Query psy12303
Match_columns 480
No_of_seqs 258 out of 2865
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 15:33:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vp6_A Glutamate decarboxylase 100.0 4E-68 1.4E-72 541.9 53.3 475 3-480 23-505 (511)
2 3k40_A Aromatic-L-amino-acid d 100.0 1.2E-65 4.2E-70 519.2 41.6 451 3-479 5-470 (475)
3 2okj_A Glutamate decarboxylase 100.0 4.4E-64 1.5E-68 513.3 53.0 475 3-480 20-502 (504)
4 4e1o_A HDC, histidine decarbox 100.0 6.8E-65 2.3E-69 515.3 45.3 452 3-479 10-477 (481)
5 2jis_A Cysteine sulfinic acid 100.0 6.9E-64 2.3E-68 512.8 51.0 475 3-480 38-515 (515)
6 1js3_A DDC;, DOPA decarboxylas 100.0 1.4E-60 4.7E-65 485.7 44.9 455 3-479 5-473 (486)
7 2qma_A Diaminobutyrate-pyruvat 100.0 2.3E-58 8E-63 470.2 48.2 456 3-480 33-496 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 6.4E-46 2.2E-50 374.1 37.0 403 34-478 6-432 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.6E-43 5.4E-48 360.1 36.2 408 31-479 16-443 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 2.3E-40 7.9E-45 337.8 26.9 391 42-479 34-436 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 6.4E-39 2.2E-43 328.2 30.6 390 43-479 68-468 (514)
12 3f9t_A TDC, L-tyrosine decarbo 100.0 1.8E-37 6.3E-42 307.0 36.9 385 44-478 3-396 (397)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 1.7E-36 5.9E-41 305.2 29.2 368 43-477 55-455 (456)
14 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 1.5E-35 5E-40 289.8 23.3 377 43-478 20-441 (450)
15 1wyu_B Glycine dehydrogenase s 100.0 7.9E-32 2.7E-36 272.5 32.7 394 35-478 31-439 (474)
16 3nnk_A Ureidoglycine-glyoxylat 100.0 2.9E-31 9.8E-36 264.0 28.9 356 70-479 9-389 (411)
17 4hvk_A Probable cysteine desul 100.0 3.2E-31 1.1E-35 260.7 28.7 344 74-479 2-372 (382)
18 3e9k_A Kynureninase; kynurenin 100.0 7.7E-31 2.6E-35 265.1 28.8 360 74-479 69-460 (465)
19 1wyu_A Glycine dehydrogenase ( 100.0 1.7E-30 5.8E-35 260.4 30.2 375 34-477 30-437 (438)
20 3isl_A Purine catabolism prote 100.0 5.1E-31 1.7E-35 262.6 25.6 356 70-479 7-389 (416)
21 4eb5_A Probable cysteine desul 100.0 1.2E-30 4.1E-35 256.8 28.0 345 74-479 2-372 (382)
22 2z9v_A Aspartate aminotransfer 100.0 4.6E-30 1.6E-34 253.7 30.8 353 71-479 7-370 (392)
23 2huf_A Alanine glyoxylate amin 100.0 3.5E-30 1.2E-34 254.6 28.2 323 107-479 47-382 (393)
24 2dr1_A PH1308 protein, 386AA l 100.0 2.6E-30 9E-35 254.7 26.7 350 73-479 20-378 (386)
25 3lvm_A Cysteine desulfurase; s 100.0 9.6E-30 3.3E-34 254.0 30.9 343 73-479 23-398 (423)
26 1vjo_A Alanine--glyoxylate ami 100.0 3E-30 1E-34 255.1 26.6 347 74-478 35-393 (393)
27 3zrp_A Serine-pyruvate aminotr 100.0 1.5E-30 5.2E-35 256.2 23.8 320 107-479 30-362 (384)
28 1t3i_A Probable cysteine desul 100.0 1E-29 3.5E-34 253.5 29.5 357 74-479 30-412 (420)
29 1kmj_A Selenocysteine lyase; p 100.0 8E-30 2.7E-34 253.0 28.3 357 74-479 25-404 (406)
30 2yrr_A Aminotransferase, class 100.0 3.3E-30 1.1E-34 250.7 24.3 317 107-479 28-352 (353)
31 3kgw_A Alanine-glyoxylate amin 100.0 5.8E-30 2E-34 252.9 26.2 353 72-479 21-387 (393)
32 1eg5_A Aminotransferase; PLP-d 100.0 5.1E-29 1.7E-33 245.3 31.3 343 74-479 3-375 (384)
33 1elu_A L-cysteine/L-cystine C- 100.0 2.1E-29 7.3E-34 248.6 27.5 315 111-477 58-389 (390)
34 1iug_A Putative aspartate amin 100.0 5.2E-30 1.8E-34 249.4 22.5 313 107-479 29-347 (352)
35 2ch1_A 3-hydroxykynurenine tra 100.0 2.3E-29 7.8E-34 249.0 27.1 354 71-479 15-382 (396)
36 3f0h_A Aminotransferase; RER07 100.0 3.3E-29 1.1E-33 246.1 26.0 316 107-479 47-373 (376)
37 1m32_A 2-aminoethylphosphonate 100.0 4.8E-29 1.6E-33 243.8 26.9 320 112-480 37-365 (366)
38 3cai_A Possible aminotransfera 100.0 4.7E-29 1.6E-33 247.6 27.1 343 73-476 27-405 (406)
39 2bkw_A Alanine-glyoxylate amin 100.0 2.3E-29 8E-34 247.9 21.6 355 73-480 4-384 (385)
40 3ffr_A Phosphoserine aminotran 100.0 4.7E-29 1.6E-33 243.5 22.6 342 75-477 5-361 (362)
41 3vax_A Putative uncharacterize 100.0 5.1E-29 1.7E-33 246.8 20.7 359 71-479 19-399 (400)
42 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 2.5E-29 8.6E-34 246.4 18.0 303 111-480 52-370 (371)
43 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 2E-28 6.9E-33 235.3 23.3 383 43-478 38-459 (501)
44 1qz9_A Kynureninase; kynurenin 100.0 9E-28 3.1E-32 239.2 27.0 349 73-479 29-401 (416)
45 1svv_A Threonine aldolase; str 100.0 1.5E-27 5.1E-32 232.6 26.9 333 75-479 17-357 (359)
46 3dzz_A Putative pyridoxal 5'-p 100.0 1.9E-27 6.5E-32 234.7 27.9 333 85-480 42-389 (391)
47 3a9z_A Selenocysteine lyase; P 100.0 3.4E-27 1.2E-31 236.2 24.7 360 73-479 19-427 (432)
48 1j32_A Aspartate aminotransfer 100.0 6.8E-27 2.3E-31 230.6 25.2 322 91-479 50-386 (388)
49 1v72_A Aldolase; PLP-dependent 100.0 2.3E-27 7.8E-32 231.1 20.9 301 111-479 42-352 (356)
50 2w8t_A SPT, serine palmitoyltr 100.0 1.9E-26 6.6E-31 230.3 28.0 301 111-479 108-414 (427)
51 1gd9_A Aspartate aminotransfer 100.0 1.2E-26 4E-31 229.0 25.3 324 91-479 46-385 (389)
52 3nra_A Aspartate aminotransfer 100.0 4E-27 1.4E-31 233.7 21.6 312 103-479 73-404 (407)
53 1o4s_A Aspartate aminotransfer 100.0 1.1E-26 3.8E-31 229.1 23.9 321 89-479 59-388 (389)
54 3l8a_A METC, putative aminotra 100.0 1.8E-26 6.1E-31 230.1 25.3 330 85-478 76-420 (421)
55 3e77_A Phosphoserine aminotran 99.9 2.2E-27 7.6E-32 229.9 17.7 347 74-479 14-374 (377)
56 3ke3_A Putative serine-pyruvat 99.9 6.4E-27 2.2E-31 230.0 21.3 321 107-479 30-375 (379)
57 3ffh_A Histidinol-phosphate am 99.9 1.5E-25 5.2E-30 218.9 30.4 289 115-476 70-362 (363)
58 4dq6_A Putative pyridoxal phos 99.9 4E-26 1.4E-30 225.2 26.6 327 85-477 47-390 (391)
59 3kax_A Aminotransferase, class 99.9 5.3E-26 1.8E-30 223.7 26.8 327 85-477 39-382 (383)
60 2gb3_A Aspartate aminotransfer 99.9 1.7E-26 6E-31 229.3 23.3 319 91-479 63-401 (409)
61 1xi9_A Putative transaminase; 99.9 2.6E-26 8.9E-31 227.9 24.3 323 91-479 61-402 (406)
62 3aow_A Putative uncharacterize 99.9 1.6E-25 5.4E-30 224.7 29.7 317 103-479 113-444 (448)
63 3tqx_A 2-amino-3-ketobutyrate 99.9 3.8E-26 1.3E-30 226.0 24.1 303 111-480 87-396 (399)
64 2fnu_A Aminotransferase; prote 99.9 9.5E-26 3.2E-30 221.3 25.8 312 114-479 34-371 (375)
65 3euc_A Histidinol-phosphate am 99.9 5.1E-26 1.8E-30 222.6 23.7 290 115-479 70-367 (367)
66 2zc0_A Alanine glyoxylate tran 99.9 7.1E-26 2.4E-30 224.8 24.8 319 104-479 71-403 (407)
67 3ly1_A Putative histidinol-pho 99.9 3.8E-25 1.3E-29 215.3 29.5 294 114-479 53-351 (354)
68 3uwc_A Nucleotide-sugar aminot 99.9 2.5E-26 8.7E-31 225.3 20.1 305 115-479 41-370 (374)
69 1u08_A Hypothetical aminotrans 99.9 1.4E-25 4.6E-30 221.2 25.2 325 89-475 48-385 (386)
70 2z61_A Probable aspartate amin 99.9 1.2E-25 4E-30 220.3 24.2 312 91-478 49-369 (370)
71 1c7n_A Cystalysin; transferase 99.9 1.4E-25 4.7E-30 222.1 24.8 308 110-479 68-392 (399)
72 1rv3_A Serine hydroxymethyltra 99.9 3.7E-26 1.3E-30 231.2 20.2 322 105-478 83-429 (483)
73 2o0r_A RV0858C (N-succinyldiam 99.9 1.2E-25 4.2E-30 223.4 23.2 327 90-479 44-395 (411)
74 3a2b_A Serine palmitoyltransfe 99.9 2.3E-25 7.7E-30 220.5 24.8 302 109-479 85-391 (398)
75 3cq5_A Histidinol-phosphate am 99.9 1.9E-24 6.4E-29 211.6 31.0 290 111-478 72-366 (369)
76 1fc4_A 2-amino-3-ketobutyrate 99.9 7.8E-25 2.7E-29 216.8 28.6 301 112-479 90-396 (401)
77 1vp4_A Aminotransferase, putat 99.9 1.2E-25 4.3E-30 224.3 23.0 317 103-479 80-417 (425)
78 3g0t_A Putative aminotransfera 99.9 1.7E-25 5.9E-30 224.1 24.1 330 102-479 76-436 (437)
79 1d2f_A MALY protein; aminotran 99.9 4.1E-25 1.4E-29 218.0 26.5 326 89-479 46-388 (390)
80 3piu_A 1-aminocyclopropane-1-c 99.9 6.9E-25 2.4E-29 219.6 28.4 324 104-479 82-431 (435)
81 1iay_A ACC synthase 2, 1-amino 99.9 4.3E-25 1.5E-29 220.7 26.6 316 109-479 84-426 (428)
82 3frk_A QDTB; aminotransferase, 99.9 2.3E-26 7.7E-31 225.7 17.0 300 115-478 39-366 (373)
83 3dyd_A Tyrosine aminotransfera 99.9 2.2E-25 7.4E-30 222.6 24.2 314 103-479 91-423 (427)
