKRLIDYGFHAPTM-SFPV-AGTLMVE-PTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred C-----------CHHHHHHHHHHCCCeEeec-CCcc-CCEEEEE-eeecCCHHHHHHHHHHHHHHHHH
Confidence 1 1356889999988654442 2333 5689999 88999999999999999987654
No 35
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=7.1e-30 Score=250.15 Aligned_cols=321 Identities=17% Similarity=0.148 Sum_probs=226.1
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh--HHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRS 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~ 183 (480)
++...++.+++++++++++|.++ ..+++++|||+|+..++.+... ||+ .|+++...|++ +..
T Consensus 27 ~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~--------------~g~-~vl~~~~~~~~~~~~~ 91 (356)
T cd06451 27 SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLE--------------PGD-KVLVGVNGVFGDRWAD 91 (356)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCC--------------CCC-EEEEecCCchhHHHHH
Confidence 45566777889999999999954 4578999999999988876643 445 67777778876 456
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.++..|. +++.+|.++++.+|++++++.+++. +|++|++++++|++|.+.|+++|.++|+++|+++++|++|
T Consensus 92 ~~~~~g~---~~~~v~~~~~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~ 163 (356)
T cd06451 92 MAERYGA---DVDVVEKPWGEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVS 163 (356)
T ss_pred HHHHhCC---CeEEeecCCCCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeeh
Confidence 6777787 8899999888899999999999761 2889999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc--CCcccccccccccCcccCCCCccc
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ--MSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+.+..+.+.... ++|+++.++|||+++|.|+|+++++++ ....... ....+....... ...+..+ ...
T Consensus 164 ~~g~~~~~~~~~-------~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 233 (356)
T cd06451 164 SLGGEPFRMDEW-------GVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLLL-LKYWGEG-YSY 233 (356)
T ss_pred hccCcccccccc-------CccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHHH-Hhhhccc-CCC
Confidence 876654443333 789999999999999999999998654 4444331 111111110000 0000000 000
Q ss_pred cCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc--eeEEEEEeecCccCCCchhhHH
Q psy12303 342 QCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE--MVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 342 ~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
.++-.. ...++.++++.+...++++..++..++++++.+.|.+ . |++++.++. .+.+++...+....
T Consensus 234 ~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 303 (356)
T cd06451 234 PHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA-L-GLKLLAKPELRSPTVTAVLVPEGVD-------- 303 (356)
T ss_pred CCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCCceEEEECCCCCC--------
Confidence 001111 2345556677777778889999999999999999999 4 888875432 33443322232211
Q ss_pred HHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 419 NILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.++ |+.+ .++.....++++|++ ++..+|++||++++++|+++++
T Consensus 304 ------~~~~~~~L~~~~gI~~-~~g~~~~~~~~iRis-~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 304 ------GDEVVRRLMKRYNIEI-AGGLGPTAGKVFRIG-HMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ------HHHHHHHHHHhCCEEE-ecccccccCCEEEEe-cCCCCCHHHHHHHHHHHHHHhC
Confidence 24577888888 7544 332211124699999 8888999999999999998764
No 36
>PRK02948 cysteine desulfurase; Provisional
Probab=99.98 E-value=4.8e-30 Score=253.49 Aligned_cols=346 Identities=16% Similarity=0.193 Sum_probs=235.8
Q ss_pred CccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
.||++..+++.+..++..+...+ .|+. ..+..+.....+.+++++.+++++|.+++++++++|+|+++..++.++
T Consensus 2 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTPMSKEALQTYQKAASQYFGNES-SLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCCCCHHHHHHHHHHHHhcCCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 48888888887777765333322 2222 223334555667788999999999998889999999999999998877
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEE
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVN 229 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~ 229 (480)
..... .+|+ +|+++..+|+++...+..+...+.+++.+|+++++.+|+++|+++++++ +++|+
T Consensus 81 ~~~~~----------~~g~-~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~ 143 (381)
T PRK02948 81 LNALP----------QNKK-HIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPD------TVLAS 143 (381)
T ss_pred HHhcc----------CCCC-EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCC------CEEEE
Confidence 64210 1334 7889999999987776554222228899999888999999999998654 88999
Q ss_pred eccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 230 CTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 230 ~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
+++++|+||.+.|+++|.++|+++|+++|+|++++.+..+.+...+ ++|+++.++||+++ |.|+|+++++++
T Consensus 144 ~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~-------~~d~~~~s~~K~~g-p~G~G~l~~~~~ 215 (381)
T PRK02948 144 IQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM-------GIDSLSVSAHKIYG-PKGVGAVYINPQ 215 (381)
T ss_pred EECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC-------CCCEEEecHHhcCC-CCcEEEEEEcCC
Confidence 9999999999999999999999999999999999888765554444 78999999999865 888999998765
Q ss_pred hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 310 GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
..+.. ....... ...+..++.+. ....++..+++.+ .+++++..++..++++++.+.|++ . ++
T Consensus 216 ~~~~~-------~~~~~~~--~~~~~~~t~~~-----~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-~~ 278 (381)
T PRK02948 216 VRWKP-------VFPGTTH--EKGFRPGTVNV-----PGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQT-L-PL 278 (381)
T ss_pred CCCCC-------cccCCCC--CCCcCCCCccH-----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-C-CC
Confidence 21110 0000000 00111111110 1233444445443 256788889999999999999998 5 55
Q ss_pred EEecC--Cc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee----e--------------C
Q psy12303 390 YLILE--PE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP----L--------------N 446 (480)
Q Consensus 390 ~~~~~--~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~----~--------------~ 446 (480)
++... +. ..++.|... ... ..++...|.++|+.+..... . .
T Consensus 279 ~v~~~~~~~~~~~~i~~~~~~--~~~--------------~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~ 342 (381)
T PRK02948 279 PIEVEGHSTSCLPHIIGVTIK--GIE--------------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYE 342 (381)
T ss_pred CEEEeCCCccCcCCEEEEEeC--CCC--------------HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChH
Confidence 44321 11 123333221 111 13455566677744332110 0 0
Q ss_pred CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 447 DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 447 ~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+++|+| +++++|++||+++++.|+++++.
T Consensus 343 ~~~~~lRis-~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 343 EAKQFVRFS-FGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred HhCceEEEE-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 013689999 88999999999999999987654
No 37
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.98 E-value=1.7e-29 Score=251.07 Aligned_cols=354 Identities=11% Similarity=0.072 Sum_probs=232.4
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHc----CcCCcchhcC-hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATA----NTNMFTYEIA-PVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYA 145 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~a 145 (480)
.+..||++...++.|..+. +.+..++ +.....+... .....+.+++.+ + +++|+++++++||+|+|+++..+
T Consensus 26 ~~~iyld~~a~g~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAAR-NALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL 102 (406)
T ss_pred CCcEEecCCCcCcCcHHHH-HHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence 3457898766666555444 3333322 2211122111 122334444333 4 89999888999999999999888
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHcCCCCCCe----EEeeCCCCCCCCHHHHHHHHHH
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVCGLGTDNC----VEVPSDKRGRLIPSELERLVLE 217 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~g~~~~~v----~~v~~~~~~~~d~~~L~~~i~~ 217 (480)
+...... | .++.+|+++..+|++...++ +..|+ ++ +.++.++++.+|++++++.++.
T Consensus 103 ~~~~~~~--------~----~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 167 (406)
T TIGR01814 103 LASFYKP--------T----PKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPREEETLRLEDILDTIEK 167 (406)
T ss_pred HHHhcCC--------c----CCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCCCCccCHHHHHHHHHh
Confidence 8765221 1 11337889989999965543 44565 44 5666666788999999998864
Q ss_pred HHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC
Q psy12303 218 RKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT 297 (480)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~ 297 (480)
. +.+|++|+++++++.+|.+.|+++|+++|+++|++++||++|+.+.++.+...+ ++|++++++|||+++
T Consensus 168 ~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~-------gvD~~~~s~hK~l~g 237 (406)
T TIGR01814 168 N---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW-------GVDFACWCTYKYLNA 237 (406)
T ss_pred c---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC-------CCCEEEEcCccccCC
Confidence 2 234899999999999999999999999999999999999999999988776566 899999999999987
Q ss_pred cccceEEEEeCchhhHhhhcCCcccccccccc-cC--cccCCCCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHH
Q psy12303 298 LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL-YD--VRYDTGDKVIQCGRH-N-DIFKLWLQWRAKGDEGFEKQIDRLM 372 (480)
Q Consensus 298 p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~--~~~~~~~~~~~~~r~-~-~~l~~~~~l~~~g~~~~~~~~~~~~ 372 (480)
|+| |+++++.+... .......+|....... +. ..+......++.|.. . ...++..+++.+...++++..++..
T Consensus 238 ~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (406)
T TIGR01814 238 GPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSL 315 (406)
T ss_pred CCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 777 66666554322 2222222222111100 00 000000011112211 1 3344555666665667888889999
Q ss_pred HHHHHHHHHHhcCC----CCeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee
Q psy12303 373 ELAEYMVKKIKSMP----DKFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP 444 (480)
Q Consensus 373 ~l~~~l~~~l~~~~----~g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~ 444 (480)
++++++.+.|.+ . ++++++++. ..++++|.+. .. ..++.++|.+.|+ ++..
T Consensus 316 ~l~~~l~~~l~~-~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~--------------~~~~~~~L~~~gi-~v~~-- 374 (406)
T TIGR01814 316 LLTDYLEELIKA-RCGGPPVLTIITPRDHAQRGCQLSLTHP---VP--------------GKAVFQALIKRGV-IGDK-- 374 (406)
T ss_pred HHHHHHHHHHHh-hcCCCCceEEeCCCChhhcCCeEEEEec---CC--------------HHHHHHHHHHCCE-EEec--
Confidence 999999999988 5 358887642 2346666532 11 2356777877874 3332
Q ss_pred eCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 445 LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 445 ~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.. .+.+|+|+.++++|++||++++++|++++
T Consensus 375 -~~-~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 375 -RE-PSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -cC-CCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 12 36899993378999999999999998864
No 38
>KOG1549|consensus
Probab=99.97 E-value=3.1e-30 Score=241.90 Aligned_cols=357 Identities=17% Similarity=0.135 Sum_probs=234.9
Q ss_pred cCCCCCccccccCCCChHHhHHHHHHH----HcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHH
Q psy12303 69 RTGHPMFMNQLSCGLDVVSMAGEWLIA----TANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLY 144 (480)
Q Consensus 69 ~~~~p~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~ 144 (480)
+...|.|+++..+++.++.++..+... +.|++... . +......-++.|+.+|+++|+++.+++||+|+|+||.+
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~-y-~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRS-Y-GWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccc-c-chhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 345688999998888888888633332 34444331 1 11222223456999999999998889999999999999
Q ss_pred HHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCc
Q psy12303 145 AFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDI 224 (480)
Q Consensus 145 al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~ 224 (480)
+++...... +. . - +..|++...+|+++...++.+.-.+.+|+++|++.++..|++.+++.|+++
T Consensus 118 vl~~v~~~~-------~~-~-~-~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~------ 181 (428)
T KOG1549|consen 118 VLKGVARFF-------GD-K-T-KKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSK------ 181 (428)
T ss_pred HHHHhhccc-------cc-c-c-cceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCC------
Confidence 998765421 11 0 1 238999999999999999988433349999999988999999999999997
Q ss_pred cEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEE
Q psy12303 225 PFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTI 304 (480)
Q Consensus 225 ~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~ 304 (480)
|++|.+.+.+|..|.+.|++||+.+|+++|+.+|+|+||+.|..+.|.... ++|+++++.|||++.| ++|++
T Consensus 182 T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el-------n~D~~s~s~HK~ygp~-~iGaL 253 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL-------NADFLSISAHKIYGPP-GIGAL 253 (428)
T ss_pred ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc-------CchheeeecccccCCC-cceEE
Confidence 999999999999999999999999999999999999999999999998888 9999999999999955 59999
Q ss_pred EEeC-chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q psy12303 305 HFKQ-DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK 383 (480)
Q Consensus 305 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~ 383 (480)
|++. ...+. ..+++..+. +..+ +..|+... ..++.+-.+.+... ..+.-...+..++...+...+.
T Consensus 254 Yvr~~~~~~~----~~p~~~GGg-q~r~--~rsGT~~~-----~~~~~~gsA~e~~~-~~~~~~~~~~~~~~~~ll~~i~ 320 (428)
T KOG1549|consen 254 YVRRKRPRLR----VEPPLSGGG-QERG--LRSGTVAT-----PLAVGLGSAAEFVN-KEMAYDEAIIKRLSEKLLMGIG 320 (428)
T ss_pred EEccCCCccc----ccCcccCCc-cccc--cccCCcCc-----hhhhhhHHHHHHHH-hhcchhHHHHHHHHHHHHHHHh
Confidence 9986 22221 223443332 1111 11111111 12222223333221 1112222233335556665554
Q ss_pred cCCCCeEEecC-----CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEee-----------ee-eC
Q psy12303 384 SMPDKFYLILE-----PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGY-----------QP-LN 446 (480)
Q Consensus 384 ~~~~g~~~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~-----------~~-~~ 446 (480)
...+++.+.+. |.+.++.|.|..+..-. .+........|..+..- +. ..
T Consensus 321 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~--------------~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~ 386 (428)
T KOG1549|consen 321 QSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLL--------------MDLKDVALSSGSACTSASLEPSYVLRAIGVDED 386 (428)
T ss_pred hhCchhhccCCcccccccceeeecccccCcchh--------------hhhhhhhhcccchhhcCCCCcchhhhhcCcchh
Confidence 32466655543 33445555432211100 01112222222211110 00 01
Q ss_pred CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 447 DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 447 ~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
-...++||+ ...++|++|++++++.+++.++.
T Consensus 387 ~~~~~iRis-~G~y~t~~di~~~~~~i~~~v~~ 418 (428)
T KOG1549|consen 387 LAHSSIRIS-IGRYTTEEDIDYLVDAIKKLVSL 418 (428)
T ss_pred hhcceeEEe-eeeeCcHHHHHHHHHHHHHHHHh
Confidence 115789999 88999999999999999987653
No 39
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=6e-29 Score=247.22 Aligned_cols=342 Identities=17% Similarity=0.131 Sum_probs=232.0
Q ss_pred CccccccCCCChHHhHHHHHHHHcCc--CC-cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANT--NM-FTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
.|+++...++.+..++..+....... +. ..|.......++.+++++.+++++|.++.++++++|+|+++..++.+..
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~ 98 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAIS 98 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 79999888877777764333332211 11 1233333445667789999999999977789999999998877666553
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
... .||+ .|+++..+|++.. ..++..|+ +++.++.++ ++.+|+++++++++++ +
T Consensus 99 ~~~-----------~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~l~~~i~~~------~ 157 (397)
T TIGR01976 99 RRW-----------GPGD-EVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEATGELHPDDLASLLSPR------T 157 (397)
T ss_pred hcC-----------CCCC-EEEEcCCchHhHHHHHHHHHHhcCC---EEEEEeccccCCCcCHHHHHHhcCCC------c
Confidence 210 1556 7888889998865 34455676 888999876 6889999999999764 8
Q ss_pred EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 226 FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 226 ~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
++|++++++|++|.+.|+++|.++|++||+++++|++|+.+..+.+..++ ++|++++++|||++ | ++|+++
T Consensus 158 ~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~-------~~d~~~~s~~K~~g-~-~~G~l~ 228 (397)
T TIGR01976 158 RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQAT-------GADFLTCSAYKFFG-P-HMGILW 228 (397)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHc-------CCCEEEEechhhcC-C-ceEEEE
Confidence 89999999999999999999999999999999999999876554444344 78999999999986 4 378888
Q ss_pred EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHH--------------HHHHHHHH
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDE--------------GFEKQIDR 370 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~--------------~~~~~~~~ 370 (480)
++++ .+.........+..... ...++.| +..+ ..+++..+++.+... ++++..++
T Consensus 229 ~~~~-~~~~l~~~~~~~~~~~~---~~~~~~g------t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 298 (397)
T TIGR01976 229 GRPE-LLMNLPPYKLTFSYDTG---PERFELG------TPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAY 298 (397)
T ss_pred EcHH-HHhhCCCccccCccCCC---cchhcCC------CCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHH
Confidence 7654 44333222222211110 0111111 1111 234444555544222 36777888
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecC----CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee--
Q psy12303 371 LMELAEYMVKKIKSMPDKFYLILE----PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP-- 444 (480)
Q Consensus 371 ~~~l~~~l~~~l~~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~-- 444 (480)
..++++++.+.|++ +++++++.+ +..+++.|... ... ..++.++|.+.|+.+.....
T Consensus 299 ~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~l~~~L~~~gI~v~~~~~~~ 361 (397)
T TIGR01976 299 ENRLAEYLLVGLSD-LPGVTLYGVARLAARVPTVSFTVH--GLP--------------PQRVVRRLADQGIDAWAGHFYA 361 (397)
T ss_pred HHHHHHHHHHHHhc-CCCEEEeCCCCccCCCceEEEEeC--CcC--------------HHHHHHHHHHCCeEEEeCccch
Confidence 89999999999999 778998764 24455555321 111 23567788788754332110
Q ss_pred --------eCCcccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 445 --------LNDLPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 445 --------~~~~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
.....+++|+| +++++|++||+++++.|
T Consensus 362 ~~~~~~~~~~~~~~~iRis-~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 362 VRLLRRLGLNDEGGVVRVG-LAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHhCCCCCCCeEEEE-eeccCCHHHHHHHHHhC
Confidence 11114689999 88899999999999864
No 40
>PRK14012 cysteine desulfurase; Provisional
Probab=99.97 E-value=6.4e-29 Score=246.93 Aligned_cols=345 Identities=17% Similarity=0.200 Sum_probs=229.4
Q ss_pred CCccccccCCCChHHhHHHHHHHHcC---c--CCc--chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATAN---T--NMF--TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYA 145 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~---~--~~~--~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~a 145 (480)
+.||++..+++.+..++. .+..++. . +.. .+..........+++++++++++|.++.++++++|+|+|+..+
T Consensus 4 ~iyld~a~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAE-KMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHH-HHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHH
Confidence 368999888887777764 3333321 1 111 1111111134455678899999999888899999999999999
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc---CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC---GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
+.++..... .+|+ +|+++..+|+++..++..+ |+ +++.++.++++.+|+++|+++++++
T Consensus 83 l~~l~~~~~----------~~gd-~Vi~~~~~~~s~~~~~~~~~~~g~---~~~~v~~~~~g~~d~~~l~~~i~~~---- 144 (404)
T PRK14012 83 IKGAAHFYQ----------KKGK-HIITSKTEHKAVLDTCRQLEREGF---EVTYLDPQSNGIIDLEKLEAAMRDD---- 144 (404)
T ss_pred HHHHHHhhc----------CCCC-EEEEecCccHHHHHHHHHHHhCCC---EEEEEccCCCCcCCHHHHHHhcCCC----
Confidence 887753210 1445 7889999999987776654 55 8889999888999999999999765
Q ss_pred CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 223 DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
+++|++++++|++|.+.|+++|.++|+++|+++|+|++++.+..+.+.... ++|++++|+||++ +|.|+|
T Consensus 145 --t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~-------~~D~~~~s~~K~~-gp~g~G 214 (404)
T PRK14012 145 --TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL-------KVDLMSFSAHKIY-GPKGIG 214 (404)
T ss_pred --CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC-------CCCEEEEehhhcc-CCCceE
Confidence 889999999999999999999999999999999999999988776554444 7999999999965 478999
Q ss_pred EEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI 382 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l 382 (480)
++++++..... ..+ ...+... ...+..+.... ...+.+..++... ..++.+..++..++++++.+.|
T Consensus 215 ~l~~~~~~~~~----~~~-~~~g~~~--~~~~~~gt~~~-----~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L 281 (404)
T PRK14012 215 ALYVRRKPRVR----LEA-QMHGGGH--ERGMRSGTLPT-----HQIVGMGEAARIA-KEEMATENERIRALRDRLWNGI 281 (404)
T ss_pred EEEEecCCCCC----CCc-eecCCCc--cCCccCCCcCH-----HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 99998764321 111 1111110 00111111110 1122232333332 3456777889999999999999
Q ss_pred hcCCCCeEEecCC-----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH----hcccEEEeee----------
Q psy12303 383 KSMPDKFYLILEP-----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM----QAGTMMVGYQ---------- 443 (480)
Q Consensus 383 ~~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~----~~g~~~~~~~---------- 443 (480)
++ ++++.+..++ ....++|...+ . .++...|. ..|..+....
T Consensus 282 ~~-~~~i~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~ 342 (404)
T PRK14012 282 KD-IEEVYLNGDLEQRVPGNLNVSFNYVE-G-----------------ESLIMALKDLAVSSGSACTSASLEPSYVLRAL 342 (404)
T ss_pred hc-CCCEEEeCCccccCCCEEEEEEeCcC-H-----------------HHHHHhCCCeEEEchhhhCCCCCCCCHHHHHc
Confidence 99 8999876431 12223332211 0 11222221 1121111000
Q ss_pred ee--CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 444 PL--NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 444 ~~--~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+. ....+.+|++ +++++|++|||++++.|+++++.
T Consensus 343 ~~~~~~~~~~iRls-~~~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 343 GLNDELAHSSIRFS-LGRFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred CCChhhcCceEEEE-ecCCCCHHHHHHHHHHHHHHHHH
Confidence 00 0014689999 88999999999999999987653
No 41
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=9.7e-29 Score=244.57 Aligned_cols=324 Identities=14% Similarity=0.076 Sum_probs=228.5
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH--HH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV--RS 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~--~~ 183 (480)
++.+.++.+++++++++++|++. ..++++++||.++..++....+ ||+ .|+++...|++. ..
T Consensus 37 ~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~--------------~Gd-~Vlv~~~~~~~~~~~~ 101 (401)
T PLN02409 37 SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLS--------------PGD-KVVSFRIGQFSLLWID 101 (401)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCC--------------CCC-EEEEeCCCchhHHHHH
Confidence 56777888899999999999965 4678999999988877765432 556 677777888765 35
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH--HHHcCcEEEeec
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI--CQKYNMWLHVDA 261 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i--~~~~~~~l~vD~ 261 (480)
.++..|+ +++.++.+.++.+|+++++++++++. +.++++|++++++|+||.+.|+++|.++ |+++|+++++|+
T Consensus 102 ~~~~~g~---~v~~v~~~~~~~~~~~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~ 176 (401)
T PLN02409 102 QMQRLNF---DVDVVESPWGQGADLDILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDG 176 (401)
T ss_pred HHHHcCC---ceEEEECCCCCCCCHHHHHHHHhhCc--CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEc
Confidence 5666777 88999988766789999999998631 0138899999999999999999999999 999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCC-c-ccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMS-A-EYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~ 339 (480)
+++.+..+.+...+ ++|++++++|||+++|.|+|+++++++ .++...... . .|+..... ......+..
T Consensus 177 v~s~g~~~id~~~~-------~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~ 246 (401)
T PLN02409 177 VSSIGALDFRMDEW-------GVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWADY--LKFYKLGTY 246 (401)
T ss_pred ccccCCcccccccc-------CccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHHHH--HHHHhcCCC
Confidence 99988877766566 899999999999999999999997655 344433211 1 12110000 000001100
Q ss_pred cccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-c--eeE-EEEEeecCccCCCch
Q psy12303 340 VIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-E--MVN-VSFWYLPTRVRNMPH 414 (480)
Q Consensus 340 ~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~--~~~-v~f~~~~~~~~~~~~ 414 (480)
. +.+-. ....++..+++.+...|++++.++..++++++.+.|++ .|++++.+. . +.. ++|. .|....
T Consensus 247 ~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~--~g~~~~~~~~~~~s~~v~~~~-~p~~~~---- 318 (401)
T PLN02409 247 W-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEA--WGLKLCTKKPEWRSDTVTAVV-VPEGID---- 318 (401)
T ss_pred C-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCeeccCChhhcccceEEEe-CCCCCC----
Confidence 0 01111 12345555666666778999999999999999999998 489987642 2 323 3343 232221
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.+.++..+.+..+...-+..+||++ .+.+++++||..++++|++.+++
T Consensus 319 ----------~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig-~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 319 ----------SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIG-HLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred ----------HHHHHHHHHHhCCEEEEcCCCcccCCEEEEc-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 1345566655544555544333125799999 66688999999999999987654
No 42
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=2.5e-28 Score=257.35 Aligned_cols=381 Identities=16% Similarity=0.103 Sum_probs=266.1
Q ss_pred CCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHH---HcCcCCcch-hcChhhHHHHHHHHHHHHHHhC
Q psy12303 51 LPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIA---TANTNMFTY-EIAPVFILMETVVLEKMRQIIG 126 (480)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~-~~~~~~~~~e~~~~~~la~~~g 126 (480)
.+.-++++.+.++-..+....+. ++...++...+...+.+.... +.+-+++.. +...+..++..++++++++++|
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~-~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g 582 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHS-MIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITG 582 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccC-CccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46778888887776655544332 334445554444444444333 233334333 3456777888899999999999
Q ss_pred CCCCCeEECCChh----HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC
Q psy12303 127 WQGGDSILAPGGS----ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK 202 (480)
Q Consensus 127 ~~~~~~~~t~ggt----~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~ 202 (480)
++ .++|++++| +|+++++++..+. +|... +.+|+++..+|.++...+...|+ +++.||+++
T Consensus 583 ~~--~v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd~~---r~~vli~~~aH~sn~a~a~~~G~---~vv~v~~d~ 647 (993)
T PLN02414 583 FD--SFSLQPNAGAAGEYAGLMVIRAYHLS-------RGDHH---RNVCIIPVSAHGTNPASAAMCGM---KIVVVGTDA 647 (993)
T ss_pred CC--eEEEcCCCcHHHHHHHHHHHHHHHhc-------cCCCC---CCEEEeCCCcCccCHHHHHHCCC---EEEEeccCC
Confidence 94 599999999 8888888887542 23211 23899999999999999999888 999999999
Q ss_pred CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc-ccccccCcccCCC
Q psy12303 203 RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL-LSKKYRHPRLTGI 281 (480)
Q Consensus 203 ~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~ 281 (480)
+|.+|+++|++++++..+ ++++|++++++|..|..+|+++|+++|+++|+.+++|+|+..+.. ..+....
T Consensus 648 ~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~------ 718 (993)
T PLN02414 648 KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFI------ 718 (993)
T ss_pred CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCcccc------
Confidence 999999999999985321 289999999999999999999999999999999999999987763 3333345
Q ss_pred CCCccceeCccccCCCccc-----ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-------CCc
Q psy12303 282 ERADSVTWNPHKLMGTLLQ-----CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-------NDI 349 (480)
Q Consensus 282 ~~~D~~~~s~hK~~~~p~~-----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-------~~~ 349 (480)
++|+++++.||++++|.| +|.++++.. +.. ..+.+..........+.. ..++ |++. ..+
T Consensus 719 -GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~p----~lPg~~v~~~~~~~~r~~--~s~i-Gt~~~a~~g~al~l 789 (993)
T PLN02414 719 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAP----FLPSHPVVPTGGIPRPEK--TQPL-GTISAAPWGSALIL 789 (993)
T ss_pred -CCCEEEecCCccCCcCcccCCCCeeeEEEchh-hcc----cCCCCccccCCCcccccC--CCCc-CCccchhhhhHHHH
Confidence 899999999999997765 888887652 221 223332111110000001 1111 2222 234
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
+.+|..+..+|.+|+.+..++...+++|+.+.|.+ ..++...++ +....+++... .+..... .. ..+
T Consensus 790 ~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~--~l~~~~g------~~--~~d 858 (993)
T PLN02414 790 PISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLR--PFKNTAG------IE--PED 858 (993)
T ss_pred HHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEecc--ccccccC------CC--HHH
Confidence 57788889999999999999999999999999988 566655332 22333433322 1110000 00 246
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.++|.+.|..... ..+.. .+.+|++ ++...+++|||+++++|..+.++
T Consensus 859 i~krL~d~Gihapt-~~~pv-~~~lmie-pTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 859 VAKRLMDYGFHAPT-MSWPV-PGTLMIE-PTESESKAELDRFCDALISIREE 907 (993)
T ss_pred HHHHHHHcCcEEee-ecccc-CCEEEEE-eeeeCCHHHHHHHHHHHHHHHHH
Confidence 78889888754333 22344 6799999 99999999999999999887654
No 43
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=1.4e-28 Score=244.81 Aligned_cols=372 Identities=16% Similarity=0.087 Sum_probs=237.3
Q ss_pred HHHHHHHhhccCCccCCCC-CccccccCCCChHHhHHHHHHHHcCcCCcchhc-----ChhhHHHHHHHHHHHHHHhCCC
Q psy12303 55 KLIDDCFTTLKYQVRTGHP-MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEI-----APVFILMETVVLEKMRQIIGWQ 128 (480)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~e~~~~~~la~~~g~~ 128 (480)
+|++.+.++-.......++ ..++....+..++.++.+..... . ....|.. ..+..++.+++++++++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 5667765543333222222 34444444455555554444443 1 1112222 4566788899999999999997
Q ss_pred CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC-CCCeEEeeCCCCCCCC
Q psy12303 129 GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG-TDNCVEVPSDKRGRLI 207 (480)
Q Consensus 129 ~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~-~~~v~~v~~~~~~~~d 207 (480)
...++++++|+.+...++.+++.. .+ +|+ +|+++...|+++..++..+|.. ..+++.+|+++++.+|
T Consensus 81 ~~~v~~~~~g~~~~~~~~~~~~~~-------~~----~gd-~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 148 (398)
T cd00613 81 VANASLQDEATAAAEAAGLAAIRA-------YH----KRN-KVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVD 148 (398)
T ss_pred ccceeccCchHHHHHHHHHHHHhc-------cc----CCC-EEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcC
Confidence 666888887776655555555432 10 245 7889999999999999888711 1278889988778899
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh-HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCcc
Q psy12303 208 PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI-EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADS 286 (480)
Q Consensus 208 ~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l-~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~ 286 (480)
+++|++++.++ +++|++++++ ++|.+.|+ ++|.++|++||+|+|+|++|+.+......... ++|+
T Consensus 149 ~~~l~~~i~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~-------~~d~ 214 (398)
T cd00613 149 LEALKEEVSEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY-------GADI 214 (398)
T ss_pred HHHHHHhcCCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHc-------CCCE
Confidence 99999988654 8999999985 78999885 99999999999999999998765544443334 7899
Q ss_pred ceeCccccCCCc-----ccceEEEEeCchhhHhhhcCCcccccccccccCc-----------ccCCCCccccCCCCCCch
Q psy12303 287 VTWNPHKLMGTL-----LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV-----------RYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 287 ~~~s~hK~~~~p-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~r~~~~l 350 (480)
+++++|||+ .| ++.|++++++ ............+.......... .++.+..++..+....+.
T Consensus 215 ~~~s~~K~~-~p~g~Ggp~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~ 292 (398)
T cd00613 215 VVGNLQKTG-VPHGGGGPGAGFFAVKK-ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLAL 292 (398)
T ss_pred EEeeccccC-CCCCCCCCceeEEEEhh-hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHH
Confidence 999999999 55 4466777654 34333211111111000000000 011111111112222445
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
.++..+..++.++++++.++..++++++.+.|++ +++......+....++|..... .+ . ...++.+
T Consensus 293 ~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~v~~~~~~~--~~---------~--~~~~~~~ 358 (398)
T cd00613 293 MAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKE-VGGVLPFNGPFFHEFVLRLPPL--YG---------I--RAEDLAK 358 (398)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCeeEEEEEEcCCc--ch---------H--HHHHHHH
Confidence 6667777778899999999999999999999999 6655422223344455543210 00 0 0245677
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
+|.++|+.+ ......+ .+.+|++ ++.++|++|||++++.|
T Consensus 359 ~L~~~gi~~-~~~~~~~-~~~lRis-~~~~~t~edid~~~~~L 398 (398)
T cd00613 359 ALIDGGFHA-PTMYLPV-DGTLMIE-PTETETKEELDALLEAL 398 (398)
T ss_pred hhhhcCccc-cccccCC-CCeEEEE-cCCCCCHHHHHHHHHhC
Confidence 788888543 2211123 4799999 99999999999999864
No 44
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=9.8e-28 Score=236.64 Aligned_cols=313 Identities=15% Similarity=0.193 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++.+++++|.++ +++++|+|+||..++.+... +|+ .|+++..+|++...++...|+
T Consensus 63 ~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l~~--------------~gd-~Vlv~~~~h~s~~~~~~~~G~- 124 (387)
T PRK09331 63 PPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSLCK--------------KGD-YVVLDGLAHYTSYVAAERAGL- 124 (387)
T ss_pred hHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHhcC--------------CCC-EEEECCCchHHHHHHHHHcCC-
Confidence 345667888999999975 78999999999999887753 445 788999999999998888887
Q ss_pred CCCeEEeeC--CCCCCCCHHHHHHHHHHHHH-CCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 192 TDNCVEVPS--DKRGRLIPSELERLVLERKA-KGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 192 ~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~-~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
+++.+|. ++++.+|++++++++++..+ .+..+++|+++++++++|.+.|+++|.++|+++|+++|+|++|+.+.+
T Consensus 125 --~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~ 202 (387)
T PRK09331 125 --NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM 202 (387)
T ss_pred --EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc
Confidence 8889998 67788999999999976422 234589999999999999999999999999999999999999999877
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-C
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-N 347 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~ 347 (480)
+.+...+ ++|++++++||++++|.+.|++++++ +.+........+|..... . .+.++.+ .
T Consensus 203 ~~~~~~~-------g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~~-------~----~~~~~~~~~ 263 (387)
T PRK09331 203 PVDGKKL-------GADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKEV-------E----LLGCTLRGA 263 (387)
T ss_pred CCCHHHc-------CCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCcccce-------e----eeceecCch
Confidence 6665455 78999999999999999999888754 444443322222221100 0 0111111 1
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-Cc-eeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PE-MVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~-~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
.+..+++++..+ .+. .+..++.+++++++++.|.+ ++|++++.+ +. .+++.+.. | .+.. .......-.
T Consensus 264 ~~~~~~aal~~~-~~~-~~~~~~~~~~~~~l~~~L~~-l~g~~~~~~~~~~~~i~~~~~-~-~~~~-----~~~~~~~~~ 333 (387)
T PRK09331 264 PLVTLMASFPHV-VER-VKRWDEEVKKARWFVDELEK-IEGFKQLGEKPRNHDLMKFET-P-SFDE-----IAKKHKRRG 333 (387)
T ss_pred HHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhc-CCCEEEeccCcCcCCeEEEeC-C-chhH-----Hhhhccccc
Confidence 234444454432 122 23456678899999999999 889999753 22 22333321 2 2110 000000012
Q ss_pred HHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 426 PILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.+.|.+.|+..+. .+...++|+. +..+|++|+++++++|+++.++
T Consensus 334 ~~~~~~L~~~gI~~~~----~~~~~i~ri~--~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 334 FFLYEELKKRGIHGIK----PGATKEFKLS--TYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred hhHHHHHHHcCceEEc----cCCceEEEEE--eccCCHHHHHHHHHHHHHHHHh
Confidence 4577888888864222 2223566765 3447999999999999988764
No 45
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=2.6e-28 Score=239.50 Aligned_cols=321 Identities=14% Similarity=0.118 Sum_probs=223.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCC--CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HHHH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGG--DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VRSC 184 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~~~ 184 (480)
+.+.++.+++++.+++++|+++. .+++|+|||+|+..++..+.. +|+.+|+++...|.+ +...
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~--------------~~~~vlv~~~~~~~~~~~~~ 96 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP--------------KDGKLLVVINGAYGARIVQI 96 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC--------------CCCeEEEEeCChhhHHHHHH
Confidence 44566667889999999999753 689999999999988877643 335467767667766 3566
Q ss_pred HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 185 AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
++..|. +++.+|.++++.+|+++++++++++ ..+++|.+++.+|+||.+.|+++|.++|++||++++||++++
T Consensus 97 a~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~ 169 (363)
T TIGR02326 97 AEYLGI---PHHVVDTGEVEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSS 169 (363)
T ss_pred HHHcCC---ceEEEeCCCCCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccc
Confidence 788887 8889999888899999999998763 125678899999999999999999999999999999999999
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC-cccCCCCccccC
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD-VRYDTGDKVIQC 343 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 343 (480)
.+..+.+...+ ++|+++.++|||+++|.|.|+++++++. +........++.......+. .....+... .
T Consensus 170 ~g~~~~~~~~~-------~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--f 239 (363)
T TIGR02326 170 FGGIPIDIAEL-------HIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMEDNHGKWR--F 239 (363)
T ss_pred ccCcccchhhc-------CccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhccCCCCC--C
Confidence 88776665555 7899999999999999999999987653 33322111111100000000 000000000 0
Q ss_pred CCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeE-EEEEeecC-ccCCCchhhH
Q psy12303 344 GRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVN-VSFWYLPT-RVRNMPHEKR 417 (480)
Q Consensus 344 ~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~-v~f~~~~~-~~~~~~~~~~ 417 (480)
+.. ....++..+++.+..+ +++++.++..++++++.+.|++ . |++++.++ ..++ .+|.+.+. ...
T Consensus 240 t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~------- 310 (363)
T TIGR02326 240 TSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRA-L-GFEPLLDDEIQSPIITSFYSPEDPDYR------- 310 (363)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCceEEEEECCCCCCCC-------
Confidence 111 1334455556555444 4788889999999999999998 4 88876543 3333 33433211 111
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.++|+. +.++.... .+++|++ .+..++.+|++++++.|++++.
T Consensus 311 -------~~~v~~~L~~~gi~-v~~g~~~~-~~~iRi~-~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 311 -------FADFYQRLKEQGFV-IYPGKVSQ-VDCFRIG-NIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred -------HHHHHHHHHHCCEE-EECCcCCC-CCEEEEe-cCCCCCHHHHHHHHHHHHHHhC
Confidence 23566778778744 44432222 4689999 5556899999999999998764
No 46
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=6.6e-28 Score=235.65 Aligned_cols=304 Identities=15% Similarity=0.151 Sum_probs=208.7
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHH----H----------cCcCCcchhcCh
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIA----T----------ANTNMFTYEIAP 108 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~----~----------~~~~~~~~~~~~ 108 (480)
...+|++|.+.+.|...+.++-. ..|.+|.++..-+.--.-+...+.+. + ....+-. ..++
T Consensus 27 ~~~~p~~g~~~~~i~~~l~~l~~----~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka-~gss 101 (444)
T TIGR03531 27 QRKIPEEGWDDETIELFLHELSV----MDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKA-AGSS 101 (444)
T ss_pred cCcCCccCCCHHHHHHHHHHHhc----CCcCCCccccCcCcccceeechhhhhcccceecCCCCcccccccCccc-cCcc
Confidence 47799999999999999887643 12222222222221111111111110 0 0000101 1234
Q ss_pred hhHHHHHHHHHHHHHHhCCCC-CCeEECCChh-HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 109 VFILMETVVLEKMRQIIGWQG-GDSILAPGGS-ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
....+..++..++++++|.+. ..+++++||| .++.+++.+++.+. .+|+ .|+++..+|.|+.+++.
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~-----------~~gd-~VI~p~~th~S~~kAi~ 169 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKR-----------PKAK-YVIWPRIDQKSCIKAIS 169 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcC-----------CCCC-EEEEECcChHHHHHHHH
Confidence 456788889999999999974 3488999999 78888887775321 0235 67777789999999999
Q ss_pred HcCCCCCCeEEeeC---CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 187 VCGLGTDNCVEVPS---DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 187 ~~g~~~~~v~~v~~---~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
++|+ +.++|++ ++++.+|+++|+++|++... ..+.+|+.+.+++..|..+|+++|.++|++||+|+|+|+||
T Consensus 170 ~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAy 244 (444)
T TIGR03531 170 TAGF---EPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAY 244 (444)
T ss_pred HcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcC
Confidence 9999 6778884 35689999999999985311 22444554444556678999999999999999999999999
Q ss_pred cccccccccccCccc-CCCC--CCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 264 GGGLLLSKKYRHPRL-TGIE--RADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~~~--~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
+.+..... . .. .+.+ .+|++++|+||++.+|.++|+++++++++...... .|...
T Consensus 245 g~~~~~~~---~-~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~---~y~g~--------------- 302 (444)
T TIGR03531 245 GLQSNKYM---E-LINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK---SYPGR--------------- 302 (444)
T ss_pred cCcChhhh---h-hhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH---hccCC---------------
Confidence 97442211 1 11 2221 47999999999999998888888888877665432 12100
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecC
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILE 394 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~ 394 (480)
.....++.+|+++..+|.+++++++++..++++++.+.|++ +. |-+++..
T Consensus 303 ---~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~-l~~~~~~~~~~~ 355 (444)
T TIGR03531 303 ---ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQK-LAERHGERLLDT 355 (444)
T ss_pred ---CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCcEeecC
Confidence 00124678999999999999999999999999999999887 42 5566543
No 47
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=3.2e-27 Score=230.92 Aligned_cols=291 Identities=17% Similarity=0.141 Sum_probs=206.0
Q ss_pred ccccccCCCChHHhHHHHHHHHcC--cCCcc--hhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIATAN--TNMFT--YEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~--~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
|+++...++.+..+...+.....+ .+... +..+....++.+++++++++++|.+++++++|+|+|+++..++.++.
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~ 80 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLA 80 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 788888887777766433332211 22221 22233345667789999999999988889999999999999888765
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEe
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNC 230 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~ 230 (480)
.. +. .+|+..|+++..+|+++......+...+.+++.+|.++++.+|+++|+++++++ +++|++
T Consensus 81 ~~--------~~--~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~~ 144 (353)
T TIGR03235 81 RA--------GE--QKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPD------TLLVSI 144 (353)
T ss_pred Hh--------cc--cCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCC------CEEEEE
Confidence 42 10 133348999999999987776554221228899999888999999999998654 899999
Q ss_pred ccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch
Q psy12303 231 TSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG 310 (480)
Q Consensus 231 ~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~ 310 (480)
++++|++|.+.|+++|.++|+++|+|+|+|++++.+..+.+...+ ++|++++++|||+ +|.|+|+++++++.
T Consensus 145 ~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~-------~~D~~~~s~~K~~-gp~g~g~l~~~~~~ 216 (353)
T TIGR03235 145 MHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD-------RIDLISCSGHKIY-GPKGIGALVIRKRG 216 (353)
T ss_pred EcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc-------CCCEEEeehhhcC-CCCceEEEEEccCc
Confidence 999999999999999999999999999999999999887766555 7999999999995 58999999998763
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
.... ... ++...... ...+..+ +... ..+++..+++.+ .++.++..++..++++++++.|++ +|+
T Consensus 217 ~~~~--~~~-~~~~~~~~--~~~~~~g------t~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~--~g~ 282 (353)
T TIGR03235 217 KPKA--PLK-PIMFGGGQ--ERGLRPG------TLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT--LGV 282 (353)
T ss_pred cccc--ccC-ceeeCCCC--cCccccC------CCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc--CCe
Confidence 2111 111 22111110 0011111 1111 234444555543 357788889999999999999988 899
Q ss_pred EEecCCc---eeEEEEE
Q psy12303 390 YLILEPE---MVNVSFW 403 (480)
Q Consensus 390 ~~~~~~~---~~~v~f~ 403 (480)
+++.++. ..+++|.
T Consensus 283 ~~~~~~~~~~~~i~~~~ 299 (353)
T TIGR03235 283 KLNGDPAETIPHILNFS 299 (353)
T ss_pred EEeCCcccccCCEEEEE
Confidence 9886543 2345553
No 48
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=9.4e-27 Score=228.19 Aligned_cols=343 Identities=14% Similarity=0.132 Sum_probs=228.9
Q ss_pred ccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC--CeEECCChhHHHHHHHHHHHHhcCch
Q psy12303 79 LSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG--DSILAPGGSISNLYAFLAARHKMFPT 156 (480)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~ 156 (480)
.|+|..+...+.+.++...+. | .+...++...+++.+++++|+++. .+++++|||+++..++..+..
T Consensus 4 ~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~----- 72 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP----- 72 (355)
T ss_pred cCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC-----
Confidence 456655555555555542222 2 223346677889999999999764 577899999999999877653
Q ss_pred hHhcCCCccCCceEEEecCCCchh-HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCC
Q psy12303 157 YKEKGLSAIKGQLVMFTSDQCHYS-VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTT 235 (480)
Q Consensus 157 ~~~~g~~~~~g~~~vl~~~~~h~s-~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~ 235 (480)
+++.+++++...|.+ +..+++..|. +++.++.++++.+|+++++++++++ ..+++|++++++|
T Consensus 73 ---------~~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~ 136 (355)
T TIGR03301 73 ---------RDGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSEYEPPDLNRIEEALAAD----PDITHVATVHHET 136 (355)
T ss_pred ---------CCCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCCCCCCCHHHHHHHHHhC----CCceEEEEEecCC
Confidence 334466666666654 5567788887 7888998878899999999999753 2367888899999
Q ss_pred ccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhh
Q psy12303 236 VLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISC 315 (480)
Q Consensus 236 ~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~ 315 (480)
++|.+.|+++|.++|++||+++++|++++.+..+.+...+ ++|+++.++|||+++|.|+|+++++++ .++..
T Consensus 137 ~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~-------~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~ 208 (355)
T TIGR03301 137 TTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEEL-------DVDALIASANKCLEGVPGFGFVIARRD-LLEAS 208 (355)
T ss_pred cccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhc-------CccEEEecCCcccccCCceeEEEECHH-HHHHh
Confidence 9999999999999999999999999998877654443333 789999999999988888999987654 44443
Q ss_pred hcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 316 NQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 316 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.....++..............+. ...+.. ....++..+++.+..++ +++..++.+++++++.+.|++ . |++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~-~-g~~~~~ 284 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGK--WRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA-L-GFQPLL 284 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCC--CCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH-c-CCeeec
Confidence 32111221110000000000000 001111 12234445666655555 788889999999999999998 4 888755
Q ss_pred CCc--eeE-EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHH
Q psy12303 394 EPE--MVN-VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 394 ~~~--~~~-v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
++. .+. +++.. |... .. + ..++.++|.++|++ +.+..... .+++|++ ++..++++|+++++
T Consensus 285 ~~~~~~~~~~~~~~-~~~~-~~---------~--~~~~~~~l~~~gi~-i~~~~~~~-~~~iRis-~~~~~~~~~i~~~~ 348 (355)
T TIGR03301 285 PERWQSPIIVSFLY-PDDP-DF---------D--FDDFYQELKERGFV-IYPGKLTL-ADTFRIG-TIGEIDAADIERLL 348 (355)
T ss_pred CCCCCCCcEEEEEC-CCCC-cc---------h--HHHHHHHHHHCCEE-EECCcccc-ccEEEEe-cCCCCCHHHHHHHH
Confidence 432 222 33332 2210 00 0 23577888888854 44332222 3689999 77778999999999
Q ss_pred HHHHHh
Q psy12303 471 TEMDRL 476 (480)
Q Consensus 471 ~~l~~~ 476 (480)
+.|+++
T Consensus 349 ~~l~~~ 354 (355)
T TIGR03301 349 EAIKDA 354 (355)
T ss_pred HHHHhh
Confidence 999875
No 49
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.96 E-value=1.4e-27 Score=254.02 Aligned_cols=367 Identities=13% Similarity=0.052 Sum_probs=235.8
Q ss_pred CCccccccCCCChHHhHHHHHHHHc---CcCCc-chhcChhhHHHHHHHHHHHHHHhCCCCC--CeEECCChhHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATA---NTNMF-TYEIAPVFILMETVVLEKMRQIIGWQGG--DSILAPGGSISNLYAF 146 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~--~~~~t~ggt~a~~~al 146 (480)
-.||++..+++.++..+.+.+..+. ..|.+ .+..+...+++.+++++.+++++|+++. .++||+|+|+|+..++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva 114 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG 114 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence 4799999877766555555554332 12222 2233455566777889999999999654 5799999999988776
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--------CCCCCCH--HHHHHHHH
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--------KRGRLIP--SELERLVL 216 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--------~~~~~d~--~~L~~~i~ 216 (480)
..... .+|+ +|+++...|.|+......+...+.++..++++ ..+.+++ ++|++.++
T Consensus 115 ~~l~~-------------~~gd-~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 180 (805)
T PLN02724 115 ETFPW-------------SSES-HFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNT 180 (805)
T ss_pred HHCCC-------------CCCC-eEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhh
Confidence 54421 1445 77888899998775544332112278888876 3444544 56766643
Q ss_pred HH----HHCCCccEEEEeccCCCccccccChHHHHHHHHHc--------CcEEEeeccccccccccccccCcccCCCCCC
Q psy12303 217 ER----KAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--------NMWLHVDAAWGGGLLLSKKYRHPRLTGIERA 284 (480)
Q Consensus 217 ~~----~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--------~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~ 284 (480)
+. ...+.++++|++++.+|.+|.+.|+++|.++++.. ++++++|+|++.+..+.+..++ ++
T Consensus 181 ~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~-------~~ 253 (805)
T PLN02724 181 SKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY-------PA 253 (805)
T ss_pred hhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc-------CC
Confidence 11 11123478999999999999999999876655542 3579999999999998888777 89
Q ss_pred ccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccc-------cc-------CcccCCCCccccCCCCCCch
Q psy12303 285 DSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK-------LY-------DVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 285 D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-------~~~~~~~~~~~~~~r~~~~l 350 (480)
|++++|+|||+++|.|+|+++++++ .+... .+.+..+... .+ ...++.|+.++ ...+
T Consensus 254 Dfl~~S~HK~~GgP~G~G~L~vr~~-~~~~l---~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~-----~~i~ 324 (805)
T PLN02724 254 DFVVVSFYKIFGYPTGLGALLVRRD-AAKLL---KKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISF-----LSIA 324 (805)
T ss_pred CEEEEecceeccCCCCceEEEEehh-hhhhh---cCCccCCCceEEEecccceeeccccHHHHhcCCCcch-----hHHH
Confidence 9999999999999999999999865 33222 2222222110 00 11222222222 2455
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------CeEEecCC--------ceeEEEEEeecCccCCCchhh
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD------KFYLILEP--------EMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~------g~~~~~~~--------~~~~v~f~~~~~~~~~~~~~~ 416 (480)
++..+++.+..-+++++.++..+|++++.+.|.+ ++ +++++++. ..+++.|.............+
T Consensus 325 ~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~-l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~ 403 (805)
T PLN02724 325 ALRHGFKLLNRLTISAIAMHTWALTHYVANSLRN-LKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHRE 403 (805)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHh-ccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHH
Confidence 6666777765567888889999999999999998 76 58888643 457888876532211111100
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeee----------------------------eeCCc-ccEEEEecccCCCCHHHHH
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQ----------------------------PLNDL-PNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~----------------------------~~~~~-~~~~R~~~~~~~~t~~di~ 467 (480)
. ..+. ...+.....|. ++.+. ...+. .+++|+| .++++|++|||
T Consensus 404 v-~~l~----~~~gI~vR~G~-~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS-~g~ynt~eDvd 476 (805)
T PLN02724 404 V-EKLA----SLSGIQLRTGC-FCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVS-FGYMSTFEDCQ 476 (805)
T ss_pred H-HHHH----HhcCcEEeecc-ccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEE-cCccCCHHHHH
Confidence 0 0010 00111122221 11110 00111 3799999 88999999999
Q ss_pred HHHHHHHHhh
Q psy12303 468 FLLTEMDRLG 477 (480)
Q Consensus 468 ~~~~~l~~~~ 477 (480)
++++.|++..
T Consensus 477 ~lv~~l~~~~ 486 (805)
T PLN02724 477 KFIDFIISSF 486 (805)
T ss_pred HHHHHHHHHh
Confidence 9999999853
No 50
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=5.8e-26 Score=222.52 Aligned_cols=309 Identities=16% Similarity=0.214 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|. .++++++|+|+++..++.+... ||+ .|+++..+|++...++...|+
T Consensus 46 ~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~g~--- 105 (361)
T cd06452 46 IKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCE--------------KGD-WVVVDGLAHYTSYVAAERAGL--- 105 (361)
T ss_pred HHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCcchHHHHHHHhcCC---
Confidence 44566779999999 4599999999999988877643 445 788888999999888888888
Q ss_pred CeEEeeCCCC--CCCCHHHHHHHHHHHHHC-CCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 194 NCVEVPSDKR--GRLIPSELERLVLERKAK-GDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 194 ~v~~v~~~~~--~~~d~~~L~~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++.+.+ +.+|+++|++++++..+. +.++++|++++++|++|.+.|+++|.++|+++|+++|+|+||+.+..+.
T Consensus 106 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~ 185 (361)
T cd06452 106 NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPV 185 (361)
T ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCC
Confidence 8889998765 489999999999764321 2348899999999999999999999999999999999999999776544
Q ss_pred ccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~ 349 (480)
+...+ ++|+++.|+||++++|.++|+++++ +...........++-... ... ...+.+ ..+
T Consensus 186 ~~~~~-------~~d~~~~s~~K~l~~~~~~G~l~~~-~~~~~~l~~~~~~~~~~~---------~~~--~~~~~~~~~~ 246 (361)
T cd06452 186 SGKEL-------GADFIVGSGHKSMAASAPIGVLATT-EEWADIVFRTSQMFKIKE---------VEL--LGCTLRGAPL 246 (361)
T ss_pred CHHHc-------CCCEEEecCCccccCCCCeEEEEEC-HHHHHHHhccccccccce---------eee--eccccCchHH
Confidence 44344 7899999999999988889988875 444444432222211000 000 001111 123
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
..++.++..+ .+.+ +..++..++++++.+.|++ ++|++++.+ ...+.+.+.. + .+.. .......-..+
T Consensus 247 ~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~-l~g~~v~~~~~~~~n~~~~~~-~-~~~~-----~~~~~~~~~~~ 316 (361)
T cd06452 247 VTLMASFPHV-KERV-KRWDEEVEKARWFVAELEK-IEGIKQLGEKPKNHDLMFFET-P-SFDE-----IAKKHKRRGYF 316 (361)
T ss_pred HHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhc-CCCeEEECCCCCCCceEEEEc-C-Ccch-----hhhhccccchh
Confidence 3444444432 2333 3445556677999999999 889998742 2233343432 1 1100 00000000125
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.|.++|+.. . ..+...++|+++ ...+++|++.++++|+++.
T Consensus 317 ~~~~L~~~gI~~-~---~~~~~~~~ri~~--~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 317 LYSELKKRGIHG-I---KPGLTRYFKLST--YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHcCceE-E---cCCCceEEEEEe--cCCCHHHHHHHHHHHHHHh
Confidence 778888888652 1 123245899883 3469999999999998764
No 51
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=4.1e-26 Score=224.46 Aligned_cols=322 Identities=16% Similarity=0.116 Sum_probs=218.9
Q ss_pred hhhHHHHHHHHHHHHHHhCCCC--CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH--HH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQG--GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV--RS 183 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~--~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~--~~ 183 (480)
+.+.+...++++.+++++|.++ ..+++++|||+++..++..+.. +|+.+++.+ ..++.. ..
T Consensus 33 ~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~--------------~~~~vlv~~-~~~~~~~~~~ 97 (368)
T PRK13479 33 DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP--------------RDGKVLVPD-NGAYGARIAQ 97 (368)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC--------------CCCeEEEEe-CCchHHHHHH
Confidence 4445677889999999999964 3477999999999999887753 335344444 444443 46
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.++..|+ +++.+|.++++.+|++++++++++. ..+++|.+++++|++|.+.|+++|.++|+++|+++++|+++
T Consensus 98 ~~~~~g~---~~~~i~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~ 170 (368)
T PRK13479 98 IAEYLGI---AHVVLDTGEDEPPDAAEVEAALAAD----PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMS 170 (368)
T ss_pred HHHHcCC---cEEEEECCCCCCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccc
Confidence 7777787 8889999877889999999998753 12568899999999999999999999999999999999998
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+.+..+.+...+ ++|++++++|||+++|.|+|+++++++ .+........+|..............+.+.+
T Consensus 171 ~~g~~~~~~~~~-------~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (368)
T PRK13479 171 SFGAIPIDIAEL-------GIDALISSANKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLDLYDQWAYMEKTGQWRF-- 240 (368)
T ss_pred ccCCcccccccc-------CceEEEecCccccccCCCceEEEECHH-HHHHhhcCCCCeeecHHHHHhhhcccCCCCC--
Confidence 877655544444 789999999999998999999998654 4443332222221110000000000011100
Q ss_pred CCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc--e-eEEEEEeecCccCCCchhhHH
Q psy12303 344 GRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE--M-VNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 344 ~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~--~-~~v~f~~~~~~~~~~~~~~~~ 418 (480)
+.. ....++..++..+..+ ++++.+++..++++++.+.|++ . |++++.++. . ..++|...... +.+
T Consensus 241 t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~--~~~----- 311 (368)
T PRK13479 241 TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRA-L-GFEPLLDAEIQSPIIVTFHAPADP--AYD----- 311 (368)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCchhcCceEEEEECCCCC--CcC-----
Confidence 111 1234455566555333 4788889999999999999999 4 888764432 2 23445432111 000
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++|+++ .+..... .+++|++ ...++|++|++++++.|++++++
T Consensus 312 ------~~~l~~~L~~~gi~v-~~g~~~~-~~~iRis-~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 312 ------FKEFYERLKEQGFVI-YPGKLTQ-VDTFRIG-CIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred ------HHHHHHHHHHCCEEE-ecCCCCC-CCEEEEe-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 245778888888544 3322222 3589998 55678999999999999988765
No 52
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.4e-26 Score=216.16 Aligned_cols=340 Identities=18% Similarity=0.138 Sum_probs=248.6
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL 169 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~ 169 (480)
+.+.+...+.... .+|.+..+..++.+.+..+|+.+. .-.+++++||.|+..++..+.+ ||+.
T Consensus 19 ~V~~am~~~~~~h--~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--------------pgdk 82 (383)
T COG0075 19 RVLLAMARPMVGH--RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--------------PGDK 82 (383)
T ss_pred HHHHHhcCCCCCC--CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--------------CCCe
Confidence 3344444444443 378889999999999999999985 5566889999988888877765 5564
Q ss_pred EEEecCCCch-hHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHY-SVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~-s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
++++....+. -+...++.+|. +++.+.....-.+|+++++++|+++ ...++|.++|..|+||...|+++|++
T Consensus 83 VLv~~nG~FG~R~~~ia~~~g~---~v~~~~~~wg~~v~p~~v~~~L~~~----~~~~~V~~vH~ETSTGvlnpl~~I~~ 155 (383)
T COG0075 83 VLVVVNGKFGERFAEIAERYGA---EVVVLEVEWGEAVDPEEVEEALDKD----PDIKAVAVVHNETSTGVLNPLKEIAK 155 (383)
T ss_pred EEEEeCChHHHHHHHHHHHhCC---ceEEEeCCCCCCCCHHHHHHHHhcC----CCccEEEEEeccCcccccCcHHHHHH
Confidence 5555444433 37778888888 8888888877789999999999854 33779999999999999999999999
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
+||+||..++||++-+.|....+...| ++|++...++|.+++|+|.|++.++++.+-.......++|+..-..
T Consensus 156 ~~k~~g~l~iVDaVsS~Gg~~~~vd~w-------giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~ 228 (383)
T COG0075 156 AAKEHGALLIVDAVSSLGGEPLKVDEW-------GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKK 228 (383)
T ss_pred HHHHcCCEEEEEecccCCCcccchhhc-------CccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHH
Confidence 999999999999999999998888888 9999999999999999999999998765433222222323322111
Q ss_pred ccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeEEEEEee
Q psy12303 329 LYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVNVSFWYL 405 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~f~~~ 405 (480)
. ...++-. ..++.+-+. ...++-.+++.+-.+|++++++|++.+++.+++.+++ .|++++.++ .+.+++..+.
T Consensus 229 ~-~~~~~~~-~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~a--lGl~~~~~~~~~s~tvta~~~ 304 (383)
T COG0075 229 W-LKYMEKK-GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEA--LGLELFADPERRSPTVTAIKV 304 (383)
T ss_pred H-HHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCccccCcccCCCceEEEEC
Confidence 1 0011000 111122222 3345666777778899999999999999999999999 799998743 2445555566
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|..+++ +++...+.+++.+.+..+...-...++||..+. +.+..|+..++.+|+..+++
T Consensus 305 P~g~~~--------------~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~ 363 (383)
T COG0075 305 PEGVDD--------------KKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALRE 363 (383)
T ss_pred CCCCCc--------------HHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHH
Confidence 665432 233346666655666543322224699999666 88999999999999988765
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=7.6e-26 Score=221.02 Aligned_cols=331 Identities=15% Similarity=0.150 Sum_probs=239.1
Q ss_pred ChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhc
Q psy12303 84 DVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEK 160 (480)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~ 160 (480)
.|..+...+..+..+.+. .|....+..++.+.+.+++.+.+|. ++ .++++|+|+++|+..++.+..+
T Consensus 42 ~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~--------- 111 (393)
T COG0436 42 TPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLN--------- 111 (393)
T ss_pred CCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcC---------
Confidence 344444344444443332 4557788899999999999999884 44 4499999999999999999877
Q ss_pred CCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC---CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc
Q psy12303 161 GLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD---KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL 237 (480)
Q Consensus 161 g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~---~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~ 237 (480)
||| .|+++++.++++.....++|. +++.++++ .++.+|+++|+++++++ |++|++++|+|||
T Consensus 112 -----pGD-eVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~k------tk~i~ln~P~NPT 176 (393)
T COG0436 112 -----PGD-EVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPK------TKAIILNSPNNPT 176 (393)
T ss_pred -----CCC-EEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCcc------ceEEEEeCCCCCc
Confidence 667 799999999999999999998 78889875 37999999999999986 9999999999999
Q ss_pred ccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCccc--CCCCCCccceeCccccCCCc-ccceEEEEeCchh
Q psy12303 238 GAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRL--TGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGL 311 (480)
Q Consensus 238 G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~--~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~ 311 (480)
|++.+ +++|+++|++||+|++.|++|....+....... .+ .+....-+..-|++|.++.+ +.+|+++..++.+
T Consensus 177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s-~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS-ILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCC-HhhcCCCcceEEEEecccccccccccceeEeecChHHH
Confidence 99965 899999999999999999999987764321111 11 11111224445889999854 7899999775655
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG----DEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g----~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
...... ...++.. | ...+...++...+. .+..+.+.+...+.++.+.+.|.+ .+
T Consensus 256 ~~~~~~-~~~~~~~-----------------~---~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~-~~ 313 (393)
T COG0436 256 IAALRK-LKSYLTS-----------------C---APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE-IG 313 (393)
T ss_pred HHHHHH-HHHhccc-----------------C---CCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 544331 1111110 1 12233333443332 245677778899999999999999 88
Q ss_pred CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCc---ccEEEEecccCCCCHH
Q psy12303 388 KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDL---PNFFRNIISSAAVTEG 464 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~---~~~~R~~~~~~~~t~~ 464 (480)
|+.+..+|..+.+.|...+...+ ..++...|.++..+++.++...+. .+++|+++. .+.+
T Consensus 314 g~~~~~~p~Ga~Y~~~~i~~~~d--------------~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~---~~~~ 376 (393)
T COG0436 314 GLSVVKPPEGAFYLFPKIPELLD--------------SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA---TSEE 376 (393)
T ss_pred CeeeccCCCeeEEEEeecCCCCC--------------HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe---cCHH
Confidence 89997668898888865554311 235667777776666666555543 379999943 4569
Q ss_pred HHHHHHHHHHHhhcc
Q psy12303 465 DIDFLLTEMDRLGHD 479 (480)
Q Consensus 465 di~~~~~~l~~~~~~ 479 (480)
++++.++++.+..+.
T Consensus 377 ~l~~a~~rl~~~~~~ 391 (393)
T COG0436 377 TLEEALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987754
No 54
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.95 E-value=5e-26 Score=235.28 Aligned_cols=384 Identities=13% Similarity=0.071 Sum_probs=257.6
Q ss_pred CCCCHHHHHHHHHhhccCCccCCC-CCcccc-----ccCCCChHHhHHHHHHHHcCcCCcch-hcChhhHHHHHHHHHHH
Q psy12303 49 KGLPLQKLIDDCFTTLKYQVRTGH-PMFMNQ-----LSCGLDVVSMAGEWLIATANTNMFTY-EIAPVFILMETVVLEKM 121 (480)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~~-p~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~e~~~~~~l 121 (480)
.+.+.-++++.++++-..+....+ ..|++- .+.....++...++ .+..++.. +.+.+..++-.++.+++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF----~t~hPyqp~e~sQG~lq~i~elq~~l 552 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEF----AQLHPFAPREQAEGYRAMIDELEAWL 552 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhh----hcCCCCCchhhhcCHHHHHHHHHHHH
Confidence 356888999999888776654332 233332 11111111111233 33344444 56788888888899999
Q ss_pred HHHhCCCCCCeEECC-ChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC
Q psy12303 122 RQIIGWQGGDSILAP-GGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS 200 (480)
Q Consensus 122 a~~~g~~~~~~~~t~-ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~ 200 (480)
++++|++. +.+.+ +|+.+++.++++.|.. ...+|. +++.+|+++...|.+....+...|+ +++.+|+
T Consensus 553 ~eLtGmd~--~Sl~p~sGA~gE~A~Lmair~y----h~~~Ge---~~r~~vLIp~saHgtNpasa~~~Gi---eVv~Vp~ 620 (954)
T PRK12566 553 CAITGFDA--ICMQPNSGAQGEYAGLLAIRRY----HRSRGQ---SQRDICLIPSSAHGTNPASAQMAGM---RVVIVEC 620 (954)
T ss_pred HHHHCCCe--EeecCCchHHHHHHHHHHHHHH----HHhcCC---CCCCEEEecccccccCHHHHHHCCC---EEEEecc
Confidence 99999987 46666 7778888888887753 122343 3345899999999887777888888 8999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc-cccCcccC
Q psy12303 201 DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK-KYRHPRLT 279 (480)
Q Consensus 201 ~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~~ 279 (480)
|++|.+|+++|++++++.. .++++|.++++++..+..+|+++|+++|+++|+++++|+|+..+....+ ....
T Consensus 621 D~~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~---- 693 (954)
T PRK12566 621 DPDGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADI---- 693 (954)
T ss_pred CCCCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhc----
Confidence 9999999999999997321 2389999999987776667899999999999999999999986555443 2344
Q ss_pred CCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccc-c-cCcccCCCCccccCCCC-CCchHHHHHH
Q psy12303 280 GIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK-L-YDVRYDTGDKVIQCGRH-NDIFKLWLQW 356 (480)
Q Consensus 280 ~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~~~~r~-~~~l~~~~~l 356 (480)
++|++++++|||+++|.|.|+.+++.-...... .+++.+... . .+.....+..+..|.-. ..++.+|..+
T Consensus 694 ---GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L----~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi 766 (954)
T PRK12566 694 ---GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHL----APFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYI 766 (954)
T ss_pred ---CCCEEEecCCcccCcCccCCCCccchhhhhhhh----hhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHH
Confidence 999999999999999999999888763322211 122221110 0 00000112111111111 1356788888
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC---CceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 357 RAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE---PEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 357 ~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~---~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
..+|.+ +.+.......+++|+.+.|.+ ..++.. .+ +....+.+...+.. ..+.+ ..++.++|
T Consensus 767 ~~lG~e-Lk~aa~~ailnAnYla~rL~~-~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~-----------~~dvakRL 832 (954)
T PRK12566 767 AMMGPQ-LADASEVAILSANYLANQLGG-AFPVLY-RGRNERVAHECILDLRPLKAQTGIS-----------EEDVAKRL 832 (954)
T ss_pred HHHCHH-HHHHHHHHHHHHHHHHHHhHh-hCCCCc-CCCCCCeeeEEEEEccccccccCCC-----------HHHHHHHH
Confidence 889998 887778788999999999988 555444 22 21233333322111 00110 24678888
Q ss_pred HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 433 MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|..... ..+.. .+.+|++ ++..++++|||+++++|+.+.++
T Consensus 833 ~d~Gihapt-~~fPv-~~~LmIe-pTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 833 MDYGFHAPT-MSFPV-PGTLMVE-PTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHCCcEEeE-Eeecc-CCEEEEE-eeeeCCHHHHHHHHHHHHHHHHH
Confidence 887754332 23444 6799999 99999999999999999988765
No 55
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=5.3e-25 Score=215.98 Aligned_cols=311 Identities=15% Similarity=0.211 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|.++ +.+++|+++++..++.+... ||+ .|+++...|++...+++..|.
T Consensus 53 ~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~~--------------~gd-~Vl~~~~~h~s~~~~~~~~g~--- 112 (370)
T TIGR02539 53 IHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALCK--------------EGD-WVVLDGLAHYTSYVAAERAGL--- 112 (370)
T ss_pred HHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhhC--------------CCC-EEEECCcccHHHHHHHHHcCC---
Confidence 3455677999999976 77899999999988887753 445 788888999999888888887
Q ss_pred CeEEeeCCC--CCCCCHHHHHHHHHHHHHC-CCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 194 NCVEVPSDK--RGRLIPSELERLVLERKAK-GDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 194 ~v~~v~~~~--~~~~d~~~L~~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.+|.+. ++.+|+++|++++++.... +..+++|+++++++++|.+.|+++|.++|+++|+++++|+||+.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~ 192 (370)
T TIGR02539 113 NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPV 192 (370)
T ss_pred EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCC
Confidence 888898863 5889999999999764321 2347899999999999999999999999999999999999999875433
Q ss_pred ccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~ 349 (480)
+.... ++|+++.++||+++++.++|+++.+ +..++.......+|...... .+..+.. ..+
T Consensus 193 ~~~~~-------~~di~v~s~sK~~~~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~ 253 (370)
T TIGR02539 193 SAKEI-------GADFIVGSGHKSMAASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVE-----------LLGCTSRGAPI 253 (370)
T ss_pred CHHHc-------CCCEEEeeCcccccCCCCEEEEEEC-HHHHhhhcccccCCccceee-----------eecccccccHH
Confidence 33223 6899999999999977778888865 45555444333333221100 0001111 122
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
..++.++... .+.+. ..++..++++++++.|++ .|++++. ++..+.+.+.. |. ... .... -......
T Consensus 254 ~~~~~al~~~-~~~l~-~~~~~~~~~~~l~~~L~~--~g~~~~~~~~s~t~~v~~~~-~~-~~~----~~~~-~~~~~~~ 322 (370)
T TIGR02539 254 VTMMASFPHV-VERVK-RWDEEVKKTRWFVAELED--IGFIQLGQKPKEHDLVKFET-PG-FHE----IAQK-HKRRGYF 322 (370)
T ss_pred HHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHh--CCcEEEccCCCcCceEEEEC-Cc-hhH----Hhhh-hccccHH
Confidence 3333333221 22222 234445667899999999 5888753 34444444432 21 100 0000 0001235
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
+.++|.++|+..+.+ +..+++|+++ + ..|++|++++++.|+++++++
T Consensus 323 ~~~~L~e~GI~~ir~----~~~~~iRis~-~-~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 323 LYEELKKRGIHGIRS----GQTKYFKLSV-Y-GLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred HHHHHHhCCCccccC----CcceEEEEEe-c-CCCHHHHHHHHHHHHHHHHhc
Confidence 778888898642332 2246999994 3 569999999999999987653
No 56
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=224.93 Aligned_cols=313 Identities=15% Similarity=0.138 Sum_probs=210.0
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEEC---CChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILA---PGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t---~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.......+|+..++.++++||+++++..++ +|||+||..++.+..+ ||+ .|+++...|.++.
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~--------------~gd-~Ii~~~~ehg~~l 138 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQ--------------PHD-RIMGLDLPSGGHL 138 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcC--------------CCC-EEEecccccCCcc
Confidence 334456788778999999999987666566 7999999998888743 445 8888999998876
Q ss_pred HHHHHcC-----CCC--CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 183 SCAAVCG-----LGT--DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 183 ~~~~~~g-----~~~--~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
..+..+. ... ..+..++++.+|.+|+++|++++++. +|++|+++ .+.+|...|+++|.++|+++|+
T Consensus 139 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~-----~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga 211 (452)
T PTZ00094 139 THGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAF-----RPKLIIAG--ASAYPRDIDYKRFREICDSVGA 211 (452)
T ss_pred cccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHh-----CCCEEEEe--CCCCCCccCHHHHHHHHHHcCC
Confidence 5543221 000 13445667777999999999999753 16666653 3569999999999999999999
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
++|||++|+.|.+..+.... . +.++|++++++|||+++|.| |++++++. .............+.
T Consensus 212 ~l~vDaaq~~G~i~~~~~~~-~---~~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~~~~p---------- 275 (452)
T PTZ00094 212 YLMADIAHTSGLVAAGVLPS-P---FPYADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIENKINEAVFP---------- 275 (452)
T ss_pred EEEEeccchhccccCCCCCC-C---CCCCcEEEcCCccCCCCCCc-eEEEEecc-cchHHHHhhccccCC----------
Confidence 99999999999987654333 1 22789999999999999997 77777654 222111100001100
Q ss_pred CCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-eeEEEEEeecCccCCCc
Q psy12303 336 TGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-MVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 336 ~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-~~~v~f~~~~~~~~~~~ 413 (480)
.++++-. ....++..+++.+...+++++.++..+++++|.+.|.+ .|+++..+.. ...+.+.+......
T Consensus 276 ----~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~--~g~~v~~~~~~~~~~~v~~~~~~~~--- 346 (452)
T PTZ00094 276 ----GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK--RGYDLVTGGTDNHLVLVDLRPFGIT--- 346 (452)
T ss_pred ----CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh--CCcEEecCCCCCceEeecCCcCCCC---
Confidence 0011111 23445566666664556778889999999999999998 4888875321 12222222111111
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-----cccEEEEecccCCCC----HHHHHHHHHHHHHhhc
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-----LPNFFRNIISSAAVT----EGDIDFLLTEMDRLGH 478 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-----~~~~~R~~~~~~~~t----~~di~~~~~~l~~~~~ 478 (480)
...+...|.+.|+ +++...... ..+.+|++ ++.++| ++||+++++.|.++++
T Consensus 347 -----------~~~~~~~L~~~gI-~vs~~~~p~~~~~~~~~~vRis-~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 347 -----------GSKMEKLLDAVNI-SVNKNTIPGDKSALNPSGVRLG-TPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred -----------HHHHHHHHHHCCc-EEecccCCCCCcCCCCCeEEEC-CHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 2345566656674 443211111 14689999 777776 9999999999998765
No 57
>PLN02721 threonine aldolase
Probab=99.94 E-value=2.4e-24 Score=210.93 Aligned_cols=302 Identities=13% Similarity=0.167 Sum_probs=196.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---HHHHcCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS---CAAVCGLG 191 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~---~~~~~g~~ 191 (480)
.++++.+++++|.+. ++++++||+++..++.+.... ||+ .|++++.+|+++.+ .+...|.
T Consensus 43 ~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~~~-------------~gd-~Vl~~~~~~~~~~~~~~~~~~~g~- 105 (353)
T PLN02721 43 LRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHCDV-------------RGS-EVILGDNSHIHLYENGGISTLGGV- 105 (353)
T ss_pred HHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHccC-------------CCC-eEEEcCccceehhcccchhhhcCc-
Confidence 345566888888865 788888999988787765432 445 78889999987776 4555666
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC-CccEEEEeccC-CCccccccC---hHHHHHHHHHcCcEEEeecccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKG-DIPFFVNCTSG-TTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~-~~~~~v~~~~~-~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
+++.+|.++++.+|++++++++++....+ .++++|+++++ ++++|.+.| +++|.++|+++|+++|+|++|..+
T Consensus 106 --~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~ 183 (353)
T PLN02721 106 --HPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFN 183 (353)
T ss_pred --eeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhc
Confidence 78889988889999999999997431111 24888988775 566888755 789999999999999999998654
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
........ .....+++|++++++||++++|. |++++.++++..........+ .. +..
T Consensus 184 ~~~~~~~~--~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~~~-~~------------------~~~ 240 (353)
T PLN02721 184 ASVALGVP--VHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRKAKRLRKTL-GG------------------GMR 240 (353)
T ss_pred chhhhCCC--HHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHhHHHHHHhc-CC------------------Cee
Confidence 32111111 11112368999999999998753 444555666554322111100 00 000
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE-ecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL-ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~-~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
........++.. .+...+.+++..++++++.+.|++ ++++++ +.++..+.+.++... .. +. ..
T Consensus 241 ~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~-----------~~ 304 (353)
T PLN02721 241 QVGVLAAAALVA--LQENVPKLEDDHKKAKLLAEGLNQ-IKGLRVNVAAVETNIVYFDITD-GS-RI-----------TA 304 (353)
T ss_pred hhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEecCCccceEEEEEccC-Cc-cc-----------cH
Confidence 001111112222 122233345556788999999999 788865 556666655554321 10 00 02
Q ss_pred HHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 426 PILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..+.++|.+.|+.+... + .+++|++ +++.++++||++++++|++++..|
T Consensus 305 ~~~~~~L~~~gi~v~~~----~-~~~lR~~-~~~~~~~~~i~~~~~~l~~~~~~~ 353 (353)
T PLN02721 305 EKLCKSLEEHGVLLMPG----N-SSRIRVV-THHQISDSDVQYTLSCFQQAALTL 353 (353)
T ss_pred HHHHHHHHhCCcEEecC----C-CceEEEE-ecCcCCHHHHHHHHHHHHHHhhcC
Confidence 46778888888554432 2 4699999 778899999999999999887653
No 58
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.94 E-value=1.2e-23 Score=193.09 Aligned_cols=327 Identities=13% Similarity=0.096 Sum_probs=238.8
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
.+.+...++...++|. -...++-.++.+|.++..++ ++..++|++|---++..++++... ||
T Consensus 44 ~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--------------~g 107 (388)
T COG1168 44 IEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--------------PG 107 (388)
T ss_pred HHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--------------CC
Confidence 3778888887777775 33356888999999999988 457899999999999999988765 66
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC-C--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---c
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD-K--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---D 241 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~-~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~ 241 (480)
+ .|++..+.|+.+.++...-|. +++..|.- + .+.||.++||+++.+.. ++++++|+|+||+|.+ +
T Consensus 108 d-~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Grvwt~e 178 (388)
T COG1168 108 D-GVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGRVWTKE 178 (388)
T ss_pred C-eeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCccccHH
Confidence 7 667777888889999998887 78888764 3 35779999999998752 6899999999999988 6
Q ss_pred ChHHHHHHHHHcCcEEEeeccccccccccccccCc--ccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC
Q psy12303 242 PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHP--RLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 242 ~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~ 318 (480)
.|.+|.+||++||+.++.|+.|+-..+....+-.. .-.....--+.+.++.|.++.+ ..|+.+++.++.+.......
T Consensus 179 eL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~ 258 (388)
T COG1168 179 ELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR 258 (388)
T ss_pred HHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH
Confidence 79999999999999999999999877654321110 1112223345677889999876 67899998888754332111
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
.. .... ...+++++-+...++ |..++.++.+...++.+++.+.+.+++|++++. .|+
T Consensus 259 l~-~~~~-------------------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~-~p~ 317 (388)
T COG1168 259 LK-RNGL-------------------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVT-EPQ 317 (388)
T ss_pred HH-HhcC-------------------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe-cCC
Confidence 10 0000 012444544444444 899999999999999999999999978999985 666
Q ss_pred eeEEEEE-eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCc--ccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 397 MVNVSFW-YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDL--PNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 397 ~~~v~f~-~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
+.-..|. +.+-.+. ..++.+.+.+++.+.+..+...|. .+++|+. ..++++-+++.+++|
T Consensus 318 gTYL~WLD~r~l~l~--------------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN---~acpr~~L~eal~ri 380 (388)
T COG1168 318 GTYLAWLDCRELGLD--------------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN---FACPRAILEEALERL 380 (388)
T ss_pred CceeeeeeccccCCC--------------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe---cCCCHHHHHHHHHHH
Confidence 6555443 2222211 135667777888888877655543 6899977 556788888889888
Q ss_pred HHhhcc
Q psy12303 474 DRLGHD 479 (480)
Q Consensus 474 ~~~~~~ 479 (480)
+..+++
T Consensus 381 ~~al~~ 386 (388)
T COG1168 381 KRALKK 386 (388)
T ss_pred HHHHhc
Confidence 877654
No 59
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=212.56 Aligned_cols=314 Identities=12% Similarity=0.030 Sum_probs=207.3
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEECC-ChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSILAP-GGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~-ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
++.+.++.+++++.+++++|+++ .+++|++ |||.++..++..... +++..++. ...|.+-...
T Consensus 43 ~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~--------------~~~~~vi~-~g~f~~~~~~ 107 (378)
T PRK03080 43 QKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLG--------------ARRVDHLA-WESFGSKWAT 107 (378)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCC--------------CCcceEEE-eCHHHHHHHH
Confidence 45667888899999999999954 5788775 899988888866532 11324444 4577764332
Q ss_pred --HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 185 --AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 185 --~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
++.+|+. +++.++.+.++.+|+++++ . ++.|++++.+|.+|.+.|+++|++ +++|++++||++
T Consensus 108 ~~~~~~g~~--~v~~~~~~~g~~~d~~~i~----~-------~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~ 172 (378)
T PRK03080 108 DVVKQLKLE--DPRVLEADYGSLPDLSAVD----F-------DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDAT 172 (378)
T ss_pred HHHhhcCCC--CceEeccCCCCCCCHhhcC----C-------CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecc
Confidence 2455652 5677777766778877633 1 346899999999999999999999 889999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcc-----cccccc--cccCcccC
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAE-----YLFMQD--KLYDVRYD 335 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~-----~l~~~~--~~~~~~~~ 335 (480)
++.+..+.+.. .+|++++++|||+++|.|+|+++++++ .+........+ |+.-.. ......++
T Consensus 173 qs~G~~pidv~---------~iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (378)
T PRK03080 173 SAAFALPLDWS---------KLDVYTFSWQKVLGGEGGHGMAILSPR-AVERLESYTPARPIPKFFRLTKGGKAIENSFK 242 (378)
T ss_pred cccccCCCCHH---------HCcEEEEehhhhCCCCCceEEEEECHH-HHHhhhcccCCCCCchhheeccchHHhhhhhc
Confidence 99999877753 369999999999999999999999865 33333222111 110000 00000111
Q ss_pred CCCccccCCCCC-CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-C--ce-eEEEEEeecCcc
Q psy12303 336 TGDKVIQCGRHN-DIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-P--EM-VNVSFWYLPTRV 409 (480)
Q Consensus 336 ~~~~~~~~~r~~-~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~--~~-~~v~f~~~~~~~ 409 (480)
.+.. .+-.. ...++..+++.+-.. |++++.+|..++++++++.|++ .++++++.+ + .. .+++|.. +...
T Consensus 243 ~~t~---~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s~~i~~~~~-~~~~ 317 (378)
T PRK03080 243 GQTI---NTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK-TPWATPLVADPATRSNTSVTLDF-VDAQ 317 (378)
T ss_pred CCcc---cCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccCccEEEEEc-CCch
Confidence 1111 01111 122335567777666 7899999999999999999999 777777642 2 12 3566643 2100
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+ . ..++..++.++|+++... ......+.+|+| ++.++|++||+++++.|++++++
T Consensus 318 ~~---------~---~~~~~~~l~~~~i~v~~g-~~~~~~~~vRis-~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 318 AA---------V---DAAAVAKLLRENGAVDIE-PYRDAPNGLRIW-CGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred HH---------H---HHHHHHHHHHcCCeeccc-cccCCCCcEEEe-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 00 0 123445565666443321 111114689999 89999999999999999987654
No 60
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.5e-23 Score=203.01 Aligned_cols=314 Identities=14% Similarity=0.106 Sum_probs=214.7
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+...+.+.+++++++.+|. ++ .++++|+|+++++..++.+..+ ||+ .|++..++|
T Consensus 72 ~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~--------------~Gd-~Vlv~~P~y 136 (405)
T PRK06207 72 QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVA--------------RGD-KVAIVQPDY 136 (405)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC--------------CCC-EEEEeCCCc
Confidence 45655566778999999999999995 44 7899999999999988887754 556 788888999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCC-----CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSD-----KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC 250 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~-----~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~ 250 (480)
+.+...++.+|. +++.++++ .++.+|+++|++++++. +++|++++|+||||.+.+ +++|.++|
T Consensus 137 ~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s~e~l~~l~~~a 207 (405)
T PRK06207 137 FANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAGVVYSAEEIAQIAALA 207 (405)
T ss_pred hhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999998 78888875 25789999999998765 789999999999999977 77888899
Q ss_pred HHcCcEEEeeccccccccccccccCc-ccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHP-RLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
++||+++++|++|+...+........ .+.....--+++.|++|.++ .+..+|+++. ++............+...
T Consensus 208 ~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~--- 283 (405)
T PRK06207 208 RRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDRMEKLQAIVSLR--- 283 (405)
T ss_pred HHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHHHHHHHHHhHhccC---
Confidence 99999999999999765422111110 01110112256779999998 4467999875 444444332211111000
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
...+...+....+ +...+++.+++..+.++.+.+.|++ ++++.+. +|..+.++|...+
T Consensus 284 ------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~-~p~gg~fl~~~l~ 343 (405)
T PRK06207 284 ------------------AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG-VEGVFVR-APQAGSYLFPRLP 343 (405)
T ss_pred ------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCceec-CCCeeEEEEEeCc
Confidence 0111122222222 3345677788888889999999988 7788764 5777777765443
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.. ..+ ..++.+.|. +.|+.+.....+.. ..+++|+++.. ++++++..+++|.+.+++
T Consensus 344 ~~--~~~-----------~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~---~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 344 RL--AVS-----------LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ---DHAAAVAAAERIAQLIER 402 (405)
T ss_pred cc--CCC-----------HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 21 000 134566675 45754443322221 15799999543 689999999999887654
No 61
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=1.1e-23 Score=209.14 Aligned_cols=303 Identities=18% Similarity=0.184 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
..+..++++.+++++|.+. +++++||++|+..++.+..+ ||+ .|+++..+|+++..++..++.
T Consensus 82 ~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~~~~~~~l~~--------------~gd-~vi~~~~~~~s~~~~~~~~~~ 144 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTED--TILYASCFDANGGLFETLLG--------------AED-AIISDALNHASIIDGVRLCKA 144 (393)
T ss_pred hHHHHHHHHHHHHHhCCCc--EEEECchHHHHHHHHHHhCC--------------CCC-EEEEeccccHHHHHHHHhcCC
Confidence 4455667788999999853 77778999999977766533 556 888899999999998888775
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
..+.++ .+|+++|++++++....+.++++|+.++.++++|.+.|+++|.++|++||+++++|++|+.+....
T Consensus 145 ---~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~ 216 (393)
T TIGR01822 145 ---KRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGP 216 (393)
T ss_pred ---ceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCC
Confidence 333333 369999999998754433458899999999999999999999999999999999999997665422
Q ss_pred ccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-C
Q psy12303 271 KKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-D 348 (480)
Q Consensus 271 ~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~ 348 (480)
.........++ .++|+++.++||+++++ ..|+++. ++...........++... ++... .
T Consensus 217 ~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~-~~~~~~~l~~~~~~~~~~-----------------~~~~~~~ 277 (393)
T TIGR01822 217 TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTA-RKEVVELLRQRSRPYLFS-----------------NSLPPAV 277 (393)
T ss_pred CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEe-CHHHHHHHHHhCccceec-----------------CCCCHHH
Confidence 11000011122 26899999999998754 5677664 455554433221222211 11111 1
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
..++..+++.+ +..+++.++..++++++.+.|++ .|+++. ++....+.+...+ . . ...++
T Consensus 278 ~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~~~~i~~~~-~------------~--~~~~l 337 (393)
T TIGR01822 278 VGASIKVLEML--EASNELRDRLWANTRYFRERMEA--AGFDIK-PADHPIIPVMLYD-A------------V--LAQRF 337 (393)
T ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH--cCCCCC-CCCCCEEEEEeCC-H------------H--HHHHH
Confidence 12233333332 23466778889999999999988 488764 3334444443211 1 0 02457
Q ss_pred HHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|.++|+.+ ...... .....+|++ ++..+|++||++++++|+++.++
T Consensus 338 ~~~L~~~gI~v-~~~~~~~~~~~~~~iRis-~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 338 ARRLLEEGIYV-TGFFYPVVPKGQARIRVQ-ISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred HHHHHHCCeeE-eeeCCCCCCCCCceEEEE-ECCCCCHHHHHHHHHHHHHHHHH
Confidence 78888888443 322111 113579999 88899999999999999988764
No 62
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.4e-23 Score=205.96 Aligned_cols=324 Identities=14% Similarity=0.120 Sum_probs=220.6
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+......|....+..++.+.+.+++.+.+| ++++++++|+|+++|+..++.+..+ |
T Consensus 42 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------------~ 107 (382)
T PRK06108 42 IRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVG--------------P 107 (382)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcC--------------C
Confidence 34555544433334466667778899999999999888 6778899999999999888877654 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
|+ .|+++.++|+.+...++.+|. +++.+|.+. ++.+|+++|++.+++. +++|++++++||||.+.+
T Consensus 108 gd-~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~~~~ 177 (382)
T PRK06108 108 GD-EVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWTASR 177 (382)
T ss_pred CC-EEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcccCH
Confidence 45 788888999999999998888 888899863 3579999999988654 889999999999998865
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC---CCCccceeCccccCCC-cccceEEEEeCchhhHhhh
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI---ERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~ 316 (480)
+++|.++|+++|+|+++|++|+.+...... ..+....+ ....+++.|++|.++. +.++|+++.. +..+....
T Consensus 178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~~~~~~~~ 255 (382)
T PRK06108 178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGG-RAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP-PALGQVLE 255 (382)
T ss_pred HHHHHHHHHHHHCCcEEEEehhhhhhccCCCC-CCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC-HHHHHHHH
Confidence 688999999999999999999987653111 11011111 1234677899998864 4678999874 44443322
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
... .+... + ...+...++...+ +.+.+++..++..++.+++.+.|++ .+++++. +
T Consensus 256 ~~~-~~~~~-----------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~ 312 (382)
T PRK06108 256 KLI-EYNTS-----------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA-LPGVEVA-K 312 (382)
T ss_pred HHH-Hhccc-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-CCCCccc-C
Confidence 110 11000 0 1122222222222 4556788888999999999999998 7888875 5
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
|+.++++|...+.... ..++.+.|.+ .|+.+.....+.. ..+++|+++. . ++++++..+++
T Consensus 313 p~~g~~~~~~l~~~~~--------------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~ 375 (382)
T PRK06108 313 PDGAMYAFFRIPGVTD--------------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA-R--DPARLDEAVER 375 (382)
T ss_pred CCeeEEEEEeCCCCCC--------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHH
Confidence 6667665543332211 2356666654 5654433222211 1579999944 3 89999999999
Q ss_pred HHHhhc
Q psy12303 473 MDRLGH 478 (480)
Q Consensus 473 l~~~~~ 478 (480)
|+++++
T Consensus 376 l~~~l~ 381 (382)
T PRK06108 376 LRRFLA 381 (382)
T ss_pred HHHHHh
Confidence 988764
No 63
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-23 Score=207.11 Aligned_cols=327 Identities=13% Similarity=0.144 Sum_probs=221.2
Q ss_pred hHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 88 MAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+.+...+......|...++..++++.+++++.+.+| ++++++++|+|+++|+..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------------- 115 (391)
T PRK08361 50 NIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLE-------------- 115 (391)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcC--------------
Confidence 344555554444334465556778888888888887776 4567899999999999988877643
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
||+ .|+++.++|.++...+...|. +++.+|+++ ++.+|++++++.+++. +++|++++++||||.+.|
T Consensus 116 ~g~-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~~~~ 185 (391)
T PRK08361 116 EGD-EVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKR------TRMIVINYPNNPTGATLDK 185 (391)
T ss_pred CCC-EEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcCcCH
Confidence 445 788889999999999998888 888999875 4579999999998765 789999999999999988
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS 319 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~ 319 (480)
+++|.++|+++++++++|++|+.+....... .+........++++.|++|.++.| ..+|++++. ++.+......
T Consensus 186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~-~~~~~~~~~~- 262 (391)
T PRK08361 186 EVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH-YPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP-EQVIKDMIKL- 262 (391)
T ss_pred HHHHHHHHHHHHcCeEEEEEcccccceeCCCCC-CCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC-HHHHHHHHHH-
Confidence 8889999999999999999998765422111 101111113467888999999854 458998874 4444432211
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cH--HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GD--EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~--~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
..+.... ...+...++...+ +. +.+++..++..+..+.+.+.|++ ++++++. .|
T Consensus 263 ~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~-~p 320 (391)
T PRK08361 263 HAYIIGN--------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE-MPHIKVF-EP 320 (391)
T ss_pred HhhhccC--------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCeec-CC
Confidence 1111000 1122222322222 21 34677778888889999999999 7888864 56
Q ss_pred ceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 396 ~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
+.+.++|.-.+. ... ..++.+.+.+ .|+.+.....+.. ..+++|+++. .++++++..++.
T Consensus 321 ~g~~~~~~~l~~~~~~--------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~ 383 (391)
T PRK08361 321 KGAFYVFANIDETGMS--------------SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA---TSKEKLIEAMER 383 (391)
T ss_pred CEEEEEEEECCCCCCC--------------HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHH
Confidence 767666543332 111 1345566654 5644433222221 1479999954 367899999999
Q ss_pred HHHhhccC
Q psy12303 473 MDRLGHDL 480 (480)
Q Consensus 473 l~~~~~~l 480 (480)
|++.++++
T Consensus 384 l~~~l~~~ 391 (391)
T PRK08361 384 MEKALEEL 391 (391)
T ss_pred HHHHHhcC
Confidence 99887654
No 64
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=209.72 Aligned_cols=293 Identities=15% Similarity=0.149 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++.+.+++++|.+. +++++||++||..++.++.. +|+ .|+++...|.++...+...|.
T Consensus 101 ~~~le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~~--------------~g~-~v~~~~~~h~s~~~~~~~~g~--- 160 (407)
T PRK07179 101 KPQFEKKLAAFTGFES--CLLCQSGWAANVGLLQTIAD--------------PNT-PVYIDFFAHMSLWEGVRAAGA--- 160 (407)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhCC--------------CCC-EEEEECCcCHHHHHHHHHCCC---
Confidence 3444567889899865 78999999999999987753 345 788899999999888888776
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++..++. .|+++|++++++. .+++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+.......
T Consensus 161 ~~~~~~~-----~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~ 230 (407)
T PRK07179 161 QAHPFRH-----NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGA 230 (407)
T ss_pred eEEEecC-----CCHHHHHHHHHhc-----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCC
Confidence 5544433 4999999999752 17889999999999999999999999999999999999998764321100
Q ss_pred cCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchH
Q psy12303 274 RHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFK 351 (480)
Q Consensus 274 ~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~ 351 (480)
......++ +.+|+++.|+||++++ +.|+++.+ ++..........++... ++-.. .+.+
T Consensus 231 g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~-~~~~~~~~~~~~~~~~~-----------------~t~~~~~~aa 290 (407)
T PRK07179 231 GLVAELGLTSRVHFITASLAKAFAG--RAGIITCP-RELAEYVPFVSYPAIFS-----------------STLLPHEIAG 290 (407)
T ss_pred chHHhcCCCCCCCEEEeechHhhhc--cCeEEEeC-HHHHHHHHHhCcCeeeC-----------------CCCCHHHHHH
Confidence 00001122 2579999999999985 37777764 44433322111111111 00001 1222
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
+.++++.+ +...+..++..+++++|.+.|.+ + |+++. ....++.+.+ +.. . -...+.+.
T Consensus 291 ~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~-~-g~~v~--~~~~i~~l~~-~~~------------~--~~~~~~~~ 349 (407)
T PRK07179 291 LEATLEVI--ESADDRRARLHANARFLREGLSE-L-GYNIR--SESQIIALET-GSE------------R--NTEVLRDA 349 (407)
T ss_pred HHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH-c-CCCCC--CCCCEEEEEe-CCH------------H--HHHHHHHH
Confidence 33344442 22355778899999999999999 5 87765 2334444432 110 0 02356677
Q ss_pred HHhcccEE---EeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQAGTMM---VGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~~g~~~---~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.++|+.. ..+....+ .+++|++ ++..+|++||++++++|++++++
T Consensus 350 L~~~GI~~~~~~~p~~~~~-~~~lRis-~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 350 LEERNVFGAVFCAPATPKN-RNLIRLS-LNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred HHHCCceEeeecCCCCCCC-CceEEEE-ECCCCCHHHHHHHHHHHHHHHHh
Confidence 88888542 11111112 4799999 88899999999999999988754
No 65
>PRK07324 transaminase; Validated
Probab=99.93 E-value=6.6e-23 Score=201.30 Aligned_cols=310 Identities=13% Similarity=0.099 Sum_probs=205.9
Q ss_pred cCcCCcchhcChhhHHHHHHHHHHHHHHh-CCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC
Q psy12303 97 ANTNMFTYEIAPVFILMETVVLEKMRQII-GWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD 175 (480)
Q Consensus 97 ~~~~~~~~~~~~~~~~~e~~~~~~la~~~-g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~ 175 (480)
+......|....+..++++. +++++ +.++.++++|+|+++|+..++.+..+ ||+ .|+++.
T Consensus 51 ~~~~~~~Y~~~~G~~~lr~~----ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~--------------~gd-~Vl~~~ 111 (373)
T PRK07324 51 LGQKKLTYGWIEGSPEFKEA----VASLYQNVKPENILQTNGATGANFLVLYALVE--------------PGD-HVISVY 111 (373)
T ss_pred HhcCCccCCCCCCCHHHHHH----HHHHhcCCChhhEEEcCChHHHHHHHHHHhCC--------------CCC-EEEEcC
Confidence 34334456555555555555 55555 36777899999999999999887754 556 788888
Q ss_pred CCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH
Q psy12303 176 QCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC 250 (480)
Q Consensus 176 ~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~ 250 (480)
++|.++...++..|. +++.+|++. ++.+|+++++++++++ +++|++++++||||.+.+ +++|+++|
T Consensus 112 P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a 182 (373)
T PRK07324 112 PTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIA 182 (373)
T ss_pred CCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999988 788999875 3568999998887654 889999999999999988 89999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
++||+++++|++|........ .. .+.....-.+.+.+++|.++. +..+|+++. ++..+........ +...
T Consensus 183 ~~~~~~ii~De~y~~l~~~~~-~~--s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~~-~~~~---- 253 (373)
T PRK07324 183 RSVDAYVLSDEVYRPLDEDGS-TP--SIADLYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYRD-YTMI---- 253 (373)
T ss_pred HHCCCEEEEEccccccccCCC-CC--ChhhccCCEEEEecchhhcCCccceeEEEec-CHHHHHHHHHHhC-cEEe----
Confidence 999999999999977543211 11 111111223556689999874 467899886 5555544332111 1000
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~ 407 (480)
+ ...+..+++...+. ...++...+...+..+.+.+.|.+ .+++.++ .|..+.+.|...+.
T Consensus 254 -------------~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~p~gg~~~~i~~~~ 315 (373)
T PRK07324 254 -------------C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAK-EPRVSYV-KPKAVSTSFVKLDV 315 (373)
T ss_pred -------------c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEE-CCCceEEEEEEeCC
Confidence 0 11222333333221 234455566667778888899988 7788765 56666655544432
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
... ..++.+++. +.|+. +.++...+..+++|+++. .+++.+++.+++|++++++
T Consensus 316 ~~~--------------~~~~~~~ll~~~gv~-v~pg~~F~~~~~iRis~~---~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 316 DMP--------------SEDFCLKLLKETGVL-LVPGNRFDLEGHVRIGYC---CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred CCC--------------HHHHHHHHHHhcCEE-EECccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 211 234566665 45644 444333333679999943 3689999999999887654
No 66
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=1.7e-23 Score=200.02 Aligned_cols=338 Identities=17% Similarity=0.158 Sum_probs=236.6
Q ss_pred ccCCCCCccccccCCCChHHhHHHHHHHH-cC--cCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHH
Q psy12303 68 VRTGHPMFMNQLSCGLDVVSMAGEWLIAT-AN--TNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLY 144 (480)
Q Consensus 68 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~ 144 (480)
+.+.+..|++....+....++. +.+..+ .. .........+...++|+ .+|+++|.+. .++.++|-.||..
T Consensus 42 ~nf~SNdYLGLa~~~~~~~a~~-~~~~~~g~g~~gsR~i~G~~~~h~~LE~----~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 42 LNFCSNDYLGLASHPELIEAAK-AAIRRYGVGAGGSRLISGTSDLHVELEE----ELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred EeeeccCcccccCCHHHHHHHH-HHHHHhCCCCCCcCcccCCcHHHHHHHH----HHHHHhCCCc--EEEEcccchhHHH
Confidence 3578888998876665333222 444432 11 11122233344445554 5999999986 7888889999999
Q ss_pred HHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCc
Q psy12303 145 AFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDI 224 (480)
Q Consensus 145 al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~ 224 (480)
++.+...+ +..|+..+..|.|+..+++..+. +++..+.+ |+++||+.+++....+.+
T Consensus 115 ~i~~l~~~---------------~dli~~D~lnHASiidG~rls~a---~~~~f~Hn-----D~~~Le~~l~~~~~~~~~ 171 (388)
T COG0156 115 LLSALLKK---------------GDLIFSDELNHASIIDGIRLSRA---EVRRFKHN-----DLDHLEALLEEARENGAR 171 (388)
T ss_pred HHHHhcCC---------------CcEEEEechhhhhHHHHHHhCCC---cEEEecCC-----CHHHHHHHHHhhhccCCC
Confidence 99888653 33899999999999999998887 77777775 999999999986533325
Q ss_pred cEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC--CCccceeCccccCCCcccce
Q psy12303 225 PFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE--RADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 225 ~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~~D~~~~s~hK~~~~p~~~g 302 (480)
.++|+.....++.|.+.||++|++++++|++|++||+||+.|.+--..-..-...|++ .+|+++.++.|.+++ .|
T Consensus 172 ~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G 248 (388)
T COG0156 172 RKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG 248 (388)
T ss_pred ceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC
Confidence 7899999999999999999999999999999999999999998732111110122332 458999999999995 67
Q ss_pred EEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI 382 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l 382 (480)
.++..+....+.......+|++.+... +..+.++..+++.+ +...++.++..++..++++.+
T Consensus 249 g~v~g~~~~~d~L~~~ar~~ifStalp----------------P~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~ 310 (388)
T COG0156 249 GYIAGSAALIDYLRNRARPFIFSTALP----------------PAVAAAALAALRIL--EEGPERRERLQELAAFFRSLL 310 (388)
T ss_pred ceeeCcHHHHHHHHHhCCceeccCCCC----------------HHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHH
Confidence 777788877776666667777664221 12333444555553 344677888999999999766
Q ss_pred hcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEE---EeeeeeCCcccEEEEecccC
Q psy12303 383 KSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMM---VGYQPLNDLPNFFRNIISSA 459 (480)
Q Consensus 383 ~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~---~~~~~~~~~~~~~R~~~~~~ 459 (480)
.. .++.+ .+....++.+..-++. ...++...|.++|+.. ..|++..+ ...+|++ ++.
T Consensus 311 ~~--~~~~~-~~s~s~I~pv~~gd~~---------------~a~~~s~~l~~~Gi~v~~i~~PTVp~g-tarlRi~-lta 370 (388)
T COG0156 311 KA--LGLVL-LPSESPIIPVILGDEE---------------RALEASRALLEEGIYVSAIRPPTVPKG-TARLRIT-LTA 370 (388)
T ss_pred Hh--cCCcc-CCCCCCeeeeEeCCHH---------------HHHHHHHHHHHCCeeEeeecCCCCCCC-cceEEEE-ecC
Confidence 66 57765 3444555544322111 1345677888887442 22344444 5799999 999
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy12303 460 AVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~~ 476 (480)
.+|++||+++++++.++
T Consensus 371 ~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 371 AHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCHHHHHHHHHHHHhh
Confidence 99999999999999875
No 67
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.8e-23 Score=202.20 Aligned_cols=327 Identities=13% Similarity=0.146 Sum_probs=217.8
Q ss_pred HHHHHHHHc-CcCCcchhcChhhHHHHHHHHHHHHHHhCCC---CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATA-NTNMFTYEIAPVFILMETVVLEKMRQIIGWQ---GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~-~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~---~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...+ +.....|....+...+.+.+++++++.+|.+ +.++++|+|+++++..++.+..+
T Consensus 45 ~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~------------- 111 (389)
T PRK05957 45 AIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITD------------- 111 (389)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcC-------------
Confidence 345554443 2333456555667788889999999999973 56799999999999888776643
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
||+ .|+++.+.|+.+...++..|+ +++.+|.++++.+|+++|+++++++ +++|++++++||||.+.+
T Consensus 112 -~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 112 -PGD-EIILNTPYYFNHEMAITMAGC---QPILVPTDDNYQLQPEAIEQAITPK------TRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred -CCC-EEEEeCCCCcCHHHHHHhcCC---EEEEeecCCCCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCcCcCHH
Confidence 556 788888888888777788887 8889999888899999999998754 889999999999999987
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCc-ccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHP-RLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS 319 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~ 319 (480)
+++|+++|+++|+++++|++|+...........+ .......-.+++.|+.|.++.| ..+|++++. +..++......
T Consensus 181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~ 259 (389)
T PRK05957 181 LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP-IHLLEAIKKIQ 259 (389)
T ss_pred HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC-HHHHHHHHHHH
Confidence 8889999999999999999998765421110000 1111112235567899999743 579999864 44444332211
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM 397 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~ 397 (480)
..+... ...+....+...+ +.+.+++..++..++++.+.+.|++ ++++..+.+|..
T Consensus 260 ~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~g 317 (389)
T PRK05957 260 DTILIC---------------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ-LQDRCTLHPANG 317 (389)
T ss_pred hhcccC---------------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-cCCCccccCCCe
Confidence 111000 1112233333333 3455677778888889999999998 777523356777
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCc--ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDL--PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+.+++...+...+ ..++.+.+.+ .|+. +.++...+. .+++|+++.. .++++++..+++|.
T Consensus 318 g~~~~~~~~~~~~--------------~~~~~~~l~~~~gv~-v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~~l~ 380 (389)
T PRK05957 318 AFYCFLKVNTDLN--------------DFELVKQLIREYRVA-VIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIERLV 380 (389)
T ss_pred eEEEEEeCCCCCC--------------hHHHHHHHHHHCCEE-EccchhhCCCCCCEEEEEEec--CCHHHHHHHHHHHH
Confidence 7766543332211 2356677764 5654 444332221 4699999533 36778888888887
Q ss_pred Hhhcc
Q psy12303 475 RLGHD 479 (480)
Q Consensus 475 ~~~~~ 479 (480)
+.+++
T Consensus 381 ~~~~~ 385 (389)
T PRK05957 381 QGLKT 385 (389)
T ss_pred HHHHh
Confidence 76654
No 68
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=4.9e-23 Score=201.37 Aligned_cols=300 Identities=16% Similarity=0.130 Sum_probs=200.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....+++++.+++++|.+. .+++++||+++..++.++.+ ||+ .|+++..+|+++..++...|
T Consensus 44 ~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~g 106 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLAG--------------KGD-LIISDSLNHASIIDGIRLSG 106 (349)
T ss_pred CchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhcC--------------CCC-EEEEehhhhHHHHHHHHHcC
Confidence 35566677888999999864 67778889999888776643 445 78899999999998888888
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
. +++.++. +|++.+++++++.. +..++++|++++++|++|...|+++|.++|+++|+++|+|++|+.+.+.
T Consensus 107 ~---~~~~~~~-----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~ 177 (349)
T cd06454 107 A---KKRIFKH-----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG 177 (349)
T ss_pred C---ceEEecC-----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC
Confidence 7 6666653 48889999987643 2234789999999999999999999999999999999999999865442
Q ss_pred cccccCc-ccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-C
Q psy12303 270 SKKYRHP-RLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-N 347 (480)
Q Consensus 270 ~~~~~~~-~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~ 347 (480)
......+ ......+.|+++.|+||+++. .+ |+++. ++............+... .+.. .
T Consensus 178 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 237 (349)
T cd06454 178 PHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAG-SKELIDYLRSYARGFIFS-----------------TSLPPA 237 (349)
T ss_pred CCCCChhhhccccccCcEEEeechhhhcc-cC-CEEEC-CHHHHHHHHHhchhhhcc-----------------CCCCHH
Confidence 1100000 111223679999999999985 33 65554 444444332222111110 0000 1
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
...++..+++.+.. +.+..++..++++++.+.|.+ . +++++.++....+++.. +.. . ...+
T Consensus 238 ~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~~~~~~~~~-~~~------------~--~~~~ 298 (349)
T cd06454 238 VAAAALAALEVLQG--GPERRERLQENVRYLRRGLKE-L-GFPVGGSPSHIIPPLIG-DDP------------A--KAVA 298 (349)
T ss_pred HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHh-c-CCcccCCCCCcEEEEeC-CCh------------H--HHHH
Confidence 22233344444321 466778889999999999998 4 77776554433333321 111 0 0246
Q ss_pred HHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 428 LKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.+.|.++|+.+... ... ...+++|++ ++..++++||++++++|+++
T Consensus 299 ~~~~L~~~gI~~~~~-~~~~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 299 FSDALLERGIYVQAI-RYPTVPRGTARLRIS-LSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHhCCceEEEe-cCCccCCCCCeEEEE-EeCCCCHHHHHHHHHHHHHh
Confidence 778888887554332 211 013699999 78889999999999999875
No 69
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.93 E-value=2.7e-23 Score=220.68 Aligned_cols=372 Identities=14% Similarity=0.079 Sum_probs=244.1
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhH-HHHHHH--H-cCcCCcchhcChh
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMA-GEWLIA--T-ANTNMFTYEIAPV 109 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~l~~--~-~~~~~~~~~~~~~ 109 (480)
-|.+++...+.++| ++.+..++++.++++...+.. ...|++...-+...|+++ ..++.. + ..-.++..+.+.+
T Consensus 42 iP~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~--~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG 118 (954)
T PRK05367 42 VPASIRLAEPLDLP-AALSEAEALAELRAIASKNKV--FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQG 118 (954)
T ss_pred CCHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC--CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHH
Confidence 35677655567787 477899999999988766543 223443322222333333 444432 1 1112344456777
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH---
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA--- 186 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~--- 186 (480)
.-+.-.+...++++++|++..++.++.++|.+...++++.+.. ++ .++ +|++++..|++...+++
T Consensus 119 ~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~-------~~----~~~-~vlv~~~~hP~~~~v~~t~a 186 (954)
T PRK05367 119 RLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVS-------KS----KSN-RFFVDDDVHPQTLDVLRTRA 186 (954)
T ss_pred HHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhc-------cC----CCC-EEEEcCccCHHHHHHHHHHH
Confidence 7777778899999999999999999999999888666554432 11 013 89999999999887654
Q ss_pred -HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 187 -VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 187 -~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
..|+ +++.+|.+.+ ++ .+ .+++++++.+ +.+|.+.|+++|+++|+++|++++||+.+..
T Consensus 187 ~~~G~---ev~~~~~~~d--~~--------~~------~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~A 246 (954)
T PRK05367 187 EPLGI---EVVVGDAAKA--LD--------HD------DVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLA 246 (954)
T ss_pred HhCCC---EEEEecCccC--CC--------cc------cEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhh
Confidence 3465 8888887542 11 11 2677777776 7899999999999999999999999997744
Q ss_pred cccccccccCcccCCCCCCccceeCcccc-----CCCcccceEEEEeCchhhHhhhcCCccccccccc-----------c
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKL-----MGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK-----------L 329 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~-----~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~ 329 (480)
..+..+...+ ++|+++.++||| +|+| +.|++++++. +.+.......++-...+. +
T Consensus 247 l~~l~~pge~-------GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~-~~r~lpgrivG~s~d~~g~~~~~lalqtRe 317 (954)
T PRK05367 247 LTLLTPPGEM-------GADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA-YKRSMPGRIVGVSVDAAGNPALRLALQTRE 317 (954)
T ss_pred ccCCCChhhc-------CCCEEEeeCcccCCCCCCCCC-CEEEEEECHH-HHhhCCCCeeeeecccCCCccccccccccc
Confidence 4443444455 999999999999 4444 5999999864 333321111111000000 0
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCcc
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
...+++.++.++.......++.+++.+..+|.+|++++.++...++.++++.|++ +|+++..++....+++.. +..
T Consensus 318 qhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~--~G~~~~~~~~f~~~~~~~-~~~- 393 (954)
T PRK05367 318 QHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA--LGLEVVHDSFFDTLTVEV-GGD- 393 (954)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh--cCcccCCCCCCCeEEEeC-CCC-
Confidence 0011111111110000001122333345679999999999999999999999987 799987666667777753 111
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..++.++|.+.|+.+ .. .. .+.+|+| ++..+|++||+.+++.+.
T Consensus 394 ---------------~~~i~~~l~~~gi~~-~~---~~-~~~l~is-~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 394 ---------------AAAVLARALAAGINL-RR---VD-DDHVGIS-LDETTTREDLAALLAVFG 437 (954)
T ss_pred ---------------HHHHHHHHHHCCcee-cc---cc-CCEEEEE-ecccCCHHHHHHHHHHHc
Confidence 246888998998544 21 11 3579999 999999999999999996
No 70
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=3.7e-23 Score=202.19 Aligned_cols=318 Identities=15% Similarity=0.150 Sum_probs=214.2
Q ss_pred HHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE
Q psy12303 95 ATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF 172 (480)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl 172 (480)
...+.+...|...+...++++.+.+++...+|. ...++++++|+|+++..++.++.. +|+ +|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------------~g~-~vl 87 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--------------PGD-EVL 87 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--------------CCC-EEE
Confidence 344455556666778889999989998888774 245799999999999988887743 335 799
Q ss_pred ecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCH--HHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH---
Q psy12303 173 TSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIP--SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA--- 247 (480)
Q Consensus 173 ~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~--~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~--- 247 (480)
++...|+++..+++..|. +++.++.++++.++. +.+++.+.+. +++|++++++|++|.+.|++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~v~i~~~~~~tG~~~~~~~l~~l~ 158 (350)
T cd00609 88 VPDPTYPGYEAAARLAGA---EVVPVPLDEEGGFLLDLELLEAAKTPK------TKLLYLNNPNNPTGAVLSEEELEELA 158 (350)
T ss_pred EcCCCchhHHHHHHHCCC---EEEEEecccccCCccCHHHHHhhcCcc------ceEEEEECCCCCCCcccCHHHHHHHH
Confidence 999999999999999987 889999988776665 5555544333 89999999999999999866555
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
++|+++|+++|+|+||+++.............+..+.|++..++||+++ .+.++|++++++..+......... +...
T Consensus 159 ~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~-~~~~- 236 (350)
T cd00609 159 ELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP-YTTS- 236 (350)
T ss_pred HHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH-hccc-
Confidence 8999999999999999987653222100011122257888999999998 556789988766455444321111 1000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
........++...++.. .+++++..++..++++++.+.|.+ .+...+ ..+..+.+.+...+
T Consensus 237 ----------------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~~~~~g~~~~~~~~ 297 (350)
T cd00609 237 ----------------GPSTLSQAAAAAALDDG-EEHLEELRERYRRRRDALLEALKE-LGPLVV-VKPSGGFFLWLDLP 297 (350)
T ss_pred ----------------CCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHh-cCCccc-cCCCccEEEEEecC
Confidence 00011223344444432 267888889999999999999999 655543 23444444442222
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC--CcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN--DLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~--~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.... ...+.+.+.+.|+.+....... + ..++|+++. .. ++||++++++|++
T Consensus 298 ~~~~--------------~~~~~~~l~~~gi~i~~~~~~~~~~-~~~iRi~~~-~~--~~~i~~~~~al~~ 350 (350)
T cd00609 298 EGDD--------------EEFLERLLLEAGVVVRPGSAFGEGG-EGFVRLSFA-TP--EEELEEALERLAE 350 (350)
T ss_pred CCCh--------------HHHHHHHHHhCCEEEecccccccCC-CCeEEEEee-CC--HHHHHHHHHHhhC
Confidence 2100 1234566666675544332222 3 579999944 43 9999999999864
No 71
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.93 E-value=4.3e-23 Score=202.50 Aligned_cols=337 Identities=17% Similarity=0.132 Sum_probs=207.6
Q ss_pred ccCCCCCccccccCCCChHHhHHHHHHHHcCcC------CcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHH
Q psy12303 68 VRTGHPMFMNQLSCGLDVVSMAGEWLIATANTN------MFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSIS 141 (480)
Q Consensus 68 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a 141 (480)
+.+.+..|+++...+...+.+. +.+..+..+. ........+...+.+++++.+++++|.+. .++.++|+.|
T Consensus 7 ~~~~s~~YL~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a 83 (370)
T PRK05937 7 IDFVTNDFLGFSRSDTLVHEVE-KRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMA 83 (370)
T ss_pred EEeECCCccCCCCCHHHHHHHH-HHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHH
Confidence 3577888999887766555554 4444443211 11111122245667778899999999965 4666667778
Q ss_pred HHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC
Q psy12303 142 NLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAK 221 (480)
Q Consensus 142 ~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~ 221 (480)
|...+..... +|+ .|+++..+|.|+..++..+.. ..+.++ ..|+++|++++++....
T Consensus 84 ~~~~~~~~~~--------------~~d-~ii~d~~~H~sv~~~~~~~~~---~~~~~~-----~~d~~~l~~~l~~~~~~ 140 (370)
T PRK05937 84 NLGLCAHLSS--------------VTD-YVLWDEQVHISVVYSLSVISG---WHQSFR-----HNDLDHLESLLESCRQR 140 (370)
T ss_pred HHHHHHHhCC--------------CCC-EEEEEhhhhHHHHHHHHHcCC---ceEEec-----CCCHHHHHHHHHhhhcc
Confidence 8643322211 224 788889999999999888642 223333 35899999999865433
Q ss_pred CCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccc
Q psy12303 222 GDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQC 301 (480)
Q Consensus 222 ~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~ 301 (480)
+..+.+|+++++++++|.+.|+++|.++|+++|+++|+|+||+.|.+..+........+..+.+.+..+++|.++ |.|.
T Consensus 141 ~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g-~~G~ 219 (370)
T PRK05937 141 SFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGA 219 (370)
T ss_pred CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh-cCce
Confidence 334677889999999999999999999999999999999999987664432111001122233455677889887 5677
Q ss_pred eEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q psy12303 302 STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKK 381 (480)
Q Consensus 302 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~ 381 (480)
|+++. ++..........++.+... .......++..++..+...+ ....++..++++++.+.
T Consensus 220 ~vl~~--~~~~~~~~~~~~~~~~s~~----------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~ 280 (370)
T PRK05937 220 ALLSS--SEVKQDLMLNSPPLRYSTG----------------LPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQK 280 (370)
T ss_pred EEEcC--HHHHHHHHHhCCCCeecCC----------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHh
Confidence 76654 2222222111122221110 00112333444454443333 34567788888888888
Q ss_pred HhcCC-CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCC
Q psy12303 382 IKSMP-DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAA 460 (480)
Q Consensus 382 l~~~~-~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~ 460 (480)
|.. . ++. ...+.+ +.. . ...+.+.|.++|+ ++....... .+++|++ ++.+
T Consensus 281 l~~-~~~~~---------~~~i~~-~~~-~--------------~~~~~~~L~~~gi-~v~~~~~~~-~~~iRis-~~~~ 331 (370)
T PRK05937 281 FSS-AAPGC---------VQPIFL-PGI-S--------------EQELYSKLVETGI-RVGVVCFPT-GPFLRVN-LHAF 331 (370)
T ss_pred cCC-CCCCC---------EEEEEe-CCh-h--------------HHHHHHHHHHCCe-eEEeeCCCC-CCEEEEE-cCCC
Confidence 765 2 111 111221 110 0 2356677778884 444322222 4689999 9999
Q ss_pred CCHHHHHHHHHHHHHhhcc
Q psy12303 461 VTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 461 ~t~~di~~~~~~l~~~~~~ 479 (480)
+|++||+++++.|++++++
T Consensus 332 ~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 332 NTEDEVDILVSVLATYLEK 350 (370)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
No 72
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=7.5e-24 Score=206.16 Aligned_cols=299 Identities=16% Similarity=0.177 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---HHHHcC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS---CAAVCG 189 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~---~~~~~g 189 (480)
..+++++++++++| +.++++++|||+|+..++.+... ||+ .|+++..+|+++.. .+...|
T Consensus 33 ~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~--------------~gd-~v~~~~~~~~~~~~~~~~~~~~g 95 (338)
T cd06502 33 TTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQ--------------PGG-SVICHETAHIYTDEAGAPEFLSG 95 (338)
T ss_pred HHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcC--------------CCC-eEEEecCcceeeecCCcHHHHcC
Confidence 34566778999999 44789999999999988887643 445 78888999988654 344567
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC-CCccEEEEeccCCCcccc--ccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAK-GDIPFFVNCTSGTTVLGA--FDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-~~~~~~v~~~~~~~~~G~--~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
+ +++.+|.+. +.+|+++|++++++..+. ..++++|++++++|+.|. .+++++|.++|+++|+++|+|+||..+
T Consensus 96 ~---~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~ 171 (338)
T cd06502 96 V---KLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLAN 171 (338)
T ss_pred c---eEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHH
Confidence 6 778888764 789999999999752111 124889999999887332 366888999999999999999998644
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
........ ......++|+++.++||+++.|. |++++.+++...........+. .+.+
T Consensus 172 ~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 228 (338)
T cd06502 172 AAAALGVA--LKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAG-------------------GGMR 228 (338)
T ss_pred HHHhcCCC--HHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhC-------------------CChh
Confidence 32111100 11111268899999999999764 4455556655544322111110 0001
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
...+.+++++..+...++.+.+++..++++++.+.|++ . ++.+ .++..++++++..... .....+ ..
T Consensus 229 ~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~-~~~~~~~~~v~~~~~~-------~~~~~l---~~ 295 (338)
T cd06502 229 QSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEE-L-GGLE-SEVQTNIVLLDPVEAN-------AVFVEL---SK 295 (338)
T ss_pred hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CCCc-ccccCCeEEEecCCcc-------HHHHHH---HH
Confidence 22334444555554445677778999999999999998 5 5544 3566666666432110 111111 11
Q ss_pred HHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 427 ILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
++.+. .+.|..+... + .+++|++ ++..+|++|++++++.+++
T Consensus 296 ~l~~~-~~~gi~~~~~----~-~~~lRi~-~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 296 EAIER-RGEGVLFYAW----G-EGGVRFV-THWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHh-hhCCEEEEec----C-CCeEEEE-eecCCCHHHHHHHHHHHhc
Confidence 22222 3567443222 2 2689999 8899999999999999875
No 73
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.7e-23 Score=202.34 Aligned_cols=330 Identities=14% Similarity=0.132 Sum_probs=220.3
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+......|....+...+++.+++++.+..|. +++++++|+|+++|+..++.++.. +
T Consensus 49 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~--------------~ 114 (393)
T PRK05764 49 IKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLD--------------P 114 (393)
T ss_pred HHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcC--------------C
Confidence 335555444333334655566678888888888777664 567899999999999888877643 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
|+ .|+++.+.|..+..+++..|. +++.+|.++ ++.+|++++++++++. +++|++++++||+|.+.+
T Consensus 115 gd-~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~ 184 (393)
T PRK05764 115 GD-EVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVYSPE 184 (393)
T ss_pred CC-EEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCcccCHH
Confidence 45 788999999999999999888 788898874 4678999999988654 789999999999999855
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccC--cccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH--PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~ 318 (480)
+++|.++|++||+|+++|++|+.+......... .........++++.+++|.++.| ..+|+++. +++..+.....
T Consensus 185 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~~~~ 263 (393)
T PRK05764 185 ELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIKAMSKL 263 (393)
T ss_pred HHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHHHHHHHH
Confidence 889999999999999999999876542111000 01122224567788999999844 45788874 45554433211
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
...+. .....+..+++.+.+ ..+.+.+..++..++++.+.+.|++ ++++.+. .|.
T Consensus 264 ~~~~~---------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~~~ 320 (393)
T PRK05764 264 QSHST---------------------SNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE-IPGLECP-KPE 320 (393)
T ss_pred Hhhcc---------------------cCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh-CCCCccc-CCC
Confidence 11100 002233444444444 2455667777888889999999999 7898875 466
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.+.+.|...+....... . ...++...+.+ .|+.+.+...+.. .+++|+++. .+++++++++++|.+
T Consensus 321 g~~~~~~~~~~~~~~~~-------~--~~~~~~~~l~~~~gi~v~~g~~f~~-~~~vRis~~---~~~~~~~~~i~~l~~ 387 (393)
T PRK05764 321 GAFYVFPNVSKLLGKSI-------T--DSLEFAEALLEEAGVAVVPGIAFGA-PGYVRLSYA---TSLEDLEEGLERIER 387 (393)
T ss_pred cceEEEEeccccccccc-------C--CHHHHHHHHHHhCCEEEccccccCC-CCEEEEEec---CCHHHHHHHHHHHHH
Confidence 65555433332211000 0 01345566654 5654443322322 579999954 379999999999998
Q ss_pred hhcc
Q psy12303 476 LGHD 479 (480)
Q Consensus 476 ~~~~ 479 (480)
++++
T Consensus 388 ~~~~ 391 (393)
T PRK05764 388 FLES 391 (393)
T ss_pred HHHh
Confidence 8764
No 74
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=1.3e-22 Score=204.49 Aligned_cols=347 Identities=15% Similarity=0.146 Sum_probs=216.7
Q ss_pred cCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHH
Q psy12303 69 RTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 69 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~ 148 (480)
++++.+|+++......+...+.+.+..+-.... ......+......++.+.+++++|.+. .++.++|+.+|..++.+
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~-~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~~i~a 180 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLKKYSASTC-SSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNSTIIPA 180 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHHHhCCCCC-ccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHH
Confidence 456788988875444444344455655422111 111111223455566777999999754 45556678888877766
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC-C----
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG-D---- 223 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~-~---- 223 (480)
... ||+ .|++++.+|.++..+++..|+ +++.++.+ |+++|++.+++....+ .
T Consensus 181 l~~--------------~Gd-~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~ 237 (489)
T PLN02483 181 LIG--------------KGG-LIISDSLNHNSIVNGARGSGA---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHR 237 (489)
T ss_pred hCC--------------CCC-EEEEcchhhHHHHHHHHHcCC---eEEEEeCC-----CHHHHHHHHHhhhhcccccccc
Confidence 543 556 899999999999999999988 78888865 6788888887543211 1
Q ss_pred --ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC--CCCccceeCccccCCCcc
Q psy12303 224 --IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI--ERADSVTWNPHKLMGTLL 299 (480)
Q Consensus 224 --~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~ 299 (480)
...+|+++...+++|.+.++++|.++|++||+++++|++|+.+.............++ .++|+++.+++|+++. .
T Consensus 238 p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~ 316 (489)
T PLN02483 238 PWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-C 316 (489)
T ss_pred CCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-C
Confidence 1236666677799999999999999999999999999999865431100000011121 2679999999999985 3
Q ss_pred cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh----cHHHHHHHHHHHHHHH
Q psy12303 300 QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK----GDEGFEKQIDRLMELA 375 (480)
Q Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~----g~~~~~~~~~~~~~l~ 375 (480)
| |+++ .+++.+.........+..... .....+..+..+++.+ +.+...+++++..+++
T Consensus 317 G-G~i~-~~~~li~~l~~~~~~~~~~~~----------------~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~ 378 (489)
T PLN02483 317 G-GYIA-GSKELIQYLKRTCPAHLYATS----------------MSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENS 378 (489)
T ss_pred c-eEEE-cCHHHHHHHHHhCccccccCC----------------cCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHH
Confidence 3 5554 556555554322222211100 0001111222334322 1223456678899999
Q ss_pred HHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC---CcccEE
Q psy12303 376 EYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN---DLPNFF 452 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---~~~~~~ 452 (480)
+++.+.|++ + |+++..+.....+.+... ... . ..++.+.|.++|+.++. ..+. .....+
T Consensus 379 ~~l~~~L~~-~-G~~v~~~~~sp~~~l~l~-~~~----------~----~~~~~~~Ll~~GI~v~~-~~fp~~p~~~~~v 440 (489)
T PLN02483 379 NFFRSELQK-M-GFEVLGDNDSPVMPIMLY-NPA----------K----IPAFSRECLKQNVAVVV-VGFPATPLLLARA 440 (489)
T ss_pred HHHHHHHHH-C-CCcccCCCCCCEEEEEEC-CHH----------H----HHHHHHHHHHCCcEEee-eCCCCCCCCCceE
Confidence 999999999 5 887764433333333221 110 0 13566778888866553 3321 113689
Q ss_pred EEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 453 RNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 453 R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|++ .+..+|++||++++++|+++++.
T Consensus 441 Ri~-isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 441 RIC-ISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred EEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 999 78889999999999999988654
No 75
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=2.3e-22 Score=199.77 Aligned_cols=325 Identities=12% Similarity=0.072 Sum_probs=220.6
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...+......|....+..++.+.+.+++.+..|. ++. ++++|+|+++|+..++.+..+
T Consensus 72 ~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~-------------- 137 (413)
T PLN00175 72 VKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLIN-------------- 137 (413)
T ss_pred HHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCC--------------
Confidence 335555444433345666667788999999999888885 444 699999999999888876643
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
||+ .|++.++.|+.+...++..|. +++.++.++ ++.+|+++|++++.+. +++|++++++||||.+.+
T Consensus 138 ~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~~s~~ 207 (413)
T PLN00175 138 PGD-EVILFAPFYDSYEATLSMAGA---KIKTVTLRPPDFAVPEDELKAAFTSK------TRAILINTPHNPTGKMFTRE 207 (413)
T ss_pred CCC-EEEEeCCCchhHHHHHHHcCC---EEEEEECCcccCCCCHHHHHHhcCcC------ceEEEecCCCCCCCcCCCHH
Confidence 556 788888999999999999988 888999874 5789999999998654 889999999999999965
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|++|++|+++|++|....+..+......+.+.....+++.|++|.++ .+..+|+++.. +..........
T Consensus 208 ~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~~~l~~~~- 285 (413)
T PLN00175 208 ELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAH- 285 (413)
T ss_pred HHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeC-HHHHHHHHHHH-
Confidence 778899999999999999999876542111100012222233467789999998 44688998864 44443322111
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
.+... + ...+..+++...+ +...+++..++..+.++.+.+.|++ . |+++. +|..+
T Consensus 286 ~~~~~-----------------~---~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~p~g~ 342 (413)
T PLN00175 286 SFLTF-----------------A---TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE-V-GFKVY-PSSGT 342 (413)
T ss_pred hhccC-----------------C---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeec-CCCee
Confidence 00000 0 1222233333333 3456778888888999999999999 4 78864 57777
Q ss_pred EEEEEeec-CccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC----CcccEEEEecccCCCCHHHHHHHHHH
Q psy12303 399 NVSFWYLP-TRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN----DLPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 399 ~v~f~~~~-~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~----~~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
.+.|.-.+ .... + ..++.+.|. +.|+.+.+...+. ...+++|+++. .+++++++.+++
T Consensus 343 ~f~~~~~~~~~~~--~-----------~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~---~~~e~l~~~~~r 406 (413)
T PLN00175 343 YFVMVDHTPFGFE--N-----------DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC---KDEETLRAAVER 406 (413)
T ss_pred EEEEEeccccCCC--C-----------HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc---CCHHHHHHHHHH
Confidence 66553321 1110 0 135566665 4575555433321 11469999954 379999999999
Q ss_pred HHHhhc
Q psy12303 473 MDRLGH 478 (480)
Q Consensus 473 l~~~~~ 478 (480)
|++.++
T Consensus 407 L~~~~~ 412 (413)
T PLN00175 407 MKTKLK 412 (413)
T ss_pred HHHHHh
Confidence 998765
No 76
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.92 E-value=9e-24 Score=205.70 Aligned_cols=336 Identities=13% Similarity=0.036 Sum_probs=214.0
Q ss_pred cccCCCChHHhHHHHHHHHc----CcCCcchhcC---hhhHHHHHHHHHHHHHHhCC-CCCCeEECCC-hhHHHHHHHHH
Q psy12303 78 QLSCGLDVVSMAGEWLIATA----NTNMFTYEIA---PVFILMETVVLEKMRQIIGW-QGGDSILAPG-GSISNLYAFLA 148 (480)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~---~~~~~~e~~~~~~la~~~g~-~~~~~~~t~g-gt~a~~~al~~ 148 (480)
+.++|...+..+.+.+...+ |.+...+..+ +-+.++.+++++.+++++|+ ++..++||+| +|+|+..++..
T Consensus 3 ~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 3 FSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 44555444333334444443 5555555544 55667888899999999998 4567999988 99999888877
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCC-C-HHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRL-I-PSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~-d-~~~L~~~i~~~~~~~~~~~ 226 (480)
.... + .+++ +|++....|.+ ...++..|+ +++.++.++++.. + ++..+..+++ .++
T Consensus 83 l~~~--------~---~~~~-~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~ 140 (355)
T cd00611 83 LLGD--------K---GTAD-YVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGKYTKIPDVETWDLAP------DAA 140 (355)
T ss_pred cCCC--------C---CeEE-EEECCHHHHHH-HHHHHhcCC---CcEEEecccccCCCCCCCHhhcCCCC------CCC
Confidence 6321 1 1323 56655444433 335566676 7788887655433 4 2222233333 388
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|++++.+|.+|... . ++++.||++++||++++.+..+.+..++ + ++..++||+++ |.|.|++++
T Consensus 141 lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~~idv~~~-------~--~~~ss~~K~lG-P~G~g~l~~ 205 (355)
T cd00611 141 YVHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSRPIDVSKF-------G--VIYAGAQKNLG-PAGVTVVIV 205 (355)
T ss_pred EEEEeCCcccccEEc--c---eecccCCCeEEEEccccccCCCCCHHHh-------C--EEEeecccccC-CCceEEEEE
Confidence 999999999999972 2 4556699999999999999998887655 3 34456999875 999999998
Q ss_pred eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcC
Q psy12303 307 KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSM 385 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~ 385 (480)
+++. +.......+.+. ...........+++.++ ....++..+++.+-.+ |++++.++.+++++++.+.|++
T Consensus 206 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~Tpn~-----~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~- 277 (355)
T cd00611 206 RKDL-LGKARKITPSML-NYKTHADNNSLYNTPPT-----FAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN- 277 (355)
T ss_pred CHHH-HhhcccCCCCcc-cHHHHHhcCCCCCCChH-----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-
Confidence 7653 333222222221 10000000000111111 2456777778877677 7999999999999999999999
Q ss_pred CCCeE-EecCC--ce-eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCC
Q psy12303 386 PDKFY-LILEP--EM-VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAV 461 (480)
Q Consensus 386 ~~g~~-~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~ 461 (480)
+||+. ...++ .. .+++|..... .+ ..++.+.+.+.|.+ ... .... .+.+|+| +.+++
T Consensus 278 ~~gl~~~~~~~~~rs~~vvsf~~~~~------------~l---~~~~~~~~~r~G~~-~~~-~~~~-~g~vR~S-~~~~n 338 (355)
T cd00611 278 SNGFYRGPVDKRARSRMNVPFRLGKE------------EL---EKEFLKEAEAAGMI-GLK-GHRS-VGGIRAS-IYNAL 338 (355)
T ss_pred CccccccCCCHHHcCceEEEEEcCCh------------hh---hHHHHHHHHHCCCc-ccC-CCcc-cCeEEEE-ccCCC
Confidence 88863 21111 23 3466643211 01 13444677788864 332 2222 3689999 78999
Q ss_pred CHHHHHHHHHHHHHhh
Q psy12303 462 TEGDIDFLLTEMDRLG 477 (480)
Q Consensus 462 t~~di~~~~~~l~~~~ 477 (480)
|++||++++++|+++.
T Consensus 339 t~edi~~l~~al~~~~ 354 (355)
T cd00611 339 SLEGVQALADFMKEFQ 354 (355)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999864
No 77
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=3.4e-23 Score=189.94 Aligned_cols=309 Identities=19% Similarity=0.230 Sum_probs=199.8
Q ss_pred cCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 99 TNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 99 ~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
.....|..++....+| +++++++|. ..++|++|||+||..+|.+... |+. .|++...+|
T Consensus 26 ~~~~~YG~D~~~~~~e----~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~--------------~~~-~vi~~~~aH 84 (342)
T COG2008 26 VGDDVYGEDPTTNALE----QRIAELFGK--EAALFVPSGTQANQLALAAHCQ--------------PGE-SVICHETAH 84 (342)
T ss_pred cCCCCCCCCHHHHHHH----HHHHHHhCC--ceEEEecCccHHHHHHHHHhcC--------------CCC-eEEEecccc
Confidence 3345666666655555 558899998 4699999999999999998875 545 888999999
Q ss_pred hhHHHH--HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHH-HCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 179 YSVRSC--AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERK-AKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 179 ~s~~~~--~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~-~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
.....+ ...++-+ ..+.+...++|.+++++++..|+++- ....+|.+++.+.. |..|++.| |++|.++||+
T Consensus 85 i~~~E~Ga~~~~~~~--~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~-te~GtVy~l~el~~i~~~~k~ 161 (342)
T COG2008 85 IYTDECGAPEFFGGG--QKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA-TEGGTVYPLDELEAISAVCKE 161 (342)
T ss_pred ceecccCcHHHHcCC--ceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc-CCCceecCHHHHHHHHHHHHH
Confidence 877653 3444422 22233334689999999999998632 22344555666555 58899977 5677888999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
+|+.||+|||--+..+...... ...-...+|++++++.|.++.| .|.+++.+.++...+......+- +
T Consensus 162 ~~l~LHmDGAR~~nA~valg~~--~~~~~~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a~~~rK~~G--g------ 229 (342)
T COG2008 162 HGLPLHMDGARLANALVALGVA--LKTIKSYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRARRWRKRAG--G------ 229 (342)
T ss_pred hCCceeechHHHHHHHHHcCCC--HHHHHhhCCEEEEecccCCcce--eeeEEEcCHHHHHHHHHHHHHhc--c------
Confidence 9999999997655444221100 1111128999999999999975 45666677776654321111110 0
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCC
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
+-|..+.+++ ..+-.+...-.....+|..++++.|.+.+.+ .||+++..+++.+++..+. +.
T Consensus 230 ----------l~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~-~~G~~~~~~~~tN~vf~~l-~~----- 291 (342)
T COG2008 230 ----------LMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEA-KPGVKLAFPVETNMVFVRL-PE----- 291 (342)
T ss_pred ----------cHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhh-cCCceeccCCcccEEEEEC-Ch-----
Confidence 0000111111 1112222333556667778889999999997 7999998777777665532 21
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcc-cEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLP-NFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~-~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
...+.+...|..+... .+.+.. ..+|++ +++.++++||+.++..+++++
T Consensus 292 --------------~~i~~l~~~~~~~~~~-~~~~~~~~~vRfv-ts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 292 --------------SAIEALRLAGALFYRG-VLIGAHGEIVRFV-TSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred --------------HHHHHHHhhchhheee-eeccCCCceEEEE-eeccCCHHHHHHHHHHHHHhh
Confidence 1124455555443331 222212 379999 999999999999999998864
No 78
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=1.7e-22 Score=197.72 Aligned_cols=301 Identities=14% Similarity=0.088 Sum_probs=198.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.+ .+++++|||+|+..++.++... ||+ .|+++..+|.+...++...|. ++
T Consensus 22 ~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~~-------------~gd-~vl~~~~~~~~~~~~~~~~g~---~~ 82 (352)
T cd00616 22 EFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGIG-------------PGD-EVIVPSFTFVATANAILLLGA---TP 82 (352)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCC-------------CCC-EEEeCCcchHHHHHHHHHcCC---eE
Confidence 4555688888875 4889999999999998776321 445 899999999999999998888 78
Q ss_pred EEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 196 VEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 196 ~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+.+++++ ++.+|+++|+++++++ +++|++++ ++|.+.|+++|.++|+++|+++++|++|+.+......
T Consensus 83 ~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~-- 151 (352)
T cd00616 83 VFVDIDPDTYNIDPELIEAAITPR------TKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR-- 151 (352)
T ss_pred EEEecCCCcCCcCHHHHHHhcCcC------CeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE--
Confidence 8999887 7899999999988654 78888765 5899999999999999999999999999977653321
Q ss_pred CcccCCCCCCccceeCc--cccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNP--HKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~--hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
.+ +. ..|+.++|+ +|++++| ..|++++++++.................. .+.... ...+.+...+.+
T Consensus 152 --~~-~~-~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~a 220 (352)
T cd00616 152 --KV-GT-FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRF----KYEHEI--LGYNYRLSEIQA 220 (352)
T ss_pred --Ec-cc-CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCC----ccccce--eeeccCcCHHHH
Confidence 01 11 246666665 5999643 34667766655544322111000000000 000111 111112233333
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-----eeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-----MVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-----~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
+..+. ..+++++..++.+++++++.+.|++ ++|++++.++. ...++|...+. .+.+ ..+
T Consensus 221 a~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~~~ 284 (352)
T cd00616 221 AIGLA--QLEKLDEIIARRREIAERYKELLAD-LPGIRLPDVPPGVKHSYHLYVIRLDPE--AGES-----------RDE 284 (352)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHhcC-CCCccCCCCCCCCceeeEEEEEEECCc--CCCC-----------HHH
Confidence 33333 3566788889999999999999999 89999875432 23444443210 0111 245
Q ss_pred HHHHHHhcccEEEe---eeeeC------------Cc-------ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 428 LKGRMMQAGTMMVG---YQPLN------------DL-------PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 428 i~~~l~~~g~~~~~---~~~~~------------~~-------~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+.+.|.+.|+.... +.... +. ...+|++ +++++|++||++++++|+
T Consensus 285 v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~-~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 285 LIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLP-LHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHHhC
Confidence 66777777753211 10000 00 2589999 999999999999999874
No 79
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=3.4e-22 Score=199.30 Aligned_cols=319 Identities=13% Similarity=0.064 Sum_probs=211.6
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
.|....+..++.+.+.+++....|. ++.++++|+|+|+|+.+++.+..+ ||+ .|+++.+.|+.
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~--------------~Gd-~Vlv~~P~y~~ 153 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQ--------------PGA-NILLPRPGYPL 153 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCCCcc
Confidence 4555556677777877777665554 567899999999999998887753 556 78899999999
Q ss_pred HHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCc
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNM 255 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~ 255 (480)
+...+...|. +++.+++. .++.+|+++|++.++++ ++++++++|+||||.+.+ +++|.++|+++|+
T Consensus 154 y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i 224 (430)
T PLN00145 154 YEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADEN------TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGI 224 (430)
T ss_pred HHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcC------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 8888888888 77777763 35789999999988765 889999999999999987 7888999999999
Q ss_pred EEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCch-hhHhh--hcCCccccccccccc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDG-LLISC--NQMSAEYLFMQDKLY 330 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~-~~~~~--~~~~~~~l~~~~~~~ 330 (480)
++++|++|+...+....... ..+... ..-+++.|++|.++.| ..+|+++..++. .+... ......+....
T Consensus 225 ~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~---- 299 (430)
T PLN00145 225 LVIADEVYDHLTFGSKPFVPMGVFGEV-APVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNIS---- 299 (430)
T ss_pred EEEEeccchhhccCCCCccchhhhccc-CcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhccc----
Confidence 99999999876542211110 001111 1235566899996555 789999875432 22110 00000000000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~ 407 (480)
. ....+...+....+ ..+.+++.++..++.++.+.+.|++ ++++.....|+.+++.|...+.
T Consensus 300 ------------~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~~P~ga~y~~v~l~~ 364 (430)
T PLN00145 300 ------------T--DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE-IKCITCPHKPEGSMFVMVKLDL 364 (430)
T ss_pred ------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcCCCeeeEEEeccCh
Confidence 0 01122222222222 2456788888889999999999999 8888765568888777654432
Q ss_pred c-cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 408 R-VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 408 ~-~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. ..+... ..++..++.++..+++.++...+..+++|+++. .+.++++..+++|.++++
T Consensus 365 ~~~~~~~~----------~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~---~~~~~l~~al~rl~~~~~ 423 (430)
T PLN00145 365 SCLSGIKD----------DMDFCCKLAKEESVVVLPGSALGMKNWLRITFA---IDPPSLEDGLERLKSFCL 423 (430)
T ss_pred hhcCCCCC----------HHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 1 001000 123445555443344444444444789999954 378999999999988764
No 80
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=7.9e-23 Score=215.99 Aligned_cols=359 Identities=14% Similarity=0.075 Sum_probs=238.7
Q ss_pred HHHHHHhcCCCCCC--CCCCHHHHHHHHHhhccCCccCCCCCccccccCCC----ChHHhHHHHHHHH---cCcCCcchh
Q psy12303 35 PAEMKAMLDLDIPE--KGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGL----DVVSMAGEWLIAT---ANTNMFTYE 105 (480)
Q Consensus 35 p~~~~~~~~~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~l~~~---~~~~~~~~~ 105 (480)
|..++. .+.++|+ ++.+..++++.++++...+.. |++|...+. .|+.++..++... ..-.++..+
T Consensus 68 P~~i~~-~~l~lp~~~~~~sE~e~~~~~~~la~kN~~-----~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaE 141 (993)
T PLN02414 68 PKSIRL-DSMKLSKYDEGLTESQMLEHMKSLASKNKV-----FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAE 141 (993)
T ss_pred CHHHhc-CCCCCCCCCCCCCHHHHHHHHHHHHhcCCc-----cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchH
Confidence 444522 2456672 477899999999888665432 444444444 4444444444321 111233334
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
.+++..+.-.+...++++++|++.+++.++.++|.+...++++.+.. .| + +.+|++++..|++...++
T Consensus 142 isQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~-------~g----~-~~~VlVs~~~hP~~~~v~ 209 (993)
T PLN02414 142 IAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL-------KG----K-KKKFLIASNCHPQTIDVC 209 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc-------cC----C-CCEEEEcCccCHhHHHHH
Confidence 55666676778899999999999999999999999888776655432 11 1 237999999999988777
Q ss_pred HHc----CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 186 AVC----GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 186 ~~~----g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
+.. |+ +++.+|.+.. + ...+. +..+++..+ +.+|.+.|+++|+++|+++|++++| +
T Consensus 210 ~t~a~~~Gi---eV~~v~~~~~---~------~~~~~------v~~vlvq~P-~~~G~v~dv~~I~~~ah~~GaL~iV-a 269 (993)
T PLN02414 210 QTRADGLGL---EVVVADEKDF---D------YSSGD------VCGVLVQYP-ATDGEVLDYAEFVKNAHANGVKVVM-A 269 (993)
T ss_pred HHhhhhcCC---EEEEecchhh---c------cccCc------eEEEEEecC-CCCeEEcCHHHHHHHHHHcCCEEEE-E
Confidence 554 44 7888876421 1 11112 556666566 6799999999999999999999999 8
Q ss_pred ccccccccc-ccccCcccCCCCCCccceeCccccC-----CCcccceEEEEeCchhhHhhhcCCcccccccccccC----
Q psy12303 262 AWGGGLLLS-KKYRHPRLTGIERADSVTWNPHKLM-----GTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD---- 331 (480)
Q Consensus 262 a~~~~~~~~-~~~~~~~~~~~~~~D~~~~s~hK~~-----~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---- 331 (480)
|+..+.... +...+ ++|+++.++|||+ ++|. .|++++++.. .+. .++.+.+......
T Consensus 270 ad~lal~~l~~pge~-------GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~-~r~----~PgriVG~s~d~~g~~~ 336 (993)
T PLN02414 270 TDLLALTMLKPPGEW-------GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY-KRL----MPGRIIGVSVDSSGKPA 336 (993)
T ss_pred ECHHHhcCCCCHhhc-------cCcEEEECCCccccCCCCCCCC-eeEEEECHHH-Hhh----CCCcccCcccCCCCCcc
Confidence 887776655 34445 9999999999998 4444 7999988753 222 2211111100000
Q ss_pred -----------cccCCCCccccCCCCCCchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 332 -----------VRYDTGDKVIQCGRHNDIFKLWLQW-----RAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 332 -----------~~~~~~~~~~~~~r~~~~l~~~~~l-----~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
.+++.++.++ ....++++.+ ..+|..|++++.++...++.++++.|.+ +|+++..++
T Consensus 337 ~~l~LqtReqhiRrEkaTsNi-----ct~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~--~G~~~~~~~ 409 (993)
T PLN02414 337 LRMAMQTREQHIRRDKATSNI-----CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK--LGFQVQSLP 409 (993)
T ss_pred cccccccccchhhhcccccch-----hHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh--cCCccCCCC
Confidence 0111111111 1122333333 3458899999999999999999999988 789988777
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.+..++|... . ..++.++|.++|+. +... . .+.+|+| ++..+|++|||.+++.|..
T Consensus 410 ~f~~vt~~~~--~----------------~~~v~~~L~~~gI~-l~~~--~--~~~lrvs-~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 410 FFDTVKVKCS--D----------------ADAIADAAAKVGIN-LRVV--D--ANTVTVS-FDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CcCeEEEecC--C----------------HHHHHHHHHHCCCe-eEEe--c--CCeEEEE-eeccCCHHHHHHHHHHHcc
Confidence 7888888641 1 24677888888853 2221 1 3579999 9999999999999999964
No 81
>PLN02187 rooty/superroot1
Probab=99.92 E-value=5.4e-22 Score=199.16 Aligned_cols=318 Identities=11% Similarity=0.051 Sum_probs=210.9
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
..|....+...+.+.+++++.+.+| ++++++++|+|+++|+..++.+..+ ||+ .|+++.++|+
T Consensus 102 ~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--------------pGd-~Vlv~~P~y~ 166 (462)
T PLN02187 102 NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLAR--------------PNA-NILLPRPGFP 166 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEEeCCCCc
Confidence 4455566667788888888877655 4678999999999999999887754 556 7888899999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcC
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYN 254 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~ 254 (480)
.+...+...|+ +++.++.. +++.+|+++|++++++. +++|++++|+||||.+.+ +++|.++|++||
T Consensus 167 ~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~ 237 (462)
T PLN02187 167 HYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSHDHLKKVAETARKLG 237 (462)
T ss_pred cHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCC
Confidence 99888998888 77888874 45889999999888654 789999999999999976 788999999999
Q ss_pred cEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCch-hh---HhhhcCCccccccccc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDG-LL---ISCNQMSAEYLFMQDK 328 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~-~~---~~~~~~~~~~l~~~~~ 328 (480)
+++++|++|+...+....+.. ..+... .--+++.|++|.++.| ..+|+++..++. .+ .........+-..
T Consensus 238 i~iI~DE~Y~~l~f~~~~~~s~~~~~~~-~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~--- 313 (462)
T PLN02187 238 IMVISDEVYDRTIFGDNPFVSMGKFASI-VPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVT--- 313 (462)
T ss_pred CEEEEeccccccccCCCCceeHHHhccC-CcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhcccc---
Confidence 999999999886542211100 011111 1124556899996655 789999875442 11 1111111111000
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
. ....+...+....+ ..+.+++..+...+.++.+.+.|++ ++++..+..|..++++|.-.
T Consensus 314 --------------~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~-~~~~~~~~~P~gg~fl~~~l 376 (462)
T PLN02187 314 --------------P--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD-IPCVVCPKKPESCTYLLTKL 376 (462)
T ss_pred --------------C--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCCCCCCEeEEEEeec
Confidence 0 01122222222222 3456788888888899999999999 76654344677777777533
Q ss_pred cCcc-CCCchhhHHHHhhhhhHHHH-HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 406 PTRV-RNMPHEKRLNILGEITPILK-GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 406 ~~~~-~~~~~~~~~~~l~~~~~~i~-~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+... .+... ..++. ..+.+.|+++.....+ +..+++|+++. +.++.++..+++|.++++
T Consensus 377 ~~~~~~~~~~----------~~~~~~~ll~~~gV~v~pG~~f-g~~~~iRis~~---~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 377 ELSLMDNIKD----------DIDFCVKLAREENLVFLPGDAL-GLKNWMRITIG---VEAHMLEDALERLKGFCT 437 (462)
T ss_pred ChhhCCCCCC----------HHHHHHHHHhhCCEEEECcccc-CCCCeEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 2110 11000 11233 3445677554443333 33689999954 358999999999988765
No 82
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.8e-22 Score=196.38 Aligned_cols=313 Identities=13% Similarity=0.030 Sum_probs=215.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCC---CC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQ---GG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~---~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
.+...+.+.+++++.+.+|.+ +. ++++|+|+++++..++.+..+ ||+ .|+++.++|+.+..
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~--------------~gd-~Vlv~~P~y~~~~~ 145 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFIN--------------PGD-VTLMTVPGYPVTGT 145 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCC--------------CCC-EEEEeCCCCccHHH
Confidence 566788888888888877743 44 799999999999888876654 556 78888899999999
Q ss_pred HHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEE
Q psy12303 184 CAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLH 258 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~ 258 (480)
.++..|. +++.+|.++ ++.+|++++++++.+. +++|++++|+||||.+.+ +++|.++|++||++|+
T Consensus 146 ~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI 216 (410)
T PRK06290 146 HTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVV 216 (410)
T ss_pred HHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 9999988 889999875 3678999999888654 889999999999999987 6788888999999999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
+|++|+...........-.+.+....++++.|++|.++. +..+|+++. ++..+.........+...
T Consensus 217 ~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~------------ 283 (410)
T PRK06290 217 QDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDSG------------ 283 (410)
T ss_pred EecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccccC------------
Confidence 999999765321110000111222456888899999964 467898885 444444332111111100
Q ss_pred CccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccC-CCchh
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVR-NMPHE 415 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~-~~~~~ 415 (480)
...+...++...+. .+.+++..++..+.++++.+.|++ . |+.+. +|+.+.+.|...|.... +...
T Consensus 284 ---------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~p~g~f~l~v~lp~~~~~~~~~- 350 (410)
T PRK06290 284 ---------QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE-V-GFKAE-MPGGTFYLYVKAPKGTKSGIKF- 350 (410)
T ss_pred ---------CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh-C-CCeec-CCCeeeEEEEECCCccccCCCC-
Confidence 01112222222221 234566777788889999999999 4 88764 57777666644443211 0000
Q ss_pred hHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 416 KRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 416 ~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. -..++.++|.++|.+++.+.... .+++|++++.+..++++.++++++|++.+.+
T Consensus 351 -----~--~~~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 351 -----E--NAEEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred -----C--CHHHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 0 02457788888886665442222 3699999888888999999999999987653
No 83
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=3.5e-22 Score=201.45 Aligned_cols=322 Identities=12% Similarity=0.124 Sum_probs=213.4
Q ss_pred hhcChhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
|....+..++.+++++++.+.+| ++++++++|+|+++|+..++.+..+ ||+ .|+++.++|+
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~--------------pGD-~Vlv~~P~Y~ 154 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD--------------PGD-VFLIPSPYYA 154 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC--------------CCC-EEEECCCCcc
Confidence 44445567788888899988877 6778999999999999999988765 666 8999999999
Q ss_pred hHHHHHHH-cCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 180 SVRSCAAV-CGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 180 s~~~~~~~-~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
.+...+.. .|+ +++.||++ +++.+|+++++++++...+.+.++++|++++|+||||.+.+ +++|.++|++|
T Consensus 155 ~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~ 231 (496)
T PLN02376 155 AFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK 231 (496)
T ss_pred chHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 99887774 687 88999985 35789999999888665544566899999999999999977 67788889999
Q ss_pred CcEEEeeccccccccccccccC--cccCC--CC--CCc--cceeCccccCC-CcccceEEEEeCchhhHhhhcCCccccc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRH--PRLTG--IE--RAD--SVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~--~~~~~--~~--~~D--~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
++++++|++|+...+..+.+.. ..... .. ..+ .++.|++|.++ .+..+|+++..+........... .+.
T Consensus 232 ~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-~~~- 309 (496)
T PLN02376 232 NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-SFG- 309 (496)
T ss_pred CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-hcC-
Confidence 9999999999986543221111 01110 00 112 24679999997 44889999976554443321111 110
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD-----EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN 399 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-----~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~ 399 (480)
. ...+...+....+.. +.+.+..++..+..+.+.+.|.+ .|++++ +|..+.
T Consensus 310 ~---------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~--~gi~~~-~~~aG~ 365 (496)
T PLN02376 310 L---------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK--ADIACL-TSNAGL 365 (496)
T ss_pred C---------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCccc-CCCceE
Confidence 0 112233333333322 22334456667777888888888 477764 577777
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
++|...+...... ..+.. ..++.+.+.++..+.+.++...+ ..+++|++|.+ .++++++..+++|++++
T Consensus 366 flwi~l~~~~~~~--~~~~~-----e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 366 FAWMDLRHLLRDR--NSFES-----EIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFV 436 (496)
T ss_pred EEEEEchhhhccC--CchhH-----HHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHH
Confidence 7775544322110 00000 13466767665334455433322 25799999653 35799999999998876
Q ss_pred c
Q psy12303 478 H 478 (480)
Q Consensus 478 ~ 478 (480)
+
T Consensus 437 ~ 437 (496)
T PLN02376 437 S 437 (496)
T ss_pred H
Confidence 3
No 84
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.92 E-value=9e-23 Score=177.34 Aligned_cols=310 Identities=16% Similarity=0.236 Sum_probs=224.4
Q ss_pred HHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeE
Q psy12303 117 VLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCV 196 (480)
Q Consensus 117 ~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~ 196 (480)
..+.+++++|++. +-+|.|+-+|-+.+|.+.+. +|+ .|+++..+||+..-+++..|+ +|.
T Consensus 66 F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~~--------------~gd-~vV~D~~aHYttyvAAEragl---~v~ 125 (382)
T COG1103 66 FLEDLAEFLGMDE--VRVTAGAREAKFAVMHALCK--------------EGD-WVVVDSLAHYTTYVAAERAGL---NVA 125 (382)
T ss_pred HHHHHHHHhCCce--eeecccchhhHHHHHHHhcc--------------CCC-EEEEcCcchHHHHHHHHhcCC---eEE
Confidence 3455999999987 89999999999999988876 345 899999999999999999999 889
Q ss_pred EeeCC--CCCCCCHHHHHHHHHHHHHCC-CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 197 EVPSD--KRGRLIPSELERLVLERKAKG-DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 197 ~v~~~--~~~~~d~~~L~~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
.||.. +++.++++...+.|++.++++ ..|.+.++|++....|.+.|.+.++++|+++|+++++.+||..+.++....
T Consensus 126 eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~k 205 (382)
T COG1103 126 EVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGK 205 (382)
T ss_pred ecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccc
Confidence 99964 368999999999999987764 779999999999999999999999999999999999999999999877765
Q ss_pred cCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~ 352 (480)
.. ++|+++.|+||.+.+..++|++-++.+ +.......+..+....+.+ -+.|+.+. ..+.+
T Consensus 206 e~-------g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KEve----------llGCT~rGapivTl 267 (382)
T COG1103 206 EI-------GADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKEVE----------LLGCTVRGAPIVTL 267 (382)
T ss_pred cc-------CCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhcccccccceee----------eecccccCchHHHH
Confidence 55 999999999999999899999998654 3333332221222111111 13355443 33344
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
.+++-.. .+. -.+.+.-.+.+++|.+.|++ +-|+..++. |...-..+ |..+.+. +..+.-..-.--+++.
T Consensus 268 mASfP~V-~eR-VkrWdeEv~kaR~fv~elEk-igg~~qlG~rPk~HdLm~-Fetp~f~-----eIakk~~r~gyFlY~E 338 (382)
T COG1103 268 MASFPHV-VER-VKRWDEEVEKARWFVAELEK-IGGVKQLGERPKNHDLMK-FETPVFH-----EIAKKHKRKGYFLYEE 338 (382)
T ss_pred HhcCHHH-HHH-HHHHHHHHHHHHHHHHHHHH-hhhHHHhCCCCcccceee-ecCchHH-----HHHHhCcCCceeeHHH
Confidence 4443331 222 34445667789999999999 877887763 43333332 2211110 1100000001135677
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.++|+.-+.+ |...++.+|+ +..+.|+++++++++++++++
T Consensus 339 LK~RgI~GI~~----G~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 339 LKKRGIHGIQP----GQTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHhcCcccccc----CceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 88888654444 3356889883 677999999999999999875
No 85
>PRK07682 hypothetical protein; Validated
Probab=99.92 E-value=3.5e-22 Score=197.10 Aligned_cols=312 Identities=12% Similarity=0.111 Sum_probs=214.6
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|...++...+.+++.+++.+.+|. ++ .++++|+|+++|+..++.+..+ ||+ .|+++.++|
T Consensus 51 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~gd-~vl~~~p~y 115 (378)
T PRK07682 51 TSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIIN--------------PGD-EVLIVEPSF 115 (378)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC--------------CCC-EEEEeCCCc
Confidence 44655677788999999999888776 34 3799999999999988877654 556 788889999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
+.+...++..|. +++.++.+. ++.+|+++|++++.+. +++|++++|+||||.+.+ +++|.++|++|
T Consensus 116 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~ 186 (378)
T PRK07682 116 VSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKSELEEIAVIVEKH 186 (378)
T ss_pred hhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHc
Confidence 999888888887 677888753 5789999999988764 889999999999999865 88999999999
Q ss_pred CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
++++++|++|+.+....+......+.+...-.+++.|++|.++. +..+|+++.. ++.++...... .+..
T Consensus 187 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~i~~l~~~~-~~~~-------- 256 (378)
T PRK07682 187 DLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP-VYFSEAMLKIH-QYSM-------- 256 (378)
T ss_pred CcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC-HHHHHHHHHHH-Hhhc--------
Confidence 99999999999776422110000122222345778899999984 4678998864 44444332111 0100
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC-cc
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT-RV 409 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~-~~ 409 (480)
+ ....+...++...+ +...+++..++..+.++++.+.|++ . ++++ ..|..+.+.|...+. ..
T Consensus 257 ------~------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~-~~p~g~~~~~~~~~~~~~ 321 (378)
T PRK07682 257 ------M------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE-I-GLTC-HVPGGAFYAFPSISSTGL 321 (378)
T ss_pred ------c------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc-CCCCeeEEEEEeccCCCC
Confidence 0 01222333333333 4455677788888999999999999 4 7775 457777666643321 11
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ..++.+.+. +.|+.+.....+.. ..+++|+++. ++++++++.+++|++++++
T Consensus 322 ~--------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 322 S--------------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA---TSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred C--------------HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHhh
Confidence 1 134566655 56754443222211 1579999954 3689999999999998765
No 86
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=8.6e-22 Score=192.11 Aligned_cols=288 Identities=12% Similarity=0.109 Sum_probs=201.1
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.++++++.++.++++|+|+++++..++.+..+ ||+ .|+++.++++.+...++..|. +
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~--------------~gd-~Vlv~~p~y~~~~~~~~~~g~---~ 123 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFIN--------------KGD-VVIYPHPSFAMYSVYSKIAGA---V 123 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcC--------------CCC-EEEEeCCChHHHHHHHHHcCC---e
Confidence 3566778888899888999999999998888877643 556 788888888888888888888 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
++.++.++++.+|++++++++++. ++++|++++++||||.+.+.+++.++|++++.++++|++|+... +...
T Consensus 124 ~~~v~~~~~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~---~~~~ 195 (351)
T PRK14807 124 EIPVKLKEDYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY---GNTI 195 (351)
T ss_pred EEEeecCCCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc---ccch
Confidence 889998888899999999998752 28899999999999999999999999999899999999997542 1111
Q ss_pred CcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW 353 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~ 353 (480)
.+..... .-.+++.|++|.++ .+..+|+++. +++...........+. ...+...
T Consensus 196 ~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~~~~-----------------------~~~~~q~ 250 (351)
T PRK14807 196 VDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKSPYN-----------------------INSLSQV 250 (351)
T ss_pred HHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHHHHHHHHccCCCC-----------------------cCHHHHH
Confidence 0011111 22466779999997 5578899885 4555444332111110 1122333
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH
Q psy12303 354 LQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM 433 (480)
Q Consensus 354 ~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~ 433 (480)
+....+....+++.+++..+.++.+.+.|++ .+|+.+. ++... +.+...+ . ..++.+.|.
T Consensus 251 ~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~-~~g~~~~-~~~~~-~~~i~~~-~----------------~~~~~~~l~ 310 (351)
T PRK14807 251 IALKVLRTGVLKERVNYILNERERLIKELSK-IPGIKVY-PSKTN-FILVKFK-D----------------ADYVYQGLL 310 (351)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEC-cCCcc-EEEEEcC-C----------------HHHHHHHHH
Confidence 3333333345677777788888889999988 7898863 45444 3332111 1 135667788
Q ss_pred hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 434 QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.|+.+.......+..+++|+++. +.++.+++++.|++++
T Consensus 311 ~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 311 ERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKELL 350 (351)
T ss_pred HCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHhh
Confidence 888654433221222579999954 5788999999998753
No 87
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.91 E-value=1.9e-22 Score=200.94 Aligned_cols=309 Identities=17% Similarity=0.147 Sum_probs=194.9
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH-
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC- 184 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~- 184 (480)
..+....+++..++++++++|.+...+ +++|||+|+..++.+..+ ||+ .|+++..+|+++...
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~a~~~~l~~l~~--------------~Gd-~Vl~~~~~~~~~~~~~ 122 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANV-QPHSGSQANLAVYFALLE--------------PGD-TIMGLDLSHGGHLTHG 122 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceee-ecCCcHHHHHHHHHHhcC--------------CCC-EEEEecCccCcccccc
Confidence 445566788778889999999976444 444688999988887753 556 788888888765433
Q ss_pred ----HHHcCCCCCCeEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE
Q psy12303 185 ----AAVCGLGTDNCVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL 257 (480)
Q Consensus 185 ----~~~~g~~~~~v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l 257 (480)
+...|. ++..++.+. ++.+|++++++++.+. ++++|+++++++ |...|+++|.++|++||+++
T Consensus 123 ~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~~l 192 (402)
T cd00378 123 SFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGASAY--PRPIDFKRFREIADEVGAYL 192 (402)
T ss_pred ccccccccce---eEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecCccc--CCCcCHHHHHHHHHhcCCEE
Confidence 344454 555555532 5899999999998642 277888877654 67779999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|..+......... .+. ++|+++.|+||++.+|. .|++++.++...........++....
T Consensus 193 i~D~a~~~g~~~~g~~~~-~~~---~~dv~~~s~sK~l~G~~-gg~i~~~~~~~~~~l~~~~~~~~~~~----------- 256 (402)
T cd00378 193 LVDMAHVAGLVAGGVFPN-PLP---GADVVTTTTHKTLRGPR-GGLILTRKGELAKKINSAVFPGLQGG----------- 256 (402)
T ss_pred EEEccchhhhhhcccCCC-ccc---CCcEEEeccccCCCCCC-ceEEEeccHHHHHHHHHHhCccccCC-----------
Confidence 999998655443221111 122 56899999999996654 46666665455444322211111110
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhH
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKR 417 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 417 (480)
.......++..++..+...++.+..++..++++++.+.|.+ . |++++..|..+.+++...+.. +.+
T Consensus 257 ------~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~v~v~~~~~--~~~---- 322 (402)
T cd00378 257 ------PHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE-R-GFKVVSGGTDNHLVLVDLRPK--GIT---- 322 (402)
T ss_pred ------chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEeecCCCCeEEEEeCCcc--CCC----
Confidence 00011112222333322235677888899999999999999 5 888764444444444333211 000
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEe---eeee--CCcccEEEEecccC----CCCHHHHHHHHHHHHHhhc
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVG---YQPL--NDLPNFFRNIISSA----AVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~---~~~~--~~~~~~~R~~~~~~----~~t~~di~~~~~~l~~~~~ 478 (480)
...+.+.|.+.|+.+.. +... ......+|++ .+. ..+++||+++++.|+++++
T Consensus 323 -------~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~-~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 323 -------GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIG-TPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred -------HHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEec-CHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 12344556667754422 1111 1014689998 444 4579999999999998764
No 88
>KOG1368|consensus
Probab=99.91 E-value=6.1e-23 Score=180.80 Aligned_cols=306 Identities=15% Similarity=0.195 Sum_probs=215.8
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
...|...|-...+|++ +|+++|-+. +.|+++||++|+.+++.-+.+ ||. .|++.+.+|..
T Consensus 49 DdVyGeD~tt~rLE~~----vA~l~GKEA--gLFv~SGTmgNllaIm~Hc~~-------------rg~-eii~gd~~HI~ 108 (384)
T KOG1368|consen 49 DDVYGEDPTTNRLEQR----VAELFGKEA--GLFVPSGTMGNLLAIMVHCHQ-------------RGS-EIIVGDRAHIH 108 (384)
T ss_pred cccccCCccHHHHHHH----HHHHhCccc--eeeecccccccHHHHHHHhcC-------------CCc-eEEeccchhee
Confidence 4567778888888888 788888766 999999999999999999875 434 89999999987
Q ss_pred HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHH--HCCCccEEEEeccCCCccc-cccCh---HHHHHHHHHcC
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERK--AKGDIPFFVNCTSGTTVLG-AFDPI---EEIADICQKYN 254 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~--~~~~~~~~v~~~~~~~~~G-~~~~l---~~I~~i~~~~~ 254 (480)
.+....+.-+++..++.+...+++.||++++|+++.... -+...+++|++.+-.+.+| .+.|| ++|.++|++||
T Consensus 109 ~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~g 188 (384)
T KOG1368|consen 109 RYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHG 188 (384)
T ss_pred ehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccC
Confidence 776655554444477888888899999999999998543 1356789999999999999 77775 66788899999
Q ss_pred cEEEeecccccccc---ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 255 MWLHVDAAWGGGLL---LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 255 ~~l~vD~a~~~~~~---~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+.+|+|||.-.-+. -.+..+. .+.+||+++.++|.+++|. |-+++.++.++..+......
T Consensus 189 lkLH~DGARi~NAavasgV~vk~i-----~~~fDSVsiCLSKglgAPV--GSViVG~k~FI~kA~~~RKa---------- 251 (384)
T KOG1368|consen 189 LKLHMDGARIFNAAVASGVPVKKI-----CSAFDSVSICLSKGLGAPV--GSVIVGSKDFIDKARHFRKA---------- 251 (384)
T ss_pred CeeecchhhhhhHHHHcCCCHHHH-----HHhhhhhhhhhhccCCCCc--ccEEEccHHHHHHHHHHHHH----------
Confidence 99999997544322 1221111 2378999999999999975 55667788777654321111
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccC
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVR 410 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~ 410 (480)
+.+|-|-..+-+.++|-.+ .+. -..++..++.++.+.+.+.+ .+++++-.+ .+.+++........+
T Consensus 252 ---------lGGGmRQsGvLaaaaLval-~~~-~~~L~~dHk~A~~lAe~~~~-~~~i~v~v~a~etNiv~~~l~q~~~- 318 (384)
T KOG1368|consen 252 ---------LGGGMRQSGVLAAAALVAL-DEN-VPLLRADHKRAKELAEYINT-PEEIRVEVPAVETNIVNMVLCQARL- 318 (384)
T ss_pred ---------hcCchhHHHHHHHHHHHHh-hcc-hHHHHHHHHHHHHHHHHhcc-ccceeeecchhhcceeeeecccccC-
Confidence 1122222222222333332 222 23667788889999999998 666887544 455555443332222
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
+ ..++.+.+.+.|+..+... ...+|++ .++..|+++++.++..+.+
T Consensus 319 -----------~--~~~l~~~~~k~gi~lm~~~-----s~r~Riv-lh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 319 -----------T--AEELCKFLEKNGILLMGGA-----SRRIRIV-LHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred -----------C--HHHHHHHHHHCCeEEeecc-----ccceEEE-EEEecCHHHHHHHHHHHHH
Confidence 1 3467788888887665542 2458999 9999999999999999954
No 89
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.6e-21 Score=193.54 Aligned_cols=321 Identities=12% Similarity=0.045 Sum_probs=213.8
Q ss_pred HHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...++. ..+.|. .++...+.+.+.+++.+..|. ++ .++++|+|+++++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~------------- 115 (399)
T PRK07681 50 VREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYAN------------- 115 (399)
T ss_pred HHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCC-------------
Confidence 44555554432 223332 356677888888888877775 55 6899999999999888877654
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|+++.++|+.+...+..+|. +++.+|.+++ +.+|++++++++.+. +++|++++|+||||.+.+
T Consensus 116 -~Gd-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s 184 (399)
T PRK07681 116 -PGD-IILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPAMAH 184 (399)
T ss_pred -CCC-EEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCcCCC
Confidence 556 788999999999999999998 8889998753 578999999888654 889999999999999977
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
+++|.++|++||+++++|++|+........... ..+.+.....++..|++|.++ .+..+|+++. ++.+......
T Consensus 185 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~ 263 (399)
T PRK07681 185 EDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQ 263 (399)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHHHHHH
Confidence 788889999999999999999976542211100 001111123456679999997 4467999985 4545443321
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
... +... ....+...++...+ +.+.+++..+...+..+.+.+.|++ . |+++. .|
T Consensus 264 ~~~-~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~p 319 (399)
T PRK07681 264 FKS-NTDY--------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT-F-GWNVD-KP 319 (399)
T ss_pred HHh-hccc--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCccc-CC
Confidence 110 0000 01122222222222 3455667777778888999999998 5 78763 56
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
..+.++|...+.... ..++...+.+ .|+.+.+...+.. ..+++|+++. .+++++++++++|
T Consensus 320 ~~g~f~~~~l~~~~~--------------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l 382 (399)
T PRK07681 320 AGSMFVWAEIPKGWT--------------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENI 382 (399)
T ss_pred CeeeEEEEECCCCCC--------------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHH
Confidence 667766654443211 2356667766 6754443222221 1469999954 3689999999999
Q ss_pred HHh
Q psy12303 474 DRL 476 (480)
Q Consensus 474 ~~~ 476 (480)
++.
T Consensus 383 ~~~ 385 (399)
T PRK07681 383 RNS 385 (399)
T ss_pred HHh
Confidence 884
No 90
>PLN02656 tyrosine transaminase
Probab=99.91 E-value=1e-21 Score=195.34 Aligned_cols=330 Identities=12% Similarity=0.044 Sum_probs=217.2
Q ss_pred hHHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 88 MAGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 88 ~~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
.+.+.+...+..+ ...|....+..++.+.+.+++.+..|. ++.++++|+|+++|+..++.+..+
T Consensus 52 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------------- 118 (409)
T PLN02656 52 VAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLAR------------- 118 (409)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhC-------------
Confidence 3335555444433 345655666778888888888777664 567899999999999988887654
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc-
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD- 241 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~- 241 (480)
||+ .|++++++|+.+...+...|+ +++.+|+++ ++.+|++++++++++. +++|++++|+||||.+.
T Consensus 119 -~gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 119 -PGA-NILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYS 187 (409)
T ss_pred -CCC-eEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCC
Confidence 556 788889999988888888888 788888853 4689999999888654 78999999999999994
Q ss_pred --ChHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCC-cccceEEEEeC-------ch
Q psy12303 242 --PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQ-------DG 310 (480)
Q Consensus 242 --~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~-------~~ 310 (480)
++++|.++|++||+++++|++|+...+....... ..+... .--+++.|++|.++. +..+|+++..+ ..
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~ 266 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI-VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPK 266 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhccc-CcEEEEcccchhccCcceeEEEEEEeCcccccccHH
Confidence 5889999999999999999999976542211100 001111 122456789998554 47899999753 23
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
...........+. . ...+...++...+ ....+++..++..+.++.+.+.|++ ++
T Consensus 267 ~~~~~~~~~~~~~-~---------------------~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~ 323 (409)
T PLN02656 267 IVERIKKYFDILG-G---------------------PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE-IP 323 (409)
T ss_pred HHHHHHHHHhhhc-C---------------------CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CC
Confidence 3332221100000 0 1122223332222 2456777788888889999999998 76
Q ss_pred CeEEecCCceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHH
Q psy12303 388 KFYLILEPEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di 466 (480)
++....+|..+.++|...+.. ..+.... ...+.+.+.+.|+.+++...+ +..+++|+++.. +++++
T Consensus 324 ~~~~~~~p~gg~~~w~~l~~~~~~~~~~~---------~~~~~~~l~~~gV~v~pg~~f-g~~~~iRi~~~~---~~e~l 390 (409)
T PLN02656 324 CITCPHKPEGSMAVMVKLNLSLLEDISDD---------IDFCFKLAREESVIILPGTAV-GLKNWLRITFAA---DPSSL 390 (409)
T ss_pred CCcCCcCCCeEEEEEEecchhhcCCCCCH---------HHHHHHHHHhCCEEEecchhc-CCCCeEEEEeCC---CHHHH
Confidence 654334677877776544311 0100000 012345566777655543333 336899999542 68999
Q ss_pred HHHHHHHHHhhc
Q psy12303 467 DFLLTEMDRLGH 478 (480)
Q Consensus 467 ~~~~~~l~~~~~ 478 (480)
++.+++|++++.
T Consensus 391 ~eal~rl~~~~~ 402 (409)
T PLN02656 391 EEALGRIKSFYL 402 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 91
>PRK09082 methionine aminotransferase; Validated
Probab=99.91 E-value=7.6e-22 Score=195.02 Aligned_cols=322 Identities=11% Similarity=0.054 Sum_probs=214.6
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--C-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--G-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
+.+...+......|....+...+++++.+++.+++|.+ + .++++|+|+++|+..++.+... ||
T Consensus 50 ~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~--------------~g 115 (386)
T PRK09082 50 EALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVR--------------PG 115 (386)
T ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcC--------------CC
Confidence 44444443333456556667889999999999999974 2 3799999999999988877653 55
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cCh
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPI 243 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l 243 (480)
+ .|+++.++|.++..+++..|. +++.+|.+. ++.+|++++++++++. +++|++++++||||.+ .++
T Consensus 116 d-~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~ 185 (386)
T PRK09082 116 D-EVIVFDPSYDSYAPAIELAGG---RAVRVALQPPDFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAADM 185 (386)
T ss_pred C-EEEEeCCCchhhHHHHHHcCC---EEEEEecCcccccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHHHH
Confidence 6 788999999999999999887 888999864 5789999999998754 8899999999999987 568
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
++|.++|++||+++++|++|+...+....... -.+.+...-.++..|++|.++.| ..+|+++.. ++.+....... .
T Consensus 186 ~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~~~~~~~-~ 263 (386)
T PRK09082 186 RALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSAEFRKVH-Q 263 (386)
T ss_pred HHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHHHHHHHH-h
Confidence 99999999999999999999876542211111 01122223456777999999744 678998864 44444322111 0
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN 399 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~ 399 (480)
+... ....+...++...+ ..+.++++.+...++.+++.+.|++ .++++ .++.++.
T Consensus 264 ~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~--~~~~~-~~~~g~~ 320 (386)
T PRK09082 264 YNTF--------------------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN--SRFKL-LPCEGTY 320 (386)
T ss_pred hhcC--------------------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh--CCCcc-cCCCeeE
Confidence 0000 01111222222222 3455677777788889999999998 57876 3566776
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
++|...+. +.+.+ ..++.+.|. +.|+.+.+...+. ...+++|+++. .+++++++.+++|++
T Consensus 321 ~~~~~~~~-~~~~~-----------~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~---~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 321 FQLVDYSA-ISDLD-----------DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA---KQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEeccc-cCCCC-----------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence 66543332 11111 134556654 4564443332221 11479999954 268999999998875
Q ss_pred h
Q psy12303 476 L 476 (480)
Q Consensus 476 ~ 476 (480)
+
T Consensus 386 ~ 386 (386)
T PRK09082 386 L 386 (386)
T ss_pred C
Confidence 3
No 92
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=1.9e-21 Score=189.60 Aligned_cols=301 Identities=15% Similarity=0.125 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC---------CccCCceEEEecCCCchh-
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL---------SAIKGQLVMFTSDQCHYS- 180 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~---------~~~~g~~~vl~~~~~h~s- 180 (480)
.++.+++.+++++++|.+. +++|+|+|+|+..++.++... |. ...+++ .|+++.+.++.
T Consensus 44 ~~~~~~~~~~~a~~~g~~~--~~~~~g~t~al~~al~al~~~--------Gd~~~~~~~~~s~~~~~-eVi~~~~~~~~~ 112 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVED--AVIVSSASAGIAQSVAAVITR--------GNRYLVENLHDSKIEVN-EVVLPKGHNVDY 112 (363)
T ss_pred HHHHHHHHHHHHHhhCCCe--EEEEcCHHHHHHHHHHHHhcC--------CCcchhhcccccccccc-eEEEECccchhc
Confidence 4667788999999999864 899999999999999987542 21 011334 56666533322
Q ss_pred ---HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEE-eccCCCccccccChHHHHHHHHHcCcE
Q psy12303 181 ---VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVN-CTSGTTVLGAFDPIEEIADICQKYNMW 256 (480)
Q Consensus 181 ---~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~-~~~~~~~~G~~~~l~~I~~i~~~~~~~ 256 (480)
+..++...|. ++++++. ++.+|+++++++|+++ |++|+ ++.+++++|.+.|+++|.++|++||++
T Consensus 113 ~~~~~~~~~~~g~---~~v~v~~--~~~~d~~~le~ai~~~------t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~ 181 (363)
T TIGR01437 113 GAPVETMVRLGGG---KVVEAGY--ANECSAEQLEAAITEK------TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLP 181 (363)
T ss_pred CCchHHHHHhcCC---eEEEEcC--CCCCCHHHHHHhcChh------ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCe
Confidence 2456666777 6677765 4679999999999877 77665 567778999999999999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+|+|+||+... ...... ++|++++|+||++++|. .|+++. +++.+........ ... ..+..
T Consensus 182 vivD~a~~~~~--~~~~~~-------g~D~~~~S~~K~l~gp~-~G~l~~-~~~~i~~~~~~~~----~~~----~~~~~ 242 (363)
T TIGR01437 182 LIVDAAAEEDL--QKYYRL-------GADLVIYSGAKAIEGPT-SGLVLG-KKKYIEWVKLQSK----GIG----RAMKV 242 (363)
T ss_pred EEEECCCCCch--HHHHHc-------CCCEEEEeCCcccCCCc-eEEEEE-cHHHHHHHHhccC----CCc----ceecc
Confidence 99999997211 001112 68999999999999876 677664 4444443211100 000 00000
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce-e----EEEEEeecCccCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM-V----NVSFWYLPTRVRN 411 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~-~----~v~f~~~~~~~~~ 411 (480)
+. ...+++..++..+-..+ .+.++...+.++++.+.|.+ ++|+++..++.. . .+.+.+.... .+
T Consensus 243 -------~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~-i~g~~~~~~~~~~~~~~~~~~v~~~~~~-~g 311 (363)
T TIGR01437 243 -------GK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNT-LKGVSASIVQDEAGRDIARAEIRFDESE-LG 311 (363)
T ss_pred -------CH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCcCceEEEEEeccC-CC
Confidence 00 11244444554442222 23344445567789999999 899998743211 0 1222222211 01
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.+ ..++.++|.+.+.-+........ .+.+|+. +.. ++++|++.++++|++++
T Consensus 312 ~~-----------~~~l~~~L~~~~~~I~~r~~~~~-~~~~~l~-~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 312 MT-----------AADVVQALRQGEPAIYTRGYKAN-EGIIEID-PRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred CC-----------HHHHHHHHhcCCCCEEEeeeeec-CCeEEEE-eec-CCHHHHHHHHHHHHHhC
Confidence 11 24677778766632222211222 5688888 443 56999999999998763
No 93
>PRK08960 hypothetical protein; Provisional
Probab=99.91 E-value=1.1e-21 Score=194.18 Aligned_cols=325 Identities=11% Similarity=0.018 Sum_probs=210.9
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
+..+. +.+...+......|....+..++.+.+++++.+..| ++++++++|+|+++|+..++.+..+
T Consensus 47 ~~~v~-~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~----------- 114 (387)
T PRK08960 47 AEPIV-AAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVD----------- 114 (387)
T ss_pred CHHHH-HHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcC-----------
Confidence 34444 444544443334565566677888888888877666 4678899999999999988877643
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
||+ .|+++.++|+++...+...|. +++.+|++.+ +.+|++++++++++. ++++++++++||||.+
T Consensus 115 ---~gd-~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 115 ---PGK-HWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNAD------TVGALVASPANPTGTL 181 (387)
T ss_pred ---CCC-EEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCcc------ceEEEEECCCCCCCcC
Confidence 556 888999999999999998887 7888888653 579999999988765 7788999999999999
Q ss_pred cC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhh
Q psy12303 241 DP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 241 ~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~ 316 (480)
.+ +++|+++|++||+++++|++|....... . .. .......--+++.|++|.++ .+..+|+++.. +..+....
T Consensus 182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~-~-~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~ 257 (387)
T PRK08960 182 LSRDELAALSQALRARGGHLVVDEIYHGLTYGV-D-AA-SVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAP-PAAVPELE 257 (387)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCC-C-CC-ChhhccCCEEEEeecccccCCcccEEEEEEcC-HHHHHHHH
Confidence 77 5567777899999999999998754321 1 11 11122222356679999996 44679998865 34443322
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.....+.. + ...+...++...+ ..+.+.+..+...+.++.+.+.|++ . ++.+..
T Consensus 258 ~~~~~~~~------------------~---~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~-~-~~~~~~ 314 (387)
T PRK08960 258 KLAQNLYI------------------S---ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE-L-GFGIAV 314 (387)
T ss_pred HHHhhhcc------------------C---CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcCCc
Confidence 11111100 0 1122222222222 2345566667777888889999988 4 666544
Q ss_pred CCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHH
Q psy12303 394 EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 394 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~ 469 (480)
.|..+.+.|.-.+.. ..+ ..++.+.+. +.|+. +.++...+ ..+++|+++.. +.+.+...
T Consensus 315 ~p~g~~f~~~~~~~~--~~~-----------~~~~~~~ll~~~gi~-v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~a 377 (387)
T PRK08960 315 EPQGAFYLYADISAF--GGD-----------AFAFCRHFLETEHVA-FTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEA 377 (387)
T ss_pred CCCeeEEEEEecccc--CCC-----------HHHHHHHHHHhCCEE-EcCchHhCCCCCCCeEEEEecC---CHHHHHHH
Confidence 566666666433321 000 134556655 45654 44332222 14699999543 57888888
Q ss_pred HHHHHHhhc
Q psy12303 470 LTEMDRLGH 478 (480)
Q Consensus 470 ~~~l~~~~~ 478 (480)
++.|.++++
T Consensus 378 l~~l~~~~~ 386 (387)
T PRK08960 378 VERIARGLR 386 (387)
T ss_pred HHHHHHHHh
Confidence 888877653
No 94
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.91 E-value=5.6e-22 Score=193.47 Aligned_cols=286 Identities=16% Similarity=0.166 Sum_probs=196.7
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|++++++++|+|+|+++..++.++.+ +|+ .|+++.++|+.+...+...|. +
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~--------------~gd-~v~~~~p~y~~~~~~~~~~g~---~ 118 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLE--------------PGD-AVLVPPPTYSMYEISAKIHGA---E 118 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCCHHHHHHHHHHcCC---e
Confidence 3567778999998878899999999998877776643 445 788888888888888888888 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeecccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~ 272 (480)
++.+|.++++.+|++++++++.+. +++|++++++|++|.+.|++++.++|+.+ ++++++|++|+........
T Consensus 119 ~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~ 192 (346)
T TIGR01141 119 VVKVPLDEDGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPST 192 (346)
T ss_pred EEEeccCCCCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccH
Confidence 899999888889999999876543 88999999999999999999999999987 9999999999854321110
Q ss_pred ccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
.+..... ..++++.|++|+++.| .++|+++. ++..+.........+. ...+.
T Consensus 193 --~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~-----------------------~~~~~ 245 (346)
T TIGR01141 193 --LPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDALNKVRAPFN-----------------------LSRLA 245 (346)
T ss_pred --HHHHhhC-CCEEEEehhhHhhhchhhhceeeec-CHHHHHHHHhccCCCC-----------------------CCHHH
Confidence 0011111 2346677899999644 56899886 4444444332111110 11122
Q ss_pred HHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 352 LWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 352 ~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
...+...+. ...+.+..++..++++++.+.|++ ++|+++. ++....+++.+ +. . .+++.+
T Consensus 246 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~~~g~~~~~~~-~~--~--------------~~~~~~ 306 (346)
T TIGR01141 246 QAAAIAALRDDDFIEKTVEEINAERERLYDGLKK-LPGLEVY-PSDANFVLIRF-PR--D--------------ADALFE 306 (346)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEC-CCcCCEEEEec-CC--C--------------HHHHHH
Confidence 222222221 224677788888999999999999 7898864 44444444432 21 1 245677
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+|.+.|+.+.....+.+..+++|++ .+ +++|+++++++|+
T Consensus 307 ~L~~~gI~v~~g~~f~~~~~~iRls-~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 307 ALLEKGIIVRDLNSYPGLPNCLRIT-VG---TREENDRFLAALR 346 (346)
T ss_pred HHHHCCeEEEeCCCcCCCCCeEEEe-cC---CHHHHHHHHHHhC
Confidence 8888885443322221215799999 43 7999999998873
No 95
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=2.5e-21 Score=191.60 Aligned_cols=315 Identities=13% Similarity=0.083 Sum_probs=210.3
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+..++.+.+++++.+.+|. ++. ++++|+|+++|+..++.+..+ ||+ .|+++.++|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~--------------~gd-~Vlv~~p~y 121 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVE--------------PGD-EVVLFQPLY 121 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcC--------------CCC-EEEEeCCCc
Confidence 44655556678888888888887775 455 899999999999877776643 555 788899999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcC
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYN 254 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~ 254 (480)
+.+...+...|. +++.+|.++ ++.+|+++|++.+.+. +++|++++++||||.+.+ +++|.++|++|+
T Consensus 122 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~ 192 (387)
T PRK08912 122 DAYLPLIRRAGG---VPRLVRLEPPHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQRHD 192 (387)
T ss_pred hhhHHHHHHcCC---EEEEEecCcccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence 999999999988 888899864 6789999999988654 789999999999999976 677899999999
Q ss_pred cEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
+++++|++|+........... ..+.+....++++.|++|.++ .+..+|+++.. ++...........+...
T Consensus 193 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~~------- 264 (387)
T PRK08912 193 AVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLRVLAKAHQFLTFT------- 264 (387)
T ss_pred eEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHHHHHHHHHHhhcccc-------
Confidence 999999999865442111110 012222345688899999998 44678998864 44443332111110000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC-ccCC
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT-RVRN 411 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~-~~~~ 411 (480)
.+. .....+...+.. ..+.+++..++..+.++++.+.|++ . |+++. +|..+.+.+...+. .. .
T Consensus 265 ----------~~~-~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~g~~~l~~~l~~~~~-~ 328 (387)
T PRK08912 265 ----------TPP-NLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRR-I-GFPVL-PSQGTYFLTVDLAPLGL-A 328 (387)
T ss_pred ----------CCh-HHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHh-C-CCccc-CCCcceEEEecccccCC-C
Confidence 000 001111111211 2445677778888899999999999 4 78764 56666555533322 10 0
Q ss_pred CchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 412 MPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+ ..++.+.+. +.|+.+.+...+. ...+++|+++.. .+++++..+++|++.++
T Consensus 329 ~~-----------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 329 ED-----------DVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR 385 (387)
T ss_pred CC-----------HHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 00 134666665 4575444332221 115799999553 58999999999988765
No 96
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=3e-21 Score=192.26 Aligned_cols=331 Identities=13% Similarity=0.079 Sum_probs=217.3
Q ss_pred hHHhHHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhC--------CCCCCeEECCChhHHHHHHHHHHHHhcCc
Q psy12303 85 VVSMAGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIG--------WQGGDSILAPGGSISNLYAFLAARHKMFP 155 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g--------~~~~~~~~t~ggt~a~~~al~~~~~~~~~ 155 (480)
++..+.+.+...++. ....|....+..++.+.+.+++.+.++ +++.++++|+|+++++..++.+..+
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~---- 126 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD---- 126 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence 344455666555443 234455444567788888888876543 5668899999999999999887754
Q ss_pred hhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccC
Q psy12303 156 TYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSG 233 (480)
Q Consensus 156 ~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 233 (480)
||+ .|+++.++|+.+...++..|+ +++.+|.++ ++.+|+++|++++++. +++|+++++
T Consensus 127 ----------~gd-~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p 186 (412)
T PTZ00433 127 ----------EGD-NILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNP 186 (412)
T ss_pred ----------CCC-EEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCC
Confidence 556 788999999999999999998 788888864 5789999999888654 889999999
Q ss_pred CCccccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC--CCccceeCccccCC-CcccceEEEEe
Q psy12303 234 TTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE--RADSVTWNPHKLMG-TLLQCSTIHFK 307 (480)
Q Consensus 234 ~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~~D~~~~s~hK~~~-~p~~~g~~~~~ 307 (480)
+||||.+.+ +++|.++|+++|+++++|++|........... .+..+. ..-+++.|++|.++ .+..+|++++.
T Consensus 187 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~ 264 (412)
T PTZ00433 187 SNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFT--SVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLV 264 (412)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCcc--chhhccCCCceEEEccchhhcCCCCeeEEEEEEe
Confidence 999998765 77889999999999999999986553211111 111111 11256679999985 44789999973
Q ss_pred Cc-----hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHH
Q psy12303 308 QD-----GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMV 379 (480)
Q Consensus 308 ~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~ 379 (480)
++ ..+........... . ...+...+....+ ....+++..++..+..+.+.
T Consensus 265 ~p~~~~~~~~~~~~~~~~~~~-~---------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 265 DPHGNGGDFLDGMKRLGMLVC-G---------------------PCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred CCcccHHHHHHHHHHHhhccC-C---------------------CChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 32 23322211110000 0 1122222222222 24556777778888899999
Q ss_pred HHHhcCCCCeEEecCCceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCcccEEEEecc
Q psy12303 380 KKIKSMPDKFYLILEPEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDLPNFFRNIIS 457 (480)
Q Consensus 380 ~~l~~~~~g~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~~~~~R~~~~ 457 (480)
+.|++ ..++.+ ..|+.+.++|.-.+.. ..+.. + ..++.+.|.+ .|+.+. ++...+..+++|+++.
T Consensus 323 ~~L~~-~~~~~~-~~p~gg~f~~~~l~~~~~~~~~--------~--~~~~~~~ll~~~gV~v~-pg~~f~~~~~iRis~~ 389 (412)
T PTZ00433 323 NHIGE-CIGLSP-TMPRGSMFLMSRLDLEKFRDIK--------S--DVEFYEKLLEEENVQVL-PGEIFHMPGFTRLTIS 389 (412)
T ss_pred HHHhc-CCCCcc-cCCCeeEEEEEEechhhcCCCC--------C--HHHHHHHHHHhcCEEEe-CccccCCCCeEEEEec
Confidence 99988 667765 3677776665433321 00000 0 2356677764 675444 3333333679999954
Q ss_pred cCCCCHHHHHHHHHHHHHhhcc
Q psy12303 458 SAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 458 ~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++++++.+++|.+++++
T Consensus 390 ---~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 390 ---RPVEVLREAVERIKAFCER 408 (412)
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 2488999999999887653
No 97
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=4.2e-21 Score=190.79 Aligned_cols=325 Identities=11% Similarity=0.048 Sum_probs=213.6
Q ss_pred HHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 91 EWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 91 ~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
+.+...++.. ...|....+..++.+.+.+++.+..|. +++++++|+|+++++..++.+..+ ||
T Consensus 56 ~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~--------------~g 121 (409)
T PLN00143 56 DAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLAR--------------PE 121 (409)
T ss_pred HHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcC--------------CC
Confidence 4444444432 244655566777888888888777654 667899999999999999887754 55
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
+ .|+++.++|+.+...+...|. +++.++.+ +++.+|+++|++++++. ++.+++++|+||||.+.+
T Consensus 122 d-~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG~~~s~~~ 191 (409)
T PLN00143 122 A-NILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCGSVYSYEH 191 (409)
T ss_pred C-EEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCCCccCHHH
Confidence 6 788999999999999999988 78888874 34679999999887654 788999999999999977
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCC--CccceeCccccCCCc-ccceEEEEeCc-hhhH-----
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER--ADSVTWNPHKLMGTL-LQCSTIHFKQD-GLLI----- 313 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~--~D~~~~s~hK~~~~p-~~~g~~~~~~~-~~~~----- 313 (480)
+++|.++|++|++++++|++|.......... . .+..+.. --+++.|++|.++.| ..+|+++..++ ....
T Consensus 192 ~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~-~-~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~ 269 (409)
T PLN00143 192 LNKIAETARKLGILVIADEVYGHIVFGSKPF-V-PMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIA 269 (409)
T ss_pred HHHHHHHHHHcCCeEEEEccccccccCCCCC-c-chhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHH
Confidence 7788888999999999999998765421110 0 1111111 125667999995544 78999987543 2211
Q ss_pred -hhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 314 -SCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 314 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
.......... + ...+...+....+ ....+++.+++..+..+++.+.|.+ +++.
T Consensus 270 ~~~~~~~~~~~-------------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~ 326 (409)
T PLN00143 270 DSIKKALNPAP-------------------F---PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE-IPCI 326 (409)
T ss_pred HHHHHHHhccC-------------------C---CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence 1110000000 0 0112222222222 2456788888888888889999988 6655
Q ss_pred EEecCCceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHH-HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHH
Q psy12303 390 YLILEPEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILK-GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 390 ~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~-~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~ 467 (480)
.....|..+.+.|...+.. ..+... ..++. ..+.+.|+.+.....+ +..+++|+++. +++++++
T Consensus 327 ~~~~~p~gg~f~w~~l~~~~~~~~~~----------~~~~~~~ll~~~gV~v~pg~~f-~~~~~iRi~~~---~~~~~l~ 392 (409)
T PLN00143 327 MCPQKAEGAFFALVKLNLLLLEDIED----------DMEFCLKLAKEESLIILPGVTV-GLKNWLRITFA---VEQSSLE 392 (409)
T ss_pred CCCCCCCeeEEEEEecchhhcCCCCC----------HHHHHHHHHHhCCEEEeCcccc-CCCCeEEEEEc---CCHHHHH
Confidence 4344677777776544321 000000 12333 3445677554443333 33689999954 3589999
Q ss_pred HHHHHHHHhhc
Q psy12303 468 FLLTEMDRLGH 478 (480)
Q Consensus 468 ~~~~~l~~~~~ 478 (480)
+.+++|+++++
T Consensus 393 ~al~rl~~~l~ 403 (409)
T PLN00143 393 DGLGRLKSFCG 403 (409)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 98
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=4.4e-21 Score=189.81 Aligned_cols=327 Identities=12% Similarity=0.113 Sum_probs=210.5
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC---CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW---QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~---~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
.+.+...+......|....+..++++.+++++...+|. ++.++++|+|+++|+..++.+... |
T Consensus 49 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--------------~ 114 (391)
T PRK07309 49 KEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILE--------------P 114 (391)
T ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------------C
Confidence 34444333322233544455678888888888887776 246899999999999988887643 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
|+ .|++..+.|..+...++..|. +++.+|.++ ++.+|+++|++++++. +.++++|++++|+||||.+.+
T Consensus 115 gd-~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~ 187 (391)
T PRK07309 115 GD-KVLLPAPAYPGYEPIVNLVGA---EIVEIDTTENDFVLTPEMLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQ 187 (391)
T ss_pred CC-EEEEeCCCCcchHHHHHHcCC---EEEEEecCCcCCcCCHHHHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHH
Confidence 46 788888899999999999888 788898865 4679999999998652 123789999999999999865
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
+++|.++|++||+++++|++|+......... .+.......-.+++.|++|.++. +..+|+++.. ++.+...... ..
T Consensus 188 ~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~~~-~~ 264 (391)
T PRK07309 188 IKALADVLKKYDIFVISDEVYSELTYTGEPH-VSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLIKS-HQ 264 (391)
T ss_pred HHHHHHHHHHcCcEEEEEccccceeeCCCCC-CCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHHHH-Hh
Confidence 8889999999999999999998765422111 10111111223667799999974 4678888864 4444433211 11
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN 399 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~ 399 (480)
+.... ...+...+....+ +........++..+.++++.+.|++ . ++.+. +|..+.
T Consensus 265 ~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~-~p~gg~ 321 (391)
T PRK07309 265 YLVTA--------------------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD-L-GFKII-KPDGAF 321 (391)
T ss_pred hcccC--------------------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH-C-CCeec-CCCeeE
Confidence 11100 1112222222222 2222344556667778889999988 4 77764 566666
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.|.-.|..... + ..++.+++. +.|+ .+.++...+ ..+++|+++. .+.++++..+++|+++
T Consensus 322 ~~~~~l~~~~~~-~-----------~~~~~~~l~~~~gv-~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~i~~l~~~ 385 (391)
T PRK07309 322 YIFAKIPAGYNQ-D-----------SFKFLQDFARKKAV-AFIPGAAFGPYGEGYVRLSYA---ASMETIKEAMKRLKEY 385 (391)
T ss_pred EEEEECCCCCCC-C-----------HHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHH
Confidence 555333332110 0 124555544 5564 444433222 1579999954 2578999999999988
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 386 ~~~ 388 (391)
T PRK07309 386 MEE 388 (391)
T ss_pred HHh
Confidence 765
No 99
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=7.9e-22 Score=195.48 Aligned_cols=308 Identities=16% Similarity=0.122 Sum_probs=195.2
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH-HHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV-RSCA 185 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~-~~~~ 185 (480)
.+...++|+.+.+.+++++|.+. ..++++||+.||..++.+... ||+ .|+++...|.++ ...+
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~-alv~~~SG~~A~~~~l~al~~--------------~GD-~Vl~~~~~~~~~~~~g~ 132 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDY-ANVQPHSGSQANGAVYLALLK--------------PGD-TILGMSLSHGGHLTHGA 132 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc-eEEecCCcHHHHHHHHHHhcC--------------CCC-EEEEcCccceeeeecCC
Confidence 36667788767778999999975 225678999999999988753 556 899999999872 3222
Q ss_pred HHcCCCCCCe--EEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 186 AVCGLGTDNC--VEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 186 ~~~g~~~~~v--~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
.....+. .+ ..++++. ++.+|++++++.++.. ++++|+++.+ .+|...|+++|.++|++||+++++|+|
T Consensus 133 ~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~klVi~~~~--~~g~~~dl~~l~~la~~~g~~livD~A 204 (416)
T PRK13034 133 KVSLSGK-WYNAVQYGVDRLTGLIDYDEVEELAKEH-----KPKLIIAGFS--AYPRELDFARFREIADEVGALLMVDMA 204 (416)
T ss_pred cceeccc-eeeeEEcccccccCCcCHHHHHHHHhhc-----CCeEEEECCC--ccccccCHHHHHHHHHHcCCEEEEeCc
Confidence 2211110 11 2444443 4679999999988652 2778877543 468888999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|+.|....+... ..+..+|++++++||++++|.| |+++.++.......... .+.. ++
T Consensus 205 ha~G~~~~g~~~----~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~----~~~~--------------~~ 261 (416)
T PRK13034 205 HIAGLVAAGEHP----NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSA----VFPG--------------LQ 261 (416)
T ss_pred ccccCcccCCCC----CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhh----cCCc--------------cc
Confidence 999887544321 1223689999999999987765 55555555433322211 1110 00
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCchhhHHHH
Q psy12303 343 CGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 343 ~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
.+... ...++..++...-..+..++.++.++++++|++.|++ . |+++..+ ....++.+.+......
T Consensus 262 ~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~-~-G~~~~~~~~~t~i~~v~~~~~~~~---------- 329 (416)
T PRK13034 262 GGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKE-R-GYDLVSGGTDNHLLLVDLRPKGLS---------- 329 (416)
T ss_pred CCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH-c-CCEeccCCCCCcEEEEEcCCCCCC----------
Confidence 01001 1122222232221123356678999999999999999 4 9998642 3444444433221110
Q ss_pred hhhhhHHHHHHHHhcccEEEeee-----eeCCcccEEEEecccC----CCCHHHHHHHHHHHHHhhc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQ-----PLNDLPNFFRNIISSA----AVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~-----~~~~~~~~~R~~~~~~----~~t~~di~~~~~~l~~~~~ 478 (480)
...+.++|.+.|+.+.... ........+|++ .+. .++++||+++++.|++++.
T Consensus 330 ----~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~-~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 330 ----GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIG-TPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred ----HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeC-cHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 1244567777785433210 001114579999 666 7779999999999998765
No 100
>KOG2862|consensus
Probab=99.91 E-value=2.6e-21 Score=171.65 Aligned_cols=347 Identities=14% Similarity=0.126 Sum_probs=240.3
Q ss_pred cccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCch
Q psy12303 78 QLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPT 156 (480)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~ 156 (480)
+.|+|...+..+ ..+++.+...+ .+|.+.++..++.+-+...|.... .--++..+|+.+...|+.-..+
T Consensus 21 ~gPGPsnl~~~V----~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~le----- 90 (385)
T KOG2862|consen 21 LGPGPSNLSGRV----QEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLE----- 90 (385)
T ss_pred ecCCCcCCCHHH----HHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcC-----
Confidence 345665555333 33344443333 578889999999999999998854 3456777888888877755543
Q ss_pred hHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 157 YKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 157 ~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
||| .|++-...-.+ +...++.+|+ +|..|+.+....+.++.+++++.+. +|.+|+++++.
T Consensus 91 ---------Pgd-~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~~~~le~i~~~lsqh-----~p~~vfv~hgd 152 (385)
T KOG2862|consen 91 ---------PGD-NVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQAVPLEEITEKLSQH-----KPKAVFVTHGD 152 (385)
T ss_pred ---------CCC-eEEEEEechHHHHHHHHHHhhCc---eeeEEecCcccCccHHHHHHHHHhc-----CCceEEEEecC
Confidence 667 44443333333 3445566777 8888988888899999999999886 38999999999
Q ss_pred CccccccC-hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhH
Q psy12303 235 TVLGAFDP-IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLI 313 (480)
Q Consensus 235 ~~~G~~~~-l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~ 313 (480)
+.||...| ++.+.++|++|+.+++||++.+.+...+....+ ++|+.-...+|.+++|.|.+.+.+.++....
T Consensus 153 sSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew-------gVDvaytgSQKaL~aP~GLsiisfS~ka~~~ 225 (385)
T KOG2862|consen 153 SSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW-------GVDVAYTGSQKALGAPAGLSIISFSDKALEA 225 (385)
T ss_pred ccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh-------cccEEEecchhhcCCCCCcceeecCHHHHHH
Confidence 99999999 788999999999999999999999888877778 9999999999999999999998877664322
Q ss_pred hhhcCC--cccccccccccCcccC----CCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 314 SCNQMS--AEYLFMQDKLYDVRYD----TGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 314 ~~~~~~--~~~l~~~~~~~~~~~~----~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
-..+.. ..+++....- ...|. ++.|. -+-+. ....+-++|..+-.+|+++.++++++++++++..|++
T Consensus 226 ~~~rK~~~~~~yFd~~~~-~~~wgc~~e~~~yh--hT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~-- 300 (385)
T KOG2862|consen 226 IRDRKTKPVSFYFDILRL-GNFWGCDGEPRAYH--HTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEA-- 300 (385)
T ss_pred HhhccCCceEEEEeHHhh-cchhccCCcccccc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 111111 2222221110 00110 11110 01001 1123445566667999999999999999999999999
Q ss_pred CCeEEecC---CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCH
Q psy12303 387 DKFYLILE---PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTE 463 (480)
Q Consensus 387 ~g~~~~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~ 463 (480)
-|+++... +....+.-.-.|...+ -+++..++++++.+-+..+-..-.+.++|+.......+.
T Consensus 301 ~GLq~fv~~e~~rlptvttv~vp~gvD--------------w~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~ 366 (385)
T KOG2862|consen 301 LGLQLFVVDEELRLPTVTTVKVPYGVD--------------WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANV 366 (385)
T ss_pred hCccceecChhhccCcceeeecCCCCC--------------HHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCc
Confidence 68876542 2233333333343332 357888999997665554322222579999988888999
Q ss_pred HHHHHHHHHHHHhhc
Q psy12303 464 GDIDFLLTEMDRLGH 478 (480)
Q Consensus 464 ~di~~~~~~l~~~~~ 478 (480)
+-|+.+++.|+..++
T Consensus 367 e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 367 EYIDNVVELLKLALQ 381 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987764
No 101
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=3.2e-21 Score=195.41 Aligned_cols=331 Identities=13% Similarity=0.085 Sum_probs=213.9
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
...|....+..++.+.+.+++.+..|. +++++++|+|+++|+..++.+.... ||+ .|+++.++|
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------------~gD-~Vlv~~P~y 173 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD-------------PSD-GVMIPIPQY 173 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC-------------CCC-EEEECCCCc
Confidence 345666677788888988988887665 5678999999999999999887521 556 899999999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
+.+...++..|. +++.+|+++ ++.+|+++|++++++...++.++++|++++|+||||.+.+ +++|+++|++|
T Consensus 174 ~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~ 250 (481)
T PTZ00377 174 PLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEK 250 (481)
T ss_pred hhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHC
Confidence 999999999998 788888874 3689999999999875544556899999999999999987 88899999999
Q ss_pred CcEEEeeccccccccccc-cccC--cccCCCCC-----Cc-cceeCccccC-C-CcccceEEEE--eCchhhHhhhcCCc
Q psy12303 254 NMWLHVDAAWGGGLLLSK-KYRH--PRLTGIER-----AD-SVTWNPHKLM-G-TLLQCSTIHF--KQDGLLISCNQMSA 320 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~-~~~~--~~~~~~~~-----~D-~~~~s~hK~~-~-~p~~~g~~~~--~~~~~~~~~~~~~~ 320 (480)
|+++++|++|+...+..+ .+.. +...++.. .. ++..|++|.+ + .+..+|++++ .++++.........
T Consensus 251 ~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~ 330 (481)
T PTZ00377 251 GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLAS 330 (481)
T ss_pred CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhh
Confidence 999999999987544111 1100 00111111 11 3455899964 4 4578999886 25555444332111
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-----cH-------HHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-----GD-------EGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-----g~-------~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
.+. + ...+...++...+ +. ..+.+..++..+.++.+.+.|++ ++|
T Consensus 331 ~~~-------------------~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~-~~g 387 (481)
T PTZ00377 331 INL-------------------C---SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK-IEG 387 (481)
T ss_pred eec-------------------C---CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 111 0 1112222222222 11 11223333456778889999999 789
Q ss_pred eEEecCCceeEEEEEeec--CccCCCchhhHHHHhhhhhHHH-HHHHHhcccEEEeeeeeCC--cccEEEEecccCCCCH
Q psy12303 389 FYLILEPEMVNVSFWYLP--TRVRNMPHEKRLNILGEITPIL-KGRMMQAGTMMVGYQPLND--LPNFFRNIISSAAVTE 463 (480)
Q Consensus 389 ~~~~~~~~~~~v~f~~~~--~~~~~~~~~~~~~~l~~~~~~i-~~~l~~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~ 463 (480)
+++. .|+.+.++|...+ ....+. .....+. ....+ ...+.+.|+.++....+.. ..+++|+++. .++
T Consensus 388 ~~~~-~p~gg~fl~~~~~l~~~~~~~---~~~~~~~-~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~ 459 (481)
T PTZ00377 388 VSCQ-PVEGAMYAFPRIELPEKAIQE---AKERGLA-PDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPE 459 (481)
T ss_pred cEee-cCCeeEEEEeeccCchhhHHH---HHhcCCC-cHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCH
Confidence 8874 6777777764322 111000 0000000 01122 3445566755554433321 1469999943 578
Q ss_pred HHHHHHHHHHHHhhcc
Q psy12303 464 GDIDFLLTEMDRLGHD 479 (480)
Q Consensus 464 ~di~~~~~~l~~~~~~ 479 (480)
+++++.+++|++++++
T Consensus 460 e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 460 EQIEEMVKKIKEFHES 475 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999887653
No 102
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.91 E-value=4.2e-21 Score=187.27 Aligned_cols=309 Identities=12% Similarity=0.064 Sum_probs=206.7
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+..++.+.+.+++.+..|. +++ ++++|+|+++|+..++.++.+. |. +|+ .|+++.++|
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~--------g~---~~d-~Vl~~~p~y 97 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDP--------EE---DRR-RVIFGTPGY 97 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCC--------CC---CCc-eEEEcCCCC
Confidence 44655556678888989999888785 555 8999999999998888776541 11 113 899999999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
+.+..+++.+|. +++.++.++ ++.+|++++++++.+. +++|++++++||||.+.+ +++|.++|++|
T Consensus 98 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~ 168 (350)
T TIGR03537 98 PVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAPRSYLKETIAMCREH 168 (350)
T ss_pred cchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHc
Confidence 999999999998 888998863 3568999999998765 889999999999999987 88999999999
Q ss_pred CcEEEeeccccccccccccccCcccCCCC-CCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLTGIE-RADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
|+++++|++|+......+.. ...... .-.+++.|++|.++.| ...|+++ .++............+..
T Consensus 169 ~~~ii~De~y~~~~~~~~~~---~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~~~~~~~------- 237 (350)
T TIGR03537 169 GIILCSDECYTEIYFGEPPH---SALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKLRANFGV------- 237 (350)
T ss_pred CcEEEEeccccccccCCCCC---chhhcCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHHHHhhcc-------
Confidence 99999999998654321110 111111 1235666899998644 5678776 455444433221111110
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccC
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~ 410 (480)
+ ...+...++...+ ..+.+++..++..++.+.+.+.|.+ .|+++. +|..+.+++...|....
T Consensus 238 ------------~--~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~--~g~~~~-~~~g~~~~~~~~~~~~~ 300 (350)
T TIGR03537 238 ------------A--SPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNK--VGLEYL-YPDATFYLWVKVPSGID 300 (350)
T ss_pred ------------C--CCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--CCCccc-CCCeEEEEEEECCCCCC
Confidence 0 0111111111222 2345566777788888899999998 477764 66666655443332211
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.|.++|+.+.....+.. ..+++|+++. .+++++++.++.++++
T Consensus 301 --------------~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~~ 350 (350)
T TIGR03537 301 --------------AKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWERV 350 (350)
T ss_pred --------------HHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhcC
Confidence 23567788888855443322211 1479999943 4789999999988753
No 103
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-21 Score=192.80 Aligned_cols=296 Identities=13% Similarity=0.119 Sum_probs=192.9
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.++.++++|+|+|+|+..++.++.. +|+ .|+++.+.|..+...+...|. +
T Consensus 69 ~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~--------------~gd-~vl~~~p~y~~~~~~~~~~g~---~ 130 (380)
T PRK06225 69 PELRELILKDLGLDDDEALITAGATESLYLVMRAFLS--------------PGD-NAVTPDPGYLIIDNFASRFGA---E 130 (380)
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCCCcchHHHHHHhCc---e
Confidence 4567888999999888999999999999999887643 445 688888888888888888888 7
Q ss_pred eEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccc
Q psy12303 195 CVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 195 v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
++.+|++. ++.+|++++++.+++. +++|++++++||+|.+.+ +++|.++|+++|+++++|++|+.+..
T Consensus 131 ~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 204 (380)
T PRK06225 131 VIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR 204 (380)
T ss_pred EEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc
Confidence 88888742 4689999999988754 789999999999999754 89999999999999999999975432
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
.... .........+++.+++|+++.| ..+|+++.+ +...+....... . .+ +....
T Consensus 205 ~~~~----~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~~~~~~~~----~------------~~---~~~~~ 260 (380)
T PRK06225 205 EHTL----AAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIEVVKSIVI----N------------DL---GTNVI 260 (380)
T ss_pred cCCc----hhhcCCCCEEEEeechhhcCCccceeEEEecC-HHHHHHHHHHHh----c------------cc---CCCHH
Confidence 1110 0000013345666889999743 558999874 444443221100 0 00 00001
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec-CCceeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL-EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
....+...+.. ..+.+++..+...++.+.+.+.|++ ++++.+.. ++..+.+.+.+.+.... ..
T Consensus 261 ~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~~ 324 (380)
T PRK06225 261 AQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDE-IEGVFLPVYPSHGNMMVIDISEAGID--------------PE 324 (380)
T ss_pred HHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-CcCCccccCCCCCeEEEEEcccccCC--------------HH
Confidence 11112222222 2233444555566677888888988 77764422 33333333332221111 23
Q ss_pred HHHHHHHhcccEEEeeeee----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 427 ILKGRMMQAGTMMVGYQPL----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~~~----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++.+.|.+.|+. +.++.. .+ .+++|+++ . .++++++++++.|++++++
T Consensus 325 ~l~~~l~~~gi~-v~~g~~~~~~~~-~~~iR~s~-~--~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 325 DLVEYLLERKIF-VRQGTYTSKRFG-DRYIRVSF-S--IPREQVEVFCEEFPDVVET 376 (380)
T ss_pred HHHHHHHHCCEE-EcCCcccCcCCC-CceEEEEe-C--CCHHHHHHHHHHHHHHHHH
Confidence 566777778754 433221 12 46999994 3 3789999999999988764
No 104
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=2.5e-21 Score=194.74 Aligned_cols=321 Identities=13% Similarity=0.142 Sum_probs=213.0
Q ss_pred hhcChhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
|....+...+.+++++++.+.+| ++++++++|+|+++++..++.+..+ ||+ .|+++.++|+
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~--------------pGd-~Vlv~~P~Y~ 146 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE--------------PGD-AFLLPTPYYP 146 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC--------------CCC-EEEECCCCCC
Confidence 43344556788888888887766 4667899999999999888887754 556 8999999999
Q ss_pred hHHHHHH-HcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 180 SVRSCAA-VCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 180 s~~~~~~-~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
.+...+. ..|. +++.||++ +++.+|+++|++++++..+.+.++++|++++|+||||.+.+ +++|.++|++|
T Consensus 147 ~~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~ 223 (468)
T PLN02450 147 GFDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK 223 (468)
T ss_pred chHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC
Confidence 8888777 4677 78888875 45688999999999876556667999999999999999976 66788889999
Q ss_pred CcEEEeeccccccccccccccC--cccC-----CC--CCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRH--PRLT-----GI--ERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~--~~~~-----~~--~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
|+++++|++|+...+..+.+.. +... +. ..--++..+++|.++ .+..+|+++..+.......... ..+.
T Consensus 224 ~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~-~~~~ 302 (468)
T PLN02450 224 NIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKM-SSFG 302 (468)
T ss_pred CcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHH-hhcC
Confidence 9999999999975442211111 0110 00 011246679999997 5588999987655433322211 1110
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD-----EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-----~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
. ...+...++...+.. ..+++..++..+..+.+.+.|++ . |+.+ .+|..+
T Consensus 303 -~---------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~-~-gi~~-~~~~~g 357 (468)
T PLN02450 303 -L---------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEA-A-GIKC-LKSNAG 357 (468)
T ss_pred -C---------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcc-cCCCce
Confidence 0 111222222222211 24667778888889999999998 4 8876 467777
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.++|.-.+...... .+.. ..++.+.+.+ .|+ .+.++...+ ..+++|+++.. .++++++..+++|++
T Consensus 358 ~flwi~l~~~~~~~---~~~~-----~~~l~~~ll~~~gV-~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~ 426 (468)
T PLN02450 358 LFCWVDMRHLLKSN---TFEA-----EMELWKKIVYEVKL-NISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKS 426 (468)
T ss_pred EEEEEEchHhcCcC---CchH-----HHHHHHHHHHhCCE-EEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHH
Confidence 67664433222110 1111 1245566655 564 444433222 15799999543 368999999999988
Q ss_pred hhcc
Q psy12303 476 LGHD 479 (480)
Q Consensus 476 ~~~~ 479 (480)
++++
T Consensus 427 ~l~~ 430 (468)
T PLN02450 427 FVES 430 (468)
T ss_pred HHHh
Confidence 7643
No 105
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.90 E-value=1.2e-21 Score=194.85 Aligned_cols=300 Identities=15% Similarity=0.142 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++.+.+++++|.+ ..+++++|++||..++..++... +++ .|+.+...|.++..++...|.
T Consensus 90 ~~~~~Le~~la~~~g~~--~~l~~~sG~~an~~ai~~l~~~~------------~~~-~v~~~~~~h~s~~~~~~~~g~- 153 (402)
T TIGR01821 90 IPHVELEAELADLHGKE--SALVFTSGYVANDATLATLAKII------------PGC-VIFSDELNHASMIEGIRHSGA- 153 (402)
T ss_pred HHHHHHHHHHHHHhCCC--eEEEECchHHHHHHHHHHhhCCC------------CCC-EEEEcchHhHHHHHHHHHcCC-
Confidence 34456777799999965 37888889999999998876420 223 777777789999888888776
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++..++.+ |++++++.++... ...+++|+++++++++|.+.|+++|.++|++||+++++|+||+.+.+. +
T Consensus 154 --~~~~~~~~-----d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g-~ 223 (402)
T TIGR01821 154 --EKFIFRHN-----DVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYG-P 223 (402)
T ss_pred --eEEEECCC-----CHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccC-C
Confidence 55555443 7888988886431 124789999999999999999999999999999999999999965431 1
Q ss_pred cccC-cccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRH-PRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~-~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.... ....++ +.+|++..++.|.++.+. |+++ .+++..........+|.+.. ...+...
T Consensus 224 ~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~-~~~~~~~~l~~~~~~~~~t~----------------~~~~~~~ 284 (402)
T TIGR01821 224 RGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIA-ASRKLIDAIRSYAPGFIFTT----------------SLPPAIA 284 (402)
T ss_pred CCCccchhccCCCCCeEEEEechhhhccCC--ceee-cCHHHHHHHHHhCcCceecC----------------cCCHHHH
Confidence 1110 011122 246888889999998633 5544 44444443322222222110 0000122
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
.++.++++.+.. ...+.++..++++++.+.|++ .|++++ ++..+++.+.. +.. . ...++.
T Consensus 285 aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~i~~i~~-~~~-------~-------~a~~~~ 344 (402)
T TIGR01821 285 AGATASIRHLKE--SQDLRRAHQENVKRLKNLLEA--LGIPVI-PNPSHIVPVII-GDA-------A-------LCKKVS 344 (402)
T ss_pred HHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHH--cCCCcC-CCCCCEEEEEe-CCH-------H-------HHHHHH
Confidence 233334443321 244556667899999999998 477765 34445444422 110 0 124567
Q ss_pred HHHHhc-ccEEEeeeee----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 430 GRMMQA-GTMMVGYQPL----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 430 ~~l~~~-g~~~~~~~~~----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++|.++ | +++.+... .+ ..++|++ ++..+|++||++++++|+++.++
T Consensus 345 ~~L~~~~G-i~v~~~~~p~~~~g-~~~lRis-~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 345 DLLLNKHG-IYVQPINYPTVPRG-TERLRIT-PTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred HHHHhcCC-EEEEeECCCCCCCC-CceEEEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 777655 6 44443221 12 4689999 88999999999999999988765
No 106
>PLN02822 serine palmitoyltransferase
Probab=99.90 E-value=7.1e-21 Score=191.49 Aligned_cols=313 Identities=15% Similarity=0.110 Sum_probs=204.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
......++++.+++++|.+. .+++++|++ ++..++.+..+ +|+ .|++....|+++..++.+.|
T Consensus 152 ~~~~~~~Lee~La~~~~~~~-~i~~s~G~~-a~~sai~a~~~--------------~gd-~Ii~d~~~H~s~~~~~~ls~ 214 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPD-SILYSYGLS-TIFSVIPAFCK--------------KGD-IIVADEGVHWGIQNGLYLSR 214 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCC-EEEECCHHH-HHHHHHHHhCC--------------CCC-EEEEeCCccHHHHHHHHHcC
Confidence 35566677788999999764 577776665 67777776643 445 78899999999999998887
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC---CCcc-EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAK---GDIP-FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~---~~~~-~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
. ++++++.+ |.++++..+++.... ..++ ++|+++.+++++|.+.|+++|.++|++||+++++|++|+.
T Consensus 215 ~---~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~ 286 (481)
T PLN02822 215 S---TIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSF 286 (481)
T ss_pred C---eEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence 6 77888876 677888877654322 1224 7999999999999999999999999999999999999996
Q ss_pred ccccc-ccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 266 GLLLS-KKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 266 ~~~~~-~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
+.+-- ...-. ...++ ..+|+++.+++|.++. .| |+++ .++..++........|.+.....
T Consensus 287 gvlG~~G~G~~-e~~~v~~~~~dii~~s~sKalg~-~G-G~i~-g~~~ii~~~~~~~~~~~fsa~lP------------- 349 (481)
T PLN02822 287 GVLGKSGRGLS-EHFGVPIEKIDIITAAMGHALAT-EG-GFCT-GSARVVDHQRLSSSGYVFSASLP------------- 349 (481)
T ss_pred cccCCCCCChH-HHcCCCCCCCeEEEecchhhhhh-CC-eEEE-cCHHHHHHHHhcCCceeeccccC-------------
Confidence 65421 10000 12223 3679999999999984 22 5544 55555554332222232211000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
...+.++..+++.+ +...++.++.++++++|.+.|++ .+|+.+..++...++.+.+ +........+ .
T Consensus 350 ---p~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~spi~~l~l-~~~~~~~~~~---~--- 416 (481)
T PLN02822 350 ---PYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSD-IPGLSIGSNTLSPIVFLHL-EKSTGSAKED---L--- 416 (481)
T ss_pred ---HHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCCCEEEEEe-CCCcccccch---H---
Confidence 01112222344332 22356788999999999999999 7788875445444444443 2210000000 0
Q ss_pred hhhHHHHHHHH-hcccEEEeeeee--CC---cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 423 EITPILKGRMM-QAGTMMVGYQPL--ND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 423 ~~~~~i~~~l~-~~g~~~~~~~~~--~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....++.++|. ++|++ +.+... .+ .+..+|++ .+..+|++||++++++|++++++
T Consensus 417 ~~~~~~~~~Ll~e~GV~-v~~~~~~~~~~~~~~~~lRi~-is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 417 SLLEHIADRMLKEDSVL-VVVSKRSTLDKCRLPVGIRLF-VSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHhcCCEE-EEeeCCCCcCCCCCCCcEEEE-ECCCCCHHHHHHHHHHHHHHHHH
Confidence 01246778887 66744 443211 11 13479999 78889999999999999987654
No 107
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=5.7e-21 Score=188.86 Aligned_cols=310 Identities=10% Similarity=0.083 Sum_probs=204.3
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+..++.+.+++++.+.+|. ++. ++++|+|+++++..++.+..+ ||+ .|+++.++|
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~--------------~gd-~vlv~~P~y 125 (383)
T TIGR03540 61 HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVN--------------PGD-IVLVPDPGY 125 (383)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCC--------------CCC-EEEEeCCCC
Confidence 44554455678888888898888776 344 588999999999988877643 556 889999999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
+.+..+++.+|. +++.+|.++ ++.+|++++++++.+. +++|++++|+||||.+.+ +++|.++|++|
T Consensus 126 ~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~ 196 (383)
T TIGR03540 126 PVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAPLKFFKELVEFAKEY 196 (383)
T ss_pred cchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 999999999998 889999874 3568999999888654 889999999999999987 68899999999
Q ss_pred CcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
|+++++|++|+........... ..+.+.....+.+.|+.|.++.| ..+|+++. +++...........+...
T Consensus 197 ~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~------ 269 (383)
T TIGR03540 197 NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIAGLGKVKTNVDSG------ 269 (383)
T ss_pred CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHHHHHHHHHhcccC------
Confidence 9999999999865442111000 01111112346667899999643 56898874 455544332111100000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
........+...+.. +.+.+++..+...+.++.+.+.|++ . ++.+. +|..+.++|...+....
T Consensus 270 ------------~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~-~~~~~~~~~~~l~~~~~- 332 (383)
T TIGR03540 270 ------------VFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKK-I-GIDVE-KPKATFYVWVPVPEGYT- 332 (383)
T ss_pred ------------CChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHh-C-CCEec-CCCcceEEEEECCCCCC-
Confidence 000111122222222 3566677778888899999999999 4 88875 55566555544433211
Q ss_pred CchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 412 MPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
..++...+. +.|+.+.....+.. ..+++|+++. .++++++..++.|.+
T Consensus 333 -------------~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 333 -------------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT---VPDERLEEAVARIKK 382 (383)
T ss_pred -------------HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec---CCHHHHHHHHHHHhh
Confidence 235566664 45644443222221 1469999953 357888888887764
No 108
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=1.7e-21 Score=193.94 Aligned_cols=304 Identities=18% Similarity=0.170 Sum_probs=201.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
+..++.+++++++++++|.+ ..+++|+ |++++..++.++.+ ||+ .|++++.+|+++...+...
T Consensus 84 G~~~l~~~l~~~la~~~g~~-~~i~~ts-G~~a~~~~~~~l~~--------------~gd-~vi~~~~~~~~~~~~~~~~ 146 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTE-DAILYSS-CFDANGGLFETLLG--------------KED-AIISDALNHASIIDGVRLC 146 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCC-cEEEEcC-hHHHHHHHHHHhCC--------------CCC-EEEEEhhhhHHHHHHHHhc
Confidence 44677888999999999976 3455555 58888888766543 556 8889999999999999888
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|. +++.++. .|++++++.+++....+.++++|+..+..+++|.+.++++|.++|++||+|+++|++|+.+..
T Consensus 147 ~~---~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~ 218 (397)
T PRK06939 147 KA---KRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFV 218 (397)
T ss_pred CC---ceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCc
Confidence 87 5666654 489999999876433333588888888889999999999999999999999999999975433
Q ss_pred ccc-cccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 269 LSK-KYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 269 ~~~-~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
... .... ...++ +++|+++.|+||+++++ ..|+++.+ +..++.......++... ++..
T Consensus 219 ~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~-~~~~~~l~~~~~~~~~~-----------------~~~~ 278 (397)
T PRK06939 219 GENGRGTV-EHFGVMDRVDIITGTLGKALGGA-SGGYTAGR-KEVIDWLRQRSRPYLFS-----------------NSLA 278 (397)
T ss_pred CCCCCCHH-HHcCCCCCCcEEEEECHHHhCcc-CceEEEeC-HHHHHHHHHhCcccccc-----------------CCCC
Confidence 211 0001 11122 25789999999999654 56777754 44554433221122111 0000
Q ss_pred C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 347 N-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 347 ~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
. ...++..+++.+ +...++.++..++++++.+.|++ . ++++. ++....+.+.. +.. .+ .
T Consensus 279 ~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~~~~~~~~~-~~~------------~~--~ 338 (397)
T PRK06939 279 PAIVAASIKVLELL--EESDELRDRLWENARYFREGMTA-A-GFTLG-PGEHPIIPVML-GDA------------KL--A 338 (397)
T ss_pred HHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH-c-CCCcC-CCCCCEEEEEE-CCH------------HH--H
Confidence 1 122233334433 12246678888999999999998 4 67653 34444433321 111 00 2
Q ss_pred HHHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 426 PILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.++.+.|.++|+.+. ...+. ...+++|++ ++..+++++|++++++|++++++
T Consensus 339 ~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~-~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 339 QEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQ-MSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred HHHHHHHHHCCceEe-eeCCCCCCCCCceEEEE-ECCCCCHHHHHHHHHHHHHHHHH
Confidence 467788888885544 32221 114689999 77778999999999999988764
No 109
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.4e-21 Score=191.34 Aligned_cols=337 Identities=13% Similarity=0.095 Sum_probs=214.3
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+......|....+..++.+.+.+++++.+|. .++++++|+|+++|+..++.+..+ |
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~--------------~ 116 (402)
T PRK06107 51 IKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLE--------------A 116 (402)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcC--------------C
Confidence 345555544433344655556678888999999998887 457899999999999988876543 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
|+ .|+++.++|+.+...+...+. .++.++.+. ++.+|++++++++++. +++|++++++||||.+.+
T Consensus 117 gd-~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~ 186 (402)
T PRK06107 117 GD-EVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSRA 186 (402)
T ss_pred CC-EEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCHH
Confidence 55 788888888887777777765 566777653 4679999999988653 788999999999998876
Q ss_pred -hHHHHHHHHHc-CcEEEeeccccccccccccccC--cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 243 -IEEIADICQKY-NMWLHVDAAWGGGLLLSKKYRH--PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 243 -l~~I~~i~~~~-~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
+++|+++|++| ++++++|++|+...+....... ....+...--++..|++|.++ .+..+|+++. ++........
T Consensus 187 ~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~ 265 (402)
T PRK06107 187 ELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-PADLIAAINK 265 (402)
T ss_pred HHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-CHHHHHHHHH
Confidence 57778888998 9999999999865432111111 011111122355668899997 4467899875 4444443221
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
.. .+.. .....+...++...+ +...+++..+...+.++.+.+.|++ ++|+.+ .+|
T Consensus 266 ~~-~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~-~~p 322 (402)
T PRK06107 266 LQ-SQSS--------------------SCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA-IPGLSC-LVP 322 (402)
T ss_pred HH-Hhcc--------------------cCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCcc-cCC
Confidence 11 0000 001222333333333 3455677777888889999999988 778876 467
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH-HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM-MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..+.++|...+.-......... ... ...++...+ .+.|+++. ++...+..+++|+++. .+++++++.++.|.
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~l~~~~gv~v~-pg~~Fg~~~~iRis~~---~~~e~l~~~l~~l~ 395 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGK--VLE-TDQDVVLYLLDSAGVAVV-QGTAYGLSPYFRLSIA---TSLETLEEACARIE 395 (402)
T ss_pred CcceEEeeeccccccccccccc--CCC-CHHHHHHHHHHhCCEEEe-CccccCCCCeEEEEeC---CCHHHHHHHHHHHH
Confidence 7777666433210000000000 000 012444444 45675444 4444444679999955 36999999999999
Q ss_pred HhhccC
Q psy12303 475 RLGHDL 480 (480)
Q Consensus 475 ~~~~~l 480 (480)
+.++++
T Consensus 396 ~~l~~~ 401 (402)
T PRK06107 396 RAVAAL 401 (402)
T ss_pred HHHHhc
Confidence 887653
No 110
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.6e-21 Score=188.22 Aligned_cols=325 Identities=12% Similarity=0.112 Sum_probs=213.5
Q ss_pred HHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCC
Q psy12303 86 VSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLS 163 (480)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~ 163 (480)
+.++.+.+....+ ....|....+...+.+.+++++.+..|. +++++++|+|+++|+..++.+...
T Consensus 45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~------------ 111 (384)
T PRK06348 45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILD------------ 111 (384)
T ss_pred HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcC------------
Confidence 4444444443322 2344555555667888888888877664 668999999999999999887754
Q ss_pred ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 164 AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 164 ~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
||+ .|+++.++|+.+..++..+|. +++.+|.+ +++.+|+++|++++++. +++|++++++||||.+.
T Consensus 112 --~gd-~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 179 (384)
T PRK06348 112 --PGD-EVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVF 179 (384)
T ss_pred --CCC-EEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCC
Confidence 556 788999999999999999987 77788864 34679999999988654 78888899999999997
Q ss_pred C---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 242 P---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 242 ~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
+ +++|.++|+++|+++++|++|+.............+.+...-.+++.|++|.++ .+..+|+++.. +........
T Consensus 180 s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~~~~~~ 258 (384)
T PRK06348 180 SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYIIETAKI 258 (384)
T ss_pred CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHHHHHHHH
Confidence 6 788888899999999999999987542211110012222233466779999998 55789998864 444333221
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
........ ...+...++...+ ..+..++..+...+.++++.+.|++ ++++++ .+|
T Consensus 259 ~~~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~-~~~~~~-~~p 315 (384)
T PRK06348 259 INEGICFS---------------------APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES-IPNLSL-HPP 315 (384)
T ss_pred HHHhccCC---------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCcee-ccC
Confidence 11000000 1112222222222 2344566677777888889999998 778776 467
Q ss_pred ceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 396 ~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
+.+.++|.-.+. ... ..++.+.+.+ .|+.+.....+.. ..+++|+++ . .++++++..+++
T Consensus 316 ~gg~~~~~~~~~~~~~--------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~-~--~~~~~l~~al~~ 378 (384)
T PRK06348 316 KGSIYAFINIKKTGLS--------------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC-T--VGIEVLEEAFNR 378 (384)
T ss_pred CeeEEEEEecccCCCC--------------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe-c--CCHHHHHHHHHH
Confidence 777766543331 111 2345666654 5654443222221 147999994 3 478999999999
Q ss_pred HHHh
Q psy12303 473 MDRL 476 (480)
Q Consensus 473 l~~~ 476 (480)
|+++
T Consensus 379 l~~~ 382 (384)
T PRK06348 379 IEKM 382 (384)
T ss_pred HHhh
Confidence 8765
No 111
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=1.8e-21 Score=193.98 Aligned_cols=299 Identities=16% Similarity=0.178 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
-.++.+.+++++|.+. .+++++|++||..++..+... .||+ +|+++...|.++..++...|.
T Consensus 93 ~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i~~l~~~------------~~g~-~vi~~~~~h~s~~~~~~~~g~--- 154 (410)
T PRK13392 93 HVLLERELADLHGKES--ALLFTSGYVSNDAALSTLGKL------------LPGC-VILSDALNHASMIEGIRRSGA--- 154 (410)
T ss_pred HHHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHHhcC------------CCCC-EEEEehhhhHHHHHHHHHcCC---
Confidence 3466777999999743 566667789999888755321 1445 788888899999888888776
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++..++.+ |.+.+++.++... ..++++|++++++|++|.+.|+++|.++|++||+++++|+||+.+.+.....
T Consensus 155 ~~~~~~~~-----d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~ 227 (410)
T PRK13392 155 EKQVFRHN-----DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGG 227 (410)
T ss_pred eEEEEeCC-----CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCC
Confidence 56666543 6677777776432 2348899999999999999999999999999999999999999654311100
Q ss_pred cCcccCC-CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTG-IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~-~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
......+ .+.+|+++.+++|+++.+. |++. .+++..........+|..... .......++
T Consensus 228 g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~-~~~~~~~~l~~~~~~~~~s~~----------------~~~~~~~a~ 288 (410)
T PRK13392 228 GIAERDGLMDRIDMIQGTLAKAFGCLG--GYIA-ASADLIDFVRSFAPGFIFTTA----------------LPPAVAAGA 288 (410)
T ss_pred chhhhccCCCCCcEEEEEChHhhhccc--chhh-cCHHHHHHHHHhCcchhccCc----------------CCHHHHHHH
Confidence 0001111 2357888889999998743 5554 455555443322223221110 000112233
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
..+|+.+ +......++..++++++.+.|++ .|+++. ++..+++.+.. +.. . ...++.++|
T Consensus 289 ~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~~~~i~~-~~~------------~--~~~~~~~~L 348 (410)
T PRK13392 289 TAAIRHL--KTSQTERDAHQDRVAALKAKLNA--NGIPVM-PSPSHIVPVMV-GDP------------T--LCKAISDRL 348 (410)
T ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH--cCCCCC-CCCCCEEEEEe-CCH------------H--HHHHHHHHH
Confidence 3444432 22334557778889999999998 488764 45555443322 110 0 023577777
Q ss_pred H-hcccEEEeeeee----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 433 M-QAGTMMVGYQPL----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 433 ~-~~g~~~~~~~~~----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. +.|+ ++.+... .+ ..++|++ ++..+|++|+++++++|+++.++
T Consensus 349 ~~~~GI-~v~~~~~p~~~~~-~~~lRis-~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 349 MSEHGI-YIQPINYPTVPRG-TERLRIT-PTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred HHhCCE-EEeeeCCCCCCCC-CceEEEE-ECCCCCHHHHHHHHHHHHHHHHH
Confidence 6 4574 4443221 12 4689999 88899999999999999988664
No 112
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=2.8e-21 Score=190.79 Aligned_cols=321 Identities=9% Similarity=0.031 Sum_probs=209.4
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC---CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ---GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~---~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
+.+...+......|....+...+.+.+++++++++|.+ +.++++|+|+++++..++.+..+ ||
T Consensus 49 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~--------------~g 114 (384)
T PRK12414 49 EGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVH--------------PG 114 (384)
T ss_pred HHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcC--------------CC
Confidence 44443332222446555667888899999999999974 25799999999999888877643 55
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc---Ch
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PI 243 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l 243 (480)
+ .|+++.++|..+...++..|. +++.+|.++ ++.+|+++|++++++. +++|++++++||||.+. ++
T Consensus 115 d-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~~~ 184 (384)
T PRK12414 115 D-EVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPEDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAADL 184 (384)
T ss_pred C-EEEEeCCCccchHHHHHHcCC---EEEEEecCccccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHHHH
Confidence 6 788889999998888888887 788899874 5789999999988654 88999999999999984 58
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
++|.++|++||+++++|++|....+....... ..+....+--+++.|++|.++ .+..+|+++..+ .......... .
T Consensus 185 ~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~~l~~~~-~ 262 (384)
T PRK12414 185 ARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMDEIRKVH-Q 262 (384)
T ss_pred HHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHHHHHHHH-h
Confidence 88999999999999999999875442111100 011111123467789999997 447789988654 4433322111 0
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNV 400 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v 400 (480)
+. ......+...++...+. ...+.+..+...+.++.+.+.|++ . |+.+. +|..+.+
T Consensus 263 ~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~-~~~gg~~ 319 (384)
T PRK12414 263 FM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG-S-RFELL-PSEGSFF 319 (384)
T ss_pred he--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh-C-CCeec-CCCcceE
Confidence 00 00012223333333331 123345566777888899999998 4 77764 5666666
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHH-HHHHhcccEEEeeeeeC--Cc-ccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILK-GRMMQAGTMMVGYQPLN--DL-PNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~-~~l~~~g~~~~~~~~~~--~~-~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.|.-.+..... . ..++. ..+.+.|+.++....+. +. .+++|+++. .+++++++.+++|.+
T Consensus 320 ~~~~~~~~~~~-~-----------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 320 MLARFRHFSDE-S-----------DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS---KDDATLVEGARRLCS 383 (384)
T ss_pred EEEcccccCCC-C-----------HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence 55322211000 0 12233 44556776555433231 21 469999954 258999999988875
No 113
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2e-22 Score=196.30 Aligned_cols=286 Identities=11% Similarity=0.074 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++.+|++++++++|+|+++++..++.+... ||+..|+++.++|+.+...++..|+ +
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~--------------~g~~~vli~~P~y~~y~~~~~~~G~---~ 122 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE--------------PGKDAILYCPPTYGMYSVSAETIGV---E 122 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--------------CCCCEEEEcCCCHHHHHHHHHHcCC---E
Confidence 4678889999999989999999999999988877643 4423788999999999999999998 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeecccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~ 272 (480)
++.+|.++++.+|++++++++ +. +++|++++|+||||.+.+.+++.++++.. +.++++|++|..+......
T Consensus 123 ~~~v~~~~~~~~d~~~l~~~~-~~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~ 195 (351)
T PRK01688 123 IRTVPTLDNWQLDLPAIADNL-DG------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASL 195 (351)
T ss_pred EEEeecCCCCCCCHHHHHHhc-cC------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCCh
Confidence 889999888999999998877 23 78999999999999999888877777542 6899999999776421110
Q ss_pred ccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
.. .+... .--++.-|++|+++. +..+|+++. +++.+........+|- ...+.
T Consensus 196 ~~--~~~~~-~n~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~~-----------------------v~~~~ 248 (351)
T PRK01688 196 AG--WLAEY-PHLVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPYP-----------------------LSTPV 248 (351)
T ss_pred HH--HHhhC-CCEEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCCC-----------------------CCHHH
Confidence 00 11111 112556699999874 366788885 4555544432222221 11112
Q ss_pred HHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 352 LWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 352 ~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
..++...+ +.+.+++.++...+.++++.+.|++ +++++.+.++..+.+.+.+ + . ..++
T Consensus 249 ~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~ps~~nfi~~~~-~-~----------------~~~l 309 (351)
T PRK01688 249 ADIAAQALSPQGIAAMRERVAEINANRQWLIAALKE-IPCVEQVFDSETNYILARF-T-A----------------SSAV 309 (351)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCeECCCCCcEEEEEc-C-C----------------HHHH
Confidence 22222222 2355677777778888999999998 7787544455444333322 1 1 1356
Q ss_pred HHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 429 KGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.+.|.++|+.+.......+..+++|+++. +++++++++++|+
T Consensus 310 ~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 310 FKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred HHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 78888888665544333333579999943 6899999999873
No 114
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.90 E-value=4.2e-21 Score=178.12 Aligned_cols=389 Identities=17% Similarity=0.167 Sum_probs=251.8
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHH---HHcCcCCcch-hcChhhHHHHHHHH
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLI---ATANTNMFTY-EIAPVFILMETVVL 118 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~-~~~~~~~~~e~~~~ 118 (480)
+..+|....+.-++++.+.++-+.+....+. ++-..++.......+.+... .+.+..++.. +...+..++-.++.
T Consensus 37 r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~-m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq 115 (496)
T COG1003 37 RRYPPLPEHSETEMVRHYTRLSQKDLAVDRG-MIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQ 115 (496)
T ss_pred hcCCCCccccHHHHHHHHHHHHhcccccccC-ccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHH
Confidence 3444554457778888887766554433222 22222333333333332222 2344444444 34577788899999
Q ss_pred HHHHHHhCCCCCCeEEC-CChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEE
Q psy12303 119 EKMRQIIGWQGGDSILA-PGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVE 197 (480)
Q Consensus 119 ~~la~~~g~~~~~~~~t-~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~ 197 (480)
+||+++.|++. +.+. +.|+.+=+.+|++.|.. ...+|... +.+|++++.+|...-..+.+.|. +|+.
T Consensus 116 ~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~Y----He~rG~~~---R~~~LIP~SAHGTNPASAam~G~---~VV~ 183 (496)
T COG1003 116 EWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAY----HESRGEGH---RNICLIPDSAHGTNPASAAMAGF---KVVV 183 (496)
T ss_pred HHHHHhcCCce--eeccCCCCcchhhHHHHHHHHH----HHHcCCCc---CcEEEeeccccCCChhhHhhcCc---eEEE
Confidence 99999999987 5544 45667777777777764 23344422 44999999999999999999999 8999
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeecccccccc-ccccccC
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLL-LSKKYRH 275 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~~~~~~ 275 (480)
|+++++|.+|+++|++++.++ ++++.+|+|+| .|.+ .++.+|++|.+++|..+..|||.--..+ .....+.
T Consensus 184 V~~~~~G~VDlddLk~k~~~~------~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~ 256 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDN------LAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM 256 (496)
T ss_pred EecCCCCCccHHHHHHHhccc------eeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccccccc
Confidence 999999999999999999976 99999999955 7988 5799999999999999999998765544 1112233
Q ss_pred cccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccc-----ccccCcccCCCCccccCCCC----
Q psy12303 276 PRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQ-----DKLYDVRYDTGDKVIQCGRH---- 346 (480)
Q Consensus 276 ~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~r~---- 346 (480)
++|++-+++||+++.|.|.|.--+..-..... ..+|+... ...+....+.. +++.-+..
T Consensus 257 -------G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~----L~pfLP~p~~~~~~~~y~~~~~~~-~s~g~~~a~~Gs 324 (496)
T COG1003 257 -------GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH----LAPFLPGPVVYHDVGEYRLDYDGK-KSIGVSAAPYGS 324 (496)
T ss_pred -------ccceEEeecccccccCCCCCCCCCCceehHhh----ccccCCCCcccCCCccccccCCCC-ccceeeccccCc
Confidence 89999999999998886544322222111111 12333221 11111111111 11111111
Q ss_pred -CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 347 -NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 347 -~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
.-....|+.++.+|.+|+++.-+...-+++|+...|+. .+++.-.+. ...+++...|-. +...
T Consensus 325 ~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~y~~~~~~~HE~ild~r~l~----------~~~G 391 (496)
T COG1003 325 ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG---YYPVPYTGENRVAHECILDARPLK----------KETG 391 (496)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh---cCccccCCCCcceeEEEeechHhH----------hhcC
Confidence 13357899999999999999999999999999999987 344432232 223333221110 1111
Q ss_pred hhhHHHHHHHHhcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 423 EITPILKGRMMQAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
--..++.++|++-|.- .++...- ..+.+-+- +...-+++++|++++++.++.++
T Consensus 392 v~~~DvAKrLlD~GfH--aPT~~FPliV~~tLMIE-PTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 392 VRALDVAKRLLDYGFH--APTMYFPLIVAGTLMIE-PTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred CcHHHHHHHHHhcCCC--CCcccCccccccceeec-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 1135788999999842 2221111 13456666 77778999999999999988764
No 115
>KOG0259|consensus
Probab=99.90 E-value=6.9e-21 Score=173.60 Aligned_cols=351 Identities=13% Similarity=0.069 Sum_probs=230.7
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~ 148 (480)
++|.-+..+.+...... ....+........|..+.+...-.+++++++-+-+.. .++++++|+|.++|+.+++.+
T Consensus 69 GDPsv~~~~~ts~~a~~---Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~ 145 (447)
T KOG0259|consen 69 GDPSVYPCFRTSQEAEQ---AVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS 145 (447)
T ss_pred CCCCccccccCCHHHHH---HHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH
Confidence 34555544444432222 2233333344456666666555555544443332322 347899999999999999998
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.+ ||. .|+++.+.++-+..-+...|+ +|++... +.++++|++.+|+.++++ |+
T Consensus 146 LA~--------------p~a-NILlPrPGfp~Y~~~a~~~~l---EVR~ydlLPe~~weIDL~~veal~DEN------T~ 201 (447)
T KOG0259|consen 146 LAN--------------PGA-NILLPRPGFPLYDTRAIYSGL---EVRYYDLLPEKDWEIDLDGVEALADEN------TV 201 (447)
T ss_pred hcC--------------CCC-ceecCCCCCchHHHhhhhcCc---eeEeecccCcccceechHHHHHhhccC------ee
Confidence 865 544 899999999988888899999 7777665 457999999999999998 99
Q ss_pred EEEeccCCCcccccc---ChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccce-eCccccCCCc-ccc
Q psy12303 227 FVNCTSGTTVLGAFD---PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVT-WNPHKLMGTL-LQC 301 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~---~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~-~s~hK~~~~p-~~~ 301 (480)
++++.+|+||+|.+. .|++|+++|+++|+.++.|++|+-..+....+-. .-.-.+.+-+++ .+..|-..+| +..
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp-mg~fssiVPVitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP-MGKFSSIVPVITLGGISKRWIVPGWRL 280 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc-hhhccccCceEeecccccccccCCcee
Confidence 999999999999984 4999999999999999999999987663322111 111011233333 3556766666 789
Q ss_pred eEEEEeCchh-hHhhhc--CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy12303 302 STIHFKQDGL-LISCNQ--MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYM 378 (480)
Q Consensus 302 g~~~~~~~~~-~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l 378 (480)
||+.+.|..- +..... ....++.- ..++ -++ --.|+ =..|..-.++.+...+.-...+++..
T Consensus 281 GWi~~hD~~gvf~~~~~~q~~~~~~~~-------~~~p--~Ti----iQ~Al--P~IL~kTp~efF~k~~~~lk~na~l~ 345 (447)
T KOG0259|consen 281 GWIALHDPRGVFRDTKVVQGIKNFLDI-------IPGP--ATI----IQGAL--PDILEKTPEEFFDKKLSFLKSNADLC 345 (447)
T ss_pred eeEEEecccccccchHHHHHHHHHHhc-------cCCc--cHh----HHHHh--HHHHHhChHHHHHHHHHHHHhhHHHH
Confidence 9999988731 111000 00000000 0000 000 00111 12233335677888888899999999
Q ss_pred HHHHhcCCCCeEEecCCceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecc
Q psy12303 379 VKKIKSMPDKFYLILEPEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIIS 457 (480)
Q Consensus 379 ~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~ 457 (480)
.+.|++ +|++.....|.+.++.+.-..-. +.+. .+ ..++.++|.++.++++-++...+.++|+|+++
T Consensus 346 y~~Lk~-IP~l~cp~kPeg~mylmv~l~~s~~~~~-----~d-----D~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i- 413 (447)
T KOG0259|consen 346 YSRLKD-IPCLTCPVKPEGCMYLMVKLNLSLFPDI-----ED-----DVDFCQKLAREESVICLPGQAFGLKNWLRIVI- 413 (447)
T ss_pred HHHHhc-CCCcccCcCCCcceEEEeccchhhhccc-----cc-----cHHHHHHHhhhcceEEeccccccCCCeEEEEE-
Confidence 999999 99999777899888876433211 1111 11 12466777777777776666666689999993
Q ss_pred cCCCCHHHHHHHHHHHHHhhc
Q psy12303 458 SAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 458 ~~~~t~~di~~~~~~l~~~~~ 478 (480)
....+.+++.+++|++...
T Consensus 414 --~~~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 414 --TVEEEMLEEAFSRIKEFCD 432 (447)
T ss_pred --ccChHHHHHHHHHHHHHHH
Confidence 4578999999999998764
No 116
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.90 E-value=1.4e-20 Score=187.00 Aligned_cols=330 Identities=15% Similarity=0.080 Sum_probs=207.1
Q ss_pred HHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...+... ...|....+...+.+.+.+++....|. ++.++++|+|+|+|+..++.+...
T Consensus 53 ~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~-------------- 118 (403)
T TIGR01265 53 AEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALAN-------------- 118 (403)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCC--------------
Confidence 334444443322 223444444445555555555443333 457899999999999999988753
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
+|+ .|+++.++|+.+...+...|+ +++.++.+. ++.+|++++++++.++ +++|++++++||+|.+.+
T Consensus 119 ~gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~ 188 (403)
T TIGR01265 119 PGA-NILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEK------TVAIVVINPSNPCGSVFSR 188 (403)
T ss_pred CCC-EEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcC------ccEEEEecCCCCCCCCCCH
Confidence 445 788888999988888888887 777777743 5789999999988654 789999999999999965
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC-CC-ccceeCccccCCCc-ccceEEEEeCc-h-----h
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE-RA-DSVTWNPHKLMGTL-LQCSTIHFKQD-G-----L 311 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~~-D~~~~s~hK~~~~p-~~~g~~~~~~~-~-----~ 311 (480)
+++|.++|+++|+++++|++|+......+... .+..+. .. -+++.|++|.++.| ..+|++++.++ . .
T Consensus 189 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~ 266 (403)
T TIGR01265 189 DHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFI--PMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTV 266 (403)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCcc--chhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHH
Confidence 89999999999999999999987654221110 111111 11 24566999986544 78999987643 2 1
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
+........... . ...+....+...+.......+++..++..+.++++.+.|++ .+++.+
T Consensus 267 ~~~~~~~~~~~~-~------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~ 326 (403)
T TIGR01265 267 LQGLKNLLQRIL-G------------------PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD-IPGLVC 326 (403)
T ss_pred HHHHHHHhhhhc-C------------------CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCCcee
Confidence 111111000000 0 00011112222232222455677788888889999999998 778875
Q ss_pred ecCCceeEEEEEeecCcc-CCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRV-RNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~ 469 (480)
. .|..+.+++...+... .+. .+ ..++...+. +.|+.+. ++...+..+++|+++. ..++.+++.
T Consensus 327 ~-~p~~g~f~~~~~~~~~~~~~--------~~--~~~~~~~l~~~~gv~v~-pg~~f~~~~~iRis~~---~~~~~l~~~ 391 (403)
T TIGR01265 327 P-KPEGAMYLMVKLELELFPEI--------KD--DVDFCEKLVREESVICL-PGSAFGLPNWVRITIT---VPESMLEEA 391 (403)
T ss_pred c-CCCceeEEEEeccccccCCC--------CC--HHHHHHHHHHhCCEEEe-CccccCCCCeEEEEec---CCHHHHHHH
Confidence 3 4666666554333211 000 00 234556654 5665444 3333333689999954 257889999
Q ss_pred HHHHHHhhcc
Q psy12303 470 LTEMDRLGHD 479 (480)
Q Consensus 470 ~~~l~~~~~~ 479 (480)
+++|.+++++
T Consensus 392 l~~l~~~~~~ 401 (403)
T TIGR01265 392 CSRIKEFCER 401 (403)
T ss_pred HHHHHHHHHh
Confidence 9999887754
No 117
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.90 E-value=9.8e-21 Score=187.66 Aligned_cols=328 Identities=9% Similarity=0.034 Sum_probs=208.1
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
+..+.........+.....|....+..++.+++++|+.+.+|. ++. .+++|+|+++|+..++.+..+
T Consensus 50 p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~---------- 119 (394)
T PRK05942 50 PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVN---------- 119 (394)
T ss_pred CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCC----------
Confidence 3334434444333332345655556678888999999888775 454 488899999999988877643
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
||+ .|+++.++|+.+...+...|. +++.+|.+. ++.+|++++++.+.+. +++|++++|+||||.
T Consensus 120 ----~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~ 185 (394)
T PRK05942 120 ----PGD-VVLVPSPAYPAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTA 185 (394)
T ss_pred ----CCC-EEEEcCCCCcchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCC
Confidence 556 888999999998888888887 888898874 3579999999988654 899999999999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHh
Q psy12303 240 FDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLIS 314 (480)
Q Consensus 240 ~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~ 314 (480)
+.+ +++|.++|+++|+++++|++|+.+......... ..+.+.....+.+.|+.|.++ .+..+|+++. ++.....
T Consensus 186 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~ 264 (394)
T PRK05942 186 TAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQG 264 (394)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHHH
Confidence 987 788999999999999999999876542111000 011111233456678899886 4467899985 4455444
Q ss_pred hhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 315 CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
......... .+..+ .....+...++ ...+.+++..++..++.+++.+.|.+ . ++.+. +
T Consensus 265 l~~~~~~~~------------~~~~~------~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~-~ 322 (394)
T PRK05942 265 LRTLKTNLD------------YGIFS------ALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGE-L-GWNIP-P 322 (394)
T ss_pred HHHHHhhcc------------cCCCH------HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeec-C
Confidence 332111000 00000 11112222222 23456677778888889999999988 4 78764 5
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH-HHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR-MMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
|..+.+.|.-.+.... ..++..+ +.+.|+.+.....+.. ..+++|+++. .+.+.+...++.
T Consensus 323 ~~~~~f~~~~~~~~~~--------------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~ 385 (394)
T PRK05942 323 TKATMYLWVPCPVGMG--------------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---ADCDRLGEALDR 385 (394)
T ss_pred CCeeeEEEEECCCCCC--------------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHH
Confidence 6666555543332211 1233343 4456754443322221 1579999953 345666666666
Q ss_pred HHHh
Q psy12303 473 MDRL 476 (480)
Q Consensus 473 l~~~ 476 (480)
|.+.
T Consensus 386 l~~~ 389 (394)
T PRK05942 386 LKQA 389 (394)
T ss_pred HHHh
Confidence 6543
No 118
>PRK08068 transaminase; Reviewed
Probab=99.90 E-value=9.3e-21 Score=187.57 Aligned_cols=318 Identities=11% Similarity=0.035 Sum_probs=209.7
Q ss_pred HHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 90 GEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 90 ~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+...++. ....|...++..++.+++++++.+.+|. +++ ++++|+|+++++..++.+...
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~-------------- 116 (389)
T PRK08068 51 VEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMN-------------- 116 (389)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCC--------------
Confidence 3444444332 2234544566778888888888777774 555 799999999999887776543
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI 243 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l 243 (480)
||+ .|+++.++|+.+..+++..|. +++.+|+++ ++.+|++++++.+++. +++|++++|+||||.+.+.
T Consensus 117 ~gd-~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~s~ 186 (389)
T PRK08068 117 PGD-TILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVATK 186 (389)
T ss_pred CCC-EEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcCCH
Confidence 445 788999999999999999998 888999875 3678999999888654 8899999999999999775
Q ss_pred ---HHHHHHHHHcCcEEEeeccccccccccccccCcccC--CCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 244 ---EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLT--GIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 244 ---~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
++|.++|++|++++++|++|+........ ..+... +.....+++.|++|.++ .+..+|+++. +++.+.....
T Consensus 187 ~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~-~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~ 264 (389)
T PRK08068 187 AFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK-PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINL 264 (389)
T ss_pred HHHHHHHHHHHHcCeEEEEehhhhhhccCCCC-CcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHHH
Confidence 67788899999999999999765432111 010111 11123466779999996 4467899884 5555544322
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
....+... .......++...+ +.+.++..+++..+.++++.+.|++ . |+.+ .+|
T Consensus 265 ~~~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-g~~~-~~~ 320 (389)
T PRK08068 265 LQDHLFVS---------------------LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE-I-GWEV-DAP 320 (389)
T ss_pred HHhhccCC---------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc-cCC
Confidence 21111100 0111111122222 3456677888888899999999988 4 7765 466
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCc--ccEEEEecccCCCCHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDL--PNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
..+.+++...+.... ..++.+.|.+ .|+. +.++...+. .+++|+++. ..++.+...++.
T Consensus 321 ~g~~~~~v~~~~~~~--------------~~~~~~~l~~~~gi~-v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~ 382 (389)
T PRK08068 321 KGSFFAWMPVPKGYT--------------SEQFADLLLEKAHVA-VAPGNGFGEHGEGYVRVGLL---TDEERLREAVER 382 (389)
T ss_pred CeeEEEEEECCCCCC--------------HHHHHHHHHHhCCEE-EecchHhCccCCCeEEEEEc---CCHHHHHHHHHH
Confidence 776665543332211 2456677775 4754 444322221 479999953 356777777777
Q ss_pred HHH
Q psy12303 473 MDR 475 (480)
Q Consensus 473 l~~ 475 (480)
|++
T Consensus 383 l~~ 385 (389)
T PRK08068 383 IGK 385 (389)
T ss_pred HHH
Confidence 765
No 119
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=191.46 Aligned_cols=326 Identities=14% Similarity=0.056 Sum_probs=206.9
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcC--c---------------hhHhcCCCccCC
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMF--P---------------TYKEKGLSAIKG 167 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~--~---------------~~~~~g~~~~~g 167 (480)
.......++|....+.+.++||++..++. .-||+.||+.++.+...... | +-++.......|
T Consensus 88 ~g~~~~d~ie~l~~~ra~~lf~a~~anvq-p~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~g 166 (493)
T PRK13580 88 AGCQNVDTVEWEAAEHAKELFGAEHAYVQ-PHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGN 166 (493)
T ss_pred CCCchHHHHHHHHHHHHHHHhCCCccccc-CCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCC
Confidence 34566688999999999999999875544 44678899999988875310 0 000001101113
Q ss_pred ceEEEecCC---CchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh
Q psy12303 168 QLVMFTSDQ---CHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI 243 (480)
Q Consensus 168 ~~~vl~~~~---~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l 243 (480)
+ .|+.-+. .|.++.......|... .++..++++ ++.+|.+++++.+++. +..|++++.++. |...|+
T Consensus 167 d-~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~~g~iD~d~l~~~~~~~------~plvii~g~S~~-~~~~dl 237 (493)
T PRK13580 167 Q-RLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPDTGLLDYDEIAALAREF------KPLILVAGYSAY-PRRVNF 237 (493)
T ss_pred C-EEEeecCCCCCeeecCcccchhhhee-eeEecccCcccCccCHHHHHHHHhhc------CCEEEEeCcccc-CCCcCH
Confidence 4 4443322 3444433334444322 455566664 6899999999999886 667777888777 557799
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
++|.++|+++|++++||+||+.|.+....... ......++|++++++||++++|.| |+++++ +.+....... .+++
T Consensus 238 ~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~-~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~-~~l~~~L~~a-~P~i 313 (493)
T PRK13580 238 AKLREIADEVGAVLMVDMAHFAGLVAGKVFTG-DEDPVPHADIVTTTTHKTLRGPRG-GLVLAK-KEYADAVDKG-CPLV 313 (493)
T ss_pred HHHHHHHHHcCCEEEEECchhhceeccccchh-hcCCCCCCcEEEeCChhhccCCCe-EEEEec-HHHHHHHhhC-CCcc
Confidence 99999999999999999999999887544321 112234799999999999987874 776665 4444443222 2444
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSF 402 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f 402 (480)
.+.... ....+...++..+....+.++.++..+++++|++.|.+ .|+.++.. ....++.+
T Consensus 314 ~gg~l~-----------------p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~--~G~~vv~ggTdshIV~V 374 (493)
T PRK13580 314 LGGPLP-----------------HVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLK--RGARLVTGGTDNHLVLI 374 (493)
T ss_pred cCCCcc-----------------HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHh--cCCCccCCCCCCCEEEE
Confidence 332110 11222233344332234567889999999999999998 69988632 34455555
Q ss_pred EeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEe---eeeeCC--cccEEEEecccC----CCCHHHHHHHHHHH
Q psy12303 403 WYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVG---YQPLND--LPNFFRNIISSA----AVTEGDIDFLLTEM 473 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~---~~~~~~--~~~~~R~~~~~~----~~t~~di~~~~~~l 473 (480)
...+.. .. ...+.+.|.+.|+++-. |+...+ ....+|++ .+. .++++||+++++.|
T Consensus 375 ~lg~~~------------~~--g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg-~~A~ttrg~teedi~~iad~l 439 (493)
T PRK13580 375 DVTSFG------------LT--GRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLG-TPALTTLGMGSDEMDEVAELI 439 (493)
T ss_pred EeCCHH------------HH--HHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEec-cchhhhcCCCHHHHHHHHHHH
Confidence 332111 00 13456688888854321 222112 14679999 655 45799999999999
Q ss_pred HHhhc
Q psy12303 474 DRLGH 478 (480)
Q Consensus 474 ~~~~~ 478 (480)
.++++
T Consensus 440 ~~~l~ 444 (493)
T PRK13580 440 VKVLS 444 (493)
T ss_pred HHHHH
Confidence 87764
No 120
>PRK08363 alanine aminotransferase; Validated
Probab=99.90 E-value=4.8e-21 Score=190.24 Aligned_cols=329 Identities=12% Similarity=0.070 Sum_probs=213.1
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+......|...++..++++.+.+++....| .+++++++|+|+++|+..++.+..+ |
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~--------------~ 116 (398)
T PRK08363 51 MKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLD--------------P 116 (398)
T ss_pred HHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCC--------------C
Confidence 33444444332223455566677888888888877766 4677899999999999988877743 5
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEe-eCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEV-PSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
|+ .|+++.++|+.+...+...|. .++.+ +.++ ++.+|+++|++++++. +++|++++++||||.+.+
T Consensus 117 gd-~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~ 186 (398)
T PRK08363 117 GD-EILIPGPSYPPYTGLVKFYGG---VPVEYRTIEEEGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEKK 186 (398)
T ss_pred CC-EEEEcCCCCcchHHHHHHcCC---EEEEeccccccCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCHH
Confidence 56 788999999999999998887 56666 4544 4579999999888654 789999999999999977
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCC--ccceeCccccCC-CcccceEEEEe-CchhhHhhhc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERA--DSVTWNPHKLMG-TLLQCSTIHFK-QDGLLISCNQ 317 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~--D~~~~s~hK~~~-~p~~~g~~~~~-~~~~~~~~~~ 317 (480)
+++|.++|+++|+++++|++|+...+..+. . ....+... -+++.|++|+++ .+.++|++++. ++........
T Consensus 187 ~~~~l~~~a~~~~~~li~Deay~~~~~~~~~--~-~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~ 263 (398)
T PRK08363 187 TLKEILDIAGEHDLPVISDEIYDLMTYEGKH--V-SPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVRE 263 (398)
T ss_pred HHHHHHHHHHHcCeEEEEhhhhhhhccCCcc--c-CHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHH
Confidence 889999999999999999999875432111 1 11111111 244669999954 45789999873 3333322111
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
....+. .. .+ + ...+...++...+ ..+.+++..++..+..+++.+.|++ ++++.+ .+|
T Consensus 264 ~~~~~~-~~-----------~~---~---~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~-~~p 323 (398)
T PRK08363 264 AIDKLA-RI-----------RL---C---PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE-IPGIST-TKP 323 (398)
T ss_pred HHHHHh-cc-----------cc---c---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCEe-cCC
Confidence 100000 00 00 0 1122222222222 3566777788888899999999998 788876 467
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHH-HHHHHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL-KGRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i-~~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
..+.+.|...+.... .+ ..++ ...|.+.|+.+.....+... .+++|+++. .++++++..++.|
T Consensus 324 ~g~~~~~~~l~~~~~-~~-----------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l 388 (398)
T PRK08363 324 QGAFYIFPRIEEGPW-KD-----------DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDRF 388 (398)
T ss_pred CeEEEEEEEeccCCC-CC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHH
Confidence 777776643332100 00 1123 34456777554443322221 479999953 3689999999999
Q ss_pred HHhhcc
Q psy12303 474 DRLGHD 479 (480)
Q Consensus 474 ~~~~~~ 479 (480)
++++++
T Consensus 389 ~~~~~~ 394 (398)
T PRK08363 389 EEFMRE 394 (398)
T ss_pred HHHHHH
Confidence 887653
No 121
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=2.5e-21 Score=193.51 Aligned_cols=308 Identities=15% Similarity=0.137 Sum_probs=195.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH---
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC--- 184 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~--- 184 (480)
+....+|+.+++++++++|.+...+++ ++||+|+..++.+... ||+ .|+++..+|.++...
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~al~~~l~~l~~--------------~gd-~Vl~~~~~~~~~~~~~~~ 130 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQANAAVYFALLK--------------PGD-TILGMDLAHGGHLTHGSP 130 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceeeec-CCchHHHHHHHHHhcC--------------CCC-EEEEeccccCCccccccc
Confidence 345667777788999999998755444 4678899888776643 556 788888888764321
Q ss_pred HHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 185 AAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
....+.+. +++.++.+. ++.+|++++++++++. +|++|+++. +.+|...|+++|.++|+++|+++++|+||
T Consensus 131 ~~~~~~g~-~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~ 202 (416)
T PRK00011 131 VNFSGKLY-NVVSYGVDEETGLIDYDEVEKLALEH-----KPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAH 202 (416)
T ss_pred ccccccee-eEeecCcCcccCCcCHHHHHHHHHhc-----CCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 11222222 677788874 5899999999999752 177887754 34677789999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+.+......... .+. ++|+++.|+||++.+|. .|+++++++............+...
T Consensus 203 ~~g~~~~g~~~~-~~~---~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------------ 259 (416)
T PRK00011 203 IAGLVAAGVHPS-PVP---HADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG------------------ 259 (416)
T ss_pred hhcccccCccCC-CCC---CCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC------------------
Confidence 866543221111 122 67999999999997654 4666665555554433221111100
Q ss_pred CCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCchhhHHHHh
Q psy12303 344 GRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMPHEKRLNIL 421 (480)
Q Consensus 344 ~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l 421 (480)
+... ...++..++.....+++++++++..++++++.+.|++ .|+++... +....+.+...+....
T Consensus 260 ~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~i~~~~~~~~----------- 326 (416)
T PRK00011 260 GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAE--RGFRVVSGGTDNHLVLVDLRSKGLT----------- 326 (416)
T ss_pred CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--CCCeeeecCCCCeEEEEeCcccCCC-----------
Confidence 0001 1222233333333456788899999999999999999 48887531 2223333332211110
Q ss_pred hhhhHHHHHHHHhcccEEEee-eee----CCcccEEEEecc---cCCCCHHHHHHHHHHHHHhhc
Q psy12303 422 GEITPILKGRMMQAGTMMVGY-QPL----NDLPNFFRNIIS---SAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 422 ~~~~~~i~~~l~~~g~~~~~~-~~~----~~~~~~~R~~~~---~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.+.|+.+... .+. ......+|++.. ....|++|++++++.|+++++
T Consensus 327 ---~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 327 ---GKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred ---HHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 135667777778553211 011 001356998621 135689999999999998754
No 122
>PRK07337 aminotransferase; Validated
Probab=99.90 E-value=4.9e-21 Score=189.61 Aligned_cols=322 Identities=14% Similarity=0.114 Sum_probs=210.1
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
.+.+...+......|....+..++++.+.+++.+.+|. +++++++|+|+++|+..++.+..+ +|
T Consensus 49 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~g 114 (388)
T PRK07337 49 VEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVE--------------RG 114 (388)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcC--------------CC
Confidence 34555544433445655556778888888888887775 667899999999999888876643 44
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
+ .|+++.++|+++...+...|. +++.+|.+. ++.+|++++++.+++. +++|++++++||||.+.+
T Consensus 115 d-~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~ 184 (388)
T PRK07337 115 D-EVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSNPTGTSIAPDE 184 (388)
T ss_pred C-EEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCCCCCcCcCHHH
Confidence 5 788999999999888888887 788899874 4689999999988764 789999999999999876
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccc-eeCccccCCCc-ccceEEEEeCchhhHhhhcCCc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSV-TWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~-~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|+++++++++|++|........ .. ..... ..+.+ +.|++|.++.| ..+|+++..+ ...........
T Consensus 185 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~-~~~~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~~l~~~~~ 259 (388)
T PRK07337 185 LRRIVEAVRARGGFTIVDEIYQGLSYDAA--PV-SALSL-GDDVITINSFSKYFNMTGWRLGWLVVPE-ALVGTFEKLAQ 259 (388)
T ss_pred HHHHHHHHHHCCCEEEEeccccccccCCC--Cc-Chhhc-cCCEEEEEechhhcCCchhheeeeecCH-HHHHHHHHHHH
Confidence 68888999999999999999986543211 11 11111 23444 55899999644 5689988653 34333221111
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG---DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM 397 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g---~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~ 397 (480)
.+... ...+...++...+. .+.+.+..++..+.++++.+.|++ . ++.+...|..
T Consensus 260 ~~~~~---------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-~~~~~~~p~~ 316 (388)
T PRK07337 260 NLFIC---------------------ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES-L-GFKVPVMPDG 316 (388)
T ss_pred HhccC---------------------CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh-c-CCccccCCCe
Confidence 11000 12223333333331 244666677778888899999998 4 6654335666
Q ss_pred eEEEEEeecCcc--CCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 398 VNVSFWYLPTRV--RNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 398 ~~v~f~~~~~~~--~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
+++.|...+... ...+ ..++...+. +.|+.+.....+.. ..+++|+++.. ++++++..+++
T Consensus 317 g~f~~~~~~~~~~~~~~~-----------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~r 382 (388)
T PRK07337 317 AFYVYADCRGVAHPAAGD-----------SAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVAR 382 (388)
T ss_pred eEEEEEecccccCCCCCC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHHH
Confidence 666654333210 0000 134555544 55644433222211 14799999543 58899999998
Q ss_pred HHHhh
Q psy12303 473 MDRLG 477 (480)
Q Consensus 473 l~~~~ 477 (480)
|.+++
T Consensus 383 l~~~l 387 (388)
T PRK07337 383 LGKLF 387 (388)
T ss_pred HHHHh
Confidence 88754
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.90 E-value=2.3e-21 Score=192.15 Aligned_cols=297 Identities=18% Similarity=0.203 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
..+..++++++++++|.+ ..+++++|++++..++.+..+ ||+ .|++++.+|+++..++...|.
T Consensus 83 ~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~~~--------------~gd-~V~~~~~~~~~~~~~~~~~g~ 145 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTALAG--------------KGD-LIVSDKLNHASLIDGARLSRA 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHhCC--------------CCC-EEEEeCccCHHHHHHHHhcCC
Confidence 456677888899999854 467777888888877655432 556 788899999999999988887
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.+|.. |++++++.+++.. ..+++++++.+++++|...++++|.++|++||+++++|++|+.+.+..
T Consensus 146 ---~~~~~~~~-----d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~ 214 (385)
T PRK05958 146 ---RVRRYPHN-----DVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGP 214 (385)
T ss_pred ---ceEEeCCC-----CHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCC
Confidence 67777653 8899999887531 126778888888999999999999999999999999999997654421
Q ss_pred ccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.....+...++ ...++++.++||+++. .| |+++ .+++...........+.... .+....
T Consensus 215 ~g~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G-g~~~-~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 275 (385)
T PRK05958 215 QGRGLAAEAGLAGEPDVILVGTLGKALGS-SG-AAVL-GSETLIDYLINRARPFIFTT----------------ALPPAQ 275 (385)
T ss_pred CCCchHHhhCCCCCCceEEEEechhhccc-CC-cEEE-cCHHHHHHHHHhCccceecC----------------CCCHHH
Confidence 10000011111 1234677899999974 33 6555 44544443221111221110 000012
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
..+++.+++.+.. ..++.++..++++++.+.|++ .+++++ ++..+++.+.+ +.. . ...++
T Consensus 276 ~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~--~~~~~~-~~~~~~~~~~~-~~~------------~--~~~~~ 335 (385)
T PRK05958 276 AAAARAALRILRR--EPERRERLAALIARLRAGLRA--LGFQLM-DSQSAIQPLIV-GDN------------E--RALAL 335 (385)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH--cCCCcC-CCCCCEEEEEe-CCH------------H--HHHHH
Confidence 2234444444321 146678889999999999998 467764 45666665543 211 0 02467
Q ss_pred HHHHHhcccEEEeeeee---CCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 429 KGRMMQAGTMMVGYQPL---NDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~---~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.|.+.|+.+...... .+ .+++|++ ++..++++|++++++.|+++
T Consensus 336 ~~~l~~~gI~v~~~~~~~~~~~-~~~lRis-~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 336 AAALQEQGFWVGAIRPPTVPAG-TSRLRIT-LTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHCCceEecccCCCCCCC-CceEEEE-ecCCCCHHHHHHHHHHHHhc
Confidence 78888888555432111 12 4699999 78888999999999999875
No 124
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.4e-21 Score=187.70 Aligned_cols=287 Identities=15% Similarity=0.135 Sum_probs=198.1
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.++++++.++.++++|+|+++++..++.+..+ ||+ .|+++.++|+.+...++..|+ +
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~--------------~gd-~vlv~~P~y~~~~~~~~~~g~---~ 124 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFN--------------HDR-PLLFPDITYSFYPVYAGLYGI---P 124 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEeCCCHHHHHHHHHHcCC---E
Confidence 3677888889999888999999999999999887764 556 788888999888888888888 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc-CcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY-NMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~-~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+|.++++.+|++++++ . +++|++++|+||||.+.+.+++.++++.+ ++++++|++|..+.. ..
T Consensus 125 ~~~v~~~~~~~~d~~~l~~----~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~--~~- 191 (353)
T PRK05387 125 YEEIPLDDDFSIDVEDYLR----P------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG--ES- 191 (353)
T ss_pred EEEeecCCCCCCCHHHHHh----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC--cc-
Confidence 8899998888999998863 2 46789999999999999999999999886 999999999965321 11
Q ss_pred cCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
..+..... .-.+++.|++|.++.| ..+|+++. +++...........+. .++ ...+..
T Consensus 192 ~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~~--------------~~~------~~~~~q 249 (353)
T PRK05387 192 AIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSFN--------------SYP------LDRLAQ 249 (353)
T ss_pred hHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccCC--------------CCC------cCHHHH
Confidence 00011111 3357888999998744 67899885 4555444322111100 000 122233
Q ss_pred HHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
+++...+ ..+.+++..++..++++++.+.|++ . |+++. ++. +.++|.-.+ ... ..++.+.
T Consensus 250 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~-~~~~~~~~~-~~~--------------~~~~~~~ 310 (353)
T PRK05387 250 AGAIAAIEDEAYFEETRAKVIATRERLVEELEA-L-GFEVL-PSK-ANFVFARHP-SHD--------------AAELAAK 310 (353)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeEC-CCc-CcEEEEECC-CCC--------------HHHHHHH
Confidence 3333333 2345677788888899999999999 5 88763 333 444432222 110 2356677
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
|.++|+.+..+.. .+..+++|+++. +++++++++++|+++..
T Consensus 311 l~~~gi~v~~~~~-~~~~~~iRis~~----~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 311 LRERGIIVRHFNK-PRIDQFLRITIG----TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHCCEEEEECCC-CCCCCeEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 8888865433321 122579999943 67999999999998764
No 125
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=3e-21 Score=192.31 Aligned_cols=301 Identities=16% Similarity=0.137 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++.+.+++++|.+ ..+++++|++||..++..++.. .+++ .|+.+...|.+....+...+.
T Consensus 90 ~~~~~~l~~~la~~~g~~--~~~~~~sG~~an~~ai~~l~~~------------~~~~-~i~~~~~~h~s~~~~~~~~~~ 154 (407)
T PRK09064 90 NHYHVELERELADLHGKE--AALVFTSGYVSNDATLSTLAKL------------IPDC-VIFSDELNHASMIEGIRRSRC 154 (407)
T ss_pred HHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHHhCC------------CCCC-EEEEeCcchHHHHHHHHHcCC
Confidence 344556677788999864 3677778889999999877542 0323 777777889998888887776
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc-c
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL-L 269 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~ 269 (480)
++..++.+ |+++|++.++... ..++++|+++++++++|.+.|+++|.++|++||+++++|+||+.+.+ .
T Consensus 155 ---~~~~~~~~-----d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~ 224 (407)
T PRK09064 155 ---EKHIFRHN-----DVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGP 224 (407)
T ss_pred ---cEEEECCC-----CHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 55555543 8889998886421 12478999999999999999999999999999999999999985432 1
Q ss_pred cccccCcccCC-CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 270 SKKYRHPRLTG-IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 270 ~~~~~~~~~~~-~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
....-. ...+ .+.+|+++.+++|.++.+ | |+++ .+++..........+|.+.. ......
T Consensus 225 ~g~g~~-~~~~~~~~~div~~t~sKa~g~~-G-G~~~-~~~~~~~~l~~~~~~~~~t~----------------~~~~~~ 284 (407)
T PRK09064 225 RGGGIA-ERDGLMDRIDIIEGTLAKAFGVM-G-GYIA-GSAALVDAVRSYAPGFIFTT----------------SLPPAI 284 (407)
T ss_pred CCCChH-HhcCCCCCCeEEEEecchhhhcc-C-ceEe-cCHHHHHHHHHhCccccccC----------------cCCHHH
Confidence 110000 1122 235688888999999853 2 5555 44444443322222222110 000012
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+.++..+++.+.. .....++..++++++.+.|++ .|++++. +..+++.+.. +.. . ...++
T Consensus 285 ~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~--~g~~~~~-~~~~iv~i~~-~~~------------~--~~~~l 344 (407)
T PRK09064 285 AAAALASIRHLKE--SNEERERHQERAAKLKAALDA--AGIPVMP-NESHIVPVMV-GDP------------E--KCKKA 344 (407)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH--cCCCCCC-CCCCEEEEEe-CCH------------H--HHHHH
Confidence 2333344444322 233467788999999999998 5787653 4444444432 110 0 02456
Q ss_pred HHHHHhc-ccEEEeeeeeC----CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQA-GTMMVGYQPLN----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~-g~~~~~~~~~~----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.++|.++ |+ ++.+.... + ..++|++ ++..+|++|++++++.|++++++
T Consensus 345 ~~~L~~~~gi-~v~~~~~p~~~~~-~~~lRis-~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 345 SDMLLEEHGI-YVQPINYPTVPRG-TERLRIT-PTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred HHHHHHhCCE-EEeeECCCCCCCC-CceEEEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 7777654 64 44332211 2 3689999 89999999999999999988754
No 126
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.90 E-value=5.6e-21 Score=195.28 Aligned_cols=331 Identities=11% Similarity=0.053 Sum_probs=211.0
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHh--CCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQII--GWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~--g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+...+..+. .. ...|....+..++.+++.+++.+.. +++++++++|+|+++++..++.+..+
T Consensus 164 p~~~~~~~~~~~-~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~----------- 230 (517)
T PRK13355 164 PDEVVYDMAQQL-TD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLD----------- 230 (517)
T ss_pred CHHHHHHHHHHh-hc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCC-----------
Confidence 444444443333 22 2346555566677777666665543 35678899999999999988887754
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
||+ .|+++.++|+.+...+...|. +++.+++++ ++.+|+++|+++++++ +++|++++|+||||.+
T Consensus 231 ---~Gd-~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v 297 (517)
T PRK13355 231 ---DGD-EVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGAL 297 (517)
T ss_pred ---CCC-EEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcC
Confidence 556 888999999999999999987 778888764 4789999999988765 8999999999999999
Q ss_pred cC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccc-eeCccccCCC-cccceEEEEe-CchhhHh
Q psy12303 241 DP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSV-TWNPHKLMGT-LLQCSTIHFK-QDGLLIS 314 (480)
Q Consensus 241 ~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~-~~s~hK~~~~-p~~~g~~~~~-~~~~~~~ 314 (480)
.+ +++|+++|++|++++++|++|....+....... ...-..+.-.+ ..+++|.++. +..+|++++. +......
T Consensus 298 ~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s-~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~ 376 (517)
T PRK13355 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTS-IASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKD 376 (517)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCccc-HHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHH
Confidence 77 888999999999999999999876542211111 11111111123 3578999754 4779998864 2322111
Q ss_pred hh---cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 315 CN---QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-----DEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 315 ~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-----~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
.. ........ + ...+..+++...+. .+.+.+ .++..+.++++.+.|++ +
T Consensus 377 ~~~~l~~~~~~~~------------------~---~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~-~ 433 (517)
T PRK13355 377 YIEGLNMLANMRL------------------C---SNVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNA-I 433 (517)
T ss_pred HHHHHHHHhcCcC------------------C---cChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhc-C
Confidence 00 00000000 0 12333344444332 122222 23455667889999998 8
Q ss_pred CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHH
Q psy12303 387 DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGD 465 (480)
Q Consensus 387 ~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~d 465 (480)
+|+++ .+|+.+.++|...+....+...+ ...+...|.+.|+.++....+.. ..+++|+++. .++++
T Consensus 434 ~g~~~-~~p~g~fy~~~~l~~~~~~~~~~---------~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~ 500 (517)
T PRK13355 434 PGISA-VKPKAAFYIFPKIDVKKFNIHDD---------EQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLED 500 (517)
T ss_pred CCccc-CCCCeeeEEEeecCcccCCCCCH---------HHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHH
Confidence 89886 47888887774333211000000 11233556677765554433321 2679999953 58899
Q ss_pred HHHHHHHHHHhhc
Q psy12303 466 IDFLLTEMDRLGH 478 (480)
Q Consensus 466 i~~~~~~l~~~~~ 478 (480)
++..+++|.++++
T Consensus 501 l~~a~~rl~~~~~ 513 (517)
T PRK13355 501 LEDAMDRLADFFS 513 (517)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998775
No 127
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=1.3e-20 Score=178.73 Aligned_cols=318 Identities=14% Similarity=0.136 Sum_probs=218.1
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
+|...++|++ +++++|.+. ++.+++||.|+.++++++-- .||| +|+++..++.+...+.-
T Consensus 33 G~~v~~FE~~----~ae~~G~k~--ava~~sgT~AL~laL~al~i-------------g~GD-eVI~ps~TfvATan~i~ 92 (374)
T COG0399 33 GPFVRRFEQA----FAEYLGVKY--AVAVSSGTAALHLALLALAI-------------GPGD-EVIVPSFTFVATANAVL 92 (374)
T ss_pred ChHHHHHHHH----HHHHhCCCe--EEEecChHHHHHHHHHhcCC-------------CCCC-EEEecCCchHHHHHHHH
Confidence 6666777765 889999987 89999999999999986531 2667 89999999999999999
Q ss_pred HcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 187 VCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
+.|. +.++|++|+ ++.||++.+|++|++. |++|+..+- .|...++++|.++|++||++++.|+||+.
T Consensus 93 ~~Ga---~PVFvDid~~T~nid~~~ie~aIt~~------tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~ 160 (374)
T COG0399 93 LVGA---KPVFVDIDPDTLNIDPDLIEAAITPR------TKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAH 160 (374)
T ss_pred HcCC---eEEEEecCCcccCCCHHHHHHHcccC------CeEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchhc
Confidence 9999 889999996 4899999999999997 889887655 79999999999999999999999999999
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
|...-.. ....+..+-++++.+.|.+.+. ..|.+++++.++.+.+......-..... .+.+- ....|.
T Consensus 161 Ga~y~gk----~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~-----~~~y~--~~~~G~ 228 (374)
T COG0399 161 GATYKGK----KVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDA-----VFKYL--HEELGY 228 (374)
T ss_pred cCeecCc----ccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCc-----cccce--eeeccc
Confidence 8764332 2222334566777778998875 6788888887766544321110000000 00011 111233
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
+.+.-.+-+++.....+.+++..++.+++++++.+.|++ ++++.+...+....-.++..+..+.... . ..
T Consensus 229 N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~-~~~~~~p~~~~~~~~~~~~~~i~~~~~~-------~--~R 298 (374)
T COG0399 229 NYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKG-LPGITLPPEPDGAVHAWHLYTILVDEEG-------I--SR 298 (374)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCceeeeeeeEEEecCCC-------C--CH
Confidence 333434444444444788899999999999999999999 8887765444443222332222221100 0 01
Q ss_pred HHHHHHHHhcccEEEee-ee-----------------eCC----cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 426 PILKGRMMQAGTMMVGY-QP-----------------LND----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~-~~-----------------~~~----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.+.|.+.|+....+ .+ +.. ....+++. +++..+++|+++++++|++++..
T Consensus 299 ~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP-~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 299 DALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLP-LHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEcc-CCCCCCHHHHHHHHHHHHHHhcc
Confidence 34566666775431110 00 000 03567787 88999999999999999988753
No 128
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=3.3e-21 Score=192.26 Aligned_cols=317 Identities=15% Similarity=0.181 Sum_probs=210.9
Q ss_pred ChhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 107 APVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
..+...+.+++++++.+.+| ++++++++|+|+++|+..++.+..+ ||+ .|+++.+.|+.+.
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~--------------pGD-~Vlv~~P~Y~~f~ 158 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILAD--------------PGD-ALLVPTPYYPGFD 158 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCC--------------CCC-EEEEcCCCCcchH
Confidence 34556788888888888776 4667899999999999888777654 666 8889999999888
Q ss_pred HHHHH-cCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcE
Q psy12303 183 SCAAV-CGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMW 256 (480)
Q Consensus 183 ~~~~~-~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~ 256 (480)
..+.. .|+ +++.|+.++ ++.+|++++++++++..+.|.++++|++++|+||+|.+.+ +++|.++|++||++
T Consensus 159 ~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~ 235 (447)
T PLN02607 159 RDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIH 235 (447)
T ss_pred HHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCE
Confidence 77764 566 788888764 4679999999999987777888999999999999999977 78888999999999
Q ss_pred EEeeccccccccccccccC--cccCCC-----CCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 257 LHVDAAWGGGLLLSKKYRH--PRLTGI-----ERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~--~~~~~~-----~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
+++|++|+...+..+.+.. ...... ..--.++.+++|.++ .+..+|+++..++.+....... ..+. .
T Consensus 236 lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~-~~~~-~--- 310 (447)
T PLN02607 236 LVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM-SSFT-L--- 310 (447)
T ss_pred EEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH-hhcC-C---
Confidence 9999999876542211111 011111 011145679999997 4478999997665554332211 1110 0
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEE
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-----DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-----~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~ 403 (480)
...+...+....+. ...+++..++..+..+.+.+.|++ .|+++. ++..+.++|.
T Consensus 311 ------------------~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~--~gi~~~-~~~ag~fvw~ 369 (447)
T PLN02607 311 ------------------VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRR--AGIECL-KGNAGLFCWM 369 (447)
T ss_pred ------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcc-cCCeeEEEEE
Confidence 01112222222221 233455566677778888899988 477754 5777777775
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
-.+...... .... ..++.+++.+ .| +.+.++...+ .++|+|++|.+ .++++++..+++|.+.++
T Consensus 370 ~L~~~~~~~---~~~~-----e~~l~~~ll~~~g-V~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 370 NLSPLLETP---TREG-----ELALWDSILREVK-LNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMD 436 (447)
T ss_pred EchHhhcCC---Cchh-----HHHHHHHHHHhCC-EEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHH
Confidence 443221100 0000 1246666665 46 4455443221 26899999543 368999999999988764
No 129
>PRK07550 hypothetical protein; Provisional
Probab=99.90 E-value=1.9e-20 Score=185.19 Aligned_cols=322 Identities=11% Similarity=0.074 Sum_probs=210.0
Q ss_pred HHHHHHHHc-CcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATA-NTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~-~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+.... +.....|...++..++++.+.+++.+..|. +++++++|+|+++|+..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------------- 112 (386)
T PRK07550 47 LLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAG-------------- 112 (386)
T ss_pred HHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcC--------------
Confidence 334444432 223344555567788999999999888774 567899999999999888877643
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
||+ .|+++.+.|+.+...++..|. +++.++.++ ++.+|+++|++++++. +++|++++++||||.+.+
T Consensus 113 ~gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~ 182 (386)
T PRK07550 113 AGD-EVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPP 182 (386)
T ss_pred CCC-EEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCH
Confidence 556 788999999888888888888 889999874 4578999999999764 788888899999999876
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCC--CCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTG--IERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
+++|.++|++||+++++|++|+.+...... ..+.... ...-.+++.|++|.++ .+.++|+++.. ...+.....
T Consensus 183 ~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~-~~~~~~~~~ 260 (386)
T PRK07550 183 ELLHELYDLARRHGIALILDETYRDFDSGGGA-PHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS-PARIAEIEK 260 (386)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhccCCCC-CcchhhCCCccccEEEEecchhhccCcccceEeeecC-HHHHHHHHH
Confidence 789999999999999999999875321111 1101111 1112345779999997 44678888864 334433221
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
....+. . + ...+..++....+. .+..++..++..+.++.+.+.|.+ ++++.+. +
T Consensus 261 ~~~~~~-----------------~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~ 316 (386)
T PRK07550 261 FMDTVA-----------------I-C---APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR-LPGWELL--A 316 (386)
T ss_pred HHhhcc-----------------c-C---CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh-CCCceeC--C
Confidence 111000 0 0 11222222222221 344556667778888899999998 6677653 4
Q ss_pred ceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 396 ~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
..+.++|...+. ... ..++.++|. +.|+.+.....+.. ..+++|+++.. .++++++.+++.