84 2o1b_A Aminotransferase, class 99.9 4.6E-25 1.6E-29 218.7 26.3 325 89-479 65-402 (404)
85 3get_A Histidinol-phosphate am 99.9 6.3E-25 2.2E-29 214.7 26.7 289 116-478 69-365 (365)
86 1b5p_A Protein (aspartate amin 99.9 4.2E-25 1.4E-29 217.6 25.4 309 103-479 63-384 (385)
87 2dou_A Probable N-succinyldiam 99.9 1.5E-24 5.3E-29 212.8 29.4 322 89-477 43-375 (376)
88 3h14_A Aminotransferase, class 99.9 7.4E-25 2.5E-29 216.3 27.0 323 85-479 46-381 (391)
89 3qm2_A Phosphoserine aminotran 99.9 1.5E-26 5E-31 225.5 14.0 340 74-479 28-384 (386)
90 1v2d_A Glutamine aminotransfer 99.9 1.6E-25 5.6E-30 220.1 21.6 316 90-479 44-370 (381)
91 3fdb_A Beta C-S lyase, putativ 99.9 1.5E-24 5.2E-29 212.8 28.1 323 85-479 38-375 (377)
92 1yiz_A Kynurenine aminotransfe 99.9 3.2E-25 1.1E-29 221.7 23.6 337 89-479 55-428 (429)
93 2c81_A Glutamine-2-deoxy-scyll 99.9 7.6E-25 2.6E-29 218.1 26.2 321 111-479 41-413 (418)
94 3op7_A Aminotransferase class 99.9 3.6E-25 1.2E-29 217.2 23.0 306 102-479 57-370 (375)
95 1b9h_A AHBA synthase, protein 99.9 1.7E-24 5.8E-29 213.4 27.9 308 116-479 42-387 (388)
96 3ele_A Amino transferase; RER0 99.9 3.3E-25 1.1E-29 219.3 22.8 311 102-479 70-395 (398)
97 2zyj_A Alpha-aminodipate amino 99.9 2.6E-25 9E-30 219.9 21.6 299 116-479 78-392 (397)
98 3dr4_A Putative perosamine syn 99.9 3.6E-25 1.2E-29 218.5 22.4 306 114-477 58-390 (391)
99 3ftb_A Histidinol-phosphate am 99.9 5.2E-24 1.8E-28 207.7 29.9 291 115-480 64-361 (361)
100 2oga_A Transaminase; PLP-depen 99.9 7.4E-25 2.5E-29 216.8 23.8 303 115-480 66-396 (399)
101 1fg7_A Histidinol phosphate am 99.9 4.4E-24 1.5E-28 207.9 28.5 287 115-476 61-354 (356)
102 1bs0_A Protein (8-amino-7-oxon 99.9 1.5E-24 5E-29 213.6 25.2 294 112-476 84-383 (384)
103 2x5d_A Probable aminotransfera 99.9 9.8E-25 3.3E-29 216.9 23.5 328 89-479 55-397 (412)
104 3kki_A CAI-1 autoinducer synth 99.9 2.1E-24 7.1E-29 214.3 25.0 296 112-479 104-403 (409)
105 2cb1_A O-acetyl homoserine sul 99.9 4.3E-24 1.5E-28 212.1 27.2 304 112-475 56-411 (412)
106 2bwn_A 5-aminolevulinate synth 99.9 5.6E-24 1.9E-28 210.7 26.8 305 112-480 91-400 (401)
107 3m5u_A Phosphoserine aminotran 99.9 4.3E-25 1.5E-29 213.2 18.1 301 107-479 45-359 (361)
108 1bw0_A TAT, protein (tyrosine 99.9 3.3E-24 1.1E-28 213.4 25.0 319 103-479 70-412 (416)
109 2vi8_A Serine hydroxymethyltra 99.9 7.9E-25 2.7E-29 217.0 20.4 309 107-479 64-386 (405)
110 3ezs_A Aminotransferase ASPB; 99.9 1.1E-23 3.8E-28 206.6 27.8 314 89-479 41-374 (376)
111 2dkj_A Serine hydroxymethyltra 99.9 3.5E-25 1.2E-29 219.7 17.1 305 111-478 68-386 (407)
112 2a7v_A Serine hydroxymethyltra 99.9 3.9E-24 1.3E-28 214.3 24.7 309 107-478 95-439 (490)
113 3n0l_A Serine hydroxymethyltra 99.9 5.6E-24 1.9E-28 211.7 25.3 308 107-478 66-387 (417)
114 2fyf_A PSAT, phosphoserine ami 99.9 1.3E-24 4.6E-29 214.9 20.5 311 107-480 73-398 (398)
115 3jtx_A Aminotransferase; NP_28 99.9 3.4E-23 1.2E-27 204.6 29.9 318 90-477 49-395 (396)
116 3b46_A Aminotransferase BNA3; 99.9 8.8E-25 3E-29 219.5 17.7 340 88-477 74-444 (447)
117 3fvs_A Kynurenine--oxoglutarat 99.9 4.4E-24 1.5E-28 212.9 22.3 323 102-480 61-422 (422)
118 3hdo_A Histidinol-phosphate am 99.9 6.3E-24 2.2E-28 207.2 22.9 284 115-478 68-353 (360)
119 3tcm_A Alanine aminotransferas 99.9 3.7E-23 1.3E-27 210.2 29.0 330 100-479 126-493 (500)
120 1lc5_A COBD, L-threonine-O-3-p 99.9 3.5E-23 1.2E-27 202.2 27.6 291 115-479 62-359 (364)
121 3p1t_A Putative histidinol-pho 99.9 6.2E-23 2.1E-27 198.1 29.0 281 115-479 54-336 (337)
122 3nyt_A Aminotransferase WBPE; 99.9 7.6E-25 2.6E-29 214.3 15.4 301 115-476 38-360 (367)
123 1jg8_A L-ALLO-threonine aldola 99.9 2.6E-24 9E-29 208.7 18.7 295 116-479 42-345 (347)
124 2r2n_A Kynurenine/alpha-aminoa 99.9 2.8E-23 9.5E-28 207.2 26.6 320 104-479 74-423 (425)
125 1mdo_A ARNB aminotransferase; 99.9 1.6E-23 5.5E-28 206.7 23.8 309 114-479 41-385 (393)
126 2c0r_A PSAT, phosphoserine ami 99.9 4.5E-24 1.5E-28 208.4 19.4 334 74-479 5-360 (362)
127 3qhx_A Cystathionine gamma-syn 99.9 1.8E-23 6.2E-28 206.0 23.6 219 112-393 66-290 (392)
128 1o69_A Aminotransferase; struc 99.9 6E-23 2.1E-27 202.7 27.2 317 114-478 34-385 (394)
129 1gc0_A Methionine gamma-lyase; 99.9 2.6E-23 8.8E-28 205.6 24.5 284 112-476 65-397 (398)
130 2x3l_A ORN/Lys/Arg decarboxyla 99.9 7.5E-25 2.6E-29 219.3 13.6 288 112-479 57-352 (446)
131 2rfv_A Methionine gamma-lyase; 99.9 2E-23 7E-28 206.4 23.5 287 111-476 63-396 (398)
132 1cs1_A CGS, protein (cystathio 99.9 6.9E-23 2.3E-27 201.8 26.9 284 114-478 54-385 (386)
133 3rq1_A Aminotransferase class 99.9 1.5E-23 5.1E-28 208.8 22.3 343 70-479 43-414 (418)
134 3gbx_A Serine hydroxymethyltra 99.9 5.9E-24 2E-28 211.7 19.2 306 110-479 74-395 (420)
135 3e2y_A Kynurenine-oxoglutarate 99.9 1.8E-23 6.1E-28 207.6 22.4 335 90-476 42-409 (410)
136 2po3_A 4-dehydrase; external a 99.9 1.8E-22 6.3E-27 201.2 29.3 301 115-478 55-384 (424)
137 2x5f_A Aspartate_tyrosine_phen 99.9 3.2E-23 1.1E-27 207.2 23.6 314 103-479 83-428 (430)
138 2vyc_A Biodegradative arginine 99.9 1.1E-23 3.8E-28 222.3 20.9 315 114-478 207-603 (755)
139 1e5e_A MGL, methionine gamma-l 99.9 1.5E-22 5.2E-27 200.2 26.7 216 112-390 62-285 (404)
140 3ihj_A Alanine aminotransferas 99.9 1E-22 3.5E-27 206.6 25.8 334 101-479 122-492 (498)
141 1pff_A Methionine gamma-lyase; 99.9 2.1E-23 7.1E-28 201.1 19.6 280 116-476 2-330 (331)
142 3ruy_A Ornithine aminotransfer 99.9 2.3E-22 7.9E-27 198.4 27.4 297 112-477 78-391 (392)
143 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.3E-22 1.1E-26 197.2 28.5 309 115-473 37-389 (390)
144 1vef_A Acetylornithine/acetyl- 99.9 9.5E-23 3.2E-27 201.4 24.6 294 111-478 86-395 (395)
145 1w23_A Phosphoserine aminotran 99.9 4.9E-24 1.7E-28 207.9 15.1 307 107-479 43-359 (360)
146 3t18_A Aminotransferase class 99.9 1.7E-22 5.7E-27 200.9 24.9 343 69-477 41-411 (413)
147 3lws_A Aromatic amino acid bet 99.9 1.3E-22 4.4E-27 197.6 22.8 332 71-477 10-356 (357)
148 3ecd_A Serine hydroxymethyltra 99.9 1.2E-22 3.9E-27 202.7 22.7 303 112-478 78-395 (425)
149 1c4k_A Protein (ornithine deca 99.9 3.3E-23 1.1E-27 216.6 19.4 324 114-478 175-564 (730)
150 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.5E-21 5.1E-26 196.6 30.2 319 103-479 70-430 (456)
151 3acz_A Methionine gamma-lyase; 99.9 3.6E-22 1.2E-26 196.7 24.8 217 112-391 59-281 (389)
152 1qgn_A Protein (cystathionine 99.9 5.9E-22 2E-26 197.0 26.5 217 112-392 114-338 (445)
153 1ax4_A Tryptophanase; tryptoph 99.9 4E-22 1.4E-26 201.4 25.5 353 74-478 44-439 (467)
154 1s0a_A Adenosylmethionine-8-am 99.9 2.3E-21 8E-26 193.6 30.7 309 113-479 87-423 (429)
155 3if2_A Aminotransferase; YP_26 99.9 1.7E-22 5.7E-27 202.9 21.8 317 103-479 78-439 (444)
156 3ju7_A Putative PLP-dependent 99.9 7.5E-22 2.6E-26 193.2 25.8 309 107-478 35-373 (377)
157 3fsl_A Aromatic-amino-acid ami 99.9 1.9E-22 6.4E-27 199.4 20.4 339 70-476 31-396 (397)
158 3qgu_A LL-diaminopimelate amin 99.9 1.4E-21 4.7E-26 196.4 26.6 314 102-479 105-439 (449)
159 3ndn_A O-succinylhomoserine su 99.9 3.3E-22 1.1E-26 197.8 21.7 221 112-395 81-307 (414)
160 2fq6_A Cystathionine beta-lyas 99.9 1.9E-21 6.6E-26 192.2 26.6 285 115-476 85-414 (415)
161 3ri6_A O-acetylhomoserine sulf 99.9 5.7E-22 2E-26 196.6 22.7 231 114-396 84-329 (430)
162 3h7f_A Serine hydroxymethyltra 99.9 4.8E-22 1.6E-26 199.4 22.2 307 109-478 88-412 (447)
163 2eh6_A Acoat, acetylornithine 99.9 9.1E-22 3.1E-26 192.9 23.7 289 114-476 72-374 (375)
164 3fkd_A L-threonine-O-3-phospha 99.9 9.3E-22 3.2E-26 191.0 23.4 281 116-479 54-341 (350)
165 3ei9_A LL-diaminopimelate amin 99.9 6.4E-22 2.2E-26 197.9 22.5 305 103-477 93-425 (432)
166 3nx3_A Acoat, acetylornithine 99.9 6.2E-21 2.1E-25 188.4 29.1 301 111-480 77-395 (395)
167 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2E-21 6.9E-26 194.4 25.8 320 115-478 65-434 (437)
168 2eo5_A 419AA long hypothetical 99.9 7.3E-21 2.5E-25 189.3 29.6 299 112-479 86-417 (419)