T Consensus 317 ~g~~~~~~~~~~~~~~--------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~ 380 (386)
T PRK07550 317 SGAYFAYVRHPFPDRP--------------SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVER 380 (386)
T ss_pred CceEEEEecCCCCCCC--------------HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHH
Confidence 455555533332 111 245667665 45644433222211 14699999532 468999999999
Q ss_pred HHHh
Q psy12303 473 MDRL 476 (480)
Q Consensus 473 l~~~ 476 (480)
|.++
T Consensus 381 l~~~ 384 (386)
T PRK07550 381 LRAF 384 (386)
T ss_pred HHhh
Confidence 9875
No 130
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=5.4e-21 Score=188.10 Aligned_cols=288 Identities=15% Similarity=0.100 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|++++++++|+|+++++..++.+..+ ||+ .|+++.++|+.+...++..|. +
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~--------------~gd-~Vlv~~P~y~~y~~~~~~~g~---~ 150 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADELIDLLMRCVLD--------------PGD-KIIDCPPTFGMYVFDAAVNGA---E 150 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCChHHHHHHHHHcCC---E
Confidence 3577889999999888999999999999888876643 555 788888898888888888887 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHH-HHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVL-ERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~-~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+|.++++.+|+++|+++++ +. +++|++++|+||||.+.+.+++.++++.. +++++|++|..+.......
T Consensus 151 ~~~v~~~~~~~~d~~~l~~~~~~~~------~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~ 223 (380)
T PLN03026 151 VIKVPRTPDFSLDVPRIVEAVETHK------PKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRM 223 (380)
T ss_pred EEEeecCCCCCcCHHHHHHHHhccC------CcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchH
Confidence 8889988788999999999883 33 88999999999999999999999999865 9999999997654311100
Q ss_pred cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. .+... .-.+++.|++|.++ .+..+|+++. +++.+........+|- ...+..
T Consensus 224 -~-~~~~~-~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~-----------------------~~~~~q 276 (380)
T PLN03026 224 -K-WVKKY-DNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN-----------------------VSVAAE 276 (380)
T ss_pred -H-HHHhC-CCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCC-----------------------CCHHHH
Confidence 0 11111 23466789999998 4467888885 4445444332222111 122233
Q ss_pred HHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
.++...+ ..+.+++..++..+.++++.+.|++ ++++.+ . |..+++++...+.... ..++.+.
T Consensus 277 ~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~-~-p~~~~f~~~~~~~~~~--------------~~~~~~~ 339 (380)
T PLN03026 277 VAACAALSNPKYLEDVKNALVEERERLFGLLKE-VPFLEP-Y-PSDANFILCRVTSGRD--------------AKKLKED 339 (380)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCeE-C-CCCCeEEEEECCCCCC--------------HHHHHHH
Confidence 3333333 2345677778888889999999998 666665 3 4444444432322111 2356778
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
|.+.|+.+..... .+..+++|+++. +.+++++++++|+++
T Consensus 340 l~~~gI~v~~~~~-~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 340 LAKMGVMVRHYNS-KELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred HHHCCeEEEECCC-CCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 8888865443322 222579999944 678999999999864
No 131
>PRK07683 aminotransferase A; Validated
Probab=99.89 E-value=1.8e-20 Score=185.26 Aligned_cols=325 Identities=13% Similarity=0.100 Sum_probs=214.0
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...+......|...++..++++++.+++.+..|. +++ ++++|+|+++|+..++.+...
T Consensus 46 ~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-------------- 111 (387)
T PRK07683 46 VKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILE-------------- 111 (387)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC--------------
Confidence 335555555444455655566788888888888877665 555 899999999999988877643
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
+|+ .|+++.+.++.+..++..+|+ +++.++.++ ++.+|++++++.+++. +++|++++++||||.+.+
T Consensus 112 ~gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~s~~ 181 (387)
T PRK07683 112 PGT-EVILPAPIYPGYEPIIRLCGA---KPVFIDTRSTGFRLTAEALENAITEK------TRCVVLPYPSNPTGVTLSKE 181 (387)
T ss_pred CCC-EEEEcCCCccchHHHHHHcCC---EEEEeecCcccCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHH
Confidence 445 788899999889999998888 788898875 4678899999888654 789999999999999865
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|+++|+++++|++|..+....+........+...-.+++.+++|.++ .+..+|+++.. ..+....... .
T Consensus 182 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l~~~~~~~-~ 259 (387)
T PRK07683 182 ELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYLAKHILKV-H 259 (387)
T ss_pred HHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHHHHHHHHH-H
Confidence 788999999999999999999976542111100011111123466789999998 44678998864 4444433211 1
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
.+... + ...+...++...+ +...+++..++..+.++.+.+.|.+ . ++.+ .+|..+
T Consensus 260 ~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~-~~~~~~ 316 (387)
T PRK07683 260 QYNVT-----------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS-M-GLDV-EKPTGA 316 (387)
T ss_pred HhccC-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCcc-cCCCee
Confidence 11100 0 1112222222222 4455667777788889999999988 4 7765 367777
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHH-HHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGR-MMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.|...+.. +.+ ..++... +.+.|+.+.+...+.. ..+++|+++. . +++++...+++|.++
T Consensus 317 ~~~~~~~~~~--~~~-----------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~-~--~~~~~~~al~~l~~~ 380 (387)
T PRK07683 317 FYLFPSIGHF--TMS-----------SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA-Y--SIETLKEGLDRLEAF 380 (387)
T ss_pred EEEEEecccC--CCC-----------HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHHHHH
Confidence 6666433321 010 1233344 4456754443322221 1479999954 2 688999999999887
Q ss_pred hc
Q psy12303 477 GH 478 (480)
Q Consensus 477 ~~ 478 (480)
++
T Consensus 381 l~ 382 (387)
T PRK07683 381 LQ 382 (387)
T ss_pred HH
Confidence 64
No 132
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.89 E-value=1.2e-21 Score=190.58 Aligned_cols=312 Identities=13% Similarity=0.034 Sum_probs=201.2
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCC-CCeEEC-CChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQG-GDSILA-PGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VR 182 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t-~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~ 182 (480)
.++.+.++.+++++.+++++|+++ .+++|+ +|||.++..++...... + .++++...|.+ +.
T Consensus 35 r~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~---------------~-~l~i~~G~~~~~~~ 98 (361)
T TIGR01366 35 RQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK---------------K-SLHLSFGEFSSKFA 98 (361)
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc---------------c-ccEEecCHHHHHHH
Confidence 356667888889999999999954 468885 66999999888665321 2 33333445543 44
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+....... ++..++.+....++. .+. ..+++|++++.+|.+|.+.|+++| ++++|++++||++
T Consensus 99 ~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~~------~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDav 163 (361)
T TIGR01366 99 KAVKLAPWLG-EPIIVTADPGSAPEP-----QAD------PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDAT 163 (361)
T ss_pred HHHHhhhccC-CceEEecCCCCCCCC-----ccC------CCCCEEEEcccCCccceecccccc---cccCCCeEEEEcC
Confidence 4445432212 456666655443443 122 238999999999999999999988 5889999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCC------cccccccccccCcccCC
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMS------AEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~ 336 (480)
++.+..+.+.. .+|++++++||++++|.|.++++++++.+ ....... +.|+...... ...++.
T Consensus 164 qs~g~~~idv~---------~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~~~-~~~~~~ 232 (361)
T TIGR01366 164 SGAGGLPVDIA---------ETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPTAV-DNSLKN 232 (361)
T ss_pred ccccCCCCCHH---------HCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHHHH-hccccC
Confidence 99998877652 37999999999999887877777766533 3322111 1122111000 000111
Q ss_pred CCccccCCCCC-CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-C--ceeE-EEEEeecCccC
Q psy12303 337 GDKVIQCGRHN-DIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-P--EMVN-VSFWYLPTRVR 410 (480)
Q Consensus 337 ~~~~~~~~r~~-~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~--~~~~-v~f~~~~~~~~ 410 (480)
++. .+-.. ..+++..+++.+..+ +++.+.++..++++++++.+.+ .++++++.. + .+.. .++.+ +....
T Consensus 233 ~t~---~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s~~v~~v~~-~~g~~ 307 (361)
T TIGR01366 233 QTY---NTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQE-RPYATPFVTDPGKRSQVVGTIDF-VDDID 307 (361)
T ss_pred CCC---CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChhhcccceEEEEC-CCccC
Confidence 111 11111 223556667766556 5888889999999999999999 776776532 2 1211 23433 22211
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++...|.+.|+.+......-+ ...+|++ .+.++|++||++++++|++++++|
T Consensus 308 --------------~~~v~~~L~~~gI~i~~~~~~l~-~~~vRis-~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 308 --------------AATVAKILRANGIVDTEPYRKLG-RNQLRVA-MFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred --------------HHHHHHHHHHCCCeeccCccccC-CCcEEEE-cCCCCCHHHHHHHHHHHHHHHhhC
Confidence 24566777777755432211112 4689999 778999999999999999988765
No 133
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.4e-20 Score=184.30 Aligned_cols=338 Identities=9% Similarity=0.101 Sum_probs=218.3
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
+......+.....+.....|....+...+.+.+++|+.+..|. ++. ++++|+|+++|+..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~---------- 117 (403)
T PRK08636 48 PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITN---------- 117 (403)
T ss_pred CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCC----------
Confidence 4444545444443333455655567778888999999888885 455 699999999999999887754
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHC-CCccEEEEeccCCCccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAK-GDIPFFVNCTSGTTVLG 238 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~-~~~~~~v~~~~~~~~~G 238 (480)
||+ .|++.+++|+.+...+...|. +++.+|.+ +++.+|++.+.+.+++..++ +.++++|++++|+||||
T Consensus 118 ----~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG 189 (403)
T PRK08636 118 ----PGD-VAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTT 189 (403)
T ss_pred ----CCC-EEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 556 888999999999999999998 88888874 45789988776555543322 24588999999999999
Q ss_pred cccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCC---CccceeCccccCC-CcccceEEEEeCchh
Q psy12303 239 AFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER---ADSVTWNPHKLMG-TLLQCSTIHFKQDGL 311 (480)
Q Consensus 239 ~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~---~D~~~~s~hK~~~-~p~~~g~~~~~~~~~ 311 (480)
.+.+ +++|.++|++|++++++|++|+....... ..+.+..++. ..+.+.|++|.++ .+..+|+++. ++.+
T Consensus 190 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~l 266 (403)
T PRK08636 190 ATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKL 266 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHH
Confidence 9976 57888889999999999999987654211 1111222211 2234678999996 5578999874 4554
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
........ .+.. .+ .......+.. ..+.. ..+.++++.+...+..+.+.+.|++ . ++.+
T Consensus 267 i~~~~~~~-~~~~-----------~~-----~~~~~q~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~ 325 (403)
T PRK08636 267 VGALKKIK-SWLD-----------YG-----MFTPIQVAAT-IALDG-DQSCVEEIRETYRKRRDVLIESFAN-A-GWEL 325 (403)
T ss_pred HHHHHHHH-HHhc-----------cc-----CChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc
Confidence 44332111 1000 00 0000111111 12221 2455667777788888999999998 4 7765
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~ 469 (480)
.+|..+.++|...+......+ ..++...+. +.|+.+.+...+... .+++|+++. .+++++++.
T Consensus 326 -~~p~~g~~~~~~l~~~~~~~~-----------~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~ 390 (403)
T PRK08636 326 -QKPRASMFVWAKIPEPARHLG-----------SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQA 390 (403)
T ss_pred -cCCCcceEEEEECCCccCCCC-----------HHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHH
Confidence 356677766654443221111 124555544 456544433222221 479999953 478999999
Q ss_pred HHHHHHhhcc
Q psy12303 470 LTEMDRLGHD 479 (480)
Q Consensus 470 ~~~l~~~~~~ 479 (480)
++.|++++++
T Consensus 391 ~~rl~~~l~~ 400 (403)
T PRK08636 391 ARNIKKFLKE 400 (403)
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 134
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=1.2e-20 Score=187.78 Aligned_cols=299 Identities=15% Similarity=0.157 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++.+.+++++|.+ ..+++++|++||..++.++... .+|+ +|+++...|.++..++...|.
T Consensus 90 ~~~~~le~~la~~~g~~--~~~~~~SG~~An~~ai~~l~~~------------~~g~-~I~~~~~~H~s~~~~~~~~g~- 153 (406)
T PRK13393 90 HYHVLLEAELADLHGKE--AALLFTSGYVSNWAALSTLGSR------------LPGC-VILSDELNHASMIEGIRHSRA- 153 (406)
T ss_pred HHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhhcC------------CCCC-EEEEccchhHHHHHHHHHcCC-
Confidence 35566778899999974 4777778889999999865321 0334 788888999999999888775
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc-cc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL-LS 270 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~ 270 (480)
+++.++.+ |++++++.++... ...+++|+++++++++|.+.|+++|.++|+++|+++++|++|+.+.+ ..
T Consensus 154 --~~~~~~~~-----d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~ 224 (406)
T PRK13393 154 --EKRIFRHN-----DPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPR 224 (406)
T ss_pred --eEEEeCCC-----CHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCC
Confidence 56666654 7888888876431 12478999999999999999999999999999999999999985543 11
Q ss_pred ccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CC
Q psy12303 271 KKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-ND 348 (480)
Q Consensus 271 ~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~ 348 (480)
...-. ...++ +..|+++.++.|.++.+. |+++ .++...........+|.+. .+.. ..
T Consensus 225 G~g~~-~~~~~~~~~~i~~~tlsKa~g~~G--G~~~-~~~~~~~~l~~~~~~~~~t-----------------~~~~p~~ 283 (406)
T PRK13393 225 GGGIA-EREGLADRLTIIEGTLAKAFGVMG--GYIT-GSAALCDFIRSFASGFIFT-----------------TSLPPAV 283 (406)
T ss_pred CCchh-hhcCCCCCCeEEEEeCchhhcccC--ceee-CCHHHHHHHHHhCcCceec-----------------CccCHHH
Confidence 11000 11122 246888788999998632 5544 4555444332222222211 0111 12
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
..++.++++.+...+ ...++..++++++.+.|++ .+++++ ++...++.+.. +.. . ...++
T Consensus 284 ~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~i~~v~~-~~~-------~-------~~~~l 343 (406)
T PRK13393 284 AAGALASVRHLKASS--AERERHQDRVARLRARLDK--AGIPHL-PNPSHIVPVMV-GDP-------V-------LCKQI 343 (406)
T ss_pred HHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHH--cCCCcC-CCCCCeEEEEe-CCH-------H-------HHHHH
Confidence 234444554432222 2235667889999999988 477765 44455544422 110 0 02457
Q ss_pred HHHHHhc-ccEEEeeeee----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQA-GTMMVGYQPL----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~-g~~~~~~~~~----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.++|.++ |+ ++..... .+ ...+|++ ++..+|++||++++++|+++.++
T Consensus 344 ~~~L~~~~Gi-~v~~~~~p~~p~g-~~~iRis-~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 344 SDELLDRYGI-YVQPINYPTVPRG-TERLRIT-PSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred HHHHHHhCCE-EEEeECCCCCCCC-CceEEEE-ECCCCCHHHHHHHHHHHHHHHHh
Confidence 7778775 74 4433221 23 3689999 99999999999999999987654
No 135
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.2e-20 Score=184.71 Aligned_cols=287 Identities=15% Similarity=0.122 Sum_probs=197.5
Q ss_pred HHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++.+++++|.++ .++++|+|+++++..++.+..+ ||+ .|+++.++|+.+...++..|+
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~--------------~gd-~vlv~~P~y~~~~~~~~~~g~--- 127 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAK--------------PGA-TVLAPEPGFVMYRMSAKLAGL--- 127 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEECCCCHHHHHHHHHHcCC---
Confidence 356777888889865 4799999999988888776643 555 788999999999999999998
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+++.+|.++++.+|+++|++++++. ++++|++++++||||.+.+.+++.++++..++++++|++|..+... ..
T Consensus 128 ~~~~i~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~--~~ 200 (356)
T PRK04870 128 EFVGVPLTADFTLDLPAMLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGD--SW 200 (356)
T ss_pred EEEEecCCCCCCCCHHHHHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCc--ch
Confidence 8899999888899999999998642 2789999999999999999999998888778999999999764321 11
Q ss_pred cCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW 353 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~ 353 (480)
.+.+... .--+++.|++|++..+..+|+++.. +..+.........|. ...+...
T Consensus 201 -~~~~~~~-~~vi~~~S~SK~~~~GlRiG~~i~~-~~~i~~~~~~~~~~~-----------------------~~~~~q~ 254 (356)
T PRK04870 201 -LPRLARF-PNLLVMRTVSKLGLAGLRLGYLAGH-PAWIAELDKVRPPYN-----------------------VNVLTQA 254 (356)
T ss_pred -HHHHhhC-CCEEEEecchhhhhHHHhhhhhhCC-HHHHHHHHHccCCCc-----------------------CCHHHHH
Confidence 0112221 1236677999954444678988754 445444332221110 1112222
Q ss_pred HHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 354 LQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 354 ~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
++...+ ..+.+++..++..+.++.+.+.|++ .+++.+. ++....+.+. .+ . ..++.+.|
T Consensus 255 ~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~~~~~~~~-~~-~----------------~~~~~~~l 314 (356)
T PRK04870 255 TALFALEHVDVLDAQAAQLRAERTRLAAALAA-LPGVTVF-PSAANFILVR-VP-D----------------AAAVFDGL 314 (356)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEC-CCCCeEEEEE-CC-C----------------HHHHHHHH
Confidence 222222 1344677788888999999999999 8898763 4444433332 22 1 13456777
Q ss_pred HhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 433 MQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.|+.+.....+.. ..+++|+++. +.+++++++++|+++
T Consensus 315 ~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 315 KTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred HHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 788855444322211 2579999943 689999999999876
No 136
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=1.1e-20 Score=188.32 Aligned_cols=323 Identities=17% Similarity=0.227 Sum_probs=199.2
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
...|..+++..++++. +++++|.+ .+++|+|||+|+..++.+..+ ||| |+++...+.+
T Consensus 71 ~~~Y~~~~g~~~Lrea----ia~~~~~~--~vv~t~ggt~A~~~~~~all~--------------pGD--Vii~~p~~~~ 128 (460)
T PRK13238 71 DEAYAGSRSYYRLEDA----VKDIFGYP--YTIPTHQGRAAEQILFPVLIK--------------KGD--VVPSNYHFDT 128 (460)
T ss_pred CcccCCCCCHHHHHHH----HHHHhCCC--cEEECCCHHHHHHHHHHHhCC--------------CCC--EEccCCcccc
Confidence 3457777777777666 66677765 489999999999999887754 667 6666665556
Q ss_pred HHHHHHHcCCCCCCeEEeeCCC--------C--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccc-ccc---ChHHH
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDK--------R--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLG-AFD---PIEEI 246 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~--------~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G-~~~---~l~~I 246 (480)
+...+...|. +++.+++++ . |.+|+++|++++++.. ..++++|++++++|++| .+. ++++|
T Consensus 129 ~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I 203 (460)
T PRK13238 129 TRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAV 203 (460)
T ss_pred hHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHH
Confidence 6666777777 778888753 2 4599999999998531 12389999999999998 554 47899
Q ss_pred HHHHHHcCcEEEeecccccc-ccccc----cccCcccC-----CCCCCccceeCccccCCCcccceEEEEeCchhhHhhh
Q psy12303 247 ADICQKYNMWLHVDAAWGGG-LLLSK----KYRHPRLT-----GIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 247 ~~i~~~~~~~l~vD~a~~~~-~~~~~----~~~~~~~~-----~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~ 316 (480)
.++|++||++++.|+|+... .++.. .+....+. -.+.+|++++|++|.+++|.| |++++++.++...+.
T Consensus 204 ~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~ 282 (460)
T PRK13238 204 YEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECR 282 (460)
T ss_pred HHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhh
Confidence 99999999999999988542 22211 01100111 113689999999999998875 777777666655443
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCC-chHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND-IFKLWLQWRA-KGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~-~l~~~~~l~~-~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
.....+ .+. .++ ++-... ..++..+++. ...+ ..+...+.+++|.+.|.+ .|+.++ .
T Consensus 283 ~~~~~~--~g~-----------~t~-~g~~~~~~~Ala~~l~e~~~~~----~~~~~~~~~~~l~~~L~~--~G~~~~-~ 341 (460)
T PRK13238 283 TLCILY--EGF-----------PTY-GGLAGRDMEALAVGLYEGMDED----YLAYRIGQVEYLGEGLEE--AGVPIQ-T 341 (460)
T ss_pred hccccc--CCc-----------ccc-cCcHHHHHHHHHhhHHHhhChH----HHHHHHHHHHHHHHHHHH--CCCCeE-c
Confidence 221110 000 000 111111 1222223322 1222 333344467999999998 599987 4
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeee-------CC-----cccEEEEecccCCC
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPL-------ND-----LPNFFRNIISSAAV 461 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~-------~~-----~~~~~R~~~~~~~~ 461 (480)
|..+.++|.-...-........ +. ..++...|. +.|+..+..+.+ .+ ....+|++++-..-
T Consensus 342 p~Gg~~v~~d~~~~~~~~~~~~----~~--~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~ 415 (460)
T PRK13238 342 PAGGHAVFVDAGKFLPHIPAEQ----FP--AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVY 415 (460)
T ss_pred cCCceEEEEEchhcCCCCCCCC----Cc--hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccC
Confidence 6666665543211100000000 00 123444444 445443332211 11 13789999876677
Q ss_pred CHHHHHHHHHHHHHhhc
Q psy12303 462 TEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~ 478 (480)
|.+++++++++|+++.+
T Consensus 416 ~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 416 TQSHMDYVAEALKAVKE 432 (460)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 137
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.89 E-value=3e-20 Score=183.88 Aligned_cols=321 Identities=13% Similarity=0.070 Sum_probs=207.2
Q ss_pred HHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...+.. ....|....+..++.+.+.+++.+.+|. ++. .+++|+|+++++..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~------------- 115 (385)
T PRK09276 49 IIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN------------- 115 (385)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC-------------
Confidence 33555544332 2234544445577888888888887775 444 588899999999888877654
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|+++.++|+.+...++..|. +++.+|.+. ++.+|++++++.+.+. +++|++++|+||||.+.+
T Consensus 116 -~gd-~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~ 184 (385)
T PRK09276 116 -PGD-VVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVAD 184 (385)
T ss_pred -CCC-EEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCC
Confidence 556 788899999999999999988 888889864 3568999998887654 889999999999999977
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhc
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~ 317 (480)
+++|.++|++||+++++|++|+.+......... ..+.+.....+++.|++|.++.| ..+|+++. ++........
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~~~~~ 263 (385)
T PRK09276 185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIAGLGK 263 (385)
T ss_pred HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHHHHHH
Confidence 588888899999999999999876542111000 01111112346677999999644 56898875 4444443321
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
... .... ....+...++...+ ....+++..++..+.++++.+.|++ . ++++. +|
T Consensus 264 ~~~-~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~ 319 (385)
T PRK09276 264 VKS-NVDS--------------------GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK-L-GLEVE-PP 319 (385)
T ss_pred HHh-hccC--------------------CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-C-CCccc-CC
Confidence 111 1000 01111222222222 3455677777888889999999999 5 78764 56
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
..+.+.+...+.... ..++.+.|.+ .|+.+.....+... .+++|+++. .+++++...++.|
T Consensus 320 ~~~~~~~v~~~~~~~--------------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l 382 (385)
T PRK09276 320 KATFYVWAPVPKGYT--------------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT---VPDERIEEAVERI 382 (385)
T ss_pred CcceEEEEECCCCCC--------------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC---CCHHHHHHHHHHH
Confidence 666544443332211 2355666654 56544332222211 469999953 3678888888877
Q ss_pred HH
Q psy12303 474 DR 475 (480)
Q Consensus 474 ~~ 475 (480)
.+
T Consensus 383 ~~ 384 (385)
T PRK09276 383 KK 384 (385)
T ss_pred hh
Confidence 64
No 138
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=5.8e-21 Score=190.69 Aligned_cols=320 Identities=16% Similarity=0.100 Sum_probs=200.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEE---CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC---CCchhH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSIL---APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD---QCHYSV 181 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~---t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~---~~h~s~ 181 (480)
....++|+...+..+++|+.......+ +.+|+.||+.++.++.+ ||+ .|+..+ ..|.++
T Consensus 76 ~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~--------------pgD-~Il~~d~~~gGhl~H 140 (475)
T PLN03226 76 EYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ--------------PHD-RIMGLDLPHGGHLSH 140 (475)
T ss_pred hhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--------------CCC-EEEECCCCcCcchhh
Confidence 456788888888899999987644333 47899999999988865 556 666633 334443
Q ss_pred ---HHHHHHcCCCCCCeE--EeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 182 ---RSCAAVCGLGTDNCV--EVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 182 ---~~~~~~~g~~~~~v~--~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
...+...+.+. .+. ..+++ +++.+|+++|++++++. +|++|++. .+.+|..-|+++|.++|+++|+
T Consensus 141 ~~~~~g~~~s~~~~-~~~~~~y~~~~~~g~iD~d~Le~~l~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga 212 (475)
T PLN03226 141 GYQTDGKKISATSI-YFESMPYRLDESTGLIDYDKLEKKAMLF-----RPKLIIAG--ASAYPRDWDYARMRKIADKVGA 212 (475)
T ss_pred hhhhcccccccceE-EEEeeeeeecCCCCCcCHHHHHHHHhhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHHcCC
Confidence 22222222210 111 23344 46899999999998753 27766553 3457888999999999999999
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
++++|+||+.+.+..+.... . ++.+|++++++|||+++|.| |++++++. ...........|..... ..+
T Consensus 213 ~LlvD~AH~~Gli~~~~~~~-p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~-----~i~ 281 (475)
T PLN03226 213 LLMCDMAHISGLVAAQEAAS-P---FEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYED-----KIN 281 (475)
T ss_pred EEEEEchhhhCcccCCCCCC-C---CCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHH-----Hhc
Confidence 99999999999887665333 1 23799999999999988987 77777553 22111000000000000 000
Q ss_pred C-CCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCC
Q psy12303 336 T-GDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 336 ~-~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~ 412 (480)
. ....++.+-.. .+.++..+++.+-..+++++.++..+++++|.+.|.+ .|++++... ...++.+.+.+..+.
T Consensus 282 ~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~--~G~~l~~~~t~~hi~lv~~~~~gi~-- 357 (475)
T PLN03226 282 FAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS--KGYKLVTGGTDNHLVLWDLRPLGLT-- 357 (475)
T ss_pred cccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCCCCCEEEEEccCCCCC--
Confidence 0 00011222111 3445556666655556778889999999999999999 799998642 234555544343322
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-----CCcccEEEEe---cccCCCCHHHHHHHHHHHHHhhc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-----NDLPNFFRNI---ISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-----~~~~~~~R~~---~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|...|+. +..... .-.+..+|+. +++...+++|++++.+.|.++++
T Consensus 358 ------------~~~~~~~L~~~~I~-~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 358 ------------GSRVEKVLDLAHIT-LNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred ------------HHHHHHHHHHCCCE-ECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 12344556566643 221110 0014568883 16778899999999999988765
No 139
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.89 E-value=3.8e-21 Score=171.85 Aligned_cols=315 Identities=13% Similarity=0.135 Sum_probs=230.7
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh----HHH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS----VRS 183 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s----~~~ 183 (480)
+.--.+-..+...++.++|..+++++++.+.|.-++..|.++... .+|+.+|+....++++ .+.
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~------------~~~r~vIv~E~~~fpTdly~a~g 139 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRP------------QEGRRVIVSEGDNFPTDLYIAEG 139 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhcc------------CCCceEEeecCCCCCcchhhhcc
Confidence 334567778899999999999989999988887666666666543 1345355544444544 334
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.+.+++.+ .+-.+.+.+++++++++++ +..|++++.+.-||...++.+|.++++++|+++..|-||
T Consensus 140 ~~~~~~~~--------~~~~~~~~P~~~~~~~~dd------~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAH 205 (407)
T COG3844 140 LADLLGIG--------YDLEGVIAPRALEEAITDD------VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAH 205 (407)
T ss_pred hhhhhccc--------ccceeeeChHHHHHhhccc------eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhc
Confidence 45555543 2334556888999999998 999999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCc---ccCCCCc
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV---RYDTGDK 339 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~ 339 (480)
+.|.++.+.... ++|+.+++.||++++++ +.+++++.++ ..+........|+.+....... ....|..
T Consensus 206 saGavp~~Lh~~-------gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~ 277 (407)
T COG3844 206 SAGAVPVDLHAA-------GADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGAR 277 (407)
T ss_pred ccCCcceeeccc-------CCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCcccc
Confidence 999999988888 99999999999998654 4577776554 3344444455666554332111 2223334
Q ss_pred cccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--CeEEecC----CceeEEEEEeecCccCC
Q psy12303 340 VIQCGRHN--DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD--KFYLILE----PEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 340 ~~~~~r~~--~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~--g~~~~~~----~~~~~v~f~~~~~~~~~ 411 (480)
.+.||... +..++-.+|..++.-++.++.++...|+++|.+.++.+.+ ++++.+| ..++.+.+.+. .
T Consensus 278 rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-~---- 352 (407)
T COG3844 278 RFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-H---- 352 (407)
T ss_pred ceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-c----
Confidence 44455432 3445555677777778999999999999999999987445 7888764 34566777432 1
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|+++|++ .. +.. ++.+|+.+...+++-+||-..++.|++++++
T Consensus 353 -------------~~~V~qaLi~rGVi-gD---~R~-P~vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 353 -------------GYQVMQALIDRGVI-GD---FRE-PDVLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred -------------HHHHHHHHHHcCcc-cc---ccC-CCeeeecCccceechhHHHHHHHHHHHHHHh
Confidence 35788999999954 22 223 6899999888999999999999999998764
No 140
>PLN02231 alanine transaminase
Probab=99.89 E-value=3.2e-20 Score=188.29 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=215.7
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
...|..+.+..++.+.+.+++.+..|. +++++++|+|+++|+..++.++... +|+ .|+++.+.|
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~-------------~gd-~Vli~~P~Y 226 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------------EKD-GILCPIPQY 226 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccC-------------CCC-EEEEeCCCC
Confidence 455777788888999999999887675 5679999999999999999887532 445 788999999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
+.+...+...|. +++.++.++ ++.+|+++|++++++...++.++++|++++|+||||.+.+ +++|.++|++|
T Consensus 227 ~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~ 303 (534)
T PLN02231 227 PLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQE 303 (534)
T ss_pred hhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 999999999987 788888875 3789999999999876655556899999999999999965 78889999999
Q ss_pred CcEEEeecccccccccc-ccccC--cccC--CC--CCCccc-eeCccccCC--CcccceEEEEe--CchhhHhhhcCCcc
Q psy12303 254 NMWLHVDAAWGGGLLLS-KKYRH--PRLT--GI--ERADSV-TWNPHKLMG--TLLQCSTIHFK--QDGLLISCNQMSAE 321 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~-~~~~~--~~~~--~~--~~~D~~-~~s~hK~~~--~p~~~g~~~~~--~~~~~~~~~~~~~~ 321 (480)
|+++++|++|....+.. ..+.. .... +. .....+ ..|++|.+. .+..+|++.+. ++............
T Consensus 304 ~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~ 383 (534)
T PLN02231 304 GLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASV 383 (534)
T ss_pred CCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhh
Confidence 99999999998865421 11100 0000 11 111233 448999653 45789998763 44444433211110
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHH--hcHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRA--KGDEG-------FEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~--~g~~~-------~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+ |+.......+...+.. .|... ..++.+...+.++.+.+.|++ ++|+.+
T Consensus 384 ~~-------------------~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~-~~gi~~- 442 (534)
T PLN02231 384 NL-------------------CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNS-LEGVTC- 442 (534)
T ss_pred hc-------------------CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcee-
Confidence 00 1110111111112210 01112 233456778888999999999 889987
Q ss_pred cCCceeEEEEEee--cCccCCCchhhHHHHhhhh-hHHHHHHHH-hcccEEEeeeeeCCc--ccEEEEecccCCCCHHHH
Q psy12303 393 LEPEMVNVSFWYL--PTRVRNMPHEKRLNILGEI-TPILKGRMM-QAGTMMVGYQPLNDL--PNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 393 ~~~~~~~v~f~~~--~~~~~~~~~~~~~~~l~~~-~~~i~~~l~-~~g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di 466 (480)
.+|+++.+.|.-. |.. .. +..+.+... ...+..+|. +.|++++....+... ..++|+++ ..+++++
T Consensus 443 ~~p~Ggfylw~~l~lp~~--~~---~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~---~~~~e~l 514 (534)
T PLN02231 443 NKAEGAMYLFPRIHLPQK--AI---KAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI---LPQEDKI 514 (534)
T ss_pred cCCCeeeEEeccccCcHH--HH---HHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe---CCCHHHH
Confidence 5788888887322 111 00 000000000 112334454 567655554443211 35799994 3588999
Q ss_pred HHHHHHHHHhhcc
Q psy12303 467 DFLLTEMDRLGHD 479 (480)
Q Consensus 467 ~~~~~~l~~~~~~ 479 (480)
+..+++|.++.++
T Consensus 515 ~eal~RL~~~~~~ 527 (534)
T PLN02231 515 PAIVSRLTEFHKS 527 (534)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887653
No 141
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.8e-21 Score=190.13 Aligned_cols=285 Identities=13% Similarity=0.028 Sum_probs=194.3
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++.+|++++++++|+|+++++..++.+... ||+..|+++.+.|+.+...++..|+ +
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~--------------~g~d~vlv~~P~y~~y~~~~~~~g~---~ 125 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE--------------PGQDSIACFGPTYGMYAISAETFNV---G 125 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC--------------CCCCeEEEcCCChHHHHHHHHHcCC---E
Confidence 3466778888999989999999999999988877643 4533788899999988888899998 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc-CcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY-NMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~-~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+|.++++.+|++.+++ + + ++++|++++|+||||.+.+.+++.++++.. ++++++|++|..+.......
T Consensus 126 v~~v~~~~~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~ 197 (354)
T PRK04635 126 VKALPLTADYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVA 197 (354)
T ss_pred EEEEecCCCCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchH
Confidence 8999998778899988863 3 2 288999999999999999999999999874 79999999997654211100
Q ss_pred cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. .....+. -+++.|++|+++ .+..+|+++.+ ++.+........+|. ......
T Consensus 198 ~--~~~~~~~-~iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~~~-----------------------~~~~~~ 250 (354)
T PRK04635 198 D--LLASYPN-LVVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAPYP-----------------------VPLPVS 250 (354)
T ss_pred H--HHhhCCC-EEEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCCCC-----------------------CCHHHH
Confidence 0 1111111 145669999987 44678998864 445444332211111 011122
Q ss_pred HHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 353 WLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 353 ~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
.+++..+ +.+.+++..++..+.++++.+.|++ ++++++. ++..+.+.+.+ + . ..++.
T Consensus 251 ~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~-~~~g~f~~~~~-~-~----------------~~~~~ 310 (354)
T PRK04635 251 EIATQALSEAGLARMKFQVLDLNAQGARLQAALSM-YGGAKVL-EGNGNYVLAKF-D-D----------------VDAVF 310 (354)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh-CCCceEC-CCCCcEEEEEC-C-C----------------HHHHH
Confidence 2222222 3445566677778888999999999 7668764 55544333322 1 1 12456
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.|.+.|+.+..... .+..+++|+++. +++|+++++++|++.
T Consensus 311 ~~l~~~gv~v~~~~~-~~~~~~lRis~~----~~e~~~~l~~al~~~ 352 (354)
T PRK04635 311 KALWDAGIVARAYKD-PRLANCIRFSFS----NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHCCEEEEECCC-CCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence 677778855543321 222579999942 789999999999864
No 142
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=9.2e-21 Score=185.77 Aligned_cols=286 Identities=14% Similarity=0.085 Sum_probs=196.4
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++++++++|.+++++++|+|+++++..++.+..+ +|+ .|+++.++|+.+...+...|. ++
T Consensus 68 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~--------------~gd-~v~~~~p~y~~~~~~~~~~g~---~~ 129 (359)
T PRK03158 68 ELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLN--------------PGT-NTVMAEPTFSQYRHNAIIEGA---EV 129 (359)
T ss_pred HHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCHHHHHHHHHHcCC---eE
Confidence 456678888898888999999999999877766643 445 788888999999898888888 88
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+.+|.+ ++.+|++++++++++. +++|++++++||||.+.+.++|.++++. +|+++++|++|..+.......
T Consensus 130 ~~~~~~-~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~ 202 (359)
T PRK03158 130 REVPLK-DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYP 202 (359)
T ss_pred EEEecC-CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccc
Confidence 899987 6789999998887653 7889999999999999999999999987 599999999998765421100
Q ss_pred -cCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 274 -RHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 274 -~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
..+..... .-.+++.+++|.++. +..+|+++. +++.++........|. ...+.
T Consensus 203 ~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~-----------------------~~~~~ 257 (359)
T PRK03158 203 DTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIA-SEELIEKLNIARPPFN-----------------------TTRIA 257 (359)
T ss_pred cHHHHHHhc-CCEEEEEechHhhcCcchhhehhcC-CHHHHHHHHHhcCCCC-----------------------CCHHH
Confidence 00011111 234666799999984 467899885 4444444322211110 12333
Q ss_pred HHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 352 LWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 352 ~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
..++...+. .+..++..+...+..+++.+.|.+ . ++.++ ++.. .+.+...+ .. ..++.+
T Consensus 258 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~-~~~g-~~i~~~~~--~~--------------~~~~~~ 317 (359)
T PRK03158 258 QYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE-Y-GLFYY-PSQT-NFIFVDTG--RD--------------ANELFE 317 (359)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeC-CCcC-cEEEEECC--CC--------------HHHHHH
Confidence 334433332 344566666777788889999988 5 77764 4443 34332211 10 235667
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.|.+.|+.+.....+ +..+++|+++. +.+++++++++|+++
T Consensus 318 ~l~~~gv~v~~g~~f-~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 318 ALLKKGYIVRSGAAL-GFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHCCeEEeeCCCC-CCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 777888554443222 33679999943 799999999999876
No 143
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=1.4e-20 Score=185.13 Aligned_cols=290 Identities=16% Similarity=0.072 Sum_probs=197.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|++++++++|+|+++++..++.+..+ +|+ .|+++.++|..+...+...|. ++
T Consensus 71 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~--------------~gd-~vl~~~p~y~~~~~~~~~~g~---~~ 132 (367)
T PRK02731 71 ELKAALAEKFGVDPERIILGNGSDEILELLARAYLG--------------PGD-EVIYSEHGFAVYPIAAQAVGA---KP 132 (367)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEecCCHHHHHHHHHHcCC---eE
Confidence 567778888999878899999999988777665532 445 788888898888887888887 78
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeeccccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~~ 273 (480)
+.+|. +++.+|++++++++++. +++|++++++||||.+.+.++|.++++.+ |+++++|++|..+.......
T Consensus 133 ~~~~~-~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~ 205 (367)
T PRK02731 133 VEVPA-KDYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYE 205 (367)
T ss_pred EEecc-cCCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcc
Confidence 88887 45789999999988643 88999999999999999999999999875 89999999998755321110
Q ss_pred c-CcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 274 R-HPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 274 ~-~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
. ...... ..-.+++.|+.|.++. +.++|+++.. ++..+........+ + ...+.
T Consensus 206 ~~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l~~~~~~~------------~-----------~~~~~ 260 (367)
T PRK02731 206 DGLELVAK-FPNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDALNRVRQPF------------N-----------VNSLA 260 (367)
T ss_pred cHHHHHhh-cCCEEEEeeehHhhcCcccceeeeeCC-HHHHHHHHHccCCC------------C-----------CCHHH
Confidence 0 001111 1123556688999864 4678998864 44444332211111 0 12234
Q ss_pred HHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 352 LWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 352 ~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
.+++...+. .+.+++..++..++.+.+.+.|++ . |+.+. ++....+++.. +.... ..++.+
T Consensus 261 ~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~g~~~~i~~-~~~~~--------------~~~~~~ 322 (367)
T PRK02731 261 LAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE-L-GLEYI-PSVGNFILVDF-DDGKD--------------AAEAYQ 322 (367)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCccC-CCCceEEEEEC-CCCCC--------------HHHHHH
Confidence 444444443 344677778888889999999999 5 77764 44544444433 22111 245677
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.|.+.|+.+...... +..+++|+++ + +.+++++++++|+++++
T Consensus 323 ~L~~~gI~v~~~~~~-~~~~~iRis~-~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 323 ALLKRGVIVRPVAGY-GLPNALRITI-G---TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHCCEEEEeCCCC-CCCCeEEEec-C---CHHHHHHHHHHHHHHHh
Confidence 888888544433222 2246999994 3 78999999999998765
No 144
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=6.2e-21 Score=186.42 Aligned_cols=289 Identities=11% Similarity=0.049 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.+++++++|+|+++++..++.+. . ||+ +++ ..+.+..+...++..|. +
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~--------------~g~-viv-~~P~y~~~~~~~~~~g~---~ 117 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETESIFAVVSGL-K--------------PRR-AMI-VTPGFAEYRRALQQVGC---E 117 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-C--------------CCC-EEE-eCCCcHHHHHHHHHcCC---e
Confidence 46778899999998889999999999988877654 2 434 444 45678788888898888 8
Q ss_pred eEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 195 CVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 195 v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
++.+|.+++ +.+| +++++.+.+ ++++|++++++||||.+.+ +++|+++|+++++++++|++|..+...
T Consensus 118 ~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~ 190 (356)
T PRK08056 118 IRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD 190 (356)
T ss_pred EEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc
Confidence 889988643 4455 345555543 2789999999999999988 888999999999999999999776432
Q ss_pred cccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.... .+.+... ...+++.|++|+++ .+..+|+++..+...+.........+- ..
T Consensus 191 ~~~~-~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~~-----------------------~~ 245 (356)
T PRK08056 191 ETGF-IPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWS-----------------------IN 245 (356)
T ss_pred chHH-HHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCc-----------------------hh
Confidence 1110 0112222 34678889999999 557899998755544443321111110 11
Q ss_pred chHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+...++...+ +.+..++..++..+.++++.+.|++ ++++.+. ++. +.+.|.-.+.. ..+
T Consensus 246 ~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~-~~~-~~~~~~~~~~~----------------~~~ 306 (356)
T PRK08056 246 AFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCA-LPLLTVW-PGR-ANYLFLRCERP----------------DID 306 (356)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEc-CCC-CcEEEEEcCCC----------------hHH
Confidence 22333333333 3445566677788899999999998 7888764 454 44444322211 135
Q ss_pred HHHHHHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.+.|.+.|+.+.....+.+. .+++|+++. +.++.+.++++|+++.+
T Consensus 307 ~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 307 LQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHHc
Confidence 667777888654443333222 469999943 67999999999988754
No 145
>PRK09105 putative aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=184.18 Aligned_cols=285 Identities=14% Similarity=0.065 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++.+|.+++++++|+|+++++..++.+..+ ||+ .|++++++|+.+...++..|.
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~--------------~gd-~Vli~~P~y~~~~~~~~~~g~--- 141 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTS--------------PTA-GLVTADPTYEAGWRAADAQGA--- 141 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcC--------------CCC-EEEEeCCChHHHHHHHHHcCC---
Confidence 34567778899999888999999999999988887754 445 788899999999999999998
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|.++++.+|++++++. .+. +++|++++|+||||.+.+.+++.++++. +++|+++|++|..+... +
T Consensus 142 ~~~~v~~~~~~~~d~~~l~~~-~~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~-~ 213 (370)
T PRK09105 142 PVAKVPLRADGAHDVKAMLAA-DPN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDA-P 213 (370)
T ss_pred eEEEecCCCCCCCCHHHHHhc-CCC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccC-c
Confidence 888999888888999998765 222 7789999999999999998888888764 48999999999654221 1
Q ss_pred cccCcccCCCCCCc-cceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERAD-SVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D-~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.. . .+... ..+ ++..|++|.++. +..+|+++. ++..+...... ..+. ...
T Consensus 214 s~-~-~~~~~-~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~~i~~l~~~-~~~~-----------------------~~~ 265 (370)
T PRK09105 214 SV-V-DLVAQ-RKDLIVLRTFSKLYGMAGMRLGLAAA-RPDLLAKLARF-GHNP-----------------------LPV 265 (370)
T ss_pred ch-H-HHHhh-CCCEEEEecccHhhcCCccceeeeec-CHHHHHHHHhc-CCCC-----------------------cCH
Confidence 00 0 01111 234 444588999974 467899885 44444443221 0000 112
Q ss_pred hHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
....++...+. .+.+++..++..++.+++.+.|++ .++++. ++..+.+.+.. + .. ..++
T Consensus 266 ~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~--~g~~~~-~~~~~f~~~~~-~--~~--------------~~~l 325 (370)
T PRK09105 266 PAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK--KGYKCT-PSQANCFMVDV-K--RP--------------AKAV 325 (370)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH--CCCCcC-CCCCcEEEEeC-C--CC--------------HHHH
Confidence 23333333332 355677778888899999999998 488764 56665554321 1 10 2356
Q ss_pred HHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 429 KGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.|.++|+.+ .. .+.+..+++|+++. +++++++++++|+++.+
T Consensus 326 ~~~L~~~gI~v-~~-~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 326 ADAMAKQGVFI-GR-SWPIWPNWVRVTVG----SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred HHHHHHCCcEE-ec-CCCCCCCeEEEEcC----CHHHHHHHHHHHHHHhh
Confidence 77787887544 22 12222579999943 57899999999988753
No 146
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.89 E-value=4.3e-20 Score=181.79 Aligned_cols=310 Identities=15% Similarity=0.169 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
...++.+.+++++|.+. .+++++|+.|+..++.+..+ ||+ +|++++..|.++...+...+.
T Consensus 44 ~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~~i~~l~~--------------~GD-~Vl~~~~~h~s~~~~~~l~~~-- 104 (392)
T PLN03227 44 AHLELEQCMAEFLGTES--AILYSDGASTTSSTVAAFAK--------------RGD-LLVVDRGVNEALLVGVSLSRA-- 104 (392)
T ss_pred HHHHHHHHHHHHhCCCc--EEEecCcHHHHHHHHHHhCC--------------CCC-EEEEeccccHHHHHHHHHcCC--
Confidence 34455666999999864 67777788888877777543 556 899999999999888877765
Q ss_pred CCeEEeeCCCCCCCCHHHHHHHHHHHHH--------CCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 193 DNCVEVPSDKRGRLIPSELERLVLERKA--------KGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 193 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~--------~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
++++++.+ |++++++.++.... ...++++|+++.+++++|.+.|+++|.++|++||+++++|++|+
T Consensus 105 -~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~ 178 (392)
T PLN03227 105 -NVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFS 178 (392)
T ss_pred -eEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECccc
Confidence 66666665 56666665543321 12357899999999999999999999999999999999999998
Q ss_pred cccccc-ccccCc--ccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 265 GGLLLS-KKYRHP--RLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 265 ~~~~~~-~~~~~~--~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
.+...- ...... .+....++|+++.+++|+++ |. .|+++ .+++...........+.++
T Consensus 179 ~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~-~~~~~~~~~~~~~~~~~~~---------------- 239 (392)
T PLN03227 179 FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTV-GSEEVVDHQRLSGSGYCFS---------------- 239 (392)
T ss_pred ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEe-cCHHHHHHHHHhCcCcccc----------------
Confidence 543311 001010 11112367999999999876 33 24444 4444443322111111111
Q ss_pred cCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe----------cCCceeEEEEEeecCccC
Q psy12303 342 QCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI----------LEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~----------~~~~~~~v~f~~~~~~~~ 410 (480)
.......+++++..+ .....++++++.++++++|.+.|++ .++..+ ..+.+.++.+.+.+....
T Consensus 240 ---~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~ 314 (392)
T PLN03227 240 ---ASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SSHPYALKLRNRLVITSDPISPIIYLRLSDQEAT 314 (392)
T ss_pred ---CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cCCccccccccccccCCCCCCCEEEEEeCCHHHh
Confidence 111222334443322 1112356788889999999999985 232211 223344555543221100
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeee-------eeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQ-------PLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~-------~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. .... .....++.+.+.++|.++.... +... +..+|++ .+..+|++||+++++.|++++++
T Consensus 315 ~----~~~~--~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P-~~~iR~~-~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 315 R----RTDE--TLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVP-PPCLRVV-ANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred h----hhhh--hhHHHHHHHHHHHCCCEEEecccccCCcCCCCC-CceEEEE-ecCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0000 0112467888889996653211 0111 4678999 99999999999999999988754
No 147
>PRK07777 aminotransferase; Validated
Probab=99.89 E-value=3.1e-20 Score=183.82 Aligned_cols=323 Identities=12% Similarity=0.061 Sum_probs=211.4
Q ss_pred HHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--CC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce
Q psy12303 93 LIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--GG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL 169 (480)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~ 169 (480)
+...+......|...++..++++.+.+++.+.+|.+ +. ++++|+|+++|+..++.+... ||+
T Consensus 46 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~--------------~gd- 110 (387)
T PRK07777 46 AQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVE--------------PGD- 110 (387)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcC--------------CCC-
Confidence 333333333456556677888888889988888874 33 699999999999888776543 446
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC---CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---h
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR---GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---I 243 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~---~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l 243 (480)
.|++..+.|..+..++...|. +++.++.+++ +.+|+++|++++++. +++|++++++||||.+.+ +
T Consensus 111 ~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~ 181 (387)
T PRK07777 111 EVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAAEL 181 (387)
T ss_pred EEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHHHH
Confidence 788888899999888898887 7788888653 579999999988654 889999999999999854 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccc-cCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKY-RHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
++|.++|++|++++++|++|+...+..... ....+.+..+.++++.|++|.++.| ..+|+++.. ...+...... ..
T Consensus 182 ~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~l~~~~~~~-~~ 259 (387)
T PRK07777 182 AAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP-APLIAAVRAA-KQ 259 (387)
T ss_pred HHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC-HHHHHHHHHH-Hh
Confidence 899999999999999999998765422110 0001122234578889999999844 668988754 3343332211 11
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS 401 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~ 401 (480)
+.... .+ ......+...+. .+...+++..+...+.++++.+.|++ . ++++. +|..+.++
T Consensus 260 ~~~~~----------------~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~g~~~~ 318 (387)
T PRK07777 260 YLTYV----------------GG-APFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAE-A-GFEVH-DSAGTYFL 318 (387)
T ss_pred hcccC----------------CC-CHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHh-C-CCCcc-CCCcceEE
Confidence 11000 00 011111111122 23456677778888899999999998 4 77764 56666555
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeee-eC----CcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQP-LN----DLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~-~~----~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
|.-.+. ....+ ..++.+.|.+ .|+. +.++. +. ...+++|+++. ..++++++.+++|++
T Consensus 319 ~~~~~~-~~~~~-----------~~~~~~~l~~~~gv~-v~pg~~f~~~~~~~~~~~Ri~~~---~~~~~l~~~l~~l~~ 382 (387)
T PRK07777 319 CADPRP-LGYDD-----------GTEFCRALPERVGVA-AIPMSVFYDPADAWNHLVRFAFC---KRDDTLDEAIRRLRA 382 (387)
T ss_pred Eecccc-cCCCC-----------HHHHHHHHHHhCCEE-EeCchHhCCCCcCCCCeEEEEec---CCHHHHHHHHHHHHH
Confidence 532221 10000 2356677754 5644 44332 21 11468999953 369999999999988
Q ss_pred hhc
Q psy12303 476 LGH 478 (480)
Q Consensus 476 ~~~ 478 (480)
+..
T Consensus 383 ~~~ 385 (387)
T PRK07777 383 LRG 385 (387)
T ss_pred Hhc
Confidence 653
No 148
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-20 Score=185.24 Aligned_cols=290 Identities=13% Similarity=0.100 Sum_probs=199.3
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++++++++|+++.++++|+|+++++..++.+... ||+ .|++..++|+.+...++..|+ ++
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~--------------~gd-~vli~~P~y~~~~~~~~~~g~---~~ 136 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSEDLIAVICRAVLR--------------PGD-RVVTLYPSFPLHEDYPTMMGA---RV 136 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCChHHHHHHHHHcCC---eE
Confidence 577788999999888999999999998877776643 545 788888999988888899888 88
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+.++.++++.+|++++++++++. +++|++++++||||.+.+.+++.++++. .++++++|++|..+.. ....
T Consensus 137 ~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~-~~~~ 209 (371)
T PRK05166 137 ERVTVTPDLGFDLDALCAAVARA------PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA-GDDY 209 (371)
T ss_pred EEeecCCCCCCCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-CcCc
Confidence 99999888899999999988764 7889999999999999998777777764 4789999999987662 1111
Q ss_pred cC--cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 274 RH--PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 274 ~~--~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
.. ..+.....--+++.|+.|.++ .+..+|++++.++............+. ...+
T Consensus 210 ~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~-----------------------~~~~ 266 (371)
T PRK05166 210 PSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFN-----------------------VNGA 266 (371)
T ss_pred ccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCC-----------------------CCHH
Confidence 11 011111112356779999998 557899988766665544332211110 1122
Q ss_pred HHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
...+++..+ ..+.+++..+...+..+++.+.|++ . |+.+ .++. +.+.+.-.+.. ..++.
T Consensus 267 ~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~-~p~~-g~fl~~~~~~~----------------~~~l~ 326 (371)
T PRK05166 267 AQAAALAALDDEEHLAKGVALALAERERLKKELAE-M-GYRI-APSR-ANFLFFDARRP----------------ASAVA 326 (371)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-cCee-CCCc-CCEEEEeCCCC----------------HHHHH
Confidence 222222222 2455777778888888999999999 5 7775 3444 44433211110 23567
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.|.++|+.+. +....+..+++|+++. +.++.+++++.|+++..
T Consensus 327 ~~l~~~gi~v~-p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 327 EALLRQGVIVK-PWKQPGFETFIRVSIG----SPEENDHFVAALDKVLE 370 (371)
T ss_pred HHHHHCCeEEe-cCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHhh
Confidence 78888885444 3322333679999954 57889999999887653
No 149
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.89 E-value=1.5e-20 Score=186.32 Aligned_cols=308 Identities=14% Similarity=0.146 Sum_probs=198.7
Q ss_pred hhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
|....+...+.+++.+++++++|.+. . +++++|+++++.++.++.+ ||+ +|+++...|+++..
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~-~-i~~~sG~~a~~~a~~~~~~--------------~gd-~vi~~~~~~~~~~~ 132 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEA-A-LVFQSGFNTNQGVLSALLR--------------KGD-IVLSDELNHASIID 132 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCc-E-EEECcHHHHHHHHHHHhCC--------------CCC-EEEEEccccHHHHH
Confidence 33344556788889999999999753 3 4555568888888776643 556 78888899999988
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
++...|. ++..++ .+|++++++.+++... .++++|++++.++++|.+.|+++|.++|++||+++++|++|
T Consensus 133 ~~~~~g~---~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~ 202 (385)
T TIGR01825 133 GLRLTKA---TKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAH 202 (385)
T ss_pred HHHhcCC---ceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcc
Confidence 8887776 555443 4789999988876421 24789999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 264 GGGLLLSKKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
+.+.+...........++ .+.|+++.+++|+++.+ + |+++ .+++...........|....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~~~-~~~~~~~~~~~~~~~~~~~~---------------- 263 (385)
T TIGR01825 203 GSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV-G-GYAA-GHKELIEYLKNRARPFLFST---------------- 263 (385)
T ss_pred cccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC-C-CEEe-cCHHHHHHHHHhCccccccC----------------
Confidence 776542111000000111 25788889999999753 2 6555 44444444322111121110
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
.+......++..+++.+. ...+..++..++++++.+.|++ .|+++. .+....+.+.. +.. .
T Consensus 264 ~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~~~~~~~-~~~------------~- 324 (385)
T TIGR01825 264 AQPPAVVAALAAAVDELQ--RSPELMERLWDNTRFFKAGLGK--LGYDTG-GSETPITPVVI-GDE------------K- 324 (385)
T ss_pred CCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH--cCCCCC-CCCCCEEEEEE-CCH------------H-
Confidence 000011123333343321 1234567778889999999998 488765 34444443332 111 0
Q ss_pred hhhHHHHHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 423 EITPILKGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...++.+.|.++|+.. ....+.. ...++|++ ++..++++||++++++|++++++
T Consensus 325 -~~~~~~~~L~~~gi~v-~~~~~~~~~~~~~~iRi~-~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 325 -AAQEFSRRLFDEGIFA-QSIVFPTVPRGTARIRNI-PTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred -HHHHHHHHHHHCCcEE-cccCCCCCCCCCceEEEE-EcCCCCHHHHHHHHHHHHHHHHH
Confidence 0245778888887543 3221111 13689999 88889999999999999998764
No 150
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.89 E-value=2.4e-21 Score=187.16 Aligned_cols=303 Identities=14% Similarity=0.079 Sum_probs=199.8
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEECCC-hhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe--cCCCchhHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSILAPG-GSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT--SDQCHYSVR 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~g-gt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~--~~~~h~s~~ 182 (480)
++-+.++-+++++.++++++.+. ..+++++| ||+|+..++..... +|+.+.++ ....| .+.
T Consensus 32 ~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~--------------~~~~~l~i~~G~fg~-r~~ 96 (349)
T TIGR01364 32 SKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA--------------EGKVADYIVTGAWSK-KAA 96 (349)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC--------------CCCeEEEEECCHHHH-HHH
Confidence 35556888889999999999843 56777766 99999888876643 22322222 22223 245
Q ss_pred HHHHHcCCCCCCeEEeeCCCC----CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKR----GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~----~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
..++.+|+ +..+..++. -.+++++++. ++ .+++|.+++..|.||...| ++++.++++++
T Consensus 97 ~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~i 159 (349)
T TIGR01364 97 KEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLV 159 (349)
T ss_pred HHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEE
Confidence 66666665 233343322 2455555542 22 3889999999999999876 67777899999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
||++++.+..+.+..++ |++++++||+++ |.|.|+++++++.+ ....+..+.|. .... ... .
T Consensus 160 VDavss~g~~~id~~~~---------d~~~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~-~~~~----~~~--~ 221 (349)
T TIGR01364 160 ADMSSNILSRPIDVSKF---------GLIYAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSML-NYKI----HAE--N 221 (349)
T ss_pred EEccccccCccCCHHHc---------cEEEEecccccC-CCceEEEEECHHHH-hhcccCCCCcc-hHHH----HHh--c
Confidence 99999999988876544 699999999986 99999999877543 33322222221 1000 000 0
Q ss_pred ccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-C--ce-eEEEEEeecCccCCC
Q psy12303 339 KVIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-P--EM-VNVSFWYLPTRVRNM 412 (480)
Q Consensus 339 ~~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~--~~-~~v~f~~~~~~~~~~ 412 (480)
.....+-+ ....++..+++.+-.+ |++++.+++.++++++++.|++ ++|+..... + .. .+++|.+....
T Consensus 222 ~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~gl~~~~~~~~~rs~~v~sf~~~~~~---- 296 (349)
T TIGR01364 222 DSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN-SNGFYRNPVDPRNRSRMNVVFTLGNEE---- 296 (349)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCeeccCCCHHHcCCeEEEEecCChh----
Confidence 01111111 2445666777777777 6999999999999999999999 888765532 2 22 33555422110
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+ ..++.+.+.++|. ++..... . .+.+|+| +.+++|++||+++++.|+++.++
T Consensus 297 --------~---~~~~~~~~~~~Gi-~~~~~~~-~-~g~vRvS-~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 297 --------L---EKRFLKEAEERGL-VSLKGHR-S-VGGMRAS-IYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred --------H---hHHHHHHHHHCCC-cccCCcc-c-cCeeEEE-CcCCCCHHHHHHHHHHHHHHHHh
Confidence 1 1355577888886 4433221 1 3689999 78999999999999999997653
No 151
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=1.9e-20 Score=187.79 Aligned_cols=303 Identities=13% Similarity=0.080 Sum_probs=203.3
Q ss_pred hhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
|....+..++.+.+.+|+.+.++ ++.++++|+|+++++..++.+..+ ||+ .|++..++|+.+..
T Consensus 117 Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l~~--------------pgd-~Vlv~~P~y~~~~~ 180 (431)
T PRK15481 117 YGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAHLL--------------PGD-SVAVEDPCFLSSIN 180 (431)
T ss_pred cCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHhCC--------------CCC-EEEEeCCCcHHHHH
Confidence 43333445555555555554333 345899999999999999887754 556 78889999999999
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEec-cCCCccccccChH---HHHHHHHHc-CcEEE
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCT-SGTTVLGAFDPIE---EIADICQKY-NMWLH 258 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~-~~~~~~G~~~~l~---~I~~i~~~~-~~~l~ 258 (480)
.++..|+ +++.+|.++++ +|+++|++++++. +++++++ +++||||.+.+.+ +|.++|+++ ++|++
T Consensus 181 ~~~~~g~---~~~~v~~~~~g-~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii 250 (431)
T PRK15481 181 MLRYAGF---SASPVSVDAEG-MQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVI 250 (431)
T ss_pred HHHHcCC---eEEeeccCCCC-CCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEE
Confidence 9999998 88899987665 8999999988653 7777776 9999999998875 999999999 99999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
+|++|+..... + ... .+.....--+++.|++|.++.+..+|+++. ++................
T Consensus 251 ~De~Y~~~~~~-~-~~~-~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~-~~~~~~~~~~~~~~~~~~------------- 313 (431)
T PRK15481 251 IDDHFALLSSS-P-YHS-VIPQTTQRWALIRSVSKALGPDLRLAFVAS-DSATSARLRLRLNSGTQW------------- 313 (431)
T ss_pred ecCchhhhccC-C-CCC-CCcCCCCCEEEEeeeccccCCCceeEEEeC-CHHHHHHHHHHHhccccC-------------
Confidence 99999876431 1 111 121111223667799999996678998775 444443332111100000
Q ss_pred ccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAK--G--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~--g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
...+...++...+ + .+.+++..+...+..+.+.+.|++ . ++++ ..|..++++|...+..
T Consensus 314 --------~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~-~-~~~~-~~p~gg~f~~~~l~~~------ 376 (431)
T PRK15481 314 --------VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ-Y-GIAI-PSPGDGLNLWLPLDTD------ 376 (431)
T ss_pred --------CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcc-ccCCCeEEEEEECCCC------
Confidence 1222333333333 2 223566778888888999999998 4 7765 3566777766443321
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC--CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLN--DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~--~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.+.|+.+.....+. +..+++|+++.. .++++++.+++.|.+++.
T Consensus 377 ----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 ----------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred ----------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 1345667777886655433331 113689999544 368999999999998764
No 152
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.89 E-value=4.5e-20 Score=183.42 Aligned_cols=327 Identities=11% Similarity=0.061 Sum_probs=210.8
Q ss_pred HHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...+... ...|...++..++.+++.+++.+. | +++.++++|+|+++|+..++.+..+
T Consensus 53 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~-------------- 117 (401)
T TIGR01264 53 VMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALAN-------------- 117 (401)
T ss_pred HHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCC--------------
Confidence 334554444332 233544555566666666666542 2 4567899999999999988887753
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
||+ .|+++.++|..+...++..|+ +++.++++. ++.+|++.|++++++. +++|++++++||||.+.+
T Consensus 118 ~gd-~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~ 187 (401)
T TIGR01264 118 AGQ-NILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSR 187 (401)
T ss_pred CCC-EEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCH
Confidence 445 788888899889899999998 778887753 5789999999887654 788999999999999965
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC-CC-ccceeCcccc-CCCcccceEEEEeCc-----hhh
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE-RA-DSVTWNPHKL-MGTLLQCSTIHFKQD-----GLL 312 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~~-D~~~~s~hK~-~~~p~~~g~~~~~~~-----~~~ 312 (480)
+++|.++|+++|+++++|++|.......... . .+..+. .. -+++.|++|. +..+..+|++++.+. ..+
T Consensus 188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~-~-~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~ 265 (401)
T TIGR01264 188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATF-E-PLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIR 265 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEEhhhhhhccCCccc-c-cHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHH
Confidence 7889999999999999999998765422111 0 111111 11 2567799997 455578999997642 122
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQ---WRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~---l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
........... + ...+...+. +.....+.+++..++..+..+++.+.|++ ++++
T Consensus 266 ~~~~~~~~~~~-~---------------------~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~-~~~~ 322 (401)
T TIGR01264 266 DGLVKLSQRIL-G---------------------PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA-VPGL 322 (401)
T ss_pred HHHHHHhhccC-C---------------------CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 11111000000 0 011222222 22222456777788888889999999999 7787
Q ss_pred EEecCCceeEEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHH
Q psy12303 390 YLILEPEMVNVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 390 ~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~ 467 (480)
.+ ..|..++++|...+.. ..+. .+ ..++.+++. +.|+.+.....+ +..+++|+++. ..+++++
T Consensus 323 ~~-~~p~~g~f~~~~~~~~~~~~~--------~~--~~~~~~~l~~~~gI~v~pg~~f-~~~~~iRis~~---~~~~~l~ 387 (401)
T TIGR01264 323 RP-VMPSGAMYMMVGIEMEHFPEF--------KN--DVEFTERLVAEQSVFCLPGSCF-EYPGFFRVVLT---VPVVMME 387 (401)
T ss_pred cc-cCCCeeeEEEEEecccccCCC--------CC--HHHHHHHHHHhCCEEEeCchhc-CCCCeEEEEEc---CCHHHHH
Confidence 65 3577777766543211 0000 00 134556665 567554433333 33679999954 3589999
Q ss_pred HHHHHHHHhhccC
Q psy12303 468 FLLTEMDRLGHDL 480 (480)
Q Consensus 468 ~~~~~l~~~~~~l 480 (480)
..+++|.++++++
T Consensus 388 ~~l~rl~~~~~~~ 400 (401)
T TIGR01264 388 EACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999887653
No 153
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.6e-20 Score=184.16 Aligned_cols=324 Identities=13% Similarity=0.136 Sum_probs=204.4
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHH-hCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQI-IGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~-~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
+.+.+..... ....|....+..++.+++.+++... .++++.++++|+|+|+|+..++.+..+ ||
T Consensus 48 ~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~g 112 (397)
T PRK07568 48 FFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICD--------------PG 112 (397)
T ss_pred HHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcC--------------CC
Confidence 3344544332 2234544445566666666655421 145667899999999999988876643 55
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CC-C-CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RG-R-LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~-~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
+ .|+++.+.|..+...++..|. +++.++.+. ++ . .++++|++++++. +++|++++++||||.+.+
T Consensus 113 d-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~ 182 (397)
T PRK07568 113 D-EILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGVVYTKE 182 (397)
T ss_pred C-EEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCccCCHH
Confidence 6 677777888777777788887 788888863 33 3 3578898888654 889999999999999875
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCc-ccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCC
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHP-RLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMS 319 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~ 319 (480)
+++|.++|+++|+++++|++|+.+.......... .+.+...--+++.|++|.++. +..+|+++..++..........
T Consensus 183 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 262 (397)
T PRK07568 183 ELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLC 262 (397)
T ss_pred HHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHh
Confidence 7889999999999999999998765422111110 111111122566799999875 5789998876555544322111
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM 397 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~ 397 (480)
...+ . ...+...++...+ +.+.+++..+...+.++.+.+.|++ ++++.+ ..|..
T Consensus 263 ~~~~-~---------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~~p~g 318 (397)
T PRK07568 263 QARL-S---------------------PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK-IPGVVC-EKPKG 318 (397)
T ss_pred hccC-C---------------------CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcee-cCCCc
Confidence 0000 0 1111222222222 4556777788888899999999998 778775 45666
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh------cccEEEeeeee---CC-cccEEEEecccCCCCHHHHH
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ------AGTMMVGYQPL---ND-LPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~------~g~~~~~~~~~---~~-~~~~~R~~~~~~~~t~~di~ 467 (480)
+.++|.-.+.. + ..++.+.+.+ .|+.+.+...+ .+ ..+++|+++. .++++++
T Consensus 319 ~~~~~~~l~~~----~-----------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~---~~~~~~~ 380 (397)
T PRK07568 319 AFYIIAKLPVD----D-----------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV---LNEEDLK 380 (397)
T ss_pred ceEEEEecCCC----C-----------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe---CCHHHHH
Confidence 66554322211 1 1234444543 45444432222 11 1469999953 3579999
Q ss_pred HHHHHHHHhhcc
Q psy12303 468 FLLTEMDRLGHD 479 (480)
Q Consensus 468 ~~~~~l~~~~~~ 479 (480)
..++.|.+.+++
T Consensus 381 ~~~~~l~~~l~~ 392 (397)
T PRK07568 381 RAMEILKEALEK 392 (397)
T ss_pred HHHHHHHHHHHH
Confidence 999999887653
No 154
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.89 E-value=5.5e-20 Score=182.49 Aligned_cols=323 Identities=10% Similarity=0.004 Sum_probs=208.6
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC---CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW---QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~---~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...++ ....|....+..++.+.+++++.+.+|. ++ .++++|+|+++++..++.+..+. .|
T Consensus 47 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~-------~~--- 115 (396)
T PRK09147 47 IKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDR-------DG--- 115 (396)
T ss_pred HHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCC-------CC---
Confidence 3345544443 2344655556678888888999888784 44 47999999999999888877541 00
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
.|+ .|+++.+.++.+..++..+|. +++.||+++ ++.+|++++++.+.+. +++|++++|+||||.+.+
T Consensus 116 -~gd-~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~~s 184 (396)
T PRK09147 116 -PGP-LVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAVLP 184 (396)
T ss_pred -CCC-EEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCccCC
Confidence 145 788899999999999999998 889999864 3689999999887654 889999999999999965
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccCcccC---CC--C--CCccceeCccccC-CCcccceEEEEeCchh
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLT---GI--E--RADSVTWNPHKLM-GTLLQCSTIHFKQDGL 311 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~--~--~~D~~~~s~hK~~-~~p~~~g~~~~~~~~~ 311 (480)
+++|.++|++|++||++|++|+...+.......+... .. . .--+++.|++|.+ ..+..+|+++.. +.+
T Consensus 185 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~~l 263 (396)
T PRK09147 185 LDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-AAL 263 (396)
T ss_pred HHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-HHH
Confidence 7888888999999999999998865422100000010 01 0 1126677999965 544789998754 444
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
++...... .+... ....+...+++..+ ..+.+.+..+...+.++.+.+.|.+ . +.
T Consensus 264 ~~~~~~~~-~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~--~~ 319 (396)
T PRK09147 264 LKKFLLYR-TYHGC--------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAP-V--LD 319 (396)
T ss_pred HHHHHHHh-hhccc--------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH-h--cC
Confidence 44332111 11000 01122222222222 2345666777777888888888877 3 44
Q ss_pred EecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC-------CcccEEEEecccCCCC
Q psy12303 391 LILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN-------DLPNFFRNIISSAAVT 462 (480)
Q Consensus 391 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~-------~~~~~~R~~~~~~~~t 462 (480)
+ ..|..+.++|...+ .. ..++.+.+. +.|+.+.....+. ...+++|+++.. +
T Consensus 320 ~-~~p~~g~f~~~~~~--~~--------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~---~ 379 (396)
T PRK09147 320 V-QLPDAGFYLWAKVP--GD--------------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA---P 379 (396)
T ss_pred C-CCCCeeEEEEEECC--CC--------------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---C
Confidence 3 35777777665443 11 124556664 4575444332211 114799999543 5
Q ss_pred HHHHHHHHHHHHHhhc
Q psy12303 463 EGDIDFLLTEMDRLGH 478 (480)
Q Consensus 463 ~~di~~~~~~l~~~~~ 478 (480)
++++++.+++|++.++
T Consensus 380 ~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 380 LAECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7899999999988753
No 155
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=4.2e-20 Score=182.24 Aligned_cols=314 Identities=15% Similarity=0.109 Sum_probs=199.4
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.+. .++++|||+|+..++.++.-. ||+ .|+++..+|.++..++...|+ ++
T Consensus 33 ~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~-------------~Gd-~Viv~~~~~~~~~~~~~~~G~---~~ 93 (380)
T TIGR03588 33 AFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG-------------PGD-RVWTTPITFVATANCALYCGA---KV 93 (380)
T ss_pred HHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC-------------CCC-EEEeCCcchHHHHHHHHHcCC---EE
Confidence 34555888888864 677778999999888766211 556 799999999999999998888 88
Q ss_pred EEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 196 VEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 196 ~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+++++++ ++.+|++++++++++. ...++++|++++ ++|...|+++|.++|++||+++++|++|+.+... +...
T Consensus 94 ~~~~~~~~~~~~d~~~l~~~i~~~--~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~-~~~~ 167 (380)
T TIGR03588 94 DFVDIDPDTGNIDEDALEKKLAAA--KGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEY-GGKP 167 (380)
T ss_pred EEEecCCCcCCcCHHHHHHHhhcc--cCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCcc-CCEe
Confidence 9999864 6789999999999732 111278888654 5799999999999999999999999999987652 2222
Q ss_pred CcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCc-cccccccc-----ccCcccCCCCccccCCCC
Q psy12303 275 HPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSA-EYLFMQDK-----LYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~-~~l~~~~~-----~~~~~~~~~~~~~~~~r~ 346 (480)
. ......|+.++|+| |++..| ..|+++++++........... ........ .....++.+. +....+
T Consensus 168 ~---g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~n~~ 241 (380)
T TIGR03588 168 V---GNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQE--LGFNYR 241 (380)
T ss_pred C---CCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeec--cccccC
Confidence 2 11124599999988 898765 456666677655543321100 00000000 0000011111 111222
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce-----eEEEEEeecCccCCCchhhHHHHh
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM-----VNVSFWYLPTRVRNMPHEKRLNIL 421 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~-----~~v~f~~~~~~~~~~~~~~~~~~l 421 (480)
..-+.+...+.. .+.++++.++.+++++++.+.|.+ ++++.++.++.. ..+.+.+... .+..
T Consensus 242 m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~-------- 308 (380)
T TIGR03588 242 MTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKD-LPYFTPLTIPLGSKSAWHLYPILLDQE--FGCT-------- 308 (380)
T ss_pred ccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcC-CCCccCCCCCCCCEeEEEEEEEEECCc--CCCC--------
Confidence 333333333333 456788999999999999999999 888775543211 1122222111 1111
Q ss_pred hhhhHHHHHHHHhcccEEEe-eeee----------CC--c-------ccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 422 GEITPILKGRMMQAGTMMVG-YQPL----------ND--L-------PNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 422 ~~~~~~i~~~l~~~g~~~~~-~~~~----------~~--~-------~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.+.|.+.|+.... +.+. .. . ...+++. +++..|++||+++++.|++++
T Consensus 309 ---r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 309 ---RKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLP-LHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred ---HHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcC-CCCCCCHHHHHHHHHHHHHhC
Confidence 23566677777753210 0000 00 0 2578888 889999999999999998863
No 156
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.5e-20 Score=183.22 Aligned_cols=294 Identities=13% Similarity=0.024 Sum_probs=201.3
Q ss_pred hhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 108 PVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
++...+.+.+.+++.+..|. +++++++|+|+++++..++.+..+ ||+ .|++..++|+.+..++
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~--------------~gd-~v~v~~P~y~~~~~~~ 129 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGG--------------PGR-TALGFVPSYSMHPIIA 129 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcC--------------CCC-EEEEeCCChHHHHHHH
Confidence 45566777777777776664 667899999999999998887764 556 7888889999999988
Q ss_pred HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 186 AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 186 ~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
...|. +++.++.++++.+|++++++++++. ++++|++++++||||.+.+.+++.++++.+++++++|++|+.
T Consensus 130 ~~~g~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~ 201 (368)
T PRK03317 130 RGTHT---EWVEGPRAADFTLDVDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAE 201 (368)
T ss_pred HhcCC---eeEEcccCCCCCCCHHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchh
Confidence 88777 6777877777889999999998742 267888999999999999999999999999999999999997
Q ss_pred cccccccccCcccCCCCCCc-cceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 266 GLLLSKKYRHPRLTGIERAD-SVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D-~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+............. . ..+ +++.|++|.++. +..+|+++. +++..........+|.
T Consensus 202 ~~~~~~~~~~~~~~-~-~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~-------------------- 258 (368)
T PRK03317 202 FRRSGTPSALTLLP-E-YPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPYH-------------------- 258 (368)
T ss_pred hcccCCcCHHHHHH-h-CCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCCC--------------------
Confidence 64321110000111 1 123 455599999974 467898885 4455444332111110
Q ss_pred CCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 344 GRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
...+...++...+ ..+.+.+.+++..+..+++.+.|++ .|+.+. ++..+.+.|...+ .
T Consensus 259 ---~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~~~~~~~~~-~-------------- 317 (368)
T PRK03317 259 ---LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE--LGLRVA-PSDANFVLFGRFA-D-------------- 317 (368)
T ss_pred ---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH--CCCEeC-CCCCcEEEEeccC-C--------------
Confidence 1122222222222 1234555667777888889999988 488764 5655555442111 0
Q ss_pred hhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 423 EITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.++|+.+... +..+++|+++. +.++++++++.|+++++
T Consensus 318 --~~~~~~~l~~~Gv~v~~~----~~~~~iRi~~~----~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 318 --RHAVWQGLLDRGVLIRDV----GIPGWLRVTIG----TPEENDAFLAALAEVLA 363 (368)
T ss_pred --HHHHHHHHHHCCEEEEeC----CCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 235667788888554332 22579999943 67899999999998764
No 157
>KOG0256|consensus
Probab=99.88 E-value=9.6e-21 Score=174.25 Aligned_cols=321 Identities=14% Similarity=0.148 Sum_probs=225.3
Q ss_pred hhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 108 PVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
.+...+.+++++.+.+.-| +++..+++++|+|.||.+.+.++.+ ||+ ..+++.+.++.+..
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad--------------pgd-afLvPtPyY~gfdr 185 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD--------------PGD-AFLVPTPYYPGFDR 185 (471)
T ss_pred cCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC--------------CCc-eeeecCCCCCcccc
Confidence 4445667777777777766 3678899999999999988888766 766 89999999999988
Q ss_pred HHHHc-CCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEE
Q psy12303 184 CAAVC-GLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWL 257 (480)
Q Consensus 184 ~~~~~-g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l 257 (480)
-+++. |+ ++++|.+.+ +++++.++||+++.+.++.|.+++.|++++|+||.|++.+ |..+...|+++|+.+
T Consensus 186 dl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 186 DLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred cceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 77775 44 788887764 5799999999999999999999999999999999999965 677778889999999
Q ss_pred EeeccccccccccccccCcccC---CCC-CCcc--ceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLT---GIE-RADS--VTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~---~~~-~~D~--~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++|++|++..+..+.+.. .+. ..+ ..|. ++++.+|-+|.| ...|+++..++.....+.....-++.....
T Consensus 263 I~DEIya~sVF~~~~F~S-v~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~t-- 339 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRS-VLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQT-- 339 (471)
T ss_pred EeehhhcccccCccCceE-HHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHH--
Confidence 999999998875544432 111 111 2233 567899999988 679999998887766544322222211100
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~ 410 (480)
-..++..++=..+-.+.+.+..+|....-+++.+.|++ .|+..+ +...+.+||......+.
T Consensus 340 ----------------Q~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~--lgI~cl-~s~AGlF~wvDlr~lL~ 400 (471)
T KOG0256|consen 340 ----------------QYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKA--LGIPCL-KSNAGLFCWVDLRKLLT 400 (471)
T ss_pred ----------------HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHh--cCCcee-ecCCeeEEEEEhHHhcC
Confidence 01112222223344566677777888888899999999 799986 67889999875544433
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC--CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN--DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~--~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.. .+..++ ++++++...-.+.++++... ..++|+|+||.+ +.++.++-.+++|+..+.
T Consensus 401 s~---tfe~El-----~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 401 SL---TFEGEL-----ELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred cC---ChHHHH-----HHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHH
Confidence 22 122222 45666666633445543221 127899999754 456666668888877653
No 158
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=188.41 Aligned_cols=305 Identities=15% Similarity=0.058 Sum_probs=199.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEEC-CChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSILA-PGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~t-~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
++-+.++.+++++.+++++|.++ ..++++ ++||.++..++...... |. + ..+|+.....|- +...
T Consensus 43 ~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~--------g~---~-~l~i~~G~fg~r-~~~~ 109 (360)
T PRK05355 43 SKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGG--------GK---K-ADYVDTGSWSKK-AIKE 109 (360)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCC--------CC---e-EEEEECCHHHHH-HHHH
Confidence 45556888899999999999843 456555 56666666665554431 11 1 113333333333 4566
Q ss_pred HHHcCCCCCCeEEeeCCC-CCCCCHHHHHH-HHHHHHHCCCccEEEEeccCCCcccccc-ChHHHHHHHHHcCcEEEeec
Q psy12303 185 AAVCGLGTDNCVEVPSDK-RGRLIPSELER-LVLERKAKGDIPFFVNCTSGTTVLGAFD-PIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~-~i~~~~~~~~~~~~v~~~~~~~~~G~~~-~l~~I~~i~~~~~~~l~vD~ 261 (480)
++..|. . ..++.++ .+..+..++++ +++++ +++|.+++..|.||... |+++| +|++++||+
T Consensus 110 a~~~g~---~-~~~~~~~~~g~~~~~~~~~~~l~~~------~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDa 173 (360)
T PRK05355 110 AKKYGE---V-NVAASSEDDGFTYIPPLDEWQLSDD------AAYVHYTSNETIDGTEFHELPDT------GDVPLVADM 173 (360)
T ss_pred HHHhCC---c-eEEecccccCCCCCCChhhccCCCC------CCEEEEccCCCcceEecCccccc------CCCcEEEEc
Confidence 677774 3 4455443 45555555555 66543 78999999999999997 77777 899999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+++.+..+.+..++ |++++++||+++ |.|.|+++++++.+ ....+..+.|+...... ... ..
T Consensus 174 vss~g~~~idv~~~---------d~~~~ssqK~lg-P~Glg~l~~s~~~l-~~~~~~~~~~~~~~~~~-----~~~--~~ 235 (360)
T PRK05355 174 SSDILSRPIDVSKF---------GLIYAGAQKNIG-PAGLTIVIVREDLL-GRALPSIPSMLDYKTHA-----DND--SM 235 (360)
T ss_pred CccccCccCCHHHc---------cEEEEecccccc-CCceEEEEECHHHH-hhcccCCChHHHHHHHH-----hcC--Cc
Confidence 99999988876544 699999999986 99999999987643 33322112222111000 000 01
Q ss_pred cCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ce-eEEEEEeecCccCCCchhh
Q psy12303 342 QCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EM-VNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 342 ~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~-~~v~f~~~~~~~~~~~~~~ 416 (480)
+.+-+ ....++..+++.+-.+ |++++.+++.++++++++.|++ ++.+..+.++ .+ .+++|... ...
T Consensus 236 ~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~v~sf~~~-~~~------- 306 (360)
T PRK05355 236 YNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS-SDFYRNPVAPEDRSRMNVPFTLA-DEE------- 306 (360)
T ss_pred cCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCChhhcCCcEEEEEcC-ChH-------
Confidence 11111 2445666777777677 7999999999999999999999 6633332222 23 34666432 110
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+ ..++.+.+.+.|..+ .. .... .+.+|+| +.+++|++||+++++.|+++++
T Consensus 307 ----~---~~~~~~~~~~~Gi~~-~~-~~~~-~g~vRiS-~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 307 ----L---DKKFLAEAKAAGLVG-LK-GHRS-VGGMRAS-IYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ----H---HHHHHHHHHHCCCcc-cC-CCCc-cCcEEEE-CCCCCCHHHHHHHHHHHHHHHH
Confidence 1 134557777888664 32 2222 4689999 7899999999999999999765
No 159
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.88 E-value=7.3e-20 Score=181.22 Aligned_cols=324 Identities=11% Similarity=0.056 Sum_probs=210.2
Q ss_pred HHHHHHHc-CcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 90 GEWLIATA-NTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 90 ~~~l~~~~-~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+...+ +.....|...++..++.+++.+|+.+..|. +++ ++++|+|+++++..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~-------------- 114 (388)
T PRK07366 49 LEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLN-------------- 114 (388)
T ss_pred HHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCC--------------
Confidence 34444333 233344655566678888888888887774 555 699999999999988877654
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
||+ .|++..++++.+...++..|. +++.+|.+++ +.+|++++++.+.+. +++|++++++||||.+.+
T Consensus 115 ~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s~ 184 (388)
T PRK07366 115 PGD-FALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAPL 184 (388)
T ss_pred CCC-EEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCCH
Confidence 556 788899999999999999998 8889998753 567888888777543 789999999999999976
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCC---CccceeCccccCC-CcccceEEEEeCchhhHhhh
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER---ADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~---~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~ 316 (480)
+++|.++|++||+||++|++|.......... .+.+...+. .-+++.|++|.++ .+..+|+++. +++++....
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~l~ 262 (388)
T PRK07366 185 SFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVE-PPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQALR 262 (388)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhcccCCCCC-CCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHHHHHH
Confidence 5677778999999999999998775422110 111111111 1245679999996 4478999885 555554432
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
.....+.... . ......+...+.. ..+.+++..+...+..+++.+.|++ . ++.+ ..|.
T Consensus 263 ~~~~~~~~~~------------~------~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~-~-~~~~-~~p~ 320 (388)
T PRK07366 263 QVKAVVDFNQ------------Y------RGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQ-I-GWPV-PLPE 320 (388)
T ss_pred HHHhhcccCC------------C------HHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc-cCCC
Confidence 2111111000 0 0000011122211 2456777888888899999999998 5 7764 3566
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.++++|...+..... + ..++.+.+. +.|+.+.....+... .+++|+++. .+++++++.+++|+
T Consensus 321 ~g~f~~~~~~~~~~~-~-----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~ 385 (388)
T PRK07366 321 ATMYVWAKLPEPWQG-N-----------SVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV---HDPDILEEAVERIA 385 (388)
T ss_pred eeEEEEEECCcccCC-C-----------HHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence 777666444332110 0 124555554 557544443222221 479999954 36899999999998
Q ss_pred Hh
Q psy12303 475 RL 476 (480)
Q Consensus 475 ~~ 476 (480)
++
T Consensus 386 ~~ 387 (388)
T PRK07366 386 AF 387 (388)
T ss_pred Hh
Confidence 75
No 160
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.88 E-value=9.2e-20 Score=172.61 Aligned_cols=316 Identities=17% Similarity=0.124 Sum_probs=213.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+++|-++.+.+.++++.- ..+.|+++||||++.||+.||.. .|. +..|....+.|.+......-.|
T Consensus 91 Pte~Ei~~Aell~~~~p~~-e~vrfvnSGTEAtmsAiRlARa~-------TgR-----~kIikF~G~YHG~~D~~lv~ag 157 (432)
T COG0001 91 PTELEVELAELLIERVPSI-EKVRFVNSGTEATMSAIRLARAY-------TGR-----DKIIKFEGCYHGHSDSLLVKAG 157 (432)
T ss_pred CCHHHHHHHHHHHHhcCcc-cEEEEecchhHHHHHHHHHHHHh-------hCC-----CeEEEEcCCCCCCccHHHhhcC
Confidence 4688888999999998872 24999999999999999999975 332 4467777788888777766554
Q ss_pred CCC----------------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHH
Q psy12303 190 LGT----------------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADI 249 (480)
Q Consensus 190 ~~~----------------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i 249 (480)
-+. ..++.+|.| |++++++++++. |...++|++.....+.|.+.| ++++.++
T Consensus 158 sg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~l 229 (432)
T COG0001 158 SGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLREL 229 (432)
T ss_pred cCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHH
Confidence 221 245666766 999999999875 334999999999999999977 8999999
Q ss_pred HHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
|+++|+.||.|++..++.+..... . ...|+ .+|..+ +.|.++++.++|++-- .+++++...+..+.|..++
T Consensus 230 t~e~G~lLI~DEViTGFR~~~gGa-q-~~~gi-~PDltt--lGKiIGGGlP~ga~gG-r~eiM~~~~p~g~vyqaGT--- 300 (432)
T COG0001 230 TEEHGALLIFDEVITGFRVALGGA-Q-GYYGV-EPDLTT--LGKIIGGGLPIGAFGG-RAEIMEQLAPLGPVYQAGT--- 300 (432)
T ss_pred HHHcCcEEEEecchhhcccCCccc-c-cccCc-Ccchhh--hhhhhcCCcceeeecc-HHHHHhhhCCCCCccccCC---
Confidence 999999999999999987753322 2 34566 789999 6799999999999874 4566665443333333221
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcH-HH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecC
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD-EG-FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~ 407 (480)
. .+.+....+-.++++.+-. ++ |+.+.+.-.+|++-|.+.+.+ .++.+......+++++.|.+.
T Consensus 301 ---------~---sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~--~g~~~~v~~~gsm~~i~F~~~ 366 (432)
T COG0001 301 ---------L---SGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER--HGIPLTVNRVGSMFGIFFTEE 366 (432)
T ss_pred ---------C---CCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hCCCeEEeeecceEEEEecCC
Confidence 1 1111223333444444432 22 555555555555555555555 466665556677788877765
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+..+... .... .-.++...|.++| +++.+..+. ..|++..+|++||+++++++++..++
T Consensus 367 ~~~n~~da~~-sd~~-~~~~~~~~~l~~G-V~l~ps~~e-------a~flS~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 367 GVRNYADAKR-SDVE-RFAKFFHHLLNRG-VYLAPSQFE-------AGFLSTAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred CCCCHHHHHh-hchH-HHHHHHHHHHhCC-cccCCcccc-------ceeeecccCHHHHHHHHHHHHHHHHH
Confidence 4433222110 0011 1235556888898 455553322 23577888999999999999987654
No 161
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=3.2e-20 Score=182.16 Aligned_cols=286 Identities=14% Similarity=0.082 Sum_probs=185.1
Q ss_pred HHHHHHHHHHhCCCCCCeEE-CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSIL-APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~-t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++.+++++|++++++++ ++|+++++..++.+... ||+ .|+++.+.|+.+...++..|+
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~--------------~gd-~vlv~~p~y~~~~~~~~~~g~--- 133 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFID--------------PGD-EVIIPTPTFSYYEISAKAHGA--- 133 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCChHHHHHHHHHcCC---
Confidence 45677788889998888888 67777777777665532 445 788888888888888888887
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+++.+|.++++.+|++++++++++. +++|++++++||||.+.|++++.++|+++|+++++|++|+.+.- ...
T Consensus 134 ~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~--~~~ 205 (361)
T PRK00950 134 KPVYAKREEDFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE--YDY 205 (361)
T ss_pred EEEEeecCCCCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc--cch
Confidence 7888988777899999999988653 78889999999999999999999999999999999999976531 111
Q ss_pred cCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
.. ..... .--+++.|++|.++.| ..+|+++. ++............+. ...+..
T Consensus 206 ~~-~~~~~-~~vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~-----------------------~~~~~~ 259 (361)
T PRK00950 206 TP-LALEY-DNLIIGRTFSKVFGLAGLRIGYGFV-PEWLIDYYMRAKTPFS-----------------------LTRLSQ 259 (361)
T ss_pred HH-HHHhc-CCEEEEEeehHhhcCchhhcchhcC-CHHHHHHHHHhcCCCC-----------------------CCHHHH
Confidence 11 11111 1124556899999844 56888875 3444433322111110 112233
Q ss_pred HHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
..++..+. .+.+++..++..++++++.+.| ++.+. ++....+.+.. + .. + ..++.+.
T Consensus 260 ~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l-----~~~~~-~~~~~~i~~~~-~-~~---~-----------~~~~~~~ 317 (361)
T PRK00950 260 AAAIAALSDKEYIEKSIEHGIKSREYLYNEL-----PFKVY-PSEANFVLVDV-T-PM---T-----------AKEFCEE 317 (361)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHhhc-----CeeEC-CCcceEEEEEC-C-CC---C-----------HHHHHHH
Confidence 33333332 2334555555555555554443 24442 33333333322 1 11 0 2456777
Q ss_pred HHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 432 MMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
|.++|+.+.....+.+. .+++|+++. +.+++++++++|+++++
T Consensus 318 l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 318 LLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIVE 361 (361)
T ss_pred HHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHhC
Confidence 87888544332222221 469999943 77899999999998753
No 162
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=3.2e-20 Score=182.33 Aligned_cols=295 Identities=18% Similarity=0.205 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
..+..++++.+++++|.+. .+++++|++++..++.++.. ||+ +|+++..+|++...++...|.
T Consensus 60 ~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~~~--------------~gd-~v~~~~~~~~~~~~~~~~~g~ 122 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISALVG--------------KGD-LILSDALNHASLIDGCRLSGA 122 (360)
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHhCC--------------CCC-EEEEEccccHHHHHHHHhcCC
Confidence 3455567788888888643 45555667888777665532 445 788889999999999998887
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++. +|+++|++.+++.. +.++++|++.++++++|.+.|+++|.++|+++|+++++|++|+.+.+..
T Consensus 123 ---~~~~~~~-----~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~ 192 (360)
T TIGR00858 123 ---RVRRYRH-----NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGE 192 (360)
T ss_pred ---ceEEecC-----CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCC
Confidence 6666664 58999999987531 1237889999999999999999999999999999999999998664422
Q ss_pred ccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-C
Q psy12303 271 KKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-N 347 (480)
Q Consensus 271 ~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~ 347 (480)
.........++ .+.|+++.+++|+++. .| |+++. +++...........+... .+.. .
T Consensus 193 ~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~g-G~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 252 (360)
T TIGR00858 193 DGRGTLEHFGLKPEPVDIQVGTLSKALGS-YG-AYVAG-SQALIDYLINRARTLIFS-----------------TALPPA 252 (360)
T ss_pred CCCchHHhcCCCccCCcEEEEechhhhhc-cC-cEEEc-CHHHHHHHHHhCccceec-----------------CCCCHH
Confidence 11100011222 2568888999999985 33 66654 444444322111111110 0000 1
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
...++..+++.+ +..+++.++..++++++.+.|++ . ++++. ++....+.+.+ +.. .+ ..+
T Consensus 253 ~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~~~~~~~~~-~~~------------~~--~~~ 312 (360)
T TIGR00858 253 VAAAALAALELI--QEEPWRREKLLALIARLRAGLEA-L-GFTLM-PSCTPIVPVII-GDN------------AS--ALA 312 (360)
T ss_pred HHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHH-c-CCccC-CCCCCEEEEEe-CCH------------HH--HHH
Confidence 122333344332 22356778899999999999998 4 67764 44444444432 211 00 245
Q ss_pred HHHHHHhcccEEEeeeee---CCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 428 LKGRMMQAGTMMVGYQPL---NDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~---~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+.++|.++|+.+...... .+ .+++|++ ++..++++|+++++++|+
T Consensus 313 ~~~~l~~~gI~v~~~~~~~~~~~-~~~iRis-~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 313 LAEELQQQGIFVGAIRPPTVPAG-TSRLRLT-LSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHCCeeEeeeCCCCCCCC-CceEEEE-EcCCCCHHHHHHHHHhhC
Confidence 778888888554332111 12 4689999 888899999999999874
No 163
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.88 E-value=8.7e-20 Score=180.77 Aligned_cols=325 Identities=13% Similarity=0.105 Sum_probs=206.1
Q ss_pred HHHHHHHHcCc---CCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCC
Q psy12303 89 AGEWLIATANT---NMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLS 163 (480)
Q Consensus 89 ~~~~l~~~~~~---~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~ 163 (480)
+.+.+....+. +...|....+...+.+.+.+++....+ +++.++++|+|+++++..++.....
T Consensus 51 v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~------------ 118 (394)
T PRK06836 51 VKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILN------------ 118 (394)
T ss_pred HHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcC------------
Confidence 33555444332 133454445566677777777766554 4677899999999999888877643
Q ss_pred ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 164 AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 164 ~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|+++.++|..+...++..|+ +++.+|.+++ +.+|+++|+++++++ +++|++++++||||.+.|
T Consensus 119 --~gd-~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~ 186 (394)
T PRK06836 119 --PGD-EVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTDTFQPDLDALEAAITPK------TKAVIINSPNNPTGVVYS 186 (394)
T ss_pred --CCC-EEEEcCCCCccHHHHHHHcCC---EEEEEecCCccCcCCHHHHHhhcCcC------ceEEEEeCCCCCCCcCCC
Confidence 445 788888999999888888888 8899998776 789999999999764 889999999999999977
Q ss_pred ---hHHHHHHHHH------cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhh
Q psy12303 243 ---IEEIADICQK------YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLL 312 (480)
Q Consensus 243 ---l~~I~~i~~~------~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~ 312 (480)
+++|+++|++ ||+++++|++|............ ..... .-.+++.|++|.++. +.++|+++..+. ..
T Consensus 187 ~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~~-~~ 263 (394)
T PRK06836 187 EETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPY-IFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNPE-ME 263 (394)
T ss_pred HHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCC-hHHcc-CcEEEEecchhhccCcceeeEEEecCHH-Hh
Confidence 6777777888 89999999999876432111111 12222 235777899999984 468899887543 21
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
+... ........... .+ ......+...+....+.. . ...++..+..+.+.+.|++ . |+++.
T Consensus 264 ~~~~-~~~~~~~~~~~-------~~------~~~~~~~~q~~~~~~l~~-~--~~~~~~~~~r~~l~~~L~~-~-g~~~~ 324 (394)
T PRK06836 264 DADD-LVAALVFANRI-------LG------FVNAPALMQRVVAKCLDA-T--VDVSIYKRNRDLLYDGLTE-L-GFECV 324 (394)
T ss_pred hhHH-HHHHHHHHhhc-------cc------cccCCHHHHHHHHHHhCC-h--HHHHHHHHHHHHHHHHHHh-C-CCEee
Confidence 1000 00000000000 00 000111222222222211 1 1234556677888888888 4 77764
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHH
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
+|..+.+.|.-.|. .. ..++.+.|.+.|+.+.....+.. .+++|+++. .++++++..++.
T Consensus 325 -~~~gg~~~~~~~~~-~~--------------~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~---~~~~~~~~~i~~ 384 (394)
T PRK06836 325 -KPQGAFYLFPKSPE-ED--------------DVAFCEKAKKHNLLLVPGSGFGC-PGYFRLSYC---VDTETIERSLPA 384 (394)
T ss_pred -cCCceEEEEEeCCC-CC--------------HHHHHHHHHhCCEEEECchhcCC-CCeEEEEec---CCHHHHHHHHHH
Confidence 56666665543322 11 13456777777765544333322 579999953 479999999999
Q ss_pred HHHhhcc
Q psy12303 473 MDRLGHD 479 (480)
Q Consensus 473 l~~~~~~ 479 (480)
|++++++
T Consensus 385 l~~~l~~ 391 (394)
T PRK06836 385 FEKLAKE 391 (394)
T ss_pred HHHHHHH
Confidence 9988754
No 164
>PRK09265 aminotransferase AlaT; Validated
Probab=99.88 E-value=6.8e-20 Score=182.27 Aligned_cols=319 Identities=13% Similarity=0.077 Sum_probs=199.1
Q ss_pred cchhcChhhHHHHHHHHHHHHHHh--CCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQII--GWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~--g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
..|....+..++.+.+.+++.... ++++.++++|+|+++++..++.+..+ ||+ .|+++.++|+
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~--------------~gd-~Vlv~~p~y~ 130 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLN--------------NGD-EVLVPAPDYP 130 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCC--------------CCC-EEEEeCCCCc
Confidence 345444444556555555553321 56778899999999999888876643 556 7888999999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcC
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYN 254 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~ 254 (480)
.+..++...|. +++.++.+. ++.+|++++++++++. +++|++++|+||||.+.+ +++|.++|+++|
T Consensus 131 ~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~ 201 (404)
T PRK09265 131 LWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIARQHN 201 (404)
T ss_pred ChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence 99999988887 677777653 4679999999988654 889999999999999988 889999999999
Q ss_pred cEEEeeccccccccccccccCcccCCC-CCCcc-ceeCccccCCC-cccceEEEEe-CchhhHhhhcCCccccccccccc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRHPRLTGI-ERADS-VTWNPHKLMGT-LLQCSTIHFK-QDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~D~-~~~s~hK~~~~-p~~~g~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
+++++|++|+.......... .+... +.... +..|+.|.++. +..+|+++.. +........... ..+....
T Consensus 202 ~~ii~De~y~~~~~~~~~~~--~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~-~~~~~~~--- 275 (404)
T PRK09265 202 LIIFADEIYDKILYDGAVHI--SIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGL-DMLASMR--- 275 (404)
T ss_pred CEEEEehhhhhccCCCCCcC--CHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHH-HHHhccc---
Confidence 99999999987643211110 11111 12223 34678999954 4678999864 332111110000 0000000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHH---HHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQ---IDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~---~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
+ + .+.+...+....++ .+.+.+. .++..+.++.+.+.|++ .+++++ .+|..+.++|...+
T Consensus 276 --------~---~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~~~~~-~~p~~g~~l~~~~~ 339 (404)
T PRK09265 276 --------L---C---ANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA-IPGVSC-VKPKGALYAFPKLD 339 (404)
T ss_pred --------c---C---CCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcc-cCCCcceEEEEEec
Confidence 0 0 11222333333332 1222222 24566678888899988 788876 46777777765443
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
....+.... ...+...+.+.|+.+.....+. ...+++|+++ . .++++++..+++|+++++
T Consensus 340 ~~~~~~~~~---------~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~-~--~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 340 PKVYPIHDD---------EQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT-L--PRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred ccccCCCCH---------HHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe-C--CCHHHHHHHHHHHHHHHH
Confidence 321100000 1234566677775544433322 1257999995 2 579999999999998765
No 165
>KOG0257|consensus
Probab=99.88 E-value=1.3e-20 Score=175.00 Aligned_cols=350 Identities=13% Similarity=0.102 Sum_probs=231.9
Q ss_pred cccccCCCChHHhHHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC---CCCCeEECCChhHHHHHHHHHHHH
Q psy12303 76 MNQLSCGLDVVSMAGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW---QGGDSILAPGGSISNLYAFLAARH 151 (480)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~---~~~~~~~t~ggt~a~~~al~~~~~ 151 (480)
++.......+|.++.+.+...... ....|....+..++.+.+++.+++++|. +.+++.+|.|+.+|+..++++..+
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 555545555566666666655443 4566777778889999999999998885 557899999999999999999987
Q ss_pred hcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--------CCCCCCHHHHHHHHHHHHHCCC
Q psy12303 152 KMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--------KRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 152 ~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--------~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+|| .|++-++.+.++.-...+.|. ..++||.. +++.+|.+.|+.++.+.
T Consensus 116 --------------~GD-eVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~k----- 172 (420)
T KOG0257|consen 116 --------------PGD-EVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSSSDWTLDPEELESKITEK----- 172 (420)
T ss_pred --------------CCC-EEEEecCcchhhhhHHhhcCC---cceeeccccccccccCccccCChHHHHhhccCC-----
Confidence 556 788889999999999999987 55666655 46899999999999987
Q ss_pred ccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccccc-ccCcccCCCCCCccceeCccccCCCc-
Q psy12303 224 IPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKK-YRHPRLTGIERADSVTWNPHKLMGTL- 298 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~D~~~~s~hK~~~~p- 298 (480)
|++|++++|+||+|.+.+ |++|+++|++||++++.|++|......... .+.-.++|+...-+-+.|+.|.++..
T Consensus 173 -Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG 251 (420)
T KOG0257|consen 173 -TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG 251 (420)
T ss_pred -ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeee
Confidence 999999999999999965 899999999999999999999887663321 11112366655667788999999854
Q ss_pred ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchH--HHHHHH--Hhc-HHHHHHHHHHHH
Q psy12303 299 LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFK--LWLQWR--AKG-DEGFEKQIDRLM 372 (480)
Q Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~--~~~~l~--~~g-~~~~~~~~~~~~ 372 (480)
...|+++. ++.+............ +.|...+ .+.+ ....+. .-+ .....++.+..+
T Consensus 252 WrlGW~ig-p~~L~~~~~~vh~~~~-----------------~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~ 313 (420)
T KOG0257|consen 252 WRLGWAIG-PKHLYSALFPVHQNFV-----------------FTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYK 313 (420)
T ss_pred eeeeeeec-hHHhhhhHHHHhhccc-----------------cccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHH
Confidence 56899886 6555544332211111 1122222 1111 111111 111 234455889999
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccE-EEeeeeeCCc---
Q psy12303 373 ELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTM-MVGYQPLNDL--- 448 (480)
Q Consensus 373 ~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~-~~~~~~~~~~--- 448 (480)
+.++.|.+.|.+ + |+++. .|+.+.+.+...+..-......+..+.=+ .-.+...+..++.+ ++.++.+...
T Consensus 314 ~krdil~k~L~~-l-g~~v~-~p~gayyl~adfs~~~~~~~~~~~~~~~~--d~~~~~wl~~~~Gv~~IP~saF~s~~~~ 388 (420)
T KOG0257|consen 314 EKRDILAKALEE-L-GLKVT-GPEGAYYLWADFSLAKSWPFFEEILEKPD--DFKFVRWLIKEGGVVVIPPSAFGSREHI 388 (420)
T ss_pred HHHHHHHHHHHh-c-CCccc-cCCCceEEEEeccccccCCcchhhccCCC--ceeeehhhhccCcEEEeCchhcCCchhh
Confidence 999999999999 5 99985 56666666544331100000000000000 01234555555443 4444333211
Q ss_pred ---ccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 449 ---PNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 449 ---~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.+.+|+++ .-+++.++..++.+++
T Consensus 389 ~~~~~~~r~~~---~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 389 KVAERLVRFCF---CKADETLRKAIERLKK 415 (420)
T ss_pred HHHHHHHHHHH---HhhHHHHHHHHHHHhh
Confidence 34677773 3467778887777763
No 166
>PRK06855 aminotransferase; Validated
Probab=99.88 E-value=1e-19 Score=181.92 Aligned_cols=342 Identities=13% Similarity=0.043 Sum_probs=212.3
Q ss_pred hHHHHHHHHc-CcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 88 MAGEWLIATA-NTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 88 ~~~~~l~~~~-~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
.+.+.+...+ +.....|....+..++.+.+.+|+.+..|. +++++++|+|+++|+..++. +.+
T Consensus 52 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~------------- 117 (433)
T PRK06855 52 WMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLR------------- 117 (433)
T ss_pred HHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcC-------------
Confidence 3444444433 233345666667788888889999887664 56789999999999888764 332
Q ss_pred cCCceEEEecCCCchhHHHHH-HHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCA-AVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~-~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
||+ .|++..++|+.+..+. ...|. +++.+|+++ ++.+|+++|+++++.. .+++++++++|+||||.+.
T Consensus 118 -~Gd-~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~----~~~~~i~l~~P~NPTG~~~ 188 (433)
T PRK06855 118 -REA-RVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYN----PSIAGILLINPDNPTGAVY 188 (433)
T ss_pred -CCC-eEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcC----CCceEEEEECCCCCCCcCC
Confidence 556 7888888988765432 23355 677888764 4679999999998632 1268888899999999997
Q ss_pred C---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCC-CccceeCccccCC-CcccceEEEEeC----c---
Q psy12303 242 P---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER-ADSVTWNPHKLMG-TLLQCSTIHFKQ----D--- 309 (480)
Q Consensus 242 ~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~-~D~~~~s~hK~~~-~p~~~g~~~~~~----~--- 309 (480)
+ +++|.++|++||+|+++|++|+...+....... ...-..+ ..+++.|++|.++ .+..+|++++.+ .
T Consensus 189 s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~s-l~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~ 267 (433)
T PRK06855 189 PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVP-LSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK 267 (433)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCC-HHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence 7 677888899999999999999876542211110 1110111 2366789999996 557899998732 1
Q ss_pred hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12303 310 GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G--DEGFEKQIDRLMELAEYMVKKIKSM 385 (480)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g--~~~~~~~~~~~~~l~~~l~~~l~~~ 385 (480)
..+........... + ...+...+....+ + .+.+++..+...+..+.+.+.|++
T Consensus 268 ~~~~~~~~~~~~~~-------------------~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~- 324 (433)
T PRK06855 268 KYINSILNAKMIEV-------------------C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD- 324 (433)
T ss_pred HHHHHHHHhhcccc-------------------C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 11111110000000 0 1122333333333 2 345677777888889999999988
Q ss_pred CCCeEEecCCceeEEEEEeecCccC------CCchhhHHHHhhh-------hhHHHHH-HHHhcccEEEeeeeeCCcccE
Q psy12303 386 PDKFYLILEPEMVNVSFWYLPTRVR------NMPHEKRLNILGE-------ITPILKG-RMMQAGTMMVGYQPLNDLPNF 451 (480)
Q Consensus 386 ~~g~~~~~~~~~~~v~f~~~~~~~~------~~~~~~~~~~l~~-------~~~~i~~-~l~~~g~~~~~~~~~~~~~~~ 451 (480)
.+++.+ .+|+.+.++|.-.|.... ..+..+..+.+.. ...++.. .+.+.|+.+++...+......
T Consensus 325 ~~~~~~-~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~ 403 (433)
T PRK06855 325 VPGLKV-NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNG 403 (433)
T ss_pred CCCeec-cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCc
Confidence 778775 578888887765554320 0000000000000 0223443 345667555444333222356
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 452 FRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 452 ~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+|+++.+ .++++|++.+++|.+++++
T Consensus 404 ~Rls~~~--~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 404 FRVTLLE--RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred eEEEECC--CcHHHHHHHHHHHHHHHHH
Confidence 9999654 4699999999999987753
No 167
>PRK09148 aminotransferase; Validated
Probab=99.88 E-value=1e-19 Score=180.76 Aligned_cols=316 Identities=10% Similarity=0.048 Sum_probs=205.1
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+..++.+.+++++.+.+|. ++. ++++|+|+++++..++.+... ||+ .|+++.++|
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~--------------~gd-~Vl~~~P~y 126 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITA--------------PGD-VILCPNPSY 126 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcC--------------CCC-EEEEcCCCC
Confidence 45555556678888888888887775 455 799999999999988887754 556 788889999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh---HHHHHHHHHcCc
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI---EEIADICQKYNM 255 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l---~~I~~i~~~~~~ 255 (480)
+.+...+...|. +++.+|.+.++. ++++++++++... .++++|++++|+||||.+.+. ++|.++|++||+
T Consensus 127 ~~~~~~~~~~g~---~v~~v~~~~~~~-~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~ 199 (405)
T PRK09148 127 PIHAFGFIMAGG---VIRSVPAEPDEE-FFPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDI 199 (405)
T ss_pred cccHHHHHhcCC---EEEEEeCCCCCC-CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCe
Confidence 999888888887 888999875432 3455666554321 238899999999999999875 678889999999
Q ss_pred EEEeeccccccccccccccC-cccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR 333 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 333 (480)
++++|++|+........... ..+.+..+..+++.|++|.++. +..+|+++. ++..+...... ..+....
T Consensus 200 ~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l~~~-~~~~~~~------- 270 (405)
T PRK09148 200 IILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAALTRV-KSYLDYG------- 270 (405)
T ss_pred EEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHHHHHHH-HHHhccC-------
Confidence 99999999876542111110 0111111233457899999984 467899885 55554433211 1111000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 334 YDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 334 ~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
...+...++...+ +.+.+++..+...+..+++.+.|++ . ++.+ ..|..++++|.-.|.....
T Consensus 271 -------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~-~~p~~g~f~~~~l~~~~~~ 334 (405)
T PRK09148 271 -------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR-A-GWDI-PPPAASMFAWAPIPEAFRH 334 (405)
T ss_pred -------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcc-CCCCeeEEEEEECCCccCC
Confidence 1112222222323 3455677777888889999999998 4 7764 3577777666544432211
Q ss_pred CchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 412 MPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+ ..++...+. +.|+.+.....+.. ..+++|+++. .+.+++++.++.|.++++
T Consensus 335 ~~-----------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 335 LG-----------SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRFLS 389 (405)
T ss_pred CC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 10 124556555 56754444322221 1479999943 468998888888887664
No 168
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.88 E-value=1.2e-20 Score=185.36 Aligned_cols=312 Identities=16% Similarity=0.184 Sum_probs=207.5
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
...|....+...+++.+.+++.+--|. ++. ++++++|+.+++..++.+.+.. +|+ .|+++.+.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~-------------~~~-~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKIN-------------PGD-TVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSS-------------TTS-EEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccccc-------------ccc-cceecCCc
Confidence 345666666777777777776654444 445 5666666555555555444221 335 78999999
Q ss_pred chhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH---HHHHH
Q psy12303 178 HYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA---DICQK 252 (480)
Q Consensus 178 h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~---~i~~~ 252 (480)
|+.+...++..|+ +++.+|.+ .++.+|+++|++.+++...++.++.+|++++++||||...+.+++. ++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999998 78888864 5789999999999998655544478999999999999997755554 55999
Q ss_pred cCcEEEeeccccccccccccc-c-CcccCCCCCC-ccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKY-R-HPRLTGIERA-DSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~-~-~~~~~~~~~~-D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
||+++++|++|+.+....... . ...... .. .+++.|++|.++.| ...|++++ ++............+....
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~~-- 254 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDE--DDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLSSS-- 254 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTT--TSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTSSH--
T ss_pred cccceeeeeceeccccCCCccCcccccccc--cccceeeeeccccccccccccccccc-hhhhhhhhhhccccccccc--
Confidence 999999999999987653211 0 101221 22 47788999998765 57899998 5554443322111111100
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
.....+...+...+ .+.+++..++..++++++.+.|++ . ++.+..++ .+.++|...+
T Consensus 255 ------------------~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-~~~~~~~~-~~~~~~~~~~ 313 (363)
T PF00155_consen 255 ------------------PMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE-I-GITVLPPE-AGFFLWVRLD 313 (363)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TSEEEHHS-BSSEEEEEES
T ss_pred ------------------hhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH-h-hhheeecc-CccEEEEEcc
Confidence 01111222222222 226788889999999999999999 5 99987544 6666664322
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
.. ...++.+.|.++ |+.+. ++...+.++++|++ . ...+++++++++++|
T Consensus 314 ~~---------------~~~~l~~~L~~~~gi~v~-pg~~~~~~~~iRi~-~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 314 PN---------------DAEELAQELLEEYGILVR-PGSYFGVPGYIRIS-L-ASHSEEDLEEALERL 363 (363)
T ss_dssp HH---------------HHHHHHHHHHHHHTEEEE-EGGGGTSTTEEEEE-G-GCSCHHHHHHHHHHH
T ss_pred cc---------------hHHHHHHHHHHhCCEEEE-ecCCCCCCCEEEEE-e-ccCCHHHHHHHHhhC
Confidence 11 134677888888 75544 43444437899999 4 567999999999876
No 169
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1e-19 Score=179.01 Aligned_cols=299 Identities=11% Similarity=0.031 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 108 PVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
++..++.+.+++++.+..| ++++++++|+|+++++..++.+... +|+..|++..++|+.+..
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~--------------~g~~~Vlv~~P~y~~~~~ 131 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCL--------------GGEGSILVAEPTFSMYGI 131 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcC--------------CCCCeEEEcCCChHHHHH
Confidence 4556666666666665532 5677899999999998877765543 333368899999999999
Q ss_pred HHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHH-HcCcEEEeec
Q psy12303 184 CAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQ-KYNMWLHVDA 261 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~-~~~~~l~vD~ 261 (480)
+++..|+ +++.++.++ ++.+|+++|++++++.. ..++++|++++++||||.+.+.+++.++++ .+++++++|+
T Consensus 132 ~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De 206 (374)
T PRK02610 132 LAQTLGI---PVVRVGRDPETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDE 206 (374)
T ss_pred HHHHcCC---EEEEecCCcccCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEec
Confidence 9999998 888888875 47899999999986521 123889999999999999988777666653 2489999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
+|..+..... .+.+... .--+++.|++|.++ .+..+|+++. ++.+.+........|.
T Consensus 207 ~Y~~~~~~~~---~~~~~~~-~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l~~~~~~~~----------------- 264 (374)
T PRK02610 207 AYFEFSQTTL---VGELAQH-PNWVILRTFSKAFRLAAHRVGYAIG-HPELIAVLEKVRLPYN----------------- 264 (374)
T ss_pred cccccCccch---HHHHhcC-CCEEEEEecchhccCcccceeeeec-CHHHHHHHHHhcCCCC-----------------
Confidence 9986532110 0011111 11255779999995 4478999885 5555544332211111
Q ss_pred ccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 341 IQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
...+...++...++ .+.+.+.+++..+.++.+.+.|++ ++++.+. |..+.++|...+....
T Consensus 265 ------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~--p~~g~f~~~~l~~~~~--------- 326 (374)
T PRK02610 265 ------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQE-LPQLRVW--PSAANFLYLRLSQDAA--------- 326 (374)
T ss_pred ------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEeC--CCcceEEEEeCCCCCC---------
Confidence 11222222222222 233444445555567778888888 7788753 5556655543332211
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.+.|+.+.. . .+++|+++. +.+++++++++|++++++|
T Consensus 327 -----~~~~~~~l~~~gi~v~~-----~-~~~lRls~~----~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 327 -----LAALHQALKAQGTLVRH-----T-GGGLRITIG----TPEENQRTLERLQAALTQL 372 (374)
T ss_pred -----HHHHHHHHHHCCEEEEe-----C-CCeEEEeCC----CHHHHHHHHHHHHHHHhhc
Confidence 23566777788854432 2 468999954 3578899999999887654
No 170
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=3.8e-20 Score=173.39 Aligned_cols=298 Identities=15% Similarity=0.145 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.+++..+ ..+.++|++||||||..|++.||.+.. .|++..|+. ....|.-...+...-|-
T Consensus 84 ~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~----------~~~k~~Iia~~nsFHGRT~galS~t~~ 152 (404)
T COG4992 84 EPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTG----------DPEKSKIIAFENSFHGRTLGALSATGQ 152 (404)
T ss_pred hHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcC----------CCCCcEEEEEcCCcCCccceeeeccCC
Confidence 445567788888887 345699999999999999999998632 122224444 44445543333333221
Q ss_pred -------C--CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 -------G--TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 -------~--~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
+ ...+..+|.+ |+++++++|+++ |.+|++...+-..|.+.+ ++++.++|++||+++
T Consensus 153 ~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~------taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LL 221 (404)
T COG4992 153 PKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDED------TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALL 221 (404)
T ss_pred hhhccCCCCCCCCceecCCC-----CHHHHHHHhccC------eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEE
Confidence 1 1245667776 999999999996 999999999999998865 899999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
|.|++|.|.......+.+ ...++ ..|+++ .-|.++++++.|.++++ +....... +|
T Consensus 222 I~DEVQtG~GRTGk~fA~-e~~gV-~PDI~t--laK~LgGG~PigA~la~-~~~~~~~~-------------------~G 277 (404)
T COG4992 222 ILDEVQTGLGRTGKLFAY-EHYGV-EPDILT--LAKALGGGFPIGAMLAT-EEIASAFT-------------------PG 277 (404)
T ss_pred EEeccccCCCccchHHHH-HHhCC-CCCEEE--eeccccCCccceeeEEc-hhhhhcCC-------------------CC
Confidence 999999999887777666 66677 799999 66999999999999987 33222110 11
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecCCc--eeEEEEEeecCccCCCch
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILEPE--MVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~~~--~~~v~f~~~~~~~~~~~~ 414 (480)
.++ .+-..+.+++..+...+..-.-++..++..++.++|.+.|++ + ..+.++.+.. +-++-+.+.+..
T Consensus 278 ~Hg--STfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~-l~~~~~~v~~vRG~GLmiGiel~~~~------ 348 (404)
T COG4992 278 DHG--STFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRE-LKRRYPLVKEVRGRGLMIGIELKEPY------ 348 (404)
T ss_pred ccc--CCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHH-HhhcCCceeeeecceeEEEEEecCcc------
Confidence 111 011123444444443332222244567777788888888877 3 2233332222 222223222211
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...++.+.+.++|.++... + .+++|+. +....+++||+..++++++.++.
T Consensus 349 ---------~a~~~~~~~~~~gvL~~~a----~-~~ViR~~-PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 349 ---------RARDIVRALREEGVLVLPA----G-PNVIRFL-PPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred ---------cHHHHHHHHHHCCeEEecC----C-CCeEEec-CCccCCHHHHHHHHHHHHHHHHH
Confidence 0356788899999655443 2 5799999 99999999999999999988753
No 171
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=8.6e-20 Score=178.60 Aligned_cols=311 Identities=13% Similarity=0.059 Sum_probs=199.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.+++.+.+++++|.+. .+++++|..||+.++.++..... -....+.+....+..|+.....|.|+..++++.+
T Consensus 145 ~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~~i~aL~~~~~-~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~ 221 (476)
T PLN02955 145 YTTYHRLLESSLADLKKKED--CLVCPTGFAANMAAMVAIGSVAS-LLAASGKPLKNEKVAIFSDALNHASIIDGVRLAE 221 (476)
T ss_pred ChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHHHHHHHhhccc-cccccccccCCCCcEEEEeccchHHHHHHHHhcc
Confidence 34555667777999999976 89999999999999987632100 0000000000013378999999999999999884
Q ss_pred CC-CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 190 LG-TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 190 ~~-~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
.. ..++..++.+ |+++|+++++.... ..++|++....++.|.+.|+++|.++|++||+++++|+||+.+.+
T Consensus 222 ~~~~a~~~~f~HN-----D~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~ 293 (476)
T PLN02955 222 RQGNVEVFVYRHC-----DMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC 293 (476)
T ss_pred ccCCceEEEeCCC-----CHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee
Confidence 31 2267777776 99999999976422 257888999999999999999999999999999999999998776
Q ss_pred ccccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 269 LSKKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 269 ~~~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
--.........++ ...|+++.++.|.++.. .|+ ++.++...+........|++..... ..
T Consensus 294 G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGf-i~gs~~~~~~l~~~~~~~ifStalp----------------p~ 354 (476)
T PLN02955 294 GENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGF-IACSKKWKQLIQSRGRSFIFSTAIP----------------VP 354 (476)
T ss_pred cCCCCcHHHHhCCCCCCcEEEEeCccchhcc--Cce-eecHHHHHHHHHHhCCCCeeccccc----------------HH
Confidence 2211000011122 36789999999998852 244 4455555555544455555443110 01
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+.++.+++..+-. -..+.++.+++.++|.+. .|+.+ ...++.+.. +.. .....
T Consensus 355 ~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~-----~G~~~----~sPI~pI~i-g~~--------------~~a~~ 408 (476)
T PLN02955 355 MAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL-----SGVDI----SSPIISLVV-GNQ--------------EKALK 408 (476)
T ss_pred HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh-----cCCCC----CCCEEEEEe-CCH--------------HHHHH
Confidence 12223333333211 134567778888888873 24432 133333322 111 01245
Q ss_pred HHHHHHhcccEEEe---eeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 428 LKGRMMQAGTMMVG---YQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 428 i~~~l~~~g~~~~~---~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.++|.++|..+.. |++..+ ...+|++ .+..+|++||++++++|.++..
T Consensus 409 ~~~~L~~~Gi~v~~i~yPtVP~g-~~rLRi~-lsA~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 409 ASRYLLKSGFHVMAIRPPTVPPN-SCRLRVT-LSAAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred HHHHHHHCCCEEEEECCCCCCCC-CceEEEe-eCCCCCHHHHHHHHHHHHHHHh
Confidence 78899999955332 222233 4679999 8899999999999999988654
No 172
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=7.1e-20 Score=179.88 Aligned_cols=317 Identities=15% Similarity=0.092 Sum_probs=199.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
+|...++|+ .+++++|.+. +++++|||+|+..++.++.-. ||+ +|+++..+|.+...++.
T Consensus 32 g~~~~~le~----~la~~~g~~~--~v~~~sgt~al~lal~al~~~-------------~Gd-~Viv~~~~~~~~~~~~~ 91 (379)
T PRK11658 32 GPKNQALEQ----AFCQLTGNQH--AIAVSSATAGMHITLMALGIG-------------PGD-EVITPSLTWVSTLNMIV 91 (379)
T ss_pred CHhHHHHHH----HHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC-------------CCC-EEEECCCcHHHHHHHHH
Confidence 454455554 4888888864 889999999999988776211 556 88899999999999998
Q ss_pred HcCCCCCCeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 187 VCGLGTDNCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
..|+ +++.++++.+ +.+|+++++++++++ +++|+.+ +++|...|+++|.++|+++|+++++|+||+.
T Consensus 92 ~~G~---~~v~vd~~~~~~~~d~~~l~~~i~~~------tkav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~ 159 (379)
T PRK11658 92 LLGA---TPVMVDVDRDTLMVTPEAIEAAITPR------TKAIIPV---HYAGAPADLDAIRAIGERYGIPVIEDAAHAV 159 (379)
T ss_pred HcCC---EEEEEecCCCcCCcCHHHHHHhcccC------CeEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECCCcc
Confidence 8888 8899998764 579999999999765 7888744 4589999999999999999999999999997
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCC-cccccc-ccc-ccCcccCCCCcccc
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMS-AEYLFM-QDK-LYDVRYDTGDKVIQ 342 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~-~~~l~~-~~~-~~~~~~~~~~~~~~ 342 (480)
+....... . +..+.++++++.+|.+.++ ..|+++.++++....+.... .++... ... .....+.+... .
T Consensus 160 g~~~~~~~----~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~ 231 (379)
T PRK11658 160 GTYYKGRH----I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVL--T 231 (379)
T ss_pred CCeECCee----c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceee--c
Confidence 65533211 1 1125578888899988763 34556656666554332111 011000 000 00000011100 1
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-----eeEEEEEeecCccCCCchhhH
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-----MVNVSFWYLPTRVRNMPHEKR 417 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-----~~~v~f~~~~~~~~~~~~~~~ 417 (480)
.|..+....+-+++.....+++++..++.+++++++.+.|++ ++...+..+.. ...++++..+.. .+.+
T Consensus 232 ~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 305 (379)
T PRK11658 232 PGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALAD-LPFQPLSLPAWPHQHAWHLFIIRVDEER-CGIS---- 305 (379)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCcCCCCCCceeEEEEEEEECCcc-ccCC----
Confidence 122222333444444444678999999999999999999998 66433322211 123333332111 0111
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEe-eee---------------eCC----cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVG-YQP---------------LND----LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~-~~~---------------~~~----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.+.|.+.|+-... +.+ ... ....+.+. +++..|++|++++++.|+++.
T Consensus 306 -------r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 306 -------RDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred -------HHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHHHHHHH
Confidence 23556666666642110 000 000 02445666 688899999999999999864
No 173
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=2.7e-20 Score=180.58 Aligned_cols=299 Identities=14% Similarity=0.137 Sum_probs=182.5
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.|...+...++++. +++++|.++ .++++||++++..++.+... ||+ .|+++...|.+..
T Consensus 29 ~Y~~~~~~~~L~~~----la~~~g~~~--~~v~~~g~~a~~~~l~~~~~--------------~gd-~vi~~~~~~~~~~ 87 (333)
T PRK10534 29 VYGDDPTVNALQDY----AAELSGKEA--ALFLPTGTQANLVALLSHCE--------------RGE-EYIVGQAAHNYLY 87 (333)
T ss_pred ccCCCHHHHHHHHH----HHHHhCCCe--EEEeCchHHHHHHHHHHhcC--------------CCC-eeEEechhhhhHh
Confidence 34445555565555 788889876 57999999999988876643 556 6677777775433
Q ss_pred HH--HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHH---HHHHHHHcCcEE
Q psy12303 183 SC--AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEE---IADICQKYNMWL 257 (480)
Q Consensus 183 ~~--~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~---I~~i~~~~~~~l 257 (480)
.+ +...+ ...++.++.++++.+|+++|+++++++..++.++++|++++++ +|.+.|.++ |.++|++|++++
T Consensus 88 ~~~~~~~~~--~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~l 163 (333)
T PRK10534 88 EAGGAAVLG--SIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLAL 163 (333)
T ss_pred cCCchHHhc--CceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeE
Confidence 32 23443 1266677777789999999999986532122237888888654 599977654 567889999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|+||..+.........+.+. ...|.++.+++|.++.+ .|+.++.+++.+.........+.
T Consensus 164 vvDEA~~~~~~~~~~~~~~~~~--~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~~-------------- 225 (333)
T PRK10534 164 HVDGARIFNAVVAYGCELKEIT--QYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMTG-------------- 225 (333)
T ss_pred EeeHHHHHHHHHHcCCCHHHHH--hcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHhC--------------
Confidence 9999987432110000000111 13466667899988865 57544567766554432111110
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhH
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKR 417 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 417 (480)
++-...++.+.+++..+ +...+.+++..+.++++.+.|++ . |+++. +|..+ +++...+.. .
T Consensus 226 -----~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~-~~~~n-fv~~~~~~~-~------- 286 (333)
T PRK10534 226 -----GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLRE-A-GADVM-RQDTN-MLFVRVGEE-Q------- 286 (333)
T ss_pred -----CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHh-C-CCccC-CCCce-EEEEECCch-h-------
Confidence 00001122233333332 22234455566678899999999 4 88874 55544 444322210 0
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.++|+++ .+ ...+|++ .+..+|++++++++++|++++.
T Consensus 287 -------~~~~~~~l~~~gi~v-~~------~~~~rl~-~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 287 -------AAALGEYMRERNVLI-NA------SPIVRLV-THLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred -------HHHHHHHHHHcCeee-cC------CceEEEE-EEeCCCHHHHHHHHHHHHHHhc
Confidence 235667788888544 33 1358998 5667899999999999998764
No 174
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.87 E-value=6.8e-20 Score=178.76 Aligned_cols=287 Identities=13% Similarity=0.104 Sum_probs=196.5
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.++++++.+++++++|+|+++++..++.+. . + + .|++..+.++.+...++..|. +
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~--------------~-~-~v~i~~P~y~~~~~~~~~~g~---~ 116 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATELIFNIVKVT-K--------------P-K-KVLILAPTFAEYERALKAFDA---E 116 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-C--------------C-C-cEEEecCChHHHHHHHHHcCC---e
Confidence 35677788888998889999999999998887654 2 2 3 577888899999999998888 7
Q ss_pred eEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 195 CVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 195 v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
++.+|.+. ++.+| +++.+.+.+. +++|++++|+||||.+.+ +++|.++|++|++++++|++|..+...
T Consensus 117 ~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~ 189 (354)
T PRK06358 117 IEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE 189 (354)
T ss_pred eEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC
Confidence 88898864 35788 5665555432 788889999999999976 788888899999999999999866542
Q ss_pred cccccCcccCCCCC--CccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 270 SKKYRHPRLTGIER--ADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 270 ~~~~~~~~~~~~~~--~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
... .+.+..++. --+++.|++|.++ .+..+|++++.++............+-
T Consensus 190 ~~~--~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~~----------------------- 244 (354)
T PRK06358 190 NET--ISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWS----------------------- 244 (354)
T ss_pred ccc--hhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCc-----------------------
Confidence 211 111111111 1256679999998 558899998765554443322211110
Q ss_pred CCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 347 NDIFKLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
...+..+++...+.. +.+.+..+...+.++.+.+.|++ .+++.+. +|..+ ++|.-.+. .
T Consensus 245 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~-~~~g~-f~~~~~~~-----------------~ 304 (354)
T PRK06358 245 INTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE-FKGIKVY-KPSVN-FIFFKLEK-----------------P 304 (354)
T ss_pred chHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEc-CCcce-EEEEEcCc-----------------h
Confidence 123334444444432 34577778888889999999998 7887764 56555 33322211 1
Q ss_pred HHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 426 PILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.++.+.|.+.|+.+.....+.+ ..+++|+++. ++++.++++++|+++.
T Consensus 305 ~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 IDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 3566778888855554433322 1479999943 6899999999998764
No 175
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.87 E-value=1.6e-19 Score=188.67 Aligned_cols=370 Identities=13% Similarity=0.037 Sum_probs=242.3
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHH-HHHHH--H-cCcCCcchhcChh
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAG-EWLIA--T-ANTNMFTYEIAPV 109 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~--~-~~~~~~~~~~~~~ 109 (480)
-|.+++...+..+| ++.+..++++.++++...+... ..|++...-+...++++. ..+.. + ..-.++..+.+.+
T Consensus 30 iP~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~~--~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG 106 (939)
T TIGR00461 30 VPPNILKRRPLQLE-APSKEYEALAHLKKIASKNHKF--KSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQG 106 (939)
T ss_pred CCHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCCc--cccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhH
Confidence 35667655567788 4678999999998887655432 123333222222333443 33321 1 1112344566777
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH---
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA--- 186 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~--- 186 (480)
.-+.-.+...+++++.|++..+..+..++|.+....+++.+.. ++ + +.+|++++..|+.....++
T Consensus 107 ~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~-------~~----~-~~~vlv~~~~hP~~~~v~~t~a 174 (939)
T TIGR00461 107 RLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS-------KK----K-ANKFFVAKDLHPQTKSVLHTRA 174 (939)
T ss_pred HHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh-------cC----C-CCEEEECCCCCcchHHHHHHHH
Confidence 7777778899999999999888999999998777555554322 11 1 2379999999999776555
Q ss_pred -HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 187 -VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 187 -~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
..|+ +++.+ |+++|++.+ + +++|++++| |..|.+.|+++|.++++++|.++++++-.-.
T Consensus 175 ~~~g~---~v~~~--------~~~~l~~~~--~------~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~a 234 (939)
T TIGR00461 175 KPFGI---EVIVV--------DCSDIKKAV--D------VFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMA 234 (939)
T ss_pred HhcCc---EEEEE--------cHHHHhhcC--C------EEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHH
Confidence 4455 66665 444565554 2 788999999 6789999999999999999999999776555
Q ss_pred cccccccccCcccCCCCCCccceeCccccCC----CcccceEEEEeCchhhHhhhcCCccccccc--cc-----------
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMG----TLLQCSTIHFKQDGLLISCNQMSAEYLFMQ--DK----------- 328 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~----~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~~----------- 328 (480)
..+..+...+ ++|+++.+.++|+. ++++.|++.+++. +.+. .|+-+.+. +.
T Consensus 235 l~ll~~Pge~-------GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~-l~r~----lPgrivG~s~D~~G~~~~~l~Lq 302 (939)
T TIGR00461 235 LTLLTPPGHY-------GADIVLGSSQRFGVPMGYGGPHAAFFAVKDE-YNRK----MPGRIVGVSKDALGNTALRLALQ 302 (939)
T ss_pred hCCcCCHHHc-------CCcEEeeCCCccCCCCCCCCCceeeeeecHh-hHhh----CCCCceeEEecCCCCccceeecc
Confidence 5555555555 99999777777654 1233788887764 3322 22222221 11
Q ss_pred --ccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 329 --LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 329 --~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
+..-+.+-.+.++-.+....++.+.+.+..+|.+|++++.++...++.++.+.|.+ .|++++.++.+..+.+.+..
T Consensus 303 tReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~--~G~~~~~~~fF~~~~v~~~~ 380 (939)
T TIGR00461 303 TREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN--DPHELINKTWFDTLTVKVGN 380 (939)
T ss_pred cccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCCCccceEEEEeCC
Confidence 00111111111110000012223344467789999999999999999999999999 89999877666777775410
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.. ..++.+++.++|+. +.. .. .+.+++| .+..+|++||+.+++.+.
T Consensus 381 ~~----------------~~~i~~~~~~~gi~-l~~---~~-~~~i~~s-~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 381 GI----------------SSELLKAAEEFNIN-LRA---VD-TTTVGIA-LDETTTKADVENLLKVFD 426 (939)
T ss_pred CC----------------HHHHHHHHHHCCCe-eee---cC-CCEEEEE-eecCCCHHHHHHHHHHhc
Confidence 11 24678888889855 332 12 3589999 899999999999999984
No 176
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=2.7e-19 Score=177.35 Aligned_cols=320 Identities=10% Similarity=-0.011 Sum_probs=207.7
Q ss_pred hHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC----CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 88 MAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW----QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~----~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
.+.+.+..... ....|....+..++.+.+.+++.+.+|. ++ .++++|+|+++++..++.+..+
T Consensus 45 ~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~----------- 112 (393)
T TIGR03538 45 FVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVIN----------- 112 (393)
T ss_pred HHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcC-----------
Confidence 34455555433 2344554555678888888888887664 44 3689999999999998887764
Q ss_pred CccCCce-EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 163 SAIKGQL-VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 163 ~~~~g~~-~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
||+. .|+++.++++.+...+...|. +++.+|++++ +.+|++++++++.+. +++|++++++||||.
T Consensus 113 ---~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~ 180 (393)
T TIGR03538 113 ---PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGA 180 (393)
T ss_pred ---CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCc
Confidence 4452 588899999998888898888 7889998643 578999999988654 889999999999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEeeccccccccccccccCccc---CCC----CCCccceeCcccc-CCCcccceEEEEeC
Q psy12303 240 FDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRL---TGI----ERADSVTWNPHKL-MGTLLQCSTIHFKQ 308 (480)
Q Consensus 240 ~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~---~~~----~~~D~~~~s~hK~-~~~p~~~g~~~~~~ 308 (480)
+.+ +++|.++|++||+++++|++|............+.. ... ..--+++.|++|. +..+..+|+++. +
T Consensus 181 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~ 259 (393)
T TIGR03538 181 VLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-D 259 (393)
T ss_pred ccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec-C
Confidence 977 788899999999999999999876532110000000 000 0112567799995 555578999875 4
Q ss_pred chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 309 DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
+..+....... .+.. .....+...+++..+. .+.+++..+...+..+.+.+.|++ .
T Consensus 260 ~~l~~~~~~~~-~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~-~- 316 (393)
T TIGR03538 260 AEILKAFLRYR-TYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQ-V- 316 (393)
T ss_pred HHHHHHHHHHH-Hhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh-h-
Confidence 44444332111 0100 0012223333333332 345666677778888888888887 4
Q ss_pred CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeC-------CcccEEEEecccC
Q psy12303 388 KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLN-------DLPNFFRNIISSA 459 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~-------~~~~~~R~~~~~~ 459 (480)
+.+ ..|..+.++|.-.+ .. ..++.+.+.+ .|+.+.....+. ...+++|+++..
T Consensus 317 -~~~-~~p~gg~f~~~~~~--~~--------------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~- 377 (393)
T TIGR03538 317 -LDL-ELPDAGFYLWPKVP--GD--------------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA- 377 (393)
T ss_pred -Ccc-cCCCeeEEEEEECC--CC--------------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-
Confidence 333 35777777765443 10 1245566654 565443332211 114799999543
Q ss_pred CCCHHHHHHHHHHHHHh
Q psy12303 460 AVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~~ 476 (480)
++++++..+++|+++
T Consensus 378 --~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 378 --PLEECVEAAERIRSF 392 (393)
T ss_pred --CHHHHHHHHHHHHHh
Confidence 589999999999875
No 177
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=9.2e-20 Score=178.42 Aligned_cols=292 Identities=13% Similarity=0.043 Sum_probs=196.5
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|++++++++|+|+++++..++.+... ||+..|+++.+.+..+...++..|. +
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~--------------~g~~~vlv~~p~y~~~~~~~~~~g~---~ 124 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV--------------PGRDAVLVTPPVFGMYAVCARLQNA---P 124 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC--------------CCCCeEEEcCCChHHHHHHHHHcCC---E
Confidence 4567778888999888999999999999888876643 4434788888888878888888888 8
Q ss_pred eEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccc
Q psy12303 195 CVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 195 v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~ 269 (480)
++.+|.++ ++.+|++++++.+... ++++|++++++||||.+.+.+++.++++. +++++++|++|..+...
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV 199 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC
Confidence 88999742 2467888886654321 28899999999999999999888888875 47999999999876531
Q ss_pred cccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
+.... ..... .--+++.|++|.++ .+..+|+++. +++++.........|- ..
T Consensus 200 -~~~~~-~~~~~-~~vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~~-----------------------~~ 252 (364)
T PRK04781 200 -PSAVG-LLARY-DNLAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPYP-----------------------VP 252 (364)
T ss_pred -cchHH-HHhhC-CCEEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCCC-----------------------CC
Confidence 11000 11111 11256679999998 5578999885 4555554433222221 11
Q ss_pred chHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 349 IFKLWLQWRAK--G-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 349 ~l~~~~~l~~~--g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
.+...++...+ + .+...+.+++..+.++.+.+.|++ ++++..+.++. ++++|...+ . .
T Consensus 253 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p~~-g~f~~~~~~-~----------------~ 313 (364)
T PRK04781 253 TPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQ-LPGVRRVYPSQ-GNFLLVRFD-D----------------A 313 (364)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCeECCCC-CcEEEEEcC-C----------------H
Confidence 22222222222 2 234556666777888999999998 77875334444 555443222 1 1
Q ss_pred HHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 426 PILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++.+.+.+.|+.+.....+.+..+++|+++. +.++.++++++|+++..
T Consensus 314 ~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 314 EAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQA 362 (364)
T ss_pred HHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHHh
Confidence 35667788888665554333333579999943 68999999999988653
No 178
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.87 E-value=7.3e-20 Score=175.86 Aligned_cols=373 Identities=18% Similarity=0.171 Sum_probs=211.0
Q ss_pred CCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHH-HHH--HHcCc-CCcchhcCh
Q psy12303 33 YHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGE-WLI--ATANT-NMFTYEIAP 108 (480)
Q Consensus 33 ~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~--~~~~~-~~~~~~~~~ 108 (480)
.-|.+++...+.++|+ +.+..++++.++++...+.. ...|++........|+++.+ .++ .++.. .++..+.+.
T Consensus 30 ~IP~~i~~~~~~~lp~-~~sE~e~~r~~~~la~kN~~--~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQ 106 (429)
T PF02347_consen 30 DIPEEIRLKKPLNLPE-PLSEYELLRHLERLASKNKS--YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQ 106 (429)
T ss_dssp TS-GGG-SS-----------HHHHHHHHHHHHTTS----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBH
T ss_pred hCCHhhcCCCCCCCCC-CCCHHHHHHHHHHHHhcCCC--CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHH
Confidence 4577777666778884 58999999999998876654 45566666656666777766 443 23332 234456688
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
+.-+.-.+...+++++.|++..+..+..++|.+-..++++.|... ++ +.+|+++...|+.....++..
T Consensus 107 G~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~-----~~-------~~~vlv~~~~hP~~~~v~~t~ 174 (429)
T PF02347_consen 107 GRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATK-----RK-------RNKVLVPESLHPQTRAVLRTY 174 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHT-----T----------EEEEETTS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcc-----cC-------CcEEEEcCCcChhhHHHHHHh
Confidence 888888899999999999998788999999977776655555421 11 238999999999988866654
Q ss_pred CC-CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 189 GL-GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 189 g~-~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.. ...+++.+|.++++..| ++ .+++|++++| |..|.++++++|.++++++|..+++ ++.-...
T Consensus 175 a~~~g~~iv~~~~~~~~~~d--------~~------~~a~v~vq~P-n~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL 238 (429)
T PF02347_consen 175 AAPLGIEIVEVPLDEDGTTD--------DD------DTAAVMVQNP-NTFGVFEDIKEIADIAHAAGALVIV-GADPNAL 238 (429)
T ss_dssp CCHCCEEEEEE-BBTTCSB---------ST------TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGC
T ss_pred hhhCCeEEEEecccccCCcc--------cc------CeEEEEeecC-CCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHH
Confidence 21 11278888888877776 23 3999999999 5689999999999999999999988 6543322
Q ss_pred c-ccccccCcccCCCCCCccceeCccccCCCccc-----ceEEEEeCchhhHhhhcCCccccccccc-------------
Q psy12303 268 L-LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ-----CSTIHFKQDGLLISCNQMSAEYLFMQDK------------- 328 (480)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-----~g~~~~~~~~~~~~~~~~~~~~l~~~~~------------- 328 (480)
. ..+...+ ++|+++.+ ||.++.|.+ +|++.+++. +.+ ..|+.+.+...
T Consensus 239 ~~l~~Pge~-------GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r----~lPGRiVG~t~D~~G~~~~~ltLq 305 (429)
T PF02347_consen 239 GGLKSPGEY-------GADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVR----QLPGRIVGQTKDADGKRAFVLTLQ 305 (429)
T ss_dssp CTC--GGGG-------T-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGG----GS-S-EEEEEEBCCCSCCEEEE-G
T ss_pred hCcCChhhc-------CccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhh----hCCCceecccccccccceeeeccc
Confidence 2 2222234 89999655 887777753 577777665 332 23333332111
Q ss_pred --ccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 329 --LYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 329 --~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
+..-+.+-.+.++ |+.. ..++.++..+..+|.+|+++..++...++.|+.+.|.+ ..++.+ ..+....++....
T Consensus 306 tREQHIrReKAtSNI-ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~-~~~~~~-~~~~f~e~v~~~~ 382 (429)
T PF02347_consen 306 TREQHIRREKATSNI-CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKK-IYGLPF-DNPFFFEFVVVFS 382 (429)
T ss_dssp GGTCHHHGCCSTT----SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTBECS-SSSSBSSEEEEES
T ss_pred cccccccccchhhhh-hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH-hcCccc-CCCCceeeeeecC
Confidence 1010111111112 2211 23456677788899999999999999999999999999 645544 3444444443322
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
+. ... .++.++....| +.. .... .+.+-+| +...+|++|||++++++
T Consensus 383 ~~-----------~~~----~~l~~~~~~~g---l~~-~~~~-~~~~li~-~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 383 KD-----------KEV----EELLKRGIEGG---LNL-RYPD-DGALLIC-VTETRTKEDIDRLVEAF 429 (429)
T ss_dssp S------------HHH----HHHHHTT-------EEE-GGG--SSEEEEE---TT--HHHHHHHHH--
T ss_pred Cc-----------HHH----HHHHHHHHhcC---CCc-cccC-CCeEEEE-ccCCCCHHHHHHHHhcC
Confidence 11 001 13555555566 222 2223 3588899 88999999999999864
No 179
>PLN02271 serine hydroxymethyltransferase
Probab=99.87 E-value=8e-20 Score=179.35 Aligned_cols=324 Identities=14% Similarity=0.090 Sum_probs=202.5
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCC----CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQG----GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV 181 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~----~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~ 181 (480)
......++|....+...++||++. .++ -.-+||.||+.++.+..+ ||| .|+..+..|..+
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNV-Qp~SGs~AN~aV~~ALl~--------------PGD-~IL~ldl~~GGH 251 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNV-QPYSCTSANFAVYTGLLL--------------PGD-RIMGLDSPSGGH 251 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccce-eeccHHHHHHHHHHHhcC--------------CCC-EEEEecCCCCCc
Confidence 345567899999999999999875 343 334899999999988754 667 677765554443
Q ss_pred HHH---------HHHcCCCCCCeEEee--CC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH
Q psy12303 182 RSC---------AAVCGLGTDNCVEVP--SD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI 249 (480)
Q Consensus 182 ~~~---------~~~~g~~~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i 249 (480)
... +...|+ .+..+| +| +++.+|.+++++..... +|++|++.+..++ ...|+++|++|
T Consensus 252 lshg~~~~~g~~vs~sG~---~~~~vpY~~d~~~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~eI 321 (586)
T PLN02271 252 MSHGYYTPGGKKVSGASI---FFESLPYKVNPQTGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWDYARFRQI 321 (586)
T ss_pred hhcccccccccccccccc---eEEEEEcccccccCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCCHHHHHHH
Confidence 222 233444 344444 65 46899999999855332 2999999766655 66899999999
Q ss_pred HHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccc-
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDK- 328 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~- 328 (480)
|+++|+++++|+||..|.+....+.. . +..+|++++++|||+.+|.| |++++++... .........+-.....