169 3i4j_A Aminotransferase, class 99.9 3.3E-21 1.1E-25 192.6 26.7 330 110-479 70-427 (430)
170 2ctz_A O-acetyl-L-homoserine s 99.9 5.9E-21 2E-25 189.8 28.1 240 112-393 58-315 (421)
171 3n5m_A Adenosylmethionine-8-am 99.9 1.8E-20 6.2E-25 188.4 31.3 330 110-480 89-452 (452)
172 3cog_A Cystathionine gamma-lya 99.9 2.1E-21 7E-26 191.9 23.5 282 115-478 70-400 (403)
173 3ez1_A Aminotransferase MOCR f 99.9 1.3E-21 4.6E-26 195.0 22.4 308 116-479 74-414 (423)
174 3b1d_A Betac-S lyase; HET: PLP 99.8 1.1E-24 3.7E-29 215.1 0.0 309 110-478 68-391 (392)
175 3g7q_A Valine-pyruvate aminotr 99.9 8.6E-22 2.9E-26 195.9 20.7 315 103-479 70-412 (417)
176 3ppl_A Aspartate aminotransfer 99.9 1.2E-21 4E-26 195.7 21.5 308 116-479 82-419 (427)
177 4f4e_A Aromatic-amino-acid ami 99.9 3.6E-22 1.2E-26 198.9 17.7 340 71-478 55-420 (420)
178 1z7d_A Ornithine aminotransfer 99.9 9.7E-21 3.3E-25 189.0 28.1 305 111-479 106-428 (433)
179 3d6k_A Putative aminotransfera 99.9 9.8E-22 3.3E-26 195.8 20.8 309 117-479 81-417 (422)
180 3dxv_A Alpha-amino-epsilon-cap 99.9 3.4E-21 1.2E-25 193.0 24.8 318 109-479 83-424 (439)
181 2pb2_A Acetylornithine/succiny 99.9 1.5E-21 5.2E-26 194.2 21.8 302 111-479 98-417 (420)
182 2ord_A Acoat, acetylornithine 99.9 3.6E-21 1.2E-25 190.2 24.5 299 111-480 81-397 (397)
183 1uu1_A Histidinol-phosphate am 99.9 3.6E-21 1.2E-25 185.7 23.7 271 115-476 59-334 (335)
184 3pj0_A LMO0305 protein; struct 99.9 2.8E-21 9.6E-26 188.2 22.5 296 114-476 50-358 (359)
185 1n8p_A Cystathionine gamma-lya 99.9 9.1E-22 3.1E-26 193.8 19.2 285 113-477 56-392 (393)
186 2oqx_A Tryptophanase; lyase, p 99.9 6.6E-21 2.3E-25 192.5 25.7 352 74-478 42-440 (467)
187 7aat_A Aspartate aminotransfer 99.9 2.4E-21 8.3E-26 191.7 21.6 342 70-478 33-401 (401)
188 2oat_A Ornithine aminotransfer 99.9 7.7E-21 2.6E-25 190.1 25.1 305 112-480 118-439 (439)
189 1ajs_A Aspartate aminotransfer 99.9 1E-21 3.5E-26 195.1 18.1 325 89-480 53-411 (412)
190 3hmu_A Aminotransferase, class 99.9 2.3E-20 7.9E-25 188.0 28.0 324 111-479 98-451 (472)
191 1yaa_A Aspartate aminotransfer 99.9 4.7E-22 1.6E-26 197.5 15.3 353 54-479 17-410 (412)
192 1ibj_A CBL, cystathionine beta 99.9 6.6E-22 2.3E-26 198.2 16.3 161 113-313 134-300 (464)
193 4a6r_A Omega transaminase; tra 99.9 3E-20 1E-24 187.1 28.0 324 110-479 92-448 (459)
194 3asa_A LL-diaminopimelate amin 99.9 1.4E-21 4.8E-26 193.3 18.0 303 103-479 70-392 (400)
195 3tfu_A Adenosylmethionine-8-am 99.9 9.6E-21 3.3E-25 190.1 24.0 315 111-479 117-452 (457)
196 4adb_A Succinylornithine trans 99.9 1.6E-20 5.5E-25 186.1 25.2 300 112-479 81-399 (406)
197 3i5t_A Aminotransferase; pyrid 99.9 5.6E-20 1.9E-24 185.5 29.4 326 110-479 95-453 (476)
198 2aeu_A Hypothetical protein MJ 99.9 1.1E-21 3.8E-26 192.0 16.1 293 111-479 57-370 (374)
199 3a8u_X Omega-amino acid--pyruv 99.9 3.4E-20 1.2E-24 186.2 26.9 326 111-479 92-446 (449)
200 3meb_A Aspartate aminotransfer 99.9 1.2E-20 4E-25 189.4 23.3 350 54-479 37-443 (448)
201 3gju_A Putative aminotransfera 99.9 6.4E-20 2.2E-24 184.7 28.7 328 111-479 94-455 (460)
202 3dod_A Adenosylmethionine-8-am 99.9 8.9E-20 3E-24 183.1 29.2 325 110-479 85-442 (448)
203 1sff_A 4-aminobutyrate aminotr 99.9 6.7E-20 2.3E-24 182.8 26.2 317 112-479 84-423 (426)
204 1zod_A DGD, 2,2-dialkylglycine 99.9 4.8E-20 1.7E-24 184.2 25.2 320 112-479 85-431 (433)
205 2ay1_A Aroat, aromatic amino a 99.9 3.7E-21 1.3E-25 189.9 16.7 308 102-477 63-393 (394)
206 3oks_A 4-aminobutyrate transam 99.9 1.4E-19 4.7E-24 181.7 28.3 317 110-479 102-450 (451)
207 2q7w_A Aspartate aminotransfer 99.9 1.5E-21 5E-26 192.9 13.6 303 102-476 63-395 (396)
208 4ffc_A 4-aminobutyrate aminotr 99.9 9E-19 3.1E-23 175.8 32.4 318 110-479 105-448 (453)
209 3f6t_A Aspartate aminotransfer 99.9 1.2E-20 4.1E-25 192.9 19.0 361 85-479 117-524 (533)
210 3nmy_A Xometc, cystathionine g 99.9 5.1E-20 1.7E-24 181.3 22.5 217 115-395 70-294 (400)
211 3i16_A Aluminum resistance pro 99.8 6.6E-20 2.2E-24 180.8 21.0 222 115-392 76-323 (427)
212 3jzl_A Putative cystathionine 99.8 3.9E-20 1.3E-24 181.9 18.1 223 115-392 62-306 (409)
213 3fq8_A Glutamate-1-semialdehyd 99.8 4.8E-20 1.6E-24 183.9 19.0 315 110-480 90-427 (427)
214 3l44_A Glutamate-1-semialdehyd 99.8 1.7E-19 5.9E-24 180.3 22.1 312 112-479 95-429 (434)
215 2cjg_A L-lysine-epsilon aminot 99.8 1.9E-19 6.6E-24 180.5 21.7 319 111-479 100-447 (449)
216 4eu1_A Mitochondrial aspartate 99.8 1.8E-19 6.1E-24 178.7 20.8 308 97-478 68-409 (409)
217 3k28_A Glutamate-1-semialdehyd 99.8 2.5E-19 8.5E-24 178.8 20.3 312 112-480 93-427 (429)
218 3hvy_A Cystathionine beta-lyas 99.8 3.1E-19 1.1E-23 176.1 20.2 223 115-392 77-323 (427)
219 3n75_A LDC, lysine decarboxyla 99.8 5.4E-19 1.8E-23 183.3 22.3 315 114-477 197-557 (715)
220 4e77_A Glutamate-1-semialdehyd 99.8 2.9E-18 9.9E-23 171.1 26.3 314 112-480 93-429 (429)
221 2epj_A Glutamate-1-semialdehyd 99.8 9.5E-19 3.2E-23 174.9 21.7 310 111-479 95-430 (434)
222 4ao9_A Beta-phenylalanine amin 99.8 3.6E-18 1.2E-22 168.9 22.0 308 112-479 127-445 (454)
223 2cy8_A D-phgat, D-phenylglycin 99.8 2.9E-18 1E-22 172.3 21.6 313 110-479 95-434 (453)
224 1ohv_A 4-aminobutyrate aminotr 99.8 2E-17 7E-22 166.6 26.9 314 111-480 109-471 (472)
225 3bwn_A AT1G70560, L-tryptophan 99.8 4.6E-18 1.6E-22 167.4 20.5 290 102-478 57-385 (391)
226 3ou5_A Serine hydroxymethyltra 99.8 2.1E-17 7.2E-22 158.4 24.1 310 105-477 93-438 (490)
227 4atq_A 4-aminobutyrate transam 99.8 4.7E-16 1.6E-20 154.5 34.9 382 44-479 20-454 (456)
228 4e3q_A Pyruvate transaminase; 99.8 6.6E-18 2.3E-22 168.4 21.2 326 111-479 110-467 (473)
229 3ht4_A Aluminum resistance pro 99.8 1.1E-18 3.6E-23 173.1 15.4 224 114-392 67-312 (431)
230 2e7u_A Glutamate-1-semialdehyd 99.8 1.2E-17 4E-22 166.5 21.8 309 111-476 91-423 (424)
231 3k7y_A Aspartate aminotransfer 99.8 2E-17 6.8E-22 162.9 23.0 306 100-480 64-405 (405)
232 2zy4_A L-aspartate beta-decarb 99.8 3.2E-18 1.1E-22 175.1 16.4 349 103-478 133-520 (546)
233 2hox_A ALLIIN lyase 1; cystein 99.8 2.3E-18 7.9E-23 171.3 14.3 291 110-478 102-423 (427)
234 4h51_A Aspartate aminotransfer 99.7 4.1E-15 1.4E-19 146.4 21.2 338 74-480 53-417 (420)
235 2yky_A Beta-transaminase; tran 99.5 8.6E-18 3E-22 167.4 0.0 311 111-479 139-459 (465)
236 4a0g_A Adenosylmethionine-8-am 99.6 2.8E-14 9.5E-19 151.8 19.2 324 114-480 426-828 (831)
237 1tks_A 3,4-dihydroxy-2-butanon 74.5 4.9 0.00017 34.1 5.5 49 211-259 146-194 (204)
238 2pju_A Propionate catabolism o 69.7 49 0.0017 28.6 11.0 68 168-257 108-175 (225)
239 2q5c_A NTRC family transcripti 67.7 40 0.0014 28.4 9.9 68 168-257 96-163 (196)
240 3mio_A DHBP synthase, 3,4-dihy 66.4 12 0.00043 31.7 6.2 50 210-259 144-194 (206)
241 3l21_A DHDPS, dihydrodipicolin 64.8 9.2 0.00031 35.0 5.7 62 198-259 25-89 (304)
242 3gi1_A LBP, laminin-binding pr 64.0 53 0.0018 29.6 10.6 74 170-258 181-255 (286)
243 3fkr_A L-2-keto-3-deoxyarabona 63.5 8.1 0.00028 35.5 5.0 63 197-259 17-82 (309)
244 1snn_A DHBP synthase, 3,4-dihy 62.8 14 0.00048 31.9 5.9 49 210-259 164-212 (227)
245 2wkj_A N-acetylneuraminate lya 61.9 11 0.00037 34.5 5.6 62 198-259 21-85 (303)
246 3cpr_A Dihydrodipicolinate syn 61.8 12 0.00041 34.3 5.8 62 198-259 26-90 (304)
247 3flu_A DHDPS, dihydrodipicolin 61.4 9.9 0.00034 34.7 5.2 62 198-259 17-81 (297)
248 3hh8_A Metal ABC transporter s 60.8 58 0.002 29.4 10.3 74 170-258 185-259 (294)
249 1f6k_A N-acetylneuraminate lya 60.7 11 0.00039 34.2 5.5 62 198-259 13-78 (293)
250 3dz1_A Dihydrodipicolinate syn 60.6 11 0.00037 34.7 5.4 62 198-259 18-81 (313)
251 1g57_A DHBP synthase, 3,4-dihy 60.1 18 0.0006 31.1 6.1 49 210-259 153-201 (217)
252 1pq4_A Periplasmic binding pro 59.8 67 0.0023 28.9 10.5 73 170-258 192-264 (291)
253 1xky_A Dihydrodipicolinate syn 58.6 12 0.0004 34.3 5.1 61 199-259 23-86 (301)
254 3s5o_A 4-hydroxy-2-oxoglutarat 58.3 11 0.00037 34.6 4.9 62 198-259 24-88 (307)