T Consensus 322 AdevGA~LmvD~AH~aGLIa~g~~~s-P---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~-~~~~g~~gs~s~~~~~~ 395 (586)
T PLN02271 322 ADKCGAVLMCDMAHISGLVAAKECVN-P---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK-LRKQGMLLSHGDDNSHY 395 (586)
T ss_pred HHHcCCEEEEECcccccccccCcCCC-C---CcCCcEEEeCCcccCCCCCc-eEEEeccccc-ccccCCccccccccccH
Confidence 99999999999999999987765433 1 23789999999999999998 7777765311 1100000000000000
Q ss_pred ccCcccCCC-CccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEee
Q psy12303 329 LYDVRYDTG-DKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYL 405 (480)
Q Consensus 329 ~~~~~~~~~-~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~ 405 (480)
......+.. -.++++|... ...++..+++......+.++.++..++++.|.+.|.+ .|++++..- +...+.+...
T Consensus 396 d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~--~G~~vv~ggTdnHlvLvDl~ 473 (586)
T PLN02271 396 DFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLR--RKCRLVTGGTDNHLLLWDLT 473 (586)
T ss_pred HHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH--CCCeEeeCCCCcceeeecCc
Confidence 000000000 0123333333 2344555566554556789999999999999999999 799998643 3344444332
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-----cccEEEEec---ccCCCCHHHHHHHHHHHHHhh
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-----LPNFFRNII---SSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-----~~~~~R~~~---~~~~~t~~di~~~~~~l~~~~ 477 (480)
+..+. .....+.|-.-|+. +......+ .+..+|+.. ......++|++.+.+.|.+++
T Consensus 474 ~~g~~--------------G~~ae~~Le~~~I~-~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~ 538 (586)
T PLN02271 474 TLGLT--------------GKNYEKVCEMCHIT-LNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAA 538 (586)
T ss_pred ccCCC--------------HHHHHHHHHHcCeE-eccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 22211 12334444445532 22111111 146799883 334556799999888887765
Q ss_pred c
Q psy12303 478 H 478 (480)
Q Consensus 478 ~ 478 (480)
+
T Consensus 539 ~ 539 (586)
T PLN02271 539 Q 539 (586)
T ss_pred h
Confidence 4
No 180
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.87 E-value=1.5e-19 Score=174.51 Aligned_cols=331 Identities=15% Similarity=0.055 Sum_probs=196.8
Q ss_pred HHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeE
Q psy12303 54 QKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSI 133 (480)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~ 133 (480)
++.++.+++....+-+..-..|++....+..... ..+.+..+. +...+.+++.+.+++++|.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~-~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g~~~e~il 75 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEE-DLELLETYV-----------GPAIFEEKVQELGREHLGGPEEKIL 75 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHH-HHHHHHHhc-----------CCHHHHHHHHHHHHHHcCCCcceEE
Confidence 4556666666654433333456665544432222 223343331 2347778888899999999877899
Q ss_pred ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec---CCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHH
Q psy12303 134 LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS---DQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSE 210 (480)
Q Consensus 134 ~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~---~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~ 210 (480)
+++||++||..++.+..+ ||+ .|++. .+.|.++...++..|. +++ ..+ ++++
T Consensus 76 v~~gg~~a~~~~~~al~~--------------~gd-~Vli~~~d~p~~~s~~~~~~l~ga---~~~--~~~-----~l~~ 130 (346)
T TIGR03576 76 VFNRTSSAILATILALEP--------------PGR-KVVHYLPEKPAHPSIPRSCKLAGA---EYF--ESD-----ELSE 130 (346)
T ss_pred EECCHHHHHHHHHHHhCC--------------CCC-EEEECCCCCCCchhHHHHHHHcCC---EEe--ccC-----CHHH
Confidence 999999999999988764 556 55532 5799999999999987 432 221 4444
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHcCcEEEeecccccccccc-ccccCcccCCCCCCcc
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKYNMWLHVDAAWGGGLLLS-KKYRHPRLTGIERADS 286 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~-~~~~~~~~~~~~~~D~ 286 (480)
++. . .++++|+++ +++++|.+ .||++|+++|+++|+|+++|+||+.+.... .... .. .. ++|+
T Consensus 131 l~~----~----~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~--~~-~~-~~di 197 (346)
T TIGR03576 131 LKK----I----DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPP--AL-DL-GADL 197 (346)
T ss_pred Hhh----C----cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCC--HH-Hc-CCcE
Confidence 321 1 126777775 46889998 789999999999999999999999875421 1110 11 11 4689
Q ss_pred ceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHH
Q psy12303 287 VTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEK 366 (480)
Q Consensus 287 ~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~ 366 (480)
++.+++|++.++ ..|+++ .+++.++.......+|... .....+++++..+.....+.
T Consensus 198 vv~s~SKalaG~-r~G~v~-~~~~li~~l~~~~~~~~~s---------------------~~~~~~~aa~~aL~~~~~~~ 254 (346)
T TIGR03576 198 VVTSTDKLMDGP-RGGLLA-GRKELVDKIKSVGEQFGLE---------------------AQAPLLAAVVRALEEFELSR 254 (346)
T ss_pred EEeccchhcccc-ceEEEE-eCHHHHHHHHHhhcCcccC---------------------ccHHHHHHHHHHHhhccHHH
Confidence 999999977543 456666 4555655554433333321 11222333333332111234
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC
Q psy12303 367 QIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN 446 (480)
Q Consensus 367 ~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~ 446 (480)
+.+...++.+++.+.+.. + .+. ++..+ +.|.-.+.. +. .......|.+.|+++++...+.
T Consensus 255 ~~~~l~~r~~~~~~~l~~-~---~~~-~~~~~-f~~~~~~~~----~~----------~~~~~~ll~~~gV~v~~~~~f~ 314 (346)
T TIGR03576 255 IRDAFKRKEEVYLRLFDK-L---NVE-RTPTG-FVIKGVEEE----KL----------IEIGLDLLRNYGIITITAVGMP 314 (346)
T ss_pred HHHHHHHHHHHHHHHHHh-C---CCC-cCCCe-EEEEeCCCC----CH----------HHHHHHHHHhCCEEEeCCcccC
Confidence 455666666666666655 3 222 22333 333222210 00 0233455666776555433333
Q ss_pred CcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 447 DLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 447 ~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+..+++|+++....-++.++++++++|++.+
T Consensus 315 ~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 315 GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 3357999996543323348999999998764
No 181
>PRK07908 hypothetical protein; Provisional
Probab=99.87 E-value=1.1e-19 Score=177.35 Aligned_cols=281 Identities=13% Similarity=0.129 Sum_probs=185.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++++++.+|+++.++++|+|+++++..++. . . | + .+++..+++......++..|+ ++
T Consensus 62 ~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l-~--------------~-~-~viv~~P~y~~~~~~~~~~G~---~i 120 (349)
T PRK07908 62 RARAAVAARHGRTPDEVLLLAGAAEGFALLAR-L-R--------------P-R-RAAVVHPSFTEPEAALRAAGI---PV 120 (349)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-c-C--------------C-C-eEEEeCCCChHHHHHHHHcCC---EE
Confidence 46677888889988899999999999887775 2 1 3 2 244456778777888888888 88
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccC
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH 275 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~ 275 (480)
+.+|.++++.+|+++++ +. ++++++++++||||.+.+.++|.++|++ +.++++|++|+.... ... .
T Consensus 121 ~~v~~~~~~~~d~~~l~----~~------~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~-~~~--~ 186 (349)
T PRK07908 121 HRVVLDPPFRLDPAAVP----DD------ADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVP-GEP--E 186 (349)
T ss_pred EeeccCcccCcChhHhc----cC------CCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhcc-CCc--c
Confidence 89999877888987542 22 7799999999999999999999999974 789999999986431 111 1
Q ss_pred cccCCCCCCccce-eCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH
Q psy12303 276 PRLTGIERADSVT-WNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW 353 (480)
Q Consensus 276 ~~~~~~~~~D~~~-~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~ 353 (480)
.+...+..+++. .|++|.++ .+..+|+++. ++..++........+. .+ .....+.
T Consensus 187 -~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~-~~~~~~~~~~~~~~~~------------~~---------~~~~~a~ 243 (349)
T PRK07908 187 -SLAGDDLPGVLVLRSLTKTWSLAGLRVGYALG-APDVLARLTRGRAHWP------------VG---------TLQLEAI 243 (349)
T ss_pred -ccccccCCCEEEEeecccccCCccceeeeeec-CHHHHHHHHhcCCCCC------------cc---------HHHHHHH
Confidence 111111224444 48999887 5577899986 4455544332211110 00 0011111
Q ss_pred HH-HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 354 LQ-WRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 354 ~~-l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
.. +...+.+.+++..++..++++++.+.|++ . ++++.. |..+.+.+...+. ...+.+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~-p~~g~~~~~~~~~-----------------~~~~~~~l 303 (349)
T PRK07908 244 AACCAPRAVAEAAADAARLAADRAEMVAGLRA-V-GARVVD-PAAAPFVLVRVPD-----------------AELLRKRL 303 (349)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHh-C-CcEecc-CCCceEEEEECCc-----------------HHHHHHHH
Confidence 11 11112345677788888899999999999 6 888754 4445544432221 12456677
Q ss_pred HhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 433 MQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++|+.+.....+.+ ..+++|+++ .+++++++++++|+++..
T Consensus 304 ~~~gI~v~~g~~f~~~~~~~vRis~----~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 304 RERGIAVRRGDTFPGLDPDYLRLAV----RPRAEVPVLVQALAEILK 346 (349)
T ss_pred HhCCEEEEECCCCCCCCCCeEEEEe----CCCccHHHHHHHHHHHHh
Confidence 777855444332322 157999994 368899999999998754
No 182
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=2.8e-19 Score=177.67 Aligned_cols=291 Identities=16% Similarity=0.134 Sum_probs=187.0
Q ss_pred HHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC-
Q psy12303 115 TVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT- 192 (480)
Q Consensus 115 ~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~- 192 (480)
.++.+++++++|.+ .+.+++++||++|+..++++++.. |. +.+|......|.+...+....|...
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~--------g~-----~~ii~~~~~yhg~~~~~~~~~~~~~~ 154 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT--------GR-----TKIVAAEGGFHGRTMGALALTGQPAK 154 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH--------CC-----CeEEEECCCcCCccHHHHhccCCccc
Confidence 46778899988864 357999999999999999988762 21 2245554556666555554444210
Q ss_pred --------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEee
Q psy12303 193 --------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVD 260 (480)
Q Consensus 193 --------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD 260 (480)
..+..+|. .|+++|++.+++. +++|+++.+++++|.+.| +++|.++|++||+++|+|
T Consensus 155 ~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~------~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D 223 (398)
T PRK03244 155 RAPFEPLPGGVEHVPY-----GDVDALAAAVDDD------TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLD 223 (398)
T ss_pred ccCCCCCCCCceEeCC-----CCHHHHHHhhcCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12344443 2789999888532 889999999999999987 899999999999999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
++|+++......+.. ...++ ..|+++ +.|++++++++|+++.+++ +.+..... . .. .++
T Consensus 224 Ev~~g~gr~g~~~~~-~~~~~-~pDi~t--~sK~l~~G~~ig~~~~~~~-~~~~~~~~----~-~~----------~t~- 282 (398)
T PRK03244 224 EVQTGIGRTGAWFAH-QHDGV-TPDVVT--LAKGLGGGLPIGACLAFGP-AADLLTPG----L-HG----------STF- 282 (398)
T ss_pred ccccCCcccchHHhh-hhhCC-CCCEEE--EchhhhCCcccEEEEEcHH-HHhhccCC----C-Cc----------CCC-
Confidence 999875432222211 12334 578776 4699998788999997654 33322110 0 00 000
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecCccCCCchhhHH
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
.+.+....++..+|+.+.. .+..++..++.++|.+.|++ . ++.++.. ....++.+.+ +..
T Consensus 283 --~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~v~g~g~~~~i~~-~~~---------- 344 (398)
T PRK03244 283 --GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEA-L-GHPLVDHVRGRGLLLGIVL-TAP---------- 344 (398)
T ss_pred --CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHh-c-CCCceeeEeeccEEEEEEE-ecc----------
Confidence 1111222233333433322 24567788889999999988 4 3322211 2233333333 211
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....+.+.+.++|.++ .+. + .+++|++ ++..+|++||++++++|++++++
T Consensus 345 -----~~~~~~~~l~~~Gv~~-~~~---~-~~~iR~~-p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 345 -----VAKAVEAAAREAGFLV-NAV---A-PDVIRLA-PPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -----HHHHHHHHHHHCCeEE-eec---C-CCEEEEE-CCCcCCHHHHHHHHHHHHHHHHh
Confidence 0245778888898554 331 2 4789999 88889999999999999988764
No 183
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=6.4e-21 Score=180.96 Aligned_cols=171 Identities=23% Similarity=0.240 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
+-.++.+.+++++|.+. ..++++|+|.++..++.++.. ||+ .|+++..+|.|+..++...|.
T Consensus 60 ~i~~~~~~~A~~~ga~~-~~~~~~Gst~a~~~~l~al~~--------------~gd-~Vlv~~~~h~s~~~~~~~~g~-- 121 (294)
T cd00615 60 PIKEAQELAARAFGAKH-TFFLVNGTSSSNKAVILAVCG--------------PGD-KILIDRNCHKSVINGLVLSGA-- 121 (294)
T ss_pred HHHHHHHHHHHHhCCCC-EEEEcCcHHHHHHHHHHHcCC--------------CCC-EEEEeCCchHHHHHHHHHCCC--
Confidence 34556777999999864 344599999999988877653 556 889999999999999999887
Q ss_pred CCeEEeeCCC--C----CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 193 DNCVEVPSDK--R----GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 193 ~~v~~v~~~~--~----~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
++++++.+. + +.+|++++++++++. ..+++|+++++ |++|.+.|+++|.++|+++|++++||+||+..
T Consensus 122 -~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~----~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~ 195 (294)
T cd00615 122 -VPVYLKPERNPYYGIAGGIPPETFKKALIEH----PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAH 195 (294)
T ss_pred -EEEEecCccCcccCcCCCCCHHHHHHHHHhC----CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhh
Confidence 677776643 2 479999999999753 23889999998 68999999999999999999999999999875
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
..+.+.... ... ..++|+++.|+||+++++.++|++.+++.
T Consensus 196 ~~~~~~~~~-~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 196 FRFHPILPS-SAA-MAGADIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred hccCcccCc-chh-hcCCcEEEEchhcccchHhHHHHHHhCCC
Confidence 433332211 111 12789999999999988777788877654
No 184
>PRK08175 aminotransferase; Validated
Probab=99.87 E-value=9.2e-19 Score=173.63 Aligned_cols=334 Identities=10% Similarity=0.056 Sum_probs=212.1
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
++.....+.....+.....|....+..++.+.+.+++.+.+|. ++. ++++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~---------- 113 (395)
T PRK08175 44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLD---------- 113 (395)
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC----------
Confidence 3334434443333333345655566788889999999887775 444 799999999998877766543
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
||+ .|+++.++|+.+...+...|. +++.+|.++++ .+++++++++++. ..++++|++++++||||.+.
T Consensus 114 ----~gd-~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~ 181 (395)
T PRK08175 114 ----HGD-TVLVPNPSYPIHIYGAVIAGA---QVRSVPLVEGV-DFFNELERAIRES---YPKPKMMILGFPSNPTAQCV 181 (395)
T ss_pred ----CCC-EEEEcCCCCcchHHHHHHcCC---eEEEEecccCC-CcHHHHHHHHhhc---cCCceEEEEeCCCCCCCCCC
Confidence 556 788999999998888888887 78889887543 3578888887642 12388999999999999998
Q ss_pred Ch---HHHHHHHHHcCcEEEeeccccccccccccccCcccCCC---CCCccceeCccccCCCc-ccceEEEEeCchhhHh
Q psy12303 242 PI---EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI---ERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLIS 314 (480)
Q Consensus 242 ~l---~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~ 314 (480)
+. ++|.++|++||+++++|++|+......... . .+..+ .+..+++.|+.|.++.| ..+|+++. ++++...
T Consensus 182 ~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~-~-~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~~ 258 (395)
T PRK08175 182 ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA-P-SIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVSA 258 (395)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCC-c-chhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHHH
Confidence 76 789999999999999999998654311110 1 11111 12235578999999755 56888874 5555543
Q ss_pred hhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 315 CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
..... .+... +........+...+.. ....++++.++..+..+++.+.|++ . ++.+ ..
T Consensus 259 ~~~~~-~~~~~-----------------~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~-~~ 316 (395)
T PRK08175 259 LARIK-SYHDY-----------------GTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHE-A-GWMV-EM 316 (395)
T ss_pred HHHHH-hhccc-----------------CCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcc-cC
Confidence 32111 10000 0000111112222221 2445666777778888999999999 5 7765 35
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHH
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
|..+.+.+.-.+......+ ..++...+. +.|+.+.+...+.. ..+++|+++. .+++.+...++.
T Consensus 317 p~~g~~i~i~l~~~~~~~~-----------~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~ 382 (395)
T PRK08175 317 PKASMYVWAKIPEPYAAMG-----------SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRG 382 (395)
T ss_pred CCEEEEEEEECCcccCCCC-----------HHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHH
Confidence 6566655543333221100 135556555 45644433222211 1469999953 478999999999
Q ss_pred HHHhhcc
Q psy12303 473 MDRLGHD 479 (480)
Q Consensus 473 l~~~~~~ 479 (480)
|.+++++
T Consensus 383 l~~~l~~ 389 (395)
T PRK08175 383 IKAMFRA 389 (395)
T ss_pred HHHHHHh
Confidence 9887653
No 185
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.2e-19 Score=176.17 Aligned_cols=290 Identities=9% Similarity=0.012 Sum_probs=195.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|++++++++|+|+++++..++.+..+ ||+ .|++..++|+.+...+..+|. ++
T Consensus 71 ~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~--------------~gd-~vlv~~p~y~~~~~~~~~~g~---~~ 132 (369)
T PRK08153 71 DLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVE--------------PGD-PVVTSLGAYPTFNYHVAGFGG---RL 132 (369)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEECCCcchHHHHHHHHcCC---eE
Confidence 566778888899888999999999988888776654 556 888999999999888888887 78
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeeccccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~~ 273 (480)
+.+|.+.+ .+|++++++.+... ++++|++++|+||||.+.+.+++.++++.+ ++++++|++|+........
T Consensus 133 ~~vp~~~~-~~~~~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~- 205 (369)
T PRK08153 133 VTVPYRDD-REDLDALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAA- 205 (369)
T ss_pred EEeeCCCC-CCCHHHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccc-
Confidence 88998665 47888887766432 278899999999999999988888877654 8999999999865431111
Q ss_pred cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. .+.....--++..+++|.++ .+..+|+++. +++...........+. ...+..
T Consensus 206 -~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~~l~~~~~~~~-----------------------~s~~~q 259 (369)
T PRK08153 206 -P-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIG-APGTIKAFDKVRNHFG-----------------------MNRIAQ 259 (369)
T ss_pred -h-hhhhcCCCEEEEecchHhccCcchheeeeec-CHHHHHHHHHhhcCCC-----------------------CCHHHH
Confidence 1 11111122356779999998 4467899886 4444443322111110 123333
Q ss_pred HHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
.++...+. .+.+++..+...+..+++.+.|++ .|+... |..+.+.+...+.. . . ....+.+.
T Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~--~g~~~~--p~~~~f~~~~~~~~--~----~-------~a~~l~~~ 322 (369)
T PRK08153 260 AAALAALKDQAYLAEVVGKIAAARDRIAAIARA--NGLTPL--PSATNFVAIDCGRD--G----A-------FARAVLDG 322 (369)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH--CCCccC--CCcCcEEEEECCCC--c----c-------cHHHHHHH
Confidence 33333332 345667777888888899999988 477643 44444444222111 0 0 12467788
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
|.++|+.+..++...+ .+++|+++. +++|+++++++|+++..
T Consensus 323 l~~~Gi~v~~p~~~~~-~~~iRis~~----~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 323 LIARDIFVRMPGVAPL-DRCIRVSCG----PDEELDLFAEALPEALE 364 (369)
T ss_pred HHHCCeEEeeCCCCCC-CCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 8888865433322222 469999943 68999999999998764
No 186
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.7e-19 Score=173.06 Aligned_cols=283 Identities=13% Similarity=0.098 Sum_probs=187.5
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++.+|.++.++++|+|+++++..++.. .. ||+ |++..++++.+...++..|. +
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~~--------------~~~--vv~~~P~y~~y~~~~~~~G~---~ 102 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-IN--------------VGN--IIIVEPNFNEYKGYAFTHGI---R 102 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-hC--------------CCc--EEEeCCChHHHHHHHHHcCC---e
Confidence 4577789999999998999999999999888753 32 433 44447899999999999998 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++.+|+++ ...|.+.+++ . ++++|++++|+||||.+.+ +++|.++|+++++++++|++|+.+.....
T Consensus 103 v~~vp~~~-~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~ 172 (332)
T PRK06425 103 ISALPFNL-INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA 172 (332)
T ss_pred EEEEeCCc-ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc
Confidence 89999875 3445544432 1 3789999999999999977 57777788999999999999987653211
Q ss_pred cccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
.......... .--+++.|++|.++ .+..+|+++.. ++..+.......++. ....
T Consensus 173 ~~~~~~~~~~-~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~~~-----------------------~~~~ 227 (332)
T PRK06425 173 EEDVLLNRSY-GNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEPWS-----------------------VCDP 227 (332)
T ss_pred hhHHHHhccC-CCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCCCc-----------------------cCHH
Confidence 0000011111 12355669999999 55788998864 445444332222111 0111
Q ss_pred HHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
.. ..+.....+ ..++..+...+.++++.+.|++ . |++++.++..+.+.+. .+ . ..++.
T Consensus 228 ~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~~g~f~~~~-~~-~----------------~~~~~ 286 (332)
T PRK06425 228 AI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEA-M-GFRAAGDPSANFITFM-IP-D----------------AHDFY 286 (332)
T ss_pred HH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEECCCCCceEEEEE-cC-C----------------HHHHH
Confidence 11 112221222 2356677888889999999998 4 7877545554444443 22 1 23567
Q ss_pred HHHHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 430 GRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.|.+.|+.+.....+... .+++|+++. +.++.++++++|++++
T Consensus 287 ~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 287 SYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 7888888655544333221 469999943 6899999999999864
No 187
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.86 E-value=2.1e-19 Score=176.73 Aligned_cols=217 Identities=16% Similarity=0.133 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g 189 (480)
.+++++.+++++|.+. +++|+||++|+..++.++.. ||+ .|+++...|.+... .+...|
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al~~--------------~Gd-~Vi~~~~~y~~t~~~~~~~~~~~G 125 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMALLQ--------------AGD-HVVSSRSLFGSTVSLFEKIFARFG 125 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEccCcchhHHHHHHHHHHHcC
Confidence 3445666899999864 89999999999998877643 556 78888888876554 344566
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+ ++++++.+ |+++++++++++ |++|++++++|++|.+.|+++|.++|+++|+++++|++++.+...
T Consensus 126 ~---~v~~vd~~-----d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~ 191 (390)
T PRK08133 126 I---ETTFVDLT-----DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQ 191 (390)
T ss_pred c---EEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 6 78888775 889999988765 899999999999999999999999999999999999998766543
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.+ ... ++|+++.|++|+++++. ..|++++.+...+.... .+... ++....
T Consensus 192 ~p-l~~-------g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~-----------------~g~~~~ 242 (390)
T PRK08133 192 QP-LKL-------GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRT-----------------AGPTLS 242 (390)
T ss_pred Cc-hhh-------CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHH-----------------hCCCCC
Confidence 22 123 68999999999998653 24444444444433221 11100 111134
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
...+|..++ |.+.+..+.++..+++..+.+.|++ .|+++.+.
T Consensus 243 ~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~-~p~v~~v~ 284 (390)
T PRK08133 243 PFNAWVFLK--GLETLSLRMEAHSANALALAEWLEA-HPGVERVF 284 (390)
T ss_pred HHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHh-CCCeeEEE
Confidence 456666654 4567888899999999999999999 88886543
No 188
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.86 E-value=2.7e-19 Score=175.95 Aligned_cols=348 Identities=17% Similarity=0.191 Sum_probs=209.6
Q ss_pred ccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcC
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMF 154 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~ 154 (480)
|+++.+.+.+ .++..+..++..... ..|..+++..++|++ +++++|.+. +++|+|||+|+..++.+..+
T Consensus 22 ~iDlltds~t-~ams~~~~~a~~~gd-~~Y~~~~g~~~Leea----ia~~~g~~~--vv~t~~Gt~Al~la~~al~~--- 90 (431)
T cd00617 22 YIDLLTDSGT-GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDA----VQDLFGFKH--IIPTHQGRGAENILFSILLK--- 90 (431)
T ss_pred CCCCCCCCCc-HHHHHHHHHHHHhCC-CccCCCCCHHHHHHH----HHHHHCCCe--EEEcCCHHHHHHHHHHHhCC---
Confidence 4555444433 222223344433322 347778887777776 667778864 99999999999999887754
Q ss_pred chhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC----------CCCCCHHHHHHHHHHHHHCCCc
Q psy12303 155 PTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK----------RGRLIPSELERLVLERKAKGDI 224 (480)
Q Consensus 155 ~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~----------~~~~d~~~L~~~i~~~~~~~~~ 224 (480)
||+ +| ++...+.+....+...|. ..+.+++++ .|.+|+++|+++|++.. ..+
T Consensus 91 -----------pGD-~V-~~~~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~--~~~ 152 (431)
T cd00617 91 -----------PGR-TV-PSNMHFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG--AEN 152 (431)
T ss_pred -----------CCC-EE-ccCCcccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCccc--CCC
Confidence 667 55 465555566667777887 677777763 25599999999998541 123
Q ss_pred cEEEEeccCCCcc-ccccC---hHHHHHHHHHcCcEEEeecccccccc-cc----ccccCccc-----CCCCCCccceeC
Q psy12303 225 PFFVNCTSGTTVL-GAFDP---IEEIADICQKYNMWLHVDAAWGGGLL-LS----KKYRHPRL-----TGIERADSVTWN 290 (480)
Q Consensus 225 ~~~v~~~~~~~~~-G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~-~~----~~~~~~~~-----~~~~~~D~~~~s 290 (480)
+++|+++.++|++ |.+.+ +++|.++|++||+++|.|+|+..... +. +.+....+ .-...+|++++|
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS 232 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMS 232 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEE
Confidence 7889999999998 87754 67889999999999999999764321 11 11111001 112368999999
Q ss_pred ccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch-HHHHHHHHhcHHHHHHHHH
Q psy12303 291 PHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF-KLWLQWRAKGDEGFEKQID 369 (480)
Q Consensus 291 ~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l-~~~~~l~~~g~~~~~~~~~ 369 (480)
+||.+++|. .|+++.+++++...+.... ..... ...++ +-...-+ ++..+|..... .+.++
T Consensus 233 ~~K~~~~~~-GG~i~~~d~~l~~~~~~~~--~~~~~------~~~~g------G~~~r~~~A~A~gL~e~~~---~~~l~ 294 (431)
T cd00617 233 AKKDGLVNI-GGFLALRDDELYEEARQRV--VLYEG------FVTYG------GMAGRDMEALAQGLREAVE---EDYLR 294 (431)
T ss_pred eecCCCCcc-ceEEEeCcHHHHHHHHHhc--cccCC------ccccc------cccHHHHHHHHHHHHhccc---HHHHH
Confidence 999988865 4677777665655543211 00000 00111 1111111 11213322111 24455
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeee----
Q psy12303 370 RLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQP---- 444 (480)
Q Consensus 370 ~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~---- 444 (480)
+..+.+++|.+.|.+ .|+.++ .|..+..+|.-.+.-....+... +. ...+...|. +.|+..+..+.
T Consensus 295 ~~~~~r~~l~~~L~~--~G~~v~-~P~Ggh~v~~d~~~~~~~~~~~~----~~--~~~la~~L~~e~gV~~~~~g~~~~~ 365 (431)
T cd00617 295 HRVEQVRYLGDRLDE--AGVPIV-EPAGGHAVFIDAREFLPHIPQEQ----FP--AQALAAELYLEAGVRAVELGIFSAG 365 (431)
T ss_pred HHHHHHHHHHHHHHH--CCCCcc-CCCcceEEEEEhHHhcCCCCccc----Cc--HHHHHHHHHHHcCeeEEeecceecc
Confidence 556677999999999 599885 56777666644332111100000 00 233444443 44443332211
Q ss_pred ---eCC-----cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 445 ---LND-----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 445 ---~~~-----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..+ .-..+|+.++-..-|.++++++++.|..+.+
T Consensus 366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~ 407 (431)
T cd00617 366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYE 407 (431)
T ss_pred cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHh
Confidence 111 1368999988778899999999999998765
No 189
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=1.2e-19 Score=178.36 Aligned_cols=222 Identities=14% Similarity=0.151 Sum_probs=160.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR---- 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~---- 182 (480)
.|....+|+ .+++++|.+. .+++++|+.|+..++.+... ||+ .|+++...|.+..
T Consensus 58 ~p~~~~le~----~lA~l~g~~~--av~~~sG~~Ai~~~l~al~~--------------~Gd-~Vi~~~~~y~~t~~~~~ 116 (391)
T TIGR01328 58 NPTVSNLEG----RIAFLEGTEA--AVATSSGMGAIAATLLTILK--------------AGD-HLISDECLYGCTFALLE 116 (391)
T ss_pred CchHHHHHH----HHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEecCcchHHHHHHH
Confidence 454445554 5899999875 78999999999888877643 556 6777877765433
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+...|+ ++.+++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++
T Consensus 117 ~~~~~~G~---~~~~vd~~-----d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a 182 (391)
T TIGR01328 117 HALTKFGI---QVDFINMA-----IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNT 182 (391)
T ss_pred HHHhcCCe---EEEEECCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 33444565 77777765 789999988765 89999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
|+.+....+ ... ++|+++.|++|+++++.. .|++++.+++.............
T Consensus 183 ~a~~~~~~~-~~~-------g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~------------------ 236 (391)
T TIGR01328 183 FATPMLTNP-VAL-------GVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM------------------ 236 (391)
T ss_pred CchhccCCc-hhc-------CCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC------------------
Confidence 987644222 223 789999999999997654 24445566655543321110000
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.|.......+|..++. .+.+..++++..+++.++.+.|++ +|+++.+.
T Consensus 237 -~g~~l~~~~a~l~l~~--L~tl~~r~~~~~~na~~la~~L~~-~p~v~~v~ 284 (391)
T TIGR01328 237 -TGSVISPFDAWLILRG--LKTLNIRMKRHSENAMKVAEYLKS-HPAVEKVY 284 (391)
T ss_pred -CCCCCCcHHHHHHHhC--cCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEE
Confidence 1112345566766654 456677889999999999999999 88876543
No 190
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=1.5e-19 Score=176.75 Aligned_cols=280 Identities=13% Similarity=0.048 Sum_probs=194.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++.+|++++++++|+|+++++..++.+..+ ||+ .|+++.++|+.+...+...|. ++
T Consensus 68 ~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~--------------~gd-~vlv~~P~y~~~~~~~~~~g~---~v 129 (366)
T PRK01533 68 TLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLK--------------AGD-NIVTAGATFPQYRHHAIIEGC---EV 129 (366)
T ss_pred HHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCcHHHHHHHHHHcCC---EE
Confidence 466778888899889999999999999988887754 556 788999999999999999998 88
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHH---HcCcEEEeecccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQ---KYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~---~~~~~l~vD~a~~~~~~~~~~ 272 (480)
+.||.+ ++.+|+++|++++++. +++|++++|+||||.+.+.+++.++++ +++ ++++|++|..+....+.
T Consensus 130 ~~v~~~-~~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~ 201 (366)
T PRK01533 130 KEVALN-NGVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDF 201 (366)
T ss_pred EEeecC-CCCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccC
Confidence 889986 4569999999988654 789999999999999988766666654 555 67889999754422110
Q ss_pred ccCcccCCCC--CCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 273 YRHPRLTGIE--RADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 273 ~~~~~~~~~~--~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.. .+..++ .--+++.|++|.++ .+..+|+++. +++...........|- ...
T Consensus 202 -~~-~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~~-----------------------~~~ 255 (366)
T PRK01533 202 -PE-TLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPFN-----------------------VSS 255 (366)
T ss_pred -cc-hhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCCC-----------------------cCH
Confidence 01 111111 22366779999998 4477898875 4555544332211110 233
Q ss_pred hHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+...++...+. .+..++..+...+..+++.+.+++ . |+++. ++..+.+.+.+ + . ..++
T Consensus 256 ~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~-~-g~~~~-~~~~nf~~~~~-~-~----------------~~~~ 314 (366)
T PRK01533 256 LAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE-N-EIPFY-QSQTNFIFLPV-E-N----------------GGEI 314 (366)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCccC-CCcCcEEEEeC-C-C----------------HHHH
Confidence 34444444442 345566667777788888888888 4 77764 55555444432 2 1 1356
Q ss_pred HHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 429 KGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.|.+.|+.+..+ .+++|+++. +.++.++++++|+++.+
T Consensus 315 ~~~l~~~GI~Vr~~------~~~iRis~~----~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 315 YEACAHAGFIIRPF------PNGVRITVG----TREQNEGVISVLQQHFE 354 (366)
T ss_pred HHHHHHCCcEEccC------CCceEEeCC----CHHHHHHHHHHHHHHHH
Confidence 78888899665542 368999943 78999999999998764
No 191
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.86 E-value=3.8e-19 Score=177.94 Aligned_cols=315 Identities=15% Similarity=0.108 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
......++.+.+++++|.+...+++++|||+|+..++++++... +++.+++.....|.+...++...+
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~------------~~~~ii~~~~~yhg~~~~~~~~~~ 144 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYT------------GRKKIISFEGAYHGRTLGALSLTG 144 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHc------------CCCeEEEECCCcCCccHHHHHhcC
Confidence 35677788888999999655679999999999999999987531 225456666667777666655543
Q ss_pred CC---------CCCeEEeeCCC------CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 190 LG---------TDNCVEVPSDK------RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~------~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
.. ...++.+|.+. ++..|+++|++.+++. +..+++|+++..++++|.+.| +++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~ 221 (413)
T cd00610 145 SKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELC 221 (413)
T ss_pred CccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 21 12456777663 2344888898888652 223788999988888899877 99999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|++|+++......... ...++ ..|+++ +.|++++++++|+++. +++..... . ...+...
T Consensus 222 ~~~~~~li~Dev~~g~g~~g~~~~~-~~~~~-~~d~~t--~sK~l~~g~~~g~~~~-~~~~~~~~-~-~~~~~~~----- 289 (413)
T cd00610 222 RKHGILLIADEVQTGFGRTGKMFAF-EHFGV-EPDIVT--LGKGLGGGLPLGAVLG-REEIMDAF-P-AGPGLHG----- 289 (413)
T ss_pred HHcCCEEEEeccccCCCcCcchhhH-hhcCC-CCCeEE--EcccccCccccEEEEE-cHHHHHhh-c-cCCCCCC-----
Confidence 9999999999999865322211111 12223 457665 4599998888999876 44444432 0 0000000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCceeEEEEEeecC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~ 407 (480)
.++ ++......++..+++.+.. .++.++..++.+++.+.|++ .. ++.....+...++.+.+.+.
T Consensus 290 ------~t~---~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 356 (413)
T cd00610 290 ------GTF---GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRE-LAEKHPLVGDVRGRGLMIGIELVKD 356 (413)
T ss_pred ------CCC---CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-HHhhCCcEEEeecCceEEEEEEecC
Confidence 000 1111222344444554432 35567778888888888876 42 22111134455555555332
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
......+. . ....+.+.|.++|+. +.+.. .+.+|++ ++..+|++||++++++|++++
T Consensus 357 ~~~~~~~~-----~--~~~~~~~~l~~~gv~-v~~~~----~~~lR~~-~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 357 RATKPPDK-----E--LAAKIIKAALERGLL-LRPSG----GNVIRLL-PPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CCcCCcch-----H--HHHHHHHHHHHCCeE-EeecC----CCEEEEE-CCCcCCHHHHHHHHHHHHHhC
Confidence 10000000 0 124577888888844 44321 3689999 888899999999999998753
No 192
>PRK05968 hypothetical protein; Provisional
Probab=99.86 E-value=1.3e-19 Score=178.08 Aligned_cols=216 Identities=13% Similarity=0.147 Sum_probs=155.9
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~ 191 (480)
++.+.+++++|.+. .+++++|+.|+..++.+... ||+ .|+++...|.+.. ..+...|+
T Consensus 67 ~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al~~--------------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~G~- 128 (389)
T PRK05968 67 AFEEMLAKLEGAED--ARGFASGMAAISSTVLSFVE--------------PGD-RIVAVRHVYPDAFRLFETILKRMGV- 128 (389)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCchHHHHHHHHHHHHcCc-
Confidence 34455899999865 57778888999888876543 556 6777777777643 44555676
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++++++.+ |++++++++ +. +++|++++++++++.+.|+++|.++|+++|+++++|++|+.+....+
T Consensus 129 --~v~~vd~~-----d~~~l~~~i-~~------tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p 194 (389)
T PRK05968 129 --EVDYVDGR-----DEEAVAKAL-PG------AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP 194 (389)
T ss_pred --eEEEeCCC-----CHHHHHHhc-cc------CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc
Confidence 77777654 889998887 33 78999999999999999999999999999999999999987653222
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
... ++|+++.|++|++++|.+ .|+++ .+++.+.........++ +.....
T Consensus 195 -~~~-------g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~--------------------g~~~~~ 245 (389)
T PRK05968 195 -ITL-------GVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYL--------------------GAKLSP 245 (389)
T ss_pred -hhc-------CCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhC--------------------CCCCCh
Confidence 223 789999999999998754 45554 55555443321111111 011234
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
..+|..++. .+.+..++++..++++.+.+.|++ +|+++.+..|
T Consensus 246 ~~A~~~l~~--L~tl~~r~~~~~~~a~~la~~L~~-~p~v~~v~~p 288 (389)
T PRK05968 246 FEAWLLLRG--LRTLPLRMKAHEASALEIARRLKA-HPVVERVCHP 288 (389)
T ss_pred HHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECC
Confidence 566665544 556788899999999999999999 8998766543
No 193
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=8.7e-20 Score=178.72 Aligned_cols=221 Identities=19% Similarity=0.172 Sum_probs=160.7
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|...++|+ .+++++|.+. ++++++|++|+..++.++.. ||+ .|+++...|.+....+
T Consensus 38 ~~p~~~~le~----~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~~--------------~gd-~Vl~~~~~y~~~~~~~ 96 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGEA--ALAFSSGMAAISTVLLALLK--------------AGD-HVVASDDLYGGTYRLF 96 (369)
T ss_pred CChhHHHHHH----HHHHHHCCCC--EEEEcCHHHHHHHHHHHHcC--------------CCC-EEEECCCCcchHHHHH
Confidence 4455555555 4888888754 78889999999999988754 446 7888888887765433
Q ss_pred ----HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 186 ----AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 186 ----~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
...|+ ++..++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|+
T Consensus 97 ~~~~~~~g~---~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~ 162 (369)
T cd00614 97 ERLLPKLGI---EVTFVDPD-----DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDN 162 (369)
T ss_pred HHHHhhcCe---EEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 34455 77777765 688999888654 8999999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+|+.+.... ...+ ++|+++.|++|+++++. ..|+++.+++++.+....... +
T Consensus 163 t~~~~~~~~-~~~~-------g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~----------------- 216 (369)
T cd00614 163 TFATPYLQR-PLEL-------GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL-A----------------- 216 (369)
T ss_pred CCcchhcCC-hhhh-------CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH-h-----------------
Confidence 998775422 2233 78999999999998753 256666655344433221110 0
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.+.......+|+.++.+ +.+..++++..+++.++.+.|++ +|+++-+.
T Consensus 217 ---~g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~-~~~v~~V~ 264 (369)
T cd00614 217 ---LGTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEK-HPKVERVY 264 (369)
T ss_pred ---hCCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHc-CCCccEEE
Confidence 01113455667666554 55677889999999999999999 88775443
No 194
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.86 E-value=7.9e-19 Score=175.66 Aligned_cols=316 Identities=12% Similarity=0.093 Sum_probs=222.3
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
..|....+...+.+.+.+++....|. +++++++|+|+++|+..++.+..+ ||+ .|++.+++|+
T Consensus 126 ~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~--------------pGd-~v~vE~PtY~ 190 (459)
T COG1167 126 LQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLD--------------PGD-TVLVEDPTYP 190 (459)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCC--------------CCC-EEEEcCCCcH
Confidence 44555577788888888888866676 456899999999999988877764 666 8999999999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE-EEEeccCCCccccccCh---HHHHHHHHHcCc
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF-FVNCTSGTTVLGAFDPI---EEIADICQKYNM 255 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~-~v~~~~~~~~~G~~~~l---~~I~~i~~~~~~ 255 (480)
....+++.+|+ +++.||+|++| +|+++|++.++.. +|+ +.+....+||||.+.++ ++|.++|++|++
T Consensus 191 ~~~~~~~~~g~---~~~~vp~d~~G-~~~e~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~ 261 (459)
T COG1167 191 GALQALEALGA---RVIPVPVDEDG-IDPEALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDV 261 (459)
T ss_pred HHHHHHHHcCC---cEEecCCCCCC-CCHHHHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCC
Confidence 99999999999 89999998655 9999999999875 144 45777889999999886 789999999999
Q ss_pred EEEeeccccccccccccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR 333 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 333 (480)
|++.|..|+.......... .+.+. .+--+.+.|++|.+..+..+|+++... .+.+.........-.+
T Consensus 262 ~IIEDD~y~el~~~~~p~~--~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~-~~~~~~~~~k~~~~~~-------- 330 (459)
T COG1167 262 LIIEDDYYGELRYDGPPPP--PLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP-ELIEKLLRLKQAADLG-------- 330 (459)
T ss_pred eEEeeCcchhhhcCCCCCC--ChHhhCCCCCEEEEeeehhhcccccceeeeeCCH-HHHHHHHHHHHHhcCC--------
Confidence 9999999998776432211 11111 134467889999999889999999654 3333221110000000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 334 YDTGDKVIQCGRHNDIFKLWLQWRAKG--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 334 ~~~~~~~~~~~r~~~~l~~~~~l~~~g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
+..+....+...+. -| ...+..+.+...+..+.+.+.|.++.++...+..|..+++++.-.|..++
T Consensus 331 ----------~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~- 398 (459)
T COG1167 331 ----------PSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGID- 398 (459)
T ss_pred ----------CChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCC-
Confidence 00011112222233 23 45567777777888889999999844544445678888887766665532
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC----cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++...+.++|+.+...+.... ..+++|+++.+. ++++|++.++.|.+++++
T Consensus 399 -------------~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~--~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 399 -------------ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP--SEEEIEEGIKRLAALLRE 455 (459)
T ss_pred -------------HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence 24677888888877665232221 146999995443 589999999998877653
No 195
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.2e-19 Score=175.20 Aligned_cols=223 Identities=12% Similarity=0.079 Sum_probs=162.1
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|+. ++++.|.+ ++++++||++|+..++.+... ||+ +|+++...|.+....+
T Consensus 51 ~npt~~~Le~~----lA~leg~e--~ivvt~gg~~Ai~~~l~all~--------------~Gd-~Il~~~~~y~~~~~~~ 109 (388)
T PRK08861 51 GNPNRGLLEQT----LSELESGK--GAVVTNCGTSALNLWVSALLG--------------PDD-LIVAPHDCYGGTYRLF 109 (388)
T ss_pred CCchHHHHHHH----HHHHhCCC--eEEEECCHHHHHHHHHHHHcC--------------CCC-EEEEcCCchHHHHHHH
Confidence 34555555554 88888864 599999999999999887643 556 7888888888655544
Q ss_pred HH-cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 186 AV-CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 186 ~~-~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.. ......++++++. .|+++++++++++ |++|++++++||+|.+.|+++|.++|+++|+++++|++|+
T Consensus 110 ~~~~~~~gi~v~~vd~-----~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 110 NTRANKGDFKVQFVDQ-----SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred HHHHhcCCeEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence 22 2111125666643 4889999888765 8999999999999999999999999999999999999998
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
.+....+ ... ++|+++.|+|||+++|.+ .|+++.+++++........ .+
T Consensus 179 ~~~~~~p-l~~-------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~-~~-------------------- 229 (388)
T PRK08861 179 TPVLQKP-LEL-------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG-NC-------------------- 229 (388)
T ss_pred ccccCCC-ccc-------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHH-hc--------------------
Confidence 7754332 233 899999999999998764 4666555554433221100 00
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.|.......+|+.++. .+.+.-+++++.+++..+.+.|++ +|.+.-+
T Consensus 230 ~G~~~~p~~a~l~~rg--l~Tl~lR~~~~~~~a~~~a~~L~~-~p~v~~V 276 (388)
T PRK08861 230 IGATGTPFDSYMTLRG--IRTLGARMRVHEESAQQILAYLQT-QSLVGTI 276 (388)
T ss_pred cCCCCChHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHh-CCCeeEE
Confidence 1222455677766654 677888999999999999999999 8887544
No 196
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-18 Score=167.37 Aligned_cols=288 Identities=16% Similarity=0.182 Sum_probs=210.8
Q ss_pred HHHHHHHHHHhC-CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIG-WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g-~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++.+++.+| .++.+++.++|+++.+...+++.+. ||+ .|+++.+++..+...++..|.
T Consensus 60 ~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~--------------~gd-~vl~~~Ptf~~Y~~~a~~~g~--- 121 (356)
T COG0079 60 RELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVE--------------PGD-TVLIPEPTFSMYEIAAQLAGA--- 121 (356)
T ss_pred HHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhc--------------CCC-EEEEcCCChHHHHHHHHhcCC---
Confidence 356677899999 6777889999999999888888875 555 788999999999999999998
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeeccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~ 271 (480)
+++.||.++ +.+|++.+.++++++ +++|++++|+||||...+.++|.+++... +.++++|+||.-+.-...
T Consensus 122 ~~~~v~~~~-~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~ 194 (356)
T COG0079 122 EVVKVPLKE-FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESS 194 (356)
T ss_pred eEEEecccc-cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchh
Confidence 899999988 999999999999885 88999999999999999888888887754 789999999988765111
Q ss_pred cccCcccCCCCCCc-cceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERAD-SVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D-~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
. . .+. ..-+ ++.=+++|.++.+ ..+|+.+ .+++++........+|-. +.
T Consensus 195 ~-~--l~~--~~~nlivlRTfSKa~gLAGlRlGy~i-a~~~~i~~l~~vr~p~~v-----------------------~~ 245 (356)
T COG0079 195 L-E--LLK--YPPNLIVLRTFSKAFGLAGLRVGYAI-ANPELIAALNKVRPPFNV-----------------------SS 245 (356)
T ss_pred h-h--hcc--CCCCEEEEEecHHhhhcchhceeecc-CCHHHHHHHHHhcCCCCC-----------------------CH
Confidence 0 0 111 1222 3444899977654 6789855 677777777666666532 23
Q ss_pred hHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-EecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 350 FKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFY-LILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 350 l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
++..++...+ -.+.+++..++....++++.+.|++ +. +. ++ +.. .+|++...+.. . ...
T Consensus 246 ~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~-~~-~~~v~-pS~-aNFvlv~~~~~--------------~-~~~ 306 (356)
T COG0079 246 PALAAAIAALRDADYLEESVERIREERERLYAALKA-LG-LFGVF-PSQ-ANFVLVRVPDA--------------E-AAA 306 (356)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh-CC-CCeec-CCC-CcEEEEECCCc--------------c-HHH
Confidence 3444444433 2467788889999999999999999 65 55 43 343 55544332211 0 125
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.|.++|+++..........+++|+++. |+++-++++++|+++.+.
T Consensus 307 l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 307 LAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 678888999776665332222569999954 678889999999987653
No 197
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.85 E-value=8.6e-19 Score=174.36 Aligned_cols=301 Identities=15% Similarity=0.100 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+.+++++|.+ .+++++|||+|+..|+++++.... ..+|.+ +| +.+|..+...|.+...+....+-
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~---~~~g~~--~~~~~vi~~~~~~HG~~~~~~~~~~~ 155 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGY---EVKGVP--EGQAEIIVCADNFHGRTLSIVGFSTD 155 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHH---hccCCC--CCCceEEEECCCcCCccHHHHhccCC
Confidence 34445566688888764 599999999999999999986310 111221 12 33566666667765544432110
Q ss_pred ---------CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 ---------GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ---------~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
....+..+|. .|+++|++++.+. +++|+++++++++|.+.| +++|.++|++||+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~l 224 (401)
T PRK00854 156 PDARGGFGPFTPGFRVVPF-----GDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTL 224 (401)
T ss_pred ccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 0113444443 3889999988653 899999999999999987 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
++|++|++.......+.. ...++ .+|.++++ |++++.+ ++|+++.++ +.+..... ....
T Consensus 225 I~DEv~~g~g~~g~~~~~-~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~-~~~~~l~~-----~~~~---------- 284 (401)
T PRK00854 225 ILDEIQTGLGRTGKLLAE-EHEGI-EADVTLIG--KALSGGFYPVSAVLSNS-EVLGVLKP-----GQHG---------- 284 (401)
T ss_pred EEechhhCCCCCchHhHH-hhcCC-CCCEEEec--ccccCCccCeEEEEEcH-HHHhcccC-----CCCC----------
Confidence 999999854322111111 12333 56887764 9998763 678777644 34332210 0000
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEEEEEeecCccCCCch
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~~~ 414 (480)
.++ ++ ..+..++++..+..-.-....++..++++++.+.|++ .. ...+. .+...++.+.+.+...
T Consensus 285 ~t~---~~---~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~g~g~~~~i~~~~~~~----- 351 (401)
T PRK00854 285 STF---GG---NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRS-IR-SNIVREVRGRGLMLAVELEPEAG----- 351 (401)
T ss_pred CCC---Cc---CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh-hc-cCceEEEeccceEEEEEEecCch-----
Confidence 000 11 2233333333321111133568888899999999988 53 22111 2344445554432210
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
...++.+.|.++|+.+ .. .+ .+++|++ ++..+|++||++++++|++++.
T Consensus 352 ---------~~~~~~~~L~~~GV~v-~~---~~-~~~lR~~-p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 352 ---------GARQYCEALKERGLLA-KD---TH-DHTIRLA-PPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ---------hHHHHHHHHHHCCeEE-ec---CC-CCEEEEe-CCcccCHHHHHHHHHHHHHHhh
Confidence 0235778888888543 32 12 4699999 8889999999999999998754
No 198
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.85 E-value=4.7e-19 Score=174.50 Aligned_cols=213 Identities=15% Similarity=0.122 Sum_probs=155.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~g~~ 191 (480)
++.+.+++++|.+. ..++++|+.|+..++.+... ||+ .|+++...|.+..... ...|+
T Consensus 69 ~Le~~lA~l~G~~~--~~~~~sG~~Ai~~~l~~~l~--------------~Gd-~Vl~~~~~y~~~~~~~~~~~~~~G~- 130 (398)
T PRK07504 69 MFEKRMCALEGAED--ARATASGMAAVTAAILCQVK--------------AGD-HVVAARALFGSCRYVVETLLPRYGI- 130 (398)
T ss_pred HHHHHHHHHhCCCe--eeEecCHHHHHHHHHHHHhC--------------CCC-EEEEcCCchhHHHHHHHHHHhhcCe-
Confidence 34455888999976 45688999999877765443 556 7888888887755443 33455
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++ .+|+++++++++++ |++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....+
T Consensus 131 --~v~~vd-----~~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~ 197 (398)
T PRK07504 131 --ESTLVD-----GLDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKP 197 (398)
T ss_pred --EEEEEC-----CCCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCc
Confidence 666664 26899999998765 89999999999999999999999999999999999999987654322
Q ss_pred cccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
... ++|+++.|+||+++++. ..|++++.++..+.... ..+... ++......
T Consensus 198 -~~~-------gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~---~~~~~~-----------------~g~~~s~~ 249 (398)
T PRK07504 198 -LEL-------GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHL---QDYFRH-----------------TGPSLSPF 249 (398)
T ss_pred -hhh-------CCCEEEeeccccccCCccceEEEEEeCcHHHHHHH---HHHHHH-----------------hCCCCCHH
Confidence 133 78999999999998753 45555555554433211 011100 12224556
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
.+|..++. .+.+..++++..+++..+.+.|++ +|++.
T Consensus 250 ~A~~~l~~--L~tl~~R~~~~~~na~~la~~L~~-~p~v~ 286 (398)
T PRK07504 250 NAWTLLKG--LETLPVRVRQQTESAAAIADFLAG-HPKVA 286 (398)
T ss_pred HHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHc-CCCcc
Confidence 77777654 566888999999999999999999 88875
No 199
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=1.9e-19 Score=177.01 Aligned_cols=235 Identities=15% Similarity=0.120 Sum_probs=161.4
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|...++| +.+++++|.+. .+++++|+.|+..++.+... ||+ .|+++...|......+
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~--al~~~sG~~Ai~~~l~al~~--------------~Gd-~Vv~~~~~y~~~~~~~ 117 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE--ALAFGSGMAAISATLIGFLK--------------AGD-HIICSNGLYGCTYGFL 117 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEcCCcHHHHHHHH
Confidence 345555555 45888889754 77888889888888776643 556 7888888887766655
Q ss_pred HHcCCC-CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 186 AVCGLG-TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 186 ~~~g~~-~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...+.. ..++..++. .|+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+
T Consensus 118 ~~~~~~~gi~~~~~~~-----~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a 186 (386)
T PRK06767 118 EVLEEKFMITHSFCDM-----ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFC 186 (386)
T ss_pred HHHHhhcCeEEEEeCC-----CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCc
Confidence 444211 114444443 3888999888764 8999999999999999999999999999999999999997
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
.+....+ ... ++|+++.|++|+++++.. .|+++.++ +.+..........+
T Consensus 187 ~~~~~~p-l~~-------g~Div~~S~sK~l~g~g~~~gG~v~~~~-~~i~~~~~~~~~~~------------------- 238 (386)
T PRK06767 187 SPYLQRP-LEL-------GCDAVVHSATKYIGGHGDVVAGVTICKT-RALAEKIRPMRKDI------------------- 238 (386)
T ss_pred ccccCCc-hhc-------CCcEEEecCcceecCCCCceeEEEEeCh-HHHHHHHHHHHHHh-------------------
Confidence 6543322 123 789999999999987644 46666544 33332210000000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----------ceeEEEEEe
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-----------EMVNVSFWY 404 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-----------~~~~v~f~~ 404 (480)
+.....+.+|+.++. .+.+..++++..+++.++.+.|++ +|+++.+.-| .+++++|..
T Consensus 239 -g~~~~~~~a~l~~~~--L~tl~~r~~~~~~~a~~la~~L~~-~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l 307 (386)
T PRK06767 239 -GGIMAPFDAWLLLRG--LKTLAVRMDRHCDNAEKIVSFLKN-HDAVEGVWYPEGELASRQMKRGGGVISFSI 307 (386)
T ss_pred -CCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHc-CCCccEEECCCcHHHHHhCCCCCceEEEEE
Confidence 001234456665554 345667888999999999999999 9999865433 346677754
No 200
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=2.1e-19 Score=176.60 Aligned_cols=211 Identities=15% Similarity=0.143 Sum_probs=152.9
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~ 191 (480)
++++.++++.|.+. .+++++|+.|+..++. +.. +|+ .|+++...|++.. ..+...|+
T Consensus 58 ~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~-~l~--------------~Gd-~Vlv~~~~y~~~~~~~~~~~~~~G~- 118 (390)
T PRK08064 58 ALEDIIAELEGGTK--GFAFASGMAAISTAFL-LLS--------------KGD-HVLISEDVYGGTYRMITEVLSRFGI- 118 (390)
T ss_pred HHHHHHHHHhCCCC--eEEECCHHHHHHHHHH-HhC--------------CCC-EEEEccCccchHHHHHHHHHHHcCC-
Confidence 34455889999874 5666778888876664 322 456 6778888887544 34445666
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....+
T Consensus 119 --~v~~v~~~-----d~~~l~~~l~~~------tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~ 185 (390)
T PRK08064 119 --EHTFVDMT-----NLEEVAQNIKPN------TKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKP 185 (390)
T ss_pred --EEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCc
Confidence 78888764 788898888765 89999999999999999999999999999999999999987654322
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
. .+ ++|+++.|+||+++++.+ .|+++++++++.........++ +....+
T Consensus 186 ~-~~-------g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~---------------------g~~~~~ 236 (390)
T PRK08064 186 L-DL-------GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSF---------------------GAVLGV 236 (390)
T ss_pred h-hh-------CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhc---------------------CCCCCH
Confidence 2 33 789999999999998766 4777777665544432111111 111234
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
..+|..++ |.+.+..+.++..+++..+.+.|++ +|.+.
T Consensus 237 ~~a~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~-~~~v~ 274 (390)
T PRK08064 237 QDCWLVLR--GLKTLHVRLEHSSETANKIALYLQE-HPKVQ 274 (390)
T ss_pred HHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhc-CCCcc
Confidence 45665443 4556778889999999999999998 77653
No 201
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=7.2e-19 Score=171.88 Aligned_cols=311 Identities=12% Similarity=0.022 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.+++.+++++++|.+. +++|+|||+|+..++.++.- .||+ +|+++..+|++...++...|.
T Consensus 33 ~~~~e~~la~~~g~~~--~v~~~sgt~aL~~~l~al~~-------------~pGd-~Viv~~~t~~~~~~~~~~~G~--- 93 (376)
T TIGR02379 33 SRRCETWLENRTGTKK--ALLTPSCTAALEMAALLLDI-------------QPGD-EVIMPSYTFVSTANAFVLRGA--- 93 (376)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHcCC-------------CCcC-EEEECCCCcHHHHHHHHHcCC---
Confidence 3445566888888864 99999999998888766511 1556 888999999999999998888
Q ss_pred CeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccc
Q psy12303 194 NCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 194 ~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~ 272 (480)
+++.++++++ +.+|+++++++++++ +++|+.+ +++|...|+++|.++|++||+++++|+||+.+......
T Consensus 94 ~~v~vd~d~~~~~~d~~~le~~i~~~------tk~Iip~---~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~ 164 (376)
T TIGR02379 94 KIVFVDIRPDTMNIDETLIESAITHR------TKAIVPV---HYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR 164 (376)
T ss_pred EEEEEecCCCcCCCCHHHHHHhcCcC------ceEEEEe---CCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence 8899999865 689999999998764 8888754 56899999999999999999999999999987542211
Q ss_pred ccCcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 273 YRHPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
. ... ..|+.++|+| |.+..+...|+++++++++...+......-.............+....+...-+..-+
T Consensus 165 -~---~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~ 238 (376)
T TIGR02379 165 -A---LGS--IGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSEL 238 (376)
T ss_pred -c---cCC--CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHH
Confidence 1 111 2355556655 5555433567788887766554332110000000000000000000011112222333
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--C-eEEecCC-cee----EEEEEeecCccCCCchhhHHHHhh
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD--K-FYLILEP-EMV----NVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~--g-~~~~~~~-~~~----~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
.+...+.+ .+.+++..++.+++++++.+.|.. ++ + +++...+ ... .+++.. +.. .+
T Consensus 239 ~Aa~g~~q--L~~l~~~~~~r~~~~~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~---~~--------- 302 (376)
T TIGR02379 239 QAAYLWAQ--LEQADRINQDRLATWQLYQDALKP-LEEKGIIELPSIPNGCQHNAHMFYIKL-KDE---DD--------- 302 (376)
T ss_pred HHHHHHHH--HHHhHHHHHHHHHHHHHHHHHhcc-CCcCCeeeCCCCCCCCeeeeEEEEEEE-CCc---CC---------
Confidence 33333333 567888889999999999999987 54 2 3332112 111 122221 111 00
Q ss_pred hhhHHHHHHHHhcccEEEe-ee-----e----e---CCc--------ccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 423 EITPILKGRMMQAGTMMVG-YQ-----P----L---NDL--------PNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~-~~-----~----~---~~~--------~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.+.|.++|+.... +. + . .+. ...+.+. +++..|++|++++++.|+++.
T Consensus 303 --r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP-~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 303 --RNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLP-LYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred --HHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEcc-CCCCCCHHHHHHHHHHHHHHh
Confidence 23566777777753210 00 0 0 000 2357777 789999999999999998864
No 202
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=3.9e-19 Score=173.75 Aligned_cols=287 Identities=10% Similarity=0.056 Sum_probs=192.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+++++++|+|+++++..++.+... ||+ .|+++.+.+..+...++..|. +
T Consensus 60 ~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~--------------~gd-~Vli~~p~y~~~~~~~~~~g~---~ 121 (352)
T PRK03321 60 VELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAG--------------PGD-EVIFAWRSFEAYPILVQVAGA---T 121 (352)
T ss_pred HHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcC--------------CCC-EEEeCCCCHHHHHHHHHHcCC---E
Confidence 3566678888898878899999999888777665432 556 788887887777777888887 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeecccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~~ 272 (480)
++.+|.++++.+|+++++++++++ +++|++++++||+|.+.|.++|.++|++ +++++++|++|+.+......
T Consensus 122 ~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~ 195 (352)
T PRK03321 122 PVQVPLTPDHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDV 195 (352)
T ss_pred EEEccCCCCCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCC
Confidence 889998877889999999988654 7899999999999999999999999997 59999999999876542111
Q ss_pred cc-CcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 273 YR-HPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 273 ~~-~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
.. ....... .--+++.|++|.++. +..+|+++. ++...+........+. ...+
T Consensus 196 ~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~-----------------------~s~~ 250 (352)
T PRK03321 196 PDGLELVRDH-PNVVVLRTFSKAYGLAGLRVGYAVG-HPEVIAALRKVAVPFS-----------------------VNSL 250 (352)
T ss_pred CcHHHHHhhC-CCEEEEecchHHhhhHHHhhhhhcC-CHHHHHHHHHhcCCCC-----------------------CCHH
Confidence 00 0011111 112455689999984 467899886 4555544332111110 1233
Q ss_pred HHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
...+++..+ ..+.+.+.+++..+..+.+.+.|.+ . ++.+ .++. +.+.+...+.. ..++.
T Consensus 251 ~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~-~-~~~~-~~~~-g~~i~i~l~~~----------------~~~~~ 310 (352)
T PRK03321 251 AQAAAIASLAAEDELLERVDAVVAERDRVRAALRA-A-GWTV-PPSQ-ANFVWLPLGER----------------TADFA 310 (352)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc-CCCC-CCEEEEeCCCC----------------HHHHH
Confidence 333333322 2344555666666667788899988 4 7765 2344 34333211110 23567
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.|.+.|+.+.. + + .+++|+++ .+.+++++++++|+++.+-
T Consensus 311 ~~l~~~gI~v~~---~-~-~~~iRi~~----~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 311 AAAAEAGVVVRP---F-A-GEGVRVTI----GAPEENDAFLRAARAWRAG 351 (352)
T ss_pred HHHHHCCEEEEc---c-C-CCcEEEee----CCHHHHHHHHHHHHHHhcc
Confidence 778788855433 2 3 35799994 4899999999999987654
No 203
>PLN02368 alanine transaminase
Probab=99.85 E-value=7.7e-19 Score=172.99 Aligned_cols=278 Identities=11% Similarity=-0.000 Sum_probs=190.6
Q ss_pred hHHhHHHHHHHHc--CcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhc
Q psy12303 85 VVSMAGEWLIATA--NTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEK 160 (480)
Q Consensus 85 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~ 160 (480)
++..+.+.+.... +.....|....+..++.+++.+++.+..|. +++++++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG-------- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC--------
Confidence 3444445544432 222345665566678888999999888784 5678999999999999888877521
Q ss_pred CCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccc
Q psy12303 161 GLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLG 238 (480)
Q Consensus 161 g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G 238 (480)
||+ .|+++.++|+.+...+...|. +++.+|+++ ++.+|+++|++++++...++.+++++++++|+||||
T Consensus 154 -----pGd-~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG 224 (407)
T PLN02368 154 -----EKD-GVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTG 224 (407)
T ss_pred -----CCC-EEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCC
Confidence 556 788999999999999999997 788898875 478999999999986544444589999999999999
Q ss_pred cccC---hHHHHHHHHHcCcEEEeeccccccccccc-cccC--cccCCC----C-C-CccceeCccccC-C-CcccceEE
Q psy12303 239 AFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK-KYRH--PRLTGI----E-R-ADSVTWNPHKLM-G-TLLQCSTI 304 (480)
Q Consensus 239 ~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~-~~~~--~~~~~~----~-~-~D~~~~s~hK~~-~-~p~~~g~~ 304 (480)
.+.+ +++|.++|++||+|+++|++|+...+... .... .....+ + . --+++.|++|.+ + .+..+|++
T Consensus 225 ~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~ 304 (407)
T PLN02368 225 QCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYF 304 (407)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEE
Confidence 9966 67788889999999999999988764221 1100 001111 1 1 124556899997 3 55789998
Q ss_pred EE--eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHH
Q psy12303 305 HF--KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG------------DEGFEKQIDR 370 (480)
Q Consensus 305 ~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g------------~~~~~~~~~~ 370 (480)
++ .++..+....... . ... + ...+..+++...+. .+...++.+.
T Consensus 305 i~~~~~~~li~~~~~~~-~-~~~-----------------~---~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~ 362 (407)
T PLN02368 305 EMTNIPPKTVEEIYKVA-S-IAL-----------------S---PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILES 362 (407)
T ss_pred EEeCCCHHHHHHHHHHh-c-ccC-----------------C---CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHH
Confidence 85 3445554433211 0 000 0 12233333333331 1122446778
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecCCceeEEEEE
Q psy12303 371 LMELAEYMVKKIKSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 371 ~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~ 403 (480)
..+.++.+.+.|++ ++|+.+ ..|+++.++|.
T Consensus 363 ~~~rr~~~~~~L~~-~~g~~~-~~P~Gafy~~~ 393 (407)
T PLN02368 363 LRRRARMMTDGFNS-CKNVVC-NFTEGAMYSFP 393 (407)
T ss_pred HHHHHHHHHHHHhC-CCCeEe-CCCCeeeEecc
Confidence 88899999999999 899987 47888888774
No 204
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.85 E-value=7.6e-18 Score=162.86 Aligned_cols=318 Identities=16% Similarity=0.152 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.|.+++..+ ....+|+++||+||..|++.||.. .|. ..+|-.....|.....++.+.|-
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~-------Tgr-----~~viaf~~afHG~T~galslT~~ 166 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAY-------TGR-----PGVIAFDGAFHGRTLGALSLTGS 166 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHH-------hCC-----CcEEEECCcccccchhhHHhccC
Confidence 44445666677776652 456999999999999999999986 232 22666677778888888777653
Q ss_pred C----------CCCeEEeeCCCCCC------------CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 191 G----------TDNCVEVPSDKRGR------------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 191 ~----------~~~v~~v~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ...+..+|....++ -..+.++..+......+..++++++...+...|.+.| ++
T Consensus 167 ~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~ 246 (447)
T COG0160 167 KPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLK 246 (447)
T ss_pred ccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHH
Confidence 1 12367777653221 1234466666666556677999999999999999866 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
++.++|++||+.+|+|++|.|+......+.+ ...|+ ..|++|+ .|.++++.+.|.++.+.. +.. .......+.
T Consensus 247 ~l~~~~~~~gillI~DEVQtG~GRTG~~fa~-E~~gv-~PDivt~--aK~ig~G~Pl~avv~r~e-i~~-~~~g~~~~T- 319 (447)
T COG0160 247 ALRKLCREHGILLIADEVQTGFGRTGKMFAF-EHFGV-EPDIVTL--AKSLGGGLPLSAVVGRAE-IMD-WPPGGHGGT- 319 (447)
T ss_pred HHHHHHHHcCCEEEEeccccCCCccccchhh-hhcCC-CCCEEEe--cccccCCCceeEEeccHH-hcc-cCCcccCCC-
Confidence 9999999999999999999999988777777 67777 7999994 599999899999987543 332 111111110
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce--eEEEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM--VNVSF 402 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~--~~v~f 402 (480)
-.|.+.++.+..++|+.+-.+ .+.++..++.+++.+.|.+....+.++++..+ .++-.
T Consensus 320 -----------------f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~gi 379 (447)
T COG0160 320 -----------------FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGV 379 (447)
T ss_pred -----------------CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEE
Confidence 123323444444555544333 56788888888888888762133445555443 23333
Q ss_pred EeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 403 WYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+..+.-....+ . ++..++..++.++|.++.+.+.. .+++|+. +....+++++|..++.|++.+++
T Consensus 380 E~v~d~~t~~p~----~---~~~~~i~~~~~~~Glil~~~G~~---~nviRi~-PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 380 ELVKDRDTKEPD----A---ELAAKIVARAFERGLLLLTCGPH---GNVLRIL-PPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred EEecCCCCCCCC----H---HHHHHHHHHHHHcCCEEeccCCC---CcEEEEe-CCcccCHHHHHHHHHHHHHHHHh
Confidence 333211000011 1 12467889999999876665332 4799999 99999999999999999988764
No 205
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=4.9e-19 Score=173.17 Aligned_cols=308 Identities=15% Similarity=0.088 Sum_probs=197.2
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
++...++|++ +++++|.+. ++.+++||.|+..++.++--. ||+ +|+++..++++...++.
T Consensus 24 g~~~~~fE~~----~a~~~g~~~--~~~~~sgt~Al~~al~~l~~~-------------~gd-eVi~p~~t~~~~~~ai~ 83 (363)
T PF01041_consen 24 GPYVEEFEKE----FAEYFGVKY--AVAVSSGTSALHLALRALGLG-------------PGD-EVIVPAYTFPATASAIL 83 (363)
T ss_dssp SHHHHHHHHH----HHHHHTSSE--EEEESSHHHHHHHHHHHTTGG-------------TTS-EEEEESSS-THHHHHHH
T ss_pred CHHHHHHHHH----HHHHhCCCe--EEEeCChhHHHHHHHHhcCCC-------------cCc-eEecCCCcchHHHHHHH
Confidence 5666677766 788888765 999999999999999875322 556 89999999999999999
Q ss_pred HcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 187 VCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.+|+ ++++++++ +++.+|++++++++++. +++|++++. .|...|+++|.++|+++|++++.|+||+.
T Consensus 84 ~~G~---~pv~~Di~~~~~~id~~~~~~~i~~~------t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~ 151 (363)
T PF01041_consen 84 WAGA---EPVFVDIDPETLNIDPEALEKAITPK------TKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAF 151 (363)
T ss_dssp HTT----EEEEE-BETTTSSB-HHHHHHHHHTT------EEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTT
T ss_pred Hhcc---EEEEEeccCCcCCcCHHHHHHHhccC------ccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEcccccc
Confidence 9999 88999998 57999999999999987 888887665 79899999999999999999999999999
Q ss_pred cccccccccCcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
|...-.. .-|. ..|+.++|+| |.+.+ ...|+++++++++...+......-.... .. ..+.... .+..
T Consensus 152 g~~~~g~-----~~G~-~gd~~~fSf~~~K~i~~-geGG~v~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~-~~g~ 220 (363)
T PF01041_consen 152 GARYKGR-----PVGS-FGDIAIFSFHPTKIITT-GEGGAVVTNDPELAERARALRNHGRSRD-AF--RRYRHEL-PPGY 220 (363)
T ss_dssp T-EETTE-----ETTS-SSSEEEEESSTTSSS-S-SS-EEEEESTHHHHHHHHHHTBTTEETS-EC--STTEESS-SS--
T ss_pred CceeCCE-----eccC-CCCceEecCCCCCCCcC-CCCeeEEecHHHHHHHhhhhhccCcCcc-cc--ccccccc-cCCc
Confidence 8754322 1121 3477666664 88854 4458888888776554432111111000 00 0000000 0111
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE------EEEEeecCccCCCchhhH
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN------VSFWYLPTRVRNMPHEKR 417 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~------v~f~~~~~~~~~~~~~~~ 417 (480)
.-+...+.+...+.+ .+.+++.+++.+++++++.+.|.. .+++.....+.... +.+++.+... .+
T Consensus 221 n~rm~~~~AAigl~Q--L~~L~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~--~~---- 291 (363)
T PF01041_consen 221 NFRMSELQAAIGLAQ--LKRLDEIIARRRENAQRYREALAG-IPGIKPPPIPDGAERSSYYRFPIRLPDEAL--AD---- 291 (363)
T ss_dssp B-B-BHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHTT-GTTEEEEGCGTTTEEBCESSEEEEETCCGC--ST----
T ss_pred ccccHHHHHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHhc-CCCccccccccccccccccccccccccccc--ch----
Confidence 222344444444444 567899999999999999999999 89987765433221 2222211110 00
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEeee--ee-------------CCc--------ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVGYQ--PL-------------NDL--------PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~~~--~~-------------~~~--------~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..++.+.|.+.|+-..... +. .+. ...+.+. +++..+++|+++++++|+
T Consensus 292 -------rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP-~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 292 -------RDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLP-IHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp -------HHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEE-HSTTSCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECc-CCCCCCHHHHHHHhhccC
Confidence 2467788888885422211 00 000 2457777 889999999999999885
No 206
>PLN02672 methionine S-methyltransferase
Probab=99.85 E-value=1.6e-18 Score=183.87 Aligned_cols=319 Identities=12% Similarity=0.114 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhCCCCC---CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGG---DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~---~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
.++.+.+++|+++..|++.. ++++++|+++++..++.+..+ ||+ .|+++.++|+.+..+++.
T Consensus 733 pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~--------------pGD-~VLVp~PtY~~Y~~~a~~ 797 (1082)
T PLN02672 733 TDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQ--------------EGG-TLCFPAGSNGTYVSAAKF 797 (1082)
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcC--------------CCC-EEEEeCCChHHHHHHHHH
Confidence 45568899999999998653 688888888888777777654 556 888999999999999999
Q ss_pred cCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCC-CccccccC---hHHHHHHHHHcCcEEEeec
Q psy12303 188 CGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGT-TVLGAFDP---IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~~---l~~I~~i~~~~~~~l~vD~ 261 (480)
.|. +++.+|+++ ++.+|.++|++++++. ...+|++++|+ ||||.+.+ +++|.++|++||++|++|+
T Consensus 798 ~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDE 869 (1082)
T PLN02672 798 LKA---NFRRIPTKSSDGFKLTAKTLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDT 869 (1082)
T ss_pred cCC---EEEEEecccccCCCCCHHHHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 998 889999863 5789999999998642 13478888887 99999965 7888888999999999999
Q ss_pred cccccccccccc-cC---cccCCCCC-----CccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 262 AWGGGLLLSKKY-RH---PRLTGIER-----ADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 262 a~~~~~~~~~~~-~~---~~~~~~~~-----~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+|+...+..+.. .. +....... .-+++.|++|.++.| ..+|+++..++.+....... ..+....
T Consensus 870 aYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~-~~~s~~~----- 943 (1082)
T PLN02672 870 SFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSA-PGLSRPH----- 943 (1082)
T ss_pred CCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHh-hhhcCCC-----
Confidence 998655422110 00 01111111 113455888665554 78999987665455443321 0100000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHh----c--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAK----G--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~----g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
.....++...+..+ + .+.+.+..+...+.++++.+.|++ . |+.+ .+|+.+.++|...
T Consensus 944 --------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~-~-Gi~v-~~PeGGFfLwl~l 1006 (1082)
T PLN02672 944 --------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA-C-GWDV-LEPQGGISMVAKP 1006 (1082)
T ss_pred --------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeE-ecCCcEEEEEEEc
Confidence 01111222222211 1 234566677788899999999999 4 8876 4677777766432
Q ss_pred cCccC---CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 406 PTRVR---NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 406 ~~~~~---~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.... ..+..+....+..-..++.+.|.++..+++.++.+.+..+++|+++. .+++++++.+++|+++.+
T Consensus 1007 ~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1007 SAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 21100 00000000000001246778887764455555555454689999944 478899999999988653
No 207
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=9.8e-19 Score=170.37 Aligned_cols=218 Identities=12% Similarity=0.161 Sum_probs=157.7
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH-
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA- 185 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~- 185 (480)
.|....+| +.++++.|.. ++++++||++|+..++.+..+ ||+ +|+++...|..+...+
T Consensus 60 npt~~~Le----~~iA~le~~~--~~~~~~sG~~Ai~~~l~all~--------------~GD-~Vvv~~~~Y~~t~~l~~ 118 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGA--GTALYPSGAAAISNALLSFLK--------------AGD-HLLMVDSCYEPTRDLCD 118 (394)
T ss_pred CchHHHHH----HHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEECCCcHHHHHHHH
Confidence 45444555 4477776664 489999999999998887654 556 6777777786666543
Q ss_pred ---HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 186 ---AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 186 ---~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
...|+ ++.+++.+ +.+.++++++++ |++|++++++|++|.+.|+++|+++|+++|++++||++
T Consensus 119 ~~l~~~Gi---~v~~v~~~-----~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t 184 (394)
T PRK09028 119 KILKGFGI---ETTYYDPM-----IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT 184 (394)
T ss_pred Hhhhhcce---EEEEECCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 23444 66666543 567788888665 89999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
|+.+.. .....+ ++|+++.|.|||++++.. .|++ +.++......... ..
T Consensus 185 ~a~p~~-~~Pl~~-------GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l~~~--~~------------------ 235 (394)
T PRK09028 185 WASPIN-SRPFEM-------GVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQLREH--SY------------------ 235 (394)
T ss_pred cccccc-CCcccc-------CceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHHHHHH--HH------------------
Confidence 998753 333355 899999999999998743 3444 4555433322100 00
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..|.......+|+.++. .+.+.-+++++.+++..+.+.|++ +|.++-+
T Consensus 236 -~~G~~~~p~~a~l~~rg--l~TL~lR~~~~~~na~~la~~L~~-~p~v~~V 283 (394)
T PRK09028 236 -LMGQCTSPDDVYLAMRG--LRTLGVRLAQHEKNALKVANWLAT-RPEVDHV 283 (394)
T ss_pred -hcCCCCCHHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHhc-CCCccEE
Confidence 01222456677876654 667888999999999999999999 8887543
No 208
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.85 E-value=1.7e-18 Score=172.46 Aligned_cols=312 Identities=13% Similarity=0.074 Sum_probs=191.2
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
..|...++..++.+.+++++.+..| ++++++++|+|+++++...+ .+.. ||+ .|++..++|+
T Consensus 70 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~~--------------~gd-~V~v~~P~Y~ 133 (409)
T PRK07590 70 RGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIFG--------------PDN-TIAVTDPVYP 133 (409)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-HhcC--------------CCC-EEEEeCCCCc
Confidence 4565566777788888888766655 46789999999999877643 2222 556 7888999999
Q ss_pred hHHHHHHHcCCCCC--------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHH
Q psy12303 180 SVRSCAAVCGLGTD--------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIAD 248 (480)
Q Consensus 180 s~~~~~~~~g~~~~--------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~ 248 (480)
.+...++..|.... +++.+|.+.++.+.++ +.+ + .+++|++++|+||||.+.+ +++|.+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~~---~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~ 203 (409)
T PRK07590 134 VYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-LPE---E------KVDIIYLCFPNNPTGTVLTKEQLKAWVD 203 (409)
T ss_pred chHHHHHHcCCcccccccccccceeEeecccccCCccc-Ccc---c------CceEEEEeCCCCCcCCcCCHHHHHHHHH
Confidence 99999999987210 2788888743322222 111 1 3889999999999999976 577888
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCC---CccceeCccccCC-CcccceEEEEeCchhhHhhhcCC-----
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER---ADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMS----- 319 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~---~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~----- 319 (480)
+|++||++|++|++|+......... . .+..++. .-+++.|++|.++ .+..+|+++.. +..+.......
T Consensus 204 ~a~~~~~~iI~De~Y~~~~~~~~~~-~-~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li~~~~~~~~~~~~ 280 (409)
T PRK07590 204 YAKENGSLILFDAAYEAFISDPSLP-H-SIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELKGKTSDGEGVSLN 280 (409)
T ss_pred HHHHcCeEEEEEccchhhccCCCCC-c-chhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHhhhccccchhhhH
Confidence 8999999999999998754321110 1 1222212 2245679999996 55789998864 34433110000
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
..+...... .. .....+...++...+ +...+++..++..+.++.+.+.|++ . ++++. +|.
T Consensus 281 ~~~~~~~~~-----------~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~-~~~ 343 (409)
T PRK07590 281 SLWNRRQST-----------KF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES-A-GFEVY-GGV 343 (409)
T ss_pred HHHHHHHhh-----------cc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcee-cCC
Confidence 000000000 00 001222233332222 3456677778888889999999999 4 77764 555
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.+.+.|...+.... ..++...+.+ .|+++.....+.. ..+++|+++ ..++++++..++.|.
T Consensus 344 g~~f~wi~~~~~~~--------------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~---~~~~~~l~~~l~rl~ 406 (409)
T PRK07590 344 NAPYIWVKTPDGMS--------------SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSA---FGSRENVLEAMERIK 406 (409)
T ss_pred cceEEEEECCCCCC--------------HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEc---cCCHHHHHHHHHHHH
Confidence 56555543332211 1345566665 4544333222211 146999993 347899999999987
Q ss_pred Hh
Q psy12303 475 RL 476 (480)
Q Consensus 475 ~~ 476 (480)
++
T Consensus 407 ~~ 408 (409)
T PRK07590 407 KA 408 (409)
T ss_pred hh
Confidence 65
No 209
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.84 E-value=2e-18 Score=171.15 Aligned_cols=297 Identities=13% Similarity=0.095 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+.++++.+.+ .++|+++||+|+..|++++|.... ..+|.. +| +.+|......|.+...++...+.
T Consensus 82 ~~~~~l~~~l~~~~~~~--~~~~~~SGseA~e~Alk~a~~~~~---~~~g~~--~~r~~ii~~~~~~HG~~~~~~~~~~~ 154 (396)
T PRK04073 82 DQLGPWYEKVAKLTGKD--MVLPMNTGAEAVETAIKAARRWAY---DVKGVE--PNKAEIIACEGNFHGRTMAAVSLSSE 154 (396)
T ss_pred HHHHHHHHHHHhcCCCC--eEEEcCChHHHHHHHHHHHHHHhh---hccCCC--CCCCEEEEECCCcCCCCHHHHhhcCC
Confidence 34455667777777653 699999999999999999986310 111211 12 33555556678777666665542
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
.. ..+..+|.+ |++++++++++. +++|+++.+++++|.+.| +++|.++|++||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 223 (396)
T PRK04073 155 EEYKRGFGPMLPGIKKIPYG-----DLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLF 223 (396)
T ss_pred cccccCCCCCCCCceEeCCC-----CHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 10 112334433 788998888654 899999999999999865 899999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
++|++|.+.......+.. ...++ .+|++++ .|.++++ .++|+++.+ ++..+...... . .
T Consensus 224 i~DEv~~g~g~~g~~~~~-~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~-~~i~~~~~~~~-----~----------~ 283 (396)
T PRK04073 224 IADEIQTGLGRTGKLFAC-DWDNV-TPDMYIL--GKALGGGVFPISCVAAN-RDILGVFTPGS-----H----------G 283 (396)
T ss_pred EEecchhCCCcCcHHHHh-hhcCC-CCCEEEe--cccccCCCCcceEEEEc-HHHHhhhcCCC-----C----------C
Confidence 999999975432211111 12233 5787774 6998876 678888764 44443321100 0 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP--DKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~--~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
.++ ++.+....++.++|+.+.. ....++..++.++|.+.|++ + +.+..+ ++....+.+.+ +..
T Consensus 284 ~t~---~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~-l~~~~i~~~-~~~g~~~~~~~-~~~------ 348 (396)
T PRK04073 284 STF---GGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKE-IDNPMIKEV-RGRGLFIGVEL-NEP------ 348 (396)
T ss_pred CCC---CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHh-hcCCcccce-ecceEEEEEEe-cch------
Confidence 000 1111122222333433222 23457777889999999987 4 222221 23333333322 110
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.++|.++|.++ .+ .+ .+++|++ ++...|++||++++++|++++
T Consensus 349 ----------~~~~~~~l~~~Gv~~-~~---~~-~~~iRi~-p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 349 ----------ARPYCEALKEEGLLC-KE---TH-ETVIRFA-PPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ----------HHHHHHHHHHCCeEE-ec---CC-CCEEEEE-CCcccCHHHHHHHHHHHHHHh
Confidence 235667788888554 32 12 4699999 888999999999999998864
No 210
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.3e-18 Score=171.70 Aligned_cols=221 Identities=13% Similarity=0.109 Sum_probs=159.0
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH-
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC- 184 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~- 184 (480)
..|...++|+. ++++.|.+ .+++++||+.|+..++.+... ||+ .|+++...|.+....
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~--~~l~~~sG~~Ai~~al~~ll~--------------~Gd-~Vl~~~~~y~~~~~~~ 120 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGE--AAVVAASGMGAISSSLWSALK--------------AGD-HVVASDTLYGCTFALL 120 (400)
T ss_pred CCccHHHHHHH----HHHHhCCC--cEEEEcCHHHHHHHHHHHHhC--------------CCC-EEEEecCccchHHHHH
Confidence 45666666655 77888875 479999999999888876643 556 777887777664433
Q ss_pred ---HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEe
Q psy12303 185 ---AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHV 259 (480)
Q Consensus 185 ---~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~v 259 (480)
+...|+ ++++++.+ |+++++++++++ +++|++++++||+|.+.|+++|.++|+++ |+++++
T Consensus 121 ~~~~~~~G~---~v~~vd~~-----d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~liv 186 (400)
T PRK06234 121 NHGLTRYGV---EVTFVDTS-----NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFV 186 (400)
T ss_pred HHHHhhCCe---EEEEECCC-----CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEE
Confidence 455666 77777754 899999999765 89999999999999999999999999997 999999
Q ss_pred eccccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 260 DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 260 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
|++|+.+....+ ... ++|+++.|++|+++++.. .|+++. +++...........+.
T Consensus 187 Dea~~~~~~~~~-l~~-------g~Divv~S~sK~l~g~g~~~gG~v~~-~~~~~~~l~~~~~~~~-------------- 243 (400)
T PRK06234 187 DNTFCTPYIQRP-LQL-------GADVVVHSATKYLNGHGDVIAGFVVG-KEEFINQVKLFGIKDM-------------- 243 (400)
T ss_pred ECCCCchhcCCc-hhh-------CCcEEEeeccccccCCCCceeEEEEe-cHHHHHHHHHHHHHHh--------------
Confidence 999987754322 122 789999999999987542 466664 4444433221100000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+.......+|..++. .+.+..++++..+++.++.+.|++ +|.+.-+
T Consensus 244 -----~g~~l~p~~a~l~~~~--l~tl~~r~~~~~~na~~~a~~L~~-~~~V~~V 290 (400)
T PRK06234 244 -----TGSVIGPFEAFLIIRG--MKTLQIRMEKHCKNAMKVAKFLES-HPAVEKV 290 (400)
T ss_pred -----cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHc-CCCeeEE
Confidence 1112345566666654 556678888999999999999999 7877543
No 211
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.3e-18 Score=170.40 Aligned_cols=217 Identities=15% Similarity=0.125 Sum_probs=158.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH-HcCCCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA-VCGLGTDN 194 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~-~~g~~~~~ 194 (480)
++.+.++++.|.+ .+++++||++|+..++.+... ||+ .|+++...|++....+. ..+.+..+
T Consensus 56 ~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~~--------------~GD-~Vl~~~~~y~~~~~~~~~~~~~~gi~ 118 (386)
T PRK08045 56 VVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFLK--------------PGD-LLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHcC--------------CCC-EEEEcCCCcHHHHHHHHHHHhhCCeE
Confidence 3455688888864 499999999999988876643 556 78888888886554443 33222225
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+..++ ..|+++++++++++ +++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+....+ ..
T Consensus 119 v~~vd-----~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~p-l~ 186 (386)
T PRK08045 119 VLFVD-----QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNP-LA 186 (386)
T ss_pred EEEeC-----CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCc-hh
Confidence 55553 25899999988764 89999999999999999999999999999999999999987754322 23
Q ss_pred CcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. ++|+++.|++||++++.+ .|+++++++++....... ..++ +-....+..
T Consensus 187 ~-------gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-~~~~--------------------g~~~~p~~~ 238 (386)
T PRK08045 187 L-------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-ANNI--------------------GVTGGAFDS 238 (386)
T ss_pred h-------CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH-HHhc--------------------CCCCCHHHH
Confidence 3 789999999999997765 576666666544332100 0011 111355677
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
|+.++. .+.+..+++++.+++..+.+.|++ +|.++-+
T Consensus 239 ~l~~rg--l~tl~~R~~~~~~na~~la~~L~~-~p~v~~V 275 (386)
T PRK08045 239 YLLLRG--LRTLVPRMELAQRNAQAIVKYLQT-QPLVKKL 275 (386)
T ss_pred HHHHhh--hccHHHHHHHHHHHHHHHHHHHHc-CCCEeEE
Confidence 777765 456888999999999999999999 8888644
No 212
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=7.6e-19 Score=169.79 Aligned_cols=275 Identities=12% Similarity=0.053 Sum_probs=182.6
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.++.++++|+|+++++..+..+ .. + + .|++..++|.++...+...|+ +
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~--------------~-g-~vl~~~p~y~~~~~~~~~~g~---~ 109 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LA--------------P-G-RVLVLAPTYSEYARAWRAAGH---E 109 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hC--------------C-C-eEEEeCCCcHHHHHHHHHcCC---E
Confidence 5677889999999878899999999988775433 22 3 3 477778899999999998887 7
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++.++ |++++++++++ +++|++++|+||+|.+.+ +++|+++|+++|+++++|++|..+....+
T Consensus 110 ~~~~~-------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 175 (330)
T TIGR01140 110 VVELP-------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDAS 175 (330)
T ss_pred EEEeC-------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccc
Confidence 77776 78889888732 568899999999999988 66677888999999999999986653211
Q ss_pred cccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
. . ...+..+.++++.|++|+++.| .++|+++.++ +.+.........+. ...+
T Consensus 176 ~-~--~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~~-----------------------~s~~ 228 (330)
T TIGR01140 176 L-A--PQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP-ALLARLREALGPWT-----------------------VNGP 228 (330)
T ss_pred h-h--hHhccCCCEEEEEecchhhcCchhhhhheeCCH-HHHHHHHhcCCCCC-----------------------chHH
Confidence 1 0 0111114467888999999844 6789988754 44444332211110 1222
Q ss_pred HHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
...++...+.. +..+...++..++.+++.+.|++ ++.+++. |..+.+.+.-.+ . ..++.
T Consensus 229 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~~~~~f~~~~~~-~----------------~~~l~ 288 (330)
T TIGR01140 229 ARAAGRAALADTAWQAATRARLAAERARLAALLAR-LGGLEVV--GGTALFLLVRTP-D----------------AAALH 288 (330)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh-CCCceEC--CCCCeEEEEEcC-C----------------HHHHH
Confidence 33333333322 33466678888899999999999 7667653 334444332111 0 13567
Q ss_pred HHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 430 GRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
+.|.+.|+++.....+.+ ..+++|+++. +..++ ++++++|+
T Consensus 289 ~~l~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 289 EALARRGILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEALA 330 (330)
T ss_pred HHHHHCCEEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhhC
Confidence 888888855554333322 1479999943 23355 88887763
No 213
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=9e-19 Score=173.59 Aligned_cols=216 Identities=14% Similarity=0.095 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHc
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVC 188 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~ 188 (480)
..+++.++++++.|.+. +++++||+.|+..++ .+.. ||+ .|+++...|.+....+ ...
T Consensus 134 t~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~ll~--------------~GD-~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 134 TRDALESLLAKLDKADR--AFCFTSGMAALSAVT-HLIK--------------NGE-EIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred HHHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HHhC--------------CCC-EEEEcCCchhhHHHHHHHHHHHC
Confidence 34566777888888654 677788887764433 3322 556 7888888988876444 345
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|+ +++.++.. |+++++++++++ +++|++++++|++|.+.|+++|+++|++||+++++|++|+.+..
T Consensus 196 G~---~v~~vd~~-----d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~ 261 (464)
T PLN02509 196 GV---VVKRVNTT-----NLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL 261 (464)
T ss_pred Ce---EEEEeCCC-----CHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc
Confidence 65 66776543 788999888654 89999999999999999999999999999999999999987765
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
..+ ... ++|++++|++||++++.+ .|++++++......... +... .+..
T Consensus 262 ~~p-l~~-------gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~~~----------------~g~~ 312 (464)
T PLN02509 262 SRP-LEL-------GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQNS----------------EGSG 312 (464)
T ss_pred CCh-hhc-------CCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HHHh----------------cCCC
Confidence 322 223 789999999999998765 67777666543322110 0000 0111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.....+|+.++. .+.+..++++..+++.++.+.|++ +|.++-+
T Consensus 313 l~p~~A~l~lr~--L~tL~~R~~r~~~nA~~la~~L~~-~p~V~~V 355 (464)
T PLN02509 313 LAPFDCWLCLRG--IKTMALRIEKQQENARKIAMYLSS-HPRVKKV 355 (464)
T ss_pred cCHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHhc-CCCccEE
Confidence 345567766655 677888999999999999999999 8988533
No 214
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.8e-18 Score=170.29 Aligned_cols=214 Identities=13% Similarity=0.110 Sum_probs=155.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g~~ 191 (480)
++.+.++++.|.+. .+++++|++|+..++.+... ||+ .|+++...|...... +...|.
T Consensus 64 ~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~all~--------------pGD-~Vvv~~p~Y~~t~~~~~~~~~~~g~- 125 (405)
T PRK08776 64 LLGEALAELEGGAG--GVITATGMGAINLVLNALLQ--------------PGD-TLVVPHDAYGGSWRLFNALAKKGHF- 125 (405)
T ss_pred HHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHHhC--------------CCC-EEEEccCCchHHHHHHHHHHHhcCc-
Confidence 45566888888753 57788889999888877643 556 677777787764332 333344
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++. .|+++|+++++++ |++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+....+
T Consensus 126 --~v~~v~~-----~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~p 192 (405)
T PRK08776 126 --ALITADL-----TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKP 192 (405)
T ss_pred --EEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 6666654 3889999888654 89999999999999999999999999999999999999986543221
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
..+ ++|+++.|++|+++++.+ .|+++++++++.+...... .. ++-....
T Consensus 193 -l~~-------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~-~~--------------------~g~~~s~ 243 (405)
T PRK08776 193 -LEF-------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWA-NA--------------------LGLTGSP 243 (405)
T ss_pred -ccc-------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHH-Hh--------------------cCCCCCH
Confidence 123 789999999999997754 5777666665544322100 00 1111345
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
+.+|+.++ |.+.++.++++..+++..+.+.|++ +|.+.-+
T Consensus 244 ~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~-~p~v~~V 283 (405)
T PRK08776 244 FDAFLTLR--GLRTLDARLRVHQENADAIAALLDG-HAAVNQV 283 (405)
T ss_pred HHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHc-CCCeeEE
Confidence 67776664 4677889999999999999999999 8887543
No 215
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.6e-19 Score=175.88 Aligned_cols=217 Identities=13% Similarity=0.113 Sum_probs=160.9
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g~~ 191 (480)
++.+.++++.|.+ .+++++||++|+..++.+... ||+ .|+++...|.+... .+..+|+
T Consensus 69 ~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al~~--------------~GD-~Vl~~~~~y~~~~~~~~~~~~~~Gi- 130 (394)
T PRK07050 69 ALAQRLAEIEGGR--HALLQPSGLAAISLVYFGLVK--------------AGD-DVLIPDNAYGPNRDHGEWLARDFGI- 130 (394)
T ss_pred HHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHHhC--------------CCC-EEEEecCCcccHHHHHHHHHHhcCe-
Confidence 4455588888875 499999999999999988754 556 78888888887654 4455566
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++++++.. +.++++++++++ |++|++++++|++|.+.++++|.++|+++|+++++|++|+.+...-+
T Consensus 131 --~v~~vd~~-----~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~ 197 (394)
T PRK07050 131 --TVRFYDPL-----IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKP 197 (394)
T ss_pred --EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCH
Confidence 67777643 456788887654 89999999999999999999999999999999999999988765322
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
... ++|+++.|++|++++..+ .|+++++++++.+...... .+ .|-...+
T Consensus 198 -l~~-------GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~-~~--------------------~G~~~~~ 248 (394)
T PRK07050 198 -FEH-------GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR-MR--------------------LGIGVSA 248 (394)
T ss_pred -HHc-------CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH-Hh--------------------cCCCCCH
Confidence 233 789999999999986554 5667777766544332110 00 1111345
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
...|..++. .+.+..++++..+++..+.+.|++ +|++..+..|
T Consensus 249 ~~a~l~lr~--l~tl~~Rl~~~~~~a~~la~~L~~-~p~v~~v~~p 291 (394)
T PRK07050 249 DDCSLVLRG--LPSLQVRLAAHDRSALEVAEWLKA-RPEIATVLHP 291 (394)
T ss_pred HHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECC
Confidence 566766653 456777889999999999999999 8887755444
No 216
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.2e-18 Score=170.65 Aligned_cols=221 Identities=15% Similarity=0.066 Sum_probs=159.5
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|...++|+. +++++|.+. +++++||+.|+..++.+... ||+ .|+++...|.+....+
T Consensus 51 ~np~~~~lE~~----lA~l~g~~~--~l~~~sG~~Ai~~~l~~ll~--------------~GD-~Vlv~~~~y~~~~~~~ 109 (385)
T PRK08574 51 ENPTLRPLEEA----LAKLEGGVD--ALAFNSGMAAISTLFFSLLK--------------AGD-RVVLPMEAYGTTLRLL 109 (385)
T ss_pred CCccHHHHHHH----HHHHhCCCc--EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCchhHHHHH
Confidence 34555555555 888888754 78889999999998877643 556 7888889999887776
Q ss_pred HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHH-HHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 186 AVCGLGTDNCVEVPSDKRGRLIPSELERLVLE-RKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 186 ~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~-~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+.+.....++..+. .|++++++++++ + +++|++++++||+|.+.|+++|.++|+++|+++++|++|+
T Consensus 110 ~~~~~~g~~v~~~~------~d~~~l~~~i~~~~------tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a 177 (385)
T PRK08574 110 KSLEKFGVKVVLAY------PSTEDIIEAIKEGR------TKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFA 177 (385)
T ss_pred HHhhccCcEEEEEC------CCHHHHHHhcCccC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCC
Confidence 54421111555543 367889888875 3 8899999999999999999999999999999999999998
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
.+....+. .. ++|+++.|++|++++|.. .|++++++++.......... +
T Consensus 178 ~~~~~~~l-~~-------GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~-~-------------------- 228 (385)
T PRK08574 178 TPLLYRPL-RH-------GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR-R-------------------- 228 (385)
T ss_pred ccccCChh-hh-------CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH-h--------------------
Confidence 76542221 23 789999999999997654 35566666655443221100 0
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
.|.......+|..++. .+.+..++++..+++.++.+.|++ +|.++-
T Consensus 229 ~g~~~~p~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~-~p~v~~ 274 (385)
T PRK08574 229 LGTIMQPFEAYLVLRG--LKTLEVRFERQCRNAMAIAEFLSE-HPKVAE 274 (385)
T ss_pred cCCCCCHHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHc-CCCcCE
Confidence 1111234456666554 566788899999999999999999 888753
No 217
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.3e-18 Score=169.25 Aligned_cols=220 Identities=14% Similarity=0.108 Sum_probs=159.3
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+| +.++++.|.+. .+++++|++|+..++.+... ||+ .|+++...|.+....+
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~--~i~~ssG~~Ai~~~l~all~--------------~GD-~Vi~~~~~y~~~~~~~ 120 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA--ATAFSTGMAAISNTLYTFLK--------------PGD-RVVSIKDTYGGTNKIF 120 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe--EEEeCChHHHHHHHHHHhcC--------------CCC-EEEEcCCchHHHHHHH
Confidence 344444444 55888889764 68888889999888876643 556 7888888988765433
Q ss_pred ----HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 186 ----AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 186 ----~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
...|+ ++.+++. .|+++++++++++ |++|++++++|++|.+.|+++|.++|+++|+++++|+
T Consensus 121 ~~~~~~~Gi---~v~~vd~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~ 186 (398)
T PRK08249 121 TEFLPRMGV---DVTLCET-----GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDN 186 (398)
T ss_pred HHHHhhCCe---EEEEcCC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEEC
Confidence 34455 6666553 4899999998764 8999999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
+|+.+....+ ... ++|+++.|++|+++++. ..|++++.++++......... .
T Consensus 187 t~a~~~~~~~-l~~-------~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~--~----------------- 239 (398)
T PRK08249 187 TFATPINQNP-LAL-------GADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE--I----------------- 239 (398)
T ss_pred CcCccccCCc-hhh-------CCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH--h-----------------
Confidence 9986543221 123 78999999999998654 244555566655443321110 0
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+.......+|+.++. .+.+..++++..+++..+.+.|++ +|.++-+
T Consensus 240 --~g~~~s~~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~-~p~v~~V 286 (398)
T PRK08249 240 --NGATMDPMSAYLILRG--MKTLKLRVRQQQESAMALAKYLQT-HPKVEAV 286 (398)
T ss_pred --cCCCCCHHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHHc-CCCeeEE
Confidence 1112345566766654 667788889999999999999999 8887644
No 218
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=3e-19 Score=176.75 Aligned_cols=235 Identities=14% Similarity=0.111 Sum_probs=162.4
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH----cCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV----CGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~----~g~~ 191 (480)
++++.++++.|... .++|+|||+|+..++.+... +|+ +|+++...|.+....+.. .|+
T Consensus 68 ~le~~lA~l~g~~~--av~~sSGt~Al~~al~~ll~--------------~Gd-~Vi~~~~~y~~t~~~~~~~l~~~Gi- 129 (433)
T PRK08134 68 VLEERVAALEGGVG--AIATASGQAALHLAIATLMG--------------AGS-HIVASSALYGGSHNLLHYTLRRFGI- 129 (433)
T ss_pred HHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEeCCccHHHHHHHHHHHhhCCe-
Confidence 34455888899875 79999999999999877632 456 788888888876555433 565
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++++++.+ |+++++++|+++ |++|++++++|++|.+.|+++|.++|+++|+++++|++++.+....+
T Consensus 130 --~v~~vd~~-----d~~~l~~~i~~~------TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~p 196 (433)
T PRK08134 130 --ETTFVKPG-----DIDGWRAAIRPN------TRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRP 196 (433)
T ss_pred --EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 78888765 899999999876 89999999999999999999999999999999999999988876443
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhhHh----hhcCCcccccccccccCcccCCC--------C
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLLIS----CNQMSAEYLFMQDKLYDVRYDTG--------D 338 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~--------~ 338 (480)
. .+ ++|+++.|.|||++++.. .|.+++......-. .....++................ .
T Consensus 197 l-~~-------GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 268 (433)
T PRK08134 197 F-EH-------GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARRE 268 (433)
T ss_pred h-hc-------CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHH
Confidence 3 45 899999999999986542 56665543221100 00000110000000000000000 0
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.....+.......+|..++ |.+.+..++++..+++..+.+.|++ +|.+.-+
T Consensus 269 ~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~-~p~V~~V 319 (433)
T PRK08134 269 GLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLAS-HPAVARV 319 (433)
T ss_pred HHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 0011233345666776654 4677899999999999999999999 8887543
No 219
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.2e-18 Score=169.32 Aligned_cols=217 Identities=13% Similarity=0.083 Sum_probs=156.3
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH-cCCCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-CGLGTDN 194 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-~g~~~~~ 194 (480)
++++.++++.|.+. .+.+++|++|+..++.+..+ ||+ .|+++...|.+....+.. +..-..+
T Consensus 65 ~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~all~--------------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~gi~ 127 (388)
T PRK07811 65 ALEEQLAALEGGAY--GRAFSSGMAATDCLLRAVLR--------------PGD-HIVIPNDAYGGTFRLIDKVFTRWGVE 127 (388)
T ss_pred HHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCchHHHHHHHHhCcCCCeE
Confidence 34455888888875 56667889999999987754 556 788888888865554433 2211115
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+..++. .|+++|+++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....+ ..
T Consensus 128 ~~~~d~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p-~~ 195 (388)
T PRK07811 128 YTPVDL-----SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQP-LA 195 (388)
T ss_pred EEEeCC-----CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCc-hh
Confidence 556554 3899999998765 89999999999999999999999999999999999999987654322 12
Q ss_pred CcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. ++|+++.|++|++++|.+ .|+++++++.+........ .+ .+.......+
T Consensus 196 ~-------gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~-~~--------------------~g~~~s~~~a 247 (388)
T PRK07811 196 L-------GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQ-NG--------------------AGAVPGPFDA 247 (388)
T ss_pred h-------CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHH-Hh--------------------cCCCCCHHHH
Confidence 3 789999999999997654 5777777665443321100 00 0111234456
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
|..++. .+.+..++++..+++..+.+.|++ +|+++-+
T Consensus 248 ~l~~~~--L~tl~~R~~~~~~na~~la~~L~~-~p~v~~V 284 (388)
T PRK07811 248 YLTLRG--LKTLAVRMDRHSENAEAVAEFLAG-HPEVSTV 284 (388)
T ss_pred HHHHhc--cCcHHHHHHHHHHHHHHHHHHHHh-CCCeeEE
Confidence 666554 455778888999999999999999 8988644
No 220
>PRK05839 hypothetical protein; Provisional
Probab=99.83 E-value=6.8e-18 Score=165.97 Aligned_cols=312 Identities=11% Similarity=-0.025 Sum_probs=192.0
Q ss_pred hHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 88 MAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+.+...... ...|....+..++.+.+++++++..| .+++++++|+|+++++..++.+.... .
T Consensus 41 ~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~------------~ 107 (374)
T PRK05839 41 FIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFD------------K 107 (374)
T ss_pred HHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcC------------C
Confidence 334554443322 23454444556888888999999888 46789999999999888777665420 0
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
+|+ .|+++.++++.+...+...|+ +++.+|.+++ +.+|+++. .+ + .+++|++++++||||.+.+
T Consensus 108 ~gd-~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~--~~-~------~~k~v~i~nP~NPTG~~~s~ 174 (374)
T PRK05839 108 QNP-TIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEK--EL-Q------EVDLVILNSPNNPTGRTLSL 174 (374)
T ss_pred CCC-EEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchh--hh-c------cccEEEEeCCCCCcCcccCH
Confidence 334 889999999999999999998 8899998753 45554433 22 1 2789999999999999966
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccC-----CCC--CCccceeCccccC-CCcccceEEEEeCchhh
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLT-----GIE--RADSVTWNPHKLM-GTLLQCSTIHFKQDGLL 312 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-----~~~--~~D~~~~s~hK~~-~~p~~~g~~~~~~~~~~ 312 (480)
+++|.++|+++|+++++|++|+......+. .. ... +.. .--+++.|++|.+ ..+..+|+++. ++...
T Consensus 175 ~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~-~s-~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~ 251 (374)
T PRK05839 175 EELIEWVKLALKHDFILINDECYSEIYENTPP-PS-LLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASIL 251 (374)
T ss_pred HHHHHHHHHHHHcCCEEEeccchhhcccCCCC-CC-HhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHH
Confidence 677788899999999999999875321111 00 111 000 1125667999975 45578999886 44444
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
....... .+... + ...+...++...+ ..+.+++..++..+..+.+.+.|.. .
T Consensus 252 ~~~~~~~-~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~- 304 (374)
T PRK05839 252 KKYKAYR-TYLGC-----------------A---SPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILGI-----T- 304 (374)
T ss_pred HHHHHHH-hhcCC-----------------C---CChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcCC-----C-
Confidence 4332111 11000 0 1111111121111 2344555566666666666554422 2
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC----cccEEEEecccCCCCHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND----LPNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~----~~~~~R~~~~~~~~t~~di 466 (480)
.|..+.++|.-.+. ..++..++.+ .|+.+. ++...+ ..+++|+++. .+++++
T Consensus 305 --~p~gg~fi~~~~~~-----------------~~~~~~~l~~~~gi~v~-pg~~f~~~~~~~~~iRis~~---~~~~~~ 361 (374)
T PRK05839 305 --IPPATFYVWLPVDN-----------------DEEFTKKLYQNEGIKVL-PGSFLGRNGIGKGYVRIALV---YDTPKL 361 (374)
T ss_pred --CCCeeEEEEEeCCC-----------------hHHHHHHHHHHCCEEEe-CchhhCCCCCCCCeEEEEec---CCHHHH
Confidence 46666665532221 1245566654 775444 332222 1479999953 369999
Q ss_pred HHHHHHHHHhhc
Q psy12303 467 DFLLTEMDRLGH 478 (480)
Q Consensus 467 ~~~~~~l~~~~~ 478 (480)
...+++|.++++
T Consensus 362 ~~~l~~l~~~l~ 373 (374)
T PRK05839 362 EKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHhh
Confidence 999999998765
No 221
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.83 E-value=2.2e-18 Score=169.10 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=155.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~ 190 (480)
.++.+.+++++|.+. +++++||++|+..++.+... ||+ .|+++...|.+.. ..+...|+
T Consensus 57 ~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~~--------------~Gd-~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 57 AAFEERIAALEGAER--AVATATGMSAIQAALMTLLQ--------------AGD-HVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEecCCcchHHHHHHHHHHHhCC
Confidence 345566888999854 78999999999999877653 456 6777777776533 34455666
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
++..++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....
T Consensus 120 ---~v~~v~~~-----d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~ 185 (380)
T TIGR01325 120 ---EVSFVDPT-----DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ 185 (380)
T ss_pred ---EEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 77788765 788998888654 8999999999999999999999999999999999999998654322
Q ss_pred ccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
+ ... ++|+++.|++|+++++. ..|++++.+++..+.... +... .+.....
T Consensus 186 p-l~~-------g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~----~~~~-----------------~g~~~~p 236 (380)
T TIGR01325 186 P-LKL-------GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV----YLRH-----------------TGPAMSP 236 (380)
T ss_pred c-hhh-------CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH----HHHh-----------------hCCCCCH
Confidence 2 233 78999999999999763 344444455544433221 1100 1111234
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..+|..++ +.+.+..++++..+++..+.+.|++ +|+++-+
T Consensus 237 ~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~-~p~v~~V 276 (380)
T TIGR01325 237 FNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQA-QPQVQAV 276 (380)
T ss_pred HHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHc-CCCccEE
Confidence 45566554 4667778889999999999999999 8887643
No 222
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2e-18 Score=167.65 Aligned_cols=219 Identities=14% Similarity=0.136 Sum_probs=165.8
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|+. ++++-|... ++++++|+.|+..++.+... ||+ .|+++...|..+...+
T Consensus 60 ~nPt~~~le~~----la~LEg~~~--a~~~~SGmaAi~~~~~~ll~--------------~GD-~Vv~~~~~Yg~t~~l~ 118 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGAG--CALYPCGAAAVANAILAFVE--------------QGD-HVLMTGTAYEPTQDFC 118 (395)
T ss_pred CChhHHHHHHH----HHHHhCCCe--EEEEhHHHHHHHHHHHHHcC--------------CCC-EEEEeCCCcHHHHHHH
Confidence 45776677766 777767653 88888999999998877643 556 7778777887777665
Q ss_pred ----HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC--cEEEe
Q psy12303 186 ----AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN--MWLHV 259 (480)
Q Consensus 186 ----~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~--~~l~v 259 (480)
...|+ ++.+++.. |.++++++++++ |++|++++++|++|.+.||++|+++|+++| ++++|
T Consensus 119 ~~~l~~~Gi---~v~~vd~~-----d~~~l~~~l~~~------TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV 184 (395)
T PRK08114 119 SKILSKLGV---TTTWFDPL-----IGADIAKLIQPN------TKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI 184 (395)
T ss_pred HHHHHhcCc---EEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE
Confidence 33455 77777643 788999999765 899999999999999999999999999985 99999
Q ss_pred eccccccccccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 260 DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 260 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
|++++.+.. .+..++ ++|+++.|.|||++++. ..|+++ .+++........ .+.
T Consensus 185 DnT~a~p~~-~~pl~~-------GaDivv~S~tKyl~Ghsdv~~G~v~-~~~~~~~~l~~~--~~~-------------- 239 (395)
T PRK08114 185 DNTWAAGVL-FKALDF-------GIDISIQAGTKYLVGHSDAMIGTAV-ANARCWEQLREN--SYL-------------- 239 (395)
T ss_pred ECCCccccc-cCHHHc-------CCcEEEEcCcccccCCCcceeEEEE-cCHHHHHHHHHH--HHh--------------
Confidence 999999866 666667 99999999999999884 566555 444332221100 000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.|....+..+|+.++. .+.+.-+++++.+++..+.+.|++ +|.++-+
T Consensus 240 -----~G~~~~p~~a~l~~rg--l~TL~lR~~~~~~na~~va~~L~~-hp~V~~V 286 (395)
T PRK08114 240 -----MGQMVDADTAYMTSRG--LRTLGVRLRQHEESSLKVAEWLAE-HPEVARV 286 (395)
T ss_pred -----ccCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHc-CCCEeEE
Confidence 1222456678876654 667888899999999999999999 8887643
No 223
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=3.5e-18 Score=166.65 Aligned_cols=218 Identities=15% Similarity=0.155 Sum_probs=157.8
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|++ ++++.|.+ .+++++||++|+..++.+... ||+ .|++++..|......+
T Consensus 48 gnPt~~~lE~~----lA~l~g~~--~~~~~~sG~~Ai~~al~all~--------------~GD-~Vl~~~~~y~~t~~~~ 106 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGA--GCYLYPSGLAAVTNSILAFVK--------------AGD-HVLMVDSAYEPTRYFC 106 (377)
T ss_pred CCccHHHHHHH----HHHHhCCC--cEEEECcHHHHHHHHHHHhcC--------------CCC-EEEEcCCCcHHHHHHH
Confidence 34655666665 77888875 489999999999999887743 556 6777777776655433
Q ss_pred ----HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 186 ----AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 186 ----~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
...|+ ++..++.+ +.++++++++++ +++|++++++|++|.+.|+++|+++|+++|+++++|+
T Consensus 107 ~~~~~~~gi---~v~~~d~~-----~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~ 172 (377)
T TIGR01324 107 DIVLKRMGV---DITYYDPL-----IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDN 172 (377)
T ss_pred HHHHHhcCc---EEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 33455 56665432 237788887665 8999999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+|+.+...- ...+ ++|+++.|.+||++++.+ .|+++ .+++.+..... ..+.
T Consensus 173 t~a~g~~~~-pl~~-------gaDivv~S~tK~l~G~~d~~gG~v~-~~~~~~~~l~~--~~~~---------------- 225 (377)
T TIGR01324 173 TWAAGLLFK-PLEH-------GVDISIQAGTKYLVGHSDIMIGTVV-ANARTWDQLRE--HSYL---------------- 225 (377)
T ss_pred CCccccccC-cccc-------CceEEEecCceeccCCCCceEEEEE-eCHHHHHHHHH--HHHH----------------
Confidence 999886633 2344 899999999999998754 45555 44444332221 0111
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
.|....+..+|..++. .+.+..+++++.+++..+.+.|++ .|.++-
T Consensus 226 ---~G~~l~p~~a~~~~rg--l~tl~~R~~~~~~~a~~la~~L~~-~p~v~~ 271 (377)
T TIGR01324 226 ---MGQMVDADDAYTTLRG--LRTLGVRLKQHQESSLAIAKWLSE-QPEVAR 271 (377)
T ss_pred ---hCCCCCHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHHh-CCCcCE
Confidence 1222345567776664 567778899999999999999999 787743
No 224
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=2.8e-18 Score=167.97 Aligned_cols=217 Identities=12% Similarity=0.086 Sum_probs=159.2
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH-cCCCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-CGLGTDN 194 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-~g~~~~~ 194 (480)
++.+.++++.|.+ ++++++||++|+..++.+... ||+ .|+++...|.+....+.. .+.+..+
T Consensus 55 ~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~all~--------------~GD-~Vl~~~p~y~~~~~~~~~~~~~~~~~ 117 (382)
T TIGR02080 55 LLQQALAELEGGA--GAVVTNTGMSAIHLVTTALLG--------------PDD-LLVAPHDCYGGTYRLLNALAKKGCFR 117 (382)
T ss_pred HHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcC--------------CCC-EEEEcCCCcHHHHHHHHHHHhhcCeE
Confidence 3455688888853 599999999999988887743 556 788888888865554433 3332225
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+..++. .|+++++++++++ |++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+....+ ..
T Consensus 118 v~~~d~-----~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~p-l~ 185 (382)
T TIGR02080 118 VLFVDQ-----GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNP-LA 185 (382)
T ss_pred EEEECC-----CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCc-hh
Confidence 555432 3889999988765 89999999999999999999999999999999999999987643322 12
Q ss_pred CcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. ++|+++.|++|+++++.+ .|+++++++...+...... .+ .|.....+.+
T Consensus 186 ~-------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~-~~--------------------~g~~~sp~~a 237 (382)
T TIGR02080 186 L-------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA-NN--------------------LGVTGGAFDS 237 (382)
T ss_pred h-------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH-Hc--------------------cCCCCCHHHH
Confidence 3 689999999999987655 6776666665544322110 11 1112456677
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
|+.++. .+.+..+++++.+++..+.+.|++ +|.++-+
T Consensus 238 ~l~lr~--l~tl~~R~~~~~~na~~~a~~L~~-~p~v~~V 274 (382)
T TIGR02080 238 YLTLRG--LRTLVARMRLQQRNAQAIVEYLQT-QPLVKKI 274 (382)
T ss_pred HHHHcc--cchHHHHHHHHHHHHHHHHHHHHh-CCCeeEE
Confidence 777654 667888899999999999999999 8888644
No 225
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=2.3e-18 Score=169.12 Aligned_cols=307 Identities=15% Similarity=0.101 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
..+++.+++++++|.+ .+++++|||.|+..++.++.- .||+ .|+++..+|+++..++...|+
T Consensus 32 ~~~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~-------------~~Gd-~Viv~~~t~~~~~~~~~~~G~-- 93 (375)
T PRK11706 32 FTRRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDI-------------QPGD-EVIMPSYTFVSTANAFVLRGA-- 93 (375)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCC-------------CCCC-EEEECCCCcHHHHHHHHHcCC--
Confidence 3455667788888886 499999999998887765421 1556 899999999999999999998
Q ss_pred CCeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 193 DNCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 193 ~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++++++ +.+|++++++++++. +++|++++ ++|...++++|.++|+++|+++++|+||+.+.....
T Consensus 94 -~~v~~d~d~~~~~~d~~~le~~i~~~------tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~ 163 (375)
T PRK11706 94 -KIVFVDIRPDTMNIDETLIEAAITPK------TRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKG 163 (375)
T ss_pred -EEEEEecCCCcCCcCHHHHHHhcCCC------CeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCC
Confidence 8889998875 589999999998764 78888764 589999999999999999999999999998763221
Q ss_pred cccCcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCC-----cccccccccccCcccCCCCccccCC
Q psy12303 272 KYRHPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMS-----AEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
. .. |. ..|.-++|+| |.+..+ ..|+++++++++...+.... ........ ...+... .+..+
T Consensus 164 ~----~~-g~-~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--~~g~~ 231 (375)
T PRK11706 164 R----AL-GT-IGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRGQ---VDKYTWV--DIGSS 231 (375)
T ss_pred e----ee-ec-CcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhccC---CCcceee--ecccc
Confidence 1 11 11 3466667777 998753 34556666665544322111 00000000 0000000 01111
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--C-eEEecCCce---eEEEEE-eecCccCCCchhhH
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD--K-FYLILEPEM---VNVSFW-YLPTRVRNMPHEKR 417 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~--g-~~~~~~~~~---~~v~f~-~~~~~~~~~~~~~~ 417 (480)
.+...+.+...+.. .+.+++..++.+++++++.+.|.. ++ + +.+...+.. +...+. ..+.. .+
T Consensus 232 ~~~~~~~aa~~~~q--l~~l~~~~~~R~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---- 301 (375)
T PRK11706 232 YLPSELQAAYLWAQ--LEAADRINQRRLALWQRYYDALAP-LAEAGRIELPSIPDDCKHNAHMFYIKLRDL---ED---- 301 (375)
T ss_pred cCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcC-CCcCCeeecCCCCCCCceeeEEEEEEECCc---CC----
Confidence 11222333222333 456788888999999999999988 66 2 443211211 111111 11111 00
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEe-eee---------e---CC--------cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVG-YQP---------L---ND--------LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~-~~~---------~---~~--------~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.|.++|+.... +.+ . .+ ....+-+. +++..+++|++++++.|+++
T Consensus 302 -------r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~~ 373 (375)
T PRK11706 302 -------RSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQRTVIDTILEF 373 (375)
T ss_pred -------HHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHHHHHHHHHHHH
Confidence 23566777777754210 000 0 00 02346666 78889999999999999986
Q ss_pred h
Q psy12303 477 G 477 (480)
Q Consensus 477 ~ 477 (480)
.
T Consensus 374 ~ 374 (375)
T PRK11706 374 F 374 (375)
T ss_pred h
Confidence 4
No 226
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.83 E-value=6.8e-18 Score=167.03 Aligned_cols=302 Identities=12% Similarity=0.069 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+.++++++.+ .+.|+++||+||..|++++|.... .++. +| +..|......|.+...+....+.
T Consensus 77 ~~~~~la~~L~~~~~~~--~~~f~~SGseA~e~Alk~ar~~~~----~~~~---~~r~~ii~~~~~yHG~~~~~~~~~~~ 147 (397)
T TIGR03246 77 EPVLRLAKKLVDATFAD--KVFFCNSGAEANEAALKLARRYAL----DKHG---ADKSEIVAFKNSFHGRTLFTVSVGGQ 147 (397)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHH----hcCC---CCCCEEEEECCCcCCccHHHHHhcCC
Confidence 34456677788887653 699999999999999999986411 1110 12 32566666778887766665442
Q ss_pred C---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHHHHHHHcCcEE
Q psy12303 191 G---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~~i~~~~~~~l 257 (480)
. ...+..+|.+ |++++++++++. +++|+++..+++.|.+. .+++|.++|++||+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ll 216 (397)
T TIGR03246 148 PKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALL 216 (397)
T ss_pred cccccCCCCCCCceEEeCCC-----CHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 1 1133445544 889999988643 88999998887778653 3999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|.+.......+.. ...++ .+|+++ +.|.++++++.|+++.++ ++.+..... .+. .
T Consensus 217 I~DEv~tG~Gr~G~~~a~-~~~gv-~pDi~t--~~K~lggG~pigav~~~~-~i~~~~~~~-----~~~----------~ 276 (397)
T TIGR03246 217 IFDEVQTGVGRTGELYAY-MHYGV-TPDILT--SAKALGGGFPIGAMLTTT-EIAAHLKVG-----THG----------T 276 (397)
T ss_pred EEechhhcCCccccchhh-hhcCC-CCCEEE--eehhhhCCcceeEEEEcH-HHHHhccCC-----CcC----------C
Confidence 999999766443322222 23345 578876 579997778889988754 333322110 000 0
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEec--CCceeEEEEEeecCccCCCch
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLIL--EPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~--~~~~~~v~f~~~~~~~~~~~~ 414 (480)
++ ++.+....++.+++..+. -.++.++..++.++|.+.|++ +. .+.++. .....++.+.+.+..
T Consensus 277 --t~-~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~-l~~~~~~~~~vrg~G~~~~i~~~~~~------ 343 (397)
T TIGR03246 277 --TY-GGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEK-INARYNVFSEIRGKGLLIGAVLTEAY------ 343 (397)
T ss_pred --CC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHH-HHhcCCCeEeeecCceEEEEEEcCch------
Confidence 00 111122333344444432 245678888888999888877 42 111221 122233333222110
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
......+.+.|.++|.++... + .+++|++ ++..+|++||++++++|++.+++
T Consensus 344 -------~~~~~~~~~~l~~~Gv~~~~~----g-~~~lR~~-p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 344 -------QGKAKQFVNAAAEEGVIALIA----G-PNVVRFA-PSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -------hhHHHHHHHHHHHCCeEEeec----C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 011346778888999665432 3 4689998 88999999999999999987754
No 227
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.83 E-value=3e-18 Score=171.38 Aligned_cols=364 Identities=12% Similarity=0.050 Sum_probs=205.0
Q ss_pred hHHhHHHHHHHHcCcCCcchh-cChhhHHHHHHHHHHHHHHhCC---CCC--CeEECCChhHHHHHHHHHHHHhcCchhH
Q psy12303 85 VVSMAGEWLIATANTNMFTYE-IAPVFILMETVVLEKMRQIIGW---QGG--DSILAPGGSISNLYAFLAARHKMFPTYK 158 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~~~g~---~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~ 158 (480)
++..+.++..+..+. .|. ........+..+.+++.+.++. +++ ++++|+|+++|+..++.++....+
T Consensus 108 ~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~l---- 180 (521)
T TIGR03801 108 PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANEL---- 180 (521)
T ss_pred CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhc----
Confidence 344555555554432 353 3333445555555777776542 333 799999999999998876432110
Q ss_pred hcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--C-----CCCCHHHHHHHHHHHHHCCCccEEEEec
Q psy12303 159 EKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--R-----GRLIPSELERLVLERKAKGDIPFFVNCT 231 (480)
Q Consensus 159 ~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~-----~~~d~~~L~~~i~~~~~~~~~~~~v~~~ 231 (480)
..||+ .|++..+.++.+...+...|.+. +++.++.++ + +.+|.++|++++++. +++|+++
T Consensus 181 -----l~pGD-~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~------~kai~l~ 247 (521)
T TIGR03801 181 -----LKKGD-KIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPS------IKALFVV 247 (521)
T ss_pred -----CCCCC-EEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCC------CcEEEEe
Confidence 01666 88889999999999888886544 667777653 2 789999999877654 8999999
Q ss_pred cCCCccccccC---hHHHHHHHHHc--CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEE
Q psy12303 232 SGTTVLGAFDP---IEEIADICQKY--NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIH 305 (480)
Q Consensus 232 ~~~~~~G~~~~---l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~ 305 (480)
+|+||||.+.+ +++|+++|++| ++++++|++|+.+.. .+.. .......--+++.|++|.++. +..+|+++
T Consensus 248 nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s-l~~~~~~~vI~v~SfSK~fg~~G~RlG~i~ 323 (521)
T TIGR03801 248 NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRS-LFAELPYNTIGVYSFSKYFGATGWRLGTIA 323 (521)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccc-hhhhCCCCEEEEEcchhhccCchhhhhhhh
Confidence 99999999977 78888889987 899999999987542 1111 111111223567799999864 47899998
Q ss_pred EeCchhhHhhhc-----------CCccccccccccc-------CcccCCCC-ccccCCCCCCc-hHHHHHHHHh--cHHH
Q psy12303 306 FKQDGLLISCNQ-----------MSAEYLFMQDKLY-------DVRYDTGD-KVIQCGRHNDI-FKLWLQWRAK--GDEG 363 (480)
Q Consensus 306 ~~~~~~~~~~~~-----------~~~~~l~~~~~~~-------~~~~~~~~-~~~~~~r~~~~-l~~~~~l~~~--g~~~ 363 (480)
..+......... ..-..+......- ........ .+...+..... .++.+....+ +...
T Consensus 324 ~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y 403 (521)
T TIGR03801 324 LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAY 403 (521)
T ss_pred cCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhH
Confidence 765422111100 0000000000000 00000000 00000111110 1111111122 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEE-ecCCceeEEEEEeecCccCCCchhhHHHHhhh--hhHHHHHHHHhcccEEE
Q psy12303 364 FEKQIDRLMELAEYMVKKIKSMPDKFYL-ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGE--ITPILKGRMMQAGTMMV 440 (480)
Q Consensus 364 ~~~~~~~~~~l~~~l~~~l~~~~~g~~~-~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~--~~~~i~~~l~~~g~~~~ 440 (480)
.+++.+..++..+.+.+.| |+.+ ..+|..+.++|.-.+.-.......++...+.. -..++..+|.++..+++
T Consensus 404 ~~~~~~~~~~R~~~l~~~L-----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v 478 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL-----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVL 478 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEE
Confidence 5666666666766666666 3322 13567777776544321000000011111110 12456667766544544
Q ss_pred eeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 441 GYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 441 ~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.++...+ ..+++|+|+.+ .+++++.+..++|++++++
T Consensus 479 ~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 479 LPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred eCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Confidence 4443333 24689999543 5789999999999987754
No 228
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=3e-18 Score=169.75 Aligned_cols=240 Identities=17% Similarity=0.164 Sum_probs=163.7
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH---
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--- 182 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--- 182 (480)
..|....+|+ .++++.|.+ ..++++||+.|+..++..... ||+ .|+++...|....
T Consensus 62 ~~p~~~~Le~----~lA~leg~~--~al~~~sG~~Ai~~al~~ll~--------------~GD-~Vlv~~~~y~~t~~~~ 120 (431)
T PRK08248 62 MNPTTDVFEK----RIAALEGGI--GALAVSSGQAAITYSILNIAS--------------AGD-EIVSSSSLYGGTYNLF 120 (431)
T ss_pred CCchHHHHHH----HHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEccCchhhHHHHH
Confidence 3455455554 488888875 489999999999999877643 556 7878887776533
Q ss_pred -HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 183 -SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 183 -~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
..+...|+ ++++++.+ |+++++++++++ +++|++++++||+|.+.|+++|.++|+++|+++++|+
T Consensus 121 ~~~~~~~Gv---~v~~vd~~-----d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~ 186 (431)
T PRK08248 121 AHTLPKLGI---TVKFVDPS-----DPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDN 186 (431)
T ss_pred HHHHHhCCE---EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeC
Confidence 33455666 77888763 899999988764 8899999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcc--cC---
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR--YD--- 335 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~--- 335 (480)
+++.+....+ ..+ ++|+++.|+||++++|. .+|++++.......... ....++...+..+... ++
T Consensus 187 t~a~~~~~~p-l~~-------gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 257 (431)
T PRK08248 187 TFASPYLLRP-IEH-------GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGS-GKFPGLTEPDPSYHGLVYTDAVG 257 (431)
T ss_pred CCCccccCCh-hHc-------CCCEEEEcCccccCCCCCceEEEEEeCCccccccc-cccccccCCccccccchhhhhhc
Confidence 9986543333 244 89999999999999874 36777765432110000 0000010000000000 00
Q ss_pred --------CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 336 --------TGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 336 --------~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
...+....|.......+|+.++ |.+.+..+++++.+++..+.+.|++ +|+++-+
T Consensus 258 ~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~-~p~v~~V 319 (431)
T PRK08248 258 EAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEE-HEAVEWV 319 (431)
T ss_pred hhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHh-CCCcceE
Confidence 0001112344456667776655 4677888999999999999999999 8987643
No 229
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=3.5e-18 Score=169.01 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=159.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g~ 190 (480)
+++.+.++++.|.+ ..+++++|+.|+..++.++.. +|+ +|+++...|.+... .+...|+
T Consensus 72 ~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~ll~--------------~Gd-~VI~~~~~y~~t~~~~~~~l~~~Gi 134 (437)
T PRK05613 72 EALENRIASLEGGV--HAVAFASGQAAETAAILNLAG--------------AGD-HIVTSPRLYGGTETLFLVTLNRLGI 134 (437)
T ss_pred HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEECCCccHHHHHHHHHHHHhcCe
Confidence 34555688999885 367777778888877766532 556 78888889988743 3355566
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
++.+++ +. .|+++++++++++ |++|++++++|++|.+.|+++|+++|+++|+.+|||++++.+...
T Consensus 135 ---~v~~vd-~~---~d~e~l~~~l~~~------tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~- 200 (437)
T PRK05613 135 ---EVTFVE-NP---DDPESWQAAVQPN------TKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV- 200 (437)
T ss_pred ---EEEEEC-CC---CCHHHHHHhCCcc------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-
Confidence 778886 32 2899999999876 889999999999999999999999999999999999999877653
Q ss_pred ccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhh-Hhhh--cCCcccccccccccC--cccCCC-------
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLL-ISCN--QMSAEYLFMQDKLYD--VRYDTG------- 337 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~-~~~~--~~~~~~l~~~~~~~~--~~~~~~------- 337 (480)
....+ ++|++++|+||+++++ -+.|++++.+.... .... ....+++...+.... ...+.+
T Consensus 201 ~p~~~-------GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T PRK05613 201 RPLEL-------GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLK 273 (437)
T ss_pred ChHHh-------CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHH
Confidence 22244 8999999999999864 24466666433211 0000 000011101000000 000000
Q ss_pred ---CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 338 ---DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 338 ---~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+....|-..+...+|+.++ |.+.+..+++++.+++..+.+.|++ +|.+.-+
T Consensus 274 ~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~-hp~V~~V 328 (437)
T PRK05613 274 ARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNN-HEKVAKV 328 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHc-CCCcceE
Confidence 01112233456677776665 4677888999999999999999999 8887533
No 230
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=4.9e-19 Score=171.97 Aligned_cols=233 Identities=14% Similarity=0.026 Sum_probs=163.7
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|...++|+. ++++.|.+ .++.++||++|+..++. +.. ||+ +|+++...|......+
T Consensus 52 ~~p~~~~le~~----lA~leg~~--~~v~~~sG~aAi~~~l~-~l~--------------~GD-~VI~~~~~yg~~~~~~ 109 (364)
T PRK07269 52 KNPTRAKLEET----LAAIESAD--YALATSSGMSAIVLAFS-VFP--------------VGS-KVVAVRDLYGGSFRWF 109 (364)
T ss_pred CCccHHHHHHH----HHHHhCCC--eEEEeCCHHHHHHHHHH-HhC--------------CCC-EEEEecCCcCchHHHH
Confidence 44555666655 77777765 48999999999998884 332 556 5666655554433322
Q ss_pred HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 186 AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 186 ~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
....... .+ .+ ++..|+++++++++++ |++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.
T Consensus 110 ~~~~~~~-~~-~~----~~~~d~~~l~~~i~~~------TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~ 177 (364)
T PRK07269 110 NQQEKEG-RF-HF----TYANTEEELIAAIEED------TDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS 177 (364)
T ss_pred HHHHhcC-cE-EE----EecCCHHHHHHhcCcC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 2211100 11 11 1235899999999765 89999999999999999999999999999999999999876
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+....+ ... ++|+++.|++|+++++.. .|+++++++++.+...... .+ .
T Consensus 178 ~~~~~p-l~~-------gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~~--------------------~ 228 (364)
T PRK07269 178 PIYQRP-IEL-------GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-NT--------------------T 228 (364)
T ss_pred cccCCc-hhh-------CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH-HH--------------------h
Confidence 543222 233 899999999999997654 5666766665544332100 00 1
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE-ecCCceeEEEEEe
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL-ILEPEMVNVSFWY 404 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~-~~~~~~~~v~f~~ 404 (480)
|.....+.+|..++. .+.+..++++..+++..+.+.|++ +|++.- +-++..++++|..
T Consensus 229 G~~~s~~~a~l~~~~--L~tL~~r~~~~~~na~~~a~~L~~-~p~v~~v~ypg~gg~~sf~~ 287 (364)
T PRK07269 229 GAVLSPFDSYLLMRG--LKTLSLRMERSTANAQEVVAFLKK-SPAVKEVLYTGKGGMISFKV 287 (364)
T ss_pred CCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEeCCCcCcEEEEEE
Confidence 222456677777665 456888999999999999999999 898754 4477788888875
No 231
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=8.9e-18 Score=164.38 Aligned_cols=282 Identities=14% Similarity=0.088 Sum_probs=184.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++.++.+++++++|+|+++++..++.++.+ ||+ .|++..++|+.+...+...|. .+
T Consensus 69 ~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~--------------~gd-~V~v~~P~y~~~~~~~~~~g~---~~ 130 (357)
T PRK14809 69 DLTAALADRWDVSPEQVWLANGGDGALDYLARAMLD--------------PGD-TVLVPDPGFAYYGMSARYHHG---EV 130 (357)
T ss_pred HHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcC--------------CCC-EEEEeCCChHHHHHHHHHcCC---eE
Confidence 466677888899888999999999999888877654 556 788888888877777888887 67
Q ss_pred EEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeeccccccccccc
Q psy12303 196 VEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 196 ~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~ 271 (480)
+.+|++. ++.++.+++++..+ . +++|++++++||||.+.+.+++.++++.. ++++++|++|+.......
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~ 203 (357)
T PRK14809 131 REYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPS 203 (357)
T ss_pred EEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCch
Confidence 7777753 46777777766542 1 67899999999999999988888777654 789999999987653111
Q ss_pred cccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
. .+..... .--+++.|++|.++ .+..+|+++.. ++.+........++. ...+
T Consensus 204 ~--~~~~~~~-~~vi~~~SfSK~~~~~GlRiG~~~~~-~~~~~~~~~~~~~~~-----------------------~~~~ 256 (357)
T PRK14809 204 A--VALVEER-DDVAVLRTFSKAYGLAGLRLGYAVVP-EEWADAYARVNTPFA-----------------------ASEL 256 (357)
T ss_pred h--HHHHhhC-CCEEEEecchhHhcCcchhheeeecC-HHHHHHHHHhCCCCC-----------------------CCHH
Confidence 0 0011111 11245668999997 45789998864 344444332211110 1233
Q ss_pred HHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
...+++..+ ..+.+++..+...+..+.+.+.|.. . . + ++. +++.|.-.+ . ..++.
T Consensus 257 ~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~---~-~~~-g~f~~~~~~-~----------------~~~~~ 312 (357)
T PRK14809 257 ACRAGLAALDDDEHVERTVETARWAREYIREELDA-P-T---W-ESA-GNFVLAEVG-D----------------ASAVA 312 (357)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC-c-c---C-CCC-CCEEEEECC-C----------------HHHHH
Confidence 344444444 2344566666677777777777765 2 1 1 333 344332111 0 13456
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.+.+.|+.+... ...+..+++|+++. +.+++++++++|+++++
T Consensus 313 ~~l~~~gv~v~~g-~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 313 EAAQERGVIVRDC-TSFGLPECIRITCG----TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHCCEEEEEC-ccCCCCCeEEEecC----CHHHHHHHHHHHHHHhc
Confidence 6777777544443 33333579999943 47899999999998765
No 232
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.83 E-value=1.6e-17 Score=162.74 Aligned_cols=288 Identities=13% Similarity=0.037 Sum_probs=185.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++.++++++++++|+|+++++..++.+.. +|+ .|++..++++.+...++.+|+ ++
T Consensus 61 ~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~---------------~g~-~vlv~~P~y~~~~~~~~~~g~---~~ 121 (360)
T PRK07392 61 ELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA---------------QLR-AVYLITPAFGDYRRALRAFGA---TV 121 (360)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC---------------CCC-eEEEECCCcHHHHHHHHHcCC---eE
Confidence 56666777789988899999999999988876542 335 788899999999999999998 88
Q ss_pred EEeeCCCCCC-----CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 196 VEVPSDKRGR-----LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 196 ~~v~~~~~~~-----~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+.+|.+.++. .+++++++.. .+++++++++++||||.+.+.++|.++++++++ +++|++|..+....
T Consensus 122 ~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~ 193 (360)
T PRK07392 122 KELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPD 193 (360)
T ss_pred EEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCc
Confidence 8999875433 3444444322 127899999999999999999999999999985 67799998765421
Q ss_pred cccc-CcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYR-HPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~-~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.... ...+... .--+++.|++|.++ .+..+|+++.. ...++........+- ..
T Consensus 194 ~~~s~~~~~~~~-~~vi~i~S~SK~~~l~GlRiG~~v~~-~~~~~~~~~~~~~~~-----------------------~s 248 (360)
T PRK07392 194 AEQSLIPCLAEY-PNLIILRSLTKFYSLPGLRLGYAIAH-PDRLQRWQQWRDPWP-----------------------VN 248 (360)
T ss_pred cccchHHHhhcC-CCEEEEEechhhhcCCchheeeeeCC-HHHHHHHHhhCCCCC-----------------------CC
Confidence 1000 0011111 11256669999998 55889999864 444443321111100 12
Q ss_pred chHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+..+++...+.. +..+...+...+.++++.+.|++ ++++.+. +..+.+.+.-.+.. ..+
T Consensus 249 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~--~~~~~fl~~~~~~~----------------~~~ 309 (360)
T PRK07392 249 GLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS-LPGLTPL--PSAANFLLVQSQGS----------------ALQ 309 (360)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEC--CCCCCEEEEEcCCC----------------HHH
Confidence 3333433333322 33344456667788889999998 8898864 34455544222110 134
Q ss_pred HHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 428 LKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 428 i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+...+. +.|+.+.....+.+ ..+++|+++. +.++.+++.+.|+++.+
T Consensus 310 l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~----~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 310 LQEKLLQQHRILIRDCLSFPELGDRYFRVAVR----TEAENQRLLEALAAILA 358 (360)
T ss_pred HHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 556654 45654443332222 1479999954 35667788888877654
No 233
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.83 E-value=8.8e-18 Score=164.88 Aligned_cols=295 Identities=11% Similarity=0.018 Sum_probs=187.5
Q ss_pred chhcChhhHHHHHHHHHHHHHHhC---CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIG---WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g---~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.|....+..++.+.+.+++.+..| ++++++++|+|+++++..++.++.-. ||+ .|+++.++|+
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~-------------~gd-~Vl~~~p~y~ 122 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLG-------------PGD-VVVIPELAYP 122 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCC-------------CCC-EEEECCCCcc
Confidence 455455667888888999988776 44689999999999988766555211 555 7889999999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcE
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMW 256 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~ 256 (480)
.+..+++.+|. +++.++ +++++++ + ++++|++++++||||.+.+ +++|.++|+++|++
T Consensus 123 ~~~~~~~~~g~---~~~~~~-------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ 183 (364)
T PRK07865 123 TYEVGARLAGA---TVVRAD-------SLTELGP---Q------RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAV 183 (364)
T ss_pred cHHHHHHhcCC---EEEecC-------ChhhCCc---c------cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 99999999988 665553 2333322 1 2789999999999998865 67888899999999
Q ss_pred EEeeccccccccccccccC--cccCCC-CCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 257 LHVDAAWGGGLLLSKKYRH--PRLTGI-ERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~--~~~~~~-~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
+++|++|+......+.... +...+. ..-.+++.|++|.++.| ..+|+++. +++...............
T Consensus 184 ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~~~~~~~~~~~~~------- 255 (364)
T PRK07865 184 VASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVAELLEVRKHAGMM------- 255 (364)
T ss_pred EEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHHHHHHHHHhcCCC-------
Confidence 9999999875432111000 000010 12237788999998644 67888764 555544332111000000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
...+...+....+. .+.+++..+...+..+.+.+.|++ . |+.+. .|..+.+.+...+..
T Consensus 256 --------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~~~~--- 315 (364)
T PRK07865 256 --------------VPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEA-A-GFRVD-HSEAGLYLWATRGED--- 315 (364)
T ss_pred --------------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-c-CCccc-CCCccEEEEEeCCCC---
Confidence 11222222223232 344566777778888999999998 4 77753 455565544321110
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..++.+.|.+.|+.+.....+.. ..+++|+++.. +++++++.+++|+
T Consensus 316 -------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~~~~~~l~ 363 (364)
T PRK07865 316 -------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIAAAVERLA 363 (364)
T ss_pred -------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHHHHHHHhh
Confidence 12455677788865544322211 25799999543 6899999998875
No 234
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=161.50 Aligned_cols=273 Identities=12% Similarity=0.101 Sum_probs=181.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++++++++|.+++++++|+|+++++..++.+. +|+ .|+++.+.|..+...++..|. ++
T Consensus 59 ~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~----------------~gd-~V~v~~P~y~~~~~~~~~~g~---~~ 118 (337)
T PRK03967 59 PLREAIAEFYGLDAENIAVGNGSDELISYLVKLF----------------EGK-HIVITPPTFGMYSFYAKLNGI---PV 118 (337)
T ss_pred HHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh----------------CCC-eEEEeCCChHHHHHHHHHcCC---eE
Confidence 4566788888898889999999999887655432 335 788888999888888888888 88
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccC
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH 275 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~ 275 (480)
+.++.++++.+|++++++.+. . ++++++++|+||||.+.+.++|.++++ +++++++|++|..+.. .....
T Consensus 119 ~~v~~~~~~~~d~~~l~~~~~-~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~--~~~~~ 188 (337)
T PRK03967 119 IDVPLKEDFTIDGERIAEKAK-N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSG--KSLIG 188 (337)
T ss_pred EEeecCCCCCcCHHHHHHhcc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcc--cchHH
Confidence 999998778899999987642 2 678889999999999999999999995 7999999999986531 11000
Q ss_pred cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHH
Q psy12303 276 PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWL 354 (480)
Q Consensus 276 ~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~ 354 (480)
..... .--+++.|++|.++ .+..+|+++.. +............+- ...+...+
T Consensus 189 -~~~~~-~~vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~~~-----------------------~~~~~q~~ 242 (337)
T PRK03967 189 -LIDEY-PNLILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPPFS-----------------------LNILTMKI 242 (337)
T ss_pred -HHhhC-CCEEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCCCC-----------------------CCHHHHHH
Confidence 11111 11256679999998 45789999864 444444332221110 12223333
Q ss_pred HHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH
Q psy12303 355 QWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM 433 (480)
Q Consensus 355 ~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~ 433 (480)
+...+ ..+.+.+..++..+.++.+.+.|.+ . ..|..+.+++.. + .+.+.|.
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~-~------~~~~~~~~~~~~----------------~-----~~~~~l~ 294 (337)
T PRK03967 243 VRLALDHYDLIEERIDYIIKERERVRRELGE-Y------AYPSDANFLLLK----------------L-----DAYDYLL 294 (337)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc-C------cCCCCCcEEEEh----------------H-----HHHHHHH
Confidence 32222 2334555556666777778888776 3 124444444421 1 2457777
Q ss_pred hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 434 QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++|+.+... .... .+++|+++. +.++.+++++.|+++.+
T Consensus 295 ~~gi~v~~~-~~~~-~~~~Ri~~~----~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 295 ENGIVVRKL-SGRL-EGHIRVTVG----KREENDEFIKALKEIKE 333 (337)
T ss_pred HCCEEEEeC-CCCC-CCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 888544332 2122 569999944 57888888888887654
No 235
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=8.7e-18 Score=166.36 Aligned_cols=237 Identities=18% Similarity=0.132 Sum_probs=156.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH-cCCCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-CGLGTDN 194 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-~g~~~~~ 194 (480)
++.+.++++.|.+. .+++++|++|+..++.++.. ||+ .|+++...|......+.. +..-..+
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~~--------------~Gd-~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIAE--------------AGD-NIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHhC--------------CCC-EEEEeCCCcchHHHHHHHhcccceeE
Confidence 34455888888654 78899999999999987754 556 667776666644444432 2111115
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+.+++. .|+++++++++++ +++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+....+ ..