255 4dpp_A DHDPS 2, dihydrodipicol 57.7 14 0.00049 34.6 5.6 62 198-259 69-133 (360)
256 2prs_A High-affinity zinc upta 56.9 54 0.0019 29.4 9.3 75 170-258 176-250 (284)
257 3na8_A Putative dihydrodipicol 56.8 8.6 0.00029 35.5 3.9 62 198-259 34-98 (315)
258 3tak_A DHDPS, dihydrodipicolin 56.8 10 0.00036 34.4 4.5 62 198-259 11-75 (291)
259 3si9_A DHDPS, dihydrodipicolin 56.6 9.3 0.00032 35.2 4.1 62 198-259 32-96 (315)
260 2r8w_A AGR_C_1641P; APC7498, d 56.6 12 0.00042 34.7 5.0 62 198-259 44-108 (332)
261 3m0z_A Putative aldolase; MCSG 56.4 37 0.0013 29.2 7.3 75 178-263 144-221 (249)
262 3nvt_A 3-deoxy-D-arabino-heptu 56.3 37 0.0013 32.1 8.3 61 206-266 260-323 (385)
263 3qze_A DHDPS, dihydrodipicolin 56.1 10 0.00035 34.9 4.3 62 198-259 33-97 (314)
264 2v9d_A YAGE; dihydrodipicolini 55.9 14 0.00046 34.6 5.2 64 196-259 39-105 (343)
265 3h5d_A DHDPS, dihydrodipicolin 55.5 11 0.00036 34.8 4.3 62 198-259 17-81 (311)
266 2ojp_A DHDPS, dihydrodipicolin 55.4 11 0.00039 34.2 4.5 62 198-259 11-75 (292)
267 4g81_D Putative hexonate dehyd 54.4 70 0.0024 28.2 9.4 99 124-240 4-102 (255)
268 3cx3_A Lipoprotein; zinc-bindi 51.7 55 0.0019 29.4 8.5 73 170-257 179-252 (284)
269 3a5f_A Dihydrodipicolinate syn 51.2 16 0.00056 33.1 4.8 60 199-259 13-75 (291)
270 3io5_A Recombination and repai 50.8 1.5E+02 0.0052 27.2 11.6 86 168-259 59-167 (333)
271 2o1e_A YCDH; alpha-beta protei 50.1 69 0.0024 29.2 9.0 73 170-257 192-265 (312)
272 3b4u_A Dihydrodipicolinate syn 50.0 16 0.00055 33.2 4.6 56 198-253 13-68 (294)
273 2hmc_A AGR_L_411P, dihydrodipi 49.1 20 0.00069 33.4 5.1 59 198-259 36-97 (344)
274 1k4i_A 3,4-dihydroxy-2-butanon 48.9 26 0.00088 30.3 5.3 48 211-259 154-212 (233)
275 3ujp_A Mn transporter subunit; 48.7 49 0.0017 30.1 7.7 73 170-257 192-265 (307)
276 3e96_A Dihydrodipicolinate syn 48.2 13 0.00043 34.3 3.6 59 198-259 21-86 (316)
277 2nuw_A 2-keto-3-deoxygluconate 47.6 14 0.00049 33.4 3.8 53 198-253 9-64 (288)
278 4gqr_A Pancreatic alpha-amylas 47.3 8.8 0.0003 37.7 2.6 33 233-265 69-101 (496)
279 3d0c_A Dihydrodipicolinate syn 47.0 15 0.0005 33.9 3.8 59 198-259 21-86 (314)
280 3eb2_A Putative dihydrodipicol 46.7 9.5 0.00032 34.9 2.5 59 198-259 14-78 (300)
281 1w3i_A EDA, 2-keto-3-deoxy glu 46.7 17 0.00059 33.0 4.2 56 198-253 9-64 (293)
282 3qfe_A Putative dihydrodipicol 46.1 13 0.00044 34.3 3.3 61 199-259 21-85 (318)
283 4fgs_A Probable dehydrogenase 44.7 90 0.0031 27.8 8.6 92 131-242 30-121 (273)
284 3m6y_A 4-hydroxy-2-oxoglutarat 44.5 30 0.001 30.1 4.9 73 180-263 169-244 (275)
285 2yxg_A DHDPS, dihydrodipicolin 44.1 18 0.00062 32.7 3.9 60 199-259 12-74 (289)
286 3ff4_A Uncharacterized protein 42.3 27 0.00093 26.9 4.1 43 207-258 67-109 (122)
287 3m5v_A DHDPS, dihydrodipicolin 41.7 17 0.00058 33.2 3.4 60 199-259 19-82 (301)
288 2ehh_A DHDPS, dihydrodipicolin 41.0 20 0.00069 32.5 3.7 60 199-259 12-74 (294)
289 1g94_A Alpha-amylase; beta-alp 40.8 13 0.00044 36.1 2.6 32 233-264 57-88 (448)
290 1o5k_A DHDPS, dihydrodipicolin 38.8 20 0.00069 32.8 3.4 60 199-259 24-86 (306)
291 1gcy_A Glucan 1,4-alpha-maltot 38.7 50 0.0017 32.7 6.5 30 235-264 87-116 (527)
292 2pcq_A Putative dihydrodipicol 36.6 9.6 0.00033 34.5 0.8 57 198-259 8-67 (283)
293 1xvl_A Mn transporter, MNTC pr 36.6 1.2E+02 0.0042 27.6 8.4 74 170-258 206-280 (321)
294 3kts_A Glycerol uptake operon 36.5 17 0.00056 30.7 2.1 49 207-266 18-68 (192)
295 1zco_A 2-dehydro-3-deoxyphosph 36.3 1.2E+02 0.0042 26.8 8.0 62 206-267 141-205 (262)
296 3bh4_A Alpha-amylase; calcium, 36.1 18 0.00061 35.5 2.7 32 233-264 71-102 (483)
297 1mxg_A Alpha amylase; hyperthe 35.8 18 0.00063 34.9 2.7 32 233-264 79-110 (435)
298 1ud2_A Amylase, alpha-amylase; 35.8 18 0.00063 35.4 2.7 32 233-264 73-104 (480)
299 1wpc_A Glucan 1,4-alpha-maltoh 35.3 19 0.00064 35.4 2.7 32 233-264 75-106 (485)
300 1hvx_A Alpha-amylase; hydrolas 34.9 19 0.00066 35.7 2.7 32 233-264 74-105 (515)
301 3rpc_A Possible metal-dependen 34.6 1.6E+02 0.0055 25.7 8.7 78 170-255 162-249 (264)
302 1lwj_A 4-alpha-glucanotransfer 34.1 17 0.00057 35.3 2.1 29 235-263 64-92 (441)
303 3daq_A DHDPS, dihydrodipicolin 33.6 28 0.00094 31.6 3.4 60 199-259 14-76 (292)
304 3dhu_A Alpha-amylase; structur 33.6 19 0.00066 34.9 2.5 30 234-263 77-106 (449)
305 3mfq_A TROA, high-affinity zin 33.5 41 0.0014 30.2 4.5 74 177-259 169-243 (282)
306 3ghf_A Septum site-determining 33.4 1.6E+02 0.0054 22.4 7.4 48 207-258 26-78 (120)
307 3rih_A Short chain dehydrogena 33.3 2.6E+02 0.0088 24.8 10.5 67 170-240 68-135 (293)
308 1toa_A Tromp-1, protein (perip 33.0 1.5E+02 0.0052 26.9 8.3 76 170-257 199-277 (313)
309 2nly_A BH1492 protein, diverge 32.8 2.3E+02 0.0077 24.7 9.0 55 205-259 79-133 (245)
310 1ht6_A AMY1, alpha-amylase iso 32.8 19 0.00066 34.3 2.3 31 235-265 63-93 (405)
311 3oid_A Enoyl-[acyl-carrier-pro 32.6 1.9E+02 0.0065 25.1 8.8 43 194-239 55-97 (258)
312 2guy_A Alpha-amylase A; (beta- 32.3 18 0.00063 35.4 2.1 32 233-264 90-121 (478)
313 3grp_A 3-oxoacyl-(acyl carrier 32.2 2.1E+02 0.007 25.0 9.0 64 170-240 54-117 (266)
314 3edm_A Short chain dehydrogena 32.1 2.5E+02 0.0085 24.3 9.6 62 170-235 35-97 (259)
315 1vs1_A 3-deoxy-7-phosphoheptul 31.8 2.6E+02 0.0088 24.9 9.4 84 176-267 132-220 (276)
316 3is3_A 17BETA-hydroxysteroid d 31.4 1.5E+02 0.0052 25.9 8.0 44 194-240 69-112 (270)
317 2r91_A 2-keto-3-deoxy-(6-phosp 31.3 25 0.00086 31.7 2.7 54 199-253 10-63 (286)
318 1vr6_A Phospho-2-dehydro-3-deo 31.0 2.2E+02 0.0075 26.4 9.0 64 203-267 220-288 (350)
319 4aie_A Glucan 1,6-alpha-glucos 31.0 21 0.00072 35.5 2.3 29 235-263 74-102 (549)
320 1v77_A PH1877P, hypothetical p 30.9 61 0.0021 27.6 5.0 84 173-266 81-173 (212)
321 3bzy_B ESCU; auto cleavage pro 30.9 27 0.00093 24.8 2.2 19 243-261 29-47 (83)
322 2dh2_A 4F2 cell-surface antige 30.2 21 0.00072 34.4 2.1 29 235-263 76-104 (424)
323 2rfg_A Dihydrodipicolinate syn 30.1 24 0.00082 32.1 2.3 23 202-224 14-36 (297)
324 3vup_A Beta-1,4-mannanase; TIM 30.1 54 0.0018 29.6 4.9 55 207-261 40-110 (351)
325 3ezl_A Acetoacetyl-COA reducta 29.9 2.3E+02 0.008 24.2 9.0 44 194-240 64-107 (256)
326 1wza_A Alpha-amylase A; hydrol 29.9 21 0.00073 35.0 2.1 29 235-263 76-104 (488)
327 1jae_A Alpha-amylase; glycosid 29.7 19 0.00065 35.2 1.7 33 232-264 66-98 (471)
328 3osu_A 3-oxoacyl-[acyl-carrier 29.4 2E+02 0.007 24.5 8.4 44 194-240 55-98 (246)
329 2qv5_A AGR_C_5032P, uncharacte 29.2 2.1E+02 0.0073 25.2 8.2 55 205-259 106-160 (261)
330 2z1k_A (NEO)pullulanase; hydro 29.2 21 0.00073 34.9 1.9 25 237-261 93-117 (475)
331 3u5t_A 3-oxoacyl-[acyl-carrier 29.0 1.7E+02 0.0059 25.6 7.9 44 194-240 78-121 (267)
332 3gk3_A Acetoacetyl-COA reducta 28.8 2.5E+02 0.0087 24.3 9.1 44 194-240 76-119 (269)
333 4dqx_A Probable oxidoreductase 28.8 2.2E+02 0.0076 25.0 8.7 64 170-240 54-117 (277)
334 4dmm_A 3-oxoacyl-[acyl-carrier 28.7 1.8E+02 0.0062 25.4 8.0 43 194-239 79-121 (269)
335 4ibo_A Gluconate dehydrogenase 28.6 2.2E+02 0.0077 24.8 8.6 43 194-239 76-118 (271)
336 1f2d_A 1-aminocyclopropane-1-c 28.6 2.1E+02 0.0071 26.2 8.7 31 168-201 94-135 (341)
337 3rwb_A TPLDH, pyridoxal 4-dehy 28.6 2E+02 0.0068 24.7 8.2 64 170-240 33-96 (247)
338 2aaa_A Alpha-amylase; glycosid 28.6 21 0.00072 35.0 1.8 32 233-264 90-121 (484)
339 3v2g_A 3-oxoacyl-[acyl-carrier 28.5 1.7E+02 0.0059 25.6 7.9 43 194-239 82-124 (271)
340 1vp8_A Hypothetical protein AF 28.1 2.6E+02 0.009 23.3 9.6 102 131-251 17-133 (201)
341 3imf_A Short chain dehydrogena 27.9 2.8E+02 0.0095 23.9 9.1 66 170-239 33-98 (257)
342 1j0h_A Neopullulanase; beta-al 27.5 25 0.00084 35.6 2.1 30 235-264 217-246 (588)
343 3h7a_A Short chain dehydrogena 27.4 2.8E+02 0.0096 23.8 9.0 43 194-240 57-99 (252)
344 3lyl_A 3-oxoacyl-(acyl-carrier 27.3 2.5E+02 0.0087 23.8 8.7 44 194-240 55-98 (247)
345 2wc7_A Alpha amylase, catalyti 27.0 22 0.00075 34.9 1.6 15 208-222 102-116 (488)
346 2d59_A Hypothetical protein PH 26.9 93 0.0032 24.5 5.1 50 207-265 86-135 (144)
347 1iuk_A Hypothetical protein TT 26.7 39 0.0013 26.6 2.8 49 208-265 80-128 (140)
348 3bc9_A AMYB, alpha amylase, ca 26.6 31 0.0011 34.9 2.7 31 234-264 202-232 (599)
349 1m53_A Isomaltulose synthase; 26.4 25 0.00087 35.3 1.9 18 207-224 91-108 (570)
350 1ea9_C Cyclomaltodextrinase; h 26.3 27 0.00093 35.2 2.1 31 234-264 212-242 (583)
351 1n91_A ORF, hypothetical prote 26.0 81 0.0028 23.6 4.2 33 108-140 46-78 (108)
352 3gvc_A Oxidoreductase, probabl 26.0 2.3E+02 0.008 24.8 8.3 64 170-240 56-119 (277)
353 1zja_A Trehalulose synthase; s 25.9 27 0.00094 34.9 2.1 17 207-223 78-94 (557)
354 3pk0_A Short-chain dehydrogena 25.9 3.1E+02 0.011 23.6 9.1 44 194-240 61-104 (262)
355 1wzl_A Alpha-amylase II; pullu 25.9 25 0.00085 35.5 1.8 29 236-264 215-243 (585)
356 4iiu_A 3-oxoacyl-[acyl-carrier 25.7 2.3E+02 0.0079 24.5 8.2 43 194-239 77-119 (267)
357 1ua7_A Alpha-amylase; beta-alp 25.6 21 0.00072 34.3 1.1 27 237-263 71-97 (422)
358 4iin_A 3-ketoacyl-acyl carrier 25.5 2.3E+02 0.0078 24.6 8.1 44 194-240 80-123 (271)
359 3t7y_A YOP proteins translocat 25.5 36 0.0012 25.0 2.1 20 243-262 44-63 (97)
360 2ab1_A Hypothetical protein; H 25.1 67 0.0023 24.6 3.7 49 205-261 48-96 (122)
361 1j0a_A 1-aminocyclopropane-1-c 25.0 1.4E+02 0.0049 27.1 6.8 31 168-201 97-128 (325)
362 1uok_A Oligo-1,6-glucosidase; 25.0 30 0.001 34.7 2.2 18 207-224 77-94 (558)
363 3edf_A FSPCMD, cyclomaltodextr 24.8 32 0.0011 34.9 2.3 30 235-264 193-222 (601)
364 4e6p_A Probable sorbitol dehyd 24.6 3E+02 0.01 23.7 8.6 64 170-240 35-98 (259)
365 2ioj_A Hypothetical protein AF 24.5 70 0.0024 24.9 3.9 29 225-259 75-103 (139)
366 1g5a_A Amylosucrase; glycosylt 24.5 35 0.0012 34.8 2.6 32 233-264 155-186 (628)
367 3sju_A Keto reductase; short-c 24.2 2.3E+02 0.0079 24.9 7.9 67 170-240 51-117 (279)
368 4aef_A Neopullulanase (alpha-a 24.1 29 0.001 35.5 1.9 32 233-264 278-309 (645)
369 1qho_A Alpha-amylase; glycosid 24.0 33 0.0011 35.4 2.3 31 234-264 101-131 (686)
370 1d3c_A Cyclodextrin glycosyltr 23.9 33 0.0011 35.4 2.3 31 234-264 109-139 (686)
371 3c01_E Surface presentation of 23.7 41 0.0014 24.8 2.1 19 243-261 29-47 (98)
372 2ze0_A Alpha-glucosidase; TIM 23.6 31 0.0011 34.6 1.9 17 375-392 345-361 (555)
373 1y81_A Conserved hypothetical 23.5 1.5E+02 0.0051 23.1 5.7 50 207-265 78-127 (138)
374 2vt1_B Surface presentation of 23.4 44 0.0015 24.3 2.2 19 243-261 29-47 (93)
375 3kl7_A Putative metal-dependen 23.4 1.7E+02 0.0058 25.1 6.6 55 194-258 176-230 (235)
376 3tfo_A Putative 3-oxoacyl-(acy 23.4 2E+02 0.0068 25.1 7.2 44 194-240 54-97 (264)
377 2bhu_A Maltooligosyltrehalose 23.3 31 0.0011 34.9 1.9 30 235-264 187-216 (602)
378 2zic_A Dextran glucosidase; TI 23.2 29 0.001 34.6 1.7 17 207-223 77-93 (543)
379 1cyg_A Cyclodextrin glucanotra 23.2 34 0.0012 35.3 2.2 31 233-263 104-134 (680)
380 1tzj_A ACC deaminase, 1-aminoc 23.1 1.3E+02 0.0045 27.5 6.1 31 168-201 94-132 (338)
381 3ijr_A Oxidoreductase, short c 23.0 3.4E+02 0.012 23.9 8.9 38 194-234 98-135 (291)
382 3czg_A Sucrose hydrolase; (alp 22.9 37 0.0013 34.7 2.4 30 235-264 150-179 (644)
383 3v2h_A D-beta-hydroxybutyrate 22.9 3.5E+02 0.012 23.6 8.9 68 170-240 52-120 (281)
384 3bmv_A Cyclomaltodextrin gluca 22.9 36 0.0012 35.1 2.3 29 235-263 111-139 (683)
385 3zss_A Putative glucanohydrola 22.8 40 0.0014 34.8 2.7 28 237-264 317-344 (695)
386 3aj7_A Oligo-1,6-glucosidase; 22.8 34 0.0012 34.5 2.1 28 236-263 83-110 (589)
387 3i4f_A 3-oxoacyl-[acyl-carrier 22.8 2.3E+02 0.0077 24.5 7.5 61 170-233 34-94 (264)
388 1m7x_A 1,4-alpha-glucan branch 22.5 33 0.0011 34.9 1.9 31 234-264 198-228 (617)
389 3vgf_A Malto-oligosyltrehalose 22.4 30 0.001 34.7 1.6 32 233-264 160-191 (558)
390 4aee_A Alpha amylase, catalyti 22.2 34 0.0012 35.4 1.9 56 207-264 263-335 (696)
391 1x7f_A Outer surface protein; 21.8 1.1E+02 0.0039 28.7 5.2 60 207-266 39-99 (385)
392 3m07_A Putative alpha amylase; 21.6 37 0.0013 34.5 2.1 30 235-264 197-226 (618)
393 2vc6_A MOSA, dihydrodipicolina 21.4 34 0.0011 31.0 1.6 57 199-259 12-74 (292)
394 2p0o_A Hypothetical protein DU 21.2 1.5E+02 0.0051 27.7 5.9 60 207-266 15-75 (372)
395 4f6o_A Metacaspase-1; rossmann 21.2 79 0.0027 29.4 4.0 19 253-271 185-203 (350)
396 3o38_A Short chain dehydrogena 21.1 3.4E+02 0.012 23.3 8.3 44 194-240 74-117 (266)
397 4eso_A Putative oxidoreductase 21.0 2.7E+02 0.0092 24.0 7.6 63 170-239 35-97 (255)
398 3ie7_A LIN2199 protein; phosph 20.9 4.4E+02 0.015 23.4 10.5 58 205-263 114-172 (320)
399 2fcg_F Cationic, antibacterial 20.8 1.1E+02 0.0037 16.2 2.9 18 7-24 4-21 (26)
400 3vc3_A Beta-cyanoalnine syntha 20.7 81 0.0028 29.2 4.1 53 131-200 89-141 (344)
401 1y80_A Predicted cobalamin bin 20.6 2.1E+02 0.0072 23.9 6.5 58 194-262 118-179 (210)
402 3r1i_A Short-chain type dehydr 20.5 3.3E+02 0.011 23.7 8.2 44 194-240 82-125 (276)
403 3pgx_A Carveol dehydrogenase; 20.5 4E+02 0.014 23.1 8.8 43 194-239 78-120 (280)
404 3lou_A Formyltetrahydrofolate 20.2 3.5E+02 0.012 24.2 8.1 75 111-201 70-152 (292)
405 3tjr_A Short chain dehydrogena 20.2 2.2E+02 0.0076 25.3 7.0 44 194-240 81-124 (301)
406 4fn4_A Short chain dehydrogena 20.2 2.6E+02 0.0089 24.4 7.1 19 371-391 164-182 (254)
407 3k1d_A 1,4-alpha-glucan-branch 20.2 40 0.0014 34.9 2.0 60 206-265 260-337 (722)
No 1
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=4e-68 Score=541.92 Aligned_cols=475 Identities=58% Similarity=1.061 Sum_probs=425.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHh---cCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccc
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAM---LDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQL 79 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~ 79 (480)
+.++++++++|++++|+++..+++.+|.++++|++++.. ++..+|++|.+++++++++++++.+++++.||+|++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~~~ 102 (511)
T 3vp6_A 23 QTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQL 102 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCCTTSTTEESSS
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCceEee
Confidence 357899999999999999998777788899999999999 89999999999999999999999999999999999999
Q ss_pred cCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHhcCchh
Q psy12303 80 SCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHKMFPTY 157 (480)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~ 157 (480)
+++..+++++++++.+.+|++...|..+|..+++|+++++|+++++|++ ..+++||+|||+||+.++.+++++++++.
T Consensus 103 ~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 182 (511)
T 3vp6_A 103 STGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEV 182 (511)
T ss_dssp SCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHH
T ss_pred cCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999999999999999997 46899999999999999999999887777
Q ss_pred HhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc
Q psy12303 158 KEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL 237 (480)
Q Consensus 158 ~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~ 237 (480)
++.|+...| +.+|+++..+|+|+.++++.+|++..+++.||++++++||+++|+++|+++.++|.+|++|++++++|++
T Consensus 183 ~~~G~~~~~-~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~ 261 (511)
T 3vp6_A 183 KTKGMAAVP-KLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVY 261 (511)
T ss_dssp HHHCGGGSC-CEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSS
T ss_pred hhcCcccCC-CeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCC
Confidence 778865555 4489999999999999999999877689999999999999999999999998889999999999999999
Q ss_pred ccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc
Q psy12303 238 GAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 238 G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~ 317 (480)
|.++|+++|+++|++||+|+|||+||+++.+.++.++. .+.|++++|++++++|||+++|.+||+++++++..+.....