T Consensus 125 v~~~d~-----~d~e~le~ai~~~------tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p-~~ 192 (425)
T PRK06084 125 TRFAAH-----DDIAALEALIDER------TKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRP-FE 192 (425)
T ss_pred EEEECC-----CCHHHHHHHhccC------CcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCh-hh
Confidence 555554 3899999999765 88999999999999999999999999999999999999987654322 23
Q ss_pred CcccCCCCCCccceeCccccCCCcc-cceEEEEeCchh-hHhhhcCCcccccccccccCcc---cCCC----------Cc
Q psy12303 275 HPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGL-LISCNQMSAEYLFMQDKLYDVR---YDTG----------DK 339 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~---~~~~----------~~ 339 (480)
+ ++|+++.|++|+++++. ..|++++.+... ...... ....+...+..+... ...+ ..
T Consensus 193 ~-------gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (425)
T PRK06084 193 H-------GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKE-RFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVP 264 (425)
T ss_pred c-------CCCEEEECchhcccccccceeEEEEeCCccchhhccc-cccccccCCcccccchhhhhcchHHHHHHHHHHH
Confidence 3 79999999999998763 345555543221 111000 000111100000000 0000 00
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
....+.......+|+.++. .+.+..++++..+++..+.+.|++ +|++.-+
T Consensus 265 ~~~~g~~l~~~~a~l~lrg--l~tl~~R~~~~~~na~~la~~L~~-~p~v~~V 314 (425)
T PRK06084 265 LRNMGAALSPFNAFLILQG--LETLALRMERHTENALKVARYLQQ-HPQVAWV 314 (425)
T ss_pred HHhcCCCCCHHHHHHHHcC--cCcHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 1123444566777777654 677899999999999999999999 8987644
No 236
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.82 E-value=4.1e-18 Score=169.33 Aligned_cols=325 Identities=12% Similarity=0.021 Sum_probs=204.3
Q ss_pred HHHHHHHHcC-cCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeE--ECCChhHHHHHHHHHHHHhcCchhHhcCCC
Q psy12303 89 AGEWLIATAN-TNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSI--LAPGGSISNLYAFLAARHKMFPTYKEKGLS 163 (480)
Q Consensus 89 ~~~~l~~~~~-~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~--~t~ggt~a~~~al~~~~~~~~~~~~~~g~~ 163 (480)
+.+.+..... .....|....+..++.+++.+|+.+..+ .++++++ .|.|++.|...++.+++.-.
T Consensus 52 ~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~---------- 121 (404)
T PTZ00376 52 VRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL---------- 121 (404)
T ss_pred HHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc----------
Confidence 3344433332 2235576667778888888888765543 3556677 49999999888876543210
Q ss_pred ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 164 AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 164 ~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
.||+ .|++.+++|+.+...++.+|+ +++.+|.. +++.+|++.+++++++.. .+++++++++++||||.+.
T Consensus 122 -~~Gd-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPTG~~~ 193 (404)
T PTZ00376 122 -PAGT-TVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPTGVDP 193 (404)
T ss_pred -CCCC-EEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCC
Confidence 1556 899999999999999999998 88889983 347899999999986431 1257888899999999996
Q ss_pred C---hHHHHHHHHHcCcEEEeeccccccccccc--cc-cCcccCCCCCCccceeCccccCC-CcccceEEE--EeCchhh
Q psy12303 242 P---IEEIADICQKYNMWLHVDAAWGGGLLLSK--KY-RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIH--FKQDGLL 312 (480)
Q Consensus 242 ~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~--~~-~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~--~~~~~~~ 312 (480)
+ +++|.++|++|++++++|++|........ .. ....+.....--+++.|++|.++ .+..+|+++ +.+++..
T Consensus 194 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~ 273 (404)
T PTZ00376 194 TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEA 273 (404)
T ss_pred CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHH
Confidence 5 67788889999999999999987654210 00 00011111011256678999999 458899985 3555433
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD--------EGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~--------~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
.........+.... +. + ...+...++...+.. +.+++..++..+.++.+.+.|++
T Consensus 274 ~~l~~~~~~~~~~~------------~~--~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 336 (404)
T PTZ00376 274 ANVLSQLKLIIRPM------------YS--S---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKA 336 (404)
T ss_pred HHHHHHHHHHHhhh------------cC--C---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22110000000000 00 0 112233333332211 22445556778888899999988
Q ss_pred CCC---CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCC
Q psy12303 385 MPD---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAV 461 (480)
Q Consensus 385 ~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~ 461 (480)
.. ++.. ..|+.+.+.|.-. ..++.++|.++..+++.++ + |+++.. .
T Consensus 337 -~~~~~~~~~-~~p~gg~f~~~~~-------------------~~~~~~~L~~~~~v~v~p~------~--Ris~~~--~ 385 (404)
T PTZ00376 337 -LGSPGDWEH-IINQIGMFSFTGL-------------------TKEQVERLIEKYHIYLLDN------G--RISVAG--L 385 (404)
T ss_pred -cCCCCcccc-cccCceEEEecCC-------------------CHHHHHHHHHhCCEeecCC------C--eEEEec--c
Confidence 42 2443 2566776666311 1245667777743555441 2 999533 6
Q ss_pred CHHHHHHHHHHHHHhhcc
Q psy12303 462 TEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~~ 479 (480)
++++++.++++|++++..
T Consensus 386 ~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 386 TSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred CHHhHHHHHHHHHHHHhc
Confidence 899999999999988754
No 237
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=9e-19 Score=171.12 Aligned_cols=225 Identities=16% Similarity=0.123 Sum_probs=159.9
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g~~ 191 (480)
++.+.++++.|.+. .++++||++|+..++ .+.. ||+ .|+++...|++... .+...|+
T Consensus 56 ~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll~--------------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~G~- 116 (366)
T PRK08247 56 VLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLFR--------------SGD-ELIVSSDLYGGTYRLFEEHWKKWNV- 116 (366)
T ss_pred HHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHhC--------------CCC-EEEEecCCcCcHHHHHHHHhhccCc-
Confidence 34455999999976 588889999887654 3322 556 67777777775433 3444666
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++.. |+++++++++++ +++|++++|+||+|.+.++++|.++|+++|+++++|++|+.+....+
T Consensus 117 --~v~~vd~~-----d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p 183 (366)
T PRK08247 117 --RFVYVNTA-----SLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRP 183 (366)
T ss_pred --eEEEECCC-----CHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCc
Confidence 77777753 899999998765 89999999999999999999999999999999999999976544322
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
... ++|+++.|++|+++++.+ .|+++.+++.+........ .+ .+.....
T Consensus 184 -~~~-------g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~-~~--------------------~g~~~s~ 234 (366)
T PRK08247 184 -LEE-------GADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ-NA--------------------AGAVLSP 234 (366)
T ss_pred -hhc-------CCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHH-Hh--------------------cCCCCCh
Confidence 122 789999999999997543 4655554444433222100 00 0111233
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEe
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWY 404 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~ 404 (480)
...|+.++. .+.+..++++..++++.+.+.|++ +|++..+..| ..++++|.+
T Consensus 235 ~~a~l~~~~--l~tl~~r~~~~~~~a~~l~~~L~~-~p~v~~v~~P~~gg~~sf~~ 287 (366)
T PRK08247 235 FDSWLLIRG--MKTLALRMRQHEENAKAIAAFLNE-QPGVTDVLYPGRGGMLSFRL 287 (366)
T ss_pred HHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHh-CCCeeEEecCCcCcEEEEEE
Confidence 456666554 446677788889999999999999 8998754444 788888864
No 238
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=1.3e-17 Score=165.23 Aligned_cols=305 Identities=13% Similarity=0.057 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE-ecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF-TSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl-~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+.++++.+. +.+++++|||+|+..++++++... ...|. +++..|+ .....|.+...+....+.
T Consensus 73 ~~~~~la~~l~~~~~~--~~v~~~~sGseA~~~al~~ar~~~----~~~G~---~~r~~vi~~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 73 PEQERLAERLVENSFA--DKVFFTNSGAEAVECAIKTARRYH----YGKGH---PERYRIITFEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred hHHHHHHHHHHhhCCC--CEEEEcCCcHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEECCCcCCCcHHHHhccCC
Confidence 3344566777777654 369999999999999999998631 11232 1222444 444555554444433332
Q ss_pred CCCCeEEeeCCCCCC----CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc----cChHHHHHHHHHcCcEEEeecc
Q psy12303 191 GTDNCVEVPSDKRGR----LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF----DPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~----~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~----~~l~~I~~i~~~~~~~l~vD~a 262 (480)
....-.+.|..++.. .|+++++++++++ +++|+++..++++|.+ +.+++|.++|++||+++++|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv 217 (389)
T PRK01278 144 EKYLEGFGPLVPGFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEV 217 (389)
T ss_pred hhhcccCCCCCCCceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 100000012111211 4899999988653 8999999888888844 3599999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|++.......... ...++ ..|.++ +.|.++++++.|+++.++. ..+...... . ..++
T Consensus 218 ~~g~g~~g~~~~~-~~~~~-~pdi~t--~sK~l~~G~~ig~~~~~~~-~~~~~~~~~-----~----------~~t~--- 274 (389)
T PRK01278 218 QCGMGRTGKLFAH-EWAGV-TPDIMA--VAKGIGGGFPLGACLATEE-AAKGMTPGT-----H----------GSTY--- 274 (389)
T ss_pred ccCCCcCCcceee-cccCC-CCCEEE--EehhccCCcceEEEEEcHH-HHhccCCCC-----C----------CCCC---
Confidence 9975432221111 12244 467655 6799987678899887543 332211000 0 0000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
++......++.++++.+-.+ +..++..++.+++.+.|++. .+++.....+....+.+.+. ..
T Consensus 275 ~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~-~~----------- 339 (389)
T PRK01278 275 GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV-VP----------- 339 (389)
T ss_pred CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe-cC-----------
Confidence 11112222333334443222 23344555555555555430 33221111222222222221 10
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.++|+++... + .+++|++ ++..+++++|++++++|++++++|
T Consensus 340 -----~~~~~~~l~~~GV~~~p~----~-~~~lR~~-p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 340 -----NRDLVQALRDEGLLTVGA----G-DNVVRLL-PPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred -----HHHHHHHHHHCCeEEeec----C-CCEEEEe-CCcccCHHHHHHHHHHHHHHHHhC
Confidence 235677888888554332 2 4799999 777789999999999999988764
No 239
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=1.2e-17 Score=161.61 Aligned_cols=270 Identities=14% Similarity=0.093 Sum_probs=180.2
Q ss_pred HHHHHHHHhC---CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 117 VLEKMRQIIG---WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 117 ~~~~la~~~g---~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
+++.+++.++ .++.++++|+|+++++..++.+. + .|++..++|+.+..+++.+|.
T Consensus 61 Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~------------------d-~v~v~~P~y~~~~~~~~~~g~--- 118 (335)
T PRK14808 61 LIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF------------------D-RSVFFPPTYSCYRIFAKAVGA--- 118 (335)
T ss_pred HHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh------------------C-cEEECCCCHHHHHHHHHHcCC---
Confidence 4455555555 77889999999999998888654 2 477788999999999999998
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+++.+|.++++.++... +. .+++|++++|+||||.+.+.+++.+++ ++++++++|++|..+.- ..
T Consensus 119 ~~~~v~~~~~~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~--~~- 183 (335)
T PRK14808 119 KFLEVPLTKDLRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG--ES- 183 (335)
T ss_pred eEEEecCCCcCCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC--Cc-
Confidence 88999998777665332 11 167999999999999999999999998 58999999999987531 11
Q ss_pred cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
..+.+... .--+++.|++|.++ .+..+|+++.. ++.++........+-. +. .....+
T Consensus 184 ~~~~~~~~-~~vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~~l~~~~~~~~~-------------------~~-~~q~a~ 241 (335)
T PRK14808 184 YVDLLKKY-ENLAVIRTFSKAFSLAAQRIGYVVSS-EKFIDAYNRVRLPFNV-------------------SY-VSQMFA 241 (335)
T ss_pred hHHHHHhC-CCEEEEEechhhccCcccceEEEEeC-HHHHHHHHHhcCCCCC-------------------CH-HHHHHH
Confidence 01112211 12356678999999 45789998864 4455443322211100 00 111122
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
..++. ..+.+.+..+...+..+.+.+.|++ . |+++. +|..+.+.+ ..+.. . ..++.++|
T Consensus 242 ~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~-~~~g~f~~~-~l~~~-~--------------~~~~~~~l 300 (335)
T PRK14808 242 KVALD--HREIFEERTKFIVEERERMKSALRE-M-GYRIT-DSRGNFVFI-FMEKE-E--------------KERLLEHL 300 (335)
T ss_pred HHHHh--CHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEC-CCCCeEEEE-eCCCc-c--------------HHHHHHHH
Confidence 22232 2345566667777778889999998 4 78764 565554433 23211 0 13567888
Q ss_pred HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 433 MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.|+.+... ..++|+++. +.++.++++++|++.
T Consensus 301 ~~~Gi~V~~~------~~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 301 RAKNIAVRSF------REGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred HHCCeEEEEC------CCCeEEecC----CHHHHHHHHHHHHhh
Confidence 8888655432 258999943 579999999999754
No 240
>PLN02242 methionine gamma-lyase
Probab=99.82 E-value=5.4e-18 Score=167.46 Aligned_cols=222 Identities=14% Similarity=0.099 Sum_probs=156.4
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|...++|+ .+++++|.+. +++++||++|+..++.++.. ||+ .|+++...|+.....+
T Consensus 74 ~~Pt~~~LE~----~lA~l~g~~~--~l~~~sG~~Ai~~al~al~~--------------~GD-~Vl~~~~~Y~~~~~~~ 132 (418)
T PLN02242 74 FNPTVLNLGR----QMAALEGTEA--AYCTASGMSAISSVLLQLCS--------------SGG-HVVASNTLYGGTHALL 132 (418)
T ss_pred CChhHHHHHH----HHHHHhCCCe--EEEEccHHHHHHHHHHHHhC--------------CCC-EEEEcCCcHHHHHHHH
Confidence 3455555554 4888899876 78999999999999988754 556 7788888877766654
Q ss_pred H-----HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEee
Q psy12303 186 A-----VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVD 260 (480)
Q Consensus 186 ~-----~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD 260 (480)
. ..|+ +++.++.+ |++++++++++. ++++|++++++||+|.+.|+++|.++|+++|+++++|
T Consensus 133 ~~~~~~~~G~---~~~~~d~~-----d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD 199 (418)
T PLN02242 133 AHFLPRKCNI---TTTFVDIT-----DLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD 199 (418)
T ss_pred HHhhhhccCc---eEEEcCCC-----CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE
Confidence 3 2444 56666543 899999988652 2889999999999999999999999999999999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
++|+.+.. ..... ++|+++.|++|+++++.. .|+++ .++..+...........
T Consensus 200 ea~~~~~~--~~~~~-------g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~~--------------- 254 (418)
T PLN02242 200 NTFAPMVL--SPARL-------GADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGAL--------------- 254 (418)
T ss_pred CCCCccCC--CHHHc-------CCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhhh---------------
Confidence 99965432 22223 689999999999987643 35554 55555444322111100
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
...+.......+|..+. +...+..++++..++++++.+.|++ + +++++
T Consensus 255 --~~~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~-~-~~~V~ 302 (418)
T PLN02242 255 --MLLGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKE-L-GLKVI 302 (418)
T ss_pred --hccCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHh-C-CCEEE
Confidence 00111233445555544 4456777888999999999999999 6 56765
No 241
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=5e-18 Score=169.97 Aligned_cols=365 Identities=12% Similarity=0.044 Sum_probs=206.4
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHH-HHHHHhCC---C--CCCeEECCChhHHHHHHHHHHHHhcCchhH
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLE-KMRQIIGW---Q--GGDSILAPGGSISNLYAFLAARHKMFPTYK 158 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~-~la~~~g~---~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~~ 158 (480)
++..+.++..+... .+|...++..++.+++.+ ++.+..+. + +.++++|+|+++|+..++.++....+
T Consensus 114 ~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~l---- 186 (527)
T PRK09275 114 ADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGL---- 186 (527)
T ss_pred CCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhc----
Confidence 34445555555533 247767777777777776 44443332 2 23799999999999999886432110
Q ss_pred hcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCc
Q psy12303 159 EKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTV 236 (480)
Q Consensus 159 ~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~ 236 (480)
..||| .|++..+.++.+...+.+.|.+. .++.++.++ ++.+|+++|++++++. +++|++++|+||
T Consensus 187 -----l~pGD-~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~------tkai~l~nP~NP 253 (527)
T PRK09275 187 -----LKAGD-KIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPS------IKALFLVNPSNP 253 (527)
T ss_pred -----CCCCC-EEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCC------CCEEEEeCCcCC
Confidence 01667 78888999999999988887643 555666543 4789999999877654 899999999999
Q ss_pred cccccC---hHHHHHHHHH--cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCch
Q psy12303 237 LGAFDP---IEEIADICQK--YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDG 310 (480)
Q Consensus 237 ~G~~~~---l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~ 310 (480)
||.+.+ +++|+++|++ +++|+++|++|+.+.. .+.. .......--+++.|++|.++.| ..+|+++..+..
T Consensus 254 TG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s-~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~ 329 (527)
T PRK09275 254 PSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRS-LFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDN 329 (527)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccC-HHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchh
Confidence 999977 7888888965 4999999999987542 1111 1111112246667899999744 778998876542
Q ss_pred hhHhhhcCC---------ccc--ccccccc--cCcc-----cCCCC-ccccCCCCCC-chHHHHHHHHh--cHHHHHHHH
Q psy12303 311 LLISCNQMS---------AEY--LFMQDKL--YDVR-----YDTGD-KVIQCGRHND-IFKLWLQWRAK--GDEGFEKQI 368 (480)
Q Consensus 311 ~~~~~~~~~---------~~~--l~~~~~~--~~~~-----~~~~~-~~~~~~r~~~-~l~~~~~l~~~--g~~~~~~~~ 368 (480)
......... ..| +...... .-.+ ..... .+...+.... +++++.....+ +.+..+++.
T Consensus 330 v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~ 409 (527)
T PRK09275 330 VFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMK 409 (527)
T ss_pred HHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 221111000 000 0000000 0000 00000 0000000000 11111111112 344556666
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh--hhhHHHHHHHHhcccEEEeeeeeC
Q psy12303 369 DRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG--EITPILKGRMMQAGTMMVGYQPLN 446 (480)
Q Consensus 369 ~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~--~~~~~i~~~l~~~g~~~~~~~~~~ 446 (480)
+..++..+.+.+.|.. ++.. .+|..+.++|.-.+.........++...+. .-..++..+|.++..+++.++...
T Consensus 410 ~~~~~Rr~~l~~~Lg~---~~~~-~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~F 485 (527)
T PRK09275 410 DIIRRRYKALYEGLGL---PEPE-DPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGF 485 (527)
T ss_pred HHHHHHHHHHHHHcCC---CCcC-CCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhh
Confidence 7777777777666622 2221 357777777754332100000001111110 012456666666544554444333
Q ss_pred C-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 447 D-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 447 ~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+ ..+++|+|+.+ .+++++....++|++++++
T Consensus 486 g~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 486 GGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred CCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 3 25689999644 4789999999999987753
No 242
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.82 E-value=1.4e-17 Score=162.83 Aligned_cols=291 Identities=10% Similarity=-0.007 Sum_probs=184.6
Q ss_pred chhcChhhHHHHHHHHHHHHHHhC---CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIG---WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g---~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.|....+..++.+++.+++.+..| ++++++++|+|+++++..++.++.-. ||+ .|+++.++|+
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~-------------~gd-~Vl~~~p~y~ 116 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLG-------------PGD-TVVIPELAYP 116 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCC-------------CCC-EEEECCCCcH
Confidence 344445567888888899888765 45689999999999988776654211 556 7889999999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcE
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMW 256 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~ 256 (480)
++...+..+|. +++.++ +++.++. + ++++|++++++||||.+.+ +++|.++|++||++
T Consensus 117 ~~~~~~~~~g~---~~~~v~-------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ 177 (357)
T TIGR03539 117 TYEVGALLAGA---TPVAAD-------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAV 177 (357)
T ss_pred HHHHHHHhcCC---EEeccC-------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeE
Confidence 99988888887 555543 2333321 1 3789999999999999876 66788999999999
Q ss_pred EEeeccccccccccccccCcccC-----CCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLT-----GIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~-----~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
+++|++|+......+... .+. +...-.+++.|++|.++.| ..+|+++ .++...............
T Consensus 178 ii~De~y~~~~~~~~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i-~~~~~~~~~~~~~~~~~~------ 248 (357)
T TIGR03539 178 VASDECYLELGWEGRPVS--ILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVA-GDPALVAELLTVRKHAGL------ 248 (357)
T ss_pred EEEecchhhhccCCCCcc--ceecccCCCccccEEEEeccccccCCCceeEEEEe-cCHHHHHHHHHHHhhccc------
Confidence 999999976443111100 111 0011236677999997544 5678877 445544433211100000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCcc
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
....+...++...+ ....++...++..+.++++.+.|.+ .|+.+ .+|..+.+++...+..
T Consensus 249 ---------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~--~g~~~-~~p~~~~~~~~~~~~~- 309 (357)
T TIGR03539 249 ---------------MVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK--AGFRI-DHSEAGLYLWATRGED- 309 (357)
T ss_pred ---------------CCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH--cCCCC-cCCCccEEEEEECCCC-
Confidence 01122222233333 2344566667777888899999988 47775 4566666665432211
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
..++.+.|.+.|+.+... ...+ ..+++|+++.+ +++++++.++.|
T Consensus 310 ---------------~~~~~~~l~~~gV~v~pg-~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 310 ---------------AWDTVDRLAELGILVAPG-DFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred ---------------HHHHHHHHHhCCEEECCc-cccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 134567777888554433 2222 14799999543 689999988876
No 243
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=4.2e-18 Score=157.30 Aligned_cols=313 Identities=18% Similarity=0.173 Sum_probs=211.8
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC---ch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC---HY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~---h~ 179 (480)
.|.......++|..+.+...++||++..++.- .||+.||+.++.++.+ ||| .|+..+.. |-
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~anVQP-hSGs~AN~av~~All~--------------pGD-timgm~l~~GGHl 126 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYANVQP-HSGSQANQAVYLALLQ--------------PGD-TIMGLDLSHGGHL 126 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCccccCC-CCchHHHHHHHHHHcC--------------CCC-eEecccCCCCCcc
Confidence 45566777899999999999999998766444 4578899999988876 666 66655544 44
Q ss_pred hHHHHHHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
++.......|.- -+++..++| +++.+|.|++++.+++.+ |++|++ |.+..-..-|++++.+||++.|++|.
T Consensus 127 tHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VGA~L~ 198 (413)
T COG0112 127 THGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVGAYLM 198 (413)
T ss_pred cCCCCCCcccee-EEeEecccccccCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhCceEE
Confidence 444344444532 256677788 469999999999998864 898887 66677777899999999999999999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
+|.||-.|.+....+.. .++.+|+++.+.||++.+|.| |++++++.++.........+.+
T Consensus 199 ~DmAHiaGLVA~G~~p~----P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~--------------- 258 (413)
T COG0112 199 VDMAHVAGLIAGGVHPN----PLPHADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGL--------------- 258 (413)
T ss_pred ehHHHHHHHHhcccCCC----CCCccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCcc---------------
Confidence 99999988876666544 233799999999999998764 7777777666555443222211
Q ss_pred ccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhh
Q psy12303 339 KVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 339 ~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~ 416 (480)
+++-.. ...+...+++..-..+++++.++..++++.|.+.|.+ .|+++++.- +...+.....+..+.+
T Consensus 259 ---qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~--~G~~vvsGgTdnHl~lVDl~~~~~~G----- 328 (413)
T COG0112 259 ---QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE--RGFKVVSGGTDNHLVLVDLRSKGLTG----- 328 (413)
T ss_pred ---CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH--cCCeEecCCccceEEEEEcccCCCCH-----
Confidence 111111 1223334454444667889999999999999999999 799998643 3344444333222221
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeee--eeC----CcccEEEEec---ccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQ--PLN----DLPNFFRNII---SSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~--~~~----~~~~~~R~~~---~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++....|.+-|+. +... +++ -.+..+|+.. ......++|++++.+.|.+++..
T Consensus 329 ---------k~ae~~L~~~~It-~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 329 ---------KKAEAALERAGIT-VNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred ---------HHHHHHHHHcCEe-eccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 2233334344432 2111 111 1146789873 23455678999999988887653
No 244
>PRK07505 hypothetical protein; Provisional
Probab=99.82 E-value=1.1e-17 Score=166.32 Aligned_cols=302 Identities=12% Similarity=0.111 Sum_probs=178.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
..+...++++.+++++|. ..+++++|++|+..++..++....+ .| . ..+|+.....|+++........
T Consensus 89 ~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~~~----~~----~-~~vi~~~~~~H~s~~~~~~~~~ 156 (402)
T PRK07505 89 RSQILKDLEEALSELFGA---SVLTFTSCSAAHLGILPLLASGHLT----GG----V-PPHMVFDKNAHASLNILKGICA 156 (402)
T ss_pred hhHHHHHHHHHHHHHhCC---CEEEECChHHHHHHHHHHHHhcccC----CC----C-CCEEEEchhhhHhHHhhhhhhh
Confidence 355667788899999987 3676678889999999876542110 01 1 2266777788998754333222
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc-
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL- 268 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~- 268 (480)
.+ .+++.+|.+ |+++|++++++. +.+++++.|++++|.+.|+++|.++|++||+++++|++|+.+.+
T Consensus 157 ~~-~~v~~~~~~-----d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g 224 (402)
T PRK07505 157 DE-TEVETIDHN-----DLDALEDICKTN------KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYG 224 (402)
T ss_pred cC-CeEEEeCCC-----CHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcC
Confidence 12 267778764 899999988654 67888889999999999999999999999999999999864321
Q ss_pred -ccccccCcccCC--CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 269 -LSKKYRHPRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 269 -~~~~~~~~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
....+.. ...+ ..+..+++.++.|.++++ .|++++.+++..........+|.+.. +.
T Consensus 225 ~~g~~~~~-~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~-----------------~~ 284 (402)
T PRK07505 225 KNGEGYVR-SELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQ-----------------SL 284 (402)
T ss_pred CCCCchHH-HHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCC-----------------CC
Confidence 1111111 1112 123345666899998864 35655555555544332222222111 10
Q ss_pred C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhh
Q psy12303 346 H-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEI 424 (480)
Q Consensus 346 ~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 424 (480)
. ....++..++..+..+.+.+..++..+..+.+.+.+.. + .......+..+. .+.. ..
T Consensus 285 ~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~----~~g~~~~i~~~~-~~~~--------------~~ 343 (402)
T PRK07505 285 NVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E----QSGSFLPIRLIY-IGDE--------------DT 343 (402)
T ss_pred CHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c----CCCCCCCEEEEE-eCCH--------------HH
Confidence 0 12222333343333444444444444444444333322 1 011111111111 1100 01
Q ss_pred hHHHHHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 425 TPILKGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 425 ~~~i~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.++|.++|+++... .... ..+++|++ ++..+|++|++++++.|+++++
T Consensus 344 ~~~~~~~l~~~Gi~v~~~-~~p~~~~~~~~lRi~-~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 344 AIKAAKQLLDRGFYTSPV-FFPVVAKGRAGLRIM-FRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHHHHHHHHCCCeEeee-cCCCCCCCCceEEEe-cCccCCHHHHHHHHHHHHHHHH
Confidence 246778888898665432 2111 13699999 8888999999999999998765
No 245
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=3.1e-18 Score=167.06 Aligned_cols=217 Identities=15% Similarity=0.129 Sum_probs=148.3
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|+. ++++. . .+.+++++|++|+..++.+... ||+ +|+++...|+.....+
T Consensus 49 ~~p~~~~Le~~----lA~l~--~-~~~v~~~sG~~Ai~~~l~all~--------------~Gd-~Vl~~~~~y~~~~~~~ 106 (366)
T PRK07582 49 SNPTWRALEAA----LGELE--G-AEALVFPSGMAAITAVLRALLR--------------PGD-TVVVPADGYYQVRALA 106 (366)
T ss_pred CCccHHHHHHH----HHHHc--C-CCEEEECCHHHHHHHHHHHhcC--------------CCC-EEEEeCCCcHhHHHHH
Confidence 34455555555 66666 2 3577888888998888866543 556 7777777877766544
Q ss_pred H----HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 186 A----VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 186 ~----~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
. ..|+ +++.++.++++ + .+.+ .+++|++++++|++|.+.|+++|.++|+++|++++||+
T Consensus 107 ~~~l~~~G~---~v~~v~~~~~~-------~-~~~~------~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~ 169 (366)
T PRK07582 107 REYLAPLGV---TVREAPTAGMA-------E-AALA------GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDN 169 (366)
T ss_pred HHHHhcCeE---EEEEECCCChH-------H-Hhcc------CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEEC
Confidence 3 3455 78888875321 1 1222 28899999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+|+.+.... ...+ ++|+++.|+|||++++.+ .|+++.++++......... .+.
T Consensus 170 t~~~~~~~~-p~~~-------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~-~~~---------------- 224 (366)
T PRK07582 170 TTATPLGQR-PLEL-------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWR-LLA---------------- 224 (366)
T ss_pred CCCCccccC-chhc-------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHH-HHh----------------
Confidence 986432111 1123 789999999999988766 4777766655444322110 010
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
+-....+.+|..++.+ +.+..++++..+++..+.+.|++ +|.++-+.
T Consensus 225 ----g~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~-~p~v~~v~ 271 (366)
T PRK07582 225 ----GAIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAG-HPAVRGVR 271 (366)
T ss_pred ----CCCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHh-CCCccEEE
Confidence 1112355667666554 45778889999999999999999 88876543
No 246
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=7.7e-18 Score=166.51 Aligned_cols=234 Identities=15% Similarity=0.108 Sum_probs=158.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH----cCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV----CGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~----~g~~ 191 (480)
++.+.++++.|.+. .+++++|+.|+..++.++.. ||+ .|+++...|......+.. .|+
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~all~--------------~Gd-~Vv~~~~~y~~t~~~~~~~l~~~Gi- 134 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNLAG--------------AGD-HIVSSPRLYGGTYNLFHYTLPKLGI- 134 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHhC--------------CCC-EEEEeCCcchHHHHHHHHHhhcCeE-
Confidence 34455889899876 79999999999999877653 556 677777777776554332 344
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++ +. .|+++++++++++ +++|++++++|++|.+.|+++|.++|+++|++++||++++.+....+
T Consensus 135 --~v~~vd-d~---~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~p 202 (436)
T PRK07812 135 --EVSFVE-DP---DDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRP 202 (436)
T ss_pred --EEEEEC-CC---CCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 666664 22 2899999888765 89999999999999999999999999999999999999987655332
Q ss_pred cccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCc--ccCC---------C-C
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV--RYDT---------G-D 338 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~---------~-~ 338 (480)
..+ ++|+++.|+||+++++. ..|++++.+...-... .... .+...+..+.. .... . .
T Consensus 203 -l~~-------GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (436)
T PRK07812 203 -LEH-------GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQ-GRFP-GFTTPDPSYHGVVFAELGPPAYALKARVQ 272 (436)
T ss_pred -hhc-------CCCEEEEecccccCCCCCeEEEEEEcCCcccccc-cccc-ccccCCcccccchhhhcchhHHHHHHHHH
Confidence 234 89999999999998653 2566666443211000 0000 00000000000 0000 0 0
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
+....|.......+|+.++ |.+.+..++++..+++..+.+.|++ +|+++-+
T Consensus 273 ~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~-~p~v~~V 323 (436)
T PRK07812 273 LLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEA-RDEVASV 323 (436)
T ss_pred HHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 0111233456667776654 4678899999999999999999999 8987543
No 247
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=2.4e-17 Score=163.81 Aligned_cols=324 Identities=16% Similarity=0.113 Sum_probs=196.6
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.+. +++++|||+|+..++.++...+.. ..+. .||+ .|+++..+|+++..++...|. ++
T Consensus 67 ~fe~~lA~~~g~~~--~v~~~sGt~al~~aL~al~~~~~~---~~~~--~pGd-~VIv~~~t~~a~~~~v~~~G~---~p 135 (438)
T PRK15407 67 AFEKKLAEFLGVRY--ALLVNSGSSANLLAFSALTSPKLG---DRAL--KPGD-EVITVAAGFPTTVNPIIQNGL---VP 135 (438)
T ss_pred HHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHHhhcccc---ccCC--CCCC-EEEECCCCcHHHHHHHHHcCC---EE
Confidence 34455888888864 899999999999999877432110 0111 2556 889999999999999999888 77
Q ss_pred EEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 196 VEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 196 ~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+.++++ .++.+|+++++++++++ +++|++++. .|...++++|.++|++||+++++|+||+.|.......
T Consensus 136 v~vdvd~~~~~id~~~le~~i~~~------tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~- 205 (438)
T PRK15407 136 VFVDVELPTYNIDASLLEAAVSPK------TKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM- 205 (438)
T ss_pred EEEecCCCcCCcCHHHHHHHcCcC------CeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCee-
Confidence 888887 46889999999998765 889988774 6888899999999999999999999999887654321
Q ss_pred CcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccc-------c-------ccc-cCcccCCC
Q psy12303 275 HPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFM-------Q-------DKL-YDVRYDTG 337 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~-------~-------~~~-~~~~~~~~ 337 (480)
. |. ..|..++|+| |.+.++. .|+++++++++...+.... .+-.. . ... ....+.+.
T Consensus 206 ---~-G~-~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (438)
T PRK15407 206 ---T-GT-FGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRFGWQLGELPFGYD 278 (438)
T ss_pred ---e-ec-cCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHH-HhCccccccccccccccccccccccccccccc
Confidence 1 11 2366566554 6565433 4888888876554332111 00000 0 000 00000000
Q ss_pred C-c-cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe-EEecCC-ceeEEEEEeecCccCCCc
Q psy12303 338 D-K-VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF-YLILEP-EMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 338 ~-~-~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~-~~~~~~-~~~~v~f~~~~~~~~~~~ 413 (480)
. + ....|.++..-.+.+++.....+.+++++++.+++++++.+.|.. +++. .+...+ ......+.| +-.+....
T Consensus 279 ~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~ 356 (438)
T PRK15407 279 HKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLAS-LEDFLILPEATPNSDPSWFGF-PITVKEDA 356 (438)
T ss_pred ccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCcCCCCCeeEEEEE-EEEECCcC
Confidence 0 0 001232233333344443334678899999999999999999998 7753 332212 222211111 11111000
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEe-ee-ee-------------CC--------cccEEEEecccCCCCHHHHHHHH
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVG-YQ-PL-------------ND--------LPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~-~~-~~-------------~~--------~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
. .. ..++.+.|.++|+-... +. +. .+ ....+-+. +++..|++|+++++
T Consensus 357 ~------~~--Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP-~~~~l~~~~v~~i~ 427 (438)
T PRK15407 357 G------FT--RVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIG-VYPGLTEEMLDYVI 427 (438)
T ss_pred C------CC--HHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEec-CCCCCCHHHHHHHH
Confidence 0 00 13566777777753110 00 00 00 01234455 57778999999999
Q ss_pred HHHHHhhc
Q psy12303 471 TEMDRLGH 478 (480)
Q Consensus 471 ~~l~~~~~ 478 (480)
++|+++++
T Consensus 428 ~~i~~~~~ 435 (438)
T PRK15407 428 EKIEEFFG 435 (438)
T ss_pred HHHHHHHh
Confidence 99998764
No 248
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=9e-19 Score=171.46 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g 189 (480)
.+++.+.+++++|.+ .++++++|+.|+..++. ... ||+ +|+++...|.++... +...|
T Consensus 49 ~~~le~~la~l~g~~--~~l~~~sG~~al~~~l~-ll~--------------~Gd-~Vl~~~~~y~~~~~~~~~~~~~~G 110 (378)
T TIGR01329 49 RTALESLLAKLDKAD--RAFAFSSGMAALDVITR-LLN--------------NGD-EIIAGDDLYGGTDRLLTQVVPRSG 110 (378)
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-HhC--------------CCC-EEEEcCCCchHHHHHHHHHHHHcC
Confidence 345667799999985 47778888888766554 322 556 788888888876654 34456
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+ +++.++.+ |+++++++++++ +++|++++++|++|.+.|+++|+++|+++|++++||++++.+...
T Consensus 111 ~---~v~~vd~~-----d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~ 176 (378)
T TIGR01329 111 V---VVVHVDTT-----DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC 176 (378)
T ss_pred c---EEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 6 78888764 899999998754 899999999999999999999999999999999999999766442
Q ss_pred cccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
.+. .+ ++|+++.|+||++++|.+ .|+++++++...+..... ... .|...
T Consensus 177 ~~l-~~-------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~----~~~-----------------~G~~~ 227 (378)
T TIGR01329 177 NPL-EL-------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFL----QNS-----------------TGSGL 227 (378)
T ss_pred Chh-hc-------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHH----HHh-----------------cCCcC
Confidence 222 33 789999999999998766 788887776543332211 000 11112
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
....+|..++ +.+.+..++++..+++..+.+.|++ +|.+.
T Consensus 228 ~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~-~~~v~ 267 (378)
T TIGR01329 228 APFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLST-HPRVK 267 (378)
T ss_pred CHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHh-CCCcc
Confidence 3445555443 4567888899999999999999998 77763
No 249
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.81 E-value=5e-17 Score=161.49 Aligned_cols=306 Identities=15% Similarity=0.105 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC-chhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC-HYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~-h~s~~~~~~~~g 189 (480)
.....++.+.+++++|.+ .+.++++|++||..|+..++.... +.+|.. +|+.+|+..... |.+...++...+
T Consensus 78 ~~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~ai~~a~~~~~---~~~~~~--~~~~~i~~~~~~yhg~~~~~~~~~~ 150 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGYD--KVLPMNTGAEAVETAIKLARKWGY---KVKGIP--ENQAIIVSAKGNFHGRTLGAISMST 150 (401)
T ss_pred CHHHHHHHHHHHhhcCCC--EEEEeCccHHHHHHHHHHHHHHhh---hhcCCC--CCCCEEEEECCCcCcccHHHHhCcC
Confidence 344556677788888864 589999999999999999987421 111211 224466666655 656566665543
Q ss_pred C-------C--CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcE
Q psy12303 190 L-------G--TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMW 256 (480)
Q Consensus 190 ~-------~--~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~ 256 (480)
. + ...+..+|.+ |+++|++++++. +..+.+|+++..++++|.+.| +++|.++|++||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~l 222 (401)
T TIGR01885 151 DPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVL 222 (401)
T ss_pred CcccccccCCCCCCceEeCCC-----CHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1 1 0133444443 789999988643 234788999999999999987 99999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
+++|++|.+.......... ...++ ..|+++++ |.++++ .++|+++.+ +++...... .....
T Consensus 223 li~DEv~~g~g~~G~~~~~-~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i~~~~~~---~~~~~---------- 284 (401)
T TIGR01885 223 LIADEIQTGLGRTGKLLCV-DHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDVMLTIKP---GEHGS---------- 284 (401)
T ss_pred EEEechhhCCCccchhhHH-hhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHHHhhccC---CCCCC----------
Confidence 9999999764322211111 12233 57888754 998865 467877754 444433211 00000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEEEEEeecCccCCCc
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v~f~~~~~~~~~~~ 413 (480)
++ ++.+.....+.++|+.+..+ .+.++..++++++.+.|++ +. ..++. .+...++.+.+.+.. .+
T Consensus 285 ----t~-~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~-l~-~~~~~~~~g~g~~~~i~~~~~~-~~-- 351 (401)
T TIGR01885 285 ----TY-GGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKK-LP-KPIITEVRGRGLLNAIVIDESK-TG-- 351 (401)
T ss_pred ----CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHh-cc-CCceeEEeecCeeEEEEeccCc-ch--
Confidence 00 11122333444455544332 3446778889999999998 53 22222 223333333222111 00
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
. ...++.+.|.++|++ +.+. + .+.+|++ ++..+|++||++++++|++.+
T Consensus 352 -------~--~~~~l~~~l~~~Gv~-v~~~---~-~~~lRi~-p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 352 -------R--TAWDLCLKLKEKGLL-AKPT---H-GNIIRLA-PPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred -------h--HHHHHHHHHHhCCEE-EEec---C-CCEEEEe-CCccCCHHHHHHHHHHHHHHh
Confidence 0 124677888888854 3331 2 4689999 888999999999999998865
No 250
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.81 E-value=1.7e-18 Score=170.77 Aligned_cols=215 Identities=13% Similarity=0.110 Sum_probs=155.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~ 191 (480)
++.+.++++.|.+. .+++++|+.|+..++.+... ||+ .|+++...|.... ..+...|+
T Consensus 69 ~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~ll~--------------~Gd-~Viv~~~~y~~t~~~~~~~~~~~G~- 130 (403)
T PRK07503 69 LLEQRMASLEGGEA--AVALASGMGAITATLWTLLR--------------PGD-EVIVDQTLYGCTFAFLHHGLGEFGV- 130 (403)
T ss_pred HHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHcC--------------CCC-EEEEccCccchHHHHHHHHHhhCCE-
Confidence 34455899999865 67888999998888876532 556 6777777775433 33445566
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++.+ |+++++++++++ |++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....+
T Consensus 131 --~v~~vd~~-----d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~ 197 (403)
T PRK07503 131 --TVRHVDLT-----DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRP 197 (403)
T ss_pred --EEEEeCCC-----CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 77777764 789999998765 88999999999999999999999999999999999999987643211
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
... ++|+++.|++|+++++.+ .|+++ .+++............. .+.....
T Consensus 198 -l~~-------g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~~-------------------~g~~~s~ 249 (403)
T PRK07503 198 -LEL-------GADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKDM-------------------TGAVMSP 249 (403)
T ss_pred -hhh-------CCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHhC-------------------cCCCCCH
Confidence 123 789999999999997543 56555 66655443321100000 1222455
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
+.+|+.++. .+.+..++++..+++..+.+.|++ +|.++.+
T Consensus 250 ~~a~l~l~~--L~tl~~r~~~~~~na~~~a~~L~~-~p~v~~V 289 (403)
T PRK07503 250 FDAFLLMRG--LKTLALRMDRHCASAQAVAEWLAR-HPAVELV 289 (403)
T ss_pred HHHHHHHcC--cchHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 666766654 567788888999999999999999 8887644
No 251
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=1.9e-19 Score=173.37 Aligned_cols=233 Identities=26% Similarity=0.323 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
.-.+..+.+|+.||++. .-++++|+|.+|..++.++.. ||+ .|+++..+|-|+..++.+.|+
T Consensus 67 ~I~eAe~~aA~~fGAd~-t~flvnGsT~g~~a~i~a~~~--------------~gd-~VLv~RN~HkSv~~alil~ga-- 128 (417)
T PF01276_consen 67 IIKEAEELAARAFGADK-TFFLVNGSTSGNQAMIMALCR--------------PGD-KVLVDRNCHKSVYNALILSGA-- 128 (417)
T ss_dssp HHHHHHHHHHHHHTESE-EEEESSHHHHHHHHHHHHHTT--------------TTC-EEEEETT--HHHHHHHHHHTE--
T ss_pred HHHHHHHHHHHhcCCCe-EEEEecCchHHHHHHHHHhcC--------------CCC-EEEEcCCcHHHHHHHHHHcCC--
Confidence 34456678999999986 467788888999999888875 556 899999999999999999998
Q ss_pred CCeEEeeCC-CC----CCCCH-----HHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 193 DNCVEVPSD-KR----GRLIP-----SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 193 ~~v~~v~~~-~~----~~~d~-----~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..++++.. +. +.+++ +.++++|++..... .+++|++++| |..|.+.|+++|+++|+++++.|+||+|
T Consensus 129 -~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 129 -IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp -EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-T
T ss_pred -eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEcc
Confidence 66676553 22 24666 89999998753211 1556999999 6789999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCc-------cceeCccccCCCcccceEEEEeCch-hh-Hhh-------hcCCccccccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERAD-------SVTWNPHKLMGTLLQCSTIHFKQDG-LL-ISC-------NQMSAEYLFMQ 326 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D-------~~~~s~hK~~~~p~~~g~~~~~~~~-~~-~~~-------~~~~~~~l~~~ 326 (480)
||+...+.+..+. . ..+ ++| +++.|.||.+.+-..++++.+++.. .- .+. .+.+|.|+.-
T Consensus 206 hGah~~F~~lp~~-a-~~~-gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm- 281 (417)
T PF01276_consen 206 HGAHFGFHPLPRS-A-LAL-GADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM- 281 (417)
T ss_dssp T-TTGGCSGGGTT-C-SST-TSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH-
T ss_pred ccccccCCCCccc-h-hhc-cCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH-
Confidence 9998776644322 1 122 788 9999999999998899999999875 21 111 1122222210
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCCeEEecCC
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKI---KSMPDKFYLILEP 395 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l---~~~~~g~~~~~~~ 395 (480)
+++.. +.+.+ +.+| +++.++..++++.+++.| .+ +.+++++.+.
T Consensus 282 ---------------------ASlD~--a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~-~~~~~~~~~~ 329 (417)
T PF01276_consen 282 ---------------------ASLDV--ARAQMEEEEG-RELLEEAIELAEEFRKKINRLND-IWGFKVLGPE 329 (417)
T ss_dssp ---------------------HHHHH--HHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCC-T-SSEESS-S
T ss_pred ---------------------HHHHH--HHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCC-CceEecCCcc
Confidence 11221 12223 2333 566777788888888888 56 7888887653
No 252
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=1.2e-17 Score=165.72 Aligned_cols=318 Identities=12% Similarity=0.046 Sum_probs=202.8
Q ss_pred HhHHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCe--EECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 87 SMAGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDS--ILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 87 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~--~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
..+.+.+...... ....|....+..++.+.+.+|+.+.-+. +++++ ++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~--------- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRA--------- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHh---------
Confidence 3445666555432 3335766777788888888887665442 45565 89999999999988655320
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC-C-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS-D-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~-~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
.||+ .|++.+++++.+..+++.+|+ +++.+|. + +++.+|+++++++++.. ..+++++++++++||||.
T Consensus 118 ---~pGd-~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~ 187 (396)
T PRK09257 118 ---FPDA-KVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGA 187 (396)
T ss_pred ---CCCC-eEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCC
Confidence 1656 899999999999999999998 8889987 3 35789999999988742 122567788999999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEeecccccccccccc-ccC-cccCCCCCCccceeCccccCCC-cccceEEEE--eCchh
Q psy12303 240 FDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKK-YRH-PRLTGIERADSVTWNPHKLMGT-LLQCSTIHF--KQDGL 311 (480)
Q Consensus 240 ~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~-~~~-~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~--~~~~~ 311 (480)
+.+ +++|+++|++|++++++|++|......... ... +.+.+...--+++.|++|.++. +..+|++++ .++..
T Consensus 188 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~ 267 (396)
T PRK09257 188 DLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEE 267 (396)
T ss_pred CCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHH
Confidence 966 688889999999999999999876531110 000 0111111113567799999996 688999874 33332
Q ss_pred hH----hhhcC-CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHH
Q psy12303 312 LI----SCNQM-SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G------DEGFEKQIDRLMELAEYM 378 (480)
Q Consensus 312 ~~----~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g------~~~~~~~~~~~~~l~~~l 378 (480)
+. ..... ...+.. ...+...+....+ + .+.+++..++..+.++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l 325 (396)
T PRK09257 268 ADRVLSQLKATIRTNYSN----------------------PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLL 325 (396)
T ss_pred HHHHHHHHHHHhhhhcCC----------------------CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11110 011110 0111111111111 1 234556777888889999
Q ss_pred HHHHhcCCC---CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEe
Q psy12303 379 VKKIKSMPD---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNI 455 (480)
Q Consensus 379 ~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~ 455 (480)
.+.|++ .. ++.+ ..|+.+.++|.-.+ ...+.+.+.+.|+ .+.+ .+ |++
T Consensus 326 ~~~L~~-~~~~~~~~~-~~p~gg~~~w~~l~------------------~~~~~~l~~~~~V-~~~p------~~--ri~ 376 (396)
T PRK09257 326 VEALKA-KGPSRDFDF-IARQRGMFSYSGLT------------------PEQVDRLREEFGV-YAVG------SG--RIN 376 (396)
T ss_pred HHHHHh-cCCCCCccc-ccccceEEEecCCC------------------HHHHHHHHHcCCE-EEcC------CC--eEE
Confidence 999988 42 3554 46777777663211 0122333445564 4333 12 988
Q ss_pred cccCCCCHHHHHHHHHHHHHh
Q psy12303 456 ISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 456 ~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.+ .++++|++++++|+++
T Consensus 377 ~~~--~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 377 VAG--LNESNIDYVAEAIAAV 395 (396)
T ss_pred Eee--CCHHHHHHHHHHHHhh
Confidence 533 6899999999999875
No 253
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.81 E-value=1.9e-17 Score=164.77 Aligned_cols=305 Identities=14% Similarity=0.103 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++.+.+++++|.+ .++|+++||+||..+++.++.... ..+|... .++.+|......|.+....+...+-.
T Consensus 73 ~~~~~~~~~l~~~~~~~--~~~~~~SGs~A~e~al~~~~~~~~---~~~~~~~-~~~~vl~~~~~~Hg~~~~~~~~~~~~ 146 (400)
T PTZ00125 73 DVLGLAEKYITDLFGYD--KVLPMNSGAEAGETALKFARKWGY---EVKGIPE-NQAKIIFCNGNFSGRTIGACSASTDP 146 (400)
T ss_pred HHHHHHHHHHHhCCCCC--EEEEeCCcHHHHHHHHHHHHHHHH---hccCCCC-CCCeEEEECCCcCCccHHHHhhcCCc
Confidence 34556677788887775 589999999999999999975310 1122210 11336667777788777766655421
Q ss_pred CC---------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEE
Q psy12303 192 TD---------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLH 258 (480)
Q Consensus 192 ~~---------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~ 258 (480)
.. .+..++. .|+++|++.++. .++++|+++.+++++|.+.| +++|.++|++||++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli 216 (400)
T PTZ00125 147 KCYNNFGPFVPGFELVDY-----NDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLI 216 (400)
T ss_pred chhccCCCCCCCceEeCC-----CCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 10 1222322 289999998861 23899999999999999887 9999999999999999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
+|++|++.......... ...++ ..|++++ .|++++++ ++|+++.++ +......... ...
T Consensus 217 ~Dev~~g~g~~G~~~~~-~~~~~-~pd~~~~--sK~l~~g~~~ig~v~~~~-~~~~~~~~~~---~~~------------ 276 (400)
T PTZ00125 217 VDEIQTGLGRTGKLLAH-DHEGV-KPDIVLL--GKALSGGLYPISAVLAND-DVMLVIKPGE---HGS------------ 276 (400)
T ss_pred EeccccCCCccchhhHH-HhcCC-CCCEEEE--cccccCCCcCcEEEEEcH-HHHhhccCCC---CCC------------
Confidence 99999764322111111 12333 5688775 49998775 889888754 3433321100 000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEecCCceeEEEEEeecCccCCCc
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP----DKFYLILEPEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~----~g~~~~~~~~~~~v~f~~~~~~~~~~~ 413 (480)
+ + .+.+....++..+++.+..+++ .++..++.+++.+.|++ . +.+..+ .+...++.+.+.+.. ..
T Consensus 277 t--~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~-l~~~~~~~~~~-~~~g~~~~v~~~~~~--~~- 345 (400)
T PTZ00125 277 T--Y-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKE-LLKKSPWVKEI-RGKGLLNAIVFDHSD--GV- 345 (400)
T ss_pred C--C-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHH-HHhcCCCeEEE-ecccEEEEEEEccCc--ch-
Confidence 0 0 1111222223333444322233 34555566666666655 3 222222 233333333332111 00
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...++.+.|.++|++ +.+. + .+++|++ ++..+++++|++++++|++.+++
T Consensus 346 ----------~~~~~~~~l~~~Gv~-v~~~---~-~~~lRi~-~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 346 ----------NAWDLCLKLKENGLL-AKPT---H-DNIIRFA-PPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ----------HHHHHHHHHHHCCeE-Eeec---C-CCEEEEE-CCccCCHHHHHHHHHHHHHHHHH
Confidence 023567788888844 3332 2 4799999 77889999999999999987754
No 254
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.81 E-value=1.1e-17 Score=161.53 Aligned_cols=349 Identities=14% Similarity=0.148 Sum_probs=209.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhc
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKM 153 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~ 153 (480)
-|++..+.+.+....-+.+...... ...|..+|.+.++|+. +++++|++. +++|++||.|...+..+..
T Consensus 39 v~iDLltDsgT~aMs~~q~a~~~~G--De~yag~~s~~~lE~~----va~~~G~~~--av~v~sGT~Al~ll~~l~l--- 107 (450)
T TIGR02618 39 VYIDLLTDSGTNAMSDKQWAGLMMG--DEAYAGSRNFYHLERT----VRELYGFKY--VVPTHQGRGAENLLSQIAI--- 107 (450)
T ss_pred eEEEcccCCCcHHHHHHHHHHhhhc--chhhcCCCcHHHHHHH----HHHHHCCCe--EEEcCCHHHHHHHHHHhCC---
Confidence 4777776666633222223333332 2358888888888877 778889886 9999999999765432111
Q ss_pred CchhHhcCCCccCCceEEEecCCCchhHHHH-HHHcCCCCCCeEEeeCC----------CCCCCCHHHHHHHHHHHHHCC
Q psy12303 154 FPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC-AAVCGLGTDNCVEVPSD----------KRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 154 ~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~-~~~~g~~~~~v~~v~~~----------~~~~~d~~~L~~~i~~~~~~~ 222 (480)
.||+ +| +..+|+....+ ....|. .++-++.+ .+|.+|+++|+++|++...
T Consensus 108 -----------~pGD-eV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-- 168 (450)
T TIGR02618 108 -----------KPGD-YV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-- 168 (450)
T ss_pred -----------CCcC-EE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--
Confidence 1666 55 55788766666 566665 44445333 3589999999999986321
Q ss_pred CccEEEEeccCCCcc-ccc---cChHHHHHHHHHcCcEEEeeccccccc-ccccc----c-cCcc----cCCCCCCccce
Q psy12303 223 DIPFFVNCTSGTTVL-GAF---DPIEEIADICQKYNMWLHVDAAWGGGL-LLSKK----Y-RHPR----LTGIERADSVT 288 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~-G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~-~~~~~----~-~~~~----~~~~~~~D~~~ 288 (480)
.++.+|.++..+|.. |.. .++++|.++|++||+++|.|+|+..+- .+... + ..|. ..-.+.+|+++
T Consensus 169 ~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~ 248 (450)
T TIGR02618 169 DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCT 248 (450)
T ss_pred cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEE
Confidence 124577777777766 677 568999999999999999999998743 22211 1 0001 11234799999
Q ss_pred eCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHH
Q psy12303 289 WNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQI 368 (480)
Q Consensus 289 ~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~ 368 (480)
+|+||..++|. .|++.++++++...+......| .+. ..+| .-.+|.. .++..+|...- -....
T Consensus 249 ~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~-eG~-------~tyG---gla~r~~--~ala~gL~e~~---~~~y~ 311 (450)
T TIGR02618 249 MSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF-EGM-------PSYG---GLAGRDM--EAMAIGIREAV---DYEYI 311 (450)
T ss_pred EeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc-CCc-------cccC---chhhhhH--HHHHHHHHHhh---hHHHH
Confidence 99999999987 4677779988777665443333 110 0011 1011111 12222333211 12556
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-ccc-------EEE
Q psy12303 369 DRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGT-------MMV 440 (480)
Q Consensus 369 ~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~-------~~~ 440 (480)
++....+++|.+.|.+ . |+.++.++..+.+.+... .-+...+..+ +- ...+...|.. .|+ +..
T Consensus 312 ~~r~~~a~~La~~L~~-~-Gvpv~~p~ggh~V~vda~-~~lph~~~~~----~p--~~al~~~ly~~~gir~~e~g~~~~ 382 (450)
T TIGR02618 312 EHRVKQVRYLGDKLKA-A-GVPIVEPVGGHAVFLDAR-RFLPHIPQDQ----FP--AQSLAASIYVETGVRSMERGIVSA 382 (450)
T ss_pred HHHHHHHHHHHHHHHH-C-CCcccCCCCcceEEEEhH-HhCCCCChhh----Ch--HHHHHHHHHHHhCccEEeecceec
Confidence 7777789999999999 4 999875555544444221 1000111111 10 1223333332 332 211
Q ss_pred eeeeeCCc-----ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 441 GYQPLNDL-----PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 441 ~~~~~~~~-----~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
...+..+. -..+|++++-..-|.+++|+++++|..+.+
T Consensus 383 ~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 383 GRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred ccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 11111111 257999988888899999999999988765
No 255
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.81 E-value=1.9e-17 Score=162.91 Aligned_cols=306 Identities=15% Similarity=0.066 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+++++..+. ..++|++|||+||..|++.++... .++. +| +..|......|.+...++...|
T Consensus 77 ~~~~~~la~~l~~~~~~--~~v~f~~SGseA~e~Aik~ar~~~-----~~~~---~~r~~ii~~~~~yHG~t~~~~~~s~ 146 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCF--DKVFFANSGAEANEGAIKLARKWG-----RKHK---NGAYEIITFDHSFHGRTLATMSASG 146 (395)
T ss_pred CHHHHHHHHHHhhccCC--CEEEEeCCcHHHHHHHHHHHHHHh-----hccC---CCCcEEEEECCCcCCChHHHHhhcC
Confidence 56677777888776544 359999999999999999998631 1111 12 3356666678888888877766
Q ss_pred CCCCCeEEeeCCCCC----CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEeec
Q psy12303 190 LGTDNCVEVPSDKRG----RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~----~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~ 261 (480)
.......+.|...+. .-|++++++.+++. +++|+++..+...|.+.| +++|.++|++||+++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DE 220 (395)
T PRK03715 147 KPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDE 220 (395)
T ss_pred CcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 421111111211111 13788888888643 889999999999998877 9999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+|+++......+.. ...++ .+|++++ .|.++++++.|.++.+++ ... . ...... +++
T Consensus 221 v~tG~GRtG~~~a~-~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~-i~~-~---~~~~~~------------~T~-- 277 (395)
T PRK03715 221 VQTGCGRTGTLFAY-ELSGI-EPDIMTL--GKGIGGGVPLAALLAKAE-VAV-F---EAGDQG------------GTY-- 277 (395)
T ss_pred cccCCCCCcchhhH-hhcCC-CCceeee--hhhhhCCcceEEEEEccc-ccc-c---cCCCcC------------CCC--
Confidence 99975443333222 23355 5898775 599988788888887654 221 0 111100 011
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccCCCchhhHH
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
.+.+....++.++|..+.. .+..++..++.++|.+.|++ + .++.-+ .-.+.++.+.+... ..
T Consensus 278 -~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~i~~v-rG~Glm~~i~l~~~---------~~ 342 (395)
T PRK03715 278 -NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLE-LSEERGLEGE-RGEGLLRALLLGKD---------IG 342 (395)
T ss_pred -CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-HhhcCCcCeE-EcceeEEEEEecCc---------hH
Confidence 1222233344455555422 34667888888888888875 2 233222 12233333332110 00
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..+ .+....+.++|.++... + .+.+|++ ++..+|++||+++++.|++.++++
T Consensus 343 ~~~----~~~~~~~~~~Gi~~~~~----~-~~~lR~~-p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 343 PQI----VEKARDMQPDGLLLNAP----R-PNLLRFM-PALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HHH----HHHHHhccCCCEEEeec----C-CCEEEEe-CCcccCHHHHHHHHHHHHHHHHhh
Confidence 001 11222333447443221 2 3689999 999999999999999999987653
No 256
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.2e-17 Score=163.92 Aligned_cols=234 Identities=17% Similarity=0.137 Sum_probs=161.2
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g~~ 191 (480)
++.+.++++.|.+. .+++++|+.|+..++.++.. ||+ .|+++...|.+.... +...|+
T Consensus 67 ~le~~lA~l~g~~~--al~~~SG~~Ai~~al~all~--------------pGd-~VIv~~~~y~~t~~~~~~~~~~~G~- 128 (427)
T PRK05994 67 VLEERVAALEGGTA--ALAVASGHAAQFLVFHTLLQ--------------PGD-EFIAARKLYGGSINQFGHAFKSFGW- 128 (427)
T ss_pred HHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHhC--------------CCC-EEEEecCcchhHHHHHHHHHHhcCc-
Confidence 34455888888875 88999999999999887754 556 777887888765443 455566
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++++.+...-
T Consensus 129 --~v~~vd~~-----d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~- 194 (427)
T PRK05994 129 --QVRWADAD-----DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIR- 194 (427)
T ss_pred --EEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 77777754 889999988764 8999999999999999999999999999999999999998765432
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhhHhhhcCCcccccccccccCc--cc-CCC----------
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV--RY-DTG---------- 337 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~-~~~---------- 337 (480)
...+ ++|+++.|+||+++++.+ .|++++...... -......+++...+..... .. +.+
T Consensus 195 pl~~-------gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
T PRK05994 195 PIEH-------GADIVVHSLTKFLGGHGNSMGGIIVDGGTFD-WSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARV 266 (427)
T ss_pred cccc-------CCcEEEEcCccccCCCCCcEEEEEEeCCccc-cccccccccccCCcchhhhhhHHHHhhhhhhHHHHHH
Confidence 2234 899999999999997653 566665422110 0000011111110000000 00 000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
......|...+...+|+.++. .+.+..++++..+++..+.+.|++ +|++.-+
T Consensus 267 ~~~~~~G~~~~~~~A~l~~~~--l~tL~~r~~~~~~~a~~la~~L~~-~p~v~~v 318 (427)
T PRK05994 267 LGLRDLGPAISPFNAFLILTG--IETLPLRMQRHSDNALAVAEWLKG-HPKVSWV 318 (427)
T ss_pred HHHHhcCCCCCHHHHHHHHcC--cccHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 000112334566777776654 677889999999999999999999 8987643
No 257
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.80 E-value=4.7e-18 Score=167.41 Aligned_cols=221 Identities=14% Similarity=0.115 Sum_probs=159.9
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH----
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV---- 181 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~---- 181 (480)
..|....+| +.++++.|.+ ..+++++|+.|+..++.+... ||+ +|+++...|...
T Consensus 68 ~~p~~~~le----~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~--------------~Gd-~Vl~~~~~~~~t~~~~ 126 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAE--ACFATASGMSAVFTALGALLG--------------AGD-RLVAARSLFGSCFVVC 126 (403)
T ss_pred CCchHHHHH----HHHHHHhCCC--cEEEECChHHHHHHHHHHHhC--------------CCC-EEEEccCCcchHHHHH
Confidence 445544555 4588888976 489999999999988877643 556 677777555333
Q ss_pred HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 182 RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 182 ~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
...+...|+ ++++++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|+
T Consensus 127 ~~~~~~~G~---~v~~vd~~-----d~~~l~~ai~~~------tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~ 192 (403)
T PRK07810 127 NEILPRWGV---ETVFVDGE-----DLSQWEEALSVP------TQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDN 192 (403)
T ss_pred HHHHHHcCc---EEEEECCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 344555666 77888753 899999999875 8999999999999999999999999999999999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+|+.+....+ ... ++|+++.|++|+++++.. .|+++.+ +..+.... ..+...
T Consensus 193 a~a~~~~~~~-~~~-------gaDivv~S~tK~l~g~g~~~gG~v~~~-~~~~~~~l---~~~~~~-------------- 246 (403)
T PRK07810 193 VFATPLLQRG-LPL-------GADVVVYSGTKHIDGQGRVLGGAILGD-REYIDGPV---QKLMRH-------------- 246 (403)
T ss_pred CCCccccCCh-hhc-------CCcEEEccCCceecCCcCceeEEEEeC-hHHHHHHH---HHHHHH--------------
Confidence 9987654322 133 789999999999986432 3555544 43332110 011100
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.+.......+|+.++. .+.+..++++..+++..+.+.|++ +|.+.-+.
T Consensus 247 ---~g~~~s~~~a~l~l~~--L~tl~~R~~~~~~~a~~~a~~L~~-~p~v~~V~ 294 (403)
T PRK07810 247 ---TGPALSAFNAWVLLKG--LETLALRVRHSNASALRIAEFLEG-HPAVRWVR 294 (403)
T ss_pred ---hCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHhc-CCCccEEE
Confidence 1122455677776654 677899999999999999999999 88876443
No 258
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.80 E-value=4e-17 Score=163.24 Aligned_cols=333 Identities=10% Similarity=0.029 Sum_probs=193.9
Q ss_pred HhHHHHHHHHcCcC-----CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHh
Q psy12303 87 SMAGEWLIATANTN-----MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKE 159 (480)
Q Consensus 87 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~ 159 (480)
....+.+...++.. ...|....+..++.+.+.+++.+..|. +++++++|+|+++|+..++.+..+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~------- 120 (416)
T PRK09440 48 DYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGR------- 120 (416)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhcc-------
Confidence 34445555544332 134554455678888888888887774 6678999999999999888877531
Q ss_pred cCCCccCCceEEEe-cCCCchhHHHHHHHcCC-CCCCeEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 160 KGLSAIKGQLVMFT-SDQCHYSVRSCAAVCGL-GTDNCVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 160 ~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g~-~~~~v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
+ ...||+ .|++ ..++++.+...+...+. .......++++. ++.+|+++|+ +.+ +++++++++++
T Consensus 121 -~-~~~~gd-~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~ 189 (416)
T PRK09440 121 -R-ADGSLK-KILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSRPT 189 (416)
T ss_pred -c-cCCCCC-eEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEecCC
Confidence 0 001445 6777 57888887776654442 101122233333 3578998887 222 27899999999
Q ss_pred CccccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchh
Q psy12303 235 TVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGL 311 (480)
Q Consensus 235 ~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~ 311 (480)
||||.+.+ +++|.++|++|++++++|++|+...... .+.. .......--+++.|++|++..+..+|+++. ++.+
T Consensus 190 NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~-~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~l 266 (416)
T PRK09440 190 NPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSE-ATPLWNPNIILCMSLSKLGLPGVRCGIVIA-DEEI 266 (416)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhh-cCccccCCeEEEecccccCCCcceEEEEeC-CHHH
Confidence 99999977 6788889999999999999997432110 0000 001111122556799998665578998875 4454
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHH----H-HHHHHHHHHHHHHHHHhcCC
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFE----K-QIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~----~-~~~~~~~l~~~l~~~l~~~~ 386 (480)
++........+... ...+...++...+....+. + +.+...+..+.+.+.|.+++
T Consensus 267 ~~~~~~~~~~~~~~---------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l 325 (416)
T PRK09440 267 IEALSNMNGIISLA---------------------PGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYL 325 (416)
T ss_pred HHHHHHHHHHhccC---------------------CCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44332111111000 1233333333333211121 2 23334455566666666522
Q ss_pred C--CeEEecCCceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-Cc-------ccEEEEe
Q psy12303 387 D--KFYLILEPEMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-DL-------PNFFRNI 455 (480)
Q Consensus 387 ~--g~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-~~-------~~~~R~~ 455 (480)
+ ++.+ ..|+.+.++|...+. ... ..++.+.+.+.|+.+.....+. +. .+++|++
T Consensus 326 ~~~~~~~-~~p~gg~fiw~~~~~~~~~--------------~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis 390 (416)
T PRK09440 326 PDEPCLI-HKPEGAIFLWLWFKDLPIT--------------TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMN 390 (416)
T ss_pred ccCCeEE-ecCCCceEEEEECCCCCCC--------------HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEE
Confidence 2 3554 357666666644432 111 1345566777775544322221 10 2589999
Q ss_pred cccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 456 ISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 456 ~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+. .++++++.++++|+++++.
T Consensus 391 ~~---~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 391 YV---QDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred ec---CCHHHHHHHHHHHHHHHHH
Confidence 54 2689999999999887653
No 259
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.2e-16 Score=159.32 Aligned_cols=318 Identities=12% Similarity=0.053 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
++...++.+.++++++-.-..+.|+++||+|+..|++.+|... ..+|. +|+. +|......|.....+....+
T Consensus 84 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~----~~~~~---~~r~~ii~~~~~yHG~t~~~ls~~~ 156 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYW----RNRGE---PGRSRFLSLRGGYHGDTIGTMSVGD 156 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEEcCCcCCccHHHHhcCC
Confidence 3455567788888874222469999999999999999998741 11121 2232 44455556665545444333
Q ss_pred CCC---------CCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC----hHHHHHHHHHc
Q psy12303 190 LGT---------DNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP----IEEIADICQKY 253 (480)
Q Consensus 190 ~~~---------~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~----l~~I~~i~~~~ 253 (480)
-.. ..+..+|...+ ...+++++++.+++. +..+++|+++. .+...|...+ +++|.++|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~ 233 (423)
T PRK05964 157 RGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH 233 (423)
T ss_pred CccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc
Confidence 210 12333443321 111267777777632 23477888877 4777787654 99999999999
Q ss_pred CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC--Cccccccccccc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM--SAEYLFMQDKLY 330 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~--~~~~l~~~~~~~ 330 (480)
|+++++|++|.+.......+.. ...++ .+|++++ .|+++++ .+.|+++. +++..+..... ...++..
T Consensus 234 g~llI~DEv~tg~gr~G~~~a~-~~~~v-~pDi~~~--~K~l~gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~----- 303 (423)
T PRK05964 234 GVLLIFDEIATGFGRTGTLFAC-EQAGV-SPDIMCL--SKGLTGGYLPLAATLC-TAEIFEAFYSDDRAKAFMHS----- 303 (423)
T ss_pred CCEEEEechhhCCCcCcchhHH-HhcCC-CCCeeee--ehhhhcCcccceEEEE-cHHHHHhhhcCCcccccccC-----
Confidence 9999999999765433222111 22344 5788774 5999877 57888775 44444432211 0001100
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEEEEEeecCc
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNVSFWYLPTR 408 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v~f~~~~~~ 408 (480)
+++ .+......++.++++.+.. ....++..++.+++.+.|++ ..++..+. ...+.++.+.+....
T Consensus 304 ------~T~---~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~-l~~~~~i~~vrg~Gl~~~i~l~~~~ 370 (423)
T PRK05964 304 ------PSY---TANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEP-FRDLPGVADVRVLGAIGAVELDRPV 370 (423)
T ss_pred ------CCC---CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHh-hccCCCeEEeecccEEEEEEeccCc
Confidence 000 1111222333334443322 34567888888888888876 43332222 122333444432111
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
. . .....+.+.|.++|.++ .+. .+.+|++ ++..+|++|||++++++++.+++|
T Consensus 371 -~----~-------~~~~~l~~~l~~~Gv~v-~~~-----~~~lR~~-p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 371 -L----E-------RDGPALRAFALERGVLL-RPL-----GNTIYLM-PPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred -c----h-------hHHHHHHHHHHHCCeEE-Eec-----CCEEEEe-CCcccCHHHHHHHHHHHHHHHhhC
Confidence 0 0 01246778888898544 331 2589999 999999999999999999998875
No 260
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=5.7e-17 Score=160.01 Aligned_cols=291 Identities=14% Similarity=0.127 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.+++.++.+++++..+.+ .++++++|++||..|++.++.. .|. +.+|......|.+....+...+.
T Consensus 70 ~~~~~~la~~l~~~~~~~--~~~~~~sG~~a~~~A~~~a~~~-------~g~-----~~vi~~~~~~Hg~~~~~~~~~~~ 135 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD--LVFFCNSGAEANEAALKLARKH-------TGK-----SKIVTFEQSFHGRTFGTMSATGQ 135 (377)
T ss_pred CHHHHHHHHHHHhcCCCC--EEEEeCCcHHHHHHHHHHHHHh-------cCC-----CeEEEECCCcCCCcHHhhhccCC
Confidence 567777778888776643 5999999999999999988753 111 32555556677776666655442
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
.. ..+..+|.+ |+++|++.+++. +++|+++..+++.|.+.+ +++|.++|++||+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~l 204 (377)
T PRK02936 136 EKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALL 204 (377)
T ss_pred ccccccCCCCCCCceEeCCC-----CHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 11 022333333 788999888654 889999999988887643 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|.+.......... ...++ ..|+++ +.|.++++++.|+++.+ +++....... .. . .
T Consensus 205 I~DEv~~g~g~~g~~~~~-~~~~~-~~di~t--~sK~l~~G~~ig~v~~~-~~~~~~~~~~---~~-~-----------~ 264 (377)
T PRK02936 205 IIDEVQTGIGRTGTLFAY-EQFGL-DPDIVT--VAKGLGNGIPVGAMIGK-KELGTAFGPG---SH-G-----------S 264 (377)
T ss_pred EEeccccCCCcCchhhHH-HhhCC-CCcEEE--EcccccCCCccEEEEEc-HHHHhhccCC---CC-C-----------C
Confidence 999999764332211111 11233 457655 78999976778887754 4443322110 00 0 0
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
++ ++.+....++.++++.+. .++..++..++.+++.+.|++. .+.+..+ .+...++.+.+. ..
T Consensus 265 --t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~-~~------ 330 (377)
T PRK02936 265 --TF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECT-EE------ 330 (377)
T ss_pred --CC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEec-ch------
Confidence 00 111122223333333321 1344456666666666666541 2333222 122323333221 10
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
...+.+.|.++|+++... + .+++|++ ++..+++++|++++++|+++
T Consensus 331 ----------~~~~~~~l~~~gv~v~~~----g-~~~lRi~-p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 331 ----------VAPVIEQLREEGLLVLSA----G-PNVIRLL-PPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ----------HHHHHHHHHHCCeEEecC----C-CCEEEEE-CCcccCHHHHHHHHHHHHHh
Confidence 135667788888554332 2 4699999 87889999999999999875
No 261
>KOG1360|consensus
Probab=99.80 E-value=2.1e-17 Score=151.58 Aligned_cols=299 Identities=14% Similarity=0.137 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
...+|.+ ||++-+-+. ..+.++.--||-..|..+... .| +.+|+..+..|.|.....+..+
T Consensus 218 hv~LE~e----LA~LHqK~a--ALlFsSCfVANDstLftLak~------------lp-gcei~SD~gNHASMI~GIrns~ 278 (570)
T KOG1360|consen 218 HVRLEAE----LADLHQKEA--ALLFSSCFVANDSTLFTLAKK------------LP-GCEIFSDEGNHASMIQGIRNSR 278 (570)
T ss_pred hhhHHHH----HHHHhcCcc--eeeeeeeeeccchHHHHHHHH------------CC-CcEEeccccchHHHHHHhhhcC
Confidence 3455555 888877654 555566666777676665443 15 4589999999999999999888
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+. + .....+ |+++|++.++... ...|++|.+....++.|++.||+||++++++||+...+|++|+.|.+-
T Consensus 279 v~--K-~IFrHN-----D~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG 348 (570)
T KOG1360|consen 279 VP--K-HIFRHN-----DLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYG 348 (570)
T ss_pred Cc--c-eeeccC-----CHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhcccc
Confidence 73 3 233444 9999999998642 245899999999999999999999999999999999999999988652
Q ss_pred cccccCcccCC-CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 270 SKKYRHPRLTG-IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 270 ~~~~~~~~~~~-~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
......-..+| +..+|+++..+.|.+|+ .|..+...+.+.+-..+..+++++.+...+ .-
T Consensus 349 ~rGaGvgerdGvm~kvDiIsGTLgKafGc---VGGYIAat~~LvDmiRSyAaGFIFTTSLPP----------------~v 409 (570)
T KOG1360|consen 349 PRGAGVGERDGVMHKVDIISGTLGKAFGC---VGGYIAATRKLVDMIRSYAAGFIFTTSLPP----------------MV 409 (570)
T ss_pred CCCCCccccCCcchhhhhcccchhhhccc---ccceehhhhhHHHHHHHhcCceEEecCCCh----------------HH
Confidence 21110001122 34789999999999987 566666677676666666778876643211 01
Q ss_pred chHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
...+..+.+.+ +.+| +.+.+.++++.+++++.|.+ .|+.++..|. .++-.+. .+. . + +.+
T Consensus 410 l~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~--~GiPVi~~pS-HIiPv~v-----gda---~----l---~~~ 470 (570)
T KOG1360|consen 410 LAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLME--LGIPVIPNPS-HIIPVRV-----GDA---A----L---AKQ 470 (570)
T ss_pred HHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHH--cCCcccCCCc-ceeeeec-----cCH---H----H---HHH
Confidence 11233333333 3455 45666778899999999999 7999876554 3333321 110 0 1 356
Q ss_pred HHHHHHhcccEEEe----eeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 428 LKGRMMQAGTMMVG----YQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 428 i~~~l~~~g~~~~~----~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.|+.+..+++. ++...| ..-+|+. +.+.+|++-++.+++.+..+-
T Consensus 471 ~sd~Li~~h~iYvQaINyPTV~rG-~E~LRia-PTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 471 ASDILISKHNIYVQAINYPTVARG-TERLRIA-PTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred HHHHHHHhcCeEEEeccCCccccc-ceeeecC-CCCCCCHHHHHHHHHHHHHHH
Confidence 66777777767664 334445 5789999 999999999999999988654
No 262
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=2.8e-17 Score=160.87 Aligned_cols=213 Identities=17% Similarity=0.127 Sum_probs=144.8
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC----chhHHHHHHHcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC----HYSVRSCAAVCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~----h~s~~~~~~~~g~~ 191 (480)
++++.++++.|.+. .+++++|++|+..++.+... ||+ .|+++... +..+...++..|+
T Consensus 49 ~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al~~--------------~Gd-~Vl~~~~~~~~ty~~~~~~~~~~G~- 110 (376)
T PRK06460 49 ELTKKIVELENAEM--GVAFSSGMGAISTTALALLK--------------PGN-SVLVHRDMFGRSYRFFTDYLKNWGV- 110 (376)
T ss_pred HHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEecCCcCcHHHHHHHHHHhhCc-
Confidence 34455889999865 45557778888888876643 556 66666543 3334466677777
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++..++.+ +.+.+++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+.. ..
T Consensus 111 --~v~~~~~~-----~~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-~~ 176 (376)
T PRK06460 111 --NVDASNPG-----SDNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-QK 176 (376)
T ss_pred --EEEEECCC-----CHHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-CC
Confidence 67777764 22334443332 389999999999999999999999999999999999999986532 11
Q ss_pred cccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.... ++|+++.|++|+++++.+ .|+++ .++++..........+ +....+
T Consensus 177 ~l~~-------~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~~~l~~~~~~~---------------------g~~~~~ 227 (376)
T PRK06460 177 PLEL-------GADIVVHSASKFLAGHNDVIAGLAA-GYGKLLNVIDQMRRTL---------------------GTSLDP 227 (376)
T ss_pred hhhc-------CCCEEEeecceeccCCCCceEEEEe-cCHHHHHHHHHHHHhc---------------------CCCCCH
Confidence 1112 679999999999875432 56554 5555544332111111 000223
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..+|..++ |.+.++.++++..++++++.+.|++ +|.+.-+
T Consensus 228 ~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~-~p~v~~v 267 (376)
T PRK06460 228 HAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEG-HPKVVKV 267 (376)
T ss_pred HHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHc-CCCccEE
Confidence 45555554 4678889999999999999999999 7877543
No 263
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=9.9e-17 Score=159.53 Aligned_cols=304 Identities=13% Similarity=0.089 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++.++++++.|.+ .+++++||++|+..++++++... +....+.+..+......|.....+....+.
T Consensus 80 ~~~~~~la~~l~~~~~~~--~v~~~~gg~eA~~~al~~a~~~~-------~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 150 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD--KVFFCNSGAEANEAAIKLARKYG-------HKKGIEKPEIITAENSFHGRTLATLSATGQ 150 (396)
T ss_pred CHHHHHHHHHHHhhcCCC--EEEECCCcHHHHHHHHHHHHHHh-------cccCCCCCeEEEECCCcCcccHHHHHhcCC
Confidence 466677888898887764 69999999999999999987641 111111132444555556554444444332
Q ss_pred CCCCeEEeeCCCCC----CCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc-cc---ChHHHHHHHHHcCcEEEeecc
Q psy12303 191 GTDNCVEVPSDKRG----RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA-FD---PIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 191 ~~~~v~~v~~~~~~----~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~-~~---~l~~I~~i~~~~~~~l~vD~a 262 (480)
........+...+. .-|+++|++++.++ +++|+++.+++++|. +. .+++|.++|++||+++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~ 224 (396)
T PRK02627 151 PKYQEGFEPLVEGFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEV 224 (396)
T ss_pred ccccccCCCCCCCceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 10000111221111 12889999988543 889999999999984 32 389999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|++.......... ...++ ..|+++ +.|.++++.+.|+++.++ .......... .. .++
T Consensus 225 ~~g~g~~g~~~~~-~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~-~~~~~~~~~~-----~~----------~t~--- 281 (396)
T PRK02627 225 QTGMGRTGKLFAY-QHYGI-EPDIMT--LAKGLGGGVPIGAVLAKE-KVADVFTPGD-----HG----------STF--- 281 (396)
T ss_pred hcCCCccCceeee-hhcCC-CCCEEE--EcchhhCCcccEEEEEcH-HHHhccCCCC-----CC----------CCC---
Confidence 9965332211111 12233 457665 669999778899988653 3333221100 00 000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
++......++..+++.+.. ++..++..++.+++.+.|.+. .+.+..+ ......+.+.+ +..
T Consensus 282 ~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~-~~~----------- 345 (396)
T PRK02627 282 GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIEL-DRP----------- 345 (396)
T ss_pred CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEe-cCc-----------
Confidence 1111122223333333222 234455555666666655440 2333222 22233333432 110
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.+.++|+++... + .+++|++ ++...++++|++++++|++++++
T Consensus 346 -----~~~~~~~l~~~Gv~v~~~----~-~~~lRi~-~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 346 -----AAEIVKKALEKGLLINVT----G-DNVLRLL-PPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred -----HHHHHHHHHHCCeEEeec----C-CCEEEEE-CCcccCHHHHHHHHHHHHHHHHh
Confidence 245778888888544332 2 3689999 77788999999999999998765
No 264
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=4.9e-18 Score=162.95 Aligned_cols=306 Identities=19% Similarity=0.241 Sum_probs=183.7
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCC---eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC---c
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGD---SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC---H 178 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~---~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~---h 178 (480)
.......++|.-..+.++++||+++.. -+=.-||+.||+.++.++.+ ||| .|+.-+.. |
T Consensus 59 ~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~--------------pGD-~Im~l~l~~GGH 123 (399)
T PF00464_consen 59 GGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK--------------PGD-TIMGLSLPHGGH 123 (399)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------------TT--EEEEEEGGGT--
T ss_pred cCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh--------------hcC-cEEecChhhccc
Confidence 344566789999999999999997422 23455788999999988875 667 44444333 5
Q ss_pred hhHHHHHHH-----cCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH
Q psy12303 179 YSVRSCAAV-----CGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK 252 (480)
Q Consensus 179 ~s~~~~~~~-----~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~ 252 (480)
.|+...... .|... +++..++| +++.+|.+++++.+++.+ |++|++ |.+..-...|++++.+||++
T Consensus 124 lshg~~~~~~~~~~~~~~~-~~~~y~~d~~~~~ID~d~l~~~a~~~k-----PklIi~--G~S~y~~~~d~~~~reIad~ 195 (399)
T PF00464_consen 124 LSHGSSVNFKKISASGLYF-ESVPYPVDPDTGLIDYDELEKLAKEHK-----PKLIIC--GASSYPRPIDFKRFREIADE 195 (399)
T ss_dssp GGGT-TTSHSBSSHHHHHS-EEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEE--E-SSTSS---HHHHHHHHHH
T ss_pred ccccccccccccccccceE-EEEeeeeecCCCeECHHHHHHHHhhcC-----CCEEEE--CchhccCccCHHHHHHHHHh
Confidence 554443333 22211 56777888 578999999999998864 889888 33444556789999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEe-------------CchhhHhhhcCC
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK-------------QDGLLISCNQMS 319 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~-------------~~~~~~~~~~~~ 319 (480)
.|+++++|.+|-.|.+....+..| + +.+|+++++.||.+.+|. .|+++++ +.++.+......
T Consensus 196 vga~l~~D~sH~~GLIa~g~~~~P-~---~~ADvvt~sThKtl~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av 270 (399)
T PF00464_consen 196 VGAYLMADISHIAGLIAGGLFPNP-F---PYADVVTGSTHKTLRGPR-GGIILTNKGSKNVDKKGKEIDEELAEKIDSAV 270 (399)
T ss_dssp TT-EEEEE-TTTHHHHHTTSS--G-C---CTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH
T ss_pred cCcEEEecccccccceehheecCc-c---ccceEEEeeccccccccC-ceEEEEcCCccccCCcccccHHHHHHHhcccc
Confidence 999999999999998877665552 2 368999999999999876 4888877 233333322111
Q ss_pred cccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-Cce
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEM 397 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~ 397 (480)
-+.+ +++-.. ...++..+++......+.++.++..++++.|.+.|.+ .|+.++.. .+.
T Consensus 271 fP~~------------------qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~--~G~~v~~ggTd~ 330 (399)
T PF00464_consen 271 FPGL------------------QGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE--RGFKVVTGGTDN 330 (399)
T ss_dssp TTTT-------------------SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TT-EEGGGS-SS
T ss_pred CCCc------------------ccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh--CCcEEEECCCCC
Confidence 1111 111111 2334445555544456789999999999999999999 79999853 344
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-----cccEEEEec---ccCCCCHHHHHHH
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-----LPNFFRNII---SSAAVTEGDIDFL 469 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-----~~~~~R~~~---~~~~~t~~di~~~ 469 (480)
..+.+...+..+. ..+..++|.+.| +.+.....++ ....+|+.. ......++|++++
T Consensus 331 H~vlvd~~~~~~~--------------g~~a~~~Le~~g-I~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~i 395 (399)
T PF00464_consen 331 HQVLVDLRSFGID--------------GKEAEKALEEAG-IIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEI 395 (399)
T ss_dssp SEEEEEGGGGTS---------------HHHHHHHHHHTT-EE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHH
T ss_pred CeEEEEecccccc--------------hHHHHHHHHhcC-eeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHH
Confidence 4555543222211 234556666777 4444332222 146899983 2345678888887
Q ss_pred HHHH
Q psy12303 470 LTEM 473 (480)
Q Consensus 470 ~~~l 473 (480)
.+.|
T Consensus 396 A~~I 399 (399)
T PF00464_consen 396 AELI 399 (399)
T ss_dssp HHHH
T ss_pred HhhC
Confidence 7654
No 265
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.80 E-value=9.4e-17 Score=158.75 Aligned_cols=299 Identities=13% Similarity=0.089 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++.+++++++|.+ .+++++||++|+..++++++... ...| .+++.+++.+...|.+...+....+..
T Consensus 69 ~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~~~~~~~----~~~~---~~~~~vi~~~~~yh~~~~~~~~~~~~~ 139 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD--RVFFCNSGAEANEAALKLARKYT----GDKG---KEKKKIIAFENSFHGRTMGALSATGQP 139 (379)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHh----hccC---CCCCeEEEECCCcCCccHHHHHhcCCh
Confidence 45666778899999886 69999999999999999876420 0001 023434444444454433333322211
Q ss_pred CCCeEEeeCCCCCCC----CHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHHHHHHHcCcEEEeeccc
Q psy12303 192 TDNCVEVPSDKRGRL----IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~----d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.......+...+... |+++|++.+++. +++|+++..++++|... ++++|.++|+++|+++++|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~ 213 (379)
T TIGR00707 140 KYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQ 213 (379)
T ss_pred hhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 000011222222211 899999988764 78999988877777642 3899999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
++.......... ...++ ..|+++ ++|.++.+.++|+++.. ++............ .+ +
T Consensus 214 ~~~~~~g~~~~~-~~~~~-~~d~~t--~sK~~~~G~riG~~~~~-~~~~~~~~~~~~~~---------------~~---~ 270 (379)
T TIGR00707 214 TGIGRTGKFFAY-EHYGI-EPDIIT--LAKGLGGGVPIGATLAK-EEVAEAFTPGDHGS---------------TF---G 270 (379)
T ss_pred cCCCccchhhhH-HhcCC-CCCEEE--EcccccCCcccEEEEEc-HHHHhhhcCCCCCC---------------CC---C
Confidence 854321111110 11222 356554 68999977789998864 44443322110000 00 1
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE--e-cCCceeEEEEEeecCccCCCchhhHHHH
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL--I-LEPEMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~--~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
+..+...++.++|+.+.. .+..++.+++++++++.|.+ . +... . .++....+.+.+ +..
T Consensus 271 ~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~g~~~~~~~-~~~------------ 332 (379)
T TIGR00707 271 GNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEE-L-GKNYPNKEVRGKGLMLGIEL-EAP------------ 332 (379)
T ss_pred CCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH-H-HhhCCCCccccCceEEEEEe-cCc------------
Confidence 111233344444554322 24556677777777777765 3 2111 0 112233333432 111
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.|.+.|+.+... + .+++|++ ++...|+++|++++++|+++
T Consensus 333 ----~~~~~~~l~~~Gv~v~~~----~-~~~lRi~-~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 ----CKDIVKKALEKGLLVNCA----G-PKVLRFL-PPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ----HHHHHHHHHHCCcEEeeC----C-CCEEEEE-CCCcCCHHHHHHHHHHHHHh
Confidence 135667788888554432 2 4689999 77888999999999999875
No 266
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=8.1e-19 Score=152.73 Aligned_cols=164 Identities=27% Similarity=0.294 Sum_probs=129.5
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH-HHHHHcCCCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR-SCAAVCGLGTDN 194 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~-~~~~~~g~~~~~ 194 (480)
+++++++++++.+..++++++|||+|+..++.+++. +++ .|+++...|++.. ..+...|. +
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------------~~~-~v~~~~~~~~~~~~~~~~~~g~---~ 65 (170)
T cd01494 4 ELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--------------PGD-EVIVDANGHGSRYWVAAELAGA---K 65 (170)
T ss_pred HHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--------------CCC-EEEEeecccceehhhHHHhcCC---E
Confidence 567889999976566799999999999999998864 224 7888888998888 77777777 7
Q ss_pred eEEeeCCCCCCCCHH--HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPS--ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 195 v~~v~~~~~~~~d~~--~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~ 272 (480)
++.++.+.++..+.+ .+++.. .+.+|++++++++++++|...|+++|.++|+++|+++|+|++|+++......
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~ 140 (170)
T cd01494 66 PVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG 140 (170)
T ss_pred EEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc
Confidence 888888765443332 333322 2345899999999999999999999999999999999999999998875532
Q ss_pred ccCcccCCCCCCccceeCccccCCCcccceEEEEe
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
.. .. ..++|+++.|+||++++ .++|++++|
T Consensus 141 ~~---~~-~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 VL---IP-EGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cc---cc-cccCCEEEEEcccccCC-CceEEEEeC
Confidence 11 11 12799999999999997 789999875
No 267
>PRK08637 hypothetical protein; Provisional
Probab=99.80 E-value=6.6e-17 Score=159.91 Aligned_cols=331 Identities=14% Similarity=0.045 Sum_probs=193.5
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC-CCC---CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG-WQG---GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g-~~~---~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+..........|....+...+.+.+.+++.+..+ ..+ .++++|+|+++++..++.+..+
T Consensus 25 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~------------- 91 (388)
T PRK08637 25 LQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD------------- 91 (388)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC-------------
Confidence 33444443333445565555556666666666554332 222 4689999999999888877654
Q ss_pred cCCceEEEecCCCchhHHHHHH-HcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAA-VCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~-~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|++..++|+.+...+. ..|. +++.+|.. +++.+|+++++++++.... ....++++++++||||.+.+
T Consensus 92 -~gd-~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~~~~~d~~~l~~~~~~~~~--~~~~~~~~~~P~NPTG~~~s 164 (388)
T PRK08637 92 -QGD-TVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDEDGGFDTDALKEALQAAYN--KGKVIVILNFPNNPTGYTPT 164 (388)
T ss_pred -CCC-EEEEcCCCCccHHHHHHHhcCC---EEEEecccCCCCcCCHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCC
Confidence 556 78899999998887654 5677 78889883 5567899999998872211 12567888899999999866
Q ss_pred ---hHHHHHHHHH-----cCcEEEeeccccccccccccccC--cccCCC-CCCccc-eeCccccCC-CcccceEEEEeC-
Q psy12303 243 ---IEEIADICQK-----YNMWLHVDAAWGGGLLLSKKYRH--PRLTGI-ERADSV-TWNPHKLMG-TLLQCSTIHFKQ- 308 (480)
Q Consensus 243 ---l~~I~~i~~~-----~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~-~~~D~~-~~s~hK~~~-~p~~~g~~~~~~- 308 (480)
+++|+++|++ |++++++|++|............ ..+.+. +++-.+ +.++.|.++ .+..+|++++..
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~ 244 (388)
T PRK08637 165 EKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTK 244 (388)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccc
Confidence 5677777765 89999999999876542211100 011111 122122 237888654 447899998753
Q ss_pred ----chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHH----HHHHHHHHHHHHHHHH
Q psy12303 309 ----DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGF----EKQIDRLMELAEYMVK 380 (480)
Q Consensus 309 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~----~~~~~~~~~l~~~l~~ 380 (480)
+.+.+............... ....+...++...+....+ ++......+..+.+.+
T Consensus 245 ~~~~~~l~~~~~~~~~~~~~~~~~-----------------~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 307 (388)
T PRK08637 245 AGSSQTVKEALEKKVKGLIRSNIS-----------------NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKE 307 (388)
T ss_pred cCCcHHHHHHHHHHHHHHhhcccC-----------------CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333321100000000000 0122233333333322223 2233344455556667
Q ss_pred HHhcCC---CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEec
Q psy12303 381 KIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNII 456 (480)
Q Consensus 381 ~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~ 456 (480)
.|++ . +++.+. +|..+.++|...+ . .+ ..++.+.+. +.|+.+... + .+++|+++
T Consensus 308 ~l~~-~~~~~~~~~~-~~~~g~~~~~~l~-~------------~~--~~~l~~~l~~~~gv~~~~~----~-~~~iRi~~ 365 (388)
T PRK08637 308 VLYD-GKYDDAWQAY-PFNSGYFMCLKLK-G------------VD--AEELRVHLLEKYGIGTIAL----N-ETDLRIAF 365 (388)
T ss_pred HHHh-hCCCCCcccc-cccceEEEEecCC-h------------HH--HHHHHHHHhhhcceEEEec----c-CCceEEEe
Confidence 7766 3 256653 5666666653222 1 00 235667775 456544321 3 46899995
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 457 SSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 457 ~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
.. .++++++..+++|.++++.|
T Consensus 366 ~~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 366 SC--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ec--CCHHHHHHHHHHHHHHHHhc
Confidence 43 57899999999999887653
No 268
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=3.2e-17 Score=169.26 Aligned_cols=177 Identities=23% Similarity=0.271 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
.-.+..+.+|++||++. .-++++|+|.+|..++.+++. ||+ .|+++..+|-|+..++.+.|+
T Consensus 206 ~I~eAq~~aA~~fgA~~-t~FlvNGST~gn~a~i~a~~~--------------~gd-~Vlv~RN~HKSv~~al~L~ga-- 267 (755)
T PRK15029 206 AFGESEKYAARVFGADR-SWSVVVGTSGSNRTIMQACMT--------------DND-VVVVDRNCHKSIEQGLILTGA-- 267 (755)
T ss_pred HHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHHhcC--------------CCC-EEEeecccHHHHHHHHHHcCC--
Confidence 34556788999999975 568889999999988887765 556 899999999999999999998
Q ss_pred CCeEEeeCC--CC---CCCC-----HHHHHHHHHHHH----HCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 193 DNCVEVPSD--KR---GRLI-----PSELERLVLERK----AKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 193 ~~v~~v~~~--~~---~~~d-----~~~L~~~i~~~~----~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
..++++.. .. +.++ ++.++++|++.. ..+.+|++|++|+| |..|.+.++++|+++|++++++|+
T Consensus 268 -~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~ll 345 (755)
T PRK15029 268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLH 345 (755)
T ss_pred -eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEE
Confidence 55666433 21 3455 999999997642 13456779999999 678999999999999999999999
Q ss_pred eeccccccccccccccC-cccC----CCCCCc-cceeCccccCCCcccceEEEEeCc
Q psy12303 259 VDAAWGGGLLLSKKYRH-PRLT----GIERAD-SVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~-~~~~----~~~~~D-~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
||+|||+...+.+.++. ..+. .-.++| +++-|.||.+.+-...+++.+++.
T Consensus 346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred EECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 99999998877765531 1221 113788 888899999998888999998665
No 269
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.80 E-value=2.9e-16 Score=155.63 Aligned_cols=308 Identities=10% Similarity=0.056 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.+...++.+.+++++..+...+.|+++|||||..|++.||... ..+|. ..+|......|.....+....+.
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t----~~~gr-----~~ii~~~~~yHG~t~~~ls~t~~ 186 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQ----SPRGK-----FTFIAASGAFHGKSLGALSATAK 186 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHH----hhcCC-----cEEEEECCCccCCCHHHhhccCC
Confidence 3445567788888875433468999999999999999998741 11121 22455555667766665554331
Q ss_pred C---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 G---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
. ...+..+|.+ |.+++++.+++....+..+++|+++......|.+.| ++++.++|++||+.+
T Consensus 187 ~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~ll 261 (442)
T TIGR03372 187 PAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALL 261 (442)
T ss_pred cccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 1 1123445544 678888888664444556899999999999899887 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
++|+++.|+......+.. ...++ .+|+++ +.|.++++ .++|+++.+ +++..... ..++....
T Consensus 262 I~DEV~tG~GRtG~~~a~-e~~gv-~PDivt--~gK~lg~G~~Pigavv~~-~~i~~~~~--~~~~~~~~---------- 324 (442)
T TIGR03372 262 ILDEVQTGMGRTGKMFAC-EHEGV-QPDILC--LAKALGGGVMPIGATIAT-EAVFSVLF--DNPFLHTT---------- 324 (442)
T ss_pred EEeecccCCCccccchhh-hhcCC-CCCeee--ehhhhcCCcccceEEEec-HHHHHhhh--ccCccccC----------
Confidence 999999875444433333 34455 689888 67999877 478888875 34433321 11111110
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CC-CeEEecCCceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PD-KFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~-g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
++ .+.+....+..++|+.+-.+ ++.++..++.++|.+.|++. .| .+.-+ ...+.++.+.+....
T Consensus 325 -T~---~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~~~---- 392 (442)
T TIGR03372 325 -TF---GGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRDNE---- 392 (442)
T ss_pred -CC---CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCChH----
Confidence 00 11222333344445444333 34566667777777776651 23 12111 122333333332110
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
....+.+.+.++|.++ .... .+ .+.+|+. ++..+|++|||++++++++.
T Consensus 393 -----------~~~~i~~~l~~~Gvl~-~~~~-~~-~~~lr~~-Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 393 -----------IGYAFAKELFQQNILV-AGTL-NN-AKSIRIE-PPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred -----------HHHHHHHHHHHCCcEE-eecC-CC-CCEEEEE-CCcccCHHHHHHHHHHHHHh
Confidence 1246778888888554 3211 12 4689999 99999999999999999875
No 270
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=2.7e-17 Score=160.92 Aligned_cols=218 Identities=13% Similarity=0.131 Sum_probs=152.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS--- 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~--- 183 (480)
.|....+| +.++++.|.+. .+++++|+.|+..++ .+.. ||+ +|+++...|.+...
T Consensus 49 ~p~~~~Le----~~la~l~g~~~--al~~~SG~~Al~~~l-~~l~--------------pGd-~Vi~~~~~y~~t~~~~~ 106 (380)
T PRK06176 49 NPTRFALE----ELIADLEGGVK--GFAFASGLAGIHAVF-SLFQ--------------SGD-HVLLGDDVYGGTFRLFD 106 (380)
T ss_pred ChhHHHHH----HHHHHHhCCCC--EEEECCHHHHHHHHH-HHcC--------------CCC-EEEEcCCChhHHHHHHH
Confidence 34444444 55888888765 577788888887544 3322 556 77777777765543
Q ss_pred -HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 184 -CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 184 -~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
.+...|+ ++.+++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++
T Consensus 107 ~~~~~~gi---~v~~vd~~-----d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t 172 (380)
T PRK06176 107 KVLVKNGL---SCTIIDTS-----DLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNT 172 (380)
T ss_pred HHHHhcCe---EEEEcCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence 3344455 66666653 899999988765 89999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
|+.+....+ ..+ ++|+++.|++|++++|.. .|+++.+++.+........ ..
T Consensus 173 ~a~~~~~~p-~~~-------gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~-~~------------------ 225 (380)
T PRK06176 173 FATPYYQNP-LLL-------GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ-NA------------------ 225 (380)
T ss_pred ccccccCCc-ccc-------CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHH-HH------------------
Confidence 987543222 233 899999999999998753 5656655554433221100 00
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+........|..++ |.+.+..+.++..+++..+.+.|++ .|.+.-+
T Consensus 226 --~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~-~p~v~~v 272 (380)
T PRK06176 226 --IGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEK-HPKVEKV 272 (380)
T ss_pred --hcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHh-CCCeeEE
Confidence 111123345565543 4566778888889999999999999 8887644
No 271
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.80 E-value=8.2e-17 Score=150.07 Aligned_cols=365 Identities=13% Similarity=0.067 Sum_probs=235.9
Q ss_pred CCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHH-HHHHH--HcCc-CCcchhcChhhHHHHHHHHHHHHHH
Q psy12303 49 KGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAG-EWLIA--TANT-NMFTYEIAPVFILMETVVLEKMRQI 124 (480)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~--~~~~-~~~~~~~~~~~~~~e~~~~~~la~~ 124 (480)
.+.+..++++.++++...+. ..+.|++...-+...|+++. .++.. ++.. .++..+.|.+.-+.--+....++++
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~--~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL 132 (450)
T COG0403 55 KPLSEYEALAELKEIASKNK--VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL 132 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCc--hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 46699999999999887665 44556665444444444443 44442 2221 1244455666555556678999999
Q ss_pred hCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc--CCCCCCeEEeeCCC
Q psy12303 125 IGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC--GLGTDNCVEVPSDK 202 (480)
Q Consensus 125 ~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~--g~~~~~v~~v~~~~ 202 (480)
.|.+-.+..+..++|.+-..++++-|..+ . + +.+++++...|+.....++.. +.|. +++.++.+
T Consensus 133 TGm~VANASm~DeaTAaAEAm~ma~r~~k-------~----k-~~~~~V~~~vhpqt~~Vl~Tra~~~g~-~i~~~~~~- 198 (450)
T COG0403 133 TGLDVANASMLDEATAAAEAMLMAKRVTK-------K----K-RNKFLVPKDVHPQTLDVLRTRAEGLGI-EIEVVDAD- 198 (450)
T ss_pred hCCCcccchhhhhHHHHHHHHHHHHHhhc-------C----c-CceEEecCCCCHHHHHHHHhhcccCce-EEEEeccc-
Confidence 99999999999999987776666655431 0 1 238999999999998888765 3322 66666655
Q ss_pred CCCCCHHHHHHHHHH-HHHCCCccEEEEeccCCCccc-cccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCC
Q psy12303 203 RGRLIPSELERLVLE-RKAKGDIPFFVNCTSGTTVLG-AFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTG 280 (480)
Q Consensus 203 ~~~~d~~~L~~~i~~-~~~~~~~~~~v~~~~~~~~~G-~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 280 (480)
|.++|+++ ++ + +++|++..|+ ..| ...++.+|.+.++++|+.++|=.---...+.-+...+
T Consensus 199 ----d~~~l~~~-~~~~------~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~----- 261 (450)
T COG0403 199 ----DLDDLESA-DDGD------VFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEF----- 261 (450)
T ss_pred ----hhhhhhhc-cccC------eEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcccc-----
Confidence 78888887 43 3 8999999995 567 6678999999999999988775422222233333344
Q ss_pred CCCCccceeCccccCC----CcccceEEEEeCchhhHhhhcCCcccccccccccCc---------------ccCCCCccc
Q psy12303 281 IERADSVTWNPHKLMG----TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV---------------RYDTGDKVI 341 (480)
Q Consensus 281 ~~~~D~~~~s~hK~~~----~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------------~~~~~~~~~ 341 (480)
++|+++.+.+.++- +++.+|++-++++- . ...|+.+.+......+ +.+--+.++
T Consensus 262 --GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-~----R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI 334 (450)
T COG0403 262 --GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-K----RQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI 334 (450)
T ss_pred --CCceEEecCcccCCCcCCCCcceeeeeEhHhH-h----hcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh
Confidence 99999999997743 22346777776542 2 2345544443221111 111111111
Q ss_pred cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 342 QCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 342 ~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
|+.. ..++.+.+.+..+|.+|++++.++.++++.++.+.|++ . .|++++.+..+..++++... .
T Consensus 335 -CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~-~~~g~~~~~~~fFdt~~v~~~~-~----------- 400 (450)
T COG0403 335 -CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKE-IGAGVELVFDHFFDTFTVRVPE-E----------- 400 (450)
T ss_pred -hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh-cCCceEeccccceeeEEEecch-h-----------
Confidence 1111 12333334455679999999999999999999999996 3 47998867666667665321 1
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
....+..+....|.-+-. .. ...+-++ ....+|++||+.+++.+....
T Consensus 401 ----~~~~l~~~~~~~G~~L~~---~~--~~~~~ia-~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 401 ----VAEALLAAAIAGGINLRR---VD--ADTVLIA-LTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred ----HHHHHHHHHHhcCCceee---ec--CCceEEE-eecccCHHHHHHHHHHHhhhc
Confidence 123455555566632211 11 2356677 778899999999999987643
No 272
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=1.5e-16 Score=158.85 Aligned_cols=311 Identities=12% Similarity=0.095 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++.+.+++++..+...+.|+++||+|+..|++.||... ..+|. ..+|......|.....+....+.
T Consensus 123 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t----~~~gr-----~~ii~~~~~yHG~t~~~ls~~~~ 193 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQ----SPRGK-----FTFIATSGAFHGKSLGALSATAK 193 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHh----ccCCC-----cEEEEecCCCCCCcHHHhhhcCC
Confidence 4455567777888765433569999999999999999998751 11111 22444555567666555555442
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
.. ..+..+|.+ |.+++++.+++....+..+++|+++..+...|.+.| ++++.++|++||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~ll 268 (459)
T PRK11522 194 STFRKPFMPLLPGFRHVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALL 268 (459)
T ss_pred cccccCCCCCCCCCcccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 11 112233332 788899988765444556889999999999999877 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
++|+++.|+......+.. ...|+ ..|+++ +.|.++++ .++|+++.++ +....... .++....
T Consensus 269 I~DEV~tG~GRtG~~~a~-e~~gv-~PDivt--~gK~lggG~~Pigav~~~~-~i~~~~~~--~~~~~~~---------- 331 (459)
T PRK11522 269 ILDEVQTGMGRTGKMFAC-EHENV-QPDILC--LAKALGGGVMPIGATIATE-EVFSVLFD--NPFLHTT---------- 331 (459)
T ss_pred EeccceecCCccchhhhh-hccCC-CCCEEE--echhhhCCCccceeEEEcH-HHHHHhcc--CCcccCC----------
Confidence 999999875444433333 34455 689887 57999877 4789888764 33332211 1111110
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeE-EecC--CceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFY-LILE--PEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~-~~~~--~~~~~v~f~~~~~~~~~~ 412 (480)
++ .+.+....++.++|+.+-.+ ...++..++.++|.+.|++ +. ++. ++.. -.+.++.+.+....
T Consensus 332 ---T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~-l~~~~~~~i~~VrG~Gl~~giel~~~~---- 399 (459)
T PRK11522 332 ---TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQ-LAREYPDLVQEARGKGMLMAIEFVDNE---- 399 (459)
T ss_pred ---CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH-HHHhCCCceeeEEeceeEEEEEecCch----
Confidence 00 11222333444555554333 4567888888888888876 31 121 1111 12233333332110
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....+.+.+.++|.++ .... .+ .+.+|++ ++..+|++||+++++++++.+++
T Consensus 400 -----------~~~~i~~~l~~~Gvl~-~~~~-~~-~~~lr~~-Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 400 -----------IGYNFASEMFRQRVLV-AGTL-NN-AKTIRIE-PPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred -----------HHHHHHHHHHHCCeEE-EecC-CC-CCEEEEE-CCccCCHHHHHHHHHHHHHHHHH
Confidence 1245778888888544 3322 22 4799999 99999999999999999887653
No 273
>PLN02624 ornithine-delta-aminotransferase
Probab=99.79 E-value=2.1e-16 Score=159.15 Aligned_cols=309 Identities=13% Similarity=0.100 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
.....++.+.+++++|.+ .+.|+++|++||..|++.++.... ..+|.. +++. .|......|.....+....+
T Consensus 116 ~~~~~~la~~L~~~~~~~--~~~f~~SGseA~e~AlklAr~~~~---~~~g~~--~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 116 NDKFPEFAEYLTSMFGYD--MVLPMNTGAEGVETAIKLARKWGY---EKKGIP--KNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred CHHHHHHHHHHHhhcCCC--eEEEeCChHHHHHHHHHHHHHHHH---hhcCCC--CCCcEEEEECCCcCCCCHHHhhcCC
Confidence 344456677788888764 599999999999999999986311 111211 1222 34444445655444444332
Q ss_pred CC---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcE
Q psy12303 190 LG---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMW 256 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~ 256 (480)
-. ...+..+|.+ |++.|++.++. .+..+++|+++.+++++|.+.| +++|.++|++||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gil 260 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVL 260 (474)
T ss_pred CccccccCCCCCCCceEeCCC-----CHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 11 0123444443 78899988863 2345899999999999999877 99999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
+++|++|.+.......+.. ...++ .+|++++ .|.++++ .++|+++.++ +.+..... ... .
T Consensus 261 lI~DEv~tG~GrtG~~~a~-~~~~i-~pDiv~l--sK~lggG~~pigav~~~~-~i~~~~~~---~~~-~---------- 321 (474)
T PLN02624 261 MIADEIQTGLARTGKMLAC-DWEEV-RPDVVIL--GKALGGGVIPVSAVLADK-DVMLCIKP---GEH-G---------- 321 (474)
T ss_pred EEEeccccCcCcCcchhhH-HhcCC-CCCEEEe--cccccCCCCcceeeeecH-HHHhHhcc---CCc-C----------
Confidence 9999999864332222211 22344 5788885 5998877 5788888653 33332211 000 0
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCC-eEEecCCceeEEEEEeecCccCC
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDK-FYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g-~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
. ++ ++.+....++.++++.+..+ ++.++..++.++|.+.|.+. .+. +.-+ .+...++.+.+..... +
T Consensus 322 -~--T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~-~ 392 (474)
T PLN02624 322 -S--TF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKL-G 392 (474)
T ss_pred -C--CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCc-C
Confidence 0 00 11112233333444443222 23345555666666655440 232 2222 2333344333321110 0
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.. ...++.+.|.+.|+++ .+. + .+++|++ ++..+|++||++++++|+++++
T Consensus 393 ---~~-------~a~~~~~~L~e~GV~v-~p~---~-~~~lR~~-p~l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 393 ---PV-------SAYDVCLKLKERGLLA-KPT---H-DTIIRLA-PPLSISEDELQECSKALSDVLE 443 (474)
T ss_pred ---hH-------HHHHHHHHHHhCCeEE-ecC---C-CCEEEEE-CCccCCHHHHHHHHHHHHHHHH
Confidence 00 1245677888888544 332 2 4789999 8889999999999999988764
No 274
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.79 E-value=3.3e-17 Score=158.75 Aligned_cols=349 Identities=14% Similarity=0.163 Sum_probs=208.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhc
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKM 153 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~ 153 (480)
-|++..+.+.+.+..-..+... -.....|..+|.+.++|+. +++++|.+. ++.|++||.|+..+..+..
T Consensus 46 v~IDLlSDS~T~aMs~~q~a~~--~vGDd~Yagd~s~~~LE~~----vAe~lG~e~--aV~v~sGTaAl~ll~~l~v--- 114 (460)
T PRK13237 46 VYIDLLTDSGTNAMSDRQWAGM--MIGDEAYAGSRNFYHLEET----VQEYYGFKH--VVPTHQGRGAENLLSRIAI--- 114 (460)
T ss_pred EEEECcccCCchhccHHHHHHH--hhcchhhcCCCcHHHHHHH----HHHHHCCCe--EEEeCCHHHHHHHHHHhCC---
Confidence 3666666655533122112222 2233567788888888887 777889876 9999999999987533221
Q ss_pred CchhHhcCCCccCCceEEEecCCCchhHHHH-HHHcCCCCCCeEEeeC----------CCCCCCCHHHHHHHHHHHHHCC
Q psy12303 154 FPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC-AAVCGLGTDNCVEVPS----------DKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 154 ~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~-~~~~g~~~~~v~~v~~----------~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
.||+ +| +..+|.....+ ....|. ..+-+.. ..+|.+|+++|+++|++.. .
T Consensus 115 -----------~pGd-~V--p~n~~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~ 175 (460)
T PRK13237 115 -----------KPGQ-YV--PGNMYFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--A 175 (460)
T ss_pred -----------CCcC-EE--CCccchHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhcccc--C
Confidence 1556 44 66778777666 555554 2332321 2368999999999998542 1
Q ss_pred CccEEEEeccCCCcc-ccc---cChHHHHHHHHHcCcEEEeecccccccc-ccc----cccCccc-----CCCCCCccce
Q psy12303 223 DIPFFVNCTSGTTVL-GAF---DPIEEIADICQKYNMWLHVDAAWGGGLL-LSK----KYRHPRL-----TGIERADSVT 288 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~-G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~~----~~~~~~~-----~~~~~~D~~~ 288 (480)
.++.+|.++..+|.. |.. .++++|.++|++||+++|.|+|+..+.. ++. .+....+ .-...+|.++
T Consensus 176 ~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t 255 (460)
T PRK13237 176 ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCT 255 (460)
T ss_pred CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEE
Confidence 235567777777777 444 4789999999999999999999987733 221 1111000 1124789999
Q ss_pred eCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHH
Q psy12303 289 WNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQI 368 (480)
Q Consensus 289 ~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~ 368 (480)
+|+||.+.+|. .|+++++++++.+.+......|-.- ..++.. .+|...++ ..++...-. .+++
T Consensus 256 ~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~--------~tygg~---~grd~~al--Avgl~E~~~---~~y~ 318 (460)
T PRK13237 256 MSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEGM--------PSYGGM---AGRDMEAM--AIGIEESVQ---YEYI 318 (460)
T ss_pred EeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCCC--------cCCCCh---hhhHHHHH--HhHHHhhch---HHHH
Confidence 99999999866 5888889988777665443322100 001100 12222222 223332111 2667
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-ccc-------EEE
Q psy12303 369 DRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGT-------MMV 440 (480)
Q Consensus 369 ~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~-------~~~ 440 (480)
++..+.+++|.+.|.+ .|+.++. |..+.-+|..-..-+...+..+ +- ...+...|.. .|+ +..
T Consensus 319 ~~ri~~~~~l~~~L~~--~Gvpv~~-p~ggH~v~vda~~~lph~~~~~----~p--~~al~~~ly~~~GiR~~e~g~~~~ 389 (460)
T PRK13237 319 EHRVGQVRYLGEKLLA--AGVPIVE-PVGGHAVFLDARRFLPHLPQDQ----FP--AQALAAELYIESGVRSMERGIVSA 389 (460)
T ss_pred HHHHHHHHHHHHHHHH--CCCceec-CCCceEEEEEhHHhCCCCCccc----Ch--HHHHHHHHHHHhCcCeEeecceec
Confidence 7888899999999999 7999985 4444444421110000000001 10 1223333322 332 222
Q ss_pred eeeeeCCc-----ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 441 GYQPLNDL-----PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 441 ~~~~~~~~-----~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
...+..+. -..+|++++-..-|.+++|+++++|..+.+
T Consensus 390 ~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 390 GRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred ccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH
Confidence 21111111 257999988888899999999999988765
No 275
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.79 E-value=1.5e-16 Score=158.10 Aligned_cols=309 Identities=11% Similarity=-0.008 Sum_probs=182.4
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.|...++...+.+++++++.+. +++++++++|+|+++++...+ .+.. ||+ .|++..++|+.+.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~l~-~l~~--------------~gd-~Vlv~~P~y~~~~ 132 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFRLQ-SLFG--------------SDN-TVAVQDPVYPAYV 132 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHHHH-HhcC--------------CCC-EEEEeCCCCcchH
Confidence 3544455566666655553221 577789999999999887643 3322 445 7888889999999
Q ss_pred HHHHHcCCCCC--------CeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHH
Q psy12303 183 SCAAVCGLGTD--------NCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADI 249 (480)
Q Consensus 183 ~~~~~~g~~~~--------~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i 249 (480)
..++..|+.+. .++.+|.+++ +..|++ +. .++++|++++++||||.+.+ +++|.++
T Consensus 133 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~--------~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~ 201 (402)
T TIGR03542 133 DSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP---EE--------PKIDIIYLCSPNNPTGTVLTKEQLKELVDY 201 (402)
T ss_pred HHHHHcCCccccccccccceEEEeecchhhCCCCCcc---cc--------CCceEEEEeCCCCCCCccCCHHHHHHHHHH
Confidence 99998887211 5667777643 333321 10 13789999999999999977 7889999
Q ss_pred HHHcCcEEEeeccccccccccccccCcccCCCCC---CccceeCccccCC-CcccceEEEEeCchhhHhh-hcCCccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIER---ADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISC-NQMSAEYLF 324 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~---~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~-~~~~~~~l~ 324 (480)
|++||+++++|++|..+...... .. .+..+.. .-+++.|++|.++ .+..+|++++... ++... ......+..
T Consensus 202 a~~~~~~iI~De~y~~~~~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~ 278 (402)
T TIGR03542 202 ANEHGSLILFDAAYSAFISDPSL-PH-SIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWER 278 (402)
T ss_pred HHHcCeEEEEEchhhhhccCCCC-Cc-chhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHH
Confidence 99999999999999876431110 11 1111211 2245679999996 4478999887543 32000 000000000
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS 401 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~ 401 (480)
..... ......+...++...+ +...+.+.++...+..+.+.+.|++ . ++++. ++..+.+.
T Consensus 279 ~~~~~--------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~-~~~~~~f~ 341 (402)
T TIGR03542 279 RQCTK--------------FNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA-A-GFKVY-GGEHAPYL 341 (402)
T ss_pred Hhhhc--------------ccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh-c-Cceec-CCCceeEE
Confidence 00000 0001122222222222 1233555666777888889999998 4 77764 44455454
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
|.-.+.... ..++.+.+.+ .|+.+.....+.. ..+++|+++. .++++++..++.|++.
T Consensus 342 ~v~l~~~~~--------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 342 WVKTPEGIS--------------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF---GKRENIVEACERIKEA 401 (402)
T ss_pred EEECCCCCC--------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHhh
Confidence 433332211 1356677664 5654443322221 1479999943 2789999999998765
No 276
>PRK05939 hypothetical protein; Provisional
Probab=99.79 E-value=1.4e-17 Score=163.63 Aligned_cols=240 Identities=12% Similarity=0.043 Sum_probs=158.8
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH---
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--- 182 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--- 182 (480)
..|....+|++ ++++.|... .+.+++|+.|+..++.+... ||+ .|+++...|++..
T Consensus 45 g~p~~~~lE~~----la~leg~~~--~v~~ssG~~Ai~~~l~all~--------------~Gd-~Vv~~~~~y~~t~~~~ 103 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGVG--TVCFATGMAAIAAVFLTLLR--------------AGD-HLVSSQFLFGNTNSLF 103 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCCe--EEEeCCHHHHHHHHHHHHcC--------------CCC-EEEECCCccccHHHHH
Confidence 45666666666 788888865 67777789999888877643 556 6777877776543
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+...|+ +++.++.. |+++++++++++ |++|++++++|++|.+.|+++|+++|+++|+++++|++
T Consensus 104 ~~l~~~G~---~v~~v~~~-----d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t 169 (397)
T PRK05939 104 GTLRGLGV---EVTMVDAT-----DVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNT 169 (397)
T ss_pred HHHHhcCC---EEEEECCC-----CHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECC
Confidence 34555566 78888764 899999998765 89999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhhH-hhhcCCcccccccccccCcccCCC-Cc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLLI-SCNQMSAEYLFMQDKLYDVRYDTG-DK 339 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-~~ 339 (480)
|+.+.. .+.... ++|+++.|++|+++++.. .|++++.+...-. ........|.......+. ..... ..
T Consensus 170 ~a~~~~-~~~~~~-------gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (397)
T PRK05939 170 MTSPWL-FRPKDV-------GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWG-LTQIRKKG 240 (397)
T ss_pred cccccc-cCcccc-------CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHH-HHHHHHHH
Confidence 976643 222233 799999999999997532 3555543221100 000000000000000000 00000 00
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
....|....+..+|+.++ |.+.+..+++++.+++..+.+.|++ +|.+.-+
T Consensus 241 ~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~-~p~V~~V 290 (397)
T PRK05939 241 LRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEA-HPKVARV 290 (397)
T ss_pred HHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 001222345566776654 5778889999999999999999999 8877533
No 277
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.79 E-value=5.8e-17 Score=156.51 Aligned_cols=321 Identities=11% Similarity=0.039 Sum_probs=202.8
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCC-CC-eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH-
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQG-GD-SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV- 181 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~-~~-~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~- 181 (480)
..+|.+.++-.++.+.+.++++.+. .. .+++.|||.++..++...... +|+ .+++.. .++-
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~-------------~g~-~vLv~g--~FG~r 95 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC-------------RGV-DVLAWE--SFGKG 95 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC-------------CCC-eEEEEC--HHHHH
Confidence 3478889999999999999999864 23 567999999888888766431 334 444443 4443
Q ss_pred -H-HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 182 -R-SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 182 -~-~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
. ..++.+|+. ++..+..+....+|+++++. . . .|++++..|.||...|+++|+..+ ++..++|
T Consensus 96 ~~~eia~~~g~~--~v~~l~~~~g~~~~~~~ve~----~------~-~v~~vhnETSTGv~npv~~i~~~~--~~~lliV 160 (374)
T TIGR01365 96 WVTDVTKQLKLP--DVRVLEAEYGKLPDLKKVDF----K------N-DVVFTWNGTTSGVRVPNGDFIPAD--REGLTIC 160 (374)
T ss_pred HHHHHHHhcCCC--CcEEEcCCCCCCCCHHHcCC----C------C-CEEEecCCCchheecccccccccc--CCCcEEE
Confidence 3 667778873 25666666666789998872 1 1 267999999999999998766432 5899999
Q ss_pred eccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCc-----ccccccccccCccc
Q psy12303 260 DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSA-----EYLFMQDKLYDVRY 334 (480)
Q Consensus 260 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~ 334 (480)
|++-+.+..+++.. ++|++..+.+|.+++|.|.|+++++++.+.. ...... .|+...... ....
T Consensus 161 DavSs~g~~~l~~d---------~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~~~~~y~~~~~~~~~~~~~-~~~~ 229 (374)
T TIGR01365 161 DATSAAFAQDLDYH---------KLDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LESYTPAWPLPKIFRLTKGG-KLNK 229 (374)
T ss_pred EccchhcCCCCChh---------HCcEEEEechhccCCCCceEEEEECHHHHHH-HhhcCCCCCChhhhcccccc-chhh
Confidence 99999988766542 4799999999999999999999998775433 221111 111100000 0000
Q ss_pred CCCCccccCCCCCCchHHHHH---HHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-C--cee-EEEEEeec
Q psy12303 335 DTGDKVIQCGRHNDIFKLWLQ---WRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-P--EMV-NVSFWYLP 406 (480)
Q Consensus 335 ~~~~~~~~~~r~~~~l~~~~~---l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~--~~~-~v~f~~~~ 406 (480)
+....+.+.+ .....+++. ++.+-.+ |++++.+|+.++++.+++.+++ +..++++.. + .+. ++++.+.+
T Consensus 230 ~~~~~~t~~T--P~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~-lg~l~~~~~~~~~rS~tvt~v~~~~ 306 (374)
T TIGR01365 230 KIFEGSTINT--PSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAK-NNWIHFLAETPEIRSNTSVCLKVVD 306 (374)
T ss_pred hhhcCCCCCC--hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCChhhcCCCeEEEEeCC
Confidence 0000011111 122333333 3333344 7999999999999999999999 533777652 2 222 34454422
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.++..+.+..++ + ..++.+.|.++|. .+..+.....+..||+. .....+.+||+.+++.|.=+
T Consensus 307 ~~~~~~~~~~~~~-~---~~~~~~~l~~~gi-~i~~G~~~~~~~~fRIg-~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 307 PAIDALDEDAQAD-F---AKELISTLEKEGV-AYDIGSYRDAPSGLRIW-CGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred ccccccccchhhH-H---HHHHHHHHHHCCE-EEeccccccCCCceEEe-cCCcCCHHHHHHHHHHHHHH
Confidence 2221000000000 1 1357788888874 34432222224799999 67788999999999998644
No 278
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=6.7e-17 Score=157.20 Aligned_cols=214 Identities=14% Similarity=0.141 Sum_probs=154.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g~ 190 (480)
+.+.+.++.+-|.+. .+++++|++|+..++.+..+ ||+ +|+++...|+++... +...|+
T Consensus 67 ~~Le~~la~le~~~~--~v~~sSG~aAi~~~l~all~--------------~GD-~Vlv~~~~Y~~~~~l~~~~l~~~Gi 129 (395)
T PRK05967 67 DALCKAIDALEGSAG--TILVPSGLAAVTVPFLGFLS--------------PGD-HALIVDSVYYPTRHFCDTMLKRLGV 129 (395)
T ss_pred HHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHhcC--------------CCC-EEEEccCCcHHHHHHHHHHHHhcCe
Confidence 344555777766543 67777799999988877654 667 788888888887653 355565
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
++..++.+ +.+.++++++++ |++|++++++|+++.+.|+++|+++|+++|++++||++|+.+...
T Consensus 130 ---~v~~vd~~-----~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~- 194 (395)
T PRK05967 130 ---EVEYYDPE-----IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF- 194 (395)
T ss_pred ---EEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-
Confidence 77777543 457788888765 899999999999999999999999999999999999999876443
Q ss_pred ccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
....+ ++|+++.|..|++++... .|++ +.++........ +. . ..|....
T Consensus 195 ~pl~~-------GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~~----~~-~----------------~~G~~~~ 245 (395)
T PRK05967 195 RPLDF-------GVDISIHAATKYPSGHSDILLGTV-SANEKCWPQLLE----AH-G----------------TLGLCAG 245 (395)
T ss_pred ChhHc-------CCCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHHH----HH-H----------------HcCCCCC
Confidence 33345 899999999999775322 4544 444433222210 00 0 0122245
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
...+|..++ |.+.+..+++++.+++..+.+.|++ +|.++-+
T Consensus 246 p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~-hp~v~~V 286 (395)
T PRK05967 246 PDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEG-RPDVARV 286 (395)
T ss_pred HHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHh-CCCCcEE
Confidence 567776655 4778888999999999999999999 8887533
No 279
>PRK06541 hypothetical protein; Provisional
Probab=99.79 E-value=4.8e-16 Score=155.58 Aligned_cols=330 Identities=13% Similarity=0.081 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc-eEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ-LVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~-~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.++++++.+-..+.|+++||+|+..|++.||... +..|. +|+ .+|......|.....+....|
T Consensus 94 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~~a~s~~~ 166 (460)
T PRK06541 94 HPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYF----KLTGK---PGKHKVISRAIAYHGTTQGALAITG 166 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHH----HhcCC---CCccEEEEEcCcccCcchhhhcCcC
Confidence 3445567777888765433579999999999999999998641 11222 222 245555566776666655443
Q ss_pred CC---------CCCeEEeeCCCCCC-----CC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 LG---------TDNCVEVPSDKRGR-----LI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~-----~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
.. ...+..+|.....+ -+ ++.+++.++.. ....+++|+++..+++.|.+.| +
T Consensus 167 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl 244 (460)
T PRK06541 167 LPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYF 244 (460)
T ss_pred ChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHH
Confidence 21 11234444332111 12 24566666531 2245788999888999999988 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++|.++|++||+++|+|+++.++......+.. ...++ ..|+++ +.|.+++++ +.|+++.+++ ...........+
T Consensus 245 ~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~-~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~-i~~~~~~~~~~~ 319 (460)
T PRK06541 245 ERVREICDRYDVLLVSDEVICAFGRLGEMFGC-ERFGY-VPDIIT--CAKGITSGYSPLGAMIASDR-LFEPFLDGPTMF 319 (460)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchhhhh-hhcCC-CCCEEE--ecccccCCccceeEEEEcHH-HHHHhhcCCCcc
Confidence 99999999999999999999665443333222 23455 589887 679998765 7888887544 333222111111
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNV 400 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v 400 (480)
+.. .+.....+++.+++..+..-.-....++..++.++|.+.|++ +....++. ...+.++
T Consensus 320 ~~~-----------------~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~-l~~~~~v~~vrg~Gl~~ 381 (460)
T PRK06541 320 LHG-----------------YTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEK-LLDLPIVGDVRGDGYFY 381 (460)
T ss_pred ccC-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-hhcCCCeEEEEecceEE
Confidence 100 011122333333333321111124567888889999988887 53222211 1333444
Q ss_pred EEEeecCccC--CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 401 SFWYLPTRVR--NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 401 ~f~~~~~~~~--~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.+...... .... ...... ....+...+.++|.++ .+.. .+ .+.+|++ +...+|++||+++++++++.++
T Consensus 382 ~ie~~~~~~~~~~~~~-~~~~~~--~~~~~~~~l~~~Gi~~-~~~~-~g-~~~lrl~-Ppl~~t~~~id~~~~~l~~~l~ 454 (460)
T PRK06541 382 GIELVKDKATKETFTD-DESERL--LRGFLSPALFEAGLYC-RADD-RG-DPVVQLA-PPLISGQEEFDEIEQILRSVLT 454 (460)
T ss_pred EEEEecCcccccCCcc-hhhhhh--HHHHHHHHHHhCCeEE-EecC-CC-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHH
Confidence 4444321100 0000 000000 1135667888888543 3311 23 4689999 8899999999999999998875
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 455 ~ 455 (460)
T PRK06541 455 E 455 (460)
T ss_pred H
Confidence 4
No 280
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.1e-17 Score=163.63 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=153.0
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~~g~ 190 (480)
.++.+.++++.|.+. .+++++|+.++..++ .+.. ||+ .|+++...|.+.... +...|+
T Consensus 53 ~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~-~~l~--------------~Gd-~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 53 AALEELIAVLEGGHA--GFAFGSGMAAITAVM-MLFS--------------SGD-HVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred HHHHHHHHHHhCCCc--eEEeCCHHHHHHHHH-HHhC--------------CCC-EEEECCCccchHHHHHHHHHhcCCe
Confidence 344555899999865 577788887766544 2322 556 777888888754432 233455
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....
T Consensus 115 ---~v~~v~~~-----d~~~l~~ai~~~------tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~ 180 (377)
T PRK07671 115 ---EHTFVDTS-----NLEEVEEAIRPN------TKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS 180 (377)
T ss_pred ---EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 67777643 899999999765 8999999999999999999999999999999999999997654322
Q ss_pred ccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
+ ..+ ++|+++.|++|++++|.+ .|+++++++.......... .+ .+....
T Consensus 181 p-~~~-------g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~-~~--------------------~g~~~~ 231 (377)
T PRK07671 181 P-ISL-------GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ-NS--------------------TGGILG 231 (377)
T ss_pred h-hhh-------CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH-Hh--------------------hcCCCC
Confidence 2 233 789999999999998753 5666666665544332110 01 111134
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
...+|..++. .+.+..++++..+++..+.++|++ .|++.-+.
T Consensus 232 ~~~a~l~~~~--l~tl~~R~~~~~~na~~la~~L~~-~~~v~~v~ 273 (377)
T PRK07671 232 PQDSWLLLRG--LKTLGIRMEEHETNSRAIAEFLNN-HPAVNKVY 273 (377)
T ss_pred HHHHHHHHcC--cChHHHHHHHHHHHHHHHHHHHHc-CCCeeEEE
Confidence 5567766654 455677889999999999999999 88875543
No 281
>PRK04311 selenocysteine synthase; Provisional
Probab=99.78 E-value=3.7e-16 Score=155.08 Aligned_cols=167 Identities=17% Similarity=0.184 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh------HHHHHHHc
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS------VRSCAAVC 188 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s------~~~~~~~~ 188 (480)
..+.+.+++++|.+. ++++++|+.|+..++.+. . +|+ .|+++..+|++ +...+...
T Consensus 130 ~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l-~--------------~Gd-eVIvs~~e~~~~ggs~~i~~~~~~~ 191 (464)
T PRK04311 130 RALAALLCALTGAED--ALVVNNNAAAVLLALNAL-A--------------AGK-EVIVSRGELVEIGGAFRIPDVMRQA 191 (464)
T ss_pred HHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh-C--------------CCC-EEEEcchhhhhcCcchhhHHHHHHC
Confidence 367788999999874 788999999998887543 1 445 78888776663 22345566
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCc--cc--cccChHHHHHHHHHcCcEEEeecccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTV--LG--AFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~--~G--~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
|+ ++++++.+ ...++++++++|+++ |++|++++++|+ +| ...|+++|+++|++||+++++|++.|
T Consensus 192 G~---~l~~v~~~--~~t~~~dle~aI~~~------TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG 260 (464)
T PRK04311 192 GA---RLVEVGTT--NRTHLRDYEQAINEN------TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSG 260 (464)
T ss_pred Cc---EEEEECCC--CCCCHHHHHHhcCcc------CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCc
Confidence 76 77777654 345799999999876 899999999987 34 56799999999999999999999644
Q ss_pred ccccccccc---cCcccCC--CCCCccceeCccccCCCcccceEEEEeCchhhH
Q psy12303 265 GGLLLSKKY---RHPRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLI 313 (480)
Q Consensus 265 ~~~~~~~~~---~~~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~ 313 (480)
... ....+ ..|.+.. -.++|++++|+|||+++|. +|+++.+ +++++
T Consensus 261 ~l~-~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~-~~li~ 311 (464)
T PRK04311 261 SLV-DLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGK-KELIA 311 (464)
T ss_pred ccc-cchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEc-HHHHH
Confidence 321 11000 0011110 0289999999999999874 7777765 44444
No 282
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.78 E-value=1.9e-16 Score=153.05 Aligned_cols=272 Identities=12% Similarity=0.047 Sum_probs=176.1
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
..+++.+++.+|.+ ++++|+|+++++..++.+ . ||+ .|++..++++.+...++.+|. +
T Consensus 52 ~~Lr~~ia~~~~~~--~I~it~Gs~~al~~~~~~--~--------------~gd-~v~v~~P~y~~~~~~~~~~g~---~ 109 (330)
T PRK05664 52 DGLEAAARAYYGAP--QLLPVAGSQAAIQALPRL--R--------------APG-RVGVLSPCYAEHAHAWRRAGH---Q 109 (330)
T ss_pred HHHHHHHHHHhCCC--CEEECcCHHHHHHHHHHc--c--------------CCC-EEEEcCCChHHHHHHHHHcCC---e
Confidence 35677788888864 699999999988766421 1 556 789999999999999999998 7
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++.+|.+ ++++.++ . ++++++++|+||||.+.+ +++|.++|+++++++++|++|..+.- .+
T Consensus 110 ~~~v~~~--------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~-~~ 173 (330)
T PRK05664 110 VRELDEA--------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP-QH 173 (330)
T ss_pred EEEechh--------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC-cc
Confidence 7777653 4555553 2 668899999999999977 55566667899999999999975431 11
Q ss_pred cccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
... .+..- .--+++.|++|.++ .+..+|+++. ++.+..........+. ...+
T Consensus 174 s~~--~~~~~-~~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~-----------------------~~~~ 226 (330)
T PRK05664 174 SLA--ACAHR-PGLIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWT-----------------------VSGP 226 (330)
T ss_pred ccc--ccccC-CCEEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCC-----------------------CCHH
Confidence 101 11110 11256779999998 5578999986 4555544332211111 1122
Q ss_pred HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
..+++...+. ....++..++..+.++++.+.|++ . +++. .+...++++ .+.. . ..++.
T Consensus 227 ~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~--~~~~~~f~~--~~~~-~--------------~~~~~ 285 (330)
T PRK05664 227 TRWLAQAALADTPWQRRQRERLLAASQRLAALLRR-H-GLTP--AGGCALFQW--VRTE-D--------------AAALH 285 (330)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH-C-CCcc--cCCcceEEE--EecC-C--------------HHHHH
Confidence 2223333221 233456677777888999999998 4 5532 121223322 2111 0 23566
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.|.+.|+.+..+ .. .+++|+++.. ++++++++.+.|+++.++
T Consensus 286 ~~l~~~gi~v~~f---~~-~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 286 EFLARRGILTRLF---EQ-PASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHCCeEEEEC---CC-CCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 7788888665432 23 5799999432 678899999999987654
No 283
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.78 E-value=6.4e-16 Score=155.77 Aligned_cols=328 Identities=12% Similarity=0.058 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIG-WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g-~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
++...++.+.|.+++. .+-..+.|+++||+||..|++++|... ...|.++. +.+|......|.+...++...|
T Consensus 132 ~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~----~~~g~~~r--~~iI~~~~~yHG~t~~a~slsg 205 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYN----NALGRPNK--KKFIARSKSYHGSTLISASLSG 205 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHH----HhcCCCCC--cEEEEECCCccCChHhhhhccC
Confidence 4555666777777753 233468999999999999999998641 11232111 3356666678888766665554
Q ss_pred CCC---------CCeEEeeCCCCCCC-------------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 LGT---------DNCVEVPSDKRGRL-------------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~~---------~~v~~v~~~~~~~~-------------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
... ..+..++....++. ..++|++.+... ....+++|+++......|.+.| +
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl 283 (504)
T PLN02760 206 LPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYF 283 (504)
T ss_pred ChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHH
Confidence 311 11233332211110 124466665421 2235889999999888899888 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc--
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA-- 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~-- 320 (480)
++|.++|++||+++|+|+++.|+......+.. ...++ .+|+++ +.|.+++++ +.|+++++ +++.+.......
T Consensus 284 ~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~-e~~gv-~PDivt--lgK~lggG~~PigAv~~~-~~i~d~~~~~~~~~ 358 (504)
T PLN02760 284 EKIQAVLKKYDILFIADEVICAFGRLGTMFGC-DKYNI-KPDLVS--LAKALSSAYMPIGAVLVS-PEISDVIHSQSNKL 358 (504)
T ss_pred HHHHHHHHHcCCEEEecchhhCCcccchhhHH-HhcCC-CCcEEE--ecccccCCccccceEeec-HHHHhhhhcccccc
Confidence 99999999999999999999776554444443 44566 589887 569998764 68887765 344433211100
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--Ccee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~ 398 (480)
..+.+. .++ .+.+....++.++|+.+.. ++..++..++.++|.+.|++ +....++.+ -.+.
T Consensus 359 ~~~~h~----------~T~---~gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~v~~vrG~Gl 421 (504)
T PLN02760 359 GSFAHG----------FTY---SGHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKA-FSGSPIIGEIRGTGL 421 (504)
T ss_pred cCcccC----------CCC---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-HhcCCCeeeEEeCce
Confidence 000000 000 1112233334444444322 24577888888888888876 422222221 1223
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++.+.+....... +..... ..+...+.+.+.++|.++... .+.+|++ +...+|++|||++++++++.++
T Consensus 422 ~~gie~~~~~~~~-~~~~~~---~~~~~~i~~~~~~~Gvl~~~~------g~~lrl~-Ppl~it~eeid~~~~~l~~al~ 490 (504)
T PLN02760 422 ILGTEFVDNKSPN-DPFPAE---WGVGAYFGAECKKRGMLVRVA------GDNIMMS-PPLIITPEEVDELISIYGKALK 490 (504)
T ss_pred EEEEEEecCCccc-ccccch---hHHHHHHHHHHHhCCcEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHH
Confidence 4444443221000 000000 012356778888999654321 2578999 8899999999999999988765
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 491 ~ 491 (504)
T PLN02760 491 A 491 (504)
T ss_pred H
Confidence 3
No 284
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.78 E-value=3.7e-16 Score=155.26 Aligned_cols=302 Identities=14% Similarity=0.112 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC----
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG---- 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g---- 189 (480)
..++.+.++++.+.+ .+.|+++|++||..|++.+|.... ..+.. .+ +.+|......|.+...+....+
T Consensus 84 ~~~l~~~l~~~~~~~--~~~~~~sGseA~e~a~klar~~~~----~~~~~-~~-~~ii~~~~~~HG~~~~~~~~~~~~~~ 155 (403)
T PRK05093 84 ALRLAKKLIDATFAE--RVFFANSGAEANEAAFKLARRYAC----DRHGP-EK-TEIIAFHNSFHGRTLFTVSVGGQPKY 155 (403)
T ss_pred HHHHHHHHHhhCCCC--EEEEeCchHHHHHHHHHHHHHHHh----hcCCC-CC-CeEEEEcCCcCCchhhhHhhcCChhh
Confidence 346667788877654 699999999999999999986421 01100 01 3366667777887765544322
Q ss_pred ---CC--CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEee
Q psy12303 190 ---LG--TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVD 260 (480)
Q Consensus 190 ---~~--~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD 260 (480)
.. ...+..+|.+ |++++++.+.++ +++|+++..++..|.+.+ +++|.++|++||+++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~D 224 (403)
T PRK05093 156 SDGFGPKPADITHVPFN-----DLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFD 224 (403)
T ss_pred hhcCCCCCCCcEEeCCC-----CHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 11 1134445444 789999888643 888998865544454433 999999999999999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
++|++.......... ...++ ..|+.+ +.|.+++++..|+++.++ .+.+....... .. +
T Consensus 225 Ev~~g~g~~g~~~~~-~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~-~i~~~l~~~~~----~~-------------t 282 (403)
T PRK05093 225 EVQTGMGRTGDLFAY-MHYGV-TPDILT--SAKALGGGFPIGAMLTTA-EIASHFKVGTH----GS-------------T 282 (403)
T ss_pred chhhCCCCCccchhh-hhcCC-CCCEEE--ecccccCCcceEEEEEcH-HHHhhcCCCCC----CC-------------C
Confidence 999965332211111 12233 466554 679999778899998754 33332211000 00 0
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC-CceeEEEEEeecCccCCCchhhHH
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE-PEMVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
+ ++.+....++..+|+.+.. .+..++..++.+++.+.|++ +. .+.++.. +..+.+.+...+....
T Consensus 283 ~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~G~~~~~~l~~~~~-------- 349 (403)
T PRK05093 283 Y-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQK-INQKYGVFSEIRGMGLLIGAELKPQYK-------- 349 (403)
T ss_pred C-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHH-HHhhCCCeEeEeeCceEEEEEecCcch--------
Confidence 0 1111122223333333311 34557777888888888877 41 1112112 2233333222221100
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....++...+.++|+++... + .+++|++ ++..+++++|++++++|++++++
T Consensus 350 ----~~~~~~~~~l~~~Gv~v~~~----g-~~~lRl~-~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 350 ----GRARDFLNAAAEEGVMVLVA----G-PDVLRFA-PSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred ----hHHHHHHHHHHHCCeEEecC----C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 01245678888888554321 3 4799998 78888999999999999987754
No 285
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.78 E-value=1.8e-16 Score=156.86 Aligned_cols=168 Identities=18% Similarity=0.176 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch------hHHHHHHH
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY------SVRSCAAV 187 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~------s~~~~~~~ 187 (480)
...+.+.+++++|.+. .+++++|+.|+..++.+. . +|+ +|+++...|. ++...+..
T Consensus 124 ~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l-~--------------~Gd-eVIvs~~e~v~~ggs~~i~~~~~~ 185 (454)
T TIGR00474 124 YSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL-A--------------KGK-EVIVSRGELVEIGGSFRIPDVMEQ 185 (454)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-C--------------CcC-EEEECCChhhhhcchhhHHHHHHH
Confidence 3567788999999976 677888999988887442 1 445 7888877653 23345555
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc--c--cccChHHHHHHHHHcCcEEEeeccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL--G--AFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~--G--~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.|+ +++.++++ ...++++++++|+++ |++|++++.+|++ | .+.|+++|+++|++||+++++|++.
T Consensus 186 ~G~---~~~~v~~~--~~~~l~dle~aI~~~------T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~s 254 (454)
T TIGR00474 186 SGA---KLVEVGTT--NRTHLKDYEDAITEN------TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGS 254 (454)
T ss_pred cCC---EEEEeCCC--CCCCHHHHHHhcCcC------CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCC
Confidence 676 77777654 345899999999876 8999999998874 6 5789999999999999999999864
Q ss_pred cccccccccc---cCcccC--CCCCCccceeCccccCCCcccceEEEEeCchhhH
Q psy12303 264 GGGLLLSKKY---RHPRLT--GIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLI 313 (480)
Q Consensus 264 ~~~~~~~~~~---~~~~~~--~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~ 313 (480)
|... ....+ ..|.+. .-.++|++++|+|||+++|. .|+++.++ +.+.
T Consensus 255 G~l~-~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~-~~i~ 306 (454)
T TIGR00474 255 GSLV-DLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKK-ELIE 306 (454)
T ss_pred cccc-cchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECH-HHHH
Confidence 3310 10000 000100 01279999999999999885 67777654 4443
No 286
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.78 E-value=1.6e-16 Score=157.81 Aligned_cols=302 Identities=12% Similarity=0.063 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++.+.++++++.+ .+.|++||++||..|++++|.... ..+.. +...++......|.+...++...+..
T Consensus 81 ~~~~~la~~l~~~~~~~--~v~~~~sGseA~e~Alk~ar~~~~----~~~~~--~r~~ii~~~~~yHG~t~~~~~~~~~~ 152 (406)
T PRK12381 81 EPVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKYAH----DRYGS--HKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_pred HHHHHHHHHHHhhCCCC--eEEEcCCcHHHHHHHHHHHHHHHh----hcCCC--CCCeEEEECCCcCCcchhHHhhcCCc
Confidence 33455677788877653 699999999999999999986411 11110 11324555666777766555544421
Q ss_pred C---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc-c----cChHHHHHHHHHcCcEE
Q psy12303 192 T---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA-F----DPIEEIADICQKYNMWL 257 (480)
Q Consensus 192 ~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~-~----~~l~~I~~i~~~~~~~l 257 (480)
. ..+..+|.+ |+++|++.+++. +++|+++.. +++|. + ..+++|.++|++||+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aaviiEPv-~~~gg~~~~~~~~l~~l~~l~~~~~~ll 220 (406)
T PRK12381 153 KYSQDFAPLPPDIRHAAYN-----DLNSASALIDDQ------TCAVIVEPI-QGEGGVIPADKAFLQGLRELCDRHNALL 220 (406)
T ss_pred ccccCCCCCCCCeeEeCCC-----CHHHHHHhccCC------eeEEEEeCC-cCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 0 122333332 788999888643 788888755 55553 3 44899999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|.+.......+.. ...++ ..|+++ +.|.+++++..|+++.++ ++....... ....