T Consensus 262 G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~-~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~ 340 (511)
T 3vp6_A 262 GAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH-KLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQ 340 (511)
T ss_dssp CCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG-GGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHC
T ss_pred cccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhh-hccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhc
Confidence 99999999999999999999999999999998888777 78888899999999999999999999999999887777777
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~ 395 (480)
..+.|+......+...+++++++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .||++++. +|
T Consensus 341 ~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~-~pg~~l~~~~~p 419 (511)
T 3vp6_A 341 MHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNGEP 419 (511)
T ss_dssp CCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTEEESSSSCC
T ss_pred cCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecCCC
Confidence 7888987765555556778889999999999999999999999999999999999999999999999 89999987 68
Q ss_pred ceeEEEEEeecCccCCCchh-hHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHE-KRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~-~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..++++|++.|...++...+ .....++..+.++.++|.++|.+++.+....+..+++|++++++.+|++||+.+++.|+
T Consensus 420 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~ 499 (511)
T 3vp6_A 420 EHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIE 499 (511)
T ss_dssp SSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred CeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 89999999988765433222 23334555567899999999988887655555346899997699999999999999999
Q ss_pred HhhccC
Q psy12303 475 RLGHDL 480 (480)
Q Consensus 475 ~~~~~l 480 (480)
++.++|
T Consensus 500 ~~~~~~ 505 (511)
T 3vp6_A 500 RLGQDL 505 (511)
T ss_dssp HHHC--
T ss_pred HHHHhh
Confidence 988764
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.2e-65 Score=519.21 Aligned_cols=451 Identities=25% Similarity=0.372 Sum_probs=379.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcc-CCccCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLK-YQVRTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~-~~~~~~~p~~~~~~~~ 81 (480)
+-++.+++++|++++|++++.++ ||.+.++|+++++.++..+|++|.+++++++++++.+. ...+|.||+|++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (475)
T 3k40_A 5 EFKDFAKTMVDFIAEYLENIRER--RVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPT 82 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGS--CSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHhccccC--CCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCC
Confidence 56889999999999999998864 89999999999999999999999999999999988654 5557899999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC---------CeEECCChhHHHHHHHHHHHHh
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG---------DSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~---------~~~~t~ggt~a~~~al~~~~~~ 152 (480)
+..+++++++++.+.+|++...|..+|..+++|+++++|+++++|++.. +++||+|||+||+.++.++|++
T Consensus 83 ~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~ 162 (475)
T 3k40_A 83 ANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAK 162 (475)
T ss_dssp CCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999752 6999999999999999999987
Q ss_pred cCchhHhcCCC-----ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEE
Q psy12303 153 MFPTYKEKGLS-----AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFF 227 (480)
Q Consensus 153 ~~~~~~~~g~~-----~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~ 227 (480)
..+..+..|.. ..| +.+|+++..+|+|+.+++...|+ +++.||+++++ +|+++|+++|+++.+++..|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~-~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~ 237 (475)
T 3k40_A 163 KLKEVKELHPEWDEHTILG-KLVGYCSDQAHSSVERAGLLGGV---KLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFY 237 (475)
T ss_dssp HHHHHHHHCTTSCHHHHHH-HEEEEEETTSCHHHHHHHHHHTC---EEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhccCcccccccccC-CeEEEECCCchHHHHHHHHHcCC---ceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEE
Confidence 54332222210 012 45899999999999999999988 89999999999 9999999999998888888999
Q ss_pred EEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEe
Q psy12303 228 VNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 228 v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+..+. .+.+++.+|++++++|||+++|+++|+++++
T Consensus 238 v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~-~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~ 316 (475)
T 3k40_A 238 AVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRH-LMKGIESADSFNFNPHKWMLVNFDCSAMWLK 316 (475)
T ss_dssp EEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGG-GGTTGGGCSEEEECHHHHSSCCSSCEEEEES
T ss_pred EEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHH-HhcCcccCCEEEECchhccCCCCceEEEEEe
Confidence 999999999999999999999999999999999999998887777666 6778888999999999999999999999999
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
++..+.......+.|+..... ...+++.+++++++|++.++++|++++.+|.+++++++++.+++++++.+.|++ .|
T Consensus 317 ~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~ 393 (475)
T 3k40_A 317 DPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVA-DS 393 (475)
T ss_dssp SGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST
T ss_pred CHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 987765555556777755321 223567788999999999999999999999999999999999999999999999 89
Q ss_pred CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHH
Q psy12303 388 KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~ 467 (480)
+++++.++..++++|++.+.. ..+.++.++|.++|.+++.++...+ ..++|+++.++.+|++||+
T Consensus 394 g~~l~~~~~~~iv~f~~~~~~--------------~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~ 458 (475)
T 3k40_A 394 RFELAAEINMGLVCFRLKGSN--------------ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDME 458 (475)
T ss_dssp TEEESSCCBTTEEEEEESSCH--------------HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHH
T ss_pred CEEEecCCceEEEEEEeCCch--------------HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHH
Confidence 999998888999999874321 1135778889999988888877777 6899999888999999999
Q ss_pred HHHHHHHHhhcc
Q psy12303 468 FLLTEMDRLGHD 479 (480)
Q Consensus 468 ~~~~~l~~~~~~ 479 (480)
++++.|++++++
T Consensus 459 ~~~~~i~~~~~~ 470 (475)
T 3k40_A 459 YSWKEVSAAADE 470 (475)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 3
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4.4e-64 Score=513.34 Aligned_cols=475 Identities=58% Similarity=1.058 Sum_probs=408.7
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHh---cCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccc
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAM---LDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQL 79 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~ 79 (480)
+.++++++++|++++|++++.+++.||.+.++|+++++. ++..+|++|.+++++++++++++.+++.+.||+|++|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 99 (504)
T 2okj_A 20 QTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQL 99 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCCTTCTTEESSS
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCEEEEc
Confidence 467899999999999999998877789999999999998 89999999999999999999999988888899999999
Q ss_pred cCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHhcCchh
Q psy12303 80 SCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHKMFPTY 157 (480)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~ 157 (480)
+++..+.+++++++.+++|++...|..+|..+++|+++++|+++++|++ ..+++||+|||+||++++.+++++.+++.
T Consensus 100 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~ 179 (504)
T 2okj_A 100 STGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEV 179 (504)
T ss_dssp SCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTH
T ss_pred cCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999998 67899999999999999999998766555
Q ss_pred HhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc
Q psy12303 158 KEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL 237 (480)
Q Consensus 158 ~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~ 237 (480)
++.|....+ +.+|+++..+|+++.+++..+|++..+++.||+++++++|+++|+++|+++.++|.+|++|++++|+|++
T Consensus 180 ~~~G~~~~~-~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~t 258 (504)
T 2okj_A 180 KTKGMAAVP-KLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVY 258 (504)
T ss_dssp HHHCGGGSC-CEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSS
T ss_pred hhcCccccC-CeEEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCC
Confidence 555532212 4489999999999999999999865578999999899999999999999888888889999999999999
Q ss_pred ccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc
Q psy12303 238 GAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 238 G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~ 317 (480)
|.++|+++|+++|++||+|+|||+||+++.+.++.++. .+.+++++|++++++|||+++|+++|+++++++..+.....
T Consensus 259 G~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~-~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~ 337 (504)
T 2okj_A 259 GAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH-KLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQ 337 (504)
T ss_dssp CCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG-GGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHC
T ss_pred CCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHh-hcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhc
Confidence 99999999999999999999999999999987777666 67777789999999999999999999999998766665555
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~ 395 (480)
..++|+.+........+++++++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .++++++. +|
T Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~p 416 (504)
T 2okj_A 338 MCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFNGEP 416 (504)
T ss_dssp CCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTEEESSSSCC
T ss_pred CCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecCCC
Confidence 6778886543322334667888899999999999999999999999999999999999999999999 89999987 58
Q ss_pred ceeEEEEEeecCccCCCc-hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMP-HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~-~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..++++|++.+....+.. ..+....+...+.++.++|.++|.+++.++...+..+++|+++.++.+|++||+++++.|+
T Consensus 417 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~ 496 (504)
T 2okj_A 417 EHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIE 496 (504)
T ss_dssp SSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred CeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 889999998764322111 1122333444456788999999987777655555336999996679999999999999999
Q ss_pred HhhccC
Q psy12303 475 RLGHDL 480 (480)
Q Consensus 475 ~~~~~l 480 (480)
++++++
T Consensus 497 ~~~~~~ 502 (504)
T 2okj_A 497 RLGQDL 502 (504)
T ss_dssp HHHTC-
T ss_pred HHHHHH
Confidence 988764
No 4
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-65 Score=515.27 Aligned_cols=452 Identities=24% Similarity=0.319 Sum_probs=397.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccC-CccCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKY-QVRTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~p~~~~~~~~ 81 (480)
+-++.+++++|++++|++++.+ .||.+.++|+++++.++..+|++|.+++++++++++.+.+ ..+|+||+|++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 87 (481)
T 4e1o_A 10 EYRERGREMVDYICQYLSTVRE--RRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPA 87 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGG--SCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHhcccc--CCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCC
Confidence 4678999999999999999875 4899999999999999999999999999999999887554 457899999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC----------CCeEECCChhHHHHHHHHHHHH
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG----------GDSILAPGGSISNLYAFLAARH 151 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~----------~~~~~t~ggt~a~~~al~~~~~ 151 (480)
+..+++++++++.+.+|.+...|..+|+.+++|+++.+|+++++|++. +++++|+|||+||+.++.++|+
T Consensus 88 ~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~ 167 (481)
T 4e1o_A 88 LTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARK 167 (481)
T ss_dssp CCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999975 2689999999999999999998
Q ss_pred hcCchhHhcCCC-----ccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 152 KMFPTYKEKGLS-----AIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 152 ~~~~~~~~~g~~-----~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.++..+..|.. ..| +.+|+++..+|+|+.+++.+.|. +++.||+++++++|+++|+++|+++..+|..|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~-~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~ 243 (481)
T 4e1o_A 168 NKILEMKTSEPDADESSLNA-RLVAYASDQAHSSVEKAGLISLV---KMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPV 243 (481)
T ss_dssp HHHHHHHHHCTTSCHHHHHT-TEEEEEETTSCHHHHHHHHHHTC---EEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhhcCcccccccccC-CeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcE
Confidence 754433222210 013 45899999999999999998887 899999998999999999999999888888899
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+.++.++. ...|++.+|++++++|||+++|+++|++++
T Consensus 244 ~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~-~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~ 322 (481)
T 4e1o_A 244 FVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRG-FLKGIEYADSFTFNPSKWMMVHFDCTGFWV 322 (481)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGG-GGTTGGGCSEEEECHHHHSSCCSSCEEEEE
T ss_pred EEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHH-HhcCcccCCEEEEChHHhcCCCCceEEEEE
Confidence 9999999999999999999999999999999999999999888887776 777888899999999999999999999999
Q ss_pred eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 307 KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
+++..+.......+.|+..... ...+++.+++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .
T Consensus 323 ~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~ 399 (481)
T 4e1o_A 323 KDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN-D 399 (481)
T ss_dssp SBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred eCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9988776666667778765432 223567788999999999999999999999999999999999999999999999 8
Q ss_pred CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHH
Q psy12303 387 DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 387 ~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di 466 (480)
|+++++.++..++++|++.+.. ..+.++.++|.++|.+++.++...+ ..++|+++.++.+|++||
T Consensus 400 ~g~~~~~~~~~~~v~f~~~~~~--------------~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di 464 (481)
T 4e1o_A 400 PSFEIPAKRHLGLVVFRLKGPN--------------SLTENVLKEIAKAGRLFLIPATIQD-KLIIRFTVTSQFTTRDDI 464 (481)
T ss_dssp TTEECCSCCCSSEEEEEESSCH--------------HHHHHHHHHHHHHCSSBCEEEEETT-EEEEEEECCCTTCCHHHH
T ss_pred CCeEEecCCceeEEEEEeCCch--------------HHHHHHHHHHHhCCeEEEEeeEECC-EEEEEEEeCCCCCCHHHH
Confidence 9999988888999999874311 1135678889999988777777777 689999988899999999
Q ss_pred HHHHHHHHHhhcc
Q psy12303 467 DFLLTEMDRLGHD 479 (480)
Q Consensus 467 ~~~~~~l~~~~~~ 479 (480)
++++++|++++++
T Consensus 465 ~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 465 LRDWNLIRDAATL 477 (481)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 5
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=6.9e-64 Score=512.77 Aligned_cols=475 Identities=48% Similarity=0.916 Sum_probs=403.8
Q ss_pred cHHHHHHHHHHHHHH-HHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLN-YIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~ 81 (480)
+.++++++++|++++ |++++.+.+.||.+.++|++++..++..+|++|.+++++++++++++.++..+.||+|++++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 117 (515)
T 2jis_A 38 AVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFS 117 (515)
T ss_dssp HHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCCTTSTTEESSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCeEEEeeC
Confidence 467899999999999 9999887777999999999999999999999999999999999999988888889999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcC
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKG 161 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g 161 (480)
+..+.+++++++.++.|++...|..+|..+++|.++++|+++++|+++.+++||+|||+||++++.+++++.++..+..|
T Consensus 118 ~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G 197 (515)
T 2jis_A 118 GLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG 197 (515)
T ss_dssp CCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred CCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence 99999999999999999998899999999999999999999999998888999999999999999999876554444344
Q ss_pred CCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc
Q psy12303 162 LSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 162 ~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
....+ +.+|+++..+|+++.+++..+|++..+++.||+++++.+|+++|+++|+++.++|.+|++|++++++|++|.++
T Consensus 198 ~~~~~-~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~ 276 (515)
T 2jis_A 198 LRTLP-PLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD 276 (515)
T ss_dssp GGGSC-CEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred ccccC-CeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc
Confidence 32222 44899999999999999999998655789999998999999999999998887888899999999999999999
Q ss_pred ChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc-hhhHhhhcCCc
Q psy12303 242 PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD-GLLISCNQMSA 320 (480)
Q Consensus 242 ~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~-~~~~~~~~~~~ 320 (480)
|+++|+++|++||+|+|||+||+++.+.++.++. .+.+++++|++++|+|||+++|+++|+++++++ ..+.......+
T Consensus 277 ~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~-~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~ 355 (515)
T 2jis_A 277 PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH-LLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQA 355 (515)
T ss_dssp CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG-GGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC--
T ss_pred CHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh-hcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCc
Confidence 9999999999999999999999999998887766 677888999999999999999999999999987 56665555567
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEE
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNV 400 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v 400 (480)
+|+.+........+++++++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .++++++.+|..+.+
T Consensus 356 ~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~~~~~~~~v 434 (515)
T 2jis_A 356 SYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK-REGFELVMEPEFVNV 434 (515)
T ss_dssp -------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEEESSCCSSSEE
T ss_pred hhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCeeEE
Confidence 7876543333334667888899999999999999999999999999999999999999999999 899999888888889
Q ss_pred EEEeecCccCCC-chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNM-PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~-~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+|++.|....+. +..++...+.+++..+.+++.++|.+++.++...+..+++|++++++.+|++||+++++.|++++++
T Consensus 435 ~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 435 CFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999876533221 1123334454445678889999998877765555535799999558999999999999999998876
Q ss_pred C