T Consensus 221 I~DEv~tG~gr~G~~~~~-~~~~v-~pDi~t--~sK~l~gG~~ig~~~~~~-~~~~~~~~~----~~~~----------- 280 (406)
T PRK12381 221 IFDEVQTGVGRTGELYAY-MHYGV-TPDVLT--TAKALGGGFPIGAMLTTE-KCASVMTVG----THGT----------- 280 (406)
T ss_pred EEcchhhCCCCCcchhhh-HhhCC-CCCEEE--ehhhhhCCCceEEEEEcH-HHHhhcCCC----CCCC-----------
Confidence 999999765443222211 23344 467654 679998778889988653 343322110 0000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecCC-c-eeEEEEEeecCccCCCch
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILEP-E-MVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~~-~-~~~v~f~~~~~~~~~~~~ 414 (480)
++ ++.+.....+.++++.+. -.++.++..++.+++.+.|++ .. .+.++..+ . ..++.+.+.+ ..
T Consensus 281 --t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~vrg~Gl~~~~~l~~-~~----- 347 (406)
T PRK12381 281 --TY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNT-INARYGLFSEIRGLGLLIGCVLNA-EY----- 347 (406)
T ss_pred --CC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHH-HHhhCCCEEEEecCeEEEEEEecC-ch-----
Confidence 00 111122333334444432 234667888888888888877 41 22222222 1 2222232211 10
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
......+.+.+.++|.++... + .+.+|++ ++..+|++||++++++|++++++
T Consensus 348 -------~~~~~~~~~~l~~~Gv~v~~~----g-~~~lRl~-p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 348 -------AGKAKQISQEAAKAGVMVLIA----G-PNVVRFA-PALNISEEEITTGLDRFARACER 399 (406)
T ss_pred -------hhHHHHHHHHHHHCCcEEeeC----C-CCEEEEe-CCccCCHHHHHHHHHHHHHHHHH
Confidence 001245678888898655321 2 4689999 88889999999999999987654
No 287
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=6.7e-16 Score=154.52 Aligned_cols=316 Identities=15% Similarity=0.107 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.+.+.++.+.++++++-....+.|+++||+||..|++.||.. .|. +..|......|.+...+....+-
T Consensus 85 ~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~s~~~~ 152 (433)
T PRK08117 85 YESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHV-------TKR-----PYIISFTGCFHGRTLGALSVTTS 152 (433)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHh-------cCC-----CeEEEECCCcCCcCHHHHhhcCC
Confidence 345566777788887322246899999999999999999864 221 32566666778877666544321
Q ss_pred --------C--CCCeEEeeCCCCCC------------CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 191 --------G--TDNCVEVPSDKRGR------------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 191 --------~--~~~v~~v~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ...+..+|....++ -++++|++.++... .+..+++|+++......|.+.| ++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~ 231 (433)
T PRK08117 153 KSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLK 231 (433)
T ss_pred CccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHH
Confidence 0 11234455432111 14556676665321 1234889999999999999988 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
+|.++|++||+++++|++|+++......+.. ...++ .+|+++ +.|.+++++++|+++.++ ++....... .
T Consensus 232 ~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv-~pDi~t--~sK~lg~G~pigav~~~~-~i~~~~~~~---~-- 301 (433)
T PRK08117 232 KLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGV-VPDIMT--IAKGIASGLPLSAVVASK-ELMEQWPLG---S-- 301 (433)
T ss_pred HHHHHHHHcCCEEEEecchhccCccccchhH-hhcCC-CCCEee--hhhhccCCCcceeEEEcH-HHHhhccCC---C--
Confidence 9999999999999999999975433222111 12234 467654 789999778889888654 443322100 0
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC-Cce-eEEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE-PEM-VNVS 401 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~-~~~-~~v~ 401 (480)
+. . ++ .+.+....++.++++.+.. ....++..++.+++.+.|.+ +. .+.++.. +.. .++.
T Consensus 302 ~~----------~--T~-~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~~~~~vrg~Gl~~g 364 (433)
T PRK08117 302 HG----------T--TF-GGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEV-LKEKHPVIGDVRGIGLMIG 364 (433)
T ss_pred CC----------C--CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-HHhcCCceeeeecCCcEEE
Confidence 00 0 00 1111233334444444322 24556667777777777765 31 1111111 222 2223
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.++. ..... .....+.+.+.+.|.++.... .. .+++|++ ++..+|+++|++++++|.+.+++
T Consensus 365 i~~~~~~--~~~~~-------~~~~~~~~~l~~~Gv~~~~~g--~~-~~~lRl~-p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 365 IEIVDPD--GEPDG-------DAVEKILDKCLEKGLLFYLCG--NA-GNVLRMI-PPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred EEEecCC--CCcch-------HHHHHHHHHHHHCCCEEeecC--CC-CCEEEEe-CCccCCHHHHHHHHHHHHHHHHH
Confidence 3333221 00000 112456788889996654321 11 4799999 88999999999999999987654
No 288
>KOG1357|consensus
Probab=99.78 E-value=2.1e-17 Score=154.15 Aligned_cols=345 Identities=15% Similarity=0.096 Sum_probs=224.3
Q ss_pred cCCCCCccccccCCCChHHhHHHHHHHH-cCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHH
Q psy12303 69 RTGHPMFMNQLSCGLDVVSMAGEWLIAT-ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 69 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~ 147 (480)
+.++.+|+++..+.........+.+..+ ++... .....+..+..+++.+.+|+++|.+. ..+|.. |-..|.+.+-
T Consensus 140 NlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~cs--s~~e~G~~~~hkelE~l~A~f~g~e~-a~vF~m-Gf~TNs~~~p 215 (519)
T KOG1357|consen 140 NLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCS--SRHEAGTTEEHKELEELVARFLGVED-AIVFSM-GFATNSMNIP 215 (519)
T ss_pred eecccccccccccCCcCChHHHHHHHHhcccccc--cchhcccHHHHHHHHHHHHHhcCCcc-eEEEec-cccccccCcc
Confidence 3457789998755444433333444432 22221 12233446777788899999999976 344444 4444544444
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC-----
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG----- 222 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~----- 222 (480)
+... ||. .|+..+..|.|+...|++.|. .++....| |..+||+.|++....|
T Consensus 216 ~l~~--------------~gs-LIiSDelNHaSi~~GaRLSgA---tiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Th 272 (519)
T KOG1357|consen 216 SLLG--------------KGS-LIISDELNHASLITGARLSGA---TTRVFRHN-----DMQGLERLLRDAIVYGQPKTH 272 (519)
T ss_pred eeec--------------CCc-ceeeccccchheeccccccCc---eEEEEecC-----CHHHHHHHHHHHHhcCCCCcC
Confidence 4433 323 788899999999999999998 77888887 8899999999887554
Q ss_pred --CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc-cc--ccCcccCCCCCCccceeCccccCCC
Q psy12303 223 --DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS-KK--YRHPRLTGIERADSVTWNPHKLMGT 297 (480)
Q Consensus 223 --~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~-~~--~~~~~~~~~~~~D~~~~s~hK~~~~ 297 (480)
.+..+|++....++-|.++++.++.+++|++..+++.|+||+.+++.. .. ..+ ...+-+++|++...+-|.+++
T Consensus 273 rp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~-~g~d~~dvDImMGtftKSfga 351 (519)
T KOG1357|consen 273 RPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEY-FGVDPEDVDIMMGTFTKSFGA 351 (519)
T ss_pred CcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeec-cCCCchhheeecceehhhccc
Confidence 233577888888899999999999999999999999999999998721 11 011 112234789999999999986
Q ss_pred cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh----cHHHHHHHHHHHHH
Q psy12303 298 LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK----GDEGFEKQIDRLME 373 (480)
Q Consensus 298 p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~----g~~~~~~~~~~~~~ 373 (480)
+|..+...+.+.+......+.-..... .+. .-+-....+++.+ |.+.-++.+++..+
T Consensus 352 ---~GGyiagsk~lid~lrt~s~~~~yat~---------------~sp-pvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 352 ---AGGYIAGSKELIDYLRTPSPSALYATS---------------LSP-PVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred ---ccceecCcHHHHhhhccCCCceeeccc---------------CCh-HHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 566666666555443322221111100 000 1111222233322 45566888999999
Q ss_pred HHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--CCcccE
Q psy12303 374 LAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--NDLPNF 451 (480)
Q Consensus 374 l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--~~~~~~ 451 (480)
++.+++..|++ .||.++++..+..+-..+.++... ..+.+.|.+++..++..+.. .-....
T Consensus 413 ns~yfr~~l~~--~gfivyG~~dSpVvplll~~~~k~---------------~~f~r~~l~~nigvVvvgfPatpl~e~r 475 (519)
T KOG1357|consen 413 NSRYFRWELQK--MGFIVYGNNDSPVVPLLLYGPAKI---------------VAFSREMLERNIGVVVVGFPATPLLESR 475 (519)
T ss_pred hhHHHHHhhhc--CcEEEecCCCCCcceeeecCcccc---------------cHHHHHHHhcCceEEEEeCCCchHHHhH
Confidence 99999999999 799998876655444433322211 13445666666443332111 111356
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 452 FRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 452 ~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.|+| .+..+|.|+++++++.+.+..+
T Consensus 476 ~R~c-~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 476 ARFC-LSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred HHhh-hcccccHHHHHHHHHHHhhhch
Confidence 7999 8889999999999999988754
No 289
>PRK06062 hypothetical protein; Provisional
Probab=99.78 E-value=8.5e-16 Score=153.55 Aligned_cols=320 Identities=14% Similarity=0.066 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.+...++.+.+++++..+-..+.|+++||+|+..|++.||.. .|. +.+|......|.....+....+.
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~als~~~~ 161 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLH-------TGR-----PKVLSAYRSYHGGTGSAINLTGD 161 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHh-------hCC-----ceEEEEeCCCCCCCHHHHhhcCC
Confidence 455566778888887543357999999999999999999875 221 22444555667766666655432
Q ss_pred C--------CCCeEEeeCCCCCC------CC-------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHH
Q psy12303 191 G--------TDNCVEVPSDKRGR------LI-------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEE 245 (480)
Q Consensus 191 ~--------~~~v~~v~~~~~~~------~d-------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~ 245 (480)
. ...+..++.....+ -| +++|++.++.. .+..+++|+++......|.+.| +++
T Consensus 162 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~ 239 (451)
T PRK06062 162 PRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAG 239 (451)
T ss_pred cccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHH
Confidence 1 01223333221111 12 56677777531 1245899999999998999988 999
Q ss_pred HHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
|.++|++||+++|+|++++++......+.. ...|+ .+|+++ +.|.+++++ ++|+++.++ ++.+.... ..+.
T Consensus 240 lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~-~~~gv-~PDi~t--~gK~lggG~~Pigav~~~~-~i~~~~~~--~~~~- 311 (451)
T PRK06062 240 VRELCDRHGIVLIADEVMAGFGRTGKWFAI-EHFGV-VPDLIT--FAKGVNSGYVPLGGVAISE-AIAATFAD--RPYP- 311 (451)
T ss_pred HHHHHHHcCCEEEeeccccCCCcCcHHHHH-HhcCC-CCCeee--echhhhcCCcCcEEEEEcH-HHHHHhcc--CCCC-
Confidence 999999999999999999986554433333 34456 689888 579999875 788888765 44443211 1111
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhcC---CCCeEEecCCceeEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELA-EYMVKKIKSM---PDKFYLILEPEMVNV 400 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~-~~l~~~l~~~---~~g~~~~~~~~~~~v 400 (480)
+. . ++ .+.+....++.++|+.+..+. ..++..++. ++|.+.|++. .+.+.-+ .-...++
T Consensus 312 ~~----------~--T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~v-rG~Gl~~ 374 (451)
T PRK06062 312 GG----------L--TY-SGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEV-RGLGVFW 374 (451)
T ss_pred CC----------C--CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeE-eccccEE
Confidence 10 0 00 111223334444454443332 445555555 3555555441 3322111 1223334
Q ss_pred EEEeecCcc-C-CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 401 SFWYLPTRV-R-NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 401 ~f~~~~~~~-~-~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.+..... . ........ ......+.+.+.++|.++... .+.+|++ +...+|++|||++++++++.++
T Consensus 375 gve~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gvl~~~~------~~~lrl~-ppl~~t~~eid~~~~~l~~~l~ 444 (451)
T PRK06062 375 ALELVADRETREPLAPYGAS---SAAMAAVKAACKERGLLPFVN------GNRIHVV-PPCTVTEDEVREGLAILDAALA 444 (451)
T ss_pred EEEEcccccccCCCcccchh---hHHHHHHHHHHHHCCcEEeec------CCEEEEE-CCccCCHHHHHHHHHHHHHHHH
Confidence 444432110 0 00000000 012346778889999653221 3689998 8889999999999999998876
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 445 ~ 445 (451)
T PRK06062 445 V 445 (451)
T ss_pred H
Confidence 4
No 290
>PRK08354 putative aminotransferase; Provisional
Probab=99.78 E-value=1.8e-16 Score=151.94 Aligned_cols=149 Identities=14% Similarity=0.082 Sum_probs=112.7
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
.+++++++.+|. ++++|+|+++++..++.... +|+ .|++..++|+.+..+++.+|. ++
T Consensus 44 ~l~~~ia~~~~~---~I~vt~G~~~al~~~~~~~~---------------~gd-~vlv~~P~y~~~~~~~~~~g~---~~ 101 (311)
T PRK08354 44 WLEEEFSKLFGE---PIVITAGITEALYLIGILAL---------------RDR-KVIIPRHTYGEYERVARFFAA---RI 101 (311)
T ss_pred HHHHHHHHHHCC---CEEECCCHHHHHHHHHHhhC---------------CCC-eEEEeCCCcHHHHHHHHHcCC---EE
Confidence 356778888873 59999999999876664321 335 788999999999999999998 66
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~ 272 (480)
+.++ +|++.|++.+++ ++++++++|+||||.+.+ +++|.++|+++|+|+++|++|..+......
T Consensus 102 ~~~~------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~ 168 (311)
T PRK08354 102 IKGP------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES 168 (311)
T ss_pred eecC------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc
Confidence 5543 578888887652 567889999999999976 566777789999999999999876542110
Q ss_pred ccCcccCCCCCCccceeCccccCC-CcccceEEEE
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHF 306 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~ 306 (480)
. . ..--+++.|+.|.++ .+..+|+++.
T Consensus 169 --~-~----~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 169 --P-E----GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred --c-C----CCcEEEEeccHhhcCCccceeeeeee
Confidence 1 0 122356678999998 4478898886
No 291
>PRK12403 putative aminotransferase; Provisional
Probab=99.77 E-value=1.5e-15 Score=152.08 Aligned_cols=326 Identities=13% Similarity=0.110 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g 189 (480)
.....++.+.++++++.+-..++|+++||+||..|++.+|... ...|. +++.+|+. ....|.+...++...|
T Consensus 97 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~~~~s~s~ 169 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYW----QVLGK---PQKKIMIGRWNGYHGSTLAATALGG 169 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhhCC---CCCcEEEEECCCcCcccHhhhhcCC
Confidence 4555667788888886433469999999999999999998641 11222 22324433 4446888776666554
Q ss_pred CCC--------CCeEEeeCCCCC----CC--------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHH
Q psy12303 190 LGT--------DNCVEVPSDKRG----RL--------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEE 245 (480)
Q Consensus 190 ~~~--------~~v~~v~~~~~~----~~--------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~ 245 (480)
... ..+..+|....+ .+ +.++|++.+.+. ....+++|+++..+...|.+.| +++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~ 247 (460)
T PRK12403 170 MKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPE 247 (460)
T ss_pred CccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHH
Confidence 321 123344422111 11 124455555432 1234889999999888898877 999
Q ss_pred HHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
|.++|++||+++|+|++++++......+.. ...|+ ..|+++ +.|.+++++ ++|++++++ ++.+........+..
T Consensus 248 lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~-e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~-~i~~~~~~~~~~~~~ 322 (460)
T PRK12403 248 IQRICRQYDVLLCADEVIGGFGRTGEWFAH-EHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSK-RIAEALVEQGGVFAH 322 (460)
T ss_pred HHHHHHHcCCEEEEeccccCCCcCchhhhh-hhcCC-CCCeEE--EcccccccccceEEEEECH-HHHHHHhcCCCcccc
Confidence 999999999999999999877555444333 34456 579998 679998875 788888653 443332111111111
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC---CCCeEEecCCceeEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLM-ELAEYMVKKIKSM---PDKFYLILEPEMVNV 400 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~-~l~~~l~~~l~~~---~~g~~~~~~~~~~~v 400 (480)
.. ++ .+.+....++.++|+.+-.+. ..++.. ++.++|.+.|++. .+-+.-+ .-.+.++
T Consensus 323 ~~-----------T~---~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rG~Gl~~ 384 (460)
T PRK12403 323 GL-----------TY---SGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEV-QGAGLVA 384 (460)
T ss_pred CC-----------CC---CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eecceEE
Confidence 10 00 111123333444454443332 345554 5666666666530 2222211 1223344
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+............. ..+...+...+.++|.++... .+.+|++ +....|++||+++++++++.+++
T Consensus 385 gie~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Gll~~~~------~~~~~l~-Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 385 ALQFAEDKATRKRFANE----NDLAWRCRTIGFEEGVIIRST------LGRMIMA-PALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred EEEEccCccccccccch----hHHHHHHHHHHHhCCEEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 44443221110000000 011234667778899554321 2468998 88899999999999999987754
No 292
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.77 E-value=9.5e-16 Score=152.82 Aligned_cols=319 Identities=15% Similarity=0.108 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+.+.++.+.+++++...-..+.|+++||+|+..|++.||... ..+|. +++. +|......|.....+....|.
T Consensus 89 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~gals~tg~ 161 (442)
T PRK13360 89 PKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYH----RARGE---GSRTRLIGRERGYHGVGFGGISVGGI 161 (442)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEEcCCcCCccHhhhhccCC
Confidence 445567788888874322469999999999999999998741 11121 1222 444555566655444433331
Q ss_pred C---------CCCeEEeeCCCC-----CCC--------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 191 G---------TDNCVEVPSDKR-----GRL--------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~-----~~~--------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ...+..+|...+ +.. ..++|+++++.. .+..+.+|++...+...|.+.| ++
T Consensus 162 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~ 239 (442)
T PRK13360 162 VPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQ 239 (442)
T ss_pred hhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHH
Confidence 1 112344443311 111 145677777532 2245889999999999999988 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc---
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA--- 320 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~--- 320 (480)
+|.++|++||+++++|+++.++......+.. ...++ .+|+++ +.|.++++ .++|+++.++ ++.+.......
T Consensus 240 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~-~~~gv-~PDivt--~gK~l~gG~~P~gav~~~~-~i~~~~~~~~~~~~ 314 (442)
T PRK13360 240 RLREICDKHGILLIFDEVITGFGRLGAPFAA-QYFGV-TPDLLT--CAKGLTNGAIPMGAVFVSS-EIHDAFMQGPEAGI 314 (442)
T ss_pred HHHHHHHHcCCEEEEechhhCCCCCccchhh-hhcCC-CCceee--eeeccccCccceEEEEEcH-HHHHHhhcCCcccc
Confidence 9999999999999999999765443333333 33455 589887 57998865 4688877654 34332211100
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-ee-
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-MV- 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-~~- 398 (480)
.++.. .++ .+.+....++.++|+.+..+ ...++..++.++|.+.|++ +..+..+.+.. .+
T Consensus 315 ~~~~~-------------~T~-~g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~-l~~~~~v~~vrG~Gl 376 (442)
T PRK13360 315 EFFHG-------------YTY-SGHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHS-LRDAPHVIDIRNLGL 376 (442)
T ss_pred ccccC-------------CCC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH-hhcCCCeeeeeccce
Confidence 01100 011 12222333444445544333 3567778888888888876 43222222211 11
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
...+.+.+..... .+ ...++...+.++|.++ .. . .+.+|++ ++..+|++|||+++++|++.++
T Consensus 377 ~~~~~l~~~~~~~---~~-------~~~~~~~~l~~~Gvl~-~~----~-~~~lr~~-Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 377 VGAVELAPRDGKP---GK-------RAYEVFLKCFEKGLMI-RY----T-GDILALS-PPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred EEEEEEecCCCCc---ch-------hHHHHHHHHHHCCcEE-Ee----c-CCEEEEe-CCCccCHHHHHHHHHHHHHHHH
Confidence 1222222211100 00 1235667888888544 32 1 3589999 9999999999999999999876
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 440 ~ 440 (442)
T PRK13360 440 E 440 (442)
T ss_pred H
Confidence 5
No 293
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.77 E-value=3.9e-16 Score=151.17 Aligned_cols=272 Identities=11% Similarity=0.005 Sum_probs=178.0
Q ss_pred HHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++++++.+|.++ +++++|+|+++++.... .+.. ||+ |++..++++.+..+++..|.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~~~~--------------~g~--v~v~~P~y~~y~~~~~~~g~--- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-ALLP--------------RGR--VGIAPLAYSEYAPAFARHGH--- 115 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-HhcC--------------CCe--EEEcCCCcHHHHHHHHHCCC---
Confidence 567888999999964 79999999999886443 2221 434 66688899999999999998
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH---HHHcCcEEEeecccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI---CQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i---~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++.+. +. +.+. ++++++++|+||||.+.+.+++.++ |++++.++++|++|..+...
T Consensus 116 ~~~~v~~~~------~~----~~~~------~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~- 178 (339)
T PRK06959 116 RVVPLDEAA------DT----LPAA------LTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA- 178 (339)
T ss_pred EEEeecccc------hh----cccc------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-
Confidence 777777653 11 2222 4589999999999999886666555 56789999999999876421
Q ss_pred ccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
+.... .. ..++ -++..|++|.++ .+..+|+++. ++++++.......+|. ...
T Consensus 179 ~s~~~-~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~l~~~~~~~~-----------------------vs~ 231 (339)
T PRK06959 179 ASLAA-HT-DRPG-LVVLRSVGKFFGLAGVRAGFVLA-APALLAALRDALGAWT-----------------------VSG 231 (339)
T ss_pred ccchh-cc-CCCC-EEEEecChhhcCCcchheEEEec-CHHHHHHHHHhcCCCC-----------------------CcH
Confidence 11111 11 1111 256679999998 5578999886 4555554433222221 112
Q ss_pred hHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+...++...+. .+..++..++..+.++++.+.|++ . |+++. + .+++++...+ . ..++
T Consensus 232 ~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~--~-~~~f~~~~~~-~----------------~~~l 289 (339)
T PRK06959 232 PARHAVRAAFADAAWQAAMRERLAADGARLAALLRA-H-GFAVH--A-TPLFSWTDDP-R----------------AAAL 289 (339)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCcc--C-cceEEEEeCC-C----------------HHHH
Confidence 23333333332 344566778888889999999999 4 77664 2 2334332111 1 2356
Q ss_pred HHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|.++|+.+..+ .. .+++|+++ ..+.+++++++++|+++.+.
T Consensus 290 ~~~l~~~GI~vr~~---~~-~~~lRisi---~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 290 HAALARRGIWTRYF---AP-PPSVRFGL---PADEAEWQRLEDALAECVPT 333 (339)
T ss_pred HHHHHhCCeEEEEC---CC-CCeEEEEC---CCCHHHHHHHHHHHHHHHHH
Confidence 78888898655332 22 46999993 23678999999999987654
No 294
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.77 E-value=8.9e-16 Score=152.15 Aligned_cols=310 Identities=14% Similarity=0.103 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCeEE-CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQG---GDSIL-APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~---~~~~~-t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
.+...++.+.+++++..+. ..+.| +++||+|+..|++.||.. +|. +.+|......|.....+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV-------TGR-----SNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhh-------cCC-----CeEEEECCCcCCchHHHHH
Confidence 4555567777777653221 13556 589999999999999864 221 2244455566777666665
Q ss_pred HcCC-------C--CCCeEEeeCCCCCC---CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 187 VCGL-------G--TDNCVEVPSDKRGR---LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 187 ~~g~-------~--~~~v~~v~~~~~~~---~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
..+. + ...+..+|...... -+++.+++.+++.......+++|++...+.+.|.+.+ +++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 5432 1 12345555432111 2466788877643211134789999999998888533 89999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
++||+++++|++++|+......+.. ...++ .+|++++ .|++++ ++++|++++++. . .... ... +.
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~-~~~~v-~PDi~~~--~K~lg~~G~pigav~~~~~-~-~~~~---~~~--~~--- 290 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSF-EPAGI-EPDIVCL--SKSISGYGLPLALTLIKPE-L-DVWK---PGE--HN--- 290 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHh-cccCC-CCCEEEe--chhccCCccceeEEEEchh-h-hccC---CCc--cC---
Confidence 9999999999999876443333222 23344 6898875 499987 788999998654 2 2111 100 00
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhc---CCCCeEEecCCceeEE-EEEe
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRA-KGDEGFEKQIDRLMELAEYMVKKIKS---MPDKFYLILEPEMVNV-SFWY 404 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~-~g~~~~~~~~~~~~~l~~~l~~~l~~---~~~g~~~~~~~~~~~v-~f~~ 404 (480)
.++ .+.......+.+++.. +..+. ..++..++.+++.+.|++ ..+++.. ..+..+.+ .+.+
T Consensus 291 -------~T~---~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~-~vrg~Gl~~~l~l 356 (412)
T TIGR02407 291 -------GTF---RGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIK-QVRGRGLMQGIEC 356 (412)
T ss_pred -------CCC---CccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceE-eeecceeEEEEEe
Confidence 001 1111122233444553 33333 345555555555555543 0443322 22223333 3332
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. .. .....+.+.+.++|+++... .. . .+.+|++ ++..+|++|++++++.|++.+++
T Consensus 357 ~-~~--------------~~~~~~~~~~~~~Gv~v~~~-~~-~-~~~lr~~-p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 357 G-DG--------------DLAGKIAKAAFENGLIIETS-GP-N-DEVIKLL-PPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred c-Ch--------------HHHHHHHHHHHHCCCEEecc-CC-C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHhC
Confidence 1 11 01246778888999654332 11 1 3689999 99999999999999999998764
No 295
>PLN02452 phosphoserine transaminase
Probab=99.77 E-value=1.1e-16 Score=154.74 Aligned_cols=336 Identities=14% Similarity=0.086 Sum_probs=211.1
Q ss_pred CccccccCCCC-hHHhHHHHHHHHcCcCC-----c-chhcChhhHHHHHHHHHHHHHHhCCCC-CCe-EECCChhHHHHH
Q psy12303 74 MFMNQLSCGLD-VVSMAGEWLIATANTNM-----F-TYEIAPVFILMETVVLEKMRQIIGWQG-GDS-ILAPGGSISNLY 144 (480)
Q Consensus 74 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~-----~-~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~-~~t~ggt~a~~~ 144 (480)
+-+++.++|.. |..++..+....+|... . ....++-+.++-+++++.+.++++.|+ ..+ +++.|||.++..
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 44566666644 45666555555544221 0 112367778888899999999999964 344 556888887777
Q ss_pred HHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHH
Q psy12303 145 AFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKA 220 (480)
Q Consensus 145 al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~ 220 (480)
++..+.. +|+...++. ...++ +.+.++.+|. ..++...-..+ ...++++++ .+
T Consensus 87 ~~~nl~~--------------~~~~~l~~~-~G~fg~r~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~----~~-- 143 (365)
T PLN02452 87 IPLNLCK--------------PGDKADFVV-TGSWSKKAAKEAKKYCK--TNVIASGKDEKYTKIPSVSEWE----LT-- 143 (365)
T ss_pred HHHhcCC--------------CCCeEEEEE-CCHHHHHHHHHHHHhCC--CcEEEecCCCCCCCCCChHHcC----CC--
Confidence 7766543 334344444 34444 4455566664 13322111111 135665542 11
Q ss_pred CCCccEEEEeccCCCcccc-ccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc
Q psy12303 221 KGDIPFFVNCTSGTTVLGA-FDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL 299 (480)
Q Consensus 221 ~~~~~~~v~~~~~~~~~G~-~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~ 299 (480)
..+..|.+++..|.+|. +.|++++.+ +.++||++.+.+..+.+..++ ++|+ .+.||.++ |.
T Consensus 144 --~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~~-------~v~~--~saqK~lG-P~ 205 (365)
T PLN02452 144 --PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSKY-------GVIY--AGAQKNVG-PS 205 (365)
T ss_pred --CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHHc-------CEEE--EecccccC-CC
Confidence 22789999999999999 588888753 799999999999998888777 6665 58999996 99
Q ss_pred cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHH
Q psy12303 300 QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEY 377 (480)
Q Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~ 377 (480)
|.|+++++++.+ .......+.|+..... ....+...+-+ +...++..+++.+-.+ |++.+.+++++++++
T Consensus 206 Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~-------~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~ 277 (365)
T PLN02452 206 GVTIVIIRKDLI-GNARPITPGMLDYKIH-------AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADL 277 (365)
T ss_pred CeEEEEEcHHHH-hhcccCCCchhhHHHH-------HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 999999876543 3332222333211100 00001111111 2344555666666555 799999999999999
Q ss_pred HHHHHhcCCCCeEEe-cCC---ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEE
Q psy12303 378 MVKKIKSMPDKFYLI-LEP---EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFR 453 (480)
Q Consensus 378 l~~~l~~~~~g~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R 453 (480)
+++.|++ .+|+... .++ ...+++|...... + .+++.+.+.++|.+.+.. ... .+-+|
T Consensus 278 l~~~l~~-~~G~y~~~~~~~~rs~~~vsF~~~~~~------------~---~~~f~~~~~~~g~~~~~G--~r~-~gg~R 338 (365)
T PLN02452 278 LYDAIDE-SNGFYVCPVEKSVRSLMNVPFTLGGSE------------L---EAEFVKEAAKAGMVQLKG--HRS-VGGMR 338 (365)
T ss_pred HHHHHHh-CCCcccCCCChHHhCCeEEEEEcCCch------------h---HHHHHHHHHHCCCcccCC--ccc-cCceE
Confidence 9999999 7887221 111 2235666532111 1 357788888999654432 222 22399
Q ss_pred EecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 454 NIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 454 ~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++ +....+.++|+.|++.+++..+
T Consensus 339 ~s-~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 339 AS-IYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred EE-CcCCCCHHHHHHHHHHHHHHHH
Confidence 99 7778899999999999998765
No 296
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.9e-16 Score=143.66 Aligned_cols=242 Identities=18% Similarity=0.149 Sum_probs=167.5
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch----h
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY----S 180 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~----s 180 (480)
-+.|....+|+. ++.+=|-- ..+.+.+|..|..+++..... +|| .|+.+..-|. -
T Consensus 59 i~NPT~~vlE~R----iAaLEGG~--aa~a~aSG~AA~~~ai~~la~--------------aGD-~iVss~~LYGGT~~l 117 (426)
T COG2873 59 IMNPTTDVLEER----IAALEGGV--AALAVASGQAAITYAILNLAG--------------AGD-NIVSSSKLYGGTYNL 117 (426)
T ss_pred ccCchHHHHHHH----HHHhhcch--hhhhhccchHHHHHHHHHhcc--------------CCC-eeEeeccccCchHHH
Confidence 356777777776 55553322 367888999999999987765 567 5555543333 2
Q ss_pred HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEee
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVD 260 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD 260 (480)
+......+|+ ++++|..+ |++.++++|+++ |++|.+....||.+.+.|+++|+++|+++|++++||
T Consensus 118 f~~tl~~~Gi---~v~fvd~~-----d~~~~~~aI~~n------Tkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVD 183 (426)
T COG2873 118 FSHTLKRLGI---EVRFVDPD-----DPENFEAAIDEN------TKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVD 183 (426)
T ss_pred HHHHHHhcCc---EEEEeCCC-----CHHHHHHHhCcc------cceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEe
Confidence 4445566777 89998876 899999999998 999999999999999999999999999999999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcc--cC-C
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR--YD-T 336 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~-~ 336 (480)
...+.+++ +...++ ++|+++-|..||+++- ...|.+++..... .-.....-+.+...+..+.+. .+ +
T Consensus 184 NT~atpyl-~rP~~h-------GADIVvHS~TK~igGhGt~iGG~iVD~G~F-Dw~~~~rfP~~~~p~p~YhGl~~~~~~ 254 (426)
T COG2873 184 NTFATPYL-CRPIEH-------GADIVVHSATKYIGGHGTAIGGVIVDGGKF-DWTANGRFPEFTTPDPSYHGLVYTETF 254 (426)
T ss_pred cCCCccee-cchhhc-------CCCEEEEeecccccCCccccceEEEeCCcc-ccccCCCCcccCCCCccccceehhhhc
Confidence 99998844 444466 9999999999999864 3467777654422 111122223333322222211 00 1
Q ss_pred CCc----------cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 337 GDK----------VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 337 ~~~----------~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
+.. --..|...+...+|..++ |.|.+.-+++|+.+++..+.+.|++ +|.+..+.
T Consensus 255 g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~-HpkV~~V~ 318 (426)
T COG2873 255 GNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLEN-HPKVAWVN 318 (426)
T ss_pred ccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhc-CCCeeeee
Confidence 110 000111123445555443 6888899999999999999999999 89887765
No 297
>PLN02397 aspartate transaminase
Probab=99.76 E-value=3.2e-16 Score=156.26 Aligned_cols=307 Identities=13% Similarity=0.049 Sum_probs=189.2
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCCC--CCCe--EECCChhHH--HHHHHHHHHHhcCchhHhcCCCccCCceEEEecC
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGWQ--GGDS--ILAPGGSIS--NLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD 175 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~--~~t~ggt~a--~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~ 175 (480)
..|....+..++.+.+.+|+.+..+.+ +..+ .-+.+|+.+ +..++.+..+ ||+ .|++++
T Consensus 85 ~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~--------------pGd-~Vlv~~ 149 (423)
T PLN02397 85 KEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFY--------------PGS-TIYIPN 149 (423)
T ss_pred CCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhC--------------CCC-EEEEeC
Confidence 357777777888888777775442211 2222 113344433 3333333322 656 899999
Q ss_pred CCchhHHHHHHHcCCCCCCeEEeeC-C-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH
Q psy12303 176 QCHYSVRSCAAVCGLGTDNCVEVPS-D-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC 250 (480)
Q Consensus 176 ~~h~s~~~~~~~~g~~~~~v~~v~~-~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~ 250 (480)
++|+.+...++..|. +++.+|. + +++.+|++.+++.+++. ..++++++.++++||||.+.+ +++|+++|
T Consensus 150 P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a 223 (423)
T PLN02397 150 PTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLI 223 (423)
T ss_pred CCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999998 7888887 3 34789999999888643 123789999999999999965 67788899
Q ss_pred HHcCcEEEeeccccccccccc--cccC-cccCCCCCCccceeCccccCCC-cccceEEE--EeCchhhHhhhcCCccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSK--KYRH-PRLTGIERADSVTWNPHKLMGT-LLQCSTIH--FKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~--~~~~-~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~--~~~~~~~~~~~~~~~~~l~ 324 (480)
++||+++++|++|........ .... ........--+++.|++|.++. +..+|+++ ..+...+............
T Consensus 224 ~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~ 303 (423)
T PLN02397 224 KSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIAR 303 (423)
T ss_pred HhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 999999999999988764210 0000 0111110112556699999994 57899985 3344332211100000000
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcCCCC----eEEe
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD--------EGFEKQIDRLMELAEYMVKKIKSMPDK----FYLI 392 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~--------~~~~~~~~~~~~l~~~l~~~l~~~~~g----~~~~ 392 (480)
... .+ ...+...++...+.. +.++++.++..+.++.+.+.|++ + + +.+
T Consensus 304 ~~~---------------~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~-~-~~~~~~~~- 363 (423)
T PLN02397 304 PMY---------------SN--PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEA-R-GSPGDWSH- 363 (423)
T ss_pred ccc---------------CC--CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCCCCCCc-
Confidence 000 00 111222222222211 22567778888999999999998 5 5 554
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHH
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTE 472 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~ 472 (480)
..|+.+.++|.-. . .++.++|.++..+++.. .+ |+++.+ .+++++++++++
T Consensus 364 ~~p~gg~fl~~~l----~---------------~~~~~~Ll~~~~V~v~~------~~--Ri~~~~--~~~~~i~~~~~~ 414 (423)
T PLN02397 364 ITKQIGMFSFTGL----N---------------KEQVDRMTKEYHIYMTR------DG--RISMAG--LSSKNVPYLADA 414 (423)
T ss_pred ccCCceEEEecCC----C---------------HHHHHHHHHhCCEEECC------CC--eEEEee--CCHHHHHHHHHH
Confidence 3588888877321 1 23556665554454432 23 998543 589999999999
Q ss_pred HHHhhc
Q psy12303 473 MDRLGH 478 (480)
Q Consensus 473 l~~~~~ 478 (480)
|+++++
T Consensus 415 i~~~~~ 420 (423)
T PLN02397 415 IHAVVT 420 (423)
T ss_pred HHHHHh
Confidence 998865
No 298
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.1e-15 Score=150.47 Aligned_cols=292 Identities=15% Similarity=0.083 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
..++.++.+.++ +.+...++|++|||+||..|++.++.. .| ++.+|......|.+...++...|.
T Consensus 69 ~~~~~~la~~l~---~~~~~~~~~~~SGseA~~~Al~~ar~~-------~~-----~~~vv~~~~~yHg~~~~~~~~~~~ 133 (375)
T PRK04260 69 NSLQEEVAQKLI---GDKDYLAFFCNSGAEANEAAIKIARKA-------TG-----KQEIITFQNSFHGRTFGSMSATGQ 133 (375)
T ss_pred CHHHHHHHHHHh---cCcCCEEEEcCccHHHHHHHHHHHHHh-------cC-----CCeEEEECCCcCcccHHHHhccCC
Confidence 445555444332 222224689999999999999999763 11 133555667779887777655443
Q ss_pred CCC---------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GTD---------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~~---------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
... .+...+ ..|++++++.++++ +++|+++.+++++|.+.+ +++|.++|+++|+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~-----~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~ 202 (375)
T PRK04260 134 DKIKDGFGDGVPHFSYAI-----FNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILL 202 (375)
T ss_pred cccCCCCCCCCCCeEEeC-----CCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 110 111111 13889999888543 789999999999998855 899999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|.+.......... ...++ ..|++ +++|.++.+.+.|+++.++ +........ .+. .
T Consensus 203 i~De~~~g~g~~g~~~~~-~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~-~~~~~~~~~--~~~-------------~ 262 (375)
T PRK04260 203 IVDEVQTGMGRTGKLYAF-EHYGI-EPDIF--TLAKGLANGVPVGAMLAKS-SLGGAFGYG--SHG-------------S 262 (375)
T ss_pred EEechhhCCCcccchhhh-HhhCC-CCCEE--EecccccCCcceEEEEEcH-HHHhhcCCC--CCC-------------C
Confidence 999999764332211111 12334 46765 4789998667889998764 333221100 000 0
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhh
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 416 (480)
++ .+.+....++...+..+..+. .++..+....+.+.+.+.+.+ .+.+.-+. .....+.+.+ +..
T Consensus 263 t~---~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-~~g~~~~~~~-~~~-------- 328 (375)
T PRK04260 263 TF---GGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD-KETVTTVR-GLGYMIGIET-TAD-------- 328 (375)
T ss_pred CC---CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEe-ccceEEEEEe-cCc--------
Confidence 00 111122233334444332222 233334444444555555555 33333221 1222333322 111
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.+.+.|..+... + .+.+|++ ++..++++||+++++.|+++
T Consensus 329 --------~~~~~~~l~~~Gi~v~~~----~-~~~lR~~-~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 329 --------LSQLVEAARDKGLIVLTA----G-TNVIRLL-PPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred --------HHHHHHHHHhCCCEEecC----C-CCEEEEc-CCCccCHHHHHHHHHHHHHh
Confidence 235678888899655332 3 4789999 88889999999999999875
No 299
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=2.7e-15 Score=149.57 Aligned_cols=315 Identities=15% Similarity=0.074 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
+...++.+.++++++.....+.|+++||+|+..|++.||.. .|. +.++-.....|.....+....|..
T Consensus 84 ~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~a~s~~~~~ 151 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAY-------TKR-----RKILSYLRSYYGSTYGAMSLTGLD 151 (443)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHh-------cCC-----CeEEEEeCCcCCcCHHHHHhcCCC
Confidence 44556777888887654357999999999999999999874 221 223344445676655555544421
Q ss_pred ---------CCCeEEeeCCCCCC------------CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHH
Q psy12303 192 ---------TDNCVEVPSDKRGR------------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEI 246 (480)
Q Consensus 192 ---------~~~v~~v~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I 246 (480)
...+.++|.....+ -+++.+++.++... .+..+++|+++..++++|.+.| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l 230 (443)
T PRK08360 152 FPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKL 230 (443)
T ss_pred cccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHH
Confidence 11345555432111 12334555554311 1345899999988899998765 8999
Q ss_pred HHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccc
Q psy12303 247 ADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 247 ~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
.++|++||+++++|++|+++......+.. ...++ ..|+++ +.|.++++++.|+++.+ ++........ .+..
T Consensus 231 ~~l~~~~g~llI~DEv~~g~gr~G~~~a~-~~~~~-~pDiit--lsK~l~~G~pigav~~~-~~i~~~~~~~--~~~~-- 301 (443)
T PRK08360 231 KKILDEHGILLVVDEVQSGLGRTGKWFAI-EHFGV-EPDIIT--LGKPLGGGLPISATIGR-AEIMDSLPPL--AHAF-- 301 (443)
T ss_pred HHHHHHcCCEEEEeccccCCCcCccchhh-hhcCC-CCCEEE--ecccccCCceeEEEEEc-HHHHhhhcCC--CCCC--
Confidence 99999999999999999976443322111 22344 568776 47999977788998865 4444332110 0000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~ 403 (480)
++ ++.+....++..+++.+..+ +..++..++.++|.+.|++. .+-+.-+ .....++.+.
T Consensus 302 -------------T~-~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rg~Gl~~gie 363 (443)
T PRK08360 302 -------------TL-SGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDV-RGIGLMIGVD 363 (443)
T ss_pred -------------CC-CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEE
Confidence 00 11112233344444443222 35567777777777777651 2222111 2333444444
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+......... + ......+...+.++|.++ ... . .+.+|++ ++..+|++||+++++++++.++.
T Consensus 364 ~~~~~~~~~~-~------~~~~~~~~~~l~~~Gi~~-~~~---~-~~~lr~~-P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 364 LVKDRETKER-A------YEEAAKVVWRAWELGLIV-TFF---S-GNVLRIQ-PPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred EecCCcccCc-c------HHHHHHHHHHHHHCCeEE-eec---C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 4321100000 0 011246778888999543 321 2 4689999 99999999999999999987653
No 300
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=4.2e-15 Score=148.82 Aligned_cols=319 Identities=15% Similarity=0.073 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.++++++.. ...+.|+++||+|+..|++.||.. .|. +.+|......|.....++...+
T Consensus 98 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~al~~~~ 165 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSY-------TGR-----QAVVVFDHAYHGRTNLTMALTA 165 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh-------hCC-----CeEEEECCCcCcChHHHHhhcC
Confidence 355556778888887543 246899999999999999999864 221 3245555566777666665433
Q ss_pred C--------C--CCCeEEeeCCCCCC------CC-HHHHHHHHHHHHH--CCCccEEEEeccCCCccccccC----hHHH
Q psy12303 190 L--------G--TDNCVEVPSDKRGR------LI-PSELERLVLERKA--KGDIPFFVNCTSGTTVLGAFDP----IEEI 246 (480)
Q Consensus 190 ~--------~--~~~v~~v~~~~~~~------~d-~~~L~~~i~~~~~--~~~~~~~v~~~~~~~~~G~~~~----l~~I 246 (480)
. + ...+..+|....++ .+ .+.+++.++...+ .+..+++|+++..+...|.+.| +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~l 245 (443)
T PRK06058 166 KSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPAL 245 (443)
T ss_pred CCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHH
Confidence 1 1 11233343221111 11 1222222221111 1235889999988877787754 9999
Q ss_pred HHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccc
Q psy12303 247 ADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 247 ~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
.++|++||+++|+|+++.++......+.. ...++ .+|++++ .|.++++++.|+++.++ ++.+.... .....
T Consensus 246 r~lc~~~gillI~DEV~tGfgRtG~~fa~-~~~gv-~PDiv~~--gK~l~~G~Pi~av~~~~-~i~~~~~~---~~~~~- 316 (443)
T PRK06058 246 LEWCRENGVVFIADEVQTGFARTGAWFAC-EHEGI-VPDLITT--AKGIAGGLPLSAVTGRA-EIMDAPHP---GGLGG- 316 (443)
T ss_pred HHHHHHcCCEEEEeccccCCCcChhhhHH-HhcCC-CCCEEEE--cccccCCCccEEEEEcH-HHHhhccC---CCCCC-
Confidence 99999999999999999987554433333 33455 6799986 59998888899998754 34332211 00000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEec--CCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLIL--EPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~--~~~~~~v~f~ 403 (480)
++ .+.+....++.++|+.+.. .++.++..++.++|.+.|++ +. ...++. ...+.++.+.
T Consensus 317 -------------T~-~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~~i~~vrg~G~~~~i~ 378 (443)
T PRK06058 317 -------------TY-GGNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRA-LAAEDDRIGDVRGRGAMIAIE 378 (443)
T ss_pred -------------CC-CCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHH-HHhhCCcEEeeeccceEEEEE
Confidence 00 1111222333333443322 24566777777888877765 31 112221 2444555555
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
+.+.... ..+. +....+.+.+.++|.++..... . .+++|+. ++..+|++||++++++|++.+++|
T Consensus 379 ~~~~~~~-~~~~-------~~~~~l~~~~~~~Gv~~~~~~~-~--~~~lr~~-Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 379 LVKPGTT-EPDA-------ELTKALAAAAHAAGVIVLTCGT-Y--GNVIRLL-PPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EecCCCC-CCcH-------HHHHHHHHHHHHCCeEEeccCC-C--CCEEEEE-CCCccCHHHHHHHHHHHHHHHHhC
Confidence 5432111 0000 1134677888889955432211 1 3689998 899999999999999999988764
No 301
>KOG0634|consensus
Probab=99.76 E-value=1.2e-15 Score=142.09 Aligned_cols=333 Identities=14% Similarity=0.131 Sum_probs=216.4
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCCCC---CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGWQG---GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~~~---~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|..+.+..++...+.+.....++.+. .++++|+|.|.+...++++++++ |+ .|++...++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~--------------gd-~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINR--------------GD-HVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcC--------------CC-ceEEecccc
Confidence 3455555555555554443333344432 57999999999999999999984 34 899999999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC---CCccEE-EEeccCCCccccccCh---HHHHHHHH
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAK---GDIPFF-VNCTSGTTVLGAFDPI---EEIADICQ 251 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~---~~~~~~-v~~~~~~~~~G~~~~l---~~I~~i~~ 251 (480)
++....++.+|+ +++.|+.|++| +++|.|++.+...... ..+|.+ -.+..++||||...++ ++|.++||
T Consensus 159 ~~AL~s~~a~gv---~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LAr 234 (472)
T KOG0634|consen 159 PSALQSMEALGV---KIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLAR 234 (472)
T ss_pred hHHHHhccccCc---eEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHH
Confidence 999999999987 77888877665 8999999999865432 133544 4788899999999876 78999999
Q ss_pred HcCcEEEeecccccccccc----ccccC-------------cccCC--CCCCccceeCccccCCCcccceEEEEeCchhh
Q psy12303 252 KYNMWLHVDAAWGGGLLLS----KKYRH-------------PRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLL 312 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~----~~~~~-------------~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~ 312 (480)
+|++.++.|+.|....+.. ..... |...+ .++--+-.-|++|.+..+...|++... +..+
T Consensus 235 KyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~-~~~l 313 (472)
T KOG0634|consen 235 KYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGN-SLFL 313 (472)
T ss_pred HcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecC-HHHH
Confidence 9999999999998765531 10000 11111 111111233678999977889998754 4344
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHH----HHHHHHHHHHHhcCCCC
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRL----MELAEYMVKKIKSMPDK 388 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~----~~l~~~l~~~l~~~~~g 388 (480)
+...... . .+.+....+...-+++.++.+|++|+.+.+.+. ...+..+.+.|.+++|.
T Consensus 314 ~ril~~a-e-----------------~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~ 375 (472)
T KOG0634|consen 314 KRILDLA-E-----------------VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPK 375 (472)
T ss_pred HHHhhhc-c-----------------eeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3322111 0 011111224566788889999997766655544 45677778888886665
Q ss_pred e-EEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC---C---cccEEEEecccCCC
Q psy12303 389 F-YLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN---D---LPNFFRNIISSAAV 461 (480)
Q Consensus 389 ~-~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---~---~~~~~R~~~~~~~~ 461 (480)
- -.+.+|..+++.+.-++-...+ ..+.++++...+...+.+.|+.++....+. + .+-++|+++. . .
T Consensus 376 ~~~~~~~P~aGmFiwv~i~~~~~~-----~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~-a 448 (472)
T KOG0634|consen 376 SVCEYHPPKAGMFIWVEIPYINFD-----TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-F-A 448 (472)
T ss_pred CeeEEecCCcceEEEEEecccccc-----cccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee-c-C
Confidence 4 4446888898887666511111 111233344567778888887655432211 1 1349999943 3 3
Q ss_pred CHHHHHHHHHHHHHhhcc
Q psy12303 462 TEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~~ 479 (480)
..+++++.++++...+++
T Consensus 449 ~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 449 EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 677888888888776654
No 302
>KOG1359|consensus
Probab=99.76 E-value=4.4e-16 Score=137.46 Aligned_cols=299 Identities=18% Similarity=0.175 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
+...+.+.+...++++-+-++ .++.+++-.||.-++.+... | +..|+..+..|.|+....+++
T Consensus 109 Gtq~iHk~LE~kiAqfh~rED--~ilypscfdANag~feail~--------------p-edAvfSDeLNhASIIdGirLc 171 (417)
T KOG1359|consen 109 GTQDIHKLLESKIAQFHGRED--TILYPSCFDANAGAFEAILT--------------P-EDAVFSDELNHASIIDGIRLC 171 (417)
T ss_pred cchHHHHHHHHHHHHHhCCCc--eEEeccccccchHHHHHhcC--------------h-hhhhhccccccchhhhhhHHH
Confidence 345666777778999988765 78889999999988887754 4 337888899999998887776
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
.. .+.+|+..|+..+.+..+ .+-++|+-...-++.|.+.|+++|..++++||+++.+|+||+.+.+
T Consensus 172 kr------------y~h~dv~~l~~~l~~a~k--~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~ 237 (417)
T KOG1359|consen 172 KR------------YRHVDVFDLEHCLISACK--MRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFF 237 (417)
T ss_pred hh------------hccchhHHHHHHHHHhhh--heEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceee
Confidence 52 234688888888775533 2367888888889999999999999999999999999999998876
Q ss_pred cccc-ccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 269 LSKK-YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 269 ~~~~-~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
--.. .....+.-..++|++...+.|.+++ ..|.+......+.....+..-+|++...-. ..--.
T Consensus 238 G~tGrGt~E~~~vm~~vdiinsTLgKAlGg--a~GGyttgp~~li~llrqr~RpylFSnslp-------------pavV~ 302 (417)
T KOG1359|consen 238 GETGRGTAEEFGVMGDVDIINSTLGKALGG--ASGGYTTGPKPLISLLRQRSRPYLFSNSLP-------------PAVVG 302 (417)
T ss_pred cCCCCChHHHhCCCCcceehhhhhhhhhcC--CCCCCccCChhHHHHHHhcCCceeecCCCC-------------hhhhh
Confidence 2211 1110222234789999999999985 245555566666666666677888764221 00001
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+.+++..+.. -.+.+.+...+.+++++..+. .|+.+.+.. . -+|-...... ++..+
T Consensus 303 ~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~--aGftIsg~~-h-PI~pv~lGda--------------~lA~~ 359 (417)
T KOG1359|consen 303 MAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEA--AGFTISGAS-H-PICPVMLGDA--------------RLASK 359 (417)
T ss_pred hhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHh--cCceecCCC-C-CccceecccH--------------HHHHH
Confidence 23333333221 245567888899999999988 899986532 1 1121111100 11345
Q ss_pred HHHHHHhcccEEEeee---eeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 428 LKGRMMQAGTMMVGYQ---PLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~---~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..+.|.++|..++... ...+ ...+|+. .+..+|+||||++++++.++.+
T Consensus 360 ~ad~lLk~Gi~Vigfs~PvVP~g-kariRVq-iSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 360 MADELLKRGIYVIGFSYPVVPKG-KARIRVQ-ISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred HHHHHHhcCceEEeecCCcCCCC-ceEEEEE-EehhcCHHHHHHHHHHHHHHHH
Confidence 6788889997655432 2234 5688988 8899999999999999988765
No 303
>PRK06105 aminotransferase; Provisional
Probab=99.76 E-value=2.2e-15 Score=150.91 Aligned_cols=327 Identities=14% Similarity=0.089 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.|+++++.+-..+.|+++||+|+..|++.++... ...|. +++. +|......|.....+....+
T Consensus 91 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~----~~~g~---t~r~~il~~~~~yHG~t~~a~s~t~ 163 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYN----NALGR---PEKKKIISRQRGYHGVTIASASLTG 163 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEecCccCCcchhheeccC
Confidence 4555667788888875433569999999999999999998531 11222 2222 44455666776655544333
Q ss_pred CC---------CCCeEEeeCCCCCCC-------------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 LG---------TDNCVEVPSDKRGRL-------------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~~-------------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
.. ...+..+|.....+. ..+++++.+... ....+++|++...+...|.+.+ +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl 241 (460)
T PRK06105 164 LPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYW 241 (460)
T ss_pred CcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHH
Confidence 21 012333433211111 135566666421 2235899999999888898877 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc--
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA-- 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~-- 320 (480)
+++.++|++||+++++|+++.++......+.. ...++ .+|+++ +.|.++++ .+.|+++.++ ++.........
T Consensus 242 ~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~-~~~~v-~PDi~~--~gK~lggG~~P~~av~~~~-~i~~~~~~~~~~~ 316 (460)
T PRK06105 242 EKIQAVLRKYDILLVADEVICGFGRTGNMFGC-ETFGI-KPDILV--MSKQLSSSYQPLSAVLMNE-KVYDPIADESGKI 316 (460)
T ss_pred HHHHHHHHHcCCeEEEeccccCCCcCchhhhH-HhcCC-CCCeee--eecccccCcccceEEEEcH-HHHHHHhcccccC
Confidence 99999999999999999999776554444333 34456 689888 56999876 3788888754 33332211100
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--Ccee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~ 398 (480)
..+.+. .++ .+.+....++.++|+.+-. ++..++..++.++|.+.|++ +....++.+ -.+.
T Consensus 317 ~~~~h~----------~T~---~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~-l~~~~~v~~vrG~Gl 379 (460)
T PRK06105 317 GTFGHG----------FTA---SGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRA-LADHPLVGEVRGVGL 379 (460)
T ss_pred cccccC----------CCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-hhcCCCeEEEEecce
Confidence 000000 000 1111223333344444432 34567888888888888877 432222222 1223
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+..+.+.+.......... .......+...+.++|.++ .+. .+.+|++ +....|++||+++++.+++.++
T Consensus 380 ~~gie~~~~~~~~~~~~~----~~~~a~~i~~~~~~~Gvl~-~~~-----g~~i~l~-Ppl~it~~eid~~~~~l~~~l~ 448 (460)
T PRK06105 380 IAAVELVADKATKTPFEP----PGKVGARANAAAHEHGVIS-RAM-----GDTLAFC-PPLIITAAQVDEMVDRFGRALD 448 (460)
T ss_pred EEEEEEecCcccCCCCCc----hhHHHHHHHHHHHHCCeEE-Eec-----CCEEEEE-CCCccCHHHHHHHHHHHHHHHH
Confidence 334444322110000000 0011245778888888554 321 3589999 8888999999999999988775
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 449 ~ 449 (460)
T PRK06105 449 D 449 (460)
T ss_pred H
Confidence 4
No 304
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=6.9e-17 Score=158.77 Aligned_cols=242 Identities=13% Similarity=0.129 Sum_probs=164.7
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH--
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC-- 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~-- 184 (480)
.|....+|+. ++++.|... ++.++||+.|+.+++.++.. ||+ +|+++...|.+....
T Consensus 60 nPtv~~lE~~----la~leg~~~--av~~~SG~aAi~~al~all~--------------~GD-~VI~~~~~Y~~T~~~~~ 118 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGVG--AVATASGQAAIMLAVLNICS--------------SGD-HLLCSSTVYGGTFNLFG 118 (432)
T ss_pred CcHHHHHHHH----HHHHhCCCc--EEEECCHHHHHHHHHHHhcC--------------CCC-EEEECCCchHHHHHHHH
Confidence 4666666665 888888865 78999999999999987643 556 788888888766655
Q ss_pred --HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 185 --AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 185 --~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
+..+|+ ++.++.. .+|+++++++|+++ |++|++++++||++.+.|+++|+++|+++|+++++|++
T Consensus 119 ~~l~~~Gi---~v~~vd~----~~d~~~l~~~I~~~------Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T 185 (432)
T PRK06702 119 VSLRKLGI---DVTFFNP----NLTADEIVALANDK------TKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNT 185 (432)
T ss_pred HHHHHCCC---EEEEECC----CCCHHHHHHhCCcC------CeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECC
Confidence 566677 7777743 46999999999876 89999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCch--hhH----hhhcCCccccccccc-ccC-cc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDG--LLI----SCNQMSAEYLFMQDK-LYD-VR 333 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~--~~~----~~~~~~~~~l~~~~~-~~~-~~ 333 (480)
++.+.+ .....+ +||+++.|..||+++.. ..|.+++.... +.. ........+...... ... ..
T Consensus 186 ~~tP~~-~~pl~~-------GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 257 (432)
T PRK06702 186 LATPYL-CQAFEH-------GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAA 257 (432)
T ss_pred CCchhh-CChhhc-------CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhh
Confidence 975433 223344 89999999999998763 34444442221 110 000000000000000 000 00
Q ss_pred -c--CCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 334 -Y--DTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 334 -~--~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
. .........+.......+|+.++. .+.+..++++..+++..+.+.|++ +|.++.+.
T Consensus 258 ~~~~~~~~~~~~~g~~~sp~~a~l~~rg--L~Tl~lR~~r~~~Na~~la~~L~~-~p~V~~V~ 317 (432)
T PRK06702 258 YIVKARVQLLRDYGNCMSPFNAYISNIG--LETLHLRMERHSENALAVAKWLAD-HERIEWVN 317 (432)
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHh-CCCcceEE
Confidence 0 000000112233567778877665 567888999999999999999999 88876543
No 305
>PRK05965 hypothetical protein; Provisional
Probab=99.75 E-value=3.4e-15 Score=149.61 Aligned_cols=328 Identities=12% Similarity=0.050 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
++...++.+.+++++.-+-..+.|+++||+|+..|++.||... ..+|. +++. +|......|.....+....+
T Consensus 89 ~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~----~~~g~---~~r~kii~~~~~YHG~t~~a~s~t~ 161 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYW----NATGR---PSKKQFISLERGYHGSSSVGAGLTA 161 (459)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHH----HhcCC---CCccEEEEecCCcCcccHHHHHhcC
Confidence 3444567777888764333569999999999999999998742 12232 2232 44455556766554444433
Q ss_pred C-------C--CCCeEEeeCCCCC----CCCH--------HHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 190 L-------G--TDNCVEVPSDKRG----RLIP--------SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 190 ~-------~--~~~v~~v~~~~~~----~~d~--------~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. + ...+..+|..... .-|. +++++.++.. ....+++|+++..+...|.+.| ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~ 239 (459)
T PRK05965 162 LPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLK 239 (459)
T ss_pred CchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHH
Confidence 2 1 1123344432111 1132 4566666532 1135899999999888887754 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc--c
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA--E 321 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~--~ 321 (480)
+|.++|++||+.+|+|+++.|+......+.. ...++ .+|++++ .|.+++++ +.|+++++++ +......... .
T Consensus 240 ~lr~lc~~~gillI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~ 314 (459)
T PRK05965 240 AMREACRELGILFVADEVITGFGRTGPLFAC-EAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDH-VYQGIADGAGAAA 314 (459)
T ss_pred HHHHHHHHcCCEEEEechhccCccCchhhhH-hhcCC-CCCeEEe--chhhccCCcceeEEEEcHH-HHHHHhccccccc
Confidence 9999999999999999999988665554444 44566 6999994 69999885 8999987654 3332211000 0
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVN 399 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~ 399 (480)
.+.+. .++ .+.+....++.++|+.+-. ++..++..++.++|.+.|++ +....++.+. .+.+
T Consensus 315 ~~~h~----------~T~---~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~-l~~~~~v~~vrG~Gl~ 377 (459)
T PRK05965 315 PVGHG----------YTY---SAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAAGLDA-LRAHPLVGDVRGRGLL 377 (459)
T ss_pred ccccc----------CCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHh-hccCCCEEEEeecceE
Confidence 00010 000 1222223333344444322 34567778888888888877 4322222221 2233
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.+........... .. ..+...+.+.+.++|.++... + .+++|++ +...+|++||+++++.+.+.+++
T Consensus 378 ~gie~~~~~~~~~~~~-~~---~~~~~~i~~~~~~~Gll~~~~----g-~~~i~~~-PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 378 GALELVADKATKTPFD-AA---LDPADRIFDRAYANGLVFRAF----G-DGVLGFA-PALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred EEEEEeccccccCCCC-ch---hHHHHHHHHHHHhCCeEEEec----C-CcEEEEE-CCCcCCHHHHHHHHHHHHHHHHH
Confidence 3343332110000000 00 012346778888999654321 3 4689999 99999999999999999987754
No 306
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.75 E-value=7.4e-17 Score=160.15 Aligned_cols=235 Identities=18% Similarity=0.187 Sum_probs=156.7
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH----HHHHHHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV----RSCAAVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~----~~~~~~~g~ 190 (480)
.++.+.++++.|.+. .++++||+.|+..++.++.. ||+ .|+++...|... ...+...|+
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~~--------------~Gd-~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLAQ--------------AGD-NIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHhC--------------CCC-EEEEECCCcHHHHHHHHHHHHHcCc
Confidence 345566999999754 89999999999999987754 456 677777776543 334556676
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++.+ |+++++++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....
T Consensus 123 ---~v~~v~~~-----d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~ 188 (418)
T TIGR01326 123 ---EVRFVDPD-----DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCR 188 (418)
T ss_pred ---EEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCC
Confidence 77777753 899999998765 8899999999999999999999999999999999999998663222
Q ss_pred ccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccccc-CcccC--CC---------
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY-DVRYD--TG--------- 337 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~--~~--------- 337 (480)
+ ... ++|+++.|++|+++++ ...|++++.......... ....+......+ ...+. .+
T Consensus 189 ~-l~~-------g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~--~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~ 258 (418)
T TIGR01326 189 P-IDH-------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANG--RFPLFTTPDPSYHGLVFTETFGNPAFIVKAR 258 (418)
T ss_pred c-hhc-------CCeEEEECccccccCCccceEEEEEeccccccccc--ccccccCCCCccccchhhhhhchhhHHHHHH
Confidence 1 223 7899999999999874 447777775543221100 000000000000 00000 00
Q ss_pred -CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 338 -DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 338 -~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.+....|-......+|..++ |.+.+..++++..+++..+.+.|.+ .|++..+.
T Consensus 259 ~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~-~~~V~~V~ 312 (418)
T TIGR01326 259 VQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEA-HPKVAWVN 312 (418)
T ss_pred HHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHh-CCCccEEE
Confidence 00000122234456665554 4566777778888889999999999 88876543
No 307
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.75 E-value=1.1e-15 Score=152.58 Aligned_cols=314 Identities=15% Similarity=0.127 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc--
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC-- 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~-- 188 (480)
.+.+.++.+.+++.+.. .+.+.|+++||||++.|++.||.. .|. +.+|......|..........
T Consensus 138 ~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~-------tgr-----~~Ii~~~g~YHG~~~~~~~~~~~ 204 (474)
T PLN02482 138 CLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAY-------TGR-----EKIIKFEGCYHGHADSFLVKAGS 204 (474)
T ss_pred CHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHh-------cCC-----CEEEEECCccCCCcchhhhhcCC
Confidence 46677788888888753 247999999999999999999875 221 223444555666432221111
Q ss_pred CC---------CC-----CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 189 GL---------GT-----DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 189 g~---------~~-----~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
+. +. ..+..+|.+ |+++|++.+++. +..+++|+++......|.+.| +++|.++|
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc 276 (474)
T PLN02482 205 GVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREIT 276 (474)
T ss_pred CccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 10 00 012233333 788999888642 344889999999999998876 57899999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|+++.|+ ........ ...++ .+|+++ +.|.+++++++|++.. ++++++........+..+
T Consensus 277 ~~~g~lLI~DEV~tGf-R~g~~ga~-~~~gv-~PDi~t--~gK~lggG~Pigav~g-~~ei~~~~~~~~~~~~~~----- 345 (474)
T PLN02482 277 KENGALLVFDEVMTGF-RIAYGGAQ-EYFGI-TPDLTT--LGKVIGGGLPVGAYGG-RREIMEMVAPAGPMYQAG----- 345 (474)
T ss_pred HHcCCEEEEeccccCe-ecCcchHh-HHhCC-CCCEEE--ecchhhCCCceEEEEE-cHHHHHhhccCCCccccc-----
Confidence 9999999999999876 33322222 33455 689877 5799998888999965 445544332111111111
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~ 407 (480)
++ .+.+....+..++|+.+.. .+..++..++.++|.+.|++ . .++.++.....+++.+.+...
T Consensus 346 -------T~---~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~-l~~~~g~~~~~~~v~g~~gi~f~~~ 411 (474)
T PLN02482 346 -------TL---SGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILE-AGKKAGHEMCGGYISGMFGFFFTEG 411 (474)
T ss_pred -------Cc---chhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHH-HHHhcCCCEEEcccceEEEEEEecC
Confidence 00 0111222334444544422 34567777788888887765 3 123332112223444444322
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
......+....+ ......+.+.+.++|.++ .+.... . + +++..+|++|||++++++++.++++
T Consensus 412 ~~~~~~~~~~~d--~~~~~~~~~~l~~~Gv~~-~~~~~~---~--~--~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 412 PVYNFADAKKSD--TAKFARFHRGMLEEGVYL-APSQFE---A--G--FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CccChhhhccCC--HHHHHHHHHHHHHCCeEE-eccCCC---C--C--cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 211100000000 011245678888888543 331111 1 1 2678889999999999999988764
No 308
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.75 E-value=2.1e-15 Score=150.49 Aligned_cols=322 Identities=14% Similarity=0.096 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc-eEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ-LVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~-~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.++++++.+-..+.|+++||+|+..|++.+|... ..+|. +++ .+|......|.....+....|.
T Consensus 92 ~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~gals~~~~ 164 (445)
T PRK09221 92 PLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYH----RARGQ---GTRTRLIGRERGYHGVGFGGISVGGI 164 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCccchhhhccCCC
Confidence 445567777888875333469999999999999999998741 11221 112 2445555567655444433331
Q ss_pred C---------CCCeEEeeCCC---C--CCC--------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 191 G---------TDNCVEVPSDK---R--GRL--------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 191 ~---------~~~v~~v~~~~---~--~~~--------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ...+..+|... . +.. ..+++++.++.. ....+++|+++..+...|.+.| ++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~ 242 (445)
T PRK09221 165 VNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQ 242 (445)
T ss_pred hhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHH
Confidence 1 01233344321 0 000 134666666532 1134889999999999999988 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
+|.++|++||+++++|++++++......+.. ...++ ..|+++ +.|.++++ .+.|.++.++ +..+.... .+.+.
T Consensus 243 ~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~-~~~gv-~PDi~~--~gK~l~gG~~Pi~av~~~~-~i~~~~~~-~~~~~ 316 (445)
T PRK09221 243 RLREICDKHGILLIFDEVITGFGRLGAAFAA-ERFGV-TPDIIT--FAKGLTNGAIPMGAVIASD-EIYDAFMQ-GPEYA 316 (445)
T ss_pred HHHHHHHHcCCEEEEeehhhCCCcCchhhHH-HhcCC-CCCEEE--eccccccCcccceeeEEcH-HHHHhhcc-Ccccc
Confidence 9999999999999999999765443333222 23344 579887 56888765 4577777654 44433221 11110
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeEEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVNVS 401 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~ 401 (480)
.. ..... ++ .+.+.....+.++|+.+..+ ...++..++.++|++.|++ +.+...+.+. ...+..
T Consensus 317 ~~-------~~~~~--T~-~~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~-l~~~~~v~~vrg~Gl~~~ 382 (445)
T PRK09221 317 IE-------FFHGY--TY-SAHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHS-LKGLPHVIDIRNIGLVAG 382 (445)
T ss_pred cc-------ccccc--CC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHh-hccCCCEEEEecCceEEE
Confidence 00 00000 11 12112223333444444332 4568888899999998887 5332222221 112222
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.+..... . .....+.+.+.++|.++ .. . .+.+|++ ++..+|++||+++++.|++.+++
T Consensus 383 v~~~~~~~~~--~--------~~~~~~~~~~~~~Gv~~-~~----~-~~~lr~~-Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 383 IELAPRPGAP--G--------ARGYEAFMKCFEKGLLV-RY----T-GDTIALS-PPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred EEEecccccc--c--------chHHHHHHHHHHCCeEE-ee----c-CCEEEEE-CCccCCHHHHHHHHHHHHHHHHh
Confidence 3332211000 0 00235678888888543 32 1 3689999 99999999999999999998765
No 309
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.75 E-value=1.9e-16 Score=161.81 Aligned_cols=312 Identities=17% Similarity=0.120 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH-HHHcCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC-AAVCGLGT 192 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~-~~~~g~~~ 192 (480)
-.+..+.+|+.||++. .-++++|+|.+|..++.++.. ||+ .|+++..+|-|+..+ +.+.|+
T Consensus 176 i~eAq~~AA~~fgAd~-tyFlvNGTS~gn~a~i~a~~~--------------~Gd-~VLvdRN~HKSv~hgaLiLsGa-- 237 (720)
T PRK13578 176 AKDAQKHAAKVFNADK-TYFVLNGTSASNKVVTNALLT--------------PGD-LVLFDRNNHKSNHHGALIQAGA-- 237 (720)
T ss_pred HHHHHHHHHHHhCCCc-eEEEeCChhHHHHHHHHHhcC--------------CCC-EEEeecccHHHHHHHHHHHcCC--
Confidence 3455677999999976 468889999999999888875 556 899999999999995 888888
Q ss_pred CCeEEeeCC--CC---CCCCHHH-----HHHHHHHH-HH--CCCcc-EEEEeccCCCccccccChHHHHHH-HHHcCcEE
Q psy12303 193 DNCVEVPSD--KR---GRLIPSE-----LERLVLER-KA--KGDIP-FFVNCTSGTTVLGAFDPIEEIADI-CQKYNMWL 257 (480)
Q Consensus 193 ~~v~~v~~~--~~---~~~d~~~-----L~~~i~~~-~~--~~~~~-~~v~~~~~~~~~G~~~~l~~I~~i-~~~~~~~l 257 (480)
..++++.. +. +.++++. ++++|++. .+ +..+| ++++++++ |..|.+.++++|+++ ++.++ ++
T Consensus 238 -~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~l 314 (720)
T PRK13578 238 -TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YI 314 (720)
T ss_pred -eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cE
Confidence 55666543 22 3456544 88888765 11 12234 89999999 678999999999999 68888 99
Q ss_pred EeeccccccccccccccC-cccCCCCCCc----cceeCccccCCCcccceEEEEeCchh-----------hHhhh----c
Q psy12303 258 HVDAAWGGGLLLSKKYRH-PRLTGIERAD----SVTWNPHKLMGTLLQCSTIHFKQDGL-----------LISCN----Q 317 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~-~~~~~~~~~D----~~~~s~hK~~~~p~~~g~~~~~~~~~-----------~~~~~----~ 317 (480)
|||+|||+...+.+.++. |....-.++| +++-|.||.+.+-...+.+.+++... +..+. +
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qS 394 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAS 394 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcC
Confidence 999999999877775321 1121223788 99999999999877888888866421 11110 1
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH-hcCCCCeEEecCCc
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI-KSMPDKFYLILEPE 396 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l-~~~~~g~~~~~~~~ 396 (480)
.+|.|+. ++++.+...+.. +..| +++.++..+++..+++.| +. +++++++.++.
T Consensus 395 TSPsY~L----------------------mASLDva~~~m~-~~~G-~~l~~~~i~~a~~~R~~l~~~-~~~~~~~~p~~ 449 (720)
T PRK13578 395 TSPFYPL----------------------FAALDVNAKMHE-GESG-RRLWMECVKLGIEARKLILAR-CKLIRPFIPPV 449 (720)
T ss_pred CChHHHH----------------------HHHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHh-CCCeeeccccc
Confidence 1111110 123333222211 1122 556677788888888888 66 78888774321
Q ss_pred e---------------eEEEEEeecCcc----CC-------CchhhH---HHHhh---------hh-hHHHHHHHHhccc
Q psy12303 397 M---------------VNVSFWYLPTRV----RN-------MPHEKR---LNILG---------EI-TPILKGRMMQAGT 437 (480)
Q Consensus 397 ~---------------~~v~f~~~~~~~----~~-------~~~~~~---~~~l~---------~~-~~~i~~~l~~~g~ 437 (480)
. ..-||.+.|..- .+ .+..++ ...++ .+ +..+.+.|.++|
T Consensus 450 v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~g- 528 (720)
T PRK13578 450 VDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENG- 528 (720)
T ss_pred ccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcC-
Confidence 1 111233332210 00 000000 00010 00 245667776775
Q ss_pred EEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 438 MMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 438 ~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+..+. .+.+-+. .++..|++++++++++|.++.
T Consensus 529 I~~E~~d----~~~vL~l-~s~g~t~~~~~~Lv~aL~~f~ 563 (720)
T PRK13578 529 IVPEKCD----LNSILFL-LTPAEDMAKLQQLVAMLARFE 563 (720)
T ss_pred CEEEecC----CCeEEEE-eCCCCCHHHHHHHHHHHHHHH
Confidence 4444432 3455554 678899999999999998763
No 310
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.75 E-value=1.2e-15 Score=155.79 Aligned_cols=310 Identities=16% Similarity=0.178 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
-.+..+.+|+.||++. .-++++|+|.+|..++.++.. ||+ .|+++..+|-|+..++.+.|+
T Consensus 197 i~eAe~~aA~~fgAd~-tyfvvNGTS~~n~av~~a~~~--------------~Gd-~VLvdRN~HKSv~~aLilsga--- 257 (713)
T PRK15399 197 HLEAEEYIARTFGAEQ-SYIVTNGTSTSNKIVGMYAAP--------------AGS-TLLIDRNCHKSLAHLLMMSDV--- 257 (713)
T ss_pred HHHHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHhcC--------------CCC-EEEeecccHHHHHHHHHHcCC---
Confidence 3445677999999976 467888889999999988865 556 899999999999999999998
Q ss_pred CeEEeeCCC--C---CCCCH-----HHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE-Eeecc
Q psy12303 194 NCVEVPSDK--R---GRLIP-----SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL-HVDAA 262 (480)
Q Consensus 194 ~v~~v~~~~--~---~~~d~-----~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l-~vD~a 262 (480)
..++++... . +.+++ +.++++|++..+. .+|+.++++++ |..|.+.++++|.++| |+.+ |||+|
T Consensus 258 ~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 258 VPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred eeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEecc
Confidence 556665432 2 34565 8888898765322 45689999999 7889999999999999 6665 79999
Q ss_pred ccccccccccccC-cccCCCCCCccc---eeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 263 WGGGLLLSKKYRH-PRLTGIERADSV---TWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 263 ~~~~~~~~~~~~~-~~~~~~~~~D~~---~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
|++...+.+.++. ..+.+..++|.+ +-|.||.+.+-...+.+.++..-...... ..|...+
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n---~a~~m~~------------ 397 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFN---EAFMMHT------------ 397 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHH---HHHHHHc------------
Confidence 9998877765431 022222256777 89999999988889999886531111110 1111110
Q ss_pred ccccCCCC----CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC------eEEecCCce-eEEEEEeecC
Q psy12303 339 KVIQCGRH----NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK------FYLILEPEM-VNVSFWYLPT 407 (480)
Q Consensus 339 ~~~~~~r~----~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g------~~~~~~~~~-~~v~f~~~~~ 407 (480)
.+.+ ++++.....+.. +..| +++.++..+++..+++.|.+ ..+ ++++.+... ..-||.+.|.
T Consensus 398 ----STSPsY~LmASLD~a~~~m~-~~~G-~~l~~~~i~~a~~fR~~l~~-~~~~~~~w~f~~~~~~~~~~~~~w~l~p~ 470 (713)
T PRK15399 398 ----STSPSYPIVASVETAAAMLR-GNPG-KRLINRSVERALHFRKEVQR-LREESDGWFFDIWQPENVDEAECWPVAPG 470 (713)
T ss_pred ----CCCcHHHHHHHHHHHHHHHH-hhhh-HHHHHHHHHHHHHHHHHHHh-ccccccCceeeecCccccCCccceecCCC
Confidence 0111 122222222211 1233 56677888888888888887 666 566542111 0112322221
Q ss_pred cc----CC-------Cchh-------------hH-HHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCC
Q psy12303 408 RV----RN-------MPHE-------------KR-LNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVT 462 (480)
Q Consensus 408 ~~----~~-------~~~~-------------~~-~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t 462 (480)
.- .+ .+.. +. ...+. +..+.+.|.+.| +.+..+. .+.+-+. .++..|
T Consensus 471 ~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~--g~~l~~~L~e~g-I~~E~~d----~~~vL~l-~s~g~t 542 (713)
T PRK15399 471 EQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIP--AALVAKFLDERG-IVVEKTG----PYNLLFL-FSIGID 542 (713)
T ss_pred cccccccccccccccCCCceEEEEecCcccccccccCCCC--HHHHHHHHHHcC-CEEEecC----CCeEEEE-eCCCCC
Confidence 00 00 0000 00 00011 235667776776 4444422 3456665 778899
Q ss_pred HHHHHHHHHHHHHhh
Q psy12303 463 EGDIDFLLTEMDRLG 477 (480)
Q Consensus 463 ~~di~~~~~~l~~~~ 477 (480)
++++++++++|.++-
T Consensus 543 ~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 543 KTKAMGLLRGLTEFK 557 (713)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 311
>PRK07678 aminotransferase; Validated
Probab=99.75 E-value=7.4e-15 Score=146.99 Aligned_cols=330 Identities=17% Similarity=0.152 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceE-EEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLV-MFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~-vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.++++++.. ..+.|+++||+|+..|++.||... ...|. ||+.. |......|.....+....+.
T Consensus 89 ~~~~~lae~l~~~~~~~-~~v~f~~sGseA~e~AlklAr~~t----~~~g~---~~r~~ii~~~~~yHG~t~~als~~~~ 160 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGE-YVIFFSNSGSEANETAFKIARQYH----AQKGE---PHRYKFISRYRAYHGNSMGALAATGQ 160 (451)
T ss_pred HHHHHHHHHHHHhCCCC-CEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCccHHHhhcCCC
Confidence 44556778888887654 368999999999999999998741 11232 33334 44455567766555554332
Q ss_pred C---------CCCeEEeeCCCCCCC---------CH---HHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHH
Q psy12303 191 G---------TDNCVEVPSDKRGRL---------IP---SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEE 245 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~~---------d~---~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~ 245 (480)
. ...+..+|.....+. +. +.+++.++.. .+..+++|+++..+...|.+.| +++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~ 238 (451)
T PRK07678 161 AQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKA 238 (451)
T ss_pred cccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHH
Confidence 1 112344443322111 11 2245555421 2345899999999888888865 899
Q ss_pred HHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc-ccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA-EYL 323 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~-~~l 323 (480)
+.++|++||+++|+|+++.|+......+.. ...|+ .+|++++ .|.++++ .++|.+++++. +......... ..+
T Consensus 239 lr~lc~~~g~llI~DEV~tGfGRtG~~~~~-~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~-i~~~~~~~~~~~~~ 313 (451)
T PRK07678 239 VKEICQKHGALLISDEVICGFGRTGKAFGF-MNYGV-KPDIITM--AKGITSAYLPLSATAVKKE-IYEAFKGKGEYEHF 313 (451)
T ss_pred HHHHHHHcCCEEEEeehhhcCCcCchhHHH-HhcCC-CCCEEEe--ecccccCCcceeEEEEcHH-HHHHHhccCccccc
Confidence 999999999999999999877554433333 33456 6999985 6999887 48899887654 3332211000 000
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNV 400 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v 400 (480)
.+. +++ .+.+....++.++|+.+..+ ...++..++.++|.+.|++. ++.+.-+ .-.+.++
T Consensus 314 ~h~----------~T~---~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-rg~Gl~~ 376 (451)
T PRK07678 314 RHV----------NTF---GGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-RGKGLLV 376 (451)
T ss_pred ccC----------CCC---CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EeeceEE
Confidence 010 011 11122233333444443332 34566777777777766431 2322111 1222333
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee-eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP-LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~-~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+..........+ . .....+...+.++|.++....+ ..+..+.+|++ ++..+|++||+++++++++.+++
T Consensus 377 ~i~~~~~~~~~~~~~---~---~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~-Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 377 GIELVNDKETKEPAD---N---DKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLS-PPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred EEEEecCCcccCcCc---h---HHHHHHHHHHHHCCcEEeecCccccCCCCEEEEE-CCCcCCHHHHHHHHHHHHHHHHh
Confidence 343332111000000 0 1134677888899965432111 11114689999 99999999999999999998765
Q ss_pred C
Q psy12303 480 L 480 (480)
Q Consensus 480 l 480 (480)
+
T Consensus 450 ~ 450 (451)
T PRK07678 450 I 450 (451)
T ss_pred c
Confidence 4
No 312
>PRK07049 methionine gamma-lyase; Validated
Probab=99.75 E-value=1.3e-15 Score=151.11 Aligned_cols=224 Identities=14% Similarity=0.171 Sum_probs=158.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH-
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA- 185 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~- 185 (480)
.|....+| +.++++.|.+ ++++++||+.|+..++.++.+ ||+ .|+++.+.|..+...+
T Consensus 82 ~Pt~~~Le----~~lA~leg~~--~~iv~~sG~~Ai~~~l~al~~--------------~Gd-~Vv~~~p~Y~~~~~~~~ 140 (427)
T PRK07049 82 HPNSEIVE----DRLAVYEGAE--SAALFSSGMSAIATTLLAFVR--------------PGD-VILHSQPLYGGTETLLA 140 (427)
T ss_pred CcCHHHHH----HHHHHHhCCC--cEEEEccHHHHHHHHHHHHhC--------------CCC-EEEEcCCCcccHHHHHH
Confidence 34444555 4588888865 489999999999888877765 556 7888888888776654
Q ss_pred ---HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH------cCcE
Q psy12303 186 ---AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK------YNMW 256 (480)
Q Consensus 186 ---~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~------~~~~ 256 (480)
...|+ +++.++. ..|++++++++++...+ .++++|++++|+||+|.+.|+++|.+++++ ++++
T Consensus 141 ~~l~~~Gi---~~v~~~~----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~ 212 (427)
T PRK07049 141 KTFRNFGV---GAVGFAD----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPI 212 (427)
T ss_pred HHHHhcCc---EEEEEeC----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCE
Confidence 34455 5555542 25788888888654321 248999999999999999999999999988 8999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCC-c-ccceEEEEeCchhhHhhhcCCcccccccccccCccc
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-L-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRY 334 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 334 (480)
+++|++|.......+ ... ++|+++.|++|++++ | ...|+++ .++++.+........
T Consensus 213 vvvDety~~~~~~~p-l~~-------g~divv~S~SK~~gG~~glr~G~vv-~~~~l~~~l~~~~~~------------- 270 (427)
T PRK07049 213 IACDNTLLGPVFQKP-LEH-------GADLSVYSLTKYVGGHSDLVAGAVL-GRKALIRQVRALRSA------------- 270 (427)
T ss_pred EEEECCccccccCCc-ccc-------CCCEEEEcCceeecCCCCcEEEEEE-CCHHHHHHHHHHHHh-------------
Confidence 999999876543221 122 689999999999995 2 3466665 455444433211110
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 335 DTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 335 ~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+.......+|+.++.+ +.+..++++..++++.+.+.|++ +|+++-+
T Consensus 271 --------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~-~p~V~~v 317 (427)
T PRK07049 271 --------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRD-HPKVEKL 317 (427)
T ss_pred --------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 11113556777776654 46788888999999999999999 8887644
No 313
>PLN00144 acetylornithine transaminase
Probab=99.75 E-value=2.5e-15 Score=147.60 Aligned_cols=306 Identities=11% Similarity=0.049 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc-----CCceEEEecCCCchhHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI-----KGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~-----~g~~~vl~~~~~h~s~~~~~ 185 (480)
+....++.+.++++.+. +.+.|+++||+|+..|++.+|... .++|.... +....|......|.....+.
T Consensus 56 ~~~~~~la~~l~~~~~~--~~v~f~~sGseA~e~AlklAr~~~----~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~ 129 (382)
T PLN00144 56 TIPQVELAKRLVASSFA--DRVFFCNSGTEANEAAIKFARKYQ----RVRAPDKKDPAASSATEFVSFSNSFHGRTLGAL 129 (382)
T ss_pred CHHHHHHHHHHHhcCCC--CeEEEeCCcHHHHHHHHHHHHHHH----hccCCCCccccccccceEEEECCCcccccHHHH
Confidence 34455667777777644 469999999999999999998742 11111000 01225556666777666666
Q ss_pred HHcCCC---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc--C--hHHHHHHHHH
Q psy12303 186 AVCGLG---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD--P--IEEIADICQK 252 (480)
Q Consensus 186 ~~~g~~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~--~--l~~I~~i~~~ 252 (480)
...+.. ...+..+|.+ |+++|++.++. ..+++|+++..+++.|... + +++|.++|++
T Consensus 130 s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~ 199 (382)
T PLN00144 130 ALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDE 199 (382)
T ss_pred hcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 544321 1123444443 78899888742 2378888888888855542 3 8999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
||+++|+|++++++......+.. ...++ ..|+++ +.|.+++++++|+++.+. ++.+.... ... .
T Consensus 200 ~g~llI~DEv~tg~gr~g~~~~~-~~~~~-~PDi~t--~sK~l~~G~pig~v~~~~-~~~~~~~~---~~~-~------- 263 (382)
T PLN00144 200 AGALLVFDEVQCGLGRTGYLWAH-EAYGV-EPDIMT--LAKPLAGGLPIGAVLVTE-KVASAINP---GDH-G------- 263 (382)
T ss_pred cCCEEEEechhhCCCccchHhhh-hhcCC-CCCEEE--ecccccCCcceEEEEEcH-HHHhccCC---CCC-C-------
Confidence 99999999999987553322221 23455 578555 679999888899998753 33332211 000 0
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH-HHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLME-LAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~-l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
.++ .+.+....++.++++.+....+.+.+++..+ +.+.+.+.+.+ .|.+.-+. ..+.++.+.+ .. .
T Consensus 264 ----~T~---~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~-~~~~~~vr-g~G~~~~l~l-~~--~- 330 (382)
T PLN00144 264 ----STF---AGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG-NPHVKEVR-GVGLLVGIQL-DV--P- 330 (382)
T ss_pred ----CCC---CCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh-CCCceeee-cCceEEEEEe-cC--c-
Confidence 000 1111233344444455533333333322222 33334444455 44432221 2233333332 10 0
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+.+.+.+.|.++... . . .+++|++ ++...++++|+.+++.|++++.+
T Consensus 331 -------------~~~~~~~~~~~Gv~i~~~-~--~-~~~lrl~-p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 331 -------------AGPLVDACRDSGLLVLTA-G--K-GDVVRLV-PPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred -------------cHHHHHHHHHCCeEEeec-C--C-CCEEEEe-CCCccCHHHHHHHHHHHHHHHHh
Confidence 135678888899654332 1 1 3799999 77778899999999999998765
No 314
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=6.5e-16 Score=149.87 Aligned_cols=220 Identities=18% Similarity=0.161 Sum_probs=157.0
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|+. ++++-|... ++++++|..|+..++.+... +|+ .|+++...|......+
T Consensus 53 gnPt~~~le~~----la~Le~g~~--a~~~~SGmaAi~~~l~~ll~--------------~Gd-~iv~~~~~Y~~t~~~~ 111 (386)
T PF01053_consen 53 GNPTVRALEQR----LAALEGGED--ALLFSSGMAAISAALLALLK--------------PGD-HIVASDDLYGGTYRLL 111 (386)
T ss_dssp C-HHHHHHHHH----HHHHHT-SE--EEEESSHHHHHHHHHHHHS---------------TTB-EEEEESSSSHHHHHHH
T ss_pred ccccHHHHHHH----HHHhhcccc--eeeccchHHHHHHHHHhhcc--------------cCC-ceEecCCccCcchhhh
Confidence 45665666655 788887744 88899999999888887754 556 5667777776666655
Q ss_pred HH----cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC-cEEEee
Q psy12303 186 AV----CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN-MWLHVD 260 (480)
Q Consensus 186 ~~----~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~-~~l~vD 260 (480)
+. .|+ ++.+++.+ |+++++++++++ +++|++..++||+..+.||++|+++|+++| ++++||
T Consensus 112 ~~~l~~~gv---~v~~~d~~-----d~~~l~~~l~~~------t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD 177 (386)
T PF01053_consen 112 EELLPRFGV---EVTFVDPT-----DLEALEAALRPN------TKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD 177 (386)
T ss_dssp HHCHHHTTS---EEEEESTT-----SHHHHHHHHCTT------EEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE
T ss_pred hhhhcccCc---EEEEeCch-----hHHHHHhhcccc------ceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee
Confidence 54 355 77777654 899999999886 999999999999999999999999999998 999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCc-hhhHhhhcCCcccccccccccCcccCCC
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQD-GLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
.+++.+...- ...+ ++|+++.|..|++++.-. .|++++++. .+........ ..
T Consensus 178 nT~atp~~~~-pL~~-------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~-------------- 233 (386)
T PF01053_consen 178 NTFATPYNQN-PLEL-------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR--RL-------------- 233 (386)
T ss_dssp CTTTHTTTC--GGGG-------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH--HH--------------
T ss_pred ccccceeeec-cCcC-------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh--hh--------------
Confidence 9998875433 3455 899999999999985432 577776663 3332221100 00
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.|....+..+|+.++ |.+.+..+++++.+++..+.+.|++ +|.++-+
T Consensus 234 -----~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~-hp~V~~V 280 (386)
T PF01053_consen 234 -----LGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEE-HPKVKRV 280 (386)
T ss_dssp -----HT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHT-STTEEEE
T ss_pred -----cCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHh-CCCCCeE
Confidence 111235667777766 4678889999999999999999999 8988743
No 315
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.74 E-value=2e-15 Score=150.44 Aligned_cols=309 Identities=16% Similarity=0.116 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHhCCCC--C-CeEE-CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 112 LMETVVLEKMRQIIGWQG--G-DSIL-APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~--~-~~~~-t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
....++.+.+++++..+. . .+.| ++|||+|+..|++.||.. .|. +.+|......|.....+...
T Consensus 82 ~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~ls~ 149 (425)
T PRK09264 82 TAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV-------TGR-----TNIVAFTNGFHGMTLGSLAV 149 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh-------cCC-----CeEEEECCccCCccHHHHHh
Confidence 445566777777653321 1 3556 489999999999999874 221 22444555567766555554
Q ss_pred cCC-------C--CCCeEEeeCCCCC--C-CCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHHHHHH
Q psy12303 188 CGL-------G--TDNCVEVPSDKRG--R-LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIADICQ 251 (480)
Q Consensus 188 ~g~-------~--~~~v~~v~~~~~~--~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~~i~~ 251 (480)
.+. + ...+..+|..... . -|+++|++.+++.......+++|+++..+...|.+. .+++|.++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~ 229 (425)
T PRK09264 150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR 229 (425)
T ss_pred cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence 331 1 1234556653211 1 267788888865321123478999999988888653 4999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
+||+++++|++|+++......+.. ...++ ..|++++ .|.++. +.++|++++++. . ... ..... .
T Consensus 230 ~~g~llI~DEV~tG~GrtG~~~~~-~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~~-i-~~~---~~~~~-~----- 294 (425)
T PRK09264 230 KHDILLIVDDIQAGCGRTGTFFSF-ERAGI-TPDIVTL--SKSISGYGLPMALVLIKPE-L-DVW---KPGEH-N----- 294 (425)
T ss_pred HcCcEEEEechhhCCccccHHHHH-hhcCC-CCCEEEe--ccccCCCccceEEEEEchh-h-hcc---CCCcc-C-----
Confidence 999999999999875433322222 22344 6788875 599886 677899988644 2 211 11000 0
Q ss_pred CcccCCCCccccCCCCCCchHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeE-EEEEee
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQW-RAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVN-VSFWYL 405 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l-~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~-v~f~~~ 405 (480)
+++ .+......+..+++ ..+.. .+..++..++.++|.+.|++. .+.+ +...+..+. +.+.+.
T Consensus 295 ------~T~---~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~ 361 (425)
T PRK09264 295 ------GTF---RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFG 361 (425)
T ss_pred ------CCC---CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEec
Confidence 000 11111222333444 22222 245566666777777766540 2322 111122222 233221
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+. .....+.+.+.++|.++... .. . ...+|++ ++..+|++||++++++|++.+++
T Consensus 362 ~~---------------~~~~~l~~~~~~~Gv~~~~~-~~-~-~~~lr~~-p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 362 DG---------------ELAGKIAAEAFENGLIIETS-GP-E-DEVVKLL-PPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred Ch---------------HHHHHHHHHHHHCCCEEecc-CC-C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 10 01246778888999655332 11 1 3689998 88999999999999999987653
No 316
>PRK07482 hypothetical protein; Provisional
Probab=99.74 E-value=4.7e-15 Score=148.63 Aligned_cols=329 Identities=13% Similarity=0.071 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g 189 (480)
++...++.+.+++++..+-..+.|++|||+|+..|++.||... ..+|. +++..|+. ....|.....+....|
T Consensus 93 ~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~----~~~g~---~~r~~Ii~~~~~YHG~t~ga~s~~~ 165 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYN----NVLGR---PEKKKIISRWRGYHGSGVVTGSLTG 165 (461)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHH----HhcCC---CCCceEEEecCccCCccHhhhhccC
Confidence 4556677888888875333468999999999999999998641 11232 22334544 4556665444433332
Q ss_pred C-------C--CCCeEEeeCCCCCC-------------CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 L-------G--TDNCVEVPSDKRGR-------------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~-------~--~~~v~~v~~~~~~~-------------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
. + ...+..++.....+ -++++|++.+... .+..+++|+++..+...|.+.| +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl 243 (461)
T PRK07482 166 LSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYW 243 (461)
T ss_pred CchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHH
Confidence 1 1 11233333221111 0356667666421 2244899999998888887754 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc--
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA-- 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~-- 320 (480)
++|.++|++||+++|+|+++.|+......+.. ...|+ .+|+++ +.|.+++++ +.|+++++++ +.........
T Consensus 244 ~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~--~gKgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~ 318 (461)
T PRK07482 244 PAIQAVLKKYDILLIADEVVTGFGRLGSMFGS-DHYGI-EPDLIT--VAKGLTSAYAPLSGSIVGEK-VWDVLEQGSDEH 318 (461)
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCcchhhH-HhcCC-CCCEEE--EccccccCccccceeeecHH-HHHHHhcccccC
Confidence 99999999999999999999988665555444 44566 699999 469998875 7888887643 3322211000
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCce
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEM 397 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~ 397 (480)
..+.+. + ++ .+.+....++.++|+.+..+ +..++..++.++|.+.|++. ++-+.-+ .-..
T Consensus 319 ~~~~h~----------~--T~-~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~G 381 (461)
T PRK07482 319 GAIGHG----------W--TY-SGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV-RGVG 381 (461)
T ss_pred CccccC----------C--CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-eece
Confidence 000000 0 00 12222333344444444333 34566667777777776541 3322211 1223
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.++.+.+.......... ... ..+...+...+.++|.++.. .. + .+.+|+. ++..+|++||+++++++++.+
T Consensus 382 lm~giel~~~~~~~~~~-~~~---~~~~~~i~~~~~~~Gvl~~~-~~--~-~~~i~~~-Ppl~it~~ei~~~~~~l~~~l 452 (461)
T PRK07482 382 MLAAVEFVADRDDRTPF-DPA---LKIGPQVSAAALERGVIARA-MP--H-GDILGFA-PPLVLTRAEADEIVAIAKDAV 452 (461)
T ss_pred eEEEEEeccCCCcCCCC-Chh---hHHHHHHHHHHHHCCcEEec-CC--C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHH
Confidence 33334333211000000 000 01235677888999955422 11 2 3689998 899999999999999998876
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 453 ~~ 454 (461)
T PRK07482 453 DE 454 (461)
T ss_pred HH
Confidence 53
No 317
>KOG2040|consensus
Probab=99.74 E-value=3.6e-16 Score=151.38 Aligned_cols=336 Identities=18% Similarity=0.175 Sum_probs=222.6
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCCeEECC-ChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGDSILAP-GGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS 183 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~-ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~ 183 (480)
+...+..++-.++..+++++.|++. +.|.+ +|..+-..+|++.|... ..+|... +.+.+++-.+|.....
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~--~s~QPNsGA~GEYaGL~~IRaY~----~~kge~h---RnvClIPvSAHGTNPA 645 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDS--FSLQPNSGAQGEYAGLRVIRAYL----ESKGEGH---RNVCLIPVSAHGTNPA 645 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccc--eeecCCCCcccchhhHHHHHHHH----HhccCCc---ceeEEEeecccCCChh
Confidence 3456677888899999999999986 55544 45555666666666542 2234322 3488999999999999
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc-ChHHHHHHHHHcCcEEEeecc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD-PIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~-~l~~I~~i~~~~~~~l~vD~a 262 (480)
.+.+.|+ +|+.|.++.+|.+|..+|+++.++..++ -+++.+|.|+| .|.+. .+++++++.++||--+..|||
T Consensus 646 SA~Magm---kvvpV~~~~~G~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGA 718 (1001)
T KOG2040|consen 646 SAAMAGM---KVVPVGCDANGNIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGA 718 (1001)
T ss_pred hHHhcCC---EEEEeeccCCCCccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCC
Confidence 9999999 8999999999999999999998876543 78999999976 58885 599999999999999999997
Q ss_pred cccccc-ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcc----cCCC
Q psy12303 263 WGGGLL-LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR----YDTG 337 (480)
Q Consensus 263 ~~~~~~-~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~ 337 (480)
.--..+ .+..... ++|+.-.++||.++.|.|.|.--+..-.... ..++|+.+.+...... -..+
T Consensus 719 NMNAqVGlc~pGd~-------GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~----HLapfLP~HpVvs~~~~~~~~~~g 787 (1001)
T KOG2040|consen 719 NMNAQVGLCRPGDI-------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK----HLAPFLPSHPVVSPGRPEDTSPVG 787 (1001)
T ss_pred CccceecccCCccc-------cccceeecccceeeecCCCCCCCCCccchhh----hccccCCCCCccCCCCCCCCCCcc
Confidence 654433 2333334 8999999999999988765544333322211 2345554432221110 0011
Q ss_pred Ccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhh
Q psy12303 338 DKV-IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 338 ~~~-~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 416 (480)
..+ -+.|...-..-.|+.++.+|..|+...-+-.+-+++|+.++|+. + ++++.....+.+.-.|+- +++.....
T Consensus 788 sVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~-h--Ykil~~~~~~~vaHEFIl-D~r~fK~~- 862 (1001)
T KOG2040|consen 788 SVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES-H--YKILFRGENGLVAHEFIL-DLRPFKKT- 862 (1001)
T ss_pred ceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh-c--cceeEecCCcceeeeeee-echhhccc-
Confidence 110 01111112235789999999999999989899999999999998 4 333333333344333321 11111100
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+. ..++.+||++-|.-..+. .|.- .+.+-+- +...-+++++|++++++-.+.+|
T Consensus 863 --agie--avDvAKRL~DYgFHaPTm-swPV-~gtLMIE-PTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 863 --AGIE--AVDVAKRLMDYGFHAPTM-SWPV-AGTLMIE-PTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred --cCCc--HHHHHHHHHhccCCCCcc-cccc-CCceEec-cCccccHHHHHHHHHHHHHHHHH
Confidence 0011 346889999888322221 2332 4677776 77777889999999998766554
No 318
>PRK07480 putative aminotransferase; Validated
Probab=99.74 E-value=4.8e-15 Score=148.22 Aligned_cols=326 Identities=16% Similarity=0.121 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g 189 (480)
.....++.+.++++++.+-..+.|+++||+|+..|++.+|... ...|. +++.+|+. ....|.....+....|
T Consensus 93 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~tl~a~s~~g 165 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYW----ALKGK---PQKKVIISRKNGYHGSTVAGASLGG 165 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCcchhhhhccC
Confidence 4555667788888875433479999999999999999998741 11232 22334444 4456765544444333
Q ss_pred CC---------CCCeEEeeCCCCC----CCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 190 LG---------TDNCVEVPSDKRG----RLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~----~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
.. ...+..++....+ ..+ .+.|++.+.+. .+..+++|+++..+...|.+.| ++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~yl~ 243 (456)
T PRK07480 166 MKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATYWP 243 (456)
T ss_pred ChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHH
Confidence 21 1123333322110 111 24455444321 2245899999999888888866 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCcccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
+|.++|++||+.+|+|+++.|+......+.. ...++ .+|+++ +.|.+++++ +.|+++.++ ++..........+.
T Consensus 244 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~--~gK~l~gG~~Pi~av~~~~-~i~~~~~~~~~~~~ 318 (456)
T PRK07480 244 EIQRICRKYDILLVADEVICGFGRTGEWFGS-QHFGI-KPDLMT--IAKGLTSGYIPMGAVGVGD-RVAEVLIEEGGEFN 318 (456)
T ss_pred HHHHHHHHcCCEEEEechhhCCCcCcchhhh-hhcCC-CCCeee--eehhhccCCccceEEEEcH-HHHHHHhcCCCCcc
Confidence 9999999999999999999877554444333 34466 689988 569988764 788888754 34333211111111
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCCeEEecC--CceeEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRL-MELAEYMVKKIKSMPDKFYLILE--PEMVNV 400 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~-~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v 400 (480)
+. +++ .+.+....++.++|+.+-.+ ...++. .++.++|.+.|++ +....++.. -.+.++
T Consensus 319 -~~----------~T~---~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~~g~~l~~~l~~-l~~~~~i~~vrG~Glm~ 380 (456)
T PRK07480 319 -HG----------FTY---SGHPVAAAVALANLRILRDE---GIVERVRDDTGPYLQKRLRE-LADHPLVGEVRGVGLVG 380 (456)
T ss_pred -cC----------CCC---CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH-hhcCCCeeeEEeecceE
Confidence 10 001 12222333444445444333 344555 3566666666655 322222211 122333
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+........ .+.. .......+...+.++|.++... .+.+|++ +....|++|||++++.|++.+++
T Consensus 381 gie~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~Gll~~~~------~~~l~~~-Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 381 AIELVKDKATRE---RFEA-GGGVGTICRDHCFANGLIMRAV------GDRMIIS-PPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred EEEEeccccccc---cCcc-hhhHHHHHHHHHHHCCcEEeec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 343332211000 0000 0011245677888999654321 2579998 88899999999999999887653
No 319
>PRK07036 hypothetical protein; Provisional
Probab=99.74 E-value=7e-15 Score=147.47 Aligned_cols=326 Identities=13% Similarity=0.106 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.+++++..+-..+.|++|||+|+..|++.||... ..+|. +++. +|......|.....+....+
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~---t~r~~Ii~~~~~YHG~t~~a~s~~~ 166 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYF----NVRGR---PAKKHIITRGDAYHGSTYLTASLTG 166 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHH----HhcCC---CCccEEEEEcCccCCccHhhhcccC
Confidence 4555667778888764433569999999999999999998641 11222 2222 44445556766545444433
Q ss_pred CCC---------CCeEEeeCCCC----CCCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 190 LGT---------DNCVEVPSDKR----GRLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 190 ~~~---------~~v~~v~~~~~----~~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
... ..+..+|.... ..+. ++.+++.+.. ..+..+++|+++..+...|.+.| ++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~ 244 (466)
T PRK07036 167 KAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHA 244 (466)
T ss_pred CCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHH
Confidence 210 12334443211 1111 2334444432 12345899999999888898877 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcC-Ccc-
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQM-SAE- 321 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~-~~~- 321 (480)
+|.++|++||+++|+|+++.++......+......++ .+|++++ .|.+++++ ++|++++++ ++.+..... ...
T Consensus 245 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~-~i~~~~~~~~~~~~ 320 (466)
T PRK07036 245 RMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISE-RLLDVISGPNAKGN 320 (466)
T ss_pred HHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcH-HHHHHHhcccCcCc
Confidence 9999999999999999999877554433222013455 6899884 69998874 788888754 344332211 001
Q ss_pred -cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--Ccee
Q psy12303 322 -YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMV 398 (480)
Q Consensus 322 -~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~ 398 (480)
+... .++ .+.+....++.++|+.+.. .++.++..++.++|.+.|++ +....++.. -.+.
T Consensus 321 ~~~~~-----------~T~---~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~v~~vrG~Gl 382 (466)
T PRK07036 321 VFTHG-----------FTY---SGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLAS-LRELPLVGDVRGDHL 382 (466)
T ss_pred ccccC-----------CCC---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-hccCCCEEEEEeece
Confidence 1110 000 1111222333333444322 34567778888888887766 422222221 2223
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++.+.+....... +...... .....+...+.++|.++... .+.+|++ +...+|++||+++++++.+.++
T Consensus 383 ~~~ve~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~Gvl~~~~------~~~~~l~-Ppl~it~~~id~~~~~l~~al~ 451 (466)
T PRK07036 383 MACVECVADKGSK-ALLPEDI---AIGQRIDRHCQERGLLVRPL------EHLCVLS-PPLIITRAQIDEIVAILRAAIE 451 (466)
T ss_pred EEEEEEccCcccc-CCCCchh---HHHHHHHHHHHHCCcEEeec------CCEEEEe-CCCcCCHHHHHHHHHHHHHHHH
Confidence 3344443221110 0000000 12346778888999554321 2578888 8888999999999999987764
No 320
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=1e-14 Score=145.40 Aligned_cols=314 Identities=13% Similarity=0.085 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-
Q psy12303 113 METVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL- 190 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~- 190 (480)
.+.++.+.+++++.-. ...+.|+++||+|+..|++.||.. .|. +.+|......|.....++...+.
T Consensus 77 ~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~~~~~~~ 144 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY-------TGR-----PGVVAFDHGFHGRTNMTMALTAKV 144 (420)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh-------cCC-----CcEEEECCCcCCCcHHHHHhcCCC
Confidence 3445677787776432 246999999999999999999874 222 22555666677776666654331
Q ss_pred -------C--CCCeEEeeCCCCCC-------C----CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHH
Q psy12303 191 -------G--TDNCVEVPSDKRGR-------L----IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEI 246 (480)
Q Consensus 191 -------~--~~~v~~v~~~~~~~-------~----d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I 246 (480)
+ ...+..+|.....+ . +++.+++.+... ..+..+++|+++..+..+|.+.| +++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l 223 (420)
T TIGR00700 145 MPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPAL 223 (420)
T ss_pred cccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHH
Confidence 1 12344444421111 1 144566655311 12345899999999998998766 8999
Q ss_pred HHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccc
Q psy12303 247 ADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 247 ~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
.++|++||+++++|++|.++......+.. ...++ ..|+++ +.|.++++++.|+++.++ ++.+.... ... .
T Consensus 224 ~~lc~~~gillI~DEV~tg~gr~g~~~a~-~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~-~i~~~~~~---~~~-~- 293 (420)
T TIGR00700 224 LDWCREHGIVFIADEVQTGFARTGAMFAC-EHEGP-EPDLIT--TAKSLADGLPLSGVTGRA-EIMDAPAP---GGL-G- 293 (420)
T ss_pred HHHHHHcCCEEEEEecccCCcccchhHHH-hhcCC-CCCEEE--eeccccCCcceEEEEecH-HHHhhcCC---CCc-C-
Confidence 99999999999999999987553322221 22233 578766 679999888899988753 44332211 000 0
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~ 403 (480)
.+ + ++.+....++.++++.+..+.+ .++..++.+++.+.|++. ++.+.-+ .+.+.++.+.
T Consensus 294 ----------~T--~-~~~pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~ 356 (420)
T TIGR00700 294 ----------GT--Y-AGNPLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMIAVE 356 (420)
T ss_pred ----------CC--C-CcCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEEEEE
Confidence 00 0 1111222233333444433333 334444444454444330 4444333 3445555555
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.+.. ...+.. .....+.+.+.++|.++... ... .+++|++ +....++++|++.+++|.+.++
T Consensus 357 ~~~~~-~~~~~~-------~~~~~l~~~~~~~Gv~i~p~-~~f--~~~lRl~-p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 357 LVDPG-TTEPDA-------GLAERIATAAHAAGLLLLTC-GMF--GNIIRFL-PPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EecCC-CCCccH-------HHHHHHHHHHHHCCeEEecc-CCC--CCEEEEE-CCCCcCHHHHHHHHHHHHHHhh
Confidence 53221 000010 11346677788899655432 222 3699999 7677899999999999998764
No 321
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=1.4e-14 Score=144.73 Aligned_cols=316 Identities=14% Similarity=0.093 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.++++++-. ...+.|+++||+|+..|++.||.. .|. +.+|......|.....++...+
T Consensus 84 ~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~-------tgr-----~~ii~~~~~YHG~t~~als~s~ 151 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAY-------TGR-----PYIISFTNAYHGSTYGSLSMSG 151 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh-------hCC-----CeEEEECCCcCCCcHHHHhhcC
Confidence 355566778888887533 246899999999999999999864 221 2245556667877766665544
Q ss_pred CC----------CCCeEEeeCCCCC-----CCCH-------HHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 LG----------TDNCVEVPSDKRG-----RLIP-------SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~----------~~~v~~v~~~~~~-----~~d~-------~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
.. ...+..+|..+.. ..+. +++++.++.. .....+++|+++......|.+.| +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavI~EPv~g~gG~~~~~~~yl 230 (445)
T PRK08593 152 ISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKY-LPADEVACIVIETIQGDGGLLEPVPGYF 230 (445)
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhh-cCCCceEEEEEccccCCCCCcCCCHHHH
Confidence 21 1134455543221 1122 2333333221 01235899999999998898866 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
++|.++|++||+++++|+++.++......+.. ...++ ..|+++ +.|.++++++.|+++.+ +++.+.... ..+.
T Consensus 231 ~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~-~~~gv-~pDi~t--~gK~l~~G~p~gav~~~-~~i~~~~~~--~~~~ 303 (445)
T PRK08593 231 EALYKFCREHGILFAVDDIQQGLGRTGKWSSI-SHFNI-TPDLMS--FGKSLAGGMPMSAIVGR-KEIMESLEA--PAHL 303 (445)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchHHHH-HhcCC-CCCEee--ecccccCCcccEEEEEc-HHHHhhhcc--CCCC
Confidence 99999999999999999999765443222212 22344 578877 56999877778888865 344433211 1110
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecC--CceeEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILE--PEMVNV 400 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~--~~~~~v 400 (480)
. +. .+.+....++.++++.+-.+ +..++..++.++|.+.|++ + ....++.. -...++
T Consensus 304 ~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~-l~~~~~~v~~vrG~Gl~~ 363 (445)
T PRK08593 304 F---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQ-WVSKYNFVGDVRGYGLSI 363 (445)
T ss_pred C---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHH-HHhcCCcEEEEeccceEE
Confidence 0 00 11112233344444444322 4556777777777777765 2 11112221 122222
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+.+.......+. .....+.+.+.++|.++ ... + .+.+|++ ++..+|++||+++++++++.+++
T Consensus 364 gi~l~~~~~~~~~~~-------~~~~~~~~~~~~~Gv~~-~~~---~-~~~lr~~-p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 364 GIDIVSDKKLKTRDN-------EAALKICNYCFEHGVVI-IAV---A-GNVLRFQ-PPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred EEEEecCCCcCCCcH-------HHHHHHHHHHHHCCeEE-ecc---C-CCEEEEE-CCCccCHHHHHHHHHHHHHHHHH
Confidence 333322111000000 11346778888999544 221 2 3689999 99999999999999999987653
No 322
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=9.4e-15 Score=145.30 Aligned_cols=315 Identities=14% Similarity=0.092 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+.++++++.+ ...+.|+++||+|+..|++.||.. .|. +.+|......|.....++...+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~s~t~~ 150 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAY-------TGR-----PGVIAFGGAFHGRTLLTMALTGK 150 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHh-------hCC-----CeEEEEcCCcCCccHHHHhhcCC
Confidence 33445667788876532 246999999999999999999874 221 22444555667776666554332
Q ss_pred C----------CCCeEEeeCCCC-CC----CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cC---hHHHHHHHH
Q psy12303 191 G----------TDNCVEVPSDKR-GR----LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DP---IEEIADICQ 251 (480)
Q Consensus 191 ~----------~~~v~~v~~~~~-~~----~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~---l~~I~~i~~ 251 (480)
. ...+..+|.... .. -+++.+++.+++. ..+..+++|+++..+...|.. .| +++|.++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~ 229 (421)
T PRK06777 151 VAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCD 229 (421)
T ss_pred CcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 0 012333333221 11 1355677766531 122348899999998888854 34 899999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+++++|++|.++......+.. ...++ ..|+++ +.|.+++++++|+++.+ +++.+..... ...
T Consensus 230 ~~g~llI~DEv~tg~gr~g~~~~~-~~~~~-~pDiv~--~sK~l~~G~pigav~~~-~~i~~~~~~~---~~~------- 294 (421)
T PRK06777 230 EHGILLIADEVQTGFARTGKLFAM-EYYDV-KPDLIT--MAKSLGGGMPISAVVGR-AEVMDAPAPG---GLG------- 294 (421)
T ss_pred HcCCEEEEechhhCCccCCchhhh-hhcCC-CCCEEe--eehhhcCCCceEEEEEc-HHHHhccCCC---CCC-------
Confidence 999999999999976443322221 22233 578765 67999877889998875 3443322110 000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
. ++ ++.+....++.++|+.+.. +++.++..++.++|.+.|++. .+.+.-+ .+...++.+.+..+.
T Consensus 295 -----~--T~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~ 362 (421)
T PRK06777 295 -----G--TY-AGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ 362 (421)
T ss_pred -----C--CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc
Confidence 0 00 1211223333334443322 456677777777877777651 2433332 455555555443221
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. ..+..+ ....+.+.+.++|.++ .+.... .+++|++ +....|+++|++++++|++.+.
T Consensus 363 ~-~~~~~~-------~~~~l~~~~~~~Gv~i-~~~~~~--g~~lr~~-ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 363 T-GKPSPE-------FTRQYQRQALEEGLLL-LSCGVH--GNVIRFL-YPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred c-CCccHH-------HHHHHHHHHHhCCeEE-eecCCC--CCEEEEe-CCCCCCHHHHHHHHHHHHHHHh
Confidence 0 111101 1345667778888554 332222 3699999 8778999999999999988764
No 323
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=6.4e-15 Score=147.22 Aligned_cols=315 Identities=16% Similarity=0.113 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL- 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~- 190 (480)
....++.+.++++++.....+.|+++||+|+..|++.||.. .|. ..+|......|.....+....+.
T Consensus 96 ~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~a~s~~~~~ 163 (457)
T PRK05639 96 ERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS-------TRR-----PWILAFIGAYHGQTLGATSVAAFQ 163 (457)
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh-------cCC-----CeEEEECCCcCCccHHHHHHcCCC
Confidence 44456778888887644357999999999999999999864 221 22444455667766655554331
Q ss_pred -------C--CCCeEEeeCCCCCC--------CCHHH--------HHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 191 -------G--TDNCVEVPSDKRGR--------LIPSE--------LERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 191 -------~--~~~v~~v~~~~~~~--------~d~~~--------L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
+ ...+..+|.....+ -+.++ |++.+......+..+++|+++..+...|.+.|
T Consensus 164 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~ 243 (457)
T PRK05639 164 SSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPEN 243 (457)
T ss_pred cccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHH
Confidence 1 12355666543211 12332 33333221112345899999999888888755
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
+++|.++|++||+++++|++++|+......+.. ...++ .+|+++ +.|.++++++.|+++.++. +.. .. ...
T Consensus 244 yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~-~~~gv-~PDiv~--~gK~l~gG~pi~av~~~~~-i~~-~~--~~~ 315 (457)
T PRK05639 244 FFKELKKLLDEHGILLVMDEVQTGIGRTGKWFAS-EWFEV-KPDLII--FGKGVASGMGLSGVIGRKE-LMD-LT--SGS 315 (457)
T ss_pred HHHHHHHHHHHcCCEEEEechhhccCcCchHHHH-HhcCC-CCCEEE--echhhcCCCcceeEEehHH-HHh-hc--CCC
Confidence 899999999999999999999976444433232 33455 689999 5799987788888886543 333 11 111
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecC--Ccee
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILE--PEMV 398 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~--~~~~ 398 (480)
+.. +. .+.+....++.++|+.+.. +...++..++.++|.+.|++ + .+..++.+ -...
T Consensus 316 ~~~---------------T~-~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~~~~~VrG~Gl 375 (457)
T PRK05639 316 ALL---------------TP-AANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLE-MKESFEVIGDVRGKGL 375 (457)
T ss_pred ccc---------------CC-CcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHH-HHHhCCCEEeecccee
Confidence 110 00 1111223333444444433 33456666777777777765 3 12222222 2233
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++.+.+..+... ... .....+.+.+.++|.++ .... .+ .+.+|+. +...+|++|||++++++++.++
T Consensus 376 ~~gve~~~~~~~--~~~-------~~~~~~~~~~~~~Gv~~-~~~g-~~-~~~lr~~-Ppl~it~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 376 MIGVEIVKENGK--PDP-------ELTGKICWRAFELGLIL-PSYG-MF-GNVIRIT-PPLVITKEIAEKGLEIMERAIK 442 (457)
T ss_pred EEEEEEecCCCC--CCH-------HHHHHHHHHHHhCCeEE-eecC-CC-CCEEEEe-CCCccCHHHHHHHHHHHHHHHH
Confidence 344444322110 000 11246778888898554 3321 11 3699999 9999999999999999998765
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 443 ~ 443 (457)
T PRK05639 443 D 443 (457)
T ss_pred H
Confidence 3
No 324
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.74 E-value=6.3e-16 Score=157.92 Aligned_cols=310 Identities=17% Similarity=0.166 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
-.+..+.+|+.||++. .-++++|+|.+|..++.++.. ||+ .|+++..+|-|+..++.+.|+
T Consensus 197 i~eAe~~AA~~fgAd~-tyfvvNGTS~~n~av~~a~~~--------------~Gd-~VLvdRN~HKSv~haLilsga--- 257 (714)
T PRK15400 197 HKEAEEYIARVFNADR-SYMVTNGTSTANKIVGMYSAP--------------AGS-TVLIDRNCHKSLTHLMMMSDV--- 257 (714)
T ss_pred HHHHHHHHHHHhCCCc-EEEEeCchHHHHHHHHHHhcC--------------CCC-EEEeecccHHHHHHHHHHcCC---
Confidence 3455677999999986 467888889999988888765 556 899999999999999999998
Q ss_pred CeEEeeCCC--C---CCCC-----HHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 194 NCVEVPSDK--R---GRLI-----PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 194 ~v~~v~~~~--~---~~~d-----~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
..++++... . +.++ .+.++++|++..+ -.+|+.++++++ |..|.+.++++|.++|+.++ +|||+||
T Consensus 258 ~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 258 TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred eEEEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccc
Confidence 556765432 1 2455 8899999976532 234668999999 78899999999999999887 7999999
Q ss_pred cccccccccccC-cccCCCCCC---c--cceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 264 GGGLLLSKKYRH-PRLTGIERA---D--SVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 264 ~~~~~~~~~~~~-~~~~~~~~~---D--~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++...+.+.++. .-+. .++ | +++-|.||.+.+-...+.+.++..--.... ...|...+
T Consensus 334 gah~~F~p~~~~~sam~--~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~---n~a~~m~~----------- 397 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMS--GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETF---NEAYMMHT----------- 397 (714)
T ss_pred hhhhccCcccCCcChhh--cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHH---HHHHHHHc-----------
Confidence 999877776531 0121 244 5 899999999998777777776542100000 00111110
Q ss_pred CccccCCCCC----CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC------eEEecCCce-eEEEEEeec
Q psy12303 338 DKVIQCGRHN----DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK------FYLILEPEM-VNVSFWYLP 406 (480)
Q Consensus 338 ~~~~~~~r~~----~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g------~~~~~~~~~-~~v~f~~~~ 406 (480)
.+.+. +++.....+.. +..| .++.++..+++..+++.|.+ +++ ++++.+... ..-||.+.|
T Consensus 398 -----STSPsY~l~ASLD~a~~~m~-~~~G-~~l~~~~i~~a~~~R~~l~~-~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 398 -----TTSPHYGIVASTETAAAMMK-GNAG-KRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred -----CCCcHHHHHHHHHHHHHHHH-hhhh-HHHHHHHHHHHHHHHHHHHh-CCCcccCceEEecChhhcccchhcccCc
Confidence 01111 22222222111 1223 56778888888899999988 777 777642210 111232222
Q ss_pred CccC----C-------CchhhH---HHH------h--hhh-hHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCH
Q psy12303 407 TRVR----N-------MPHEKR---LNI------L--GEI-TPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTE 463 (480)
Q Consensus 407 ~~~~----~-------~~~~~~---~~~------l--~~~-~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~ 463 (480)
..-. + .+..++ ... + ..+ +..+.+.|.+.| +.+..+. .+.+-+. .++..|+
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~g-I~~E~~d----~~~iLfl-~s~g~t~ 543 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHG-IVVEKTG----PYNLLFL-FSIGIDK 543 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcC-CEEEecC----CCeEEEE-eCCCCCH
Confidence 1100 0 000000 000 0 011 234566776676 4444422 3556666 7789999
Q ss_pred HHHHHHHHHHHHh
Q psy12303 464 GDIDFLLTEMDRL 476 (480)
Q Consensus 464 ~di~~~~~~l~~~ 476 (480)
++++.++++|.++
T Consensus 544 ~~~~~L~~aL~~f 556 (714)
T PRK15400 544 TKALSLLRALTDF 556 (714)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 325
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=9.8e-15 Score=145.90 Aligned_cols=319 Identities=9% Similarity=0.060 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.++++++.+-..+.|+++||+|+..|++.|+... ..+|. +|+. +|......|.....+....|.
T Consensus 97 ~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~----~~rg~---~~r~~Ii~~~~~yHG~t~gals~~~~ 169 (453)
T PRK06943 97 EPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAW----RNRGR---GDKREFVCLANGYHGETIGALGVTDV 169 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHH----HHhCC---CCCCEEEEECCCcCCCcHHhhcccCC
Confidence 445567788888876433469999999999999999997641 11222 2222 455555566655555544432
Q ss_pred C---------CCCeEEeeCCCCCC------------CCHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC----hH
Q psy12303 191 G---------TDNCVEVPSDKRGR------------LIPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP----IE 244 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~----l~ 244 (480)
. ...+..+|...... -+++++++.++. .+..+++|+++. .+...|.+.| ++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~ 246 (453)
T PRK06943 170 ALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLR 246 (453)
T ss_pred hhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHH
Confidence 1 01233444322110 124666766653 234589999988 4777787654 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc-cc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA-EY 322 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~-~~ 322 (480)
++.++|++||+.+|+|+++.|+......+.. ...++ .+|++++ .|.+++++ +.|+++.+++ +......... ..
T Consensus 247 ~lr~lc~~~gillI~DEV~TG~GRtG~~fa~-~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e-i~~~~~~~~~~~~ 321 (453)
T PRK06943 247 GLRALCDRYGVHLIADEIAVGCGRTGTFFAC-EQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA-IFAAFYDDDVTRG 321 (453)
T ss_pred HHHHHHHHcCCEEEeechhhCCCCCcchhHH-HhCCC-CCCeEee--ehhhccCcccceEEEEcHH-HHHhhcccCccCC
Confidence 9999999999999999999887665544443 34466 6999995 69998874 8899887653 3332211000 00
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeEEecCCceeEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM--PDKFYLILEPEMVNV 400 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~--~~g~~~~~~~~~~~v 400 (480)
+.+ . .+.....+++.+++..+..-.-++..++..++.++|.+.|++. .+.+.-+ .-.+.++
T Consensus 322 ~~~----------~------~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~ 384 (453)
T PRK06943 322 FLH----------S------HSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIF 384 (453)
T ss_pred ccC----------C------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEE
Confidence 000 0 1111233444444333211111235566777777777777651 2433321 1222233
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+.... .. . . .....+...+.++|.++... .+.+|++ +...+|++||+++++.|++.+++
T Consensus 385 gvel~~~~--~~-~----~---~~~~~i~~~~~~~Gll~~~~------g~~l~~~-Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 385 AFDVALDG--DA-A----R---TFSRRFFEAALERELLLRPI------GTTVYLM-PPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred EEEEccCC--Cc-c----h---HHHHHHHHHHHHCCcEEEec------CCEEEEe-CCCcCCHHHHHHHHHHHHHHHHH
Confidence 33332111 00 0 0 11346778888999654322 2479999 99999999999999999987754
No 326
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=2e-14 Score=143.45 Aligned_cols=313 Identities=15% Similarity=0.135 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
...+.++.+.++++++-+ ...+.|+++||+|+..|++.||.. .|. +.+|......|.....++...+
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~-------tgr-----~~Ii~~~~~yHG~t~~~ls~t~ 163 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYH-------TGR-----KYIIAFLGAFHGRTYGSLSLTA 163 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHH-------hCC-----CeEEEECCCcCCccHHHHHhcC
Confidence 355567788888887532 246999999999999999999964 231 2244455566776666655433
Q ss_pred CC----------CCCeEEeeCCCCCC-----CC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----
Q psy12303 190 LG----------TDNCVEVPSDKRGR-----LI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 190 ~~----------~~~v~~v~~~~~~~-----~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
.. ...+..+|.....+ -+ ++.+++.+-+....+..+++|++.......|.+.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~ 243 (441)
T PRK05769 164 SKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNF 243 (441)
T ss_pred CCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHH
Confidence 10 12344555432111 11 22344422211112345899999999999999888
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
+++|.++|++||+++++|++++++......+.. ...++ ..|++++ .|.++++++.|+++.++. ... .. ...
T Consensus 244 l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~-~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~-i~~-~~---~~~ 314 (441)
T PRK05769 244 FKELRKLADKYGILLIDDEVQTGMGRTGKMFAI-EHFGV-EPDIITL--AKAIAGGLPLGAVIGRAE-LMF-LP---PGS 314 (441)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcccceehh-hccCC-CCCEEEE--cccccCCcccEEEEEehh-hhh-cC---CCC
Confidence 999999999999999999999975443322222 22344 5798874 588887778888886543 322 11 100
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecCC--ceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILEP--EMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~~--~~~~ 399 (480)
.. . ++ .+.+....++.++|+.+.. +..++..++.++|.+.|++ +. .+.++... .+.+
T Consensus 315 ~~------------~--T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~-l~~~~~~~~~vrg~G~~ 374 (441)
T PRK05769 315 HA------------N--TF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKE-LKEKYEFIGDVRGLGLM 374 (441)
T ss_pred CC------------C--CC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-HHHhCCCeeeeecceEE
Confidence 00 0 01 1111233334444444322 5567777888888887765 31 12222221 2233
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.+.... .. .. ......+.+.+.++|.++. + .+ .+.+|++ +...+|++||+++++++++.+++
T Consensus 375 ~~i~~~~~~-~~-~~-------~~~~~~~~~~~~~~Gil~~-~---~~-~~~lr~~-p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 375 IGVELVKDR-KE-PD-------PKLRDKVLYEAFKRGLLLL-G---AG-KSAIRII-PPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEEEeccCC-cc-cc-------HHHHHHHHHHHHhCCcEEe-c---CC-CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 344333221 00 00 0113467788888995543 2 12 4689999 88999999999999999988754
No 327
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=5.3e-15 Score=146.76 Aligned_cols=314 Identities=12% Similarity=0.033 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.+++++..+-..+.|+++||+|+..|++.+|... ..+|. +++. +|......|.....+....+
T Consensus 86 ~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~~a~s~~~ 158 (429)
T PRK06173 86 HEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQ----QAKGE---VQRTKFATIRSGYHGDTWHAMSVCD 158 (429)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHH----HHhCC---CCCcEEEEECCCcCCcchhhhccCC
Confidence 3445567777888775333579999999999999999999641 11232 2232 44455556665444433322
Q ss_pred C----------CCCCeEEeeCCCC-C-----CCCHHHHHHHHHHHHHCCCccEEEEeccC-CCccccccC----hHHHHH
Q psy12303 190 L----------GTDNCVEVPSDKR-G-----RLIPSELERLVLERKAKGDIPFFVNCTSG-TTVLGAFDP----IEEIAD 248 (480)
Q Consensus 190 ~----------~~~~v~~v~~~~~-~-----~~d~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~~----l~~I~~ 248 (480)
- ....+..+|.... . .-+++.|++.++. .+..+++|+++.. +...|.+.| +++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~ 235 (429)
T PRK06173 159 PVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARE 235 (429)
T ss_pred CchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHH
Confidence 1 0112334443211 0 1135566777753 2345899999985 777787643 899999
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc-cccccc
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA-EYLFMQ 326 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~-~~l~~~ 326 (480)
+|++||+++++|+++.|+......+.. ...++ ..|+++ +.|.+++++ ++|.++.+++ +.+....... .+....
T Consensus 236 lc~~~g~llI~DEv~tG~GrtG~~~a~-~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~~~~~~~~~~~~~~~~ 310 (429)
T PRK06173 236 LCDQYGVLLIFDEIATGFGRTGKLFAL-EHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-IAQTICSGEAKCFMHGP 310 (429)
T ss_pred HHHHcCCeEEecchhcCCCcCCcchHH-HhcCC-CCCEEE--eehhhhCCccccceEEecHH-HHHHHhcCCCCccccCC
Confidence 999999999999999765333322222 23455 589888 679998774 6788886543 3332211000 111110
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEe
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWY 404 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~ 404 (480)
++ .+.+....++.++|+.+-.+ ...++..++.++|.+.|++ ..++..+.+ ..+.++.+.+
T Consensus 311 -----------T~---~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~-~~~~~~v~~vRg~Gl~~~iel 372 (429)
T PRK06173 311 -----------TF---MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAP-AAEFDSVAEVRVLGAIGVVEM 372 (429)
T ss_pred -----------CC---CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH-hhcCCCeeeeeccceEEEEEe
Confidence 00 11122333444445544222 3467888888888888876 333332222 1223333333
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.... ....+.+.|.++|.++ ... .+.+|+. +....|++||+++++.|++.+++
T Consensus 373 ~~~~---------------~~~~i~~~l~e~Gi~v-~~~-----g~~l~~~-Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 373 KEPV---------------NMATLQPRFVEHGIWV-RPF-----GKLVYIM-PPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred CCcc---------------cHHHHHHHHHHCCeEE-Eec-----CCEEEEe-CCccCCHHHHHHHHHHHHHHHHH
Confidence 2110 0235778888898543 331 2589999 99999999999999999987753
No 328
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=7.2e-16 Score=150.01 Aligned_cols=229 Identities=13% Similarity=0.122 Sum_probs=157.3
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc----hhH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH----YSV 181 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h----~s~ 181 (480)
..|....+|+. ++++.|.+. ++.+++|+.|+..++.+... ||+ .|+++...| ..+
T Consensus 62 ~~P~~~~lE~~----la~leg~~~--av~~sSG~aAi~~al~all~--------------~GD-~Vl~~~~~yg~t~~~~ 120 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAEH--ALSFSSGMGAITSAILSLIK--------------KGK-RILSISDLYGQTFYFF 120 (384)
T ss_pred CChhHHHHHHH----HHHHhCCCc--EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEecCccchHHHHH
Confidence 55666777766 888888864 78999999999999887643 567 566665432 223
Q ss_pred HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 182 RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 182 ~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
...+...|+ +++++++++...++ +++ .++++|+++.++|+++.+.|+++|.++|++++ ++||+
T Consensus 121 ~~~~~~~Gi---~v~fvd~~~~~~~~-------l~~-----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~ 183 (384)
T PRK06434 121 NKVLKTLGI---HVDYIDTDRLNSLD-------FDP-----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDA 183 (384)
T ss_pred HHHHHhcCc---EEEEECCCChhhee-------ecC-----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEEC
Confidence 355566676 78888876422222 222 12889999999999999999999999999998 56799
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+++.+.. ...... ++|++++|.||+++++.. .|++++++++.......... .
T Consensus 184 t~~s~~~-~~pl~~-------gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~----~-------------- 237 (384)
T PRK06434 184 TFASPYN-QNPLDL-------GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK----T-------------- 237 (384)
T ss_pred CCCCccc-CCchhc-------CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH----h--------------
Confidence 9876543 222233 899999999999998664 56666656544332211000 0
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-----------eeEEEEEe
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-----------MVNVSFWY 404 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-----------~~~v~f~~ 404 (480)
.|.....+.+|+.++. .+.+..++++..+++..+.+.|++ +|.++-+.-|. +++++|.+
T Consensus 238 ---~G~~~~~~~A~l~~~g--L~tL~~R~~r~~~~a~~~a~~L~~-~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l 307 (384)
T PRK06434 238 ---LGSNPDPIQAYLALRG--LKTLGLRMEKHNKNGMELARFLRD-SKKISNVYYPDTEIGKKVLRGFGGMLSFEL 307 (384)
T ss_pred ---cCCCCCHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHc-CCCccEEECCChHHHHHhcCCCCceEEEEE
Confidence 1222345667766554 677889999999999999999999 88875443332 45667754
No 329
>PRK07481 hypothetical protein; Provisional
Probab=99.73 E-value=2.2e-14 Score=143.51 Aligned_cols=328 Identities=12% Similarity=0.062 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHc
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~ 188 (480)
+..+.++.+.++++++-+ -..+.|+++||+|+..|++.||... +..|. +|+. +|......|.....++...
T Consensus 85 ~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~ga~s~~ 157 (449)
T PRK07481 85 HPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYW----KVRGQ---PERTKFISLKQGYHGTHFGGASVN 157 (449)
T ss_pred CHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCcchhhhccC
Confidence 345566778888887421 2468999999999999999998741 11232 2232 4555555676655554433
Q ss_pred CCC---------CCCeEEeeCCCC----CC-CCHHHHHHHHH----HHH--HCCCccEEEEeccCCCccccccC----hH
Q psy12303 189 GLG---------TDNCVEVPSDKR----GR-LIPSELERLVL----ERK--AKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 189 g~~---------~~~v~~v~~~~~----~~-~d~~~L~~~i~----~~~--~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
+.. ...+..++.... +. -|++++++.+. +.. ..+..+++|+++..+...|.+.| ++
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~ 237 (449)
T PRK07481 158 GNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWP 237 (449)
T ss_pred CCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHH
Confidence 211 112334433211 11 24555443332 111 12345899999999888888765 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc--c
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA--E 321 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~--~ 321 (480)
+|.++|++||+++|+|+++.|+......+.. ...++ .+|++++ .|.+++++ ++|+++++++ +......... .
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~ 312 (449)
T PRK07481 238 LVREVCDRHGILLIADEVVTGFGRTGSWFGS-RGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR-IADAFEANADFGG 312 (449)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCcCchhhHh-hhcCC-CCCEEEE--eecccCCCcCceEEEEcHH-HHHHHhccCcccc
Confidence 9999999999999999999987554433333 33455 6899995 69998774 7888887653 4332211100 0
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC--Ccee
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE--PEMV 398 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~--~~~~ 398 (480)
.+.+. +++ .+.+....++.++|+.+.. .+..++..++.++|.+.|++ +. ...++.. -...
T Consensus 313 ~~~h~----------~T~---~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~~i~~vrG~Gl 375 (449)
T PRK07481 313 AIMHG----------YTY---SGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLEGLQP-LKERFELVGDVRGKGL 375 (449)
T ss_pred ccccC----------CCC---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH-HhhcCCCeEEEeecce
Confidence 00000 000 1222233334444444433 34556677777777777766 31 1222222 2223
Q ss_pred EEEEEeecCc-cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 399 NVSFWYLPTR-VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 399 ~v~f~~~~~~-~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
++.+.+.... ..... +.. ......+.+.+.++|.++... + +.+|++ +...+|++|||++++.+++.+
T Consensus 376 m~gi~l~~~~~~~~~~--~~~---~~~~~~~~~~~~~~Gvl~~~~----g--~~i~l~-Ppl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 376 MLALDLVADKATREPI--DPS---KGYANAVADVARENGVLVRPS----G--TKIILS-PPLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred EEEEEecccccccCCC--Cch---hHHHHHHHHHHHhCCeEEEec----C--CEEEEE-CCCCCCHHHHHHHHHHHHHHH
Confidence 3334332211 00000 000 012346778888999544321 2 468998 888899999999999999987
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 444 ~~ 445 (449)
T PRK07481 444 SA 445 (449)
T ss_pred Hh
Confidence 65
No 330
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.73 E-value=1.5e-14 Score=144.64 Aligned_cols=322 Identities=14% Similarity=0.103 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCe-EECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQ--GGDS-ILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~--~~~~-~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
++...++.+.++++++.. .... +++++||+|+..|++.||.. +|. +.+|......|.....+...
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~-------tgr-----~~Ii~~~~~yHG~t~~~~s~ 148 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY-------TGR-----TNVISFSGGFHGMTIGALAV 148 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh-------cCC-----CeEEEEcCCcCCchHHHHhh
Confidence 455566778888887532 1244 44689999999999999975 221 22555566677776666655
Q ss_pred cCCC---------CCCeEEeeCCCCCCC--------CHHHH----HHHHHHHHHCCCccEEEEeccCCCccccccC----
Q psy12303 188 CGLG---------TDNCVEVPSDKRGRL--------IPSEL----ERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 188 ~g~~---------~~~v~~v~~~~~~~~--------d~~~L----~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
.+.. ...+..+|.....+. +.+.+ ++.++........+++|+++..+...|.+.+
T Consensus 149 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~y 228 (442)
T TIGR00709 149 TGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEW 228 (442)
T ss_pred cCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHH
Confidence 4410 113444544322221 12222 3333221112234788999988888887743
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
+++|.++|++||+++|+|+++.++......+.. ...++ ..|+++ +.|.++++++.|+++.+++ . .... ...
T Consensus 229 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~--~gK~l~~G~Pigav~~~~~-~-~~~~---~~~ 299 (442)
T TIGR00709 229 LQKIREVTRKHDIKLILDEVQAGFGRSGTMFAF-EHAGI-EPDFVV--MSKAVGGGLPLAVLLIAPE-F-DAWQ---PAG 299 (442)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCCCCchhHH-HHcCC-CCcEEE--EcccccCCcccEEEEEchH-H-hccC---CCc
Confidence 899999999999999999999987654443333 33455 689999 5799988888999998654 2 2211 100
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC--CceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE--PEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~--~~~~~ 399 (480)
+. . ++ .+.+....++.++|+.+..+ .+.++..++.++|.+.|++ +. ...++.+ -.+.+
T Consensus 300 --~~----------~--T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~-l~~~~~~v~~vrG~Gl~ 360 (442)
T TIGR00709 300 --HT----------G--TF-RGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDD-MIKEHPCIGNVRGRGLM 360 (442)
T ss_pred --CC----------C--CC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH-HHHhCCCeeeeeccceE
Confidence 00 0 00 12222333344444443333 3456677777777777765 21 2222222 23344
Q ss_pred EEEEeecCc-cCCCch-hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTR-VRNMPH-EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~-~~~~~~-~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.+.... ..+... ..... .+...+...+.++|.++ ..... . .+.+|+. +...+|++||+++++++++.+
T Consensus 361 ~~ie~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Gvl~-~~~~~-~-~~~l~~~-Ppl~it~~ei~~~~~~l~~~l 433 (442)
T TIGR00709 361 QGIMIVDERQSKDATGAYPRDC---ELAAAIQGACFENGLLL-ETGGR-E-GEVFRLL-CPITIDQEECEEGISRFKQAV 433 (442)
T ss_pred EEEEEccCcccccccccCCcch---HHHHHHHHHHHHCCeEE-eecCC-C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHH
Confidence 445443221 100000 00000 12346778888898543 33221 1 4689999 999999999999999998876
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 434 ~~ 435 (442)
T TIGR00709 434 EE 435 (442)
T ss_pred HH
Confidence 43
No 331
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=1.2e-14 Score=143.64 Aligned_cols=305 Identities=11% Similarity=0.063 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.|+++.+.. ..+.|+++||+|+..|++.||... +.+|.. +++. +|......|.....++...+.
T Consensus 82 ~~~~~la~~L~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~----~~~g~~--~~r~~ii~~~~~yHG~t~~~~s~~~~ 154 (408)
T PRK04612 82 APPLKLAEELVTASRFA-EKVFLCNSGTEANEAAIKLVRKWA----SSQGRP--ADKRVIVTFRGSFHGRTLAAVTATAQ 154 (408)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEEcCchHHHHHHHHHHHHHHH----HhhCCC--CCCcEEEEECCCcCCccHHHHHhcCC
Confidence 44456677777776432 469999999999999999999741 122321 1232 444455567766665554432
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
.. ..+..+|.+ |++.+++.+++ ..+++|+++..+...|.+.+ +++|.++|++||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~ll 224 (408)
T PRK04612 155 PKYQEGYEPLPGGFRYVDFN-----DVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALL 224 (408)
T ss_pred cccccCCCCCCCCceEcCCC-----CHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 10 122233332 78888888752 23677777766554444442 899999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
++|++|++.......+.. ...++ .+|+++ +.|.+++++++|+++.++ +......... .. .
T Consensus 225 I~DEv~tg~gr~G~~~a~-~~~~~-~pdi~t--~~K~l~~G~piga~~~~~-~~~~~~~~~~-----~~----------~ 284 (408)
T PRK04612 225 VLDEIQCGMGRTGTLFAH-WQEQV-TPDIVT--LAKALGGGFPIGAMLAGP-KVAETMQFGA-----HG----------T 284 (408)
T ss_pred EEeccccCCCcCCchhhh-hhcCC-CCCEEE--EcchhcCCCceEEEEECH-HHHhhhcCCC-----cC----------C
Confidence 999999875443322221 11222 456666 579998778899988654 3333221100 00 0
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEec--CCceeEEEEEeecCccCCCch
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLIL--EPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~--~~~~~~v~f~~~~~~~~~~~~ 414 (480)
+ + ++.+....++..+|+.+-. .++.++..++.++|.+.|++ +. .+.++. .....++.+.+.+...
T Consensus 285 t--~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~-l~~~~~~i~~vrg~Gl~~~i~~~~~~~----- 352 (408)
T PRK04612 285 T--F-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEA-LNAEFGVFAQVRGRGLMLGAVLAPAHA----- 352 (408)
T ss_pred C--C-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-HHhhCCCeeeeeccceEEEEEecCchh-----
Confidence 0 0 1222233344444444322 35667778888888887766 31 122222 2223333343321110
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.....+.+.+.+.|.++... + .+.+|++ ++...|++||+++++.+++.+++
T Consensus 353 --------~~a~~i~~~l~~~Gvlv~~~----g-~~~lRl~-Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 353 --------GQAGAILDLAAEHGLLLLQA----G-PDVLRFV-PALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred --------hHHHHHHHHHHHCCeEEeeC----C-CCEEEEc-CCccCCHHHHHHHHHHHHHHHHH
Confidence 01245677888899554332 3 4789999 99999999999999999887653
No 332
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=3e-14 Score=141.53 Aligned_cols=317 Identities=13% Similarity=0.104 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.++++++-+ ...+.|+++||+|+..|++.||.. +|. ..+|......|.....+....+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~~~~~ 149 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA-------TGR-----SAVIAFGGGFHGRTFMGMSLTG 149 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh-------hCC-----CeEEEECCCcCCccHHHhhhcC
Confidence 344556777788877532 146999999999999999999874 221 2244455566776554444333
Q ss_pred C--------C--CCCeEEeeCCCC-CCCC----HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 190 L--------G--TDNCVEVPSDKR-GRLI----PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 190 ~--------~--~~~v~~v~~~~~-~~~d----~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
. + ...+..+|.+.+ ..++ ++++++.++.. ..+..+++|+++......|.+.+ +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~ 228 (425)
T PRK07495 150 KVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELC 228 (425)
T ss_pred CCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 1 113455665432 1233 33445555421 12245889999988888785533 89999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|++++++......+.. ...++ .+|+++ +.|.+++++++|+++.+. ++..... ......
T Consensus 229 ~~~g~llI~DEv~tG~gr~G~~~a~-~~~gv-~pDi~t--lsK~l~~G~pigav~~~~-~i~~~~~---~~~~~~----- 295 (425)
T PRK07495 229 DQHGILLIADEVQTGFARTGKLFAM-EHHEV-AADLTT--MAKGLAGGFPLAAVTGRA-EIMDAPG---PGGLGG----- 295 (425)
T ss_pred HHcCCEEEEechhhcCCcCCCceee-cccCC-CCCEEe--ehhhhcCCccceEEEEcH-HHHhccC---CCCcCC-----
Confidence 9999999999999876443332222 22344 578776 569998878889988754 3333211 110000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~ 407 (480)
++ .+.+....+..++++.+..+ +..++..++.++|.+.|++. .|.+.-+... +.++.+.+.+.
T Consensus 296 ---------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~iel~~~ 361 (425)
T PRK07495 296 ---------TY-GGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP-GFMNAVEFNDA 361 (425)
T ss_pred ---------CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-ceEEEEEEecC
Confidence 00 11112222333445554333 34456666666666666541 3332211112 33344444322
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
... ... . .....+.+.+.++|.++... .. . .+.+|+. +....|+++|++++++|++.+++
T Consensus 362 ~~~-~~~----~---~~~~~~~~~~~~~Gvl~~~~-g~-~-~~~~r~~-Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 362 DSG-LPS----A---EFANRVRLKALEKGLILLTC-GV-H-GNVIRFL-APITIQDDVFAEALDILEASILE 421 (425)
T ss_pred CCC-Ccc----H---HHHHHHHHHHHHCCeEEeec-CC-C-CCEEEEe-CCCccCHHHHHHHHHHHHHHHHH
Confidence 110 000 0 11346778888899654322 11 1 3689999 99999999999999999988764
No 333
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=1.5e-14 Score=145.01 Aligned_cols=327 Identities=13% Similarity=0.057 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
++...++.+.+++++..+...+.|+++||+|+..|++.||... ..+|.++. ..+|......|.....+....+.
T Consensus 89 ~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~----~~~g~t~r--~~ii~~~~~yHG~t~ga~s~~~~ 162 (466)
T PRK07030 89 HEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYW----RNRGKPRK--KRFVTLTNSYHGETLAAMSVGDV 162 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HHhCCCCC--cEEEEECCCcCcccHHHHhccCC
Confidence 4555667788888775333579999999999999999998641 11222111 22455555667766565554432
Q ss_pred CC---------CCeEEeeCCCCCC----C--------CHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC----hH
Q psy12303 191 GT---------DNCVEVPSDKRGR----L--------IPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP----IE 244 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~----~--------d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~----l~ 244 (480)
.. ..+..+|.....+ . +++++++.++. .+..+++|+++. .+...|.+.| ++
T Consensus 163 ~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~ 239 (466)
T PRK07030 163 ALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLK 239 (466)
T ss_pred ccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHH
Confidence 10 1234444322111 1 24556666652 234588999988 5777787754 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCc--c
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSA--E 321 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~--~ 321 (480)
+|.++|++||+.+|+|+++.|+......+.. ...++ .+|++++ .|.+++++ +.|+++.+++ +.+....... .
T Consensus 240 ~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~-~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e-i~~~~~~~~~~~~ 314 (466)
T PRK07030 240 LLREACDRYGVHLIHDEIAVGFGRTGTMFAC-EQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT-VYQAFYDDYPTLR 314 (466)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCccccchHH-HhcCC-CCCEEee--ehhccCCcccceEEEecHH-HHHHHhccccccc
Confidence 9999999999999999999887655444443 34566 6999995 69998884 8898887543 3333211100 0
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVN 399 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~ 399 (480)
.+.+. +++ .+.+....++.++|+.+-. +++.++..++.++|.+.|++ +.....+.+ -.+.+
T Consensus 315 ~~~h~----------~T~---~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~-l~~~~~v~~vrG~Gl~ 377 (466)
T PRK07030 315 AFLHS----------HSY---TGNPLACAAALATLDIFEQ---DNVIENNRALARRMAEATAH-LADHPHVAEVRQTGMI 377 (466)
T ss_pred ccccC----------CCC---CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHH-HhcCCCEEEeEeceeE
Confidence 01010 000 1122233333344444332 34567778888888888766 422221221 22233
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.+.......... . .. . .....+.+++.++|.++... .+.+|+. ++..+|++||+++++.+++.+++
T Consensus 378 ~gie~~~~~~~~~~~-~-~~-~-~~~~~i~~~~~~~Gvl~~~~------g~~i~~~-Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 378 LAIEMVQDKASKTPY-P-WQ-E-RRGLKVYQHALERGALLRPL------GSVVYFL-PPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred EEEEeccCccccccC-c-ch-h-HHHHHHHHHHHHCCeEEEec------CCEEEEE-CCccCCHHHHHHHHHHHHHHHHH
Confidence 344333211100000 0 00 0 11246778888999554221 2589998 99999999999999999988764
No 334
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.72 E-value=9.8e-15 Score=145.17 Aligned_cols=314 Identities=13% Similarity=0.082 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.++++++.. ...+.|+++||+|+..|++.||.. .|. +.+|......|.....+....+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~s~~~ 149 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH-------TGR-----PGVIAFSGGFHGRTYMTMALTG 149 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh-------cCC-----CeEEEECCCcCCccHHHHhhcC
Confidence 344556777788876532 246899999999999999999864 221 2244455556776655555433
Q ss_pred C--------C--CCCeEEeeCCCCC-CC----CHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc-C---hHHHHHHH
Q psy12303 190 L--------G--TDNCVEVPSDKRG-RL----IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD-P---IEEIADIC 250 (480)
Q Consensus 190 ~--------~--~~~v~~v~~~~~~-~~----d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~-~---l~~I~~i~ 250 (480)
. + ...+..+|...+. .+ +++.+++.+++.. ....+++|+++..++++|... | +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK09792 150 KVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 2 1 0124445543211 12 2366776665310 123488999999999999764 5 89999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|++++++......+.. ...++ ..|+++ +.|.++++++.|+++.+. ++...... .....
T Consensus 229 ~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~-~pDi~t--~gK~l~~G~pigav~~~~-~i~~~~~~---~~~~~----- 295 (421)
T PRK09792 229 DEHGIVMIADEVQSGFARTGKLFAM-DHYAD-KPDLMT--MAKSLAGGMPLSGVVGNA-NIMDAPAP---GGLGG----- 295 (421)
T ss_pred HHcCCEEEEeccccCCCCCCchhHH-HhcCC-CCcEEE--eehhhcCCCceEEEEEcH-HHHhccCC---CCcCC-----
Confidence 9999999999999987553322222 12233 578655 679999888899988643 33332210 00000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCce-eE-EEEEee
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEM-VN-VSFWYL 405 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~-~~-v~f~~~ 405 (480)
++ .+.+....++.+.++.+..+ +..++..++.+++.+.|++. .|. +..+.. +. +.+.+.
T Consensus 296 ---------T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~---v~~vrG~Gl~~~ie~~ 359 (421)
T PRK09792 296 ---------TY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPA---IAAVRGLGSMIAAEFN 359 (421)
T ss_pred ---------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCC---cceecccceEEEEEec
Confidence 00 11112222333445544332 34556666666666666541 332 223333 33 333332
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.. ...... .....+.+.+.++|.++. .. ....+++|+. ++...+++||+++++.|.++++
T Consensus 360 ~~~-~~~~~~-------~~~~~l~~~~~~~Gv~i~-~~--g~~~~~irl~-P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 360 DPQ-TGEPSA-------AIAQKIQQRALAQGLLLL-TC--GAYGNVIRFL-YPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCc-cCCcch-------HHHHHHHHHHHHCCcEEe-ec--CCCCCEEEEe-CCCcCCHHHHHHHHHHHHHHHh
Confidence 211 000000 113567888899996653 21 1114799998 8888999999999999998765
No 335
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=1.6e-14 Score=144.84 Aligned_cols=326 Identities=13% Similarity=0.067 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g 189 (480)
++.+.++.+.+++++...-..+.|+++||+|+..|++.||... ...|. +|+. +|......|.....+..+.|
T Consensus 98 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~----~~~g~---tgr~~ii~~~~~YHG~t~~als~s~ 170 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYW----QNKGK---PKKQRFVTLKNAYHGDTIGAVSVGA 170 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCcCCcccHHhHhccC
Confidence 3455667788888875433479999999999999999998741 11122 2232 45555566776666655444
Q ss_pred CCC---------CCeEEeeCCCCC----C--------CCHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC----h
Q psy12303 190 LGT---------DNCVEVPSDKRG----R--------LIPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~~---------~~v~~v~~~~~~----~--------~d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~----l 243 (480)
... ..+..+|..... . -+++++++.++. .+..+++|+++. .+...|.+.| +
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl 247 (460)
T PRK06916 171 IDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYL 247 (460)
T ss_pred CcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHH
Confidence 210 123444432111 0 124556666652 234589999988 5777787743 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCC--c
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMS--A 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~--~ 320 (480)
+++.++|++||+++|+|+++.|+......+.. ...++ .+|+++ +.|.+++++ ++|+++.++. +........ .
T Consensus 248 ~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~-~~~gv-~PDiv~--~gK~l~gG~~Pi~av~~~~e-i~~~~~~~~~~~ 322 (460)
T PRK06916 248 KGLRNLCTKYNVLFITDEVATGFGRTGKMFAC-EHENV-TPDIMT--AGKGLTGGYLPIAITVTTDE-IYNAFYGDYEEQ 322 (460)
T ss_pred HHHHHHHHHcCCEEEeechhhCCCcCchhhHH-HhcCC-CCCeee--eehhhhcCccccceeeecHH-HHHHhhcccccc
Confidence 99999999999999999999886554444333 34456 689988 569888774 8899887643 333221000 0
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--Ccee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~ 398 (480)
..+.+ .+++ .+.+....++.++|..+.. +.+.++..++.++|.+.|++ +.....+.+ -.+.
T Consensus 323 ~~~~~----------~~T~---~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~l~~-l~~~~~v~~vrG~Gl 385 (460)
T PRK06916 323 KTFFH----------GHSY---TGNPLGCAVALANLELYEK---TNLIEQVARKTEYVATQLED-LFALKHVGDIRQLGL 385 (460)
T ss_pred Ccccc----------CCCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-hhcCCCeEEeecCCc
Confidence 00000 0001 1222223333344444332 24567788888888888876 432222221 1222
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++.+.+........ ..... . .....+...+.++|.++... .+.+|+. ++..+|++||+++++++++.++
T Consensus 386 m~giel~~~~~~~~-~~~~~--~-~~~~~i~~~~~~~Gvl~~~~------g~~l~~~-Ppl~it~~~id~~~~~l~~~l~ 454 (460)
T PRK06916 386 MVGIELVKNKETKE-PFEWT--E-RVGVQVCKRSRELGMLTRPL------GNTIVFM-PPLASTIDELDEMLRILYKAIS 454 (460)
T ss_pred eeeEEeeccccccc-CCCch--h-hHHHHHHHHHHHCCeEEEec------CCEEEEe-CCcccCHHHHHHHHHHHHHHHH
Confidence 33333322111000 00000 0 01246778888999554321 2589998 9999999999999999998876
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 455 ~ 455 (460)
T PRK06916 455 D 455 (460)
T ss_pred h
Confidence 4
No 336
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=1.5e-14 Score=144.86 Aligned_cols=321 Identities=12% Similarity=0.070 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHhCCCC---CCeEEC-CChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 112 LMETVVLEKMRQIIGWQG---GDSILA-PGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~---~~~~~t-~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
..+.++.+.+.+++.-+- ..++|+ ++||+|+..|++.||.. .|. +.+|......|.....++..
T Consensus 106 ~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~als~ 173 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTA-------TGR-----STVLSFQGGYHGMSQGALSL 173 (464)
T ss_pred HHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHh-------hCC-----CeEEEECCccCCccHHHHhh
Confidence 444456666776654211 245565 79999999999999864 221 22455555667766666654
Q ss_pred cCCC---------CCCeEEeeCCCCCC------------CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----
Q psy12303 188 CGLG---------TDNCVEVPSDKRGR------------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 188 ~g~~---------~~~v~~v~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
.+.. ...+..+|.....+ .+++.+++.+++.......+++|++...+...|.+.|
T Consensus 174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 253 (464)
T PRK06938 174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW 253 (464)
T ss_pred cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence 4311 11344555432211 1356777777543222235899999998888888754
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++++.++|++||+.+|+|+++.|+......+.. ...++ .+|++++ .|.+++++++|+++.++. +... .+..
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~-e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~--~~~~---~~~~ 324 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAF-EHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW--LDTW---QPGA 324 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHH-HhcCC-CCCEEEe--eccccCCCceEEEeehhH--hhcc---CCCC
Confidence 899999999999999999999988655544443 34566 6899995 699988889999997643 2211 1111
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecC--CceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILE--PEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~--~~~~~ 399 (480)
..+ ++ .+.+....++.++|+.+..+ +..++..++.++|.+.|++ + ....++.+ -.+.+
T Consensus 325 ~~~------------T~---~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~-l~~~~~~i~~VrG~Glm 385 (464)
T PRK06938 325 HAG------------TF---RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQ-LQRDYPQLGDVRGRGLM 385 (464)
T ss_pred CCC------------CC---CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH-HHHhCCCeeeeeccceE
Confidence 000 00 12222333344444444333 3456667777777777665 3 11222222 22333
Q ss_pred EEEEeecCc-cCCCc-hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTR-VRNMP-HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~-~~~~~-~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.+.... ..+.. ...... .....+.+.+.++|.++ .+... . .+.+|+. ++..+|++||+++++++++.+
T Consensus 386 ~gie~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Gll~-~~~g~-~-~~~l~~~-Ppl~it~~eid~~~~~l~~~l 458 (464)
T PRK06938 386 LGVEIVDPQGEPDALGHPPANG---ELASLIQRECLRRGLIL-ELGGR-H-GSVVRFL-PPLIITAEQIDEVAEIFAEAV 458 (464)
T ss_pred EEEEeccCcccccccccCCccH---HHHHHHHHHHHHCCeEE-eecCC-C-CCEEEEE-CCCccCHHHHHHHHHHHHHHH
Confidence 444443211 00000 000000 12346778888899554 32211 1 3689998 999999999999999999877
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 459 ~~ 460 (464)
T PRK06938 459 AA 460 (464)
T ss_pred HH
Confidence 54
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.72 E-value=3e-15 Score=155.96 Aligned_cols=367 Identities=13% Similarity=0.053 Sum_probs=227.5
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhH-HHHHHH--HcCc-CCcchhcChh
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMA-GEWLIA--TANT-NMFTYEIAPV 109 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~l~~--~~~~-~~~~~~~~~~ 109 (480)
-|.+++...+.++| ++.+..++++.++++...+.. ...|++...-+...|+++ ..++.. ++.. .++..+.+.+
T Consensus 45 iP~~ir~~~~l~lp-~~~sE~e~~~~~~~~a~kN~~--~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG 121 (954)
T PRK12566 45 VPPAIRLNRPLDLP-AALDEQAALARLRGYAEQNQV--WTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQG 121 (954)
T ss_pred CCHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC--ccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhH
Confidence 35666644456777 478999999999998766644 234554433333333444 444432 1111 2344456777
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.-+.-.+...+++++.|.+-.+..+..++|.+-..++++.+.. ++ . +.+|++++..|+.....++...
T Consensus 122 ~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~-------~~----k-~~~~~v~~~~hP~~~~v~~t~~ 189 (954)
T PRK12566 122 RLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVA-------KS----K-SNRFFVDEHCHPQTLSVLRTRA 189 (954)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHh-------hc----C-CCEEEECCCCCHHHHHHHHHhh
Confidence 6676677889999999999888899999997666333333321 00 0 2279999999999877665542
Q ss_pred --CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc-
Q psy12303 190 --LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG- 266 (480)
Q Consensus 190 --~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~- 266 (480)
.|. +++. +++++.+.++ +++|++++| |..|.+.++++|.++++++|..+++ ++.-..
T Consensus 190 ~~~g~-~i~~-----------~~~~~~~~~~------~~~v~vq~P-~~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL 249 (954)
T PRK12566 190 EGFGF-ELVV-----------DAVDNLAAHA------VFGALLQYP-DTHGEIRDLRPLIDQLHGQQALACV-AADLLSL 249 (954)
T ss_pred hcCCc-EEEE-----------cchhhcCCCC------EEEEEEECC-CCceEEccHHHHHHHHHHcCCEEEE-EeCHHHH
Confidence 221 4332 2344444333 899999999 5789999999999999999998654 433221
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCc-----ccceEEEEeCchhhHhhhcCCcccccccccccCcc--------
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-----LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR-------- 333 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 333 (480)
.+.-+...+ ++|+++.+.+.+ |.| +..|++.+++. +.+ ..|+.+.+......+.
T Consensus 250 ~ll~~Pge~-------GADI~vG~~Q~f-Gvp~~~GGP~ag~~a~~~~-~~R----~~PGRivG~s~D~~G~~a~~l~Lq 316 (954)
T PRK12566 250 LVLTPPGEL-------GADVVLGSTQRF-GVPMGYGGPHAAYFACRDD-YKR----AMPGRIIGVSRDARGNTALRMALQ 316 (954)
T ss_pred hCCCChhhc-------CCcEEeeCCCcC-CCCCCCCCCCeeeeeehHH-HHh----hCCCCccceeecCCCCeeeehhhh
Confidence 122222344 999997766543 334 33677776653 222 2344443322211111
Q ss_pred -------cCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 334 -------YDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 334 -------~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
.+-.+.++ |+.. ..++.+.+.+..+|.+|++++.++.+.++.+|.+.|.+ .|+++..++-+..+.+.+
T Consensus 317 tREQHIRReKAtSNI-CT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~--~g~~~~~~~fF~~~~v~~- 392 (954)
T PRK12566 317 TREQHIRREKANSNI-CTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA--KGIKRLNRHFFDTLTLEV- 392 (954)
T ss_pred HHHHHhhhccccchh-hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh--cCCccccCCccceEEEEc-
Confidence 11111111 1100 12222333345569999999999999999999999999 899987776666666654
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
... ..++.++..+.|.-+... + .+.+.+| ....+|.+|++.++.++.
T Consensus 393 ~~~----------------~~~~~~~a~~~~~n~r~~----~-~~~~~~s-~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 393 GGA----------------QAAIIESAEAARINLRIL----G-RGRLGVS-LDETCDEATVARLFDIFL 439 (954)
T ss_pred cCC----------------HHHHHHHHHHCCCeeEEe----C-CCeEEEE-eCCCCCHHHHHHHHHHhc
Confidence 101 235666666777433332 1 3578899 889999999999999884
No 338
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.72 E-value=1.1e-14 Score=144.31 Aligned_cols=313 Identities=11% Similarity=0.010 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
+...++.+.++++++.+-+.+.|+++||+|+..|++.+|... ..+|. .....|......|.....+....+-.
T Consensus 86 ~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~----~~~g~---~r~kii~~~~~yHG~t~~a~s~~~~~ 158 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYW----QAKGE---PRQRFLTLRHGYHGDTFGAMSVCDPD 158 (428)
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCcEEEEECCCcCCCcHhhhcccCCc
Confidence 445567788888875433579999999999999999998741 11121 11225555656676655544443310
Q ss_pred ----------CCCeEEeeCCCC-C-----CCCHHHHHHHHHHHHHCCCccEEEEeccC-CCcccccc----ChHHHHHHH
Q psy12303 192 ----------TDNCVEVPSDKR-G-----RLIPSELERLVLERKAKGDIPFFVNCTSG-TTVLGAFD----PIEEIADIC 250 (480)
Q Consensus 192 ----------~~~v~~v~~~~~-~-----~~d~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~----~l~~I~~i~ 250 (480)
...+..+|.... . .-|++++++.++. .+..+.+|++... +...|.+. .+++|.++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc 235 (428)
T PRK07986 159 NSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLC 235 (428)
T ss_pred hhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHH
Confidence 012233432211 0 1255677777753 2334778888774 55556542 289999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
++||+++++|+++.|+......+.. ...++ .+|+++ +.|.++++ .++|+++.++ ++.+.........+.+.
T Consensus 236 ~~~g~lLI~DEv~tG~GrtG~~fa~-~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~~--- 307 (428)
T PRK07986 236 DREGILLIADEIATGFGRTGKLFAC-EHAGI-APDILC--LGKALTGGTMTLSATLTTR-EVAETISNGEAGCFMHG--- 307 (428)
T ss_pred HHcCCEEEEeccccCCccCCCeeee-cccCC-CCCEEE--echhhhCCcccCcchhchH-HHHHHhhcCCCCccccC---
Confidence 9999999999999775443333333 33455 579887 67998877 4778877654 34333221100001010
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecC
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPT 407 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~ 407 (480)
.++ .+.+....++.++|+.+-.+ +..++..++.++|.+.|++ +.....+.+ -.+.+..+.+..+
T Consensus 308 -------~T~---~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~-l~~~~~i~~vRg~Gl~~~ve~~~~ 373 (428)
T PRK07986 308 -------PTF---MGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAP-LRDAPMVADVRVLGAIGVVETTRP 373 (428)
T ss_pred -------CCC---CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH-HhcCCCEEeEeccceEEEEEeCCc
Confidence 011 12222333444445544322 3567788888888888876 422222221 1122222222111
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. ....+.+.+.++|.++... .+.+|++ +....|++||+++++.|.+.++
T Consensus 374 ~---------------~~~~~~~~l~~~Gl~~~~~------g~~i~~~-Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 374 V---------------NMAALQRFFVEQGVWIRPF------GKLIYLM-PPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred c---------------cHHHHHHHHHHCCcEEEec------CCEEEEe-CCCCCCHHHHHHHHHHHHHHHh
Confidence 0 0235678888899554321 2589999 9999999999999999998765
No 339
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=2.6e-14 Score=143.13 Aligned_cols=325 Identities=13% Similarity=0.041 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHhCC-----CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHH
Q psy12303 112 LMETVVLEKMRQIIGW-----QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~-----~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~ 185 (480)
+...++.+.+++++.. +-..+.|+++||+|+..|++.||... ...|. ++ ..+|......|.....+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~----~~~g~---~~r~~ii~~~~syHG~t~gal 179 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYF----HNRGE---HRRTRFIALENGYHGETIGAL 179 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCCchhhh
Confidence 4455677788887743 12469999999999999999999752 11222 22 224555556676665555
Q ss_pred HHcCCCC---------CCeEEeeCCCCCC----C--------CHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC-
Q psy12303 186 AVCGLGT---------DNCVEVPSDKRGR----L--------IPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP- 242 (480)
Q Consensus 186 ~~~g~~~---------~~v~~v~~~~~~~----~--------d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~- 242 (480)
...+... ..+..+|.....+ . +++.+++.++. .+..+.+|+++. .+...|.+.|
T Consensus 180 s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 180 AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCC
Confidence 5443210 1234444422111 1 24556666642 234588999988 4677787644
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcC
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~ 318 (480)
++++.++|++||+.+|+|+++.|+......+.. ...|+ .+|++++ .|.+++++ +.|+++++++ +.+.....
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~-e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e-i~~~~~~~ 331 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFAC-EQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ-LYDAFLDD 331 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHH-HhcCC-CCCEEEE--cccccCCCCCcceeeccHH-HHHHhhcc
Confidence 899999999999999999999987665544444 44566 6999995 69998774 7888887543 33322110
Q ss_pred C-cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--C
Q psy12303 319 S-AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--P 395 (480)
Q Consensus 319 ~-~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~ 395 (480)
. ...+.+. .++ .+.+....+..++|..+-.+. ++++..++.++|.+.++. .....++.+ -
T Consensus 332 ~~~~~~~h~----------~T~---~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~-~~~~~~i~dvRG 394 (472)
T PRK08742 332 SRERAFLHS----------HSY---TGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQ-IGEHPHVADVRQ 394 (472)
T ss_pred CccCccCcC----------CCC---CccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHH-HhcCCCeeeEec
Confidence 0 0000000 000 122223333334444443333 445555666666655444 222222222 2
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.+.++.+.+........... ... .....+.+.+.++|.++... .+.+|+. +....|++||+++++.|++
T Consensus 395 ~Gl~~giel~~~~~~~~~~~-~~~---~~~~~~~~~~~~~Gll~~~~------g~vi~~~-PpL~it~~ei~~~~~~l~~ 463 (472)
T PRK08742 395 AGMVVAFELTRGGNKRTPFP-PAA---RVGLHAYRAALARGVVLRPL------GDVLYWM-PPYCVDEAQLALLADTTRH 463 (472)
T ss_pred cceEEEEEeccCccccccCC-chh---HHHHHHHHHHHHCCeEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHH
Confidence 23333444432110000000 000 01245677888899554321 2689999 9999999999999999998
Q ss_pred hhcc
Q psy12303 476 LGHD 479 (480)
Q Consensus 476 ~~~~ 479 (480)
.+++
T Consensus 464 ~l~~ 467 (472)
T PRK08742 464 AIDE 467 (472)
T ss_pred HHHH
Confidence 8764
No 340
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.71 E-value=8.5e-15 Score=146.57 Aligned_cols=314 Identities=15% Similarity=0.111 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
...++++.+++.++.. ..++|++|||+|+..|++.+|.. .|. +.+|......|..........+.+.
T Consensus 89 ~~~~lae~l~~~~~~~-~~v~~~~sGseA~e~Alk~ar~~-------~gr-----~~ii~~~~~yhG~~~~~~~~~~~~~ 155 (423)
T TIGR00713 89 AEILLAKEIISRVPSV-EMVRFVNSGTEATMSAVRLARGY-------TGR-----DKIIKFEGCYHGHHDALLVKAGSGA 155 (423)
T ss_pred HHHHHHHHHHHhCCcc-cEEEEeCCHHHHHHHHHHHHHHh-------hCC-----CEEEEEcCCCCCChhhhhccccCcc
Confidence 3455677777776543 47999999999999999999874 121 3244444445554333332211110
Q ss_pred C----------------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHH
Q psy12303 193 D----------------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQK 252 (480)
Q Consensus 193 ~----------------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~ 252 (480)
. .+..+|. -|+++|++++++. +.++++|+++...+++|.+.| +++|.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 227 (423)
T TIGR00713 156 ATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEE 227 (423)
T ss_pred cccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 0 1122222 2789999988742 234788888755555898866 7999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
||+++++|++|.++.. ...... ...++ ..|+++ +.|.++++++.|+++.++ ++..........+...
T Consensus 228 ~~~llI~DEv~~g~r~-g~~~~~-~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~-~i~~~~~~~~~~~~~~------- 294 (423)
T TIGR00713 228 YGSLLIFDEVMTGFRV-ALGGAQ-EYFGV-EPDLTT--LGKIIGGGLPVGAFGGRR-EIMERLAPEGPVYQAG------- 294 (423)
T ss_pred hCCEEEEEcccccccc-CcchhH-HHhCC-Ccchhh--hhhhhcCCCceeeeeEHH-HHHHhhCcCCCeeecc-------
Confidence 9999999999987632 222112 22334 468665 789999777789888653 4443332110001100
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCC
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~ 411 (480)
++ ++.+....++.++|+.+..+ .++...+....+.+.|.+.+.+ . ++..-......++.+.+......+
T Consensus 295 -----T~---~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~v~~~g~~~~v~~~~~~~~~ 364 (423)
T TIGR00713 295 -----TL---SGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED-T-GIPHTVNRVGSMFSLFFTEEEVTN 364 (423)
T ss_pred -----CC---CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh-c-CCCeEEEeeccEEEEEEecCCCCC
Confidence 00 11112233333444443222 2333344444455555555566 3 433211223344444333221111
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
.......+ ......+.+.|.++|.+ +... + .+.+|++ + .+|+++|++++++|+++++++
T Consensus 365 ~~~~~~~~--~~~~~~~~~~l~~~Gv~-v~~~---~-~~~~~l~-~--~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 365 YADAKKSD--TELFAKFFHEMLDKGVF-LPPS---Q-FEACFLS-A--AHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred hhhhhccc--HHHHHHHHHHHHHCCeE-EecC---C-ccceeeE-C--CCCHHHHHHHHHHHHHHHhhC
Confidence 00000000 00123567788888844 4432 1 2457877 3 369999999999999988764
No 341
>PRK06917 hypothetical protein; Provisional
Probab=99.71 E-value=4.7e-14 Score=140.93 Aligned_cols=332 Identities=13% Similarity=0.110 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE-ecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF-TSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl-~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.+++++......+.|+++||+|+..|++.||... ..+|. +|+.+|+ .....|.....+....+
T Consensus 73 ~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~----~~rg~---t~r~~ii~~~~~yHG~t~~als~~~ 145 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHF----QERGI---QGKHKILSRWMSYHGITMGALSMSG 145 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEECCCcCCccHHHHHhcC
Confidence 4556678888888875443568999999999999999998641 11232 2233444 44556766666655444
Q ss_pred CCC---------CCeEEeeCCCCCCC------------CHHHHHHHHHHHHHCCCccEEEEeccCCCccc-cccC----h
Q psy12303 190 LGT---------DNCVEVPSDKRGRL------------IPSELERLVLERKAKGDIPFFVNCTSGTTVLG-AFDP----I 243 (480)
Q Consensus 190 ~~~---------~~v~~v~~~~~~~~------------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G-~~~~----l 243 (480)
... ..+..+|.....+. +++.+++.++.. .+..+++|+++......| .+.| +
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl 223 (447)
T PRK06917 146 HPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYY 223 (447)
T ss_pred CccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHH
Confidence 210 01222332111110 234566666532 113489999998776544 5543 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++|.++|++||+++++|+++.++......+.. ...++ .+|+++ +.|.+++++ +.|+++.++ ++....... ...
T Consensus 224 ~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~-~~~gv-~PDi~~--~gK~l~~G~~Pi~a~~~~~-~i~~~~~~~-~~~ 297 (447)
T PRK06917 224 KVIKEICDHYDILFIADEVMTGLGRTGAMFAM-EHWGV-EPDIMT--LGKGLGAGYTPIAATVVSD-RVMEPILRG-SRS 297 (447)
T ss_pred HHHHHHHHHcCCEEEEechhhCcCcccchhhH-HhcCC-CCCEEE--eeehhccCCcceEEEEEcH-HHHHHHhcc-Ccc
Confidence 99999999999999999999876554443333 33455 689887 469998875 788888754 444332211 111
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC--CceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE--PEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~--~~~~~ 399 (480)
+.+. +++ .+.+....++.++|+.+..+ ++.++..++.++|.+.|++ +. ...++.. -...+
T Consensus 298 ~~~~----------~T~---~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~-l~~~~~~i~~vrG~Gl~ 360 (447)
T PRK06917 298 IMSG----------HTL---SANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQK-VQQQSTIIGDVRGKGLL 360 (447)
T ss_pred cccc----------cCC---CCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHH-HHhcCCCEEEEeecceE
Confidence 1110 000 11222333344444444322 3556777777777777765 31 1222222 22333
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-CC-cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-ND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.+.......... .... +....+.+.+.++|.++...... .+ ..+.+|++ +...+|++||+++++++++.+
T Consensus 361 ~~ie~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~-Ppl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 361 IGVEFVADKKTKQPF-SKSQ---AVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIA-PPMTITYSELDELLSIFAKSV 435 (447)
T ss_pred EEEEEeccCCcCCCC-cchh---HHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEE-CCCcCCHHHHHHHHHHHHHHH
Confidence 444443221100000 0000 12356778899999654322110 01 14689999 889999999999999999877
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 436 ~~ 437 (447)
T PRK06917 436 EE 437 (447)
T ss_pred HH
Confidence 54
No 342
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.71 E-value=3.1e-17 Score=153.12 Aligned_cols=251 Identities=19% Similarity=0.226 Sum_probs=159.8
Q ss_pred CcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 98 NTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 98 ~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
+.....|..++...++|+. +++++|.+. .+|+++||.||..++++... |++ .|++...+
T Consensus 19 ~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~--a~f~~sGT~An~~al~~~~~--------------~~~-~vi~~~~a 77 (290)
T PF01212_consen 19 NVGDDAYGEDPTTARLEER----IAELFGKEA--ALFVPSGTMANQLALRAHLR--------------PGE-SVICADTA 77 (290)
T ss_dssp TSB-CCTTSSHHHHHHHHH----HHHHHTSSE--EEEESSHHHHHHHHHHHHHH--------------TTE-EEEEETTE
T ss_pred ccCCcccCCChhHHHHHHH----HHHHcCCCE--EEEeCCCChHHHHHHHHHHh--------------cCC-ceeccccc
Confidence 3333457777776666655 888999986 68999999999999999984 434 78888889
Q ss_pred chhHHHHH---HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc-cccc---ChHHHHHHH
Q psy12303 178 HYSVRSCA---AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL-GAFD---PIEEIADIC 250 (480)
Q Consensus 178 h~s~~~~~---~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~---~l~~I~~i~ 250 (480)
|..+...- ...|. +++.++.+++|.+|+++|++.+++...+..+|++|+++++++.. |.+. .|++|.++|
T Consensus 78 Hi~~~E~ga~~~~~G~---~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 78 HIHFDETGAIEELSGA---KLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp HHHHSSTTHHHHHTTC---EEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred eeeeeccchhhHhcCc---EEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 98765432 34566 78888877669999999999998864444568999999997654 6664 478888899
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++|+|||--.-........ .-.-...+|+++++++|.++.|. |.+++.+++.+....... .++.+.-
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~~--~~e~~~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~-k~~gg~~--- 226 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGVS--LAEIAAGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQR-KRLGGGM--- 226 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHHH--HHHHHTTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHH-HHHTHHH---
T ss_pred HhCceEEEEehhhHHHhhhccccc--HHHHhhhCCEEEEEEEccccccc--ceEEEechHHHHHHHHHH-HHhccCe---
Confidence 999999999998543322110000 00111389999999999999753 455555666544322110 1111100
Q ss_pred CcccCCCCccccCCCCCCchHH---H--HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKL---W--LQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~---~--~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
.+ ...+.+ + ..+.. .+.......+..++++.|.+.|+. . ++.+..++..+
T Consensus 227 ----------~~----~G~~~a~~~~~~~~l~~--l~~~~~~~~~~~~~A~~La~~l~~-~-~~~~~~~~~tn 281 (290)
T PF01212_consen 227 ----------RQ----AGVLAAAELYQFAALRA--LELWLERARHANAMAKRLAAGLEA-L-GGVLPRPVETN 281 (290)
T ss_dssp ----------HH----TTHHHHHHHHHHHHHCH--EECSHHHHHCHHHHHHCHHHCHHE-E-CEEEETTSS-H
T ss_pred ----------ee----cceeeeechhhHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCCCc
Confidence 00 011111 1 11211 122256678889999999999999 4 55555444433
No 343
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.71 E-value=2.1e-14 Score=143.14 Aligned_cols=313 Identities=15% Similarity=0.132 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+..+.++.+.++++++. ...+.|+++||+|+..|++.+|.. .|. +.+|......|.....++...|.
T Consensus 92 ~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~~~~~~ 158 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-LEKVRFVNSGTEAVMTTIRVARAY-------TGR-----TKIIKFAGCYHGHSDLVLVAAGS 158 (428)
T ss_pred CHHHHHHHHHHHHhCCC-CcEEEEeCCHHHHHHHHHHHHHHh-------hCC-----CEEEEECCCcCCChHHHHHhcCC
Confidence 34456677778877652 246999999999999999999875 221 22455555667766555554332
Q ss_pred CC----------------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 191 GT----------------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 191 ~~----------------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
.. ..+..+|.+ |++++++.+++. +..+.+|+++......|.+.| +++|.++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc 230 (428)
T PRK12389 159 GPSTLGTPDSAGVPKSIAQEVITVPFN-----DIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELA 230 (428)
T ss_pred cccccCCCCCCCCCCcccCceEEcCCC-----CHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 10 122333332 788999888643 234889999999999999888 99999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+.+++|++++++ ........ ...++ .+|+++ +.|.++++++.|+++.+ +++.+........+..+
T Consensus 231 ~~~g~llI~DEV~tG~-Rt~~~~a~-~~~gv-~PDivt--~gK~lggG~Pi~av~~~-~~i~~~~~~~~~~~~~~----- 299 (428)
T PRK12389 231 HEAGALVIYDEVITAF-RFMYGGAQ-DLLGV-EPDLTA--LGKIIGGGLPIGAYGGR-KDIMEQVAPLGPAYQAG----- 299 (428)
T ss_pred HHcCCEEEEEcccccc-ccCcchhh-HHhCC-CCCeee--echhhcCCCceeEEeEH-HHHHhhhccCCCccccc-----
Confidence 9999999999999987 32221112 23355 689877 56999888888998754 44443321101111100
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCC-eEEecCCceeEEEEEeec
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDK-FYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g-~~~~~~~~~~~v~f~~~~ 406 (480)
++ .+.+....++.++|+.+..+ +..++..++.++|.+.|++. .+- ..+.. . .+++.+.+..
T Consensus 300 -------T~---~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r-~-~g~~gi~~~~ 364 (428)
T PRK12389 300 -------TM---AGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINR-L-KGALTVYFTD 364 (428)
T ss_pred -------CC---ccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEe-c-CcEEEEEEeC
Confidence 00 11112333344445544322 35667777788877777641 221 22211 1 1233333332
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
............+ ......+.+.+.++|.++ .+. + .+.+. ++..+|++||+++++++++.++++
T Consensus 365 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~~-~~~---~-~~~~~---~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 365 EKVTNYDQAERSD--GEAFGKFFKLMLNQGINL-APS---K-YEAWF---LTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CCCCChhhhcccC--HHHHHHHHHHHHHCCcEe-ecC---C-CCCee---ecCCCCHHHHHHHHHHHHHHHHhC
Confidence 1111000000000 011246778888898544 321 1 12222 557889999999999999987653
No 344
>PRK06148 hypothetical protein; Provisional
Probab=99.70 E-value=6.5e-14 Score=152.52 Aligned_cols=320 Identities=16% Similarity=0.115 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.+.+.++.+.+++++..+-..+.|++||||||..|++.||.. +|. +.+|......|.....+....+.
T Consensus 662 ~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~-------tGr-----~~ii~~~~~YHG~t~~a~s~s~~ 729 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH-------TGQ-----RDAIVLDHAYHGTTTELIDLSPY 729 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh-------cCC-----CeEEEEcCCccCCCcchhhcCch
Confidence 445566778888887543356899999999999999999874 232 22455555667665544443221
Q ss_pred --------C-CCCeEEeeCCCC----CC-CC-------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHH
Q psy12303 191 --------G-TDNCVEVPSDKR----GR-LI-------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEE 245 (480)
Q Consensus 191 --------~-~~~v~~v~~~~~----~~-~d-------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~ 245 (480)
+ ...+..++.... +. -+ .+.+++.++.....+..+++|++.......|.+.| +++
T Consensus 730 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~ 809 (1013)
T PRK06148 730 KFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLRE 809 (1013)
T ss_pred hhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHH
Confidence 1 112333322111 11 11 24566666543333456899999999888888876 999
Q ss_pred HHHHHHHcCcEEEeeccccccccccc-cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSK-KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
|.++|++||+.+|+|+++.|+..... .+.. ...|+ .+|++++ .|.++++++.|+++.+ +++...... . .+..
T Consensus 810 lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~-e~~gv-~PDivt~--gK~lggG~Plgav~~~-~ei~~~~~~-g-~~~~ 882 (1013)
T PRK06148 810 VYAMVRAAGGVCIADEVQVGFGRVGSHWWAF-ETQGV-VPDIVTM--GKPIGNGHPMGAVVTT-REIADSFDN-G-MEYF 882 (1013)
T ss_pred HHHHHHHhCCEEEEEecccCCCCCCCcchhh-hhcCC-Ccceeee--cccccCCcceEEEEEc-HHHHhhccC-C-Cccc
Confidence 99999999999999999987755443 3333 34466 6899885 6999988999999976 344332211 0 0000
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEecC--CceeEEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP-DKFYLILE--PEMVNVS 401 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~-~g~~~~~~--~~~~~v~ 401 (480)
+ ++ .+.+....+..++|+.+..+ ++.++..++.++|.+.|++ + ....++.. -.+.++.
T Consensus 883 ~------------Tf---~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~-l~~~~~~i~~VrG~Gl~~g 943 (1013)
T PRK06148 883 N------------TF---GGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRE-LQDRFDIIGDVRGMGLFLG 943 (1013)
T ss_pred c------------CC---CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHH-HHHhCCCceEEeeeceEEE
Confidence 0 00 12222333344444444333 3556677777777777765 3 11112211 1222333
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.......... ......+.+.+.++|+++. +.... .+++|+. ++..+|++|||+++++|++.+++
T Consensus 944 vel~~~~~~~~~~-------~~~~~~i~~~~~~~Gvl~~-~~g~~--~~vlr~~-Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 944 IELVTDRKTKAPA-------TAIARYVKNGARERGILIG-TEGPH--DNVLKIR-PPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred EEecCCccccCcc-------HHHHHHHHHHHHhCCeEEe-ccCCC--CCEEEEe-CCccCCHHHHHHHHHHHHHHHHH
Confidence 4333211000000 0123567788889995543 22111 4799999 99999999999999999988764
No 345
>PRK07483 hypothetical protein; Provisional
Probab=99.70 E-value=7.4e-14 Score=139.35 Aligned_cols=331 Identities=15% Similarity=0.119 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.+++++......+.|+++||+|+..|++.||... ..+|. +++.+|+. ....|.....+....|.
T Consensus 73 ~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~----~~~g~---~~r~~Ii~~~~~YHG~t~~a~s~s~~ 145 (443)
T PRK07483 73 EPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYF----VEIGQ---PQRRHFIARRQSYHGNTLGALAIGGN 145 (443)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCcCHHHhhhcCC
Confidence 445567778888764323469999999999999999998742 11232 22334444 55667766555554331
Q ss_pred C---------CCCeEEeeCCCCCCC-----C--------HHHHHHHHHHHHHCCCccEEEEeccCCC-ccccccC----h
Q psy12303 191 G---------TDNCVEVPSDKRGRL-----I--------PSELERLVLERKAKGDIPFFVNCTSGTT-VLGAFDP----I 243 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~~-----d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~~----l 243 (480)
. ...+..+|....++- + ++++++++... ....+++|++...+. ..|.+.| +
T Consensus 146 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl 223 (443)
T PRK07483 146 AWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYF 223 (443)
T ss_pred cccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHH
Confidence 1 112333433211111 1 24555555421 223488999988875 3476654 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++|.++|++||+++|+|+++.|+......+.+ ...++ .+|++++ .|.+++++ +.|+++++++ +.+.... ....
T Consensus 224 ~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~-i~~~~~~-~~~~ 297 (443)
T PRK07483 224 KRIREVCDRYGVLLILDEVMCGMGRTGTLFAC-EEDGV-APDLVTI--AKGLGAGYQPIGAVLASDR-IYDAIAD-GSGF 297 (443)
T ss_pred HHHHHHHHHhCCEEEEecceeCcccCcHHHHH-hhcCC-CCCeeee--hhhhccCccccEEEEEcHH-HHHHHhc-CCCc
Confidence 99999999999999999999987665544443 34456 6899995 69998875 8899887654 3332211 1111
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~ 399 (480)
+.+. .++ .+.+....++.++|+.+-. ....++..++.++|.+.|++. .+.+.-+ .-...+
T Consensus 298 ~~h~----------~T~---~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-RG~Glm 360 (443)
T PRK07483 298 FQHG----------HTY---LGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQHPHVGDI-RGRGLF 360 (443)
T ss_pred cccC----------CCC---CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE-eecccE
Confidence 1110 000 1111223333334444332 345566777777777777541 2322111 122233
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee-eCC-cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP-LND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~-~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.+.......... +... .....+.+.+.++|.++..... ..+ ..+.+|+. +....|++|||+++++|++.+
T Consensus 361 ~gie~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~-PpL~it~~eid~~~~~l~~~l 435 (443)
T PRK07483 361 VGVELVADRATKAPF-DPAL---KLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLA-PPFIITAAQIDEIVERLGDAI 435 (443)
T ss_pred EEEEEeecccccCCC-Cchh---hHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHH
Confidence 334332211000000 0000 1134677888999966543211 001 13689999 999999999999999999877
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 436 ~~ 437 (443)
T PRK07483 436 DA 437 (443)
T ss_pred HH
Confidence 54
No 346
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.70 E-value=1.5e-14 Score=140.19 Aligned_cols=282 Identities=11% Similarity=0.062 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL- 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~- 190 (480)
+...++.+.+++++|.+ .++|+++||+|+..|+++++.. +|. +.+|..+...|.....+....+.
T Consensus 66 ~~~~~la~~l~~~~~~~--~v~~~~SGseA~e~Alklar~~-------~gr-----~~Ii~~~~syHG~t~~~ls~~~~~ 131 (364)
T PRK04013 66 EEKEEMLEELSKWVNYE--YVYMGNSGTEAVEAALKFARLY-------TGR-----KEIIAMTNAFHGRTMGALSATWKP 131 (364)
T ss_pred HHHHHHHHHHHhhcCCC--EEEEeCchHHHHHHHHHHHHHH-------hCC-----CEEEEECCccccCchhhccCCCCc
Confidence 33445666677777664 5999999999999999999874 221 32455555566665554443221
Q ss_pred ------C--CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc-C---hHHHHHHHHHcCcEEE
Q psy12303 191 ------G--TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD-P---IEEIADICQKYNMWLH 258 (480)
Q Consensus 191 ------~--~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~-~---l~~I~~i~~~~~~~l~ 258 (480)
+ ...+..+|.+ |++++++.+.+. +++|+++..+...|.+. | +++|.++|++||++++
T Consensus 132 ~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI 200 (364)
T PRK04013 132 KYREDFEPLVPGFKHIPFN-----DVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLI 200 (364)
T ss_pred ccccCCCCCCCCcEEecCC-----CHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1 1123334333 678888887643 89999999888777764 4 9999999999999999
Q ss_pred eeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 259 VDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
+|+++.+. .....+.. ...++ .+|++++ .|.+++++++|.++.+.. . . ... +. .+
T Consensus 201 ~DEv~tG~-RtG~~~a~-~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~-~-~------~~~--~~----------~T 255 (364)
T PRK04013 201 ADEVQSGL-RTGKFLAI-EHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFD-V-E------RGK--HG----------ST 255 (364)
T ss_pred EechhhcC-CCCchhHH-HhcCC-CCCEEEe--cccccCCceeEEEEeccc-c-c------CCC--cC----------CC
Confidence 99999976 54443333 33455 6899985 699988788888886543 1 0 000 00 00
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHH
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
+ .+.+....+..++|+.+-.+++.+..++ . + ..+.. +.+.-+ .-.+.++.+.+..+
T Consensus 256 ~---~gnp~~~aaa~a~l~~i~~~~l~~~~~~---~---l-~~l~~--~~v~~v-RG~Gl~~gve~~~~----------- 311 (364)
T PRK04013 256 F---GGNPLACKAVAVTLRILRRERLVEKAGE---K---F-IEIKG--ERVVTT-RGRGLMIGIVLKKP----------- 311 (364)
T ss_pred C---CcCHHHHHHHHHHHHHHHhccHHHHHHH---H---H-HHhcc--Ccceee-eeCcEEEEEEeCCc-----------
Confidence 0 1222333444445555544444333322 2 2 22222 221111 11122233322110
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+.+.+.++|.++ .. .+ .+.+|+. +....|++|+++++++|++.+++
T Consensus 312 ------~~~i~~~~~~~Gll~-~~---~g-~~vlr~~-Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 312 ------VGKYVEELQNRGYLV-HT---AG-QRVIRLL-PPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred ------HHHHHHHHHhCCcEE-ee---CC-CCEEEEe-CCcccCHHHHHHHHHHHHHHHHH
Confidence 135677888888554 22 13 4789999 99999999999999999988754
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=5.8e-14 Score=140.62 Aligned_cols=322 Identities=14% Similarity=0.090 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCe-EECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQG--GDS-ILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~--~~~-~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
+..+.++.+.++++++... ... ++++|||+|+..|++.+|.. .|. +.+|......|.....+...
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~-------tgr-----~~Ii~~~~~yHG~t~~als~ 167 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTY-------TGR-----SNVISFSGGYHGMTHGALAV 167 (459)
T ss_pred CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHh-------cCC-----CeEEEECCCcCCccHHHHhh
Confidence 4566677888888875322 124 55689999999999999875 221 22444555667666666654
Q ss_pred cCCC---------CCCeEEeeCCCCCC--------CCHHHHHHHHHHHHH----CCCccEEEEeccCCCccccccC----
Q psy12303 188 CGLG---------TDNCVEVPSDKRGR--------LIPSELERLVLERKA----KGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 188 ~g~~---------~~~v~~v~~~~~~~--------~d~~~L~~~i~~~~~----~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
.+.. ...+..+|.....+ -+.+.+++.+++..+ ....+++|++...+...|.+.|
T Consensus 168 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~y 247 (459)
T PRK06931 168 TGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEW 247 (459)
T ss_pred cCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHH
Confidence 3311 11344555432111 123445444443322 2345899999999888887754
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++++.++|++||+++|+|+++.|+......+.+ ...++ .+|++++ .|.+++++++|++..++. +... .+..
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~-~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~~~~---~~~~ 318 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQAGFARTGKMFAF-EHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--FDAW---QPGG 318 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchhcCCcCchHHHh-hhcCC-CCCEEEe--cccccCCcceeeeeeHHH--Hhhc---cCCC
Confidence 899999999999999999999988665544444 44566 6999995 699988888998776532 2221 1111
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~ 399 (480)
.. + ++ .+.+....++.++|+.+..+ ...++..++.++|.+.|++. .|.+.-+ .-.+.+
T Consensus 319 ~~------------~--T~-~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~Glm 379 (459)
T PRK06931 319 HT------------G--TF-RGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNV-RGRGLM 379 (459)
T ss_pred CC------------C--CC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecCceE
Confidence 00 0 00 12222333334444444332 34566666677776666551 2322111 122334
Q ss_pred EEEEeecCc-cCCCc-hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 400 VSFWYLPTR-VRNMP-HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 400 v~f~~~~~~-~~~~~-~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.+.+.... ..+.. ...... .....+...+.++|.++... .. . .+.+|+. ++..+|++||+++++++++.+
T Consensus 380 ~giel~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Gvl~~~~-~~-~-~~~l~~~-Ppl~it~~eid~~~~~l~~~l 452 (459)
T PRK06931 380 IGIEIVDERQPADAMGSYPADG---ELAAAIQKACFENGLLLERG-GR-N-GNVVRLL-PPLLITQAECEEFIDRFEQAL 452 (459)
T ss_pred EEEEEccCcccccccccCCccH---HHHHHHHHHHHHCCcEEeec-CC-C-CCEEEEE-CCCCcCHHHHHHHHHHHHHHH
Confidence 444443221 00000 000000 12346778888899654322 11 1 4689999 999999999999999999876
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 453 ~~ 454 (459)
T PRK06931 453 LA 454 (459)
T ss_pred HH
Confidence 53
No 348
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=6.7e-14 Score=138.75 Aligned_cols=310 Identities=10% Similarity=-0.011 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+...++.+.++++++.+-+.+.|+++||+|+..|++.||... ...|. +++. +|......|.....+....+-
T Consensus 83 ~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~----~~~g~---~~r~~ii~~~~~yHG~t~~als~~~~ 155 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYS----KGQGH---PERTRLLTWRSGYHGDTFAAMSVCDP 155 (422)
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCccHHHhccCCC
Confidence 444567777888765333579999999999999999998741 11232 2232 455555667665555544331
Q ss_pred C----------CCCeEEeeCCCCCCCCH-------HHHHHHHHHHHHCCCccEEEEeccC-CCcccccc----ChHHHHH
Q psy12303 191 G----------TDNCVEVPSDKRGRLIP-------SELERLVLERKAKGDIPFFVNCTSG-TTVLGAFD----PIEEIAD 248 (480)
Q Consensus 191 ~----------~~~v~~v~~~~~~~~d~-------~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~----~l~~I~~ 248 (480)
. ...+..+|.......+. +.+++.+.+ .+++|+++.. +...|.+. .+++|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~ 229 (422)
T PRK05630 156 EGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRT 229 (422)
T ss_pred cccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0 01234444332111122 233333332 3889999874 67777653 3899999
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcC-Cccccccc
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQM-SAEYLFMQ 326 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~-~~~~l~~~ 326 (480)
+|++||+++|+|+++.++......+.. ...++ .+|+++ +.|.+++++ +.|++++++. ..+..... ....+.+.
T Consensus 230 lc~~~g~llI~DEv~tG~GrtG~~~a~-~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~-i~~~~~~~~~~~~~~h~ 304 (422)
T PRK05630 230 LCDKHDILLIADEIATGFGRTGELFAT-LAAGV-TPDIMC--VGKALTGGFMSFAATLCTDK-VAQLISTPNGGGALMHG 304 (422)
T ss_pred HHHHcCCEEEEecceeCCCcCchhhHH-HhcCC-CCCeee--eechhhcCccccceeeccHH-HHHHHhccCCCCccccC
Confidence 999999999999999876544333222 23455 689987 579997663 6777776543 33322110 00000000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~ 403 (480)
.++ .+.+....++.++++.+..+ ...++..++.++|.+.|++ + |.+.-+ .-.+.++.+.
T Consensus 305 ----------~T~---~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~-l~~~~~v~~v-Rg~Gl~~~ie 366 (422)
T PRK05630 305 ----------PTF---MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSP-LAHLPGVADV-RVLGAIGVVE 366 (422)
T ss_pred ----------CCC---cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHH-hhcCCCeeee-eccccEEEEE
Confidence 011 11112333344445554332 3456777777888776664 3 322211 1122333333
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+..+. . ...+.+.+.++|.++ .. . .+++|+. +....|++|||++++.|++.+++
T Consensus 367 ~~~~~-~--------------~~~~~~~~~~~Gl~~-~~---~--g~~l~~~-PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 367 MEQPV-D--------------MEEATQAAVDHGVWL-RP---F--GRLVYVM-PPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ECCcc-c--------------HHHHHHHHHHCCeEE-Ee---c--CCEEEEE-CCccCCHHHHHHHHHHHHHHHhc
Confidence 32110 0 135667888898544 32 1 2689999 99999999999999999988753
No 349
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.69 E-value=8.2e-14 Score=139.95 Aligned_cols=318 Identities=14% Similarity=0.099 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.++++++.+. ..+.|+++||+|+..|++.||.. .|. +.+|-.....|.....+....+
T Consensus 96 ~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~~ls~~~ 163 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKY-------TKR-----QGIISFSRGFHGRTLMTMTMTS 163 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHH-------hCC-----CcEEEECCCcCccchhhhhhcC
Confidence 3555677888888875432 37999999999999999999874 221 2245555566776666654433
Q ss_pred C--------C--CCCeEEeeCCCC----CCCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 L--------G--TDNCVEVPSDKR----GRLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~--------~--~~~v~~v~~~~~----~~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
. + ...+..+|.... ..+. ++.+++.+... ..+..+++|+++..+...|.+.| +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~EPi~g~gG~~~~~~~~l 242 (451)
T PRK06918 164 KVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISE-VAPETIAAVVMEPVQGEGGFIVPSKKFV 242 (451)
T ss_pred CCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhh-cCCCceEEEEECcccCCCCCccCCHHHH
Confidence 1 0 112344443211 0111 12233333211 12345889999988777787544 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
++|.++|++||+++++|++|.++......+.. ...++ ..|+++ +.|.+++++++|+++.+. ++.+.... ...
T Consensus 243 ~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~-~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~-~i~~~~~~---~~~ 314 (451)
T PRK06918 243 QEVRNICSEHGILFVADEIQTGFARTGKYFAI-EHFDV-VPDLIT--VSKSLGAGVPISGVIGRK-EIMDESAP---GEL 314 (451)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCccCceehh-HhcCC-CCCEEe--eehhhcCCCccEEEEEcH-HHHhccCC---CCc
Confidence 99999999999999999999887553322211 12233 467664 679999888999998753 34332211 000
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNV 400 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v 400 (480)
. .++ ++......++.+++..+..+. ..++..++.+++.+.|++. .+.+.-+ .+.+.++
T Consensus 315 -~-----------~T~---~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~G~~~ 375 (451)
T PRK06918 315 -G-----------GTY---AGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDV-RGLGAMC 375 (451)
T ss_pred -C-----------cCC---CcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceee-ccceeEE
Confidence 0 000 111122223333444432223 3345555556666655540 2322222 2345555
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+........+... ....+.+.+.++|.++... ... .+++|++ ++...|+++|++++++|++.+++
T Consensus 376 ~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~Gvlv~~~-~~~--~~~lrl~-p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 376 AFELVQDRKTKEPDKT-------LTANICKEANKRGLLLLSA-GTY--GNVIRVL-MPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred EEEEccCCCcCCCcHH-------HHHHHHHHHHHCCeEEeec-CCC--CCEEEEE-CCCccCHHHHHHHHHHHHHHHHH
Confidence 5544311100000001 1245677888899655432 211 3689999 77778999999999999987754
No 350
>KOG1404|consensus
Probab=99.69 E-value=1e-13 Score=127.72 Aligned_cols=311 Identities=15% Similarity=0.101 Sum_probs=195.2
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.|.+++--+-..++|++||||||.+||+++|.. .|. -..|-.....|.+...++.+-+++..+.
T Consensus 96 ~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Y-------t~~-----~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 96 DLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLY-------TGN-----LDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred HHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHh-------cCC-----ceEEEeeccccCCchhhcccccCCcccc
Confidence 4556677776655556999999999999999999986 222 1255566667888777777766643322
Q ss_pred EEeeC--------CCC---C--CC-----CHHHHHHHHHHHHH--CCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 196 VEVPS--------DKR---G--RL-----IPSELERLVLERKA--KGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 196 ~~v~~--------~~~---~--~~-----d~~~L~~~i~~~~~--~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
...-. +++ + .= .-+.+.+.+++-.. ....+++.++...+...|.+.+ +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 11100 010 0 00 12334443333221 1234788999999988898866 899999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
++|..++.|+++.++......+.+ .-.++ -.|++++ .|.++.+.+.|.+++.. ++......... +++..
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgf-e~h~v-~PDIvTm--AKgiGnG~Pl~AVvtt~-EIa~v~~~~~~-~fnTy----- 312 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGF-ESHGV-VPDIVTM--AKGIGNGFPLGAVVTTP-EIADVLNQKSS-HFNTY----- 312 (442)
T ss_pred HcCCEEEehhhhhccccccccccc-cccCC-CccHHHH--HhhccCCCcceeeecCH-HHHHHHHhccc-ccccc-----
Confidence 999999999999999887666555 45555 6899984 59999999999999754 44443332222 22110
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee--EEEEEeecCcc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV--NVSFWYLPTRV 409 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~--~v~f~~~~~~~ 409 (480)
.+.+.......+.|+.+-+ +++.++......||.+.|.+...+.+++++...- +.-..+.....
T Consensus 313 -----------ggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~ 378 (442)
T KOG1404|consen 313 -----------GGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS 378 (442)
T ss_pred -----------CCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC
Confidence 1222233333344444333 5556788889999999998722456777664432 22222222221
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
+..+.. . .....+.+.+.+.| +++..+...| +.+|++ +..-.|++||+.+++..
T Consensus 379 ~~~pp~-~-----~~~~~i~~~cke~G-vlvg~g~i~G--~vfria-PPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 379 EPKPPA-T-----AEGAVIGEQCKELG-VLVGKGGIHG--NVFRIA-PPLCITKEDIDFAVEYF 432 (442)
T ss_pred CCCCcc-h-----HHHHHHHHHHHHhC-eeeecccccc--eEEEec-CCeeccHHHHHHHHHHH
Confidence 111111 0 01235678888888 4456655555 599999 98999999998887754
No 351
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=5.1e-14 Score=141.03 Aligned_cols=313 Identities=16% Similarity=0.089 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
++...++.+.++++++.+...+.|++|||+|+..|++.+|.. .|. +..|......|.....++...|.
T Consensus 112 ~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~~a~s~~~~ 179 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI-------TGN-----FKVVSLWDSFHGASLDAISVGGE 179 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh-------cCC-----CEEEEEeCCCcCccHHHHhhcCC
Confidence 456667788888888643357999999999999999999864 221 22555666677776556554432
Q ss_pred C---------CCCeEEeeCCCCCC-----CC------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHH
Q psy12303 191 G---------TDNCVEVPSDKRGR-----LI------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIA 247 (480)
Q Consensus 191 ~---------~~~v~~v~~~~~~~-----~d------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~ 247 (480)
. ...+..+|.....+ .| ++.|++.+++ ...+++|+++..+...+.+.| +++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr 255 (459)
T PRK06082 180 ACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVR 255 (459)
T ss_pred cccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHH
Confidence 1 01234444321111 11 2446666642 124789999988766333445 89999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCCccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
++|++||+++++|++++|+......+.+ ...|+ .+|+++ +.|.+++++ ++|+++.++. +. .... ..+. +
T Consensus 256 ~lc~~~g~llI~DEV~tG~GRtG~~fa~-e~~gv-~PDiv~--~gKgl~gG~~P~~av~~~~~-i~-~~~~--~~~~-~- 325 (459)
T PRK06082 256 EICDKHNVLLIIDEIPNGMGRTGEWFTH-QAYGI-EPDILC--IGKGLGGGLVPIAAMITKDK-YN-TAAQ--ISLG-H- 325 (459)
T ss_pred HHHHHcCCEEEEechhhCCCccchhhHh-HhhCC-CCCEEE--ecccccCCCCcceEEEEcHH-HH-hhcc--CCCC-C-
Confidence 9999999999999999986554443333 33466 689998 679999874 7888887653 22 1111 0000 0
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecC--CceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILE--PEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~--~~~~~v~f~ 403 (480)
.++ .+.+....++.++|+.+.. .+.+++..++.++|.+.|++ +. ...++.. -.+.++.+.
T Consensus 326 ------------~T~-~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~-l~~~~~~i~~vrG~Gl~~~ve 388 (459)
T PRK06082 326 ------------YTH-EKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLE-MKAKYPLIGDVRGIGLLWGVE 388 (459)
T ss_pred ------------CCC-CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHH-HHhhCCCeeeeeeccceeEEE
Confidence 011 1112233333444444422 24567778888888888766 31 1222222 223333443
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+........ . .......+...+.++|.++... + .+.+|++ +...+|++||+++++++++.+++
T Consensus 389 ~~~~~~~~~----~---~~~~~~~~~~~~~~~Gvl~~~~----~-~~~i~~~-Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 389 LVTDRHTKE----R---AYDEAEAVLYRCLNNGLSFKVS----Q-GNVIQLS-PPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred EccCccccC----c---cHHHHHHHHHHHHhCCCEEEec----C-CCEEEEe-CCCccCHHHHHHHHHHHHHHHHH
Confidence 321110000 0 0011346777888899654321 2 4789999 88899999999999999987654
No 352
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.69 E-value=2.4e-14 Score=142.79 Aligned_cols=312 Identities=16% Similarity=0.115 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
..+.++.+++++++.. ...+.|++||++|+..|++.++.. .|. +.+|......|.....+....|.+
T Consensus 90 ~~~~~la~~L~~~~~~-~~~v~~~~sGseA~e~Aik~a~~~-------~g~-----~~ii~~~~~yHG~t~~~~~~~~~~ 156 (426)
T PRK00062 90 ELEVELAELVIELVPS-IEMVRMVNSGTEATMSAIRLARGY-------TGR-----DKIIKFEGCYHGHADSLLVKAGSG 156 (426)
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEecCHHHHHHHHHHHHHHH-------hCC-----CeEEEEcCccCCchhhhhhccCcc
Confidence 4455677888887632 246999999999999999999864 121 324555555666543333332210
Q ss_pred ----------CC------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 192 ----------TD------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 192 ----------~~------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
.. .+..+|. -|++++++.+++. +.++++|+++......|.+.| +++|.++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~ 228 (426)
T PRK00062 157 AATLGLPDSPGVPEDFAKHTLTAPY-----NDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCD 228 (426)
T ss_pred ccccCCCCCCCCCcccccceEEcCC-----CCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 00 0111221 2788999888642 234889999988888999988 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+++++|++|.++ ........ ...++ ..|+++ +.|.++++++.|+++. ++++..........+...+
T Consensus 229 ~~~~llI~DEv~~G~-r~g~~~~~-~~~~~-~pDi~~--~gK~l~~G~p~ga~~~-~~~i~~~~~~~~~~~~~~T----- 297 (426)
T PRK00062 229 EHGALLIFDEVMTGF-RVALGGAQ-GYYGV-TPDLTT--LGKIIGGGLPVGAFGG-RREIMEQLAPLGPVYQAGT----- 297 (426)
T ss_pred HcCCEEEEeechhcc-ccCCccHH-HHhCC-CcchHh--hhhHhhCCCcceeeeE-HHHHHHhhccCCCceeccc-----
Confidence 999999999999876 32222111 22333 467655 6799987777888765 4444443321111111110
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
+ ++.+....++.++|..+..+ +..++..++.+++.+.|++ . .++..-....+.++.+.+.+..
T Consensus 298 -------~---~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~vrg~G~~~~i~l~~~~ 363 (426)
T PRK00062 298 -------L---SGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE-AAKKAGIPLTVNRVGSMFGLFFTDEP 363 (426)
T ss_pred -------C---cCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH-HHHHcCCceEEEEecceEEEEEecCC
Confidence 0 11122333444445544222 3556666666666666653 1 1333211234445555443321
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..........+ ......+.+.+.++|.+ +.+. + .+.++++ ..+|++||+++++.+++++++
T Consensus 364 ~~~~~~~~~~~--~~~~~~i~~~l~~~Gv~-v~~~---~-~~~~~~~---~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 364 VTNYADAKKSD--TERFARFFHAMLDEGVY-LAPS---Q-FEAGFVS---AAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred Ccchhhhcccc--HHHHHHHHHHHHHCCeE-eecC---C-cCceeee---ccCCHHHHHHHHHHHHHHHHh
Confidence 11000000000 01124677888888844 4432 1 2345654 677999999999999988765
No 353
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.68 E-value=6.2e-14 Score=139.46 Aligned_cols=311 Identities=12% Similarity=0.045 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCCC-
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGLG- 191 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~~- 191 (480)
..++.+.++++++-+-..+.|+++||+|+..|++.++... ..+|. +| ..+|......|.....+....+..
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~----~~~~~---~~r~~il~~~~~yHG~t~~~~s~~~~~~ 162 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYW----QAKGE---KNRQKFLTIRSGYHGDTFGAMSVCDPEN 162 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhhCC---CCccEEEEEcCCcCCccHhhhcccCCcc
Confidence 3456777888875433579999999999999999998742 11122 22 225566666676655555443321
Q ss_pred ---------CCCeEEeeCCCC-C--C---CCHHHHHHHHHHHHHCCCccEEEEeccC-CCccccc----cChHHHHHHHH
Q psy12303 192 ---------TDNCVEVPSDKR-G--R---LIPSELERLVLERKAKGDIPFFVNCTSG-TTVLGAF----DPIEEIADICQ 251 (480)
Q Consensus 192 ---------~~~v~~v~~~~~-~--~---~d~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~----~~l~~I~~i~~ 251 (480)
...+..+|.... . . -|++++++.+++. +..+++|++... +...|.+ ..+++|.++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~ 239 (427)
T TIGR00508 163 SMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCK 239 (427)
T ss_pred cccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHH
Confidence 011223322111 1 1 1456677777532 234788888875 5555543 45899999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcCC-cccccccccc
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQMS-AEYLFMQDKL 329 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 329 (480)
+||+.+++|+++.+.......+.. ...++ .+|+++ ..|.+++++ +++.++.++ +......... ..+....
T Consensus 240 ~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v-~pDi~~--~gK~l~gG~~p~~a~~~~~-~~~~~~~~~~~~~~~~~~--- 311 (427)
T TIGR00508 240 QYDILLIADEIATGFGRTGKLFAC-EHAGV-VPDILC--VGKALTGGYMTLSATVTTD-KVAQTISSGEAGCFMHGP--- 311 (427)
T ss_pred HcCCEEEEeccccCCCcCCccchh-hhcCC-CCCEEE--echhhhcCcccceEEEEcH-HHHHHHhcCCCCccccCC---
Confidence 999999999999765333322222 23345 688887 579987764 677777543 3333322110 1111110
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecC
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPT 407 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~ 407 (480)
++ .+.+....++.++++.+..+ +..++..++.++|.+.|++ +.....+.. ..+.++.+.+...
T Consensus 312 --------T~---~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~-l~~~~~i~~vrg~G~~~~i~~~~~ 376 (427)
T TIGR00508 312 --------TF---MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSP-LRKNPVVKDVRVLGAIGVVEMYKP 376 (427)
T ss_pred --------CC---CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH-hhcCCCEEeEeccccEEEEEECCc
Confidence 00 11123333444455544222 3467888888888888877 422111111 1123333333211
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ....+.++|.++|+++ ... .+.+|++ ++..+|++|||++++++++.+++
T Consensus 377 ~---------------~~~~~~~~l~~~Gv~~-~~~-----~~~l~~~-ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 377 V---------------NVEELQKKFVEQGVWI-RPF-----GKLIYVM-PPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred c---------------CHHHHHHHHHHCCeEE-Eec-----CCEEEEE-CCCCCCHHHHHHHHHHHHHHHhc
Confidence 0 0235778888898543 321 2479998 88889999999999999998764
No 354
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=1.2e-14 Score=138.88 Aligned_cols=334 Identities=15% Similarity=0.034 Sum_probs=208.0
Q ss_pred ccccccCCCC-hHHhHHHHHHHHcCcCC---c---chhcChhhHHHHHHHHHHHHHHhCCCC-CCeE-ECCChhHHHHHH
Q psy12303 75 FMNQLSCGLD-VVSMAGEWLIATANTNM---F---TYEIAPVFILMETVVLEKMRQIIGWQG-GDSI-LAPGGSISNLYA 145 (480)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~---~---~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~-~t~ggt~a~~~a 145 (480)
-+++.++|.. |..++.++-.+.++.+. . ....++.+.++-.++.+.+.++++.|+ ..++ ++.|||.++.++
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~ 84 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMI 84 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHH
Confidence 4566666544 55666666666666443 1 112357778888899999999999964 4555 455588877766
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEE-EecCCCchh--HHHHHHHcCCCCCCeEEeeC----CCCCCCCHHHHHHHHHHH
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVM-FTSDQCHYS--VRSCAAVCGLGTDNCVEVPS----DKRGRLIPSELERLVLER 218 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~v-l~~~~~h~s--~~~~~~~~g~~~~~v~~v~~----~~~~~~d~~~L~~~i~~~ 218 (480)
++-... +|+.++ ++. ..+.+ +.+.++.+| ++..+.. +.....+++++ .+.++
T Consensus 85 ~~Nll~--------------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~--~~~~d 143 (364)
T PRK12462 85 PMNFSR--------------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAEL--DWDAR 143 (364)
T ss_pred HHHcCC--------------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHh--ccCCC
Confidence 665543 334233 333 24443 334444444 2233321 11223455554 12222
Q ss_pred HHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc
Q psy12303 219 KAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL 298 (480)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p 298 (480)
...|.+|+..|.+|+..| ++.+.++.++++|++-+.+..+++..++ |++..+.+|.++ |
T Consensus 144 ------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~---------dvi~agsQKnlg-P 202 (364)
T PRK12462 144 ------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY---------GMVYAHAQKNLG-P 202 (364)
T ss_pred ------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc---------cEEEeeccccCC-C
Confidence 678999999999999876 3333468999999999988877766543 999999999999 8
Q ss_pred ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH--HHHHHHHHHHHHH
Q psy12303 299 LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE--GFEKQIDRLMELA 375 (480)
Q Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~--~~~~~~~~~~~l~ 375 (480)
.|.++++++++.+ .......+.|+.-.... +-. ..+ .+-+ +....+-..++.+-.+ |++++.+++.+.+
T Consensus 203 ~Gltvvivs~~al-~~~~~~~p~~ldy~~~~-----~~~-s~~-nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka 274 (364)
T PRK12462 203 AGVTVAIIRRALL-ERVPDTLPPMLDFRTHV-----EHR-SNY-NTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKA 274 (364)
T ss_pred CceEEEEECHHHH-hhccccCCchhhHHHHH-----hcC-CCC-CCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9999999887643 33332223332210000 000 000 0100 1233444455555556 8999999999999
Q ss_pred HHHHHHHhcCCCCeEEec-C---CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccE
Q psy12303 376 EYMVKKIKSMPDKFYLIL-E---PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNF 451 (480)
Q Consensus 376 ~~l~~~l~~~~~g~~~~~-~---~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~ 451 (480)
+.+++.+.+ .+++.... . ....+++|+...+. + ..++.+...+.|.+.+.. +.. .+.
T Consensus 275 ~~ly~~id~-~~~~~~~~~~~~~RS~mnv~f~~~~~~------------l---~~~f~~~a~~~gl~~lkG--hr~-vgg 335 (364)
T PRK12462 275 AMLYATLDA-LNEVIDCHAHRAARSTMNVAFRFRQPR------------L---DTLFKEQSTEAGFCGLSG--HRS-IGG 335 (364)
T ss_pred HHHHHHHHh-CCCcccCCCChhhcCcceEEEEcCCHH------------H---HHHHHHHHHHCCCccccC--Ccc-cCc
Confidence 999999999 77665432 1 23456777532111 2 256677777888554332 222 356
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 452 FRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 452 ~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+|.| +....+.++++.|++-+++..+
T Consensus 336 ~Ras-~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 336 IRAS-LYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred eEEE-cCCCCCHHHHHHHHHHHHHHHH
Confidence 9999 8888999999999999998765
No 355
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.68 E-value=6.3e-14 Score=134.97 Aligned_cols=320 Identities=14% Similarity=0.135 Sum_probs=196.3
Q ss_pred HHHHHHHHHhCC-CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEe-cCCCchhHHHHHHHcCCCC-
Q psy12303 116 VVLEKMRQIIGW-QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFT-SDQCHYSVRSCAAVCGLGT- 192 (480)
Q Consensus 116 ~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~-~~~~h~s~~~~~~~~g~~~- 192 (480)
++.+.|+++.+- +=+.++|++|||+|+..|+++++... +.+|. |++.+++. ...+|.+...++...|...
T Consensus 91 ~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~----~~~G~---p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~ 163 (449)
T COG0161 91 ELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYW----RARGQ---PQRKKFISRRNGYHGDTLGAMSVGGPVAL 163 (449)
T ss_pred HHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHH----HhcCC---CcceEEEEeccCcCcccchheeccCchhh
Confidence 466778888772 23579999999999999999999863 44554 43434444 4455777666666655211
Q ss_pred ---------CCeEEeeCCC------CCCCC------HHHHHHHHHHHHHCC-CccEEEEeccCCCc-cccccC----hHH
Q psy12303 193 ---------DNCVEVPSDK------RGRLI------PSELERLVLERKAKG-DIPFFVNCTSGTTV-LGAFDP----IEE 245 (480)
Q Consensus 193 ---------~~v~~v~~~~------~~~~d------~~~L~~~i~~~~~~~-~~~~~v~~~~~~~~-~G~~~~----l~~ 245 (480)
..+..+|... ++.-+ .++||+.|.+ .| .+++++++...... .|.+.| +++
T Consensus 164 ~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 164 RHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---HGPETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEEEEecccccccCCcccCChHHHHH
Confidence 1223333321 12223 3345555444 34 55888888888777 666654 899
Q ss_pred HHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
|.+||++||+++|+|++-.|+......+.. ...++ ..|++|+ .|.+.++ .+.|.+++.++ +.+........-+.
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~gi-~PDi~~~--aKGLT~GY~Pl~a~l~~~~-I~~~~~~~~~~~f~ 315 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFAC-EHAGI-VPDILCL--AKGLTGGYLPLSAVLTSDR-IYEAFSDGDAGAFM 315 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcCC-CCCeeee--cccccccchhhHhHhhhHH-HHHHHhcccCCeec
Confidence 999999999999999999998877666655 55666 7899995 5988776 46788887654 33332221112221
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeEEEE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVNVSF 402 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~f 402 (480)
+. .+.....+++.+++..+..-.-+.++++..++..+|.+.|++..++...+++. .+.+..+
T Consensus 316 HG----------------~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~i 379 (449)
T COG0161 316 HG----------------HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAI 379 (449)
T ss_pred cC----------------CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEE
Confidence 21 12223455555555544322224456777788888888887512222333332 2233344
Q ss_pred EeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 403 WYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+....-.. ..+.. .....+.+.+.++|.++.+. + ..+=++ +.+..|+++|+++++.+++.+++
T Consensus 380 Elv~d~~t~---~~f~~---~~~~~~~~~~~e~Gl~iRp~----g--~~i~~~-PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 380 ELVADKATK---TPFEA---RVGARVRAAALERGLLIRPL----G--DVIYLM-PPLIITREEIDELVDALREALDE 443 (449)
T ss_pred EEecccccc---cchhh---hHHHHHHHHHHHCCeEEeec----C--CEEEEc-CCccCCHHHHHHHHHHHHHHHHH
Confidence 443322110 01111 12356778888999554443 2 467777 88899999999999999987753
No 356
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.67 E-value=4.4e-14 Score=140.06 Aligned_cols=314 Identities=13% Similarity=0.088 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH---HHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR---SCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~---~~~~~ 187 (480)
+..+.++.+.+.++++.....+.|+++||+|+..|++.||.. +|. ..+|......|.... .+...
T Consensus 92 ~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~-------tgr-----~~ii~~~~~yHG~td~~~~~~~~ 159 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI-------TGR-----SIIIKFLGCYHGHADTLLQGISF 159 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh-------hCC-----CEEEEEcCccCCCCcccCccccc
Confidence 345566778888887654357999999999999999999875 221 223444445566431 12111
Q ss_pred cCCCCC-------------CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 188 CGLGTD-------------NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 188 ~g~~~~-------------~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
.+.... ....+|. -|+++|++.+++. +..+++|+++......|.+.| +++|.++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc 231 (433)
T PRK00615 160 SETSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTC 231 (433)
T ss_pred CCCCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHH
Confidence 111000 0111111 2788899888643 234789999999998898877 46999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|+++.|+ ........ ...++ ..|+++ +.|.+++++++|+++.++ ++.+........+..+
T Consensus 232 ~~~g~llI~DEv~tG~-R~G~~ga~-~~~gv-~PDi~~--~gK~lggG~p~~av~~~~-~i~~~~~~~~~~~~~~----- 300 (433)
T PRK00615 232 RRTGSLSIMDEVVTGF-RVAQGGAA-AIYHV-KPDITV--YGKILGGGLPAAAVVAHK-SIMDHLAPEGTIFQAG----- 300 (433)
T ss_pred HHcCCEEEEEcccccc-cccHhHHH-HhcCC-CCCeEE--EcccccCCcceeeeeecH-HHHhhhcCCCCcccCC-----
Confidence 9999999999999765 32222222 23345 689887 579998767788887654 3443321110001100
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecC
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~ 407 (480)
++ .+.+....+..++|+.+..+ ...++..++.++|.+.|++ . .++.+.......++.+.+...
T Consensus 301 -------T~---~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~-~~~~~g~~v~~~r~G~~~~i~~~~~ 366 (433)
T PRK00615 301 -------TL---SGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEE-MIRSQGFPVSLVRYGSMFSFFFNEN 366 (433)
T ss_pred -------CC---cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH-HHHHcCCCeEEEeeceEEEEEEeCC
Confidence 00 11112333444445544332 3456666666676555544 1 233321111344455555432
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+.. .....-.+....+...|.++|.+ +.+..... . +.+..+|++|||++++++++.+++
T Consensus 367 ~~~~~~--~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~--~-----~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 367 RPNNLA--EAQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA--S-----FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred CCCChH--HHhhCCHHHHHHHHHHHHHCCee-ecCccccc--c-----ceecCCCHHHHHHHHHHHHHHHHH
Confidence 211100 00000011234678889999844 33321111 1 255677999999999999998764
No 357
>KOG1402|consensus
Probab=99.67 E-value=4.3e-14 Score=127.01 Aligned_cols=305 Identities=14% Similarity=0.112 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC--chhHHHHH---
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC--HYSVRSCA--- 185 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~--h~s~~~~~--- 185 (480)
...-.+..+.+.++||++. +.-+++|.||+..|+..+|.+.+ ..+++ |.+..++++... |.-...+.
T Consensus 100 nd~~~~f~~~vt~lf~~~k--vlpmnTGaEa~Eta~KLaR~wgy---~~K~i---p~nka~il~~~~nFhGrT~~ais~s 171 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDK--VLPMNTGAEAVETACKLARKWGY---RKKNI---PKNKAKILSAENNFHGRTLGAISLS 171 (427)
T ss_pred hhhHHHHHHHHHHhcCcce--eeecccchhHHHHHHHHHHHHHH---hhccC---CccceeEEEecccccCceeeeEEec
Confidence 4455567788999999987 78889999999999999996532 23343 322233333322 32221111
Q ss_pred ----HHcCCCC--C-CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcC
Q psy12303 186 ----AVCGLGT--D-NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYN 254 (480)
Q Consensus 186 ----~~~g~~~--~-~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~ 254 (480)
.+.|.|+ . .+..||.+ |.++|+.+++.. ..+++++...+...|.+.| ++++.++|++|+
T Consensus 172 ~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~-----~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkyn 241 (427)
T KOG1402|consen 172 TDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSP-----NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYN 241 (427)
T ss_pred CCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCC-----CeeEEEeeccccccceEeCCchhHHHHHHHHHhhc
Confidence 1112221 1 25566666 899999999863 3788999999999999865 899999999999
Q ss_pred cEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR 333 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 333 (480)
++++.|++|.|.......... ....+ ..|++. +.|.+.++ ++.++++..+ +++.... +.
T Consensus 242 vl~I~DEvQTGl~RTGk~la~-d~env-~PDivi--lgKalSGG~~Pvsavl~~~-~im~~~~---pg------------ 301 (427)
T KOG1402|consen 242 VLLIADEVQTGLARTGKLLAC-DYENV-RPDIVI--LGKALSGGVYPVSAVLADD-DIMLNIK---PG------------ 301 (427)
T ss_pred EEEEehhhhhcccccCcEEEe-ehhhc-CCCeEE--EeccccCCeeeeEEEEecH-HHHhccC---CC------------
Confidence 999999999998775554433 33444 689888 56888765 6788888654 3332211 11
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-Ce----EEecCCceeEEEEEeecCc
Q psy12303 334 YDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KF----YLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 334 ~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~----~~~~~~~~~~v~f~~~~~~ 408 (480)
.++ .+...+.++...++..+..-.-+++.++...+...|+.+|.+ ++ .+ ..+ .-.+-...+.+.|..
T Consensus 302 ----eHg--sTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~-l~~~~p~~v~~V-RGrGl~~ai~i~~~~ 373 (427)
T KOG1402|consen 302 ----EHG--STYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNK-LQKKFPHVVKEV-RGRGLLNAIVINPSK 373 (427)
T ss_pred ----ccc--cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccccchhhee-eccceEEEEEecccc
Confidence 000 111123334333333332222256678899999999999988 53 22 211 122222233334333
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++.+ .-+++-++.+.|.+.-+. . .+.+|+. +....+++|+++-+++|++.+.
T Consensus 374 ~~~~~-----------aw~~cl~lk~~g~LAkpt---H--~~IiRfa-PPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 374 TSGQD-----------AWDVCLALKENGLLAKPT---H--GNIIRFA-PPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccchh-----------HHHHHHcccccccccCCC---C--CCeEEec-CCcccCHHHHHHHHHHHHHHhc
Confidence 22111 123455666777443222 1 3699999 9999999999999999988753
No 358
>PRK06149 hypothetical protein; Provisional
Probab=99.67 E-value=2.4e-13 Score=148.13 Aligned_cols=319 Identities=15% Similarity=0.079 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL- 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~- 190 (480)
....++.+.+++++..+-..+.|++|||+||..|++.||.. .|. +..|......|.....+....+-
T Consensus 624 ~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~-------tgr-----~~ii~~~~~yHG~t~ga~~~s~~~ 691 (972)
T PRK06149 624 AAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAA-------SGR-----RDVVSVLEAYHGWTVATDAVSTSI 691 (972)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHh-------cCC-----CeEEEEeCCCCCcChhHhhhcCCc
Confidence 44556777788887432246999999999999999999864 221 32555666677655444333221
Q ss_pred ---------CCCCeEEeeCCCCCC--C---C-----HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHH
Q psy12303 191 ---------GTDNCVEVPSDKRGR--L---I-----PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIA 247 (480)
Q Consensus 191 ---------~~~~v~~v~~~~~~~--~---d-----~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~ 247 (480)
....+..++.....+ . + .+++++.++.....+..+++|++.......|.+.| +++|.
T Consensus 692 ~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~ 771 (972)
T PRK06149 692 ADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVY 771 (972)
T ss_pred cccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHH
Confidence 011233443322111 1 2 35666666554445566899999999888899888 99999
Q ss_pred HHHHHcCcEEEeeccccccccccc-cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSK-KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQ 326 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 326 (480)
++|++||+++|+|+++.|+..... .+.. ...|+ .+|+++ +.|.+++++++|++++++ ++.+.... ..+++++
T Consensus 772 ~lc~~~g~llI~DEV~tGfGRtG~~~~a~-e~~gv-~PDivt--~gK~lg~G~Pl~av~~~~-~i~~~~~~--~~~~~sT 844 (972)
T PRK06149 772 AAVRARGGVCIADEVQVGYGRLGHYFWGF-EQQGV-VPDIIT--MAKGMGNGHPLGAVITRR-EIAEALEA--EGYFFSS 844 (972)
T ss_pred HHHHHcCCEEEEEeehhcCCccCccchhh-hhcCC-CCCEEE--ecccccCCeeeEEEEEcH-HHHhhhcc--CCcccCC
Confidence 999999999999999976654433 1122 23456 689997 569999878899998764 33332211 0111110
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~ 403 (480)
. .+.+....+..++|..+-.+ ++.++..++.++|.+.|++. .|-+..+ .-.+.++.+.
T Consensus 845 --------------~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~Gl~~gve 905 (972)
T PRK06149 845 --------------T-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAV-HGMGLYLGVE 905 (972)
T ss_pred --------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-eecceEEEEE
Confidence 0 12222333344444443332 45567777777777777651 2222222 1222333343
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.......... ......+.+++.++|.++ .+... . .+++|+. +...+|++||++++++|++.+++
T Consensus 906 l~~~~~~~~~~-------~~~~~~i~~~l~~~Gvl~-~~~g~-~-~~vl~~~-Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 906 LVRDRQTLEPA-------TEETAAICDRLLELGVIM-QPTGD-H-LNILKIK-PPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EecCcccCCCC-------hHHHHHHHHHHHhCCeEE-eecCC-C-CCEEEEE-CCCcCCHHHHHHHHHHHHHHHHh
Confidence 33211000000 011346788899999554 33211 1 3689998 88899999999999999998754
No 359
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.66 E-value=3e-13 Score=135.17 Aligned_cols=314 Identities=13% Similarity=0.085 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-C
Q psy12303 114 ETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL-G 191 (480)
Q Consensus 114 e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~-~ 191 (480)
..++.+.+++..+.+. ..++|+++|++|+..|++.++.. .| + ..+|.++...|.....+...-+. .
T Consensus 86 ~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~-------~~----r-~~iv~~~~~yHG~~~~~~~~~~~~~ 153 (425)
T PRK08088 86 YLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAA-------TK----R-SGVIAFTGAYHGRTHYTLALTGKVN 153 (425)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHH-------hC----C-CeEEEECCccCCccHHHHHhhCCCC
Confidence 3467788888776533 47899999999999999999864 11 1 22566677777776555544321 0
Q ss_pred ---------CCCeEE--eeCCCCCCCC----HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHH
Q psy12303 192 ---------TDNCVE--VPSDKRGRLI----PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQK 252 (480)
Q Consensus 192 ---------~~~v~~--v~~~~~~~~d----~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~ 252 (480)
...+.. +|.+.++ ++ +++|++.++.. ..+..+++|+++......|.+.+ +++|.++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~ 231 (425)
T PRK08088 154 PYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDE 231 (425)
T ss_pred ccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH
Confidence 111222 2222221 22 45577777532 12344889999888888787766 8999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
||+++++|++|++.......... ...++ ..|+ .++.|.++.++++|+++.+ .+..+...... ...
T Consensus 232 ~~~~lI~Dev~~g~g~~g~~~~~-~~~~~-~pdi--~s~sK~l~~G~rig~v~~~-~~~~~~~~~~~---~~~------- 296 (425)
T PRK08088 232 HGIMLIADEVQTGAGRTGTLFAM-EQMGV-AADL--TTFAKSIAGGFPLAGVTGR-AEVMDAIAPGG---LGG------- 296 (425)
T ss_pred cCCEEEEeccccCCCcCcchhHH-hhcCC-CCCE--EEEeccccCCCcceeeEec-HHHHhhcCCCC---CCC-------
Confidence 99999999999975332211111 12232 3564 4578999977889999864 33433321100 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCcc
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
++ . ...+...+++..+..-..+++.++.+++.+++.+.|.+. .|.+.-+..+ +.++.+.+.....
T Consensus 297 -----t~---~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~ 364 (425)
T PRK08088 297 -----TY---A---GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGD 364 (425)
T ss_pred -----CC---C---cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCC
Confidence 00 1 122233333333221122344455555555555544330 3444333222 3333443321110
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...... .....+.+.+.+.|.++..... . .+.+|++ ++..+++++|++.++.|++.+++
T Consensus 365 ~~~p~~-------~~~~~l~~~~~~~Gv~~~~~~~--~-~~~iRl~-~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 365 HSKPNA-------KLTAQIVARARDKGLILLSCGP--Y-YNVLRIL-VPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCCCCH-------HHHHHHHHHHHhCCCEEecCCC--C-CCEEEEE-CCCCcCHHHHHHHHHHHHHHHHh
Confidence 000000 0135677888899966543211 1 4789999 77788999999999999988754
No 360
>PRK07046 aminotransferase; Validated
Probab=99.66 E-value=1.6e-13 Score=136.97 Aligned_cols=313 Identities=17% Similarity=0.141 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc--
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC-- 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~-- 188 (480)
++.+.++.+.++++++. ..+.|+++||||++.|++.||.. +|. +.+|-.....|..........
T Consensus 114 ~~~~~~lAe~l~~~~~~--~~v~F~nSGtEA~e~AlrlAR~~-------TGr-----~~ii~~~g~YHG~~d~~l~~~~~ 179 (453)
T PRK07046 114 SEDAAWVGEELARRFGL--PYWQVATTATDANRFVLRWARAV-------TGR-----PKILVFNGCYHGTVDDVFVDLVD 179 (453)
T ss_pred CHHHHHHHHHHHHHhCC--CEEEEECCHHHHHHHHHHHHHHh-------hCC-----CEEEEECCCCCCCcHHhHhhccC
Confidence 46677788889998864 35999999999999999999975 232 324445556676543333221
Q ss_pred C----------CC---CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 189 G----------LG---TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 189 g----------~~---~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
+ .. ...+..+|.+ |++++++.+.. ..+++|+++......|.+.| ++++.++|+
T Consensus 180 ~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~ 249 (453)
T PRK07046 180 GRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTR 249 (453)
T ss_pred CCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 1 00 0112233332 78899888842 23889999999888888866 899999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+.+|+|+++. +..-.... . ...++ .+|+++ +.|.+++++++|++..++ ++.............+.
T Consensus 250 ~~g~llI~DEV~t-fr~g~Gg~-~-~~~gv-~PDi~t--~gK~lggG~Pi~av~g~~-~i~~~~~~~~~~~~~~~----- 317 (453)
T PRK07046 250 RYGTLLVIDETHT-ISSGPGGY-T-RAHGL-EPDFLV--VGKPIAGGVPCAVYGFSA-ELAERAQAAKASAPPGH----- 317 (453)
T ss_pred HhCCEEEEEcccc-CccCCcch-h-HHhCC-Ccccee--ehhhhcCCCcceeeeehH-HHHHHHhhccccCCCCC-----
Confidence 9999999999986 11101111 1 22355 689998 579999888999888654 44443321100000000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CC-CeEEecCCceeEEEEEeecC
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PD-KFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~-g~~~~~~~~~~~v~f~~~~~ 407 (480)
....+++ .+.+....+..++|+.+.. .+..++..++.++|.+.|++. .+ ...+.+. ...+.+.+.+.
T Consensus 318 -~~~~~T~---~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~--G~~~~i~~~~~ 388 (453)
T PRK07046 318 -SGIGTTL---SANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRV--GARVEFQFAPT 388 (453)
T ss_pred -ceeCCCC---cccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe--CcEEEEEEeCC
Confidence 0000011 1111222333344444322 234556666666666666530 22 1222222 22344444322
Q ss_pred ccCCCchhhHHHHhh-hhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILG-EITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~-~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+. .+.....+ .+...+...+.++|.++... .+.++++ + .+|++||+++++++++.+++
T Consensus 389 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------~~~~~~~-p--~~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 389 PPRNG--AEAAAALDPELEAALHLYLLNRGVLITPF------HNMMLVC-P--ATTAADVDRLVAAFDACLGE 450 (453)
T ss_pred CCCCH--HHHhcccCHHHHHHHHHHHHHCCCEEecc------cCcEEEe-C--CCCHHHHHHHHHHHHHHHHH
Confidence 21110 00000000 12346777888898554321 2467777 4 48999999999999988764
No 361
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=5e-14 Score=125.04 Aligned_cols=314 Identities=13% Similarity=0.144 Sum_probs=183.7
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
.+.|....+...+-+.+...+.+-+|+ .+.++.+|+|+..+.+++......+. ..|. . +.+++--.+++
T Consensus 67 ~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~-----sdG~---~-k~illPLaPeY 137 (417)
T COG3977 67 LCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRR-----SDGT---E-KKILLPLAPEY 137 (417)
T ss_pred HhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCcc-----CCCc---c-eeEeeccChhh
Confidence 456776777778888889999999998 45789999999999998887665431 2232 1 21333333444
Q ss_pred hhHHHHHHHcCCCCCCeEEeeC----CC----CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHH
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPS----DK----RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIA 247 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~----~~----~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~ 247 (480)
..+..+ |+..+.++.+.. .+ .+++|.++|. +.+. +-+|+++-|+||||.+ +.+.+|.
T Consensus 138 iGY~d~----~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~------~g~ic~SRPtNPTGNVlTdeE~~kld 205 (417)
T COG3977 138 IGYADA----GLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGES------TGAICVSRPTNPTGNVLTDEELAKLD 205 (417)
T ss_pred cccccc----ccCccceeeccCCcccccccceeeccCHHHcc--cccc------cceEEecCCCCCCCCcccHHHHHHHH
Confidence 333222 222222222211 11 3477877774 2333 7899999999999998 4588888
Q ss_pred HHHHHcCcEEEeecccccccc---ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLL---LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLF 324 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~---~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~ 324 (480)
++|++||+++++|.|||...- +.+... ... .--+.|+|.+|.+..+..||+++.+ +.......+..
T Consensus 206 alA~~~giPliIDnAYg~PFP~iifsd~~~--~w~---~NiilC~SLSK~GLPG~R~GIiIan-e~viqaitnmn----- 274 (417)
T COG3977 206 ALARQHGIPLIIDNAYGVPFPGIIFSDATP--LWN---ENIILCMSLSKLGLPGSRCGIIIAN-EKVIQAITNMN----- 274 (417)
T ss_pred HHhhhcCCcEEEecccCCCCCceecccccc--cCC---CCEEEEeehhhcCCCCcceeEEEcc-HHHHHHHHhcc-----
Confidence 899999999999999997643 222211 111 2236789999999877889998854 44444332111
Q ss_pred ccccccCcccCCCCccccCCCCCCchHHHHH----HHHhcHHHHHH-HHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE
Q psy12303 325 MQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQ----WRAKGDEGFEK-QIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN 399 (480)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~----l~~~g~~~~~~-~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~ 399 (480)
+..++..+|-..++++-+. |..+...-++- ..++.+.....++..|-+ +.+.+ .+|++.+
T Consensus 275 ------------~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~--~~~~i-HkpEGAI 339 (417)
T COG3977 275 ------------GIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE--YRCLI-HKPEGAI 339 (417)
T ss_pred ------------ceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc--cceee-ecCCcce
Confidence 1112222332333322211 11111111111 112222233333333333 33444 5788888
Q ss_pred EEE-EeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------CCcccEEEEecccCCCCHHHHHHHH
Q psy12303 400 VSF-WYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------NDLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 400 v~f-~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------~~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
+.| ||..-.+. +.+++++|.++|.++++...+ ...+.|+|++ +.-+++.|+.-+
T Consensus 340 FlWLWf~dLPIt--------------t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn---~~~~~~~ie~Gv 402 (417)
T COG3977 340 FLWLWFKDLPIT--------------TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN---YVPEPEKIEKGV 402 (417)
T ss_pred eehhhhccCCCC--------------HHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe---cCCCHHHHHHHH
Confidence 875 33322221 468899999999887764322 1225799988 444788888888
Q ss_pred HHHHHhhc
Q psy12303 471 TEMDRLGH 478 (480)
Q Consensus 471 ~~l~~~~~ 478 (480)
..|.+.++
T Consensus 403 a~lae~ve 410 (417)
T COG3977 403 AILAEEVE 410 (417)
T ss_pred HHHHHHHH
Confidence 88776554
No 362
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.65 E-value=2.9e-14 Score=133.97 Aligned_cols=314 Identities=14% Similarity=0.141 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHhCCCC-CCeEECCChh-HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 112 LMETVVLEKMRQIIGWQG-GDSILAPGGS-ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~-~~~~~t~ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...+...+-+..|.+. ...+.++.+| +++.+.+.+++.+ |....|+.+...|+|-.+++...|
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r-------------~~a~~Viw~ridqkSc~kai~~AG 122 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMR-------------PKAKYVIWPRIDQKSCFKAIERAG 122 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHH-------------CT--EEEEEEEETHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcc-------------cCCceEEEeeccccchHHHHHhcC
Confidence 344455555667788875 3466676666 4566666666522 223389999999999999999999
Q ss_pred CCCCCeEEeeCC--CC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-hHHHHHHHHHcCcEEEeeccccc
Q psy12303 190 LGTDNCVEVPSD--KR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-IEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 190 ~~~~~v~~v~~~--~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
+ +++.||.. ++ -..|.+.+++++++. |..+.+.++++.+...|...| +++|+++|++||++.++-+|||.
T Consensus 123 l---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgv 196 (389)
T PF05889_consen 123 L---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGV 196 (389)
T ss_dssp ----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTT
T ss_pred C---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhh
Confidence 9 77777742 22 356788899988654 445789999999999998855 99999999999999999999998
Q ss_pred ccccccc-ccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 266 GLLLSKK-YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 266 ~~~~~~~-~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
-.-.+-. .. .......+|.++-|.-|-+.+|-|.+.+...++..+......-++-...
T Consensus 197 Q~~~~~~~i~--~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~------------------- 255 (389)
T PF05889_consen 197 QSSKCMHLIQ--QAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASA------------------- 255 (389)
T ss_dssp T-HHHHHHHH--HHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTS-------------------
T ss_pred hHHHHHHHHH--HHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhc-------------------
Confidence 3321110 00 0000115788888888999999888888877776554433211111100
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccCCCchhhHHHHh
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNIL 421 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l 421 (480)
...+....++..+|..++...+....++-.++.+.|++ . -+-++...|...+. +.+.-..+..... +..
T Consensus 256 --sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~-~aee~~e~ll~~p~N~is-~a~tl~~l~~~~~----k~~ 327 (389)
T PF05889_consen 256 --SPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKK-WAEEVGERLLETPRNHIS-MAFTLDTLYEISQ----KDG 327 (389)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTEEBSSSTT-SSE-EEEE-TTCCTCCS----SHH
T ss_pred --ccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhcCCCCCCee-EEEECccchhhcc----chh
Confidence 13456777888889999999999999888888888765 3 24444443433222 2222111211110 111
Q ss_pred hhhhHHHHHHHHhcccE---EEeeeeeC------Cc-ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 422 GEITPILKGRMMQAGTM---MVGYQPLN------DL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 422 ~~~~~~i~~~l~~~g~~---~~~~~~~~------~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
-.+...|..+|+. .+.+.... .. ..++-++ .....++||||.++++|+++++
T Consensus 328 ----~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~A-saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 328 ----TFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAA-SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ----HHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEE-E-TT--HHHHHHHHHHHHHHHH
T ss_pred ----hhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHH-HHhCCCHHHHHHHHHHHHHHhC
Confidence 2455666666643 12211000 00 2688887 7889999999999999999864
No 363
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=1.3e-13 Score=132.15 Aligned_cols=225 Identities=16% Similarity=0.104 Sum_probs=157.0
Q ss_pred cChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH
Q psy12303 106 IAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA 185 (480)
Q Consensus 106 ~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~ 185 (480)
..|....+|+. ++.+=|... ++.+++|..|+..++.+... +|+ .|+++...|......+
T Consensus 61 ~nPT~~~lE~~----~a~LEg~~~--~~afsSGmaAI~~~~l~ll~--------------~GD-~vl~~~~~YG~t~~~~ 119 (396)
T COG0626 61 GNPTRDALEEA----LAELEGGED--AFAFSSGMAAISTALLALLK--------------AGD-HVLLPDDLYGGTYRLF 119 (396)
T ss_pred CCccHHHHHHH----HHHhhCCCc--EEEecCcHHHHHHHHHHhcC--------------CCC-EEEecCCccchHHHHH
Confidence 34655666655 666656544 89999999999988877764 556 5666665655555444
Q ss_pred HHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHH-HHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 186 AVC-GLGTDNCVEVPSDKRGRLIPSELERLVLE-RKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 186 ~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~-~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
... .....++.+++.. +.+++++++.+ + |++|.+..|+||+..+.||++|+++|+++|+.++||.++
T Consensus 120 ~~~l~~~gi~~~~~d~~-----~~~~~~~~~~~~~------tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTf 188 (396)
T COG0626 120 EKILQKFGVEVTFVDPG-----DDEALEAAIKEPN------TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTF 188 (396)
T ss_pred HHHHHhcCeEEEEECCC-----ChHHHHHHhcccC------ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCc
Confidence 332 1111166666543 55667777764 4 999999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+.+.+.-|. .+ ++|+++-|.-|++++--. .|.++.+++...+........+
T Consensus 189 atP~~q~PL-~~-------GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~------------------- 241 (396)
T COG0626 189 ATPVLQRPL-EL-------GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRAN------------------- 241 (396)
T ss_pred ccccccChh-hc-------CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhh-------------------
Confidence 988764332 33 899999999999997543 3544434444333221000000
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.|.......+|+.++. .+.+.-+.+++.+++..+.+.|++ .|.++-+.
T Consensus 242 -~G~~l~p~dA~l~lRG--lkTL~~Rm~~~~~nA~~IA~~L~~-~p~V~~V~ 289 (396)
T COG0626 242 -TGAVLSPFDAWLLLRG--LRTLALRMERHNENALKIAEFLAD-HPKVKKVY 289 (396)
T ss_pred -cCCCCCHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 1222355677887764 677888999999999999999999 89887543
No 364
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.64 E-value=1.6e-13 Score=131.60 Aligned_cols=347 Identities=15% Similarity=0.173 Sum_probs=195.4
Q ss_pred CCccccccCCCCh-HHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDV-VSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARH 151 (480)
Q Consensus 73 p~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~ 151 (480)
--|.+..+.+.+- ++ .++.++.+. ....|..+|.+..+|+. ++++||.+. +++|.+|+.++..+..+...
T Consensus 41 dV~IDLrSDTgT~apS--~~m~aAM~~-GDD~Y~gdpSv~~Lee~----vael~G~E~--alpthqGRgaE~Il~~~~~~ 111 (467)
T TIGR02617 41 DVFIDLLTDSGTGAVT--QSMQAAMMR-GDEAYSGSRSYYALAES----VKNIFGYQY--TIPTHQGRGAEQIYIPVLIK 111 (467)
T ss_pred CeEEECccCCCCCCCC--HHHHHHHHc-CCcccccCchHHHHHHH----HHHHhCCce--EEECCCCchHHHHHHHhhcc
Confidence 3466665555441 21 122222222 44568888888888776 778889986 89999999999999887764
Q ss_pred hcCchhHhcCCCccCCceEE-------EecCCCchhH-HHHHHHcCCCCCCeEEee----------CCCCCCCCHHHHHH
Q psy12303 152 KMFPTYKEKGLSAIKGQLVM-------FTSDQCHYSV-RSCAAVCGLGTDNCVEVP----------SDKRGRLIPSELER 213 (480)
Q Consensus 152 ~~~~~~~~~g~~~~~g~~~v-------l~~~~~h~s~-~~~~~~~g~~~~~v~~v~----------~~~~~~~d~~~L~~ 213 (480)
. ||+ .+ +++...|+-. ...+.+.|. .++.++ ...+|.+|+++|++
T Consensus 112 ~-------------~g~-e~g~~~~~~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~ 174 (467)
T TIGR02617 112 K-------------REQ-EKGLDRSKMVAFSNYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_pred c-------------ccc-cccccccccccceEEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHH
Confidence 2 222 22 2334455543 345566666 333332 22368999999999
Q ss_pred HHHHHHHCCCccEEEEeccCCCc-cccc---cChHHHHHHHHHcCcEEEeecccccc-cccccc-----ccCc---cc-C
Q psy12303 214 LVLERKAKGDIPFFVNCTSGTTV-LGAF---DPIEEIADICQKYNMWLHVDAAWGGG-LLLSKK-----YRHP---RL-T 279 (480)
Q Consensus 214 ~i~~~~~~~~~~~~v~~~~~~~~-~G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~-~~~~~~-----~~~~---~~-~ 279 (480)
+|++....+ +.++..+..+|. -|.+ +++.++.++|++||+.+|.|||--.- +.+... ...+ .. .
T Consensus 175 ~I~~~g~~~--i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE 252 (467)
T TIGR02617 175 GIEEVGPNN--VPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRE 252 (467)
T ss_pred HHhhcCCCC--ceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHH
Confidence 998642111 223333333333 3544 55789999999999999999976442 211100 0000 00 1
Q ss_pred CCCCCccceeCccccCCCcccceEEEEeCc---hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHH
Q psy12303 280 GIERADSVTWNPHKLMGTLLQCSTIHFKQD---GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQW 356 (480)
Q Consensus 280 ~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l 356 (480)
-.+.+|++++|+.|.+++|.| |++..++. ++...+......|- . ...||.. .||-..+++ ..|
T Consensus 253 ~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~E----G----f~tYGGl---agrd~ea~a--~Gl 318 (467)
T TIGR02617 253 TYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQE----G----FPTYGGL---EGGAMERLA--VGL 318 (467)
T ss_pred hhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhccccc----C----CcCcCch---hHHHHHHHH--hhh
Confidence 124899999999999999875 56666776 44444332222211 0 0111110 122112222 233
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEe----ecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 357 RAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWY----LPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 357 ~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~----~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
... .-..++++.....+||.+.|.+ .|+.++. .++.-+|.. .|.- . ..+ +- ...+...|
T Consensus 319 ~e~---~~~~yl~~ri~qv~yl~~~L~~--~Gvpi~~--~Gghav~iDa~~~lphi-p---~~~----fp--a~al~~~l 381 (467)
T TIGR02617 319 YDG---MNLDWLAYRINQVQYLVNGLEE--IGVVCQQ--AGGHAAFVDAGKLLPHI-P---ADQ----FP--AHALACEL 381 (467)
T ss_pred hhc---ccHHHHHHHHHHHHHHHHHHHh--CCCcEEe--cCccEEEEehhhhCCCC-C---hhh----Cc--HHHHHHHH
Confidence 321 2245667778889999999999 7998875 444444431 1211 1 001 10 12233333
Q ss_pred Hh-cc-------cEEEeeeeeCCc-----ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 433 MQ-AG-------TMMVGYQPLNDL-----PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 433 ~~-~g-------~~~~~~~~~~~~-----~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.. .| .+.....+..+. -..+|++++-..-|.+++|++++++..+.+
T Consensus 382 y~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 382 YKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred HHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 22 23 222221111111 257999988888899999999999998765
No 365
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.64 E-value=1.6e-13 Score=136.33 Aligned_cols=310 Identities=13% Similarity=0.072 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcC-------C----------CccCCceEEEec
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKG-------L----------SAIKGQLVMFTS 174 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g-------~----------~~~~g~~~vl~~ 174 (480)
++.+.+.+.+++++.-+-..+.|++|||+|+..|++.|+..... +.++ . ++.+...+|...
T Consensus 105 ~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~--~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~ 182 (464)
T TIGR00699 105 DWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRS--KQRGYQADFSEEENESCMDNQAPGSPDLSILSFK 182 (464)
T ss_pred HHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHh--cCCCcccccccccccccccccccCCcCCEEEEEC
Confidence 34444444344555422256999999999999999999864210 0000 0 000112355666
Q ss_pred CCCchhHHHHHHHcCCCC--------CCeEEeeCCC-CCC-------------CCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 175 DQCHYSVRSCAAVCGLGT--------DNCVEVPSDK-RGR-------------LIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 175 ~~~h~s~~~~~~~~g~~~--------~~v~~v~~~~-~~~-------------~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
...|.....+....+... ..+..+|... ... -+++.|++++++ .+..+++|+++.
T Consensus 183 ~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EP 259 (464)
T TIGR00699 183 GAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEP 259 (464)
T ss_pred CCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeC
Confidence 667877777776654310 1122333221 000 134556666653 223489999999
Q ss_pred CCCccccccC----hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC-CCccceeCccccCCCcccceEEEEe
Q psy12303 233 GTTVLGAFDP----IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE-RADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 233 ~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
.....|.+.| +++|.++|++||+++++|+++.|+......+.. ...|+. .+|++++ .|.+++ .|+++ .
T Consensus 260 v~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~-e~~gv~~~PDi~t~--gK~lg~---gG~~~-~ 332 (464)
T TIGR00699 260 IQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAH-EHWNLDDPPDMVTF--SKKFQT---AGYFF-H 332 (464)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHH-HhcCCCCCCCEEEe--hhhhcc---CCccc-c
Confidence 9988899887 999999999999999999999877554433333 334553 5899884 698852 12222 2
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM-- 385 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~-- 385 (480)
.. .+. ...+.+.. +++ .+.+....++.++|+.+-. .++.++..++.++|.+.|++.
T Consensus 333 ~~-~~~---~~~~~~~~------------~T~---~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~ 390 (464)
T TIGR00699 333 DP-AFR---PNKPYRQF------------NTW---MGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQK 390 (464)
T ss_pred ch-hcc---CCCCcccc------------cCC---CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 21 110 00000000 000 1111222333334444432 234556666666666666551
Q ss_pred -CCC-eEEec-CCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCC
Q psy12303 386 -PDK-FYLIL-EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVT 462 (480)
Q Consensus 386 -~~g-~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t 462 (480)
.|. +.-+. ...+.++.+.+. .. . ....+.+.+.++|.++... + .+.+|+. +...+|
T Consensus 391 ~~~~~i~~vRg~G~Glm~gie~~-~~-------~-------~~~~i~~~~~~~Gvl~~~~----g-~~~ir~~-Ppl~it 449 (464)
T TIGR00699 391 KYPEFIQNLRGKGRGTFIAWDTP-DE-------A-------KRDKLLKKARNNGVNIGGC----G-VKAIRLR-PMLVFQ 449 (464)
T ss_pred hCCCceeeecccCeEEEEEEecC-CH-------H-------HHHHHHHHHHHCCcEEecC----C-CCeEEEe-CCCCCC
Confidence 231 22221 133444444321 00 0 1246778888999554322 3 4789999 999999
Q ss_pred HHHHHHHHHHHHHh
Q psy12303 463 EGDIDFLLTEMDRL 476 (480)
Q Consensus 463 ~~di~~~~~~l~~~ 476 (480)
++||+.++++|++.
T Consensus 450 ~~eid~~~~~l~~~ 463 (464)
T TIGR00699 450 KHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 366
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.63 E-value=2.4e-13 Score=135.65 Aligned_cols=319 Identities=12% Similarity=0.090 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHhC-CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 112 LMETVVLEKMRQIIG-WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 112 ~~e~~~~~~la~~~g-~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
+...++.+.++++.+ -.-..+.|++|||||+..|++.||.........+|... ++ ..+|......|.....+....+
T Consensus 92 ~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~-~~r~kii~~~~~yHG~t~~als~~~ 170 (443)
T PRK08297 92 VEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDP-ALGTKVLHLRGAFHGRSGYTLSLTN 170 (443)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCC-CCCceEEEECCCcCCcchhhhhhcC
Confidence 334456666777662 22247999999999999999999864210000122200 11 2255555566777666665544
Q ss_pred CCCC-----C---eEEeeCCC-C----C-C---C------CHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----C
Q psy12303 190 LGTD-----N---CVEVPSDK-R----G-R---L------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----P 242 (480)
Q Consensus 190 ~~~~-----~---v~~v~~~~-~----~-~---~------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~ 242 (480)
.... . ...+|... . . . . +++++++.+.+ .+..+++|+++..+...|.+. -
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~y 247 (443)
T PRK08297 171 TDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEF 247 (443)
T ss_pred CcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHH
Confidence 2100 0 00111100 0 0 0 0 23444555543 234589999999988888873 3
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
+++|.++|++||+++++|+++.|+......+.+ ...++ .+|+++ +.|.+. .|.++++++ ...... ..
T Consensus 248 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~-~~~gv-~PDiv~--~gK~l~----~~a~l~~~~-i~~~~~----~~ 314 (443)
T PRK08297 248 FAAMRELCDEHDALLIFDEVQTGVGLTGTAWAY-QQLGV-RPDIVA--FGKKTQ----VCGIMAGRR-VDEVED----NV 314 (443)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCccchHHHH-HhcCC-CCCEEE--eccccc----ccceecchH-HHHhhh----hh
Confidence 899999999999999999999876543333222 23345 689998 468863 344444432 111100 00
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVN 399 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~ 399 (480)
+.... ...+++ .+.+....++.+++..+.. ++..++..++.++|.+.|++. .+.+..-....+.+
T Consensus 315 ~~~~~------~~~~T~---~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~ 382 (443)
T PRK08297 315 FAVSS------RINSTW---GGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLM 382 (443)
T ss_pred ccCcc------ccCCCC---CccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceE
Confidence 00000 000111 1111222233333444332 245566677777777766541 23331001233444
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.+... . ....+.+.+.++|.++... + .+.+|++ ++..+|++||+++++.|++.+++
T Consensus 383 ~~i~~~~~--------~-------~~~~~~~~l~~~Gvl~~~~----~-~~~lr~~-P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 383 CAFDLPTT--------A-------DRDEVIRRLWEEGVLVLPC----G-ERSIRFR-PALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred EEEEecCH--------H-------HHHHHHHHHHHCCEEEecC----C-CCeEEEE-CCccCCHHHHHHHHHHHHHHHHh
Confidence 44443210 0 1245778888888554321 2 3689998 88999999999999999998765
Q ss_pred C
Q psy12303 480 L 480 (480)
Q Consensus 480 l 480 (480)
+
T Consensus 442 ~ 442 (443)
T PRK08297 442 V 442 (443)
T ss_pred h
Confidence 3
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.62 E-value=6.2e-13 Score=132.61 Aligned_cols=310 Identities=12% Similarity=0.108 Sum_probs=165.3
Q ss_pred HHHHHHHHHhCC-CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC-
Q psy12303 116 VVLEKMRQIIGW-QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD- 193 (480)
Q Consensus 116 ~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~- 193 (480)
++.+.++++.+. .-..+.|++|||+|+..|++.||.......+.+|.+...++.+|-.....|.....+....|....
T Consensus 89 ~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~ 168 (431)
T TIGR03251 89 RFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRK 168 (431)
T ss_pred HHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCcccc
Confidence 445556666422 124689999999999999999986411000112321100133555666677776666655442100
Q ss_pred ----Ce---EEe--e-----CCCCC-C-------CCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHH
Q psy12303 194 ----NC---VEV--P-----SDKRG-R-------LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIA 247 (480)
Q Consensus 194 ----~v---~~v--~-----~~~~~-~-------~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~ 247 (480)
.. ..+ | .+... . -+++++++.++. .+..+++|+++..+...|.+. .+++|.
T Consensus 169 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~ 245 (431)
T TIGR03251 169 TARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMR 245 (431)
T ss_pred ccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHH
Confidence 00 001 1 11000 0 012334444432 234589999999988888874 389999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc--hhhHhhhcCCcccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD--GLLISCNQMSAEYLFM 325 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~--~~~~~~~~~~~~~l~~ 325 (480)
++|++||+.+++|++++++......+.. ...++ .+|++++ .|.+ | .+|++ .+++ ........ .....
T Consensus 246 ~lc~~~g~llI~DEV~tG~GrtG~~~a~-~~~gv-~PDi~~~--gK~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~-- 314 (431)
T TIGR03251 246 ALCDEHDALLIFDEVQTGVGLTGTAWAY-QQLGV-QPDIVAF--GKKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRL-- 314 (431)
T ss_pred HHHHHcCCEEEEecchhccCccchHHHH-HhcCC-CCCEEEe--cccC--c-cceEE-ecchHHHhhhhccc-Ccccc--
Confidence 9999999999999999976554332222 23455 6899985 4664 2 23444 4432 11110000 00000
Q ss_pred cccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEE
Q psy12303 326 QDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSF 402 (480)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f 402 (480)
.+++ ++.+....++.++|+.+..++ ..++..++.++|.+.|++. .+++..-......++.+
T Consensus 315 ----------~~T~---~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i 378 (431)
T TIGR03251 315 ----------NSTW---GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAF 378 (431)
T ss_pred ----------CCCC---CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEE
Confidence 0011 122223334444455443333 3344455555555554430 33232211222333344
Q ss_pred EeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 403 WYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.+ . + ....+.+.+.++|.++... + .+.+|++ ++..+|++||++++++|+++
T Consensus 379 ~~~~-~-------~-------~~~~~~~~l~~~Gvl~~~~----g-~~~lr~~-P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 379 DLPS-T-------A-------DRDEVIRQLYREGVLLLGC----G-ERSIRFR-PPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred EeCC-H-------H-------HHHHHHHHHHhCCeEEecC----C-CCeEEEE-CCccCCHHHHHHHHHHHHhC
Confidence 3311 0 0 1245778888888554322 2 3679999 99999999999999999763
No 368
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=7.9e-13 Score=130.04 Aligned_cols=233 Identities=20% Similarity=0.231 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.+..+..|+.||.+. .-++++|+|.||...+.+... ||+ .|+++..+|-|+..+..+.|+ .
T Consensus 73 ~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~~--------------~GD-~VLvdRN~HKSi~~glilaGa---~ 133 (557)
T COG1982 73 KEAQELAARVFGADH-TYFVVNGTSTANKAVINAVLT--------------PGD-KVLVDRNCHKSIHHGLILAGA---T 133 (557)
T ss_pred HHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhcC--------------CCC-EEEecCCccHHHHHHHHHcCC---c
Confidence 456678999999986 467888888999988888765 556 899999999999999888887 3
Q ss_pred eEEe-eC-CC----CCCCCHHHHHHHHHHHHHCCCcc-EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 195 CVEV-PS-DK----RGRLIPSELERLVLERKAKGDIP-FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 195 v~~v-~~-~~----~~~~d~~~L~~~i~~~~~~~~~~-~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
-+++ |. |+ -+.++.+.+++++.+... . +++++++| |..|.+.++++|.+.+.++++|+.+|++++...
T Consensus 134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~----~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~ 208 (557)
T COG1982 134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPD----AEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHF 208 (557)
T ss_pred eEEecCCCCccccccCCCCHHHHHHHHHhChh----hheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccc
Confidence 3444 33 33 257899999998877643 3 78999999 778999999999999999999999999999877
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc-----hhhHhhh----cCCcccccccccccCcccCCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD-----GLLISCN----QMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~-----~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
-..+.... ..--.++|+++-|.||.+++-..++.+.+++. +.+..+. +.+|.|..
T Consensus 209 ~~~~~l~~--~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l-------------- 272 (557)
T COG1982 209 DFSPMLPE--SALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPL-------------- 272 (557)
T ss_pred cccccCcc--hhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHH--------------
Confidence 66554322 11113789999999999998778888888873 1111111 11111110
Q ss_pred ccccCCCCCCchHHHHH-HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 339 KVIQCGRHNDIFKLWLQ-WRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~-l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
++++.+... +...|..-.++.+++..+.++.+++...+ ++++.++.++.
T Consensus 273 --------~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~-~~~~~~~~~~~ 322 (557)
T COG1982 273 --------MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINE-IGFFPVLQPEK 322 (557)
T ss_pred --------HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-cCCeeeccccc
Confidence 133333211 12235555566688899999999999999 88898887653
No 369
>KOG0053|consensus
Probab=99.56 E-value=4.5e-13 Score=126.58 Aligned_cols=218 Identities=18% Similarity=0.168 Sum_probs=157.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH-
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA- 186 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~- 186 (480)
|....+|. .++.+-|.+. ++.+++|..|...++..... +|+ .|++....|......++
T Consensus 77 Pt~~~le~----~iaal~ga~~--~l~fsSGmaA~~~al~~L~~--------------~g~-~iV~~~~~Y~gT~~~l~~ 135 (409)
T KOG0053|consen 77 PTRDVLES----GIAALEGAAH--ALLFSSGMAAITVALLHLLP--------------AGD-HIVATGDVYGGTLRILRK 135 (409)
T ss_pred CchHHHHH----HHHHHhCCce--EEEecccHHHHHHHHHHhcC--------------CCC-cEEEeCCCcccHHHHHHH
Confidence 44444444 4888888876 88889999888888887764 335 55555555555444443
Q ss_pred ---HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 187 ---VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 187 ---~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.+|+ +...+..+ +++.++++++++ +.+|.+..|+||++.+.||++|+++|+++|+.++||.+.
T Consensus 136 ~~~~~gi---e~~~vd~~-----~~~~~~~~i~~~------t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf 201 (409)
T KOG0053|consen 136 FLPKFGG---EGDFVDVD-----DLKKILKAIKEN------TKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTF 201 (409)
T ss_pred HHHHhCc---eeeeechh-----hHHHHHHhhccC------ceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCc
Confidence 3455 55666655 778888888875 999999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+.+ +..+...+ +||+++.|.-||+++--. .|.++.+..++........ .+
T Consensus 202 ~~p-~~~~pL~l-------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~------------------- 253 (409)
T KOG0053|consen 202 GSP-YNQDPLPL-------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-ED------------------- 253 (409)
T ss_pred Ccc-cccChhhc-------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HH-------------------
Confidence 988 44555555 899999999999997533 4666655455444332111 11
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
++...+++.+|..++. .+.+.-+++++.+++..+.+.|++ .|.++-+
T Consensus 254 -lg~~~~p~~~~ll~Rg--lktl~lRi~~~~ena~~~A~~Le~-~~~v~kv 300 (409)
T KOG0053|consen 254 -LGWCEDPFDLFLLSRG--LKTLHLRINKHSENALKIALLLEA-HPKVKKV 300 (409)
T ss_pred -hcCCCCHHHHHHHhcC--cchhhhhHHHHHHHHHHHHHHhhh-CCceeEE
Confidence 2222466777777665 455666788888899899999998 7777643
No 370
>KOG0633|consensus
Probab=99.56 E-value=1.7e-13 Score=119.24 Aligned_cols=288 Identities=12% Similarity=0.023 Sum_probs=184.7
Q ss_pred hCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCC
Q psy12303 125 IGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRG 204 (480)
Q Consensus 125 ~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~ 204 (480)
-+..++++++..|+.|.+-..+++.+. ||+..|+.-.+++..+.-.+.+-++ +|+.+|.++++
T Consensus 82 kpLt~dnic~GvGsDE~ID~iiR~~c~--------------PGkeKIl~cPPtysMY~v~A~iNd~---eVvkvpl~pdF 144 (375)
T KOG0633|consen 82 KPLTSDNICVGVGSDELIDLIIRCVCD--------------PGKEKILDCPPTYSMYVVDAAINDA---EVVKVPLNPDF 144 (375)
T ss_pred CCCCccceEEecCcHHHHHHHHhheec--------------CCccceeecCCcceeEEEEeecCCc---eEEEecCCCCc
Confidence 345567899999999999999888875 7777888888887666555566666 89999999999
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc-CcEEEeeccccccccccccccCcccCCCCC
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY-NMWLHVDAAWGGGLLLSKKYRHPRLTGIER 283 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~-~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 283 (480)
.++.+++.+.++.+. .++++++|.|.||+|.+-..+.|.+|.+.- |..++||+||--+.-. ..+.+++.. .
T Consensus 145 ~lnvdai~evl~~ds----~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~--~S~~~lV~k--Y 216 (375)
T KOG0633|consen 145 SLNVDAIAEVLELDS----KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGV--ESRMKLVKK--Y 216 (375)
T ss_pred cccHHHHHHHHhccc----cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccc--cccchHhHh--C
Confidence 999999999998763 389999999999999998888888887754 7899999999765442 222212222 1
Q ss_pred Ccc-ceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH
Q psy12303 284 ADS-VTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD 361 (480)
Q Consensus 284 ~D~-~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~ 361 (480)
... +.-.++|.+|. +...|.-++ ...+.+......++|.... ..+..+..++.--..
T Consensus 217 pNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~--------------------~~s~~AL~Als~~n~ 275 (375)
T KOG0633|consen 217 PNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISV--------------------AGSVAALAALSDSNG 275 (375)
T ss_pred CceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccc--------------------hhHHHHHHhcCcccc
Confidence 222 33356777764 234555443 3344445555566665332 112222333322234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe-cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH-HHHHHhcccEE
Q psy12303 362 EGFEKQIDRLMELAEYMVKKIKSMPDKFYLI-LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL-KGRMMQAGTMM 439 (480)
Q Consensus 362 ~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i-~~~l~~~g~~~ 439 (480)
+.++...+...+-+.+|...|.+ .|++.-+ +....+.+..+..... .+ + .+.+ ++.+...|.++
T Consensus 276 kkme~~rdaiv~er~RL~keLt~-v~~~~~~~gg~daNFiLi~v~~~~-n~---------~---akkly~q~at~~gVvV 341 (375)
T KOG0633|consen 276 KKMEDVRDAIVRERERLFKELTE-VPFLNDYPGGSDANFILIEVTGGD-NG---------M---AKKLYKQDATKMGVVV 341 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhc-CccccCCCCcccccEEEEEEcCCC-cH---------H---HHHHHHHHHHhcceEE
Confidence 55666667777778888899998 8877532 3344444444433221 11 1 2333 44455666444
Q ss_pred EeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 440 VGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 440 ~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.-.+...+-.+++|+++. |+|+=+.+++.+++.
T Consensus 342 Rfrgse~~c~G~lRitvG----t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 342 RFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF 374 (375)
T ss_pred EEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence 434333333689999954 456666778877764
No 371
>KOG0258|consensus
Probab=99.56 E-value=8e-12 Score=115.09 Aligned_cols=327 Identities=13% Similarity=0.040 Sum_probs=196.0
Q ss_pred cCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec
Q psy12303 97 ANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS 174 (480)
Q Consensus 97 ~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~ 174 (480)
...+.+.|+.|.+..-+.+.+++.+.+.=|. ++.++++|+|+|.|+.+.|...... + ..-|+++
T Consensus 102 ~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-------------~-~~GvliP 167 (475)
T KOG0258|consen 102 CGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-------------K-KTGVLIP 167 (475)
T ss_pred cCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-------------C-CCceEee
Confidence 3346788889999999999999999888785 3578999999999999999888753 2 2368888
Q ss_pred CCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHH
Q psy12303 175 DQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQ 251 (480)
Q Consensus 175 ~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~ 251 (480)
-+.|+-+...+..+|..... .+..-..+|.+|.++|++.+++.+ ++..|+++++.+|-||||.+ ..+++|..+|+
T Consensus 168 iPQYPLYsAti~l~~~~~v~-YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~ 245 (475)
T KOG0258|consen 168 IPQYPLYSATISLLGGTQVP-YYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAA 245 (475)
T ss_pred cCCCchhHHHHHHhCCcccc-eeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence 88898887788888763211 233444579999999999999988 78888888888888999988 56999999999
Q ss_pred HcCcEEEeeccccccccccc-cc---cCcc--cC-CC-CCCcccee-CccccCCC--cccceEEEEeCc--hhhHh----
Q psy12303 252 KYNMWLHVDAAWGGGLLLSK-KY---RHPR--LT-GI-ERADSVTW-NPHKLMGT--LLQCSTIHFKQD--GLLIS---- 314 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~-~~---~~~~--~~-~~-~~~D~~~~-s~hK~~~~--p~~~g~~~~~~~--~~~~~---- 314 (480)
++++.++.|++|---.+.-. .+ +--+ +. -. ..+-.+++ |.||...+ +...|.+=+-+. +....
T Consensus 246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl 325 (475)
T KOG0258|consen 246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL 325 (475)
T ss_pred HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence 99999999998876554221 00 0000 00 00 12223333 44555543 223343322222 11111
Q ss_pred hhcCCcccccccccc--cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 315 CNQMSAEYLFMQDKL--YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
......+-..++-.. .-..+-+++ .+...+.. .-+.+.......++.+.+.+++ ++|+..
T Consensus 326 ~si~lc~~V~GQ~~vdl~VnPP~Pgd---------~Sy~~~~~-------Ekd~il~~l~~ra~l~~~~~ns-~~gi~c- 387 (475)
T KOG0258|consen 326 ASIKLCPQVSGQKLVDLVVNPPKPGD---------PSYDLFSS-------EKDGILSSLRSRAKLTEDAFNS-LEGISC- 387 (475)
T ss_pred HhhhhcCCccchhhhceecCCCCCCC---------cchhhhhh-------hhHhHHHHHHHHhHHHHHHHhh-cCceee-
Confidence 000001111110000 000001111 12222222 2244556777888899999999 999998
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH--HHHHhcccEEEeeeeeCCc--ccEEEEecccCC
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK--GRMMQAGTMMVGYQPLNDL--PNFFRNIISSAA 460 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~--~~l~~~g~~~~~~~~~~~~--~~~~R~~~~~~~ 460 (480)
.++++.++.|.-+.-..+.. +..+.+....+.++ +.|...|++.|+.+++..+ ...+|.+|....
T Consensus 388 n~~qGAMY~fP~i~lP~kai---e~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 388 NPVQGAMYLFPQISLPPKAI---EAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred ccCccceeecccccCCHHHH---HHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 68999999884332111100 11112221223332 3455566555544443322 457999976554
No 372
>KOG3846|consensus
Probab=99.53 E-value=1.2e-12 Score=116.55 Aligned_cols=319 Identities=15% Similarity=0.165 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec----CCCchhHHHHHHHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS----DQCHYSVRSCAAVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~----~~~h~s~~~~~~~~g 189 (480)
.+-+...++.++|+.+.++.+.++-|. |+..++...-+ |.-+ +..|+.- ...||.++..+++.|
T Consensus 113 De~il~l~~~iVGA~e~EvavmNsLTv-Nlh~Ll~sFyK--PTek---------R~KILlE~kaFPSDhYAiesQ~~lhG 180 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQENEVAVMNSLTV-NLHSLLISFYK--PTEK---------RFKILLEKKAFPSDHYAIESQCKLHG 180 (465)
T ss_pred chhhhhhhhhhccCCchhhhhHhhhhh-HHHHHHHHhcC--Ccch---------hhhhhhccCCCCchHHHHHhhhhhcC
Confidence 345678899999998877777776654 54444433221 1111 2234433 236888999999999
Q ss_pred CCCC-CeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 190 LGTD-NCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 190 ~~~~-~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
+... .++.+...+ +-.+..+++-+.|+.+ |...++|+++..+..||...++.+|...-+..|+++-.|-||+.+-
T Consensus 181 ~~~e~sm~~iePREGEetlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgN 257 (465)
T KOG3846|consen 181 ISPENSMIQIEPREGEETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGN 257 (465)
T ss_pred CChHHheEEecccccccchhHHHHHHHHHhc---CCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcC
Confidence 8643 344454433 3467788888887765 5558999999999999999999999988888899999999999999
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccc---cC--cccCCCCccc
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKL---YD--VRYDTGDKVI 341 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~--~~~~~~~~~~ 341 (480)
.+.....| ++|+.|+..+|+++++ .|.|.+++.++.. ........+|..+.... .+ ....+|..++
T Consensus 258 VpL~LHdW-------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~Gf 329 (465)
T KOG3846|consen 258 VPLQLHDW-------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGALGF 329 (465)
T ss_pred CceEEeec-------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCcccccc
Confidence 98888888 9999999999999865 5678888776532 22222234444332111 01 1223333333
Q ss_pred cCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-----------EecCC----ceeEEEEEe
Q psy12303 342 QCGRHN--DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY-----------LILEP----EMVNVSFWY 404 (480)
Q Consensus 342 ~~~r~~--~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~-----------~~~~~----~~~~v~f~~ 404 (480)
..+.+. ...++..+|+.+.+..+.++.++..-+..||...++. ..|.. ++.+. .+......|
T Consensus 330 RiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~-~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~F 408 (465)
T KOG3846|consen 330 RISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA-SKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYF 408 (465)
T ss_pred ccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH-hcccCchhhhcceeEEEeCCcccccccceEEEEe
Confidence 333332 4556677788787888899999999999999888876 44432 22111 111222211
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. .-+..+++.|.++|.+. .. .. ++.+|+.-.+.++|-.||..++++|.+++.
T Consensus 409 s-----------------sp~~~vfqeL~krGv~~-Dk---R~-PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d 460 (465)
T KOG3846|consen 409 S-----------------SPTPKVFQELHKRGVIG-DK---RR-PNVIRVAPVPLYNTFSDVYIFVNALNEAMD 460 (465)
T ss_pred C-----------------CCchHHHHHHHHcCeec-cc---cC-CCceEeecchhhccHHHHHHHHHHHHHHHH
Confidence 1 11357889999999432 21 12 789999967889999999999999998764
No 373
>KOG1401|consensus
Probab=99.52 E-value=1.2e-11 Score=115.06 Aligned_cols=229 Identities=16% Similarity=0.108 Sum_probs=147.9
Q ss_pred HHHHHHhCC-CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC-----
Q psy12303 119 EKMRQIIGW-QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT----- 192 (480)
Q Consensus 119 ~~la~~~g~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~----- 192 (480)
+.+.+.++- ....+.|+++||+||+.||+.||.....+.... . -..|......|.-...++...+...
T Consensus 105 ~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~-----~-t~~Iaf~nsyHG~tlgals~~~~s~y~~~~ 178 (433)
T KOG1401|consen 105 EVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEK-----K-TKFIAFENSYHGRTLGALSVTGNSKYGLPF 178 (433)
T ss_pred HHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCcc-----c-eeEEEEecCcCCcchhHHHhhcccccCCCC
Confidence 334444432 235699999999999999999997532211000 0 1156666777877666666443211
Q ss_pred ----CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEeecccc
Q psy12303 193 ----DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 193 ----~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
..++..+.+ |+.+|++.++..+.. +.+|++...+..-|.+.. +..|..+|+++|+.+|.|+++.
T Consensus 179 ~p~~p~v~~~~yn-----d~t~l~k~~~~h~~~---IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t 250 (433)
T KOG1401|consen 179 DPIAPDVVTAEYN-----DSTALEKLFESHKGE---IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT 250 (433)
T ss_pred CCCCCceeecccC-----CHHHHHHHHHhCCCc---eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh
Confidence 122233333 789999999876422 789999999887777633 7899999999999999999999
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
|.....+.+.+ .+.++ ..|+.| .-|.++++.+.|+..+++. ..+......+ +.+.. +
T Consensus 251 G~gR~g~~~a~-e~~~~-~PDI~t--~aK~L~gGlPigA~~v~~k-V~~~i~~~~~--l~hg~----------------T 307 (433)
T KOG1401|consen 251 GLGRLGYGWAQ-EYFGV-TPDITT--VAKPLGGGLPIGATGVRDK-VAEMISPGDH--LYHGG----------------T 307 (433)
T ss_pred CccccchHHHH-HHhCc-CCccee--ehhhccCCceeEEEeehHH-HHhhcCCCCc--cccCc----------------c
Confidence 98777776666 55555 789998 6699999899999998764 3333222222 21110 1
Q ss_pred CCCCchHH---HHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 345 RHNDIFKL---WLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 345 r~~~~l~~---~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
-..++++. ..++..+. .+.+.+.-+....+++.+.+.+.+
T Consensus 308 f~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 308 FSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred cCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11233333 33444443 344555555666677777777777
No 374
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.51 E-value=3.6e-12 Score=127.12 Aligned_cols=302 Identities=14% Similarity=0.074 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec--CCCchh--HHHHHHH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS--DQCHYS--VRSCAAV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~--~~~h~s--~~~~~~~ 187 (480)
..+.++.+.+++++... ..+.|+++||+|+..|++.||.. .| +..|+.. ...|.. +......
T Consensus 88 ~~~~~la~~l~~~~p~~-~~v~f~~sGseA~e~AlklAr~~-------tg------r~~i~~~~~~~~h~~~~~~~g~~~ 153 (431)
T PRK06209 88 AIELDAAESFLELIDGA-DMVKFCKNGSDATSAAVRLARAY-------TG------RDLVARCADHPFFSTDDWFIGTTP 153 (431)
T ss_pred HHHHHHHHHHHHhCCcc-ceEEEecCHHHHHHHHHHHHHHH-------hC------CCeEEEeccCccccccccccccCC
Confidence 44556778888887421 46999999999999999999875 22 3244443 112210 0000000
Q ss_pred c--CCCC---CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 188 C--GLGT---DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 188 ~--g~~~---~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
. |... ..+..++.+ |+++|++++++. +..+++|++.......+....+++|.++|++||+++++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv 225 (431)
T PRK06209 154 MSAGIPASVSALTVTFRYN-----DIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEM 225 (431)
T ss_pred CCCCCChhHhccccccCCC-----CHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 0 1100 011122222 789999988642 23477888877655434444599999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhh-h-cC-Cc-ccccccccccCcccCCCC
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISC-N-QM-SA-EYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~-~-~~-~~-~~l~~~~~~~~~~~~~~~ 338 (480)
+.+..... .... ...++ .+|+++ +.|.++++++.|.+..++ ++.... . .. .+ .++...
T Consensus 226 ~tG~~~~~-~g~~-~~~gv-~PDi~t--~gK~lggG~p~~av~~~~-~i~~~~~~~~~~~~~~~~~~~------------ 287 (431)
T PRK06209 226 ITGFRWHM-RGAQ-KLYGI-VPDLSC--FGKALGNGFAVSALAGKR-EYMELGGLEHTDRERVFLLST------------ 287 (431)
T ss_pred cccCCcCc-chhh-HHhCC-Ccceee--ehhhhcCCcccEEEEEHH-HHHhhhcccccCCCCceeecc------------
Confidence 97654321 1001 12344 578877 579999877788887653 333321 0 00 00 111110
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccCCCchh
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHE 415 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~ 415 (480)
++ .+.+....++.++++.+..++ ..++..++.++|.+.|++ . .++..........+.+.+......+...
T Consensus 288 -T~-~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~-~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~- 360 (431)
T PRK06209 288 -TH-GAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNE-AAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPS- 360 (431)
T ss_pred -CC-CCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHH-HHHhCCCCeEEEeecceEEEEEecCCcccCCc-
Confidence 00 111122334444555543332 345555555566555543 1 1222100101111222111111000000
Q ss_pred hHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 416 KRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 416 ~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+ ...+.+.+.+.|.++ . .++ ++..+|++||+++++++++.+++
T Consensus 361 ---~~~---~~~~~~~l~~~Gi~~-p---------~l~---is~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 361 ---QAF---RTLFLQETIRRGVLM-P---------SLV---VSYAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred ---HHH---HHHHHHHHHHCCccc-c---------ccc---ccccCCHHHHHHHHHHHHHHHHH
Confidence 111 235667888888543 1 133 34678999999999999987653
No 375
>KOG1358|consensus
Probab=99.51 E-value=2.1e-12 Score=118.94 Aligned_cols=308 Identities=15% Similarity=0.149 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.++|.. +++++|++. .++.+-|-.++..++.+...+ || +|++.+..+..+.++.+...-
T Consensus 142 ldlE~~----iakF~G~E~--aivYs~gF~ti~S~ipafsKr--------------GD-Ii~~de~~nfaIq~GlqlSRS 200 (467)
T KOG1358|consen 142 LDLEKR----IAKFMGTED--AIVYSYGFSTIESAIPAFSKR--------------GD-IIFVDEAVNFAIQKGLQLSRS 200 (467)
T ss_pred cccHHH----HHHhhCCcc--eeeeccccchhhhcchhhhcc--------------Cc-EEEEehhhhHHHHHHHhhhhh
Confidence 445554 999999976 566666666777778777653 35 899999999999999888765
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHH----HCCC---ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERK----AKGD---IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~----~~~~---~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.+.+...+ |.++|+..+.+.. ++.+ .-++|++....-++|.+.|+.+|.++..+|...+++|+.+
T Consensus 201 ---~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~ 272 (467)
T KOG1358|consen 201 ---TISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESL 272 (467)
T ss_pred ---eeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccc
Confidence 66777665 7888877664332 2222 1367899999999999999999999999999999999999
Q ss_pred ccccccccc---ccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 264 GGGLLLSKK---YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 264 ~~~~~~~~~---~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
+.|.+.... ..+ .--+++.+|.++.+..-.++. .|++++.+......-.-....|.+.
T Consensus 273 SfG~lg~~GrGvteH-~~v~~~~iDiv~~sm~~alas---~GgFc~G~~~i~~hQrLSg~~Y~fS--------------- 333 (467)
T KOG1358|consen 273 SFGVLGKTGRGVTEH-FGVPITDIDIVTASMETALAS---GGGFCAGKSFIADHQRLSGSGYCFS--------------- 333 (467)
T ss_pred ccccccccCcccccc-CCCCccceeeeeecccccccc---cCceeecceeeEeeeeccccceeee---------------
Confidence 988763211 111 112245789999887766654 4455555432221111112233322
Q ss_pred ccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 341 IQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
+...+.-+-++.+.+- .+.-.++.+..+..+..+.+.|.. ..++.+.+.+.+.++-..+.+....- ++...
T Consensus 334 ----AslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~-~s~~~v~~~~~SPi~hl~l~~~~~s~---e~e~~ 405 (467)
T KOG1358|consen 334 ----ASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSS-NSGFIVSGSPESPIIHLQLERSYGSR---EKEEK 405 (467)
T ss_pred ----ccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhc-CCceEEecCcCCceeeeeecccccch---HHHHH
Confidence 1111111222222211 223344666777788888899988 78899988888888877665433211 11112
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeC-----CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLN-----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~-----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. .+++..+.+.++..++.-.... ..+..+|+| ++..+++++|+++++.|++....
T Consensus 406 l----L~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~-~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 406 L----LEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC-VSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred H----HHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE-EeCCCCHHHHHHHHHHHHHHHHh
Confidence 2 2466777777765443321111 114589999 89999999999999999987643
No 376
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.48 E-value=5.5e-11 Score=125.30 Aligned_cols=329 Identities=12% Similarity=-0.015 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc---------cCCce-EEEecCCCchh
Q psy12303 112 LMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA---------IKGQL-VMFTSDQCHYS 180 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~---------~~g~~-~vl~~~~~h~s 180 (480)
+...++.+.|.+..+-+ -..++|+++||+|+..||++|+... ....|... .+++. .|-.....|..
T Consensus 409 epa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y---~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~ 485 (817)
T PLN02974 409 EPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKF---IVDHGFLENSGNEKRGGDLIELKVLALDGSYHGD 485 (817)
T ss_pred HHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHH---HHhcCCCcccccccccccCCCCEEEEECCCcCCC
Confidence 33345666666654322 2469999999999999999996522 11123210 01232 44455566777
Q ss_pred HHHHHHHcCCC--------CC---CeEEeeCC--------------CCCC----------------CC------------
Q psy12303 181 VRSCAAVCGLG--------TD---NCVEVPSD--------------KRGR----------------LI------------ 207 (480)
Q Consensus 181 ~~~~~~~~g~~--------~~---~v~~v~~~--------------~~~~----------------~d------------ 207 (480)
...++...|.. .. ...+++.. ..++ .|
T Consensus 486 T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~ 565 (817)
T PLN02974 486 TLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAY 565 (817)
T ss_pred CHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHH
Confidence 77777665421 00 01111100 0000 00
Q ss_pred HHHHHHHHHHHH--HCCCccEEEEeccC-CCccccccC----hHHHHHHHHHcCcEEEeeccccccccccccccCcccCC
Q psy12303 208 PSELERLVLERK--AKGDIPFFVNCTSG-TTVLGAFDP----IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTG 280 (480)
Q Consensus 208 ~~~L~~~i~~~~--~~~~~~~~v~~~~~-~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 280 (480)
.+.+++.|++.. ..+.++++|+++.. +...|.+.| +++|.++|++||+++|+|+++.|+......+.. ...|
T Consensus 566 ~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~-e~~g 644 (817)
T PLN02974 566 RSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAW-ELLG 644 (817)
T ss_pred HHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhH-HhcC
Confidence 144556664321 12355888998884 566687754 899999999999999999999999776665555 5556
Q ss_pred CCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC-cccccccccccCcccCCCCccccCCCCCCchHHHHHHHH
Q psy12303 281 IERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS-AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRA 358 (480)
Q Consensus 281 ~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~ 358 (480)
+ ..|+++ ..|.++++ .+.|+++++++ +.+...... ...+.+. .++ .+.+....++.++|+.
T Consensus 645 v-~PDIi~--~gKgLtgG~~Plaa~l~~~~-I~~~f~~~~~~~~~~hg----------~Ty---~gnpl~cAaala~L~~ 707 (817)
T PLN02974 645 C-KPDIAC--YAKLLTGGLVPLAATLATEE-VFEAFRGPSKLDALLHG----------HSY---TAHPMGCAAAAKALQW 707 (817)
T ss_pred C-CCCEEe--ecccccCCCCccEEEEEcHH-HHHhhccccccCCcccC----------CCC---CcCHHHHHHHHHHHHH
Confidence 6 699999 55999988 48999887643 333221100 0011110 000 1112233333344444
Q ss_pred hcHH-HHHHHHHHHHHHHHHHHHHH----hcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH
Q psy12303 359 KGDE-GFEKQIDRLMELAEYMVKKI----KSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM 433 (480)
Q Consensus 359 ~g~~-~~~~~~~~~~~l~~~l~~~l----~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~ 433 (480)
+-.+ -++...++..++.+++.+.| .+ +|.+.=+ .-.+.++.+.+...... . .+. ......+.+++.
T Consensus 708 ~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~-~p~V~~V-Rg~Gl~~~iel~~~~~~-~---~~~---~~~a~~v~~~~~ 778 (817)
T PLN02974 708 YKDPSTNPNLIPPGSRLRELWDEELVRAISS-LPNVERV-VSLGTVLALELDAEGSG-S---GYS---SLYARSVVRRLR 778 (817)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEE-EeeeeEEEEEEecCCcc-c---ccc---hHHHHHHHHHHH
Confidence 4332 22344455555555555544 44 4443222 12233344444322100 0 000 012356777788
Q ss_pred -hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 434 -QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 434 -~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.|.++... .+.+|+. +.+.+++++++++++.|.+.+
T Consensus 779 ~~~Gl~~r~~------Gnvi~l~-pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 779 REDGIYARPL------GNVVYLM-CGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HhCCEEEEec------CCEEEEe-CCCCCCHHHHHHHHHHHHHHh
Confidence 788554322 3689988 899999999999999998764
No 377
>KOG0630|consensus
Probab=99.44 E-value=6.1e-12 Score=118.80 Aligned_cols=260 Identities=17% Similarity=0.189 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEC-------CChhHHHHHHHHHHHHhcCch--hHhcCCC-ccCCceEEEecCCCchh-
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILA-------PGGSISNLYAFLAARHKMFPT--YKEKGLS-AIKGQLVMFTSDQCHYS- 180 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t-------~ggt~a~~~al~~~~~~~~~~--~~~~g~~-~~~g~~~vl~~~~~h~s- 180 (480)
.+.-.+..|+..+|.+...+++.. ..-..|+..+++.+....++. ..+.|+. ...+.+++|+|+..|.-
T Consensus 165 ~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~~l 244 (838)
T KOG0630|consen 165 SISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHMDL 244 (838)
T ss_pred hhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccHHH
Confidence 344456788999998855343332 222345555555555443332 2222322 01124499999999986
Q ss_pred HHHHHHHcCCCCCCeEEeeCCC----CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC-c
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDK----RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN-M 255 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~----~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~-~ 255 (480)
...+|+.+|+....+..++-.+ .|+||.-.+++.|+++..+|++|.+++...|++.+|..|.+-+|.++|++|+ +
T Consensus 245 ~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakf 324 (838)
T KOG0630|consen 245 LHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKF 324 (838)
T ss_pred HHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhhe
Confidence 4578888998654444444322 3699999999999999999999999999999999999999999999999997 9
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
|+|.-| |+..++.+-+-..-+..-.+..||++.+..-|++.|-.--+++ ..+ +... ....+ ..+
T Consensus 325 WLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~L-HRP-leg~----aaSaf-esd-------- 388 (838)
T KOG0630|consen 325 WLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLL-HRP-LEGS----AASAF-ESD-------- 388 (838)
T ss_pred eEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEe-ecc-cccc----cchhc-ccC--------
Confidence 999987 3333333322111011223468999999999999875333333 222 1110 01111 111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.-..++.+++.+|.+++.+|...+.++++....+.+.|.+.+.+ ++++++++
T Consensus 389 -----pi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa-~~eiemig 440 (838)
T KOG0630|consen 389 -----PILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASA-CEEIEMIG 440 (838)
T ss_pred -----hHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhc-CCceeEec
Confidence 11456678999999999999999999999999999999999999 99999885
No 378
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.39 E-value=4e-11 Score=115.81 Aligned_cols=182 Identities=20% Similarity=0.156 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
+....++.+.+.++++-....+.|++|||+|+..|++.++... ......+. ..++......|.....+....+-
T Consensus 58 ~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~-~~~~~~~r-----~~il~~~~~yHG~t~~~~s~~~~ 131 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYH-NKRAYTGR-----RKILAFEGSYHGRTLGALSLTGN 131 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHH-HHTHHHTT-----TEEEEETTTB-TSSHHHHHHSSS
T ss_pred ccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccc-ccccccCC-----ceEEEeeeeeeccCcccccccCC
Confidence 3445567888888884444569999999999999999999210 00011221 22444555667665555554321
Q ss_pred ---------CCCCeEEeeCCCCCCCCHHH----------HHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHH
Q psy12303 191 ---------GTDNCVEVPSDKRGRLIPSE----------LERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIA 247 (480)
Q Consensus 191 ---------~~~~v~~v~~~~~~~~d~~~----------L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~ 247 (480)
....+..+|.+ ++.. +++.+.+.. ...+++|+++..+...|.+.+ +++|.
T Consensus 132 ~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~ 204 (339)
T PF00202_consen 132 PPYRKGFGPLYPGVVFVPFP-----DPAADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELR 204 (339)
T ss_dssp THHHTTTCSSSTTEEEEETT-----CHHHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHH
T ss_pred ccccccccccccccccccCC-----ccchhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehc
Confidence 11355677776 3333 444444332 234789999999888887643 79999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
++|++||+++++|+++.++......+.. ...++ .+|+++++ |.++++.+.|.++++++
T Consensus 205 ~lc~~~gillI~DEV~tG~gRtG~~~a~-~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 205 ELCREHGILLIADEVQTGFGRTGKFFAS-EHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHHHTT-EEEEEETTTTTTTTSSSSGH-HHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccccccceecccccccccccCCccce-ecccc-cCcccccc--cchhhhhhcccccccch
Confidence 9999999999999999998665544433 44555 68999965 99988899999997754
No 379
>KOG2467|consensus
Probab=99.35 E-value=2.3e-10 Score=104.73 Aligned_cols=328 Identities=17% Similarity=0.117 Sum_probs=194.2
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCC-CCeE--ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE---ecCCCc
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQG-GDSI--LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF---TSDQCH 178 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~-~~~~--~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl---~~~~~h 178 (480)
.......++|.-..+..-+.||+++ .+++ -.-+||-||+.+..+... |++ +|. .++..|
T Consensus 79 GGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~--------------Ph~-RiMGLDLP~GGH 143 (477)
T KOG2467|consen 79 GGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLK--------------PHE-RIMGLDLPSGGH 143 (477)
T ss_pred CcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcC--------------CCC-eeeeccCCCCCc
Confidence 3445567788777788888999976 3443 344788899987777654 323 332 233445
Q ss_pred hhHHHHHHHcCCCCCC----eEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 179 YSVRSCAAVCGLGTDN----CVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~----v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
-|+-..-..-.+.... -....+|+ +|-||.|.||+....- +|++|++ |++.....-|..++.+||.+.
T Consensus 144 LsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----rPk~iia--G~SaY~R~~DYaR~R~Iad~~ 216 (477)
T KOG2467|consen 144 LSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----RPKLIIA--GTSAYSRLIDYARFRKIADKV 216 (477)
T ss_pred cccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----CCcEEEe--ccccchhhccHHHHHHHHHhc
Confidence 4432221111111101 11223453 6899999999877654 4888876 666666778899999999999
Q ss_pred CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhh-cCCcccccccccccCc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCN-QMSAEYLFMQDKLYDV 332 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~ 332 (480)
|+++++|-||-.+.+....... .++.+|+++.+.||.+-+|.+ |.+++|..-.-.... .....|-.. .
T Consensus 217 gA~Lm~DMAHISgLVAA~vips----PFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE------~ 285 (477)
T KOG2467|consen 217 GAYLMADMAHISGLVAAGVIPS----PFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLE------D 285 (477)
T ss_pred CceeehhhhhHHHHHhcccCCC----cccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceechh------h
Confidence 9999999999877664443222 345899999999999998765 566666532111000 000011100 0
Q ss_pred ccCC-CCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCcc
Q psy12303 333 RYDT-GDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRV 409 (480)
Q Consensus 333 ~~~~-~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~ 409 (480)
..+. .-.++|+|-.- ...++..+|++-..-.+.+..++..++++.|.+.|.+ .|++++..- +..++.+...|..+
T Consensus 286 kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~--~Gy~lvtgGTDnHlvLvDLr~~G~ 363 (477)
T KOG2467|consen 286 KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS--RGYKLVTGGTDNHLVLVDLRPKGV 363 (477)
T ss_pred hhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH--cCceEecCCccceEEEEeccccCC
Confidence 0110 01134444333 3445666787777778899999999999999999999 799998653 34455565555555
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecc---cCCCCHHHHHHHHHHHHHhh
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIIS---SAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~---~~~~t~~di~~~~~~l~~~~ 477 (480)
++. ..+.+. ++......+..+.-..+.. . ++.+|+..+ +...-++|.+++.+-|.+.+
T Consensus 364 dGa----rvE~vl----e~~~I~~NKNtvpGD~Sal-~-PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 364 DGA----RVEKVL----ELCHIALNKNTVPGDKSAL-S-PGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred chH----HHHHHH----HHhhhhhcCCcCCCCcccc-C-CCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 442 111111 1112211222111111111 1 567898732 23345789888888887654
No 380
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.29 E-value=5.2e-10 Score=102.32 Aligned_cols=329 Identities=19% Similarity=0.243 Sum_probs=177.5
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.|..+...-. +.+.+.+.||+.- ++-|.-|-.|-...+..++.. |. ..||+ +.++....|+-..
T Consensus 74 AYagsrs~~~----L~~avkdifGfq~--~iPthQGRgAE~Il~~i~ik~--------~~-~~pg~-~~~~~sN~~FdTT 137 (471)
T COG3033 74 AYAGSRSYYA----LADAVKDIFGFQY--TIPTHQGRGAENILIPILIKK--------GE-QEPGS-KMVAFSNYHFDTT 137 (471)
T ss_pred hhcccccHHH----HHHHHHHhcCcee--eeeccCCccHHHHHHHHHhhh--------cc-ccCCc-cccccccceecch
Confidence 3444444434 4555778888854 455555554443333333321 11 12544 5555666777665
Q ss_pred HHH-HHcCCCCCCeEEeeCC----------CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc---ccChHHHHH
Q psy12303 183 SCA-AVCGLGTDNCVEVPSD----------KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA---FDPIEEIAD 248 (480)
Q Consensus 183 ~~~-~~~g~~~~~v~~v~~~----------~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~~l~~I~~ 248 (480)
.+- ...|. ..+-++++ -.|.+|++.|++.|++...++. |.++.....++..|. +.+++++.+
T Consensus 138 r~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nv-p~I~~tiT~NsagGQpVSm~n~r~v~~ 213 (471)
T COG3033 138 RGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNV-PYIVLTITNNSAGGQPVSMANMKAVYE 213 (471)
T ss_pred hHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCcccC-cEEEEEEeccccCCCcchHHhHHHHHH
Confidence 554 33444 22223322 1478999999999998755443 333333333345554 467899999
Q ss_pred HHHHcCcEEEeecccccc-cccccc----ccCc-----ccCCCCCCccceeCccccCCCcccceEEEEeCchhhH---hh
Q psy12303 249 ICQKYNMWLHVDAAWGGG-LLLSKK----YRHP-----RLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLI---SC 315 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~-~~~~~~----~~~~-----~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~---~~ 315 (480)
||++|+++++.|+|-..- +.+..+ ++.- ....++.+|-+++|..|-..++.| |++++++..... .+
T Consensus 214 ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~ 292 (471)
T COG3033 214 IAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEEC 292 (471)
T ss_pred HHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHH
Confidence 999999999999975432 222221 1110 112244789999999999998764 888889885422 22
Q ss_pred hcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 316 NQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRA-KGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 316 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~-~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
....-.+- +...+|.. .||... ++...|.. .. ...+++.....+||.+.|.+ .|+.++.
T Consensus 293 ~~~~V~~e--------G~~tYGgl---~Grdme--alAvGL~e~~~----~~yl~~Rv~Qv~YL~~~l~~--~GVpi~~- 352 (471)
T COG3033 293 RTLVVVQE--------GFPTYGGL---AGRDME--ALAVGLREGVN----FDYLAHRVAQVQYLADGLEE--AGVPIVQ- 352 (471)
T ss_pred HhheEeec--------cccccCcc---cchhHH--HHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHh--cCCeeEe-
Confidence 21111110 00111111 222222 33333332 12 33456667778888899988 7998764
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-cc-------EEEeeeeeCCc-----ccEEEEecccCCC
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GT-------MMVGYQPLNDL-----PNFFRNIISSAAV 461 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~-------~~~~~~~~~~~-----~~~~R~~~~~~~~ 461 (480)
|.++.-+|.....-+.....+. +- .+.+...|... |+ +........+. -..+|++++-..-
T Consensus 353 paGGHavfvda~~~lphip~eq----Fp--aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtY 426 (471)
T COG3033 353 PAGGHAVFVDAGKFLPHIPAEQ----FP--AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTY 426 (471)
T ss_pred cCCCceEEeehhhhcCCCChhh----Cc--HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEecccccc
Confidence 4455544432211111111111 11 12233333332 32 22222111111 2579999877778
Q ss_pred CHHHHHHHHHHHHHhhc
Q psy12303 462 TEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~ 478 (480)
|.+++|.++++++++.+
T Consensus 427 t~~HmD~V~~a~~~l~e 443 (471)
T COG3033 427 TQTHMDFVIEAFKALKE 443 (471)
T ss_pred chhHHHHHHHHHHHHHh
Confidence 99999999999998765
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.17 E-value=2.8e-09 Score=100.76 Aligned_cols=165 Identities=18% Similarity=0.163 Sum_probs=112.5
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC-----CCchhHHHHHHHcCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD-----QCHYSVRSCAAVCGL 190 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~-----~~h~s~~~~~~~~g~ 190 (480)
.+.+..+.+.|.. .++++++.+.|.+..+.+.... + +++++- ..|+++...++..|.
T Consensus 72 ~~~~~~~~~~~ae--a~~ivnnn~aAVll~~~al~~~---------------~-EvVis~g~lV~gg~~~v~d~~~~aG~ 133 (395)
T COG1921 72 ELAELLCGLTGAE--AAAIVNNNAAAVLLTLNALAEG---------------K-EVVVSRGELVEGGAFRVPDIIRLAGA 133 (395)
T ss_pred HHHHHHhcccchh--heeeECCcHHHHHHHHhhhccC---------------C-eEEEEccccccCCCCChhHHHHHcCC
Confidence 3344444444444 4888888888888777666431 2 233222 579999999999998
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
++ +++....+-...+++.+|.++ ++++.-++.++. |.. .++++++++|+++|+++++|.+.|...-
T Consensus 134 ---~l--~EvG~tn~t~~~d~~~AIne~------ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~ 201 (395)
T COG1921 134 ---KL--VEVGTTNRTHLKDYELAINEN------TALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVD 201 (395)
T ss_pred ---EE--EEecccCcCCHHHHHHHhccC------CeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccc
Confidence 44 444455567889999999988 777766666554 544 4678899999999999999998866433
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhh
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISC 315 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~ 315 (480)
.-+..+. .+ . .++|.+++|++|.+++|. .|++. ..+++....
T Consensus 202 ~e~~l~~-~l-a-~GaDLV~~SgdKllgGPq-aGii~-GkKelI~~l 243 (395)
T COG1921 202 KEPDLRE-AL-A-LGADLVSFSGDKLLGGPQ-AGIIV-GKKELIEKL 243 (395)
T ss_pred cccchhH-HH-h-cCCCEEEEecchhcCCCc-cceEe-chHHHHHHH
Confidence 1111110 11 1 189999999999999976 45554 666666544
No 382
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.11 E-value=2.8e-08 Score=92.80 Aligned_cols=313 Identities=11% Similarity=0.009 Sum_probs=163.6
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.++.+++...++|-.++.-+.+..-. +.......-....++.+.+++.+.|..+-..++.+|+ ++
T Consensus 73 e~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~-~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gi---em 148 (425)
T PF12897_consen 73 EARELFAELLGVPPENVIVGGNSSLNLMHDTISRAML-HGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGI---EM 148 (425)
T ss_dssp HHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHH-H--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT----EE
T ss_pred HHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHh-cCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCc---EE
Confidence 4688899999999989888888886655544332111 0000000000011255899999999999999999999 99
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE-EeccCCCccccccChHHHHHHH----HHcCcEEEeecccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFV-NCTSGTTVLGAFDPIEEIADIC----QKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~~l~~I~~i~----~~~~~~l~vD~a~~~~~~~~ 270 (480)
+.||.+++| .|++.+|+.+.++.. ++.| ++.--+||+|.+..=+-+.+++ ...++.+..|-||+...+..
T Consensus 149 i~VpM~~dG-PDmD~Ve~LV~~D~s----vKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 149 IPVPMTEDG-PDMDMVEELVAEDPS----VKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp EEEEEETTE-E-HHHHHHHTHTSTT----EEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred EecCCCCCC-CCHHHHHHHHhcCCc----cceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 999998877 689999999876521 4544 6667789999998766666665 35689999999999988733
Q ss_pred ccccC--------cccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 271 KKYRH--------PRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 271 ~~~~~--------~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
+..+. ..-.|-.+--++..|.+|.-+.+.|.+++......+...........+ +
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tI-g----------------- 285 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTI-G----------------- 285 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S-------------------
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCcee-C-----------------
Confidence 22111 011232233355678999999878888877654432211000000000 0
Q ss_pred CCCCCCchHHHHHHHHh-cHH-HHHHHHHHHHH--------HHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCC
Q psy12303 343 CGRHNDIFKLWLQWRAK-GDE-GFEKQIDRLME--------LAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~-g~~-~~~~~~~~~~~--------l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
.+-+......+.+ ..+ |+.+..+++.+ ..+.|.++|.. -.++--+..|.++.|+.....++
T Consensus 286 ----pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~-~~~ia~Wt~P~GGYFIsld~~~G---- 356 (425)
T PF12897_consen 286 ----PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGD-GLGIASWTKPKGGYFISLDVLDG---- 356 (425)
T ss_dssp ------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGT-GGTSEEE---SBSS-EEEEESTT----
T ss_pred ----ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCC-CCCeeEecCCCCceEEEEecCCC----
Confidence 1122233333333 234 66555555543 23445556662 14566667888877654333222
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeee-eeC----CcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQ-PLN----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~-~~~----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..+++.+...+.|+.+..-+ .++ -....+|++ +++ -+.+|++...+.+.-++
T Consensus 357 -----------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiA-PS~-P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 357 -----------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIA-PSY-PSLEELETAMDVFATCV 413 (425)
T ss_dssp ------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE---SS-S-HHHHHHHHHHHHHHH
T ss_pred -----------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEec-CCC-CCHHHHHHHHHHHHHHH
Confidence 24678888889996554411 111 115689998 654 37888998888776443
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.11 E-value=1.6e-08 Score=93.72 Aligned_cols=335 Identities=15% Similarity=0.094 Sum_probs=184.9
Q ss_pred cccccCC-CChHHhHHHHHHHHcCcCC---cchh---cChhhHHHHHHHHHHHHHHhCCCC-CCeEECCCh-hHHHHHHH
Q psy12303 76 MNQLSCG-LDVVSMAGEWLIATANTNM---FTYE---IAPVFILMETVVLEKMRQIIGWQG-GDSILAPGG-SISNLYAF 146 (480)
Q Consensus 76 ~~~~~~~-~~~~~~~~~~l~~~~~~~~---~~~~---~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~gg-t~a~~~al 146 (480)
++|..+| ..|+.++..+-....+.+. ..-+ .+..+..+-.++.+.++++++.|. ..+.|..|| |....++.
T Consensus 7 ~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p 86 (365)
T COG1932 7 YNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAP 86 (365)
T ss_pred CCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHH
Confidence 3443333 3355555444444444333 1112 234455666678899999999976 456666555 44454444
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCC-CCHHHHHHHHHHHHHCCC
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGR-LIPSELERLVLERKAKGD 223 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~-~d~~~L~~~i~~~~~~~~ 223 (480)
+-+... ++. + -|....-+..+...+-..... . .+..+.. +..+. .+++... +.++
T Consensus 87 ~nLl~~-------~~~-----~-yv~~g~Ws~~a~~eA~~~~~~-~-~~~~~~~~~~~~~~iP~~~~~~--~~~~----- 144 (365)
T COG1932 87 MNLLGK-------RGT-----D-YVDTGAWSEFAIKEAKKVGKQ-P-KLIDARIEEAGYGSIPDLSKWD--FSDN----- 144 (365)
T ss_pred Hhhhcc-------cCc-----e-eEeeeehhHhHHHHHHHhccc-c-cccccceeccCccCCCChhhcc--cCCC-----
Confidence 444332 000 1 243433333344333333221 1 2222211 11222 2333332 2222
Q ss_pred ccEEEEeccCCCccccccC-hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 224 IPFFVNCTSGTTVLGAFDP-IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~-l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
...|.+++-.|.+|.-.| ...+.. +..+++|+..+.+..+.|..+ .|.+.++.+|.++ |-|.+
T Consensus 145 -~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iDvsk---------~dviyagaQKnlG-paGlt 208 (365)
T COG1932 145 -DAYVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSRPIDVSK---------YDVIYAGAQKNLG-PAGLT 208 (365)
T ss_pred -ccEEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcCCCChhH---------cceEEEehhhccC-ccceE
Confidence 446777777788997643 333321 178999999988887777654 4999999999999 67899
Q ss_pred EEEEeCchhhHhhhcC-Ccccccccc-cccCcccCCCCccccCCCCCCchHHHHH---HHHh-cHHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQM-SAEYLFMQD-KLYDVRYDTGDKVIQCGRHNDIFKLWLQ---WRAK-GDEGFEKQIDRLMELAE 376 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~~~~~~~~~r~~~~l~~~~~---l~~~-g~~~~~~~~~~~~~l~~ 376 (480)
++++|+. .+.+.... .+.-+.... ...+..+ +. ...++++.. ++.+ ..-|++.+.++..+.++
T Consensus 209 vvIvr~~-~l~r~~~~~~P~if~y~~~~~~~s~y-----NT-----Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~ 277 (365)
T COG1932 209 VVIVRPD-LLERAESYTLPSIFDYLTHADNGSMY-----NT-----PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQ 277 (365)
T ss_pred EEEEcHH-HHhcccccCCchHhhchhhhccCCcc-----CC-----cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9988765 44444332 222111100 0001111 10 112222222 2322 44578888999999999
Q ss_pred HHHHHHhcCCCCeEEec---CCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEE
Q psy12303 377 YMVKKIKSMPDKFYLIL---EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFR 453 (480)
Q Consensus 377 ~l~~~l~~~~~g~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R 453 (480)
.|.+.+.+ .+-+.-.. .....++||.+.... + .+.+...+.+.|.+.... ++. .+.+|
T Consensus 278 ~LY~~id~-s~fy~~~v~~~~RS~mnV~f~~~~~~------------l---d~~fv~eae~~gl~~lkG--hr~-vgGmR 338 (365)
T COG1932 278 LLYDWIDK-SDFYRNLVAKANRSRMNVTFTLVDAE------------L---DKGFVAEAEAAGLIYLKG--HRS-VGGLR 338 (365)
T ss_pred HHHHHHHh-CCccccccchhhccceeEEEEcCcHH------------H---HHHHHHHHHHcCCceecc--ccC-CCcee
Confidence 99999999 53222211 234567888654222 2 245566666777544332 233 34599
Q ss_pred EecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 454 NIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 454 ~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++ +......++++.|++-++.+.++
T Consensus 339 as-iynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 339 AS-IYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ee-eecCCCHHHHHHHHHHHHHHHHh
Confidence 99 88888999999999999887543
No 384
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=3.5e-08 Score=91.98 Aligned_cols=284 Identities=12% Similarity=0.077 Sum_probs=175.2
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC-CC-CCCCCH
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS-DK-RGRLIP 208 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~-~~-~~~~d~ 208 (480)
..+-|.|||.|+..+..-..... | +..|.+|+++.+.+.......|+ ++...|. |. +..+|.
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~~------------~-~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARFF------------P-DATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDF 159 (396)
T ss_pred hheecCCcchHHHHHHHHHHHhC------------C-CceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccH
Confidence 46789999998888776655431 3 44799999999999999999999 6666665 33 345898
Q ss_pred HHHHHHHHHHHHCCCccEEEEeccCCCcccccc---ChHHHHHHHHHcCcEEEeeccccccccccccccCc--ccCCCCC
Q psy12303 209 SELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHP--RLTGIER 283 (480)
Q Consensus 209 ~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~ 283 (480)
+.+.+.|+...+ ...++.-..++||||.-. .-++|.++.++.|+.-++|-||-|+.--.++..+. .+.....
T Consensus 160 ~~mla~L~~a~~---~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 160 DGMLADLKTAPE---GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred HHHHHHHHhCCC---CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 888888876532 245667777899999753 36889999999999999999998877544433221 0111101
Q ss_pred CccceeCccccCCCccc--ceEEE--EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH---HHH
Q psy12303 284 ADSVTWNPHKLMGTLLQ--CSTIH--FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW---LQW 356 (480)
Q Consensus 284 ~D~~~~s~hK~~~~p~~--~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~---~~l 356 (480)
-=+++.|++|.++. || .|++. ..+.+......+......... |+-+....+...+.. ..|
T Consensus 237 ~~lva~S~SKnfgL-YgERVGa~~vva~~~~~a~~v~sqlk~~iR~~------------ySnPP~~Ga~vva~IL~~p~L 303 (396)
T COG1448 237 ELLVASSFSKNFGL-YGERVGALSVVAEDAEEADRVLSQLKAIIRTN------------YSNPPAHGAAVVATILNNPEL 303 (396)
T ss_pred cEEEEehhhhhhhh-hhhccceeEEEeCCHHHHHHHHHHHHHHHHhc------------cCCCchhhHHHHHHHhCCHHH
Confidence 14678899999875 43 44443 344443333332221111110 000000001111111 123
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC--eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh
Q psy12303 357 RAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK--FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ 434 (480)
Q Consensus 357 ~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g--~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~ 434 (480)
+..-...+..+.+|..++++.|.+.|++..++ +..+ ..+.++|++. +. +.+-..+|.+
T Consensus 304 ra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~-------Gl------------s~~QV~rLre 363 (396)
T COG1448 304 RAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYT-------GL------------SPEQVDRLRE 363 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecC-------CC------------CHHHHHHHHH
Confidence 33334567888899999999999999872222 4443 4566777662 11 2334456666
Q ss_pred cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 435 AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+..++... . + |+|+. ..++..|+++++.|.++
T Consensus 364 e~~IY~v~---s---G--Ri~va--Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 364 EFGIYLVA---S---G--RINVA--GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred hccEEEec---C---C--eeeec--cCChhhHHHHHHHHHhh
Confidence 55444332 1 2 77743 45889999999999875
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.07 E-value=4e-08 Score=91.19 Aligned_cols=223 Identities=13% Similarity=0.095 Sum_probs=135.1
Q ss_pred HHHHHHhCCCCCCeE-ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC------
Q psy12303 119 EKMRQIIGWQGGDSI-LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG------ 191 (480)
Q Consensus 119 ~~la~~~g~~~~~~~-~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~------ 191 (480)
+-.|+.||++..-+- -.-+||.|+..+|..... |||..+.++..-|-.......+.|-+
T Consensus 61 ~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lr--------------pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e 126 (403)
T PF06838_consen 61 RIYADVFGAEDALVRPQFVSGTHAIALALFGVLR--------------PGDELLSITGKPYDTLEEVIGIRGNGPGSLKE 126 (403)
T ss_dssp HHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH----------------TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred HHHHHHhCchhhhhcccccchHHHHHHHHHhcCC--------------CCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence 447999999752111 123689999999987765 77867777877788888887665421
Q ss_pred -CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccc-------cccChHHHHHHHHHc--CcEEEeec
Q psy12303 192 -TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLG-------AFDPIEEIADICQKY--NMWLHVDA 261 (480)
Q Consensus 192 -~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G-------~~~~l~~I~~i~~~~--~~~l~vD~ 261 (480)
+.+...||..++|.+|.+.++++++++ +++|.+.= ..| .++.++++.+++|+. ++++.||-
T Consensus 127 ~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~------tk~v~IQR---SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 127 FGIKYREVPLTEDGTIDWEAIKKALKPN------TKMVLIQR---SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp GT-EEEE--B-TTSSB-HHHHHHHHHTT------EEEEEEE----S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred hCceeEEEeecCCCCcCHHHHHHhhccC------ceEEEEec---CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 236788999999999999999999976 88888743 344 335567777777766 68999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhh-cCCcccccccccccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCN-QMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
|||-+.-....... ++|.+..|+-|..+++ ..+|..++.++++.+.+. ...++-+..
T Consensus 198 CYGEFvE~~EP~~v-------GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~-------------- 256 (403)
T PF06838_consen 198 CYGEFVETQEPTEV-------GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGK-------------- 256 (403)
T ss_dssp TTTTTTSSS-GGGG-------T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGG--------------
T ss_pred CcceeccccCcccc-------chhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccc--------------
Confidence 99998765544444 9999999999998876 457888888887776532 122222211
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
++|-.+.......- |.---...+....+-+......+++ .|+++..
T Consensus 257 --e~G~t~~~~R~~~Q----GlFlAP~vV~eAlKgaif~A~~fe~--lG~~v~P 302 (403)
T PF06838_consen 257 --EVGATLGTNRLMFQ----GLFLAPHVVGEALKGAIFAAALFEK--LGFEVSP 302 (403)
T ss_dssp --GSS--TTTHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH--TT-EEES
T ss_pred --ccccCcchHHHHHh----HHhhchHHHHHHHHHHHHHHHHHHH--cCCcCCC
Confidence 12221222211110 2222355566677777777777777 7999864
No 386
>KOG1403|consensus
Probab=99.06 E-value=3.3e-08 Score=88.43 Aligned_cols=321 Identities=16% Similarity=0.109 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc--
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC-- 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~-- 188 (480)
+++.+-.+...+.+=+.+ -..|+++||+||-.||+.||+.. + . ..+|.+....|..+...+++.
T Consensus 86 d~lv~cA~~l~stlPeLs--vc~F~NSGSEANDLALRLAR~ft-------k----h-qDvItldHAYHGHl~s~mE~SPY 151 (452)
T KOG1403|consen 86 DELVQCARTLTSTLPELS--VCFFVNSGSEANDLALRLARNFT-------K----H-QDVITLDHAYHGHLQSVMEVSPY 151 (452)
T ss_pred HHHHHHHHHHhhcCCCce--EEEEecCCchhhHHHHHHHHhhc-------c----c-CceEEEechhccceeeeeeccce
Confidence 344444444555554433 48899999999999999999852 1 1 236777766676666655554
Q ss_pred ----CCC---CCCeEEeeCCC--CC-------------CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----
Q psy12303 189 ----GLG---TDNCVEVPSDK--RG-------------RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 189 ----g~~---~~~v~~v~~~~--~~-------------~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
|-+ ++-|...|+.+ .| ..-.+.+++.+++...+|...++.++.+-++--|.+-|
T Consensus 152 KF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagY 231 (452)
T KOG1403|consen 152 KFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGY 231 (452)
T ss_pred eccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhH
Confidence 111 11233334432 11 11235678888887777877888888888777787755
Q ss_pred hHHHHHHHHHcCcEEEeecccccccccccc-ccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKK-YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
.+++++..+.+|-..|.|+++-++...... +.+ ...++ -.|++++ .|-++.+.+.+++.... ++.+......-.
T Consensus 232 Fq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWaf-q~y~f-iPDIVtm--gKpmGNGhPVa~Vattk-eIA~Af~atgv~ 306 (452)
T KOG1403|consen 232 FQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAF-QTYNF-IPDIVTM--GKPMGNGHPVAAVATTK-EIAQAFHATGVE 306 (452)
T ss_pred HHHHHHHHhcCCCeEEeehhhhcccccchhhhhh-hhhcc-ccchhee--cccCCCCCeeeEEeccH-HHHHHhccccce
Confidence 789999999999999999999887664332 222 23333 5788884 58888788888888643 444433333344
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS 401 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~ 401 (480)
|+... +|.+.+.....+.++.... +++.++..+..++|...|++.-...+++++..+. -.
T Consensus 307 YFNTy----------------GGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGv-GL 366 (452)
T KOG1403|consen 307 YFNTY----------------GGNPVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGV-GL 366 (452)
T ss_pred ehhcc----------------CCCchhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceeccccc-eE
Confidence 44221 2222222233333444333 4555777788888888877611245666654432 22
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
|+-+.- +++.....-.. +.+.-+..+|.+...+.++... ++ .+.+.+- +..--+++++++++..|.+++
T Consensus 367 FiGIdL-VkD~~tRtP~t---k~A~~~v~rlke~y~VLlsaDG-Ph-~NilKiK-PPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 367 FIGIDL-VKDRKTRTPDT---KEAHWVVNRLKELYRVLLSADG-PH-RNILKIK-PPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred EEeeee-ecccccCCCcH---HHHHHHHHHHHHhhhEEEecCC-CC-CceeecC-CCcccChhhHHHHHHHHHHHH
Confidence 332210 01100000000 0123456777777666666422 23 5788876 555557888888888887764
No 387
>KOG2040|consensus
Probab=98.99 E-value=1.3e-07 Score=92.95 Aligned_cols=369 Identities=14% Similarity=0.057 Sum_probs=212.0
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHH--HcCcC-CcchhcChhhH
Q psy12303 35 PAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIA--TANTN-MFTYEIAPVFI 111 (480)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~--~~~~~-~~~~~~~~~~~ 111 (480)
|..++...+.++| .|....++++.++++...+..|.+-.=++|+.+. .|+.++..++.+ ++.+. ++..+.+.+
T Consensus 85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~-vP~~I~RNilenp~W~TqYTPYQ~EIsQG-- 160 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTH-VPAVILRNILENPGWYTQYTPYQAEISQG-- 160 (1001)
T ss_pred chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhhHHHHhhcccccccc-CcHHHHHHhhhCCcceeccCCCchhhhhh--
Confidence 3445555556665 6889999999999988766656554444455443 344455555543 22211 112222222
Q ss_pred HHHH--HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 112 LMET--VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 112 ~~e~--~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+|. .....++++.|.|-.+..+..-||.|-....++.+.. . +.+++++...|+-....++.-.
T Consensus 161 RLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~-------------k-rkk~vvd~~~hpqtlsV~~TRa 226 (1001)
T KOG2040|consen 161 RLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN-------------K-RKKFVVDSNCHPQTLSVVKTRA 226 (1001)
T ss_pred hHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc-------------c-cceEEecCCCCcchhhhhhccc
Confidence 3333 2457789999999888888888888777655555543 1 2268889999998877776542
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
-+. .+. +.+. |+.+...-. .....|++..|.| .|.+.|..++++.+++.|..+++-.---...+.
T Consensus 227 ~~~-~i~-v~~~-----~~~~~~~s~-------~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiL 291 (1001)
T KOG2040|consen 227 KGF-GIK-VVVS-----DIKEADYSS-------KDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTIL 291 (1001)
T ss_pred ccc-cee-EEec-----CHHHhhccc-------cceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHcc
Confidence 111 222 2221 332222111 1278899999954 699999999999999999876552211111112
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccc---------------cCccc
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL---------------YDVRY 334 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~ 334 (480)
-+...+ ++|++..|.+.++ +|.|-|.--..--...+......++.+.+-... ...+.
T Consensus 292 rpPgef-------GaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrR 363 (1001)
T KOG2040|consen 292 RPPGEF-------GADIAVGSSQRFG-VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRR 363 (1001)
T ss_pred CChhhc-------CceeeeccccccC-ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhh
Confidence 222233 8999999998874 466654422111111112222233333221111 11111
Q ss_pred CCCCccccCCCCCCchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCcc
Q psy12303 335 DTGDKVIQCGRHNDIFKLWLQW-----RAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 335 ~~~~~~~~~~r~~~~l~~~~~l-----~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
|-.+.++ | .+-++.+-+ ..+|.+|++++.++.+.++..|...|+. .|-+++.++-+-.+.++.-. .
T Consensus 364 DKATSNI-C----TAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~--aghel~~k~fFDTLkI~~~~-s- 434 (1001)
T KOG2040|consen 364 DKATSNI-C----TAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKN--AGHELQHKPFFDTLKIRCGC-S- 434 (1001)
T ss_pred hccchhh-h----HHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhh--cchhhccccccceEEEEecC-c-
Confidence 1111111 1 111111111 2349999999999999999999999998 68888776655555554321 0
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.+++..+..++++-+... + .+.+-++ .-..++++|++.++..+.
T Consensus 435 ---------------~~~~l~rA~~~~iNlr~~---e--d~tigvs-lDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 435 ---------------AEEVLDRAAKRQINLRLV---E--DGTIGVS-LDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ---------------HHHHHHHHHhhcCceEEe---e--cCceEEe-ecccccHHHHHHHHHHHc
Confidence 134555555555222221 1 3567777 778889999999998875
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.87 E-value=1.5e-09 Score=101.64 Aligned_cols=168 Identities=20% Similarity=0.208 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh------HHHHHHHcC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS------VRSCAAVCG 189 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s------~~~~~~~~g 189 (480)
.+.+.++.+.|+.. ++++++...|++.++.+... |+ +|++|...-.. +...++..|
T Consensus 51 ~v~~ll~~ltgAea--A~VvNnnaAAv~L~l~~la~---------------~~-EvIvsRGelVeiGgsFRip~vm~~sG 112 (367)
T PF03841_consen 51 HVEELLCELTGAEA--ALVVNNNAAAVLLALNTLAK---------------GK-EVIVSRGELVEIGGSFRIPDVMRQSG 112 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc--cccccccccccccccccccc---------------cc-cccccccccccccccccccccccccc
Confidence 45667889999875 78888888888888776543 13 67777655332 333444445
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc--ccc--cChHHHHHHHHHcCcEEEeeccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL--GAF--DPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~--G~~--~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
. .++.|-+. .+..+++++++|.++ |.++.-.+.+|.. |.. .+++++++++++|++++++|..-|.
T Consensus 113 a---~lvEVGtt--N~t~~~Dye~AI~e~------Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~ 181 (367)
T PF03841_consen 113 A---RLVEVGTT--NRTHLSDYEKAITEN------TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGL 181 (367)
T ss_dssp -----------------------------------------------------------HHHHHHHHHT--EEEE-TTHH
T ss_pred c---cccccccc--ccccccccccccccc------ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCC
Confidence 5 55555433 345678899999998 8888888877763 322 4799999999999999999997755
Q ss_pred ccccccccc---CcccCC--CCCCccceeCccccCCCcccceEEEEeCchhhHhh
Q psy12303 266 GLLLSKKYR---HPRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISC 315 (480)
Q Consensus 266 ~~~~~~~~~---~~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~ 315 (480)
..- ...+. .|.+.. -.++|.+++|+.|.+++|. +|+++ ..+++++..
T Consensus 182 l~d-l~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~-Gkk~lI~~l 233 (367)
T PF03841_consen 182 LVD-LSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIV-GKKELIEKL 233 (367)
T ss_dssp HHH-HHTT----------CCCCT-SEEEEETTSSSSS-S--EEEE-EEHHHHHHH
T ss_pred CcC-cccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEE-eCHHHHHHH
Confidence 321 11110 011111 1389999999999999987 57666 556666544
No 389
>KOG3843|consensus
Probab=98.86 E-value=2.7e-08 Score=87.45 Aligned_cols=231 Identities=17% Similarity=0.123 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCeEECCChh-HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 111 ILMETVVLEKMRQIIGWQG-GDSILAPGGS-ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~-~~~~~t~ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
..+..++....-.+.|... .+.++++-+| +++...+...|.++ |.-.-|+......-|..+..-..
T Consensus 56 ~~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~kr------------pkakyiiw~ridqks~~ksi~~a 123 (432)
T KOG3843|consen 56 ACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKR------------PKAKYIIWLRIDQKSCFKSIIHA 123 (432)
T ss_pred HHHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcC------------CcccEEEEEecchHHHHHHHHhc
Confidence 3444555556666777632 2233333222 44555555555531 32336778888888888888888
Q ss_pred CCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc---ccChHHHHHHHHHcCcEEEeeccc
Q psy12303 189 GLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA---FDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 189 g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
|..+ ++.-++-+ .-..|++++++.+++.. +-||...+.+|.+-+ .|.+++|+.||..|+++-+|..||
T Consensus 124 gfep--iiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 124 GFEP--IIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred CCCc--eeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 8853 33333322 24668889988888763 456666566555443 378999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
|...-.+-..-. ....+.++|.++-|..|.+.+|.|..++..-+...++... ..|-
T Consensus 197 glqsee~i~~ia-a~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~ia---k~yp-------------------- 252 (432)
T KOG3843|consen 197 GLQSEECIHKIA-AAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIA---KMYP-------------------- 252 (432)
T ss_pred ccchHHHHHHHH-HHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHH---HhCC--------------------
Confidence 875432211000 1122347899999999999999876665543333333322 1121
Q ss_pred CCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 344 GRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 344 ~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
||. ..++.+..+|..+|+.++.+...+..++--+++..+.+
T Consensus 253 grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 253 GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 24567778888889999988888877777777766554
No 390
>KOG1405|consensus
Probab=98.49 E-value=9.6e-06 Score=74.69 Aligned_cols=222 Identities=16% Similarity=0.118 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeccCCCccccc----cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC-C
Q psy12303 208 PSELERLVLERKAKGDIPFFVNCTSGTTVLGAF----DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI-E 282 (480)
Q Consensus 208 ~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~----~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~ 282 (480)
++++|+.|.+...+...++++++...++.-|.- +=+..+.+|+++||+-++||+++.|+......+.+ ...++ .
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaH-ehw~l~~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAH-EHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeee-hhcCCCC
Confidence 467888888877777778899999888887754 33799999999999999999999998877766655 33333 3
Q ss_pred CCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHH
Q psy12303 283 RADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDE 362 (480)
Q Consensus 283 ~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~ 362 (480)
-+|.+++| |-+.. .| ++ .+..+. ...+|-. +.+| +|-++..+-+-..++.+..+
T Consensus 334 PpD~vTFS--KK~q~---gG-ff-h~~~fr-----pn~pYri-----------fNTW---mGdP~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 334 PPDVVTFS--KKFQT---GG-FF-HDEEFR-----PNEPYRI-----------FNTW---MGDPSKNLLLEEVVQEIKRE 387 (484)
T ss_pred Cccceehh--hhhhc---Cc-cc-cCcccC-----CCchHHH-----------hhhh---cCChHHHHHHHHHHHHHhHH
Confidence 57888854 54443 23 33 343332 1222211 1111 22223344444444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEE
Q psy12303 363 GFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMM 439 (480)
Q Consensus 363 ~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~ 439 (480)
+ +++......++|...|.+. .|+.-- .-...++++-+..|.. +. ..++...+..+|.-+
T Consensus 388 ~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~-~~RGrGTF~a~d~ps~-------~~-------Rdk~i~~~~~nGv~~ 449 (484)
T KOG1405|consen 388 D---LLNNVAHVGKALLKGLLELQAKYPGKIN-NLRGRGTFIAWDCPSG-------SI-------RDKLILIARLNGVNL 449 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhCchhhh-cccccceEEEEeCCCh-------HH-------HHHHHHHHHHcCcee
Confidence 3 4455555666666655441 444321 1122445554443322 11 134556666777332
Q ss_pred EeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 440 VGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 440 ~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
-.. | ...+|+- ++..-++.+.+-+++.+.++++.|
T Consensus 450 GGC----g-~~siRfR-PsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 450 GGC----G-DKSIRFR-PSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred ccc----c-cceeeec-cceeehhhhHHHHHHHHHHHhccC
Confidence 222 2 3578887 888889999999999999988764
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.33 E-value=9.9e-06 Score=72.97 Aligned_cols=166 Identities=14% Similarity=0.156 Sum_probs=114.9
Q ss_pred HHHHhCCCCC--CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC-------
Q psy12303 121 MRQIIGWQGG--DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG------- 191 (480)
Q Consensus 121 la~~~g~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~------- 191 (480)
.|+.||.+.. ...|. +||.|+..||..... |||..+++...-+...+....+-|-+
T Consensus 74 yA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~LR--------------pgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 74 YAQVFGAEAALVRPQII-SGTHAIACALFGILR--------------PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred HHHHhccccceeeeeee-cchhHHHHHHHhccC--------------CCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 6788888652 23344 577877777765543 77877888777777777766555421
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccC----CCccccccChHHHHHHHHHc--CcEEEeeccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSG----TTVLGAFDPIEEIADICQKY--NMWLHVDAAWGG 265 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~----~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~ 265 (480)
......||...+|.+|.+.+++.+.+. +++|.+.-- .-|+=.+.+++++..+.|+. |+.+.||.|||.
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~~~------tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAISDR------TKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcCcc------ceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 125677899899999999999999987 888776422 12222446678888888876 689999999999
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHh
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLIS 314 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~ 314 (480)
+.-....... ++|.+..|+-|.-+++. -.|..+....++.+.
T Consensus 213 FvE~~EPt~v-------GaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 213 FVEEKEPTHV-------GADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred hhhccCcccc-------chhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 8653333233 89999999999877653 345556566555543
No 392
>KOG1412|consensus
Probab=98.04 E-value=0.00059 Score=62.14 Aligned_cols=285 Identities=12% Similarity=0.070 Sum_probs=159.3
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCCCCH
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGRLIP 208 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~~d~ 208 (480)
.++-+-|||.|+..+..-.... + + +..|++|.++..++...++-.|.- .+...+. .++-.+|+
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~-~-----------~-~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~ 165 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATF-Y-----------N-KNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDL 165 (410)
T ss_pred cceeeccccchhhhhHHHHHHh-c-----------c-cceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecH
Confidence 4677778999887776544332 1 2 338999999999999999999852 3333333 23457888
Q ss_pred HHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEeeccccccccccc-cccCc----ccC
Q psy12303 209 SELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVDAAWGGGLLLSK-KYRHP----RLT 279 (480)
Q Consensus 209 ~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~-~~~~~----~~~ 279 (480)
+.+...|+...+ ....|+-...+||||. || -..|++..++.+.....|-||-|++---+ ...|- .-.
T Consensus 166 e~~Lsdl~~APe---~si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~ 241 (410)
T KOG1412|consen 166 EGFLSDLESAPE---GSIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ 241 (410)
T ss_pred HHHHHHHhhCCC---CcEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence 877777765422 1223333344899995 44 56799999999999999999988765221 11110 111
Q ss_pred CCCCCccceeCccccCCCc---ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHH-
Q psy12303 280 GIERADSVTWNPHKLMGTL---LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQ- 355 (480)
Q Consensus 280 ~~~~~D~~~~s~hK~~~~p---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~- 355 (480)
|++ =++|-|+.|.+|.- .|+=.++++++.......++..-.+.. +++-+....++...-.+.
T Consensus 242 g~e--~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~------------~~SNPPAyGArIV~kvL~t 307 (410)
T KOG1412|consen 242 GFE--LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRS------------NWSNPPAYGARIVHKVLST 307 (410)
T ss_pred CCe--EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhh------------ccCCCcchhhHHHHHHhcC
Confidence 211 25666899988742 244445556664433222111111100 011111111111111110
Q ss_pred --HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CC-eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 356 --WRAKGDEGFEKQIDRLMELAEYMVKKIKSMP--DK-FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 356 --l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~--~g-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
++..-...++.+..|..+++..|++.|.+ + || +.=+ ..+.+++.|.. ++..-.+
T Consensus 308 P~lre~W~~sik~MssRI~~MR~aLrd~L~a-L~TPGtWDHI-~~QiGMFSyTG-------------------Ltp~qV~ 366 (410)
T KOG1412|consen 308 PELREQWIQSIKTMSSRIKKMRTALRDHLVA-LKTPGTWDHI-TQQIGMFSYTG-------------------LTPAQVD 366 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcHHHH-HhhccceeecC-------------------CCHHHHH
Confidence 11111345667777888888888888877 3 22 1100 14566666631 1244567
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+|.++..+++.. .+ |++++. .+...+|++.++|.+.++.
T Consensus 367 ~li~~h~vyLl~------~G--RInisG--LN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 367 HLIENHKVYLLS------DG--RINISG--LNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred HHHHhceEEEec------CC--cEeeec--cccccHHHHHHHHHHHHHh
Confidence 787877666554 12 444322 3456788888888876653
No 393
>KOG2790|consensus
Probab=97.93 E-value=0.0021 Score=57.83 Aligned_cols=341 Identities=16% Similarity=0.088 Sum_probs=180.6
Q ss_pred cccccCCC-ChHHhHHHHHHHHcCcCCcch---hc---ChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHH
Q psy12303 76 MNQLSCGL-DVVSMAGEWLIATANTNMFTY---EI---APVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFL 147 (480)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~---~~---~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~ 147 (480)
.+|..+|. .|.+++.++-...+|-+...- +. +.-+..+-......+.++++.|+ ..++|.-||-..-+.|+.
T Consensus 9 vnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~ 88 (370)
T KOG2790|consen 9 VNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVP 88 (370)
T ss_pred eecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccc
Confidence 34444443 344556566666666554222 22 23345566677889999999976 455555444333333332
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-C-CC-CCHHHHHHHHHHHHHCCCc
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-R-GR-LIPSELERLVLERKAKGDI 224 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~-~~-~d~~~L~~~i~~~~~~~~~ 224 (480)
.-.-. .+.|. +-+ -|++..-+--+...+-+. |. .+.+..+..+ . |. -|.+.++.. ++
T Consensus 89 lNL~g-----lK~g~---~Ad-YiVTGsWS~KA~~EAkk~-~~--~~~V~~~~k~y~ygkvPd~~~w~~~--~d------ 148 (370)
T KOG2790|consen 89 LNLIG-----LKHGR---CAD-YVVTGSWSAKAAEEAKKY-GT--PNIVIPKLKSYTYGKVPDPSTWELN--PD------ 148 (370)
T ss_pred hhhhc-----cccCC---ccc-eEEeccccHHHHHHHHhh-CC--ceEEeccccccccCcCCChhhcccC--CC------
Confidence 21110 00121 223 566654333333333322 22 1233333222 1 22 244444322 22
Q ss_pred cEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 225 PFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 225 ~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
...|..|.-.|..|.- +++. +-.-+|..++.|-..-....+.+..++ +.+....+|..+ |.|.-+
T Consensus 149 a~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSSnflSrpvDvsk~---------gvi~aGAQKN~G-~aG~Tv 214 (370)
T KOG2790|consen 149 ASYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSSNFLSRPVDVSKF---------GVIFAGAQKNVG-PAGVTV 214 (370)
T ss_pred ccEEEEecCceeeceecCCCC----CCCCCCceEEEecccchhcCCccchhc---------ceEEeccccccC-ccccEE
Confidence 4588888888999974 3333 223467889999877666666666544 678888999998 688888
Q ss_pred EEEeCchhhHhhhcCCcccccccccc-cCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEYLFMQDKL-YDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKK 381 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~ 381 (480)
+++|+. ++.......|.-+.-.... ....++ +++| +....+-+.++.+ ..-|+.++.+...+.++.+.+.
T Consensus 215 vivr~d-llg~~~~~tP~v~dyk~~~~NnSlyN----TpP~---f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~ 286 (370)
T KOG2790|consen 215 VIVRKD-LLGNALDITPSVLDYKIMDKNNSLYN----TPPC---FGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDA 286 (370)
T ss_pred EEEehh-hhcccccCCccccceeeecccccccc----CCCe---eeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 888875 3333332333222110000 000000 0111 1111222233322 2346777778888899999999
Q ss_pred HhcCCCCeEEe-cCC---ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecc
Q psy12303 382 IKSMPDKFYLI-LEP---EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIIS 457 (480)
Q Consensus 382 l~~~~~g~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~ 457 (480)
|.+ ..||-.. .+| ..-+++|+..+.. +. .++.....+++. +..-++.. .+.+|.| .
T Consensus 287 iD~-s~gfy~cpVe~~~RS~MNV~Fri~~d~--------Le-------~eFLkeA~~~~m--v~LKGhRS-VGGiRAS-l 346 (370)
T KOG2790|consen 287 IDN-SNGFYRCPVEPSVRSRMNVPFRIEKDE--------LE-------AEFLKEAAKEHM--VQLKGHRS-VGGIRAS-L 346 (370)
T ss_pred HHh-cCCeEEcccchhhhhhcccceeecchH--------HH-------HHHHHHHHHhhh--hccccccc-cccchhh-h
Confidence 999 7787653 233 3456788754222 11 222222223331 12112233 4679999 7
Q ss_pred cCCCCHHHHHHHHHHHHHhhc
Q psy12303 458 SAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 458 ~~~~t~~di~~~~~~l~~~~~ 478 (480)
.-..+-++++.+++-+++..+
T Consensus 347 YNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 347 YNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred hccccHHHHHHHHHHHHHHHH
Confidence 677899999999999998765
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.78 E-value=0.0039 Score=58.22 Aligned_cols=290 Identities=13% Similarity=0.082 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHhCC---CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGW---QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~---~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
.++|+. ++.|-+++|= +...++|.+|+|+-+..|+.++-.. ... .+....|+...+.++++......
T Consensus 46 ~eL~~~-Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~-------~~~--~~~p~~VVa~aPYY~~Y~~qt~~ 115 (363)
T PF04864_consen 46 PELERQ-IRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPN-------ASP--SSSPASVVAAAPYYSSYPEQTDF 115 (363)
T ss_dssp HHHHHH-HHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHH-------T-T--TSSSEEEEE-SS--CHHHHHCCC
T ss_pred HHHHHH-HHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCC-------CCC--CCCCceeEecCCCccchHHHHHh
Confidence 455554 4445566663 4456899999998766666655321 000 02245788888888887777666
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
+.-+ ...+---...+. .. .+..+.+=++|.|+||.|.+-. .+++.-+..+|-|-||-...
T Consensus 116 f~s~--~y~w~Gda~~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPh 175 (363)
T PF04864_consen 116 FDSR--LYKWAGDASNFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPH 175 (363)
T ss_dssp T-BT--TEEEEEECCCGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STT
T ss_pred cccc--CccccccHHhhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeeccc
Confidence 6432 222222111121 11 1123677799999999998631 11344566789999987766
Q ss_pred c-ccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 268 L-LSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
+ +++. .. +-|++.++.+|.=| ++...|+-++||++...... .|+... ++..+|
T Consensus 176 yTpI~~-~a-------D~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~----~y~~ln-------------TiGvS~ 230 (363)
T PF04864_consen 176 YTPITA-PA-------DHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT----KYMELN-------------TIGVSR 230 (363)
T ss_dssp TS---S--B---------SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH----HHHHHH-------------CSS--H
T ss_pred ccccCC-CC-------CCceEEEEEecccCccccccceeeecCHHHHHHHH----HHHHHh-------------cccCcH
Confidence 5 2221 22 56899999999866 34568999999997655432 222111 000111
Q ss_pred C--CCchHHHHHHH-HhcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCeEEec-CCcee-----------EEEE-Ee
Q psy12303 346 H--NDIFKLWLQWR-AKGDE-----GFEKQIDRLMELAEYMVKKIKSMPDKFYLIL-EPEMV-----------NVSF-WY 404 (480)
Q Consensus 346 ~--~~~l~~~~~l~-~~g~~-----~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~-~~~~~-----------~v~f-~~ 404 (480)
- .+++++.-.+. .++.+ -+.--.+.+.+.=+.|.+.+.+ ...|.+-. +|+.+ .+.+ ++
T Consensus 231 dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~-S~rFSLq~~~~~yC~ff~~~~~psPafAWlkC 309 (363)
T PF04864_consen 231 DSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSA-SKRFSLQKFSPQYCNFFKRVREPSPAFAWLKC 309 (363)
T ss_dssp HHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCC-SSSEEE---SCEEETTTTCEEE---SEEEEEE
T ss_pred HHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHh-cCceecCcCCchhccccccccCCCCCeEEEec
Confidence 1 13444433322 22222 1222233344445566677777 66676632 22221 1222 11
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++ ..+....|.+.+++-.+ +...| ...++|+|. .-+++|.+.++++|.++
T Consensus 310 e~ee----------------d~DC~~~l~~~~I~tr~-G~~fga~~ryVRlSm---l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 310 EREE----------------DEDCYAVLREAKIITRS-GVLFGADSRYVRLSM---LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp SSCG----------------GSSHHHHHHCTTEEEEE-GGGGTS-TTEEEEES---SS-HHHHHHHHHHHHCC
T ss_pred CCcc----------------cccHHHHHHhCCcccCC-CCccCCCCCeEEEec---cCCHHHHHHHHHHHHhh
Confidence 1111 01344555566643333 33333 267999993 45899999999999875
No 395
>KOG1411|consensus
Probab=97.53 E-value=0.00039 Score=64.18 Aligned_cols=283 Identities=11% Similarity=0.042 Sum_probs=154.0
Q ss_pred ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHH
Q psy12303 134 LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELER 213 (480)
Q Consensus 134 ~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~ 213 (480)
-|-+||.|+..+..-... ++ |++ .|+++.++...+.......|+.....++.. ..+..+|.+.+-+
T Consensus 125 Q~lSGTGaLriga~Fl~~-f~-----------~~~-~I~ip~PTWgNh~~if~~ag~~~~~yrYyd-~~t~gld~~g~le 190 (427)
T KOG1411|consen 125 QTLSGTGALRVGAEFLAR-FY-----------PSR-DIYIPDPTWGNHKNIFKDAGLPVKFYRYYD-PKTRGLDFKGMLE 190 (427)
T ss_pred EeccCcchhhHHHHHHHh-hc-----------ccc-ceeecCCcccccCccccccCcceeeeeecc-ccccccchHHHHH
Confidence 445778766655443322 21 434 899999998888888888887432223221 2345678776666
Q ss_pred HHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHcCcEEEeeccccccccc-cccccCc-ccCCCCCCc-cc
Q psy12303 214 LVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKYNMWLHVDAAWGGGLLL-SKKYRHP-RLTGIERAD-SV 287 (480)
Q Consensus 214 ~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~-~~~~~~~-~~~~~~~~D-~~ 287 (480)
.+.+..+ .-.+++--..+||||.= +..++|.++.++.+..-++|.||-++..- .+..... ++.--.+.. .+
T Consensus 191 dl~~~p~---gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~l 267 (427)
T KOG1411|consen 191 DLGEAPE---GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILL 267 (427)
T ss_pred HHhcCCC---CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEe
Confidence 6655422 13445555667899853 33688999999999999999999988652 1111110 000001222 45
Q ss_pred eeCccccCCCc-ccceEE--EEeCchhhHhhhcC-----CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh
Q psy12303 288 TWNPHKLMGTL-LQCSTI--HFKQDGLLISCNQM-----SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK 359 (480)
Q Consensus 288 ~~s~hK~~~~p-~~~g~~--~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~ 359 (480)
+-|+-|.+|.- -..|.+ ++.+.+...+..++ .+-|-.. -+.+.|-.+.+---..|+.-
T Consensus 268 aQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnP--------------P~hGArIv~~Il~d~~l~~~ 333 (427)
T KOG1411|consen 268 AQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNP--------------PLHGARIVATILSDPDLKNQ 333 (427)
T ss_pred ehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCC--------------CccchhhhhhccCChHHHHH
Confidence 66888988742 123433 33444333322211 2222111 01122211111000111111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE-e--cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcc
Q psy12303 360 GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL-I--LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAG 436 (480)
Q Consensus 360 g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~-~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g 436 (480)
-......+.+|.+.++..|.+.|.+ +|-.. + -..+.++|||... +.+-.+.|..+.
T Consensus 334 W~~evk~MadRi~~mR~~L~d~L~~--~gs~~~W~hI~~QIGMF~fTgl-------------------~peQv~~l~ke~ 392 (427)
T KOG1411|consen 334 WLGEVKGMADRIISMRQQLFDALEK--EGSPGNWSHITKQIGMFCFTGL-------------------NPEQVDWLTKEY 392 (427)
T ss_pred HHHHHHHHHHhhhhhHHHHhHHhhc--CCCCccHHHHHHhhheeeecCC-------------------CHHHHHHHHhhh
Confidence 1234567788999999999999988 44332 0 0256789998532 234456666665
Q ss_pred cEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 437 TMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 437 ~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++.+. + =|+|+. ..+...+.++.++|.++.+
T Consensus 393 ~iYmT~---d-----GRiS~a--G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 393 HIYLTK---D-----GRISMA--GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred eeeecc---C-----ceEeec--cccccCCcccchhhHhHhc
Confidence 444443 1 256632 2355667888888877654
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.33 E-value=0.0092 Score=50.22 Aligned_cols=61 Identities=10% Similarity=0.173 Sum_probs=49.3
Q ss_pred hhcChhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
|....+..++.+++++++.+.+| ++++++++|+|++.|+..++.++.+ ||+ .|+++.+.|+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--------------pGD-~VlVp~P~Y~ 152 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--------------PGD-AFLVPTPYYA 152 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--------------CCC-EEEEeCCCCC
Confidence 44445667889999999999988 3567899999999999999988876 556 7888877764
No 397
>KOG0352|consensus
Probab=88.44 E-value=2.9 Score=40.61 Aligned_cols=71 Identities=17% Similarity=0.150 Sum_probs=42.7
Q ss_pred EeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcC--cEEEeeccccccccccc
Q psy12303 197 EVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYN--MWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 197 ~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~--~~l~vD~a~~~~~~~~~ 271 (480)
.||++. +..++..+=.+.+-+..+....++++.+| |.|+- +-.+.+..-..+++ .+++||+||....+-.+
T Consensus 85 KVp~~SLNSKlSt~ER~ri~~DL~~ekp~~K~LYIT----PE~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHD 159 (641)
T KOG0352|consen 85 KVPCESLNSKLSTVERSRIMGDLAKEKPTIKMLYIT----PEGAATDGFQKLLNGLANRDVLRYIVVDEAHCVSQWGHD 159 (641)
T ss_pred CCchhHhcchhhHHHHHHHHHHHHhcCCceeEEEEc----hhhhhhhhHHHHHHHHhhhceeeeEEechhhhHhhhccc
Confidence 456554 55666666556665555555668888884 44443 23444444333444 48999999988766443
No 398
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=88.03 E-value=9.8 Score=35.50 Aligned_cols=140 Identities=24% Similarity=0.259 Sum_probs=81.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc-h---hHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH-Y---SVR 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h-~---s~~ 182 (480)
......+|.-+-+.+.+ ....++|-||..||..-..++..++ .|. +.+.++....- | ...
T Consensus 46 GNK~RKLefll~eal~~-----g~dTlvT~GgiQSNh~r~tAavA~~------lGl-----~~v~ile~~~~~y~~ngn~ 109 (323)
T COG2515 46 GNKIRKLEFLLGEALRK-----GADTLVTYGGIQSNHVRQTAAVAAK------LGL-----KCVLILENIEANYLLNGNL 109 (323)
T ss_pred ccHHHHHHHHHhhhhhc-----CCcEEEEecccchhHHHHHHHHHHh------cCC-----cEEEEEeccccccccccch
Confidence 34445666554444432 2347999999999998887776642 454 44555543330 0 022
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc---ccChHHHHHHHHH-cCcEEE
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA---FDPIEEIADICQK-YNMWLH 258 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~~l~~I~~i~~~-~~~~l~ 258 (480)
.-...+|. .++.++...+..++. .+++..++.+++|.+|. |+...++++.|. +.-..||.+-+++ ..+-.+
T Consensus 110 Ll~~l~G~---~~~~~~~~~d~~~~~-~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~v 184 (323)
T COG2515 110 LLSKLMGA---EVRAVDAGTDIGINA-SAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSV 184 (323)
T ss_pred hhhhhcCc---eEEEecCCCChhhch-hhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEE
Confidence 33344555 677776555543332 24444445555677774 555566888554 4556788888887 456666
Q ss_pred eeccccccc
Q psy12303 259 VDAAWGGGL 267 (480)
Q Consensus 259 vD~a~~~~~ 267 (480)
|.++-+++.
T Consensus 185 Vva~gs~gT 193 (323)
T COG2515 185 VVAPGSGGT 193 (323)
T ss_pred EEeCCCcch
Confidence 766655554
No 399
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=73.22 E-value=8.4 Score=33.55 Aligned_cols=48 Identities=17% Similarity=0.122 Sum_probs=38.5
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
-|..++=.+-.|..|..|++..- +..|.....+++.++|++||+.++.
T Consensus 143 TEasVdLarlAGl~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 143 TEAAVDLARLAGLKPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred HHHHHHHHHHcCCCCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEEE
Confidence 35555555567888988888777 6699999999999999999998753
No 400
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=70.72 E-value=30 Score=29.84 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=45.7
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA 247 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~ 247 (480)
+..++......+.......++|+ ++...+.+ +.++++..+++..+.| ..+|+... -+.
T Consensus 79 ~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~i~~~~~~G--~~viVGg~------------~~~ 136 (176)
T PF06506_consen 79 KIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-----SEEEIEAAIKQAKAEG--VDVIVGGG------------VVC 136 (176)
T ss_dssp EEEEEEESS-SCCHHHHHHHHT----EEEEEEES-----SHHHHHHHHHHHHHTT----EEEESH------------HHH
T ss_pred cEEEEecccccHHHHHHHHHhCC---ceEEEEEC-----CHHHHHHHHHHHHHcC--CcEEECCH------------HHH
Confidence 43455555555568888888888 77777776 7888999998887777 44555411 236
Q ss_pred HHHHHcCcEEEe
Q psy12303 248 DICQKYNMWLHV 259 (480)
Q Consensus 248 ~i~~~~~~~l~v 259 (480)
++|+++|+..+.
T Consensus 137 ~~A~~~gl~~v~ 148 (176)
T PF06506_consen 137 RLARKLGLPGVL 148 (176)
T ss_dssp HHHHHTTSEEEE
T ss_pred HHHHHcCCcEEE
Confidence 788888876543
No 401
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=70.31 E-value=92 Score=28.87 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=47.0
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcE
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMW 256 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~ 256 (480)
.|.++...++.+|+ ++..+. .++....+.+|.+.++..++++ .++|+.....+. +.+..++++.|+.
T Consensus 176 ~H~af~Y~~~~ygl---~~~~~~-~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~la~~~g~~ 242 (266)
T cd01018 176 YHPAWGYFARDYGL---TQIPIE-EEGKEPSPADLKRLIDLAKEKG--VRVVFVQPQFST-------KSAEAIAREIGAK 242 (266)
T ss_pred ECchhHHHHHHcCC---EEEecC-CCCCCCCHHHHHHHHHHHHHcC--CCEEEEcCCCCc-------HHHHHHHHHcCCe
Confidence 78899999999999 544442 2445677778887777666555 556766544322 4455788898887
Q ss_pred EEe
Q psy12303 257 LHV 259 (480)
Q Consensus 257 l~v 259 (480)
++.
T Consensus 243 v~~ 245 (266)
T cd01018 243 VVT 245 (266)
T ss_pred EEE
Confidence 643
No 402
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=68.89 E-value=58 Score=30.65 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=47.8
Q ss_pred CchhHHHHHHHcCCCCCCeEE-eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVE-VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~-v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|+++...++.+|+ +++. +...++....+.+|.+.++.-++++ .++|+.....+. +.+..++++.|+
T Consensus 183 ~H~af~Y~~~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~ia~~~gv 250 (287)
T cd01137 183 SEGAFSYFAKAYGL---KEAYLWPINTEEEGTPKQVATLIEQVKKEK--VPAVFVESTVND-------RLMKQVAKETGA 250 (287)
T ss_pred ecccHHHHHHHcCC---eEeecccCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEeCCCCh-------HHHHHHHHHhCC
Confidence 78899999999999 4443 2334456678888888887766555 456665544332 556788899888
Q ss_pred EE
Q psy12303 256 WL 257 (480)
Q Consensus 256 ~l 257 (480)
.+
T Consensus 251 ~v 252 (287)
T cd01137 251 KI 252 (287)
T ss_pred cc
Confidence 64
No 403
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=68.34 E-value=13 Score=35.04 Aligned_cols=61 Identities=11% Similarity=-0.056 Sum_probs=38.0
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh---HHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI---EEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l---~~I~~i~~~~---~~~l~v 259 (480)
...|.++++++|.+.+++.++...+.|..-.++ .|+|--+..... .++.+.+.+. ++++++
T Consensus 8 ~vTPf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v---~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 8 PVTHFDADGSFDEDAYRAHVEWLLSYGAAALFA---AGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred eecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEE---CcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 345677889999999999999888777543333 344444444444 4444444443 366665
No 404
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=67.47 E-value=11 Score=29.15 Aligned_cols=48 Identities=27% Similarity=0.275 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
..+++++|++.+.+. |-.|++ ||..+|.+.=.++..+.+++.++-+++
T Consensus 47 Hkl~~eEle~~lee~------~E~ivv--GTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEG------PEVIVV--GTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcC------CcEEEE--ecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 468999999999976 666666 666689988889999999999976654
No 405
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=67.06 E-value=21 Score=31.21 Aligned_cols=53 Identities=11% Similarity=-0.012 Sum_probs=41.3
Q ss_pred HHHHHHHHHHH-HC-CCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 209 SELERLVLERK-AK-GDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 209 ~~L~~~i~~~~-~~-~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
++|..+++.-. +. ...-.+|++|=|++..|.++|++.-++++++.|+.++.=+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 78888887654 22 2234678999999999999999988999999999886633
No 406
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=66.86 E-value=9.5 Score=37.02 Aligned_cols=93 Identities=9% Similarity=0.108 Sum_probs=57.4
Q ss_pred EecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCC-CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHH
Q psy12303 172 FTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGR-LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADIC 250 (480)
Q Consensus 172 l~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~ 250 (480)
++....|+.+.|.--+.+ .+++..++..+.+. .+.+.|-+.++....+ ..+|++ -.+.-|...+++.+.++|
T Consensus 95 l~~~~~r~T~~K~Rv~s~--nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~---~~~vVL--SDY~KG~L~~~q~~I~~a 167 (467)
T COG2870 95 LLRDKNRPTIVKLRVLSR--NQQLLRLDFEEKFPIEDENKLLEKIKNALKS---FDALVL--SDYAKGVLTNVQKMIDLA 167 (467)
T ss_pred eEeecCCCceeeeeeecc--cceEEEecccccCcchhHHHHHHHHHHHhhc---CCEEEE--eccccccchhHHHHHHHH
Confidence 344556776665433332 22677776654443 3445555555543322 345555 345689999999999999
Q ss_pred HHcCcEEEeec------cccccccccc
Q psy12303 251 QKYNMWLHVDA------AWGGGLLLSK 271 (480)
Q Consensus 251 ~~~~~~l~vD~------a~~~~~~~~~ 271 (480)
|+.|+++.+|= -|.+..+..|
T Consensus 168 r~~~~pVLvDPKg~Df~~Y~GAtLiTP 194 (467)
T COG2870 168 REAGIPVLVDPKGKDFEKYRGATLITP 194 (467)
T ss_pred HHcCCcEEECCCCcchhhhCCCeecCC
Confidence 99999999993 4555554444
No 407
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=66.76 E-value=1.1e+02 Score=28.66 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=47.3
Q ss_pred CchhHHHHHHHcCCCCCCeEEe-eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEV-PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v-~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|+++...++.+|+ ++..+ ...++....+.+|.+.++..++++ .++|+.....+. +.+..++++.|+
T Consensus 177 ~H~af~Y~~~~~gl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~la~~~g~ 244 (282)
T cd01017 177 QHAAFGYLARRYGL---KQIAIVGVSPEVEPSPKQLAELVEFVKKSD--VKYIFFEENASS-------KIAETLAKETGA 244 (282)
T ss_pred ecccHHHHHHHCCC---eEEecccCCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh-------HHHHHHHHHcCC
Confidence 68899999999998 44443 334456678888888887766665 456666554332 445567888887
Q ss_pred EE
Q psy12303 256 WL 257 (480)
Q Consensus 256 ~l 257 (480)
.+
T Consensus 245 ~v 246 (282)
T cd01017 245 KL 246 (282)
T ss_pred cE
Confidence 65
No 408
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=66.33 E-value=13 Score=35.18 Aligned_cols=63 Identities=21% Similarity=0.153 Sum_probs=45.4
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 197 EVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 197 ~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
..|.+++|.+|.+++++.++...++|..-.+++.+.|-.++=+.+.-.++.+.+.+. .+++++
T Consensus 13 vTPF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 13 VTPFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred ccCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 346677799999999999999888885555556566655655666777787777775 255554
No 409
>smart00642 Aamy Alpha-amylase domain.
Probab=63.12 E-value=19 Score=30.69 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=25.8
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|..++++++++-|+++|+.+++|-+..
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 356777889999999999999999998653
No 410
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=62.11 E-value=64 Score=29.66 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=46.5
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ ++..+- ..++....+.+|.+.++..++++ +++|+.+...+. +.+..
T Consensus 152 ~~v~---~h~~~~Y~~~~~gl---~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~--v~~i~~e~~~~~-------~~~~~ 216 (256)
T PF01297_consen 152 PVVV---YHDAFQYFAKRYGL---KVIGVIEISPGEEPSPKDLAELIKLIKENK--VKCIFTEPQFSS-------KLAEA 216 (256)
T ss_dssp EEEE---EESTTHHHHHHTT----EEEEEESSSSSSSS-HHHHHHHHHHHHHTT---SEEEEETTS-T-------HHHHH
T ss_pred eEEE---EChHHHHHHHhcCC---ceeeeeccccccCCCHHHHHHHHHHhhhcC--CcEEEecCCCCh-------HHHHH
Confidence 4555 68888999999998 444443 45566788888888887766655 446666444322 45566
Q ss_pred HHHHcCcEE
Q psy12303 249 ICQKYNMWL 257 (480)
Q Consensus 249 i~~~~~~~l 257 (480)
++++.|+.+
T Consensus 217 la~~~g~~v 225 (256)
T PF01297_consen 217 LAKETGVKV 225 (256)
T ss_dssp HHHCCT-EE
T ss_pred HHHHcCCcE
Confidence 688888775
No 411
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=61.75 E-value=1.5e+02 Score=28.09 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=64.1
Q ss_pred CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH-----HHHHHHcCCCCCCeEEeeCCC
Q psy12303 128 QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV-----RSCAAVCGLGTDNCVEVPSDK 202 (480)
Q Consensus 128 ~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~-----~~~~~~~g~~~~~v~~v~~~~ 202 (480)
.++++++|-+-|.+....+..|+++ |. +..|++.+ ++|.+ .+..+..|+ .+..|+-.
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~--------~k-----~~~V~VtE-SRP~~eG~~~ak~L~~~gI---~~~~I~Ds- 179 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADR--------GK-----RFKVIVTE-SRPRGEGRIMAKELRQSGI---PVTVIVDS- 179 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhc--------CC-----ceEEEEEc-CCCcchHHHHHHHHHHcCC---ceEEEech-
Confidence 3467999999999999999988874 21 33566654 44443 334444565 55555421
Q ss_pred CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEe
Q psy12303 203 RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHV 259 (480)
Q Consensus 203 ~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~v 259 (480)
+.-..+++. -++++....-...|.+-+ -.-|+..||+.+.++.+
T Consensus 180 -------a~~~~~~~v------d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 180 -------AVGAFMSRV------DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred -------HHHHHHHhC------CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 344455544 456666666566665543 46788889999999876
No 412
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=61.35 E-value=1.2e+02 Score=30.79 Aligned_cols=71 Identities=13% Similarity=0.063 Sum_probs=49.1
Q ss_pred CchhHHHHHHHcCCCCCCeEE-eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVE-VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~-v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|.++...++.+|+ ++.. +..+++....+.+|.+.++.-++++ .++|+.+.-.+. ..+.+..++++.|+
T Consensus 377 ~H~af~YLa~~YGL---~~~~~~~~~~~~ePS~~~L~~Li~~IK~~~--V~~IF~Epq~~~-----~~~~l~~IA~e~Gv 446 (479)
T TIGR03772 377 THDAYSYLGQAYGL---NIAGFVTPNPAVEPSLADRRRLTRTIENLK--VPAVFLEPNLAA-----RSTTLNEIADELGV 446 (479)
T ss_pred ECCcHHHHHHHCCC---eEEeeeccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCC-----chHHHHHHHHHcCC
Confidence 68899999999998 4332 3345566778888888887766554 556666544332 34567888999988
Q ss_pred EE
Q psy12303 256 WL 257 (480)
Q Consensus 256 ~l 257 (480)
.+
T Consensus 447 ~V 448 (479)
T TIGR03772 447 RV 448 (479)
T ss_pred cE
Confidence 65
No 413
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=61.21 E-value=21 Score=33.76 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=36.6
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
...|.+++|++|.+.+++.++...+.|..-.++..+.|....=+.+.-.++.+.+.+.
T Consensus 13 ~vTPf~~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 13 PVTPFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 4457788899999999999998888775543333333333333334445555555443
No 414
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=60.96 E-value=22 Score=33.39 Aligned_cols=59 Identities=19% Similarity=0.167 Sum_probs=37.4
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
....|.++++.+|.+.+++.++...+.|..-.++..+.|....=+.+.-.++.+++.++
T Consensus 7 ~~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 7 ALVTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 34567788999999999999998888775543444333333322334455566655554
No 415
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=60.23 E-value=23 Score=33.48 Aligned_cols=56 Identities=23% Similarity=0.155 Sum_probs=36.3
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
.....|.++++.+|.+.+++.++...+.|..-.++. |++--+.... -.++.+.+.+
T Consensus 7 ~~~~TPf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~---Gs~GE~~~ls~~Er~~~~~~~~~ 65 (292)
T PRK03170 7 TALVTPFKEDGSVDFAALRKLVDYLIANGTDGLVVV---GTTGESPTLTHEEHEELIRAVVE 65 (292)
T ss_pred eeeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEEC---CcCCccccCCHHHHHHHHHHHHH
Confidence 345567788999999999999998888775543333 4444444433 4445554444
No 416
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=60.00 E-value=82 Score=31.12 Aligned_cols=133 Identities=16% Similarity=0.159 Sum_probs=76.6
Q ss_pred EEEecCCCchh-HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc--------ccc
Q psy12303 170 VMFTSDQCHYS-VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL--------GAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s-~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~--------G~~ 240 (480)
++|++..+-.. +.--++.+|+...++...+ ..+++++.+.+++. +|.++++...+|.. |++
T Consensus 123 vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-----Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~SapGsV 192 (456)
T COG1066 123 VLYVSGEESLQQIKLRADRLGLPTNNLYLLA-----ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSAPGSV 192 (456)
T ss_pred EEEEeCCcCHHHHHHHHHHhCCCccceEEeh-----hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCCCCcH
Confidence 88888766544 4445567776544443333 24888888888774 38888888777654 433
Q ss_pred cC----hHHHHHHHHHcCcEEEe------eccccccccccccccC-cccCCCCCCccceeCccccCCCcc-cceEEEEeC
Q psy12303 241 DP----IEEIADICQKYNMWLHV------DAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQ 308 (480)
Q Consensus 241 ~~----l~~I~~i~~~~~~~l~v------D~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~ 308 (480)
.- -.++.++||+.|++++. ||+-+|+...-...+. -.+.|-.+..+=..-.+|.=+++. -.|++-+.+
T Consensus 193 sQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vKNRFG~t~EiGvFeM~~ 272 (456)
T COG1066 193 SQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVKNRFGATNELGVFEMTE 272 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhcccCCcccceeEEEEec
Confidence 22 36788899999987655 4444444331110000 011221123333444567666554 467777776
Q ss_pred chhh
Q psy12303 309 DGLL 312 (480)
Q Consensus 309 ~~~~ 312 (480)
..+.
T Consensus 273 ~GL~ 276 (456)
T COG1066 273 NGLR 276 (456)
T ss_pred CCee
Confidence 6544
No 417
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=58.34 E-value=27 Score=32.67 Aligned_cols=61 Identities=18% Similarity=0.065 Sum_probs=38.4
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~---~~~l~v 259 (480)
...|.++++.+|.+.+++.++...+.|..-.+ ..|++--+.... -.++.+.+.+. ++.+++
T Consensus 5 ~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~---~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 5 LVTPFTADGEVDLDALRRLVEFLIEAGVDGLV---VLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEE---ECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45678889999999999999988777754333 344444454444 34455544443 355544
No 418
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=58.01 E-value=13 Score=31.47 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC--cEEEeecccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN--MWLHVDAAWGGG 266 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~--~~l~vD~a~~~~ 266 (480)
|..+++++++.. ...|++ -+|.+.+++++.+..|++| +++|+|-..|..
T Consensus 12 ~~~~le~~les~------~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESE------SQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCC------CeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 566788888765 444444 2577889999999999986 789999888765
No 419
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=57.83 E-value=25 Score=33.19 Aligned_cols=65 Identities=20% Similarity=0.267 Sum_probs=38.9
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHH-CCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKA-KGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~-~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
....|.++++.+|.+.+++.++...+ .|..-.++..+.|....=+.+.-.++.+.+.++ ++.+++
T Consensus 10 a~~TPf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~via 78 (293)
T PRK04147 10 ALLTPFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIA 78 (293)
T ss_pred eeECcCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEe
Confidence 34557788999999999999998887 775543333333332222333344455555443 355554
No 420
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=57.67 E-value=1.6e+02 Score=27.31 Aligned_cols=104 Identities=18% Similarity=0.176 Sum_probs=59.8
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHH
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSEL 211 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L 211 (480)
-++.+|+|.++=.++.-...+ +| ..+|++.....--..-+.++......++..+++|=. +++++
T Consensus 8 ~~lITGASsGIG~~~A~~lA~-------~g------~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs---~~~~~ 71 (265)
T COG0300 8 TALITGASSGIGAELAKQLAR-------RG------YNLILVARREDKLEALAKELEDKTGVEVEVIPADLS---DPEAL 71 (265)
T ss_pred EEEEECCCchHHHHHHHHHHH-------CC------CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC---ChhHH
Confidence 455566776665444322221 23 448888876654333333333222226667777632 56777
Q ss_pred HHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHH
Q psy12303 212 ERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQ 251 (480)
Q Consensus 212 ~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~ 251 (480)
++..++...++...-+++=++|....|.+ .+++++.++.+
T Consensus 72 ~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 72 ERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred HHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHH
Confidence 77776666665667788888887777755 34555555443
No 421
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=57.58 E-value=1.7e+02 Score=27.49 Aligned_cols=69 Identities=14% Similarity=0.029 Sum_probs=47.8
Q ss_pred CchhHHHHHHHcCCCCCCeEE-eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVE-VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~-v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|.++...++.+|+ +++. +....+...++.+|.+.++..++++ ..+|+.....+ =+.+..|+++.|+
T Consensus 185 ~H~af~Yl~~~~gl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~-------~~~~~~ia~~~g~ 252 (286)
T cd01019 185 FHDAYGYFEKRYGL---TQAGVFTIDPEIDPGAKRLAKIRKEIKEKG--ATCVFAEPQFH-------PKIAETLAEGTGA 252 (286)
T ss_pred ecccHHHHHHHcCC---ceeeeecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEecCCCC-------hHHHHHHHHhcCc
Confidence 78899999999998 4333 3344557788998888888766555 55666544432 2567777888886
Q ss_pred EE
Q psy12303 256 WL 257 (480)
Q Consensus 256 ~l 257 (480)
.+
T Consensus 253 ~v 254 (286)
T cd01019 253 KV 254 (286)
T ss_pred eE
Confidence 55
No 422
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=57.10 E-value=27 Score=32.93 Aligned_cols=61 Identities=16% Similarity=0.090 Sum_probs=37.8
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCC-CccEEEEeccCCCccccccCh---HHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKG-DIPFFVNCTSGTTVLGAFDPI---EEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~~l---~~I~~i~~~~---~~~l~v 259 (480)
...|.++++++|.+.+++.++...+.| ..- ++..|+|-.+..... .++.+.+.+. ++++++
T Consensus 8 ~~TPf~~dg~iD~~~~~~~i~~~i~~G~v~g---i~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 75 (290)
T TIGR00683 8 LLVSFNEDGTINEKGLRQIIRHNIDKMKVDG---LYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 75 (290)
T ss_pred eecCCCCCCCcCHHHHHHHHHHHHhCCCcCE---EEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445778899999999999999887776 443 233455444444444 4444444443 355544
No 423
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=56.64 E-value=26 Score=30.69 Aligned_cols=48 Identities=19% Similarity=0.156 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 210 ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 210 ~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
.-|.+++=..-.|..|..|++... +..|...+.+++.+++++|++.++
T Consensus 138 htEaavdLa~lAGl~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 138 HTEAAVDLARLAGLSPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp HHHHHHHHHHHTTS-SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEE
T ss_pred hHHHHHHHHHHhCCCCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 345555555567888988888887 559999999999999999999875
No 424
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=56.23 E-value=31 Score=32.60 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=34.5
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC 250 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~ 250 (480)
....|.+++|++|.+.+++.++...+.|..-.++ .|+|--+.... -.++.+.+
T Consensus 7 a~~TPf~~dg~iD~~~l~~lv~~~~~~Gv~gi~v---~GstGE~~~Ls~~Er~~l~~~~ 62 (294)
T TIGR02313 7 PLITPFKRNGDIDEEALRELIEFQIEGGSHAISV---GGTSGEPGSLTLEERKQAIENA 62 (294)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEE---CccCcccccCCHHHHHHHHHHH
Confidence 3456778899999999999999888877553333 34444444444 34444443
No 425
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=55.74 E-value=28 Score=33.12 Aligned_cols=61 Identities=10% Similarity=-0.057 Sum_probs=37.6
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~---~~~l~v 259 (480)
...|.++++++|.+.+++.++...++|.. .|+ ..|+|--+.... -.++.+.+.+. ++++++
T Consensus 15 ~vTPf~~dg~iD~~~l~~li~~l~~~Gv~--Gi~-~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 15 PVTPFDADGSFDEAAYREHLEWLAPYGAA--ALF-AAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred eeCCCCCCCCcCHHHHHHHHHHHHHcCCC--EEE-ECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44567788999999999999988777744 333 234443444333 34455544443 356665
No 426
>PLN02417 dihydrodipicolinate synthase
Probab=55.33 E-value=32 Score=32.29 Aligned_cols=64 Identities=17% Similarity=0.154 Sum_probs=38.5
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
...|.++++.+|.+.+++.++...+.|..-.++..+.|...+=+.+.-.++.+.+.+. ++++++
T Consensus 9 ~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~ 75 (280)
T PLN02417 9 IKTPYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIG 75 (280)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4457788899999999999998888775533333333333333333444555544443 355543
No 427
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=54.93 E-value=39 Score=31.77 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=35.7
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
....|.+++|.+|.+.+++.++...+.|..-.++..+.|....=+.+.-.++.+.+.+.
T Consensus 5 a~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 5 ALITPFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred ceeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 34567888999999999999998877775543333333322222223344555554443
No 428
>PLN02672 methionine S-methyltransferase
Probab=54.10 E-value=1.6e+02 Score=33.35 Aligned_cols=154 Identities=10% Similarity=0.014 Sum_probs=89.7
Q ss_pred HhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 87 SMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
..++.+.+..-+...+.|+.-.+...+...+...+..+++.| ++++++.++-..|+..+++..--+. . +.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~------ 476 (1082)
T PLN02672 405 PFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRL-A-IV------ 476 (1082)
T ss_pred cHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHH-H-hh------
Confidence 344444444444455666655566778888888888888874 5789999999998887776542210 0 00
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCC-----CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLG-----TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~-----~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
| .- .+..-+..|..+...-|.+ .+.+..+. .+ .+-| .+.+.|++- +|.+|+........-+
T Consensus 477 ---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~ 542 (1082)
T PLN02672 477 ---D-EH-LTRWLPKKWLTSLAIENATSDSKSDDVITVIE-AP-RQSD--LVIELIKKL-----KPQVVVTGMADFEMRT 542 (1082)
T ss_pred ---h-hh-hhccCCHHHHhHhhhhcccccCccCCeEEEEe-CC-Ccch--HHHHHHHhC-----CCeEEEEeccchhhhh
Confidence 0 00 1222344455544444321 11222221 11 1122 456666654 3777777666544444
Q ss_pred ccChHHHHHHHHHcCcEEEeecc
Q psy12303 240 FDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 240 ~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..-++.|.+.+++.|+|++.|..
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 543 STAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHHHHHHHhhCcEEEEehh
Confidence 45689999999999999999974
No 429
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=54.00 E-value=2e+02 Score=27.37 Aligned_cols=70 Identities=9% Similarity=-0.010 Sum_probs=48.4
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcE
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMW 256 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~ 256 (480)
.|.++...++.+|+.. +-.+...++...++.+|.+.++..++++ .++|+.....++ +.+..++++.|+.
T Consensus 209 ~H~af~Yf~~~ygl~~--~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~~-------~~~~~la~e~g~~ 277 (311)
T PRK09545 209 FHDAYGYFEKHYGLTP--LGHFTVNPEIQPGAQRLHEIRTQLVEQK--ATCVFAEPQFRP-------AVIESVAKGTSVR 277 (311)
T ss_pred ECchHHHHHHhCCCce--eeeeccCCCCCCCHHHHHHHHHHHHHcC--CCEEEecCCCCh-------HHHHHHHHhcCCe
Confidence 7899999999999842 1223444556778888888888766655 557776544332 5667778888876
Q ss_pred E
Q psy12303 257 L 257 (480)
Q Consensus 257 l 257 (480)
+
T Consensus 278 v 278 (311)
T PRK09545 278 M 278 (311)
T ss_pred E
Confidence 5
No 430
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=54.00 E-value=2.2e+02 Score=27.65 Aligned_cols=119 Identities=16% Similarity=0.075 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCCC---CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch------hHHHH
Q psy12303 114 ETVVLEKMRQIIGWQ---GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY------SVRSC 184 (480)
Q Consensus 114 e~~~~~~la~~~g~~---~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~------s~~~~ 184 (480)
++++.+.+.++-... .+.++-.|||-.+...+..+... .|+ +..++.-+..+. .+.+.
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~--------~gl-----~~l~vt~~~~~~~e~~~~n~~~~ 108 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKK--------LGL-----NPLLVTVDPGWNTELGVKNLNNL 108 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHH--------hCC-----ceEEEEECCCCCCHHHHHHHHHH
Confidence 444444454444332 34588999999988876444322 232 223233222222 24555
Q ss_pred HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcCcEEEeecc
Q psy12303 185 AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~~~l~vD~a 262 (480)
++.+|+ ....+.+ |.+.+.+.......+. .+++... .....+.++|+++|+.+++.|-
T Consensus 109 ~~~lgv---d~~~i~~------d~~~~~~l~~~~~~~~-----------~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 109 IKKLGF---DLHTITI------NPETFRKLQRAYFKKV-----------GDPEWPQDHAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred HHHcCC---CeEEEeC------CHHHHHHHHHHHHhcc-----------CCCchhhhhHHHHHHHHHHHHhCCCEEEeCC
Confidence 666777 5555554 4555555554432111 1122211 2357888999999999999986
Q ss_pred ccc
Q psy12303 263 WGG 265 (480)
Q Consensus 263 ~~~ 265 (480)
.+.
T Consensus 169 ~~d 171 (343)
T TIGR03573 169 NIA 171 (343)
T ss_pred CHH
Confidence 554
No 431
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=53.79 E-value=51 Score=29.60 Aligned_cols=76 Identities=13% Similarity=0.066 Sum_probs=42.4
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA 247 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~ 247 (480)
..++++... .......++..|. +++..+.+ |.+.|.++++.. -.|++..+........--..+.
T Consensus 24 ~V~~l~R~~-~~~~~~~l~~~g~---~vv~~d~~-----~~~~l~~al~g~-------d~v~~~~~~~~~~~~~~~~~li 87 (233)
T PF05368_consen 24 SVRALVRDP-SSDRAQQLQALGA---EVVEADYD-----DPESLVAALKGV-------DAVFSVTPPSHPSELEQQKNLI 87 (233)
T ss_dssp CEEEEESSS-HHHHHHHHHHTTT---EEEES-TT------HHHHHHHHTTC-------SEEEEESSCSCCCHHHHHHHHH
T ss_pred CcEEEEecc-chhhhhhhhcccc---eEeecccC-----CHHHHHHHHcCC-------ceEEeecCcchhhhhhhhhhHH
Confidence 434555443 3333444555666 66555544 889999999753 2344444433333344467889
Q ss_pred HHHHHcCcEEEe
Q psy12303 248 DICQKYNMWLHV 259 (480)
Q Consensus 248 ~i~~~~~~~l~v 259 (480)
+.|++.|+..++
T Consensus 88 ~Aa~~agVk~~v 99 (233)
T PF05368_consen 88 DAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHT-SEEE
T ss_pred HhhhccccceEE
Confidence 999999876554
No 432
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=53.01 E-value=36 Score=29.93 Aligned_cols=47 Identities=23% Similarity=0.123 Sum_probs=37.3
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
-|..++=.+-.|..|..|++... +..|.....+++.++|++|++.++
T Consensus 144 TEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 144 TEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred HHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 45555555556777888887776 568999999999999999999874
No 433
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=52.59 E-value=89 Score=29.66 Aligned_cols=60 Identities=20% Similarity=0.163 Sum_probs=41.4
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeeccccc
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.++.+++++.++.-...-. ..-+++-+|+-|.|.- +...++.++|++.|+.+++|.....
T Consensus 110 ~is~~~~~~~l~~~~~~l~-~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 110 EISEAELEQFLEQLKALLE-SDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred CCCHHHHHHHHHHHHHhcc-cCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHH
Confidence 5777777776665433111 1223555677888876 4479999999999999999985433
No 434
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=51.58 E-value=12 Score=39.11 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=34.7
Q ss_pred EEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 228 VNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 228 v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
+..=++++..|..++++++++-|+++||-|++|-+++-+.
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 4444688999999999999999999999999999987653
No 435
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=51.38 E-value=38 Score=26.95 Aligned_cols=48 Identities=29% Similarity=0.235 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEee
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVD 260 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD 260 (480)
.++++++++.++.. |.+|++ ||-..|...+-+++.+..+++|+-+.+-
T Consensus 45 ~l~~~~l~~ll~~~------peivli--GTG~~~~~~~~~~~~~~l~~~Gi~ve~m 92 (117)
T cd05126 45 GLQPEELEELLEEG------VEVIVI--GTGQSGALKVPPETVEKLEKRGVEVLVL 92 (117)
T ss_pred cCCHHHHHHHHhcC------CCEEEE--cCCCCccccCCHHHHHHHHhcCCEEEEc
Confidence 57899999999875 777777 6556677666788888999999987763
No 436
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=51.37 E-value=43 Score=31.53 Aligned_cols=62 Identities=26% Similarity=0.275 Sum_probs=38.2
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHC-CCccEEEEeccCCCccccccC---hHHHHHHHHHc---CcEEEe
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAK-GDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY---NMWLHV 259 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~---~~~l~v 259 (480)
....|.+++|.+|.+.+++.++...+. |..-.++. |++--+.... -.++.+.+.+. ++.+++
T Consensus 7 a~~TPf~~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~---GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 7 ALLTPFDENGEINEDVLRAIVDYLIEKQGVDGLYVN---GSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred ceECCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC---cCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 345677889999999999999988777 75533333 3333344434 34455544443 355555
No 437
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=51.08 E-value=29 Score=32.64 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=35.9
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
...|.++++.+|.+.+++.++-..+.|..-.++..+.|....=+.+.-.++.+++.++ ++++++
T Consensus 9 ~~TPf~~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 9 LITPFNADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp E---BETTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred eeCCCCCCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 3446677899999999999988887776543333333333322334445566665543 456655
No 438
>KOG2865|consensus
Probab=50.53 E-value=1.2e+02 Score=28.48 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=42.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cC-----hHHHHHHHHHcCc--EEEeec
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DP-----IEEIADICQKYNM--WLHVDA 261 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~-----l~~I~~i~~~~~~--~l~vD~ 261 (480)
+|.+.+.| ..|.+.++++++.. -..|.+..-..+|+.+ .| -++|+.|||+.|+ ++|+-+
T Consensus 110 Qvl~~~fd---~~DedSIr~vvk~s------NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~ 177 (391)
T KOG2865|consen 110 QVLFMKFD---LRDEDSIRAVVKHS------NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSC 177 (391)
T ss_pred ceeeeccC---CCCHHHHHHHHHhC------cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhh
Confidence 67777766 35999999998875 3345555555667765 23 3899999999987 677754
No 439
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=49.39 E-value=1.4e+02 Score=27.43 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=52.3
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCCCC-CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccc----cccChHHHHHHHH
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDKRG-RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLG----AFDPIEEIADICQ 251 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~~~-~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G----~~~~l~~I~~i~~ 251 (480)
.+..+.+++...|. .+.+ ++| -.++++++.+++.-.+.|. ..++++.-+++... ...++..|..+.+
T Consensus 110 ~n~~LL~~va~tgk----PVil---k~G~~~t~~e~~~A~e~i~~~Gn-~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~ 181 (250)
T PRK13397 110 QNFEFLKTLSHIDK----PILF---KRGLMATIEEYLGALSYLQDTGK-SNIILCERGVRGYDVETRNMLDIMAVPIIQQ 181 (250)
T ss_pred cCHHHHHHHHccCC----eEEE---eCCCCCCHHHHHHHHHHHHHcCC-CeEEEEccccCCCCCccccccCHHHHHHHHH
Confidence 34445555544443 2333 334 5789999999988776664 23333321432222 2456888888888
Q ss_pred HcCcEEEeeccccccc
Q psy12303 252 KYNMWLHVDAAWGGGL 267 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~ 267 (480)
+.++++++|-.|++|.
T Consensus 182 ~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 182 KTDLPIIVDVSHSTGR 197 (250)
T ss_pred HhCCCeEECCCCCCcc
Confidence 8999999999998774
No 440
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=49.33 E-value=2.2e+02 Score=26.36 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=52.7
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCCCCC-CCHHHHHHHHHHHHHCCCccEEEEeccCCCcc-cc---ccChHHHHHHHH
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDKRGR-LIPSELERLVLERKAKGDIPFFVNCTSGTTVL-GA---FDPIEEIADICQ 251 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~-G~---~~~l~~I~~i~~ 251 (480)
.+..+.+.+...|. . +.+ ++|. .++++++.+++.....|.. .++++..|++.. +. ..++..|..+.+
T Consensus 120 ~n~~LL~~~a~~gk---P-Vil---k~G~~~t~~e~~~Ave~i~~~Gn~-~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~ 191 (260)
T TIGR01361 120 QNFELLKEVGKQGK---P-VLL---KRGMGNTIEEWLYAAEYILSSGNG-NVILCERGIRTFEKATRNTLDLSAVPVLKK 191 (260)
T ss_pred cCHHHHHHHhcCCC---c-EEE---eCCCCCCHHHHHHHHHHHHHcCCC-cEEEEECCCCCCCCCCcCCcCHHHHHHHHH
Confidence 34445555544443 2 233 2343 4899999999887766643 333333344322 43 357899999998
Q ss_pred HcCcEEEeecccccc
Q psy12303 252 KYNMWLHVDAAWGGG 266 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~ 266 (480)
.++.++.+|..|+++
T Consensus 192 ~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 192 ETHLPIIVDPSHAAG 206 (260)
T ss_pred hhCCCEEEcCCCCCC
Confidence 889999999999876
No 441
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=48.17 E-value=48 Score=29.60 Aligned_cols=46 Identities=24% Similarity=0.098 Sum_probs=34.6
Q ss_pred HHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 212 ERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 212 ~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
|..++=.+-.|..|..|++... +..|.....+++.++|++||+.++
T Consensus 156 EaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 156 EGTVDLMQMAGLQPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred HHHHHHHHHcCCCceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEE
Confidence 4444444446777877777775 567999999999999999998873
No 442
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=47.29 E-value=20 Score=29.07 Aligned_cols=47 Identities=23% Similarity=0.251 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.++.+.-++.+++--.. .+-||+++.+. .+-+++.++|+++++++..
T Consensus 64 ~l~~~~r~~~l~~l~~~--~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSY--NPPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCTT--T-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhCC--CCCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 57777777777654332 25678887775 5789999999999998865
No 443
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=46.59 E-value=1.5e+02 Score=27.72 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=47.6
Q ss_pred CchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|+++...++.+|+ +...+. ..++...++.+|.+.++..++++ .++|+.+.-.+. -.++.|.+.++..|+
T Consensus 167 ~H~af~Y~~~~ygl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~----~~~~~l~~~~~~~~~ 237 (276)
T cd01016 167 AHDAFGYFGRAYGF---EVKGLQGISTDSEAGLRDINELVDLIVERK--IKAIFVESSVNQ----KSIEALQDAVKARGH 237 (276)
T ss_pred ecCcHHHHHHHcCC---eEecCcCCCcccCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCH----HHHHHHHHHHhhcCC
Confidence 68899999999998 444332 23455677888888887766655 456665444322 245677777777765
Q ss_pred EEEe
Q psy12303 256 WLHV 259 (480)
Q Consensus 256 ~l~v 259 (480)
.+.+
T Consensus 238 ~v~~ 241 (276)
T cd01016 238 DVQI 241 (276)
T ss_pred cccc
Confidence 4433
No 444
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=46.26 E-value=52 Score=29.57 Aligned_cols=45 Identities=18% Similarity=0.004 Sum_probs=33.2
Q ss_pred HHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE
Q psy12303 212 ERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL 257 (480)
Q Consensus 212 ~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l 257 (480)
|..++=.+-.|..|..|++..- +..|.....+++.++|++|++.+
T Consensus 160 EAavdLa~lAGl~P~~vicEil-~~dG~ma~~~~l~~fA~~~~l~i 204 (230)
T PRK00014 160 EGSVDLAALAGLRPAGVLCELM-NADGTMMRGASLERYAAKEGLVA 204 (230)
T ss_pred HHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcE
Confidence 3444433445666777777764 66799999999999999999887
No 445
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=45.64 E-value=55 Score=29.33 Aligned_cols=45 Identities=20% Similarity=0.095 Sum_probs=35.5
Q ss_pred HHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE
Q psy12303 212 ERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL 257 (480)
Q Consensus 212 ~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l 257 (480)
|.+++=.+-.|..|.+|++... +..|...+.+++.++|++||+.+
T Consensus 155 EaavdLa~lAgl~P~avi~ei~-~~~G~~~~~~~~~~fA~~~~l~~ 199 (217)
T PRK03353 155 EATIDLMTLAGLKPAGVLCELT-NDDGTMARAPECIAFAKQHNMPV 199 (217)
T ss_pred HHHHHHHHHcCCCceEEEEEee-cCCCCcccHHHHHHHHHHcCCcE
Confidence 4555555556777888877765 56799999999999999999987
No 446
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=45.18 E-value=56 Score=29.09 Aligned_cols=47 Identities=19% Similarity=0.134 Sum_probs=35.9
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
-|..++=.+-.|..|..|++..- +..|.....+++.++|++||+.++
T Consensus 154 TEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 154 TEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred HHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 45555544556777877777775 567999999999999999999874
No 447
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.84 E-value=47 Score=31.64 Aligned_cols=57 Identities=16% Similarity=0.054 Sum_probs=35.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 203 RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 203 ~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
+|.+|.+.+++.++...+.|..-.++..+.|...+=+.+.-.++.+.+.+. ++.+++
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~ 82 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFV 82 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 389999999999999888775544444444433333334455565555443 355554
No 448
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=44.31 E-value=2.4e+02 Score=25.29 Aligned_cols=103 Identities=19% Similarity=0.197 Sum_probs=53.1
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE-e--cC---------CCchhHHHHHHHcCCCCCCeEEee
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF-T--SD---------QCHYSVRSCAAVCGLGTDNCVEVP 199 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl-~--~~---------~~h~s~~~~~~~~g~~~~~v~~v~ 199 (480)
++..|||-.+...+..+... |. +.+.+ + +. .........++.+|+ ++..++
T Consensus 1 ~vl~SGGkDS~~al~~a~~~---------G~-----~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgi---p~~~i~ 63 (218)
T TIGR03679 1 AALYSGGKDSNYALYKALEE---------GH-----EVRCLITVVPENEESYMFHTPNIELTRLQAEALGI---PLVKIE 63 (218)
T ss_pred CeeecCcHHHHHHHHHHHHc---------CC-----EEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCC---CEEEEE
Confidence 35778999988877655432 22 21112 2 11 122345567777787 566666
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE
Q psy12303 200 SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL 257 (480)
Q Consensus 200 ~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l 257 (480)
++.......+.|.+++.+..+.| ...|+. |.+.. -++-..+-.+|++.|+.+
T Consensus 64 ~~~~~~~~~~~l~~~l~~~~~~g--~~~vv~--G~i~s--d~~~~~~e~v~~~~gl~~ 115 (218)
T TIGR03679 64 TSGEKEKEVEDLKGALKELKREG--VEGIVT--GAIAS--RYQKSRIERICEELGLKV 115 (218)
T ss_pred CCCCChHHHHHHHHHHHHHHHcC--CCEEEE--CCccc--HhHHHHHHHHHHhCCCeE
Confidence 55211223455777777665544 223332 22221 123455667777766654
No 449
>KOG0369|consensus
Probab=44.23 E-value=83 Score=32.92 Aligned_cols=32 Identities=28% Similarity=0.517 Sum_probs=28.4
Q ss_pred ccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 238 GAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 238 G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
|-+..++|-.+.|++||.++|+-+||||+..-
T Consensus 168 gPitt~~EA~eF~k~yG~PvI~KAAyGGGGRG 199 (1176)
T KOG0369|consen 168 GPITTVEEALEFVKEYGLPVIIKAAYGGGGRG 199 (1176)
T ss_pred CCcccHHHHHHHHHhcCCcEEEeecccCCCcc
Confidence 66677899999999999999999999998753
No 450
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.07 E-value=71 Score=25.43 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=46.1
Q ss_pred cCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCC---HHHHHHHHHHHHHCCCccEEEEeccCCCccccc--------cC
Q psy12303 174 SDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLI---PSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--------DP 242 (480)
Q Consensus 174 ~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d---~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--------~~ 242 (480)
+.+...++..+++.+|+ .+.+||+... .++ ++++.+++.+. ..|.+..+-.|+-.+-.. .+
T Consensus 43 ~QP~~~~i~~aa~~aGl---~y~~iPV~~~-~iT~~dV~~f~~Al~ea----egPVlayCrsGtRs~~ly~~~~~~~gm~ 114 (130)
T COG3453 43 GQPGFAAIAAAAEAAGL---TYTHIPVTGG-GITEADVEAFQRALDEA----EGPVLAYCRSGTRSLNLYGLGELDGGMS 114 (130)
T ss_pred CCCChHHHHHHHHhcCC---ceEEeecCCC-CCCHHHHHHHHHHHHHh----CCCEEeeecCCchHHHHHHHHHHhcCCC
Confidence 44556678888888998 7889998653 344 44555555554 237666665554332211 35
Q ss_pred hHHHHHHHHHcCc
Q psy12303 243 IEEIADICQKYNM 255 (480)
Q Consensus 243 l~~I~~i~~~~~~ 255 (480)
.++|.++.+.+|+
T Consensus 115 ~de~~a~g~a~G~ 127 (130)
T COG3453 115 RDEIEALGQAAGF 127 (130)
T ss_pred HHHHHHHHHhhCc
Confidence 6777777777764
No 451
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=44.04 E-value=67 Score=28.13 Aligned_cols=70 Identities=21% Similarity=0.243 Sum_probs=42.6
Q ss_pred hHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcCcE
Q psy12303 180 SVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYNMW 256 (480)
Q Consensus 180 s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~~~ 256 (480)
+++.++.++ .+|...+.+.|.. |.-.+++|+...+...++|.. + -|||-+ +++++|.++|.+.|+.
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~--Gl~~leE~~avAkA~a~~g~~-----l----EPTGGIdl~N~~~I~~i~l~aGv~ 204 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG--GLKHLEELKAVAKACARNGFT-----L----EPTGGIDLDNFEEIVKICLDAGVE 204 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T--TTTTHHHHHHHHHHHHHCT-E-----E----EEBSS--TTTHHHHHHHHHHTT-S
T ss_pred cHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCce-----e----CCcCCcCHHHHHHHHHHHHHcCCC
Confidence 466666665 3555577888875 444678888888777666532 2 467876 6899999999999976
Q ss_pred EEee
Q psy12303 257 LHVD 260 (480)
Q Consensus 257 l~vD 260 (480)
.++=
T Consensus 205 ~viP 208 (218)
T PF07071_consen 205 KVIP 208 (218)
T ss_dssp -B--
T ss_pred eecc
Confidence 5543
No 452
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=42.56 E-value=38 Score=30.86 Aligned_cols=29 Identities=21% Similarity=0.107 Sum_probs=24.7
Q ss_pred ccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 240 FDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 240 ~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
.-.-+++.++.+++++-++||+.|-....
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATHPyAa~ 80 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATHPYAAR 80 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCChHHHH
Confidence 34579999999999999999999976554
No 453
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=40.61 E-value=58 Score=30.15 Aligned_cols=52 Identities=27% Similarity=0.330 Sum_probs=39.1
Q ss_pred CCccccccChHHHHHHHHHcCc--EEEe-eccccccccccccccCcccCCCCCCccceeCccccCC
Q psy12303 234 TTVLGAFDPIEEIADICQKYNM--WLHV-DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG 296 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~--~l~v-D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~ 296 (480)
+|+-|.++.-.+|+.+.+++.. .++| +-|.++|.+.+ . .+|-+.++++-.+|
T Consensus 98 ~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIA----L-------aADeIvM~p~a~LG 152 (285)
T PF01972_consen 98 HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIA----L-------AADEIVMGPGAVLG 152 (285)
T ss_pred ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHH----H-------hCCeEEECCCCccC
Confidence 5888999999999999999853 3333 56777776532 1 67888888888877
No 454
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=40.14 E-value=1.9e+02 Score=27.07 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC------------hHHHHHHHHHcCcEE
Q psy12303 206 LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP------------IEEIADICQKYNMWL 257 (480)
Q Consensus 206 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~------------l~~I~~i~~~~~~~l 257 (480)
.|++.+++.+++.+ |-+|+-++..|..-.... ...|+++|++.|+++
T Consensus 37 td~~~v~~~i~~~~-----PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~l 95 (281)
T COG1091 37 TDPDAVLEVIRETR-----PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARL 95 (281)
T ss_pred cChHHHHHHHHhhC-----CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeE
Confidence 47888999998763 778888887766555432 255889999999865
No 455
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=39.77 E-value=18 Score=34.04 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=27.9
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
+....|+.++++++++.|+++|+.|++|-+..-
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH 76 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPNH 76 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETSE
T ss_pred cccccchhhhhhhhhhccccccceEEEeeeccc
Confidence 455678888899999999999999999987653
No 456
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=37.63 E-value=1.5e+02 Score=25.28 Aligned_cols=57 Identities=23% Similarity=0.227 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCC-------------ccccccChHHHHHHHHHcCcEEEee
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTT-------------VLGAFDPIEEIADICQKYNMWLHVD 260 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~-------------~~G~~~~l~~I~~i~~~~~~~l~vD 260 (480)
..++.++.++.++.-++-|..+.+|.-+.-.. ..+..++|+.+.+.|+++|+.|++-
T Consensus 15 ~~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 15 QNWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 35788888888888777776665544332211 1133468999999999999999873
No 457
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.22 E-value=3.3e+02 Score=26.52 Aligned_cols=62 Identities=16% Similarity=0.126 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCC-----CccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGT-----TVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-----~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
..+++++..+++.-...|. ..++++.-|. +.+=...|+..|..+.+..++++++|..|+.|.
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn-~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGN-PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCHHHHHHHHHHHHHcCC-CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 3489999999988766654 3444444432 122244679999999778899999999998864
No 458
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=37.11 E-value=1.6e+02 Score=27.06 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=44.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc---ccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 201 DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA---FDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 201 ~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.....+.++++..+++.....|. +.++++.=|.+. |. +.|+..|.-+. +.+.++++|..|+.
T Consensus 122 KrG~~~t~~e~l~aaeyi~~~Gn-~~viLcERG~tf-~y~r~~~D~~~ip~~k-~~~~PVi~DpSHsv 186 (258)
T TIGR01362 122 KKGQFLSPWDMKNVVEKVLSTGN-KNILLCERGTSF-GYNNLVVDMRSLPIMR-ELGCPVIFDATHSV 186 (258)
T ss_pred cCCCcCCHHHHHHHHHHHHHcCC-CcEEEEeCCCCc-CCCCcccchhhhHHHH-hcCCCEEEeCCccc
Confidence 34446889988888877666553 567788888754 65 45777777554 45899999999973
No 459
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=36.84 E-value=27 Score=35.72 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=27.5
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
..+..|+.++++++++.|+++|+.+++|.+.-
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34567888899999999999999999999644
No 460
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=36.75 E-value=1.2e+02 Score=27.98 Aligned_cols=77 Identities=5% Similarity=-0.003 Sum_probs=49.9
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEe----eCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEV----PSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIE 244 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v----~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~ 244 (480)
.+++ .|+++...++.+|+ +++.+ ... .+....+.+|.+.++..++++ ..+|+.+...+. ..++
T Consensus 155 ~~v~---~H~af~Y~~~~yGl---~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~--v~~if~e~~~~~----k~~~ 222 (264)
T cd01020 155 PVAA---TEPVFDYLLDALGM---KERTPKGYTATTESETEPSPADIAAFQNAIKNRQ--IDALIVNPQQAS----SATT 222 (264)
T ss_pred eEEE---eCchHHHHHHHCCC---cccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCC--CCEEEeCCCCCc----HHHH
Confidence 4555 68999999999998 43321 112 355678888888777665544 456665444322 2345
Q ss_pred HHHHHHHHcCcEEE
Q psy12303 245 EIADICQKYNMWLH 258 (480)
Q Consensus 245 ~I~~i~~~~~~~l~ 258 (480)
.|..++++.|+.+.
T Consensus 223 ~l~~la~~~~~~v~ 236 (264)
T cd01020 223 NITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHcCCCEE
Confidence 67688999998763
No 461
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.75 E-value=1.4e+02 Score=22.64 Aligned_cols=74 Identities=8% Similarity=0.067 Sum_probs=40.9
Q ss_pred EEecC--CCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHH--HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHH
Q psy12303 171 MFTSD--QCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPS--ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEI 246 (480)
Q Consensus 171 vl~~~--~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~--~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I 246 (480)
+++.. ..-..+...++-.|. +++.. ..++..... .|++.+.+ +-+|++.... -.-.-...+
T Consensus 3 liVGG~~~~~~~~~~~~~~~G~---~~~~h--g~~~~~~~~~~~l~~~i~~-------aD~VIv~t~~---vsH~~~~~v 67 (97)
T PF10087_consen 3 LIVGGREDRERRYKRILEKYGG---KLIHH--GRDGGDEKKASRLPSKIKK-------ADLVIVFTDY---VSHNAMWKV 67 (97)
T ss_pred EEEcCCcccHHHHHHHHHHcCC---EEEEE--ecCCCCccchhHHHHhcCC-------CCEEEEEeCC---cChHHHHHH
Confidence 34444 344456677777776 55554 222222322 36666654 3455542221 122347889
Q ss_pred HHHHHHcCcEEEe
Q psy12303 247 ADICQKYNMWLHV 259 (480)
Q Consensus 247 ~~i~~~~~~~l~v 259 (480)
.+.|+++|++++.
T Consensus 68 k~~akk~~ip~~~ 80 (97)
T PF10087_consen 68 KKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHcCCcEEE
Confidence 9999999988754
No 462
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=36.14 E-value=1.5e+02 Score=23.15 Aligned_cols=48 Identities=17% Similarity=0.111 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
.++.++|+..+... |.+|++ |+-..+... -+++.+.++++|+-+-+--
T Consensus 39 ~l~~e~l~~l~~~~------peilii--GTG~~~~~~-~~~~~~~l~~~gi~vE~m~ 86 (109)
T cd05560 39 DLTAAHFEALLALQ------PEVILL--GTGERQRFP-PPALLAPLLARGIGVEVMD 86 (109)
T ss_pred cCCHHHHHHHHhcC------CCEEEE--ecCCCCCcC-CHHHHHHHHHcCCeEEEEC
Confidence 57899999888764 667776 544556655 4888888999998776543
No 463
>TIGR00322 diphth2_R diphthamide biosynthesis protein 2-related domain. Because archaeal species are known to have the diphthamide modification to the conserved His of archaeal and eukaryotic EF-2, it may be that the lone homolog of YKL191W in M. jannaschii, A. fulgidus, and M. thermoautotrophicum is orthologous. However, each of these is considerably shorter than YKL191W and seems more closely related to the uncharacterized protein YIL103W than to YKL191W.
Probab=35.86 E-value=71 Score=30.78 Aligned_cols=79 Identities=14% Similarity=0.039 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH---cCcEEEeeccccccccccccccCcccCC
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK---YNMWLHVDAAWGGGLLLSKKYRHPRLTG 280 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~---~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 280 (480)
+.++.+...+.|++. | .+-|.+..| .|....-.+|+++.++ ..+++..|-+||...+.-... ..
T Consensus 3 y~~e~~~~i~~I~~~---~--~krV~LQfP---dgLl~~a~~ia~~l~~~~~~~v~IlaD~~YGaCcvdd~~a-----~~ 69 (332)
T TIGR00322 3 YNLETEKVIGNIRKY---N--AKRVGLQMP---EGLKIRALEIAEIIEQFCGVETVISGDTSFGACDIDDFTA-----RA 69 (332)
T ss_pred ccccHHHHHHHHHHc---C--CCEEEEECC---HHHHHHHHHHHHHHHhccCceEEEEcCCceecCCCCHHHH-----hh
Confidence 445665655555543 3 344666554 6877777888888876 467888888888876522111 11
Q ss_pred CCCCccceeCccccCC
Q psy12303 281 IERADSVTWNPHKLMG 296 (480)
Q Consensus 281 ~~~~D~~~~s~hK~~~ 296 (480)
+ ++|.++.-+|..+.
T Consensus 70 ~-~aD~iVHyGHscl~ 84 (332)
T TIGR00322 70 L-DVDLIVHYAHTPLV 84 (332)
T ss_pred c-CCCEEEEcCCCCCC
Confidence 2 78999888888887
No 464
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=35.78 E-value=4.5e+02 Score=27.44 Aligned_cols=127 Identities=17% Similarity=0.115 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc--eEEEecCC---CchhHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ--LVMFTSDQ---CHYSVRSCA 185 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~--~~vl~~~~---~h~s~~~~~ 185 (480)
..+...+.+.+.+.+-.+...+++.+||-.+-..|..+.+.... ... ..|-.... .-.-...++
T Consensus 213 ~~l~~~l~~sV~~r~~advpvg~~lSGGlDSS~Iaa~a~~~~~~-----------~~~~~fsvg~~~~~~~D~~~a~~~A 281 (542)
T COG0367 213 EHLRSLLEDAVKRRLVADVPVGVFLSGGLDSSLIAAIAAEELGK-----------EGKTTFTVGFEDSDSPDAKYARAVA 281 (542)
T ss_pred HHHHHHHHHHHHHHhccCCcEEEEeCCCccHHHHHHHHHHhccc-----------cceeeeEeecCCCCCchHHHHHHHH
Confidence 34444555556665544555689999998877777766654200 001 11212211 111235566
Q ss_pred HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe-----e
Q psy12303 186 AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV-----D 260 (480)
Q Consensus 186 ~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v-----D 260 (480)
..+|. ..+.+. +..+++.+++.+.. .....+ +..+...|+=-+.+.+++++.+++. |
T Consensus 282 ~~lg~---~h~~~~------~~~~e~~~~~~~vv--------~~~~~p-~~~~~~~ply~~~~~a~~~g~kVvLSGeGAD 343 (542)
T COG0367 282 KFLGT---PHHEII------LTNEELLNALPEVV--------KALDTP-GGMAASIPLYLLSRKARAEGEKVVLSGEGAD 343 (542)
T ss_pred HHhCC---CcEEEe------ecHHHHHHHHHHHH--------hhcCCC-CcccchhHHHHHHHhhhhcCcEEeecCccHH
Confidence 77776 223332 36677888776652 223333 2256667889999999999988887 5
Q ss_pred cccccc
Q psy12303 261 AAWGGG 266 (480)
Q Consensus 261 ~a~~~~ 266 (480)
+..||.
T Consensus 344 ElFgGY 349 (542)
T COG0367 344 ELFGGY 349 (542)
T ss_pred HHhcCC
Confidence 566665
No 465
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=35.62 E-value=3.2e+02 Score=24.24 Aligned_cols=66 Identities=17% Similarity=0.068 Sum_probs=44.9
Q ss_pred CeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 194 NCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 194 ~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
++..+++. ..+..+.+.+.++++...+++ ..+|.++.+.........++++.+.+.+.|+.+++=+
T Consensus 62 ~i~~~~v~~~~~~~~~~~~~~ai~~a~~~~--v~Vin~S~G~~~~~~~~~~~~~~~~a~~~g~l~V~aa 128 (222)
T cd07492 62 EIGSIKILGEDGRCNSFVLEKALRACVEND--IRIVNLSLGGPGDRDFPLLKELLEYAYKAGGIIVAAA 128 (222)
T ss_pred eEEEEEEeCCCCCcCHHHHHHHHHHHHHCC--CCEEEeCCCCCCCCcCHHHHHHHHHHHHCCCEEEEEC
Confidence 55555553 344567788888888776665 5678888886655544557777777777788777744
No 466
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=35.45 E-value=2.4e+02 Score=27.22 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=39.5
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC--------chhHHHHHHHcCCCCCCeEEeeCCCC
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC--------HYSVRSCAAVCGLGTDNCVEVPSDKR 203 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~--------h~s~~~~~~~~g~~~~~v~~v~~~~~ 203 (480)
.+++.|||.+|.....++.- +..|+ +..|+++... .......++.+|. +|+.++.+.+
T Consensus 68 ~vvs~ggs~gN~g~alA~~a------~~~Gl-----~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~~~ 133 (337)
T TIGR01274 68 TLVSIGGIQSNQTRQVAAVA------AHLGM-----KCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDGFD 133 (337)
T ss_pred EEEECCCCcchHHHHHHHHH------HHcCC-----cEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCccc
Confidence 55676766666544333322 22455 5567776532 1345566788888 7887775422
Q ss_pred CCCCHHHHHHHHHHHHHC
Q psy12303 204 GRLIPSELERLVLERKAK 221 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~ 221 (480)
.. ..+.++.+.+...+.
T Consensus 134 ~~-~~~~~~~a~~~~~~~ 150 (337)
T TIGR01274 134 IG-HRNSWERALEEVRGA 150 (337)
T ss_pred cc-chHHHHHHHHHHHhc
Confidence 11 234454444444333
No 467
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=35.22 E-value=2e+02 Score=27.25 Aligned_cols=55 Identities=16% Similarity=0.121 Sum_probs=31.6
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc-hhHHHHHHHcCCCCCCeEEeeC
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH-YSVRSCAAVCGLGTDNCVEVPS 200 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h-~s~~~~~~~~g~~~~~v~~v~~ 200 (480)
.+++.|+|.+|...-.++.- +..|+ +..|+++.... ......++.+|. +++.++.
T Consensus 58 ~vv~~g~ssGN~g~alA~~a------~~~G~-----~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAA------KKLGL-----DAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHH------HHhCC-----ceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 57777766666654333322 22455 55788876432 223444678887 7777763
No 468
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=35.12 E-value=81 Score=30.21 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccC--CCccccc-----cChHHHHHHHHHcCcEEEee
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSG--TTVLGAF-----DPIEEIADICQKYNMWLHVD 260 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~--~~~~G~~-----~~l~~I~~i~~~~~~~l~vD 260 (480)
.++..++.|++.++.|..+..+.+-.. ...-|.+ .||.+..++|+++|+++++-
T Consensus 22 p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 22 PPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp -GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEEEE
T ss_pred ChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEEec
Confidence 444566666666666766655544221 1122333 57999999999999998875
No 469
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=34.96 E-value=3.2e+02 Score=24.44 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=50.1
Q ss_pred hHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcCcE
Q psy12303 180 SVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYNMW 256 (480)
Q Consensus 180 s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~~~ 256 (480)
.++.+..++ .+|...+.+.|.. |.--+++++..-+.+.++|.. + -|||-+ +++++|.++|.+.|+.
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~--Gl~~leE~~avA~aca~~g~~-----l----EPTGGIdl~Nf~~I~~i~ldaGv~ 204 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG--GLKHLEEYAAVAKACAKHGFY-----L----EPTGGIDLDNFEEIVQIALDAGVE 204 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCCc-----c----CCCCCccHHhHHHHHHHHHHcCCC
Confidence 356666655 3555578888875 334677887777777666532 2 578877 5799999999999987
Q ss_pred EEeeccc
Q psy12303 257 LHVDAAW 263 (480)
Q Consensus 257 l~vD~a~ 263 (480)
.++=-.|
T Consensus 205 kviPHIY 211 (236)
T TIGR03581 205 KVIPHVY 211 (236)
T ss_pred eeccccc
Confidence 6654443
No 470
>KOG3076|consensus
Probab=34.20 E-value=2.5e+02 Score=24.49 Aligned_cols=20 Identities=30% Similarity=0.305 Sum_probs=12.1
Q ss_pred eEECCChhHHHHHHHHHHHH
Q psy12303 132 SILAPGGSISNLYAFLAARH 151 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~ 151 (480)
+..--+||.+|+.||.-+..
T Consensus 9 vavliSGtGsNlqaLid~~r 28 (206)
T KOG3076|consen 9 VAVLISGTGSNLQALIDATR 28 (206)
T ss_pred EEEEEecCchhHHHHHHhhc
Confidence 33344566678888776643
No 471
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=34.01 E-value=3.7e+02 Score=25.17 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhCCC--------CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 111 ILMETVVLEKMRQIIGWQ--------GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~--------~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.++++++.+.+++-+|.+ .-.+.+..||+..|+.++.-+... |. .+.+..++++ .|+...
T Consensus 58 ~~l~~~l~~~~~~~~~l~i~l~~~~~~~ki~vl~Sg~g~nl~~l~~~~~~--------g~--l~~~i~~vis--n~~~~~ 125 (280)
T TIGR00655 58 SSLLAAFKSALAEKFEMTWELILADKLKRVAILVSKEDHCLGDLLWRWYS--------GE--LDAEIALVIS--NHEDLR 125 (280)
T ss_pred HHHHHHHHHHHHHHhCCEEEEecCCCCcEEEEEEcCCChhHHHHHHHHHc--------CC--CCcEEEEEEE--cChhHH
Confidence 455555555466666631 123444445556677777666542 21 1234455555 455566
Q ss_pred HHHHHcCCCCCCeEEeeC
Q psy12303 183 SCAAVCGLGTDNCVEVPS 200 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~ 200 (480)
..++..|+ .+..++.
T Consensus 126 ~~A~~~gI---p~~~~~~ 140 (280)
T TIGR00655 126 SLVERFGI---PFHYIPA 140 (280)
T ss_pred HHHHHhCC---CEEEcCC
Confidence 66777787 6666654
No 472
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.99 E-value=89 Score=24.72 Aligned_cols=49 Identities=20% Similarity=0.209 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.++...+.+++..+.| ++.+++..+ ..-+++.++|+++|+.++-..|.+
T Consensus 64 ~~~~~~~~v~~~~~~g--~~~v~~~~g-------~~~~~~~~~a~~~gi~vigp~C~g 112 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALG--VKAVWLQPG-------AESEELIEAAREAGIRVIGPNCLG 112 (116)
T ss_dssp -HHHHHHHHHHHHHHT---SEEEE-TT-------S--HHHHHHHHHTT-EEEESS-HH
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEcc-------hHHHHHHHHHHHcCCEEEeCCcce
Confidence 5667777777766655 446666555 456999999999999988777654
No 473
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.30 E-value=32 Score=35.75 Aligned_cols=34 Identities=12% Similarity=0.267 Sum_probs=27.8
Q ss_pred cCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 232 SGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 232 ~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.+....|..++++++++.|+++|+-+++|.++.-
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH 184 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYNH 184 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 3456677888899999999999999999987753
No 474
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=33.21 E-value=1.3e+02 Score=27.72 Aligned_cols=55 Identities=13% Similarity=0.059 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc---ccC-------hHHHHHHHHHcCcEEEe
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA---FDP-------IEEIADICQKYNMWLHV 259 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~~-------l~~I~~i~~~~~~~l~v 259 (480)
.++++++++.++.....+..+.+|++.+-+-.... -.. .+++.++|+++|+++++
T Consensus 111 ~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 111 SLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp S-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 46899999999876655455678877766544332 111 46788889999999877
No 475
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=33.14 E-value=2.6e+02 Score=23.50 Aligned_cols=93 Identities=25% Similarity=0.293 Sum_probs=55.9
Q ss_pred eEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--hHHHHHHHHH-cCcE------EEeeccc
Q psy12303 195 CVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--IEEIADICQK-YNMW------LHVDAAW 263 (480)
Q Consensus 195 v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--l~~I~~i~~~-~~~~------l~vD~a~ 263 (480)
+..|.+... +.-..+.||++.++.+++| ++++-.|.|-.|.-+| -++|.+.|+. ||+- +.|-|..
T Consensus 28 lLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~~ 103 (162)
T COG0386 28 LLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGKN 103 (162)
T ss_pred EEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCCC
Confidence 344555443 3446788999988888777 5566667777776654 7999999985 5652 3343322
Q ss_pred cccccccccccCccc---CCCCCCccceeCccccCCC
Q psy12303 264 GGGLLLSKKYRHPRL---TGIERADSVTWNPHKLMGT 297 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~---~~~~~~D~~~~s~hK~~~~ 297 (480)
+. |.+++ +. .|.-+...+-++++|++-.
T Consensus 104 a~-----PLy~~-L~~~~~g~~~~~~IkWNFtKFLvd 134 (162)
T COG0386 104 AH-----PLYKY-LKEQKPGKLGGKDIKWNFTKFLVD 134 (162)
T ss_pred CC-----cHHHH-HHhcCCCCccCCccceeeEEEEEc
Confidence 22 22222 11 1111356777888888654
No 476
>KOG2741|consensus
Probab=33.04 E-value=2.4e+02 Score=27.23 Aligned_cols=24 Identities=17% Similarity=0.351 Sum_probs=11.6
Q ss_pred ccChHHHHHHHHHcCcEEEeecccc
Q psy12303 240 FDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 240 ~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+...++|.+.|+++| .+..||.+.
T Consensus 109 ~~e~~~iveaA~~rg-v~~meg~~~ 132 (351)
T KOG2741|consen 109 VAEAEEIVEAAEARG-VFFMEGLWW 132 (351)
T ss_pred HHHHHHHHHHHHHcC-cEEEeeeee
Confidence 344555555555555 334444443
No 477
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=32.95 E-value=35 Score=29.20 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|+-|...|.++++. -++.|+|+.. ...-++.|.+..++.|+.+..|.-++|-.+
T Consensus 10 GK~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~GekI 63 (174)
T TIGR00334 10 GKDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEKI 63 (174)
T ss_pred cchHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHHH
Confidence 56688888877743 2556666432 234478888889999999999998888654
No 478
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.88 E-value=3.1e+02 Score=25.46 Aligned_cols=60 Identities=18% Similarity=0.087 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHHHCCCccEEEEeccCC-Ccccc---ccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 206 LIPSELERLVLERKAKGDIPFFVNCTSGT-TVLGA---FDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 206 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~G~---~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
.+++++..+++.....|.. .++++.-|. +..+. ..++..|..+.+..+.++++|..|+.+
T Consensus 145 ~s~~e~~~A~e~i~~~Gn~-~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 145 ATLEEWLYAAEYIMSEGNE-NVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCHHHHHHHHHHHHhcCCC-eEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 4888999888776655543 333333332 22222 235777777777779999999999876
No 479
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=32.75 E-value=1.9e+02 Score=27.31 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=38.2
Q ss_pred CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC
Q psy12303 130 GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 130 ~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~ 201 (480)
..++=.++|..++-.|+.++.. |. +.++++++..-..-.+.++.+|. +++.+|..
T Consensus 63 ~tIVE~TSGNTGI~LA~vaa~~---------Gy-----~~iivmP~~~S~er~~~l~a~GA---evi~t~~~ 117 (300)
T COG0031 63 GTIVEATSGNTGIALAMVAAAK---------GY-----RLIIVMPETMSQERRKLLRALGA---EVILTPGA 117 (300)
T ss_pred CEEEEcCCChHHHHHHHHHHHc---------CC-----cEEEEeCCCCCHHHHHHHHHcCC---EEEEcCCC
Confidence 4466667777778777766643 43 55777777666666677888888 88888763
No 480
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=32.73 E-value=2.7e+02 Score=22.62 Aligned_cols=67 Identities=22% Similarity=0.367 Sum_probs=43.9
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---------cChHHHHHHHHHc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---------DPIEEIADICQKY 253 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---------~~l~~I~~i~~~~ 253 (480)
..+...|+ .++.+|+... .++.++++...+-- +....|.++-+..|. .+|.. .+.++|.+.+++.
T Consensus 51 ~~a~~~gl---~y~~iPv~~~-~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~~~~ 124 (135)
T TIGR01244 51 AAAEAAGV---TYHHQPVTAG-DITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRAQAA 124 (135)
T ss_pred HHHHHCCC---eEEEeecCCC-CCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 45566787 7888888654 36655544332221 222458888888886 78864 4678899999887
Q ss_pred Cc
Q psy12303 254 NM 255 (480)
Q Consensus 254 ~~ 255 (480)
|.
T Consensus 125 G~ 126 (135)
T TIGR01244 125 GY 126 (135)
T ss_pred CC
Confidence 75
No 481
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=32.52 E-value=3.4e+02 Score=26.20 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCC-Cccc---cccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGT-TVLG---AFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~G---~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
..+++++..+.+.-...|.. .++++.-|. +..+ ...++..|..+.+..+.++++|..|+.+.
T Consensus 210 ~~ti~E~l~A~e~i~~~GN~-~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 210 SATIEEWLMAAEYILAEGNP-NVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCHHHHHHHHHHHHHcCCC-eEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 34888999888877665543 334333333 3322 23568888888888899999999999775
No 482
>KOG1465|consensus
Probab=32.41 E-value=4.4e+02 Score=24.93 Aligned_cols=119 Identities=16% Similarity=0.141 Sum_probs=68.9
Q ss_pred CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch--hHHHHHHH--cCCCCCCeEEeeCCCCCC
Q psy12303 130 GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY--SVRSCAAV--CGLGTDNCVEVPSDKRGR 205 (480)
Q Consensus 130 ~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~--s~~~~~~~--~g~~~~~v~~v~~~~~~~ 205 (480)
.++++|.|.|-....-|..|+++ |. +..|++-+..-. .+..+... .|+ +...||
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk--------~R-----kf~viVaE~~p~~qgH~~Ak~la~~gi---ettVI~------ 220 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKK--------GR-----KFRVIVAEGAPNNQGHELAKPLAQAGI---ETTVIP------ 220 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhc--------cC-----ceEEEEeecCCcccchHhhHHHHHcCC---eeEEec------
Confidence 57999999998888777777663 21 335555443211 12233333 344 444443
Q ss_pred CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC
Q psy12303 206 LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE 282 (480)
Q Consensus 206 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 282 (480)
| .++-+.+.+. -+.|+.++.--..|.+ .-..-++..||+|-.+++|=+ +..-.+|.+..
T Consensus 221 -d-aaVfA~MsrV------nKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA---p~yKLsPlyp~------- 282 (353)
T KOG1465|consen 221 -D-AAVFAMMSRV------NKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA---PMYKLSPLYPT------- 282 (353)
T ss_pred -c-HHHHHHhhhc------ceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec---chhhcCCCCCC-------
Confidence 2 2344444443 3456666555555544 236778888999999988733 33446666665
Q ss_pred CCccce
Q psy12303 283 RADSVT 288 (480)
Q Consensus 283 ~~D~~~ 288 (480)
+.|++.
T Consensus 283 ~~ds~~ 288 (353)
T KOG1465|consen 283 NPDSFH 288 (353)
T ss_pred CHHHHH
Confidence 666654
No 483
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=31.89 E-value=3.2e+02 Score=23.40 Aligned_cols=68 Identities=9% Similarity=-0.025 Sum_probs=35.4
Q ss_pred eEEEecCCC--chhHH---HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 169 LVMFTSDQC--HYSVR---SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 169 ~~vl~~~~~--h~s~~---~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
..|+++... ..... ...+..|. ++.++.+|- -|.++++++++...++..+...|+-.++....+.+.+
T Consensus 27 ~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~Dv---~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~ 99 (181)
T PF08659_consen 27 RLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCDV---TDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQD 99 (181)
T ss_dssp EEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE--T---TSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC
T ss_pred EEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccCc---cCHHHHHHHHHHHHhccCCcceeeeeeeeeccccccc
Confidence 367777662 22222 23333344 777777773 4899999999887666655667888777666665544
No 484
>PLN03244 alpha-amylase; Provisional
Probab=31.78 E-value=37 Score=36.50 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=30.7
Q ss_pred eccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 230 CTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 230 ~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.-+++...|+.++++++++.|++.||-|++|-++.-
T Consensus 430 fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH 465 (872)
T PLN03244 430 FFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSY 465 (872)
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 334667788889999999999999999999998753
No 485
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=31.42 E-value=2.2e+02 Score=23.52 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=36.4
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh--HHHHHHHH
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI--EEIADICQ 251 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l--~~I~~i~~ 251 (480)
++..++.|- -+.+++++.+++..+.....-+++.+++....+.++++ +++.+..+
T Consensus 53 ~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 53 KITFIECDL---SDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp EEEEEESET---TSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred ccccccccc---cccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 777787763 37888888888766444456677877887776766554 44444433
No 486
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=31.18 E-value=5.7e+02 Score=25.90 Aligned_cols=125 Identities=16% Similarity=0.087 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec-CCCch---hHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS-DQCHY---SVRSCAA 186 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~-~~~h~---s~~~~~~ 186 (480)
.++++.+.+.+.+.+..+..-+++.|||-.+...+..+.+.. ++ ..+ . -..+-.. ..... .....++
T Consensus 236 e~l~~~l~~aV~~r~~~~~~vg~~LSGGlDSs~iaa~a~~~~--~~---~~~---~-~~t~~~~~~~~~~E~~~A~~vA~ 306 (467)
T TIGR01536 236 DELRSLLEDAVKRRLVADVPVGVLLSGGLDSSLVAAIARREA--PR---GPV---H-TFSIGFEGSPDFDESPYARKVAD 306 (467)
T ss_pred HHHHHHHHHHHHHHhccCCceEEEecCChhHHHHHHHHHHhc--CC---CCc---e-EEEEecCCCCCCChHHHHHHHHH
Confidence 445566666666665554445889999998887766554321 00 000 0 0112122 11222 4566777
Q ss_pred HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 187 VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
.+|. +...+.++ .+++.+.+.+...... .|... ....+.-.+.+.++++|+.++.+|-
T Consensus 307 ~lg~---~~~~i~~~------~~~~~~~~~~~v~~~~--------~p~~~-~~~~~~~~l~~~a~~~G~~vlltG~ 364 (467)
T TIGR01536 307 HLGT---EHHEVLFS------VEEGLDALPEVIYHLE--------DPTTI-RASIPLYLLSKLAREDGVKVVLSGE 364 (467)
T ss_pred HhCC---cCeEEECC------HHHHHHHHHHHHHhhC--------CCCCC-chHHHHHHHHHHHHhcCCEEEEecC
Confidence 7887 44555443 3344444433211100 11111 1223456788889999988887763
No 487
>TIGR00272 DPH2 diphthamide biosynthesis protein 2. This protein has been shown in Saccharomyces cerevisiae to be one of several required for the modification of a particular histidine residue of translation elongation factor 2 to diphthamide. This modified site can then become the target for ADP-ribosylation by diphtheria toxin.
Probab=31.14 E-value=1.3e+02 Score=30.94 Aligned_cols=86 Identities=9% Similarity=0.079 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH------cCcEEEeeccccccccccccccCcccCC
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK------YNMWLHVDAAWGGGLLLSKKYRHPRLTG 280 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~------~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 280 (480)
+++.+.+.|++ .+.+ =|.+..| .|...+-.+|+++.++ ..+|+..|-+||...+.--.. ..
T Consensus 38 ei~~~~~~I~~---~~~k--rVaLQFP---DgLL~~a~~va~~L~~~~~~~~~~v~IlaDtsYGaCCVDevaA-----~h 104 (496)
T TIGR00272 38 EIEPTVGYIKQ---GNEY--QVALQFP---DDLLKDSSKVVRLLQSKFPHGKIKFWVLADTAYSSCCVDEVAA-----EH 104 (496)
T ss_pred hHHHHHHHHHH---CCCC--EEEEECC---hHHHHHHHHHHHHHHhhcccCCceEEEEeCCcccccccCHHHH-----hh
Confidence 44444444443 3332 3666544 7888888888888876 578999999999877522111 11
Q ss_pred CCCCccceeCccccCCCccc-ceEEEEe
Q psy12303 281 IERADSVTWNPHKLMGTLLQ-CSTIHFK 307 (480)
Q Consensus 281 ~~~~D~~~~s~hK~~~~p~~-~g~~~~~ 307 (480)
+ ++|.++.-+|-.+. |.. .-++++-
T Consensus 105 v-~aD~iVHyGhsCLs-p~~~lPviYVf 130 (496)
T TIGR00272 105 V-HAEAVVHFGDACLS-AIQNLPVVYVF 130 (496)
T ss_pred c-CCCEEEEeCCCCCC-CCCCCCEEEEe
Confidence 2 78999998998887 433 3444443
No 488
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=30.89 E-value=1e+02 Score=31.13 Aligned_cols=56 Identities=25% Similarity=0.208 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHH-HcCcEEEeecccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQ-KYNMWLHVDAAWG 264 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~-~~~~~l~vD~a~~ 264 (480)
+-+.|.+.+.+..++- .|++|++ .+|-++|.| ||++.+++-+. ++|++++.=-+-|
T Consensus 81 ~~~~L~~~i~ei~~~~-~p~~ifv-~~TC~t~iIGdDle~va~~~~~~~gipVV~v~~~G 138 (457)
T CHL00073 81 DYEELKRLCLQIKKDR-NPSVIVW-IGTCTTEIIKMDLEGMAPKLEAEIGIPIVVARANG 138 (457)
T ss_pred CHHHHHHHHHHHHHhC-CCCEEEE-EccCcHHhhccCHHHHHHHHHHhhCCCEEEEeCCC
Confidence 3467888888766554 3554443 234567877 89999987665 7899887654433
No 489
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=30.86 E-value=48 Score=30.46 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=18.9
Q ss_pred ccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 238 GAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 238 G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
|...+.+++.++++++++-+++|++|-+..
T Consensus 49 G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 444455666777777777777777765543
No 490
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=30.78 E-value=55 Score=23.84 Aligned_cols=29 Identities=10% Similarity=0.200 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSI 140 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~ 140 (480)
.--+++.++|++.||.+..++.+..|.|.
T Consensus 40 kAN~ali~~La~~l~v~ks~i~i~~G~~S 68 (77)
T PF02594_consen 40 KANKALIRFLAKALGVPKSDIEIVSGHTS 68 (77)
T ss_dssp CHHHHHHHHHHHHCT--TTCEEECC-CCC
T ss_pred hhHHHHHHHHHHHhCCCcccEEEEecCCC
Confidence 34567899999999999999999998764
No 491
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=30.54 E-value=98 Score=29.81 Aligned_cols=42 Identities=24% Similarity=0.246 Sum_probs=32.1
Q ss_pred HHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEE
Q psy12303 215 VLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWL 257 (480)
Q Consensus 215 i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l 257 (480)
++=.+-.|..|..|++... +..|...+.+++.++|++||+.+
T Consensus 147 vdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~ 188 (339)
T PRK09314 147 VDLCKLAGLKPVAVICEIM-KEDGTMARRDDLEDFAKKHNLKM 188 (339)
T ss_pred hHHHHHcCCCceEEEEEEe-cCCCCcccHHHHHHHHHHcCCcE
Confidence 3333345666877777765 66799999999999999999887
No 492
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.43 E-value=1e+02 Score=22.08 Aligned_cols=23 Identities=30% Similarity=0.546 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHcCcEEEeecccccc
Q psy12303 242 PIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 242 ~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
|+++|..-++..|. ++|+.||--
T Consensus 29 PiKRii~eArdr~~--LIDATYGRr 51 (89)
T COG2052 29 PIKRIIQEARDRGM--LIDATYGRR 51 (89)
T ss_pred cHHHHHHHHHhcCc--EEEcccCce
Confidence 89999999999986 469988753
No 493
>KOG3974|consensus
Probab=30.37 E-value=52 Score=30.07 Aligned_cols=46 Identities=22% Similarity=0.209 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCcccc----ccChHHHHHHHHHcCcEEEeecc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGA----FDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
+.+.+++.+.+- .++|+. . -.|. ...+++|.+.+++.++++++||-
T Consensus 91 av~~i~k~L~Rl------havVIG-P---GLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQRL------HAVVIG-P---GLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHhhe------eEEEEC-C---CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 445566666553 333433 2 2454 22368889999999999999983
No 494
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=30.21 E-value=71 Score=31.14 Aligned_cols=60 Identities=10% Similarity=-0.000 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCc-cccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTV-LGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~-~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
+.++.++.|+...+.|....+-.+-.+... .-....+++|.++|+++|+.+++|-.....
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~~l 72 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPKVL 72 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 677888888888877765444444333321 223456899999999999999999765543
No 495
>PLN02828 formyltetrahydrofolate deformylase
Probab=30.19 E-value=4.6e+02 Score=24.44 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=30.9
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC---chhHHHHHHHcCCCCCCeEEeeCC
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC---HYSVRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~---h~s~~~~~~~~g~~~~~v~~v~~~ 201 (480)
+.+..||+..|+.+|.-+... |. .+.+.+.+++... .......++..|+ .+..+|..
T Consensus 73 iavlvSg~g~nl~~ll~~~~~--------g~--l~~eI~~ViSn~~~~~~a~~~~~A~~~gI---P~~~~~~~ 132 (268)
T PLN02828 73 IAVLASKQDHCLIDLLHRWQD--------GR--LPVDITCVISNHERGPNTHVMRFLERHGI---PYHYLPTT 132 (268)
T ss_pred EEEEEcCCChhHHHHHHhhhc--------CC--CCceEEEEEeCCCCCCCchHHHHHHHcCC---CEEEeCCC
Confidence 444445556677776655432 21 1224456666432 2256666777787 66667664
No 496
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=30.16 E-value=2e+02 Score=28.29 Aligned_cols=52 Identities=21% Similarity=0.264 Sum_probs=35.4
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS 200 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~ 200 (480)
++-.++|..+.-.|..+++ .|+ +..|++++..-..-...++.+|. +|+.++.
T Consensus 114 vV~aSsGN~G~alA~~a~~---------~G~-----~~~ivvp~~~~~~k~~~lr~~GA---~Vi~~~~ 165 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAM---------KGY-----KMILTMPSYTSLERRVTMRAFGA---ELVLTDP 165 (368)
T ss_pred EEEeCCchHHHHHHHHHHH---------cCC-----CEEEEECCCCCHHHHHHHHHcCC---EEEEECC
Confidence 5666677776666665543 354 55788887666667777888887 7777764
No 497
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=30.16 E-value=5.4e+02 Score=25.29 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=46.1
Q ss_pred EEEecCCCchh-HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc--------ccc
Q psy12303 170 VMFTSDQCHYS-VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL--------GAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s-~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~--------G~~ 240 (480)
++|++...... +..-+..+|....++..++. .+++.+.+.+++. .|.+|++...++.. |..
T Consensus 113 VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~~e-----~~le~I~~~i~~~-----~~~lVVIDSIq~l~~~~~~~~~g~~ 182 (372)
T cd01121 113 VLYVSGEESPEQIKLRADRLGISTENLYLLAE-----TNLEDILASIEEL-----KPDLVIIDSIQTVYSSELTSAPGSV 182 (372)
T ss_pred EEEEECCcCHHHHHHHHHHcCCCcccEEEEcc-----CcHHHHHHHHHhc-----CCcEEEEcchHHhhccccccCCCCH
Confidence 67776544332 33334556664445443322 3677787777542 37888888876543 112
Q ss_pred cC----hHHHHHHHHHcCcEEEe
Q psy12303 241 DP----IEEIADICQKYNMWLHV 259 (480)
Q Consensus 241 ~~----l~~I~~i~~~~~~~l~v 259 (480)
.. +.++.++++++|+.+++
T Consensus 183 ~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 183 SQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEE
Confidence 11 34577889999976543
No 498
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=29.94 E-value=1.1e+02 Score=28.54 Aligned_cols=55 Identities=16% Similarity=0.116 Sum_probs=33.6
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH
Q psy12303 197 EVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK 252 (480)
Q Consensus 197 ~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~ 252 (480)
..|.++ |.+|.+.+++.++...+.|..-.++..+.|....=+.+.-.++.+.+.+
T Consensus 9 ~TPf~~-g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~ 63 (279)
T cd00953 9 ITPFTG-NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSD 63 (279)
T ss_pred ecCcCC-CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHH
Confidence 456777 9999999999999888777554334433333333333444555554444
No 499
>PLN03013 cysteine synthase
Probab=29.90 E-value=2.5e+02 Score=28.15 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=38.7
Q ss_pred eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC
Q psy12303 132 SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 132 ~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~ 201 (480)
++-.++|..+.-.|+.+.. .|. +..|++++.....-...++.+|. +|+.++.+
T Consensus 178 VVeaSSGN~G~ALA~~a~~---------~G~-----~~~VvvP~~~s~~K~~~ira~GA---eVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAAS---------RGY-----RLILTMPASMSMERRVLLKAFGA---ELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHH---------cCC-----CEEEEECCCCcHHHHHHHHHcCC---EEEEECCC
Confidence 6677788887777776554 344 55888888887777888888888 78777543
No 500
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=29.69 E-value=51 Score=30.28 Aligned_cols=23 Identities=17% Similarity=0.162 Sum_probs=11.3
Q ss_pred ChHHHHHHHHHcCcEEEeecccc
Q psy12303 242 PIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 242 ~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+.+++.++++++++-+++|++|-
T Consensus 54 ~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CHHHHHHHHHhCCCcEEEECCCc
Confidence 34444455555555555555443
Done!