Q psy12303 480 L 480 (480)
Q Consensus 480 l 480 (480)
+
T Consensus 515 ~ 515 (515)
T 2jis_A 515 L 515 (515)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=1.4e-60 Score=485.66 Aligned_cols=455 Identities=23% Similarity=0.364 Sum_probs=379.6
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHhhc-cCCccCCCCCccccccC
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDLDIPEKGLPLQKLIDDCFTTL-KYQVRTGHPMFMNQLSC 81 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~-~~~~~~~~p~~~~~~~~ 81 (480)
+-++.+++++|++++|++++.+ .||.+..+|++++..++..+|++|.+++++++++++.+ +...+|.||+|++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (486)
T 1js3_A 5 DFRRRGKEMVDYMADYLEGIEG--RQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPT 82 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGG--SCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHhhccc--CCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCC
Confidence 4678999999999999999885 48999999999999999999999999999999998865 55557899999999999
Q ss_pred CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC---------CCeEECCChhHHHHHHHHHHHHh
Q psy12303 82 GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG---------GDSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~---------~~~~~t~ggt~a~~~al~~~~~~ 152 (480)
+..+++.+++++.+++|++...|..+|..+++|+++++|+++++|++. .++++|+|||+||+.++.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 83 ASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTK 162 (486)
T ss_dssp CCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999974 35899999999999999999875
Q ss_pred cCchhHhc-CCCc---cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 153 MFPTYKEK-GLSA---IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 153 ~~~~~~~~-g~~~---~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
..+..+.. |... ..++.+|+++..+|+++.++++.+|+ +++.||+++++.+|+++|+++|+++.++|..|++|
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~v 239 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDGKFAMRASALQEALERDKAAGLIPFFV 239 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEE
Confidence 32211111 1100 00134688999999999999999998 78999998899999999999999988888888999
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
++++|+|++|.++|+++|+++|++||+|+|||+||+++.+..+.++. .+.+++++|++++++|||+++|+++|++++++
T Consensus 240 v~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~-~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~ 318 (486)
T 1js3_A 240 VATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRH-LLNGVEFADSFNFNPHKWLLVNFDCSAMWVKR 318 (486)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGG-GGTTGGGCSEEEECHHHHSSCCSSCEEEEESC
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHH-HhcCccccCeeEEchhhhcCCCcceEEEEEeC
Confidence 99999999999999999999999999999999999999887776665 66777789999999999999999999999998
Q ss_pred chhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 309 DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
+..+.......+.|+...........++.+++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .|+
T Consensus 319 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~ 397 (486)
T 1js3_A 319 RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQ-DPR 397 (486)
T ss_dssp HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CTT
T ss_pred HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 8654444444566775533211223456677888999999999999999999999999999999999999999999 899
Q ss_pred eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHH
Q psy12303 389 FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDF 468 (480)
Q Consensus 389 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~ 468 (480)
++++.+|..+.++|++.+.. ..+.++.++|.++|.+++.++.+.+ .+++|++++++.+|++||++
T Consensus 398 ~~~~~~~~~~~v~f~~~~~~--------------~~~~~l~~~L~~~g~~~~~~~~~~~-~~~lRi~~~~~~~t~~di~~ 462 (486)
T 1js3_A 398 FEVCAEVTLGLVCFRLKGSD--------------GLNEALLERINSARKIHLVPCRLRG-QFVLRFAICSRKVESGHVRL 462 (486)
T ss_dssp EEECSCCCSSEEEEEESSCH--------------HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHH
T ss_pred eEEeCCCceeEEEEEecChH--------------HHHHHHHHHHHhcCCEEEEEEEECC-EEEEEEEeCCCCCCHHHHHH
Confidence 99987788899999764211 1135677888888977777666666 68999998789999999999
Q ss_pred HHHHHHHhhcc
Q psy12303 469 LLTEMDRLGHD 479 (480)
Q Consensus 469 ~~~~l~~~~~~ 479 (480)
+++.|++++++
T Consensus 463 ~~~~l~~~~~~ 473 (486)
T 1js3_A 463 AWEHIRGLAAE 473 (486)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.3e-58 Score=470.20 Aligned_cols=456 Identities=25% Similarity=0.396 Sum_probs=372.7
Q ss_pred cHHHHHHHHHHHHHHHHHhhccCCCcccCCCCHHHHHHhcCC-CCCCCCCCHHHHHHHHHh-hccCCccCCCCCcccccc
Q psy12303 3 TTETFLKQLVNILLNYIKESNDRNEKVLHFYHPAEMKAMLDL-DIPEKGLPLQKLIDDCFT-TLKYQVRTGHPMFMNQLS 80 (480)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~p~~~~~~~~i~~~~~~-~~~~~~~~~~p~~~~~~~ 80 (480)
..++.+++++|++++|+++.. .| .+...|++++..++. .+|++|.+++++++++++ ++++.+++.||+|++++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~ 108 (497)
T 2qma_A 33 EFASVMSHTTSAMKSVFEQVN---AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLH 108 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSC
T ss_pred HHHHHHHHHHHHHHHHHhhcc---CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCC
Confidence 357889999999999998873 23 567789999998776 589999999999999976 567778899999999999
Q ss_pred CCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcC-----
Q psy12303 81 CGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMF----- 154 (480)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~----- 154 (480)
++..+++++++++....|++...|..+|..+++|+++++|+++++|+++ ..++||+|||+||..++.++|++..
T Consensus 109 ~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 109 TPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp CCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999988999888999999999999999999999999975 7899999999999999999876432
Q ss_pred chhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 155 PTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 155 ~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
++.+..|.....|+.+|+++..+|+|+.+++..+|.+..+++.||+++++.+|+++|+++|+++.++|.+|++|++++++
T Consensus 189 ~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~ 268 (497)
T 2qma_A 189 HSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGT 268 (497)
T ss_dssp CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred cchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence 12223443211135589999999999999999998865478999999899999999999999887777667899999999
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHh
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLIS 314 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~ 314 (480)
|++|.++|+++|.++|++||+|+|||+||+++...++ ++. .+.+++.+|++++|+|||+++|+++|+++++++..+..
T Consensus 269 ~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~-~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~ 346 (497)
T 2qma_A 269 TDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKS-RLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKF 346 (497)
T ss_dssp TTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGG-GGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGG
T ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chH-hhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHH
Confidence 9999999999999999999999999999999988776 554 56777789999999999999999999999998865543
Q ss_pred hhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 315 CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
. .....|+..... ...++..++++++|++.++++|++++.+|.+++++++++..++++++.+.|++ .++++++.+
T Consensus 347 ~-~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~ 421 (497)
T 2qma_A 347 L-LHHADYLNREHD---ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRT-NDQFELLAE 421 (497)
T ss_dssp G-CC-----------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT-CTTEEECSC
T ss_pred h-cCCchhcCCccc---cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEcC
Confidence 2 234556543221 12345567788999999999999999999999999999999999999999999 899999888
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
|..++++|++.+... . .+.++.++.+++.++|.++..++...+ .+++|++++++.+|++||+++++.|+
T Consensus 422 ~~~~~v~f~~~~~~~---~-------~~~l~~~l~~~l~~~G~~~~~~~~~~g-~~~lRis~~~~~~t~edi~~~~~~l~ 490 (497)
T 2qma_A 422 PSLSTVLFRATHETA---D-------LDELNKALRLEALTRGIAVLGETIVDG-KTALKFTILNPCLTTSDFESLLSKIN 490 (497)
T ss_dssp CSSSEEEEEECCSSS---C-------HHHHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCceEEEEEEcCCcc---C-------HHHHHHHHHHHHHhCCCEEEEeeEECC-EEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 888999998764321 0 112235677888899988777666666 57999996699999999999999999
Q ss_pred HhhccC
Q psy12303 475 RLGHDL 480 (480)
Q Consensus 475 ~~~~~l 480 (480)
++++++
T Consensus 491 ~~~~~~ 496 (497)
T 2qma_A 491 MLAVEL 496 (497)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 987654
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=6.4e-46 Score=374.15 Aligned_cols=403 Identities=15% Similarity=0.126 Sum_probs=306.3
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhc--cCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhH
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTL--KYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFI 111 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 111 (480)
+...++..++..+|++|.+++++++++++.+ +....++||.|+. +.. + ..+.+++...++.+...|..+|...
T Consensus 6 ~~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~---~~~-~-~~v~e~~~~a~~~~~~~~~~~~~~~ 80 (452)
T 2dgk_A 6 AKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ---TWD-D-ENVHKLMDLSINKNWIDKEEYPQSA 80 (452)
T ss_dssp ---------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC---CCC-C-HHHHHHHHHTTTCBTTCTTTCHHHH
T ss_pred chHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC---CCc-h-HHHHHHHHHHhccCCCChhhChhHH
Confidence 3445666678899999999999999998876 3444678898885 222 2 3466888888888888888899999
Q ss_pred HHHHHHHHHHHHHhCCCCCC-----eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH
Q psy12303 112 LMETVVLEKMRQIIGWQGGD-----SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~-----~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~ 186 (480)
++|+++++|+++++|++... +++|+|||+||++++.++++++.++.+..|... . +.+|+++. +|+++.+++.
T Consensus 81 ~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~-~-~~~vi~~~-~h~~~~~~~~ 157 (452)
T 2dgk_A 81 AIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPT-D-KPNLVCGP-VQICWHKFAR 157 (452)
T ss_dssp HHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCC-S-CCEEEESS-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-CcEEEECC-CcHHHHHHHH
Confidence 99999999999999998755 899999999999999998864322222334210 1 23788888 9999999999
Q ss_pred HcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc------CcEEEe
Q psy12303 187 VCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY------NMWLHV 259 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~------~~~l~v 259 (480)
.+|+ +++.||+++ ++.+|+++|+++|+++ |++|++++|+|++|.++|+++|.++|+++ |+|+||
T Consensus 158 ~~G~---~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 158 YWDV---ELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HTTC---EEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HcCc---eEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 9998 889999987 7999999999999765 89999999999999999999999999996 999999
Q ss_pred eccccccccc--cccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 260 DAAWGGGLLL--SKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 260 D~a~~~~~~~--~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
|+||+++..+ .+...+ .+ ..+++|++++++|||+++|.++|+++++++..+.......+.|+... ..
T Consensus 229 D~a~~~~~~~~~~~~~~~-~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 297 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVW-DF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IG 297 (452)
T ss_dssp ECTTGGGTHHHHCTTCCC-ST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EE
T ss_pred EcccHHHHHHhhCccchh-hc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CC
Confidence 9999998652 222222 22 25589999999999999999999999988754422222234454321 12
Q ss_pred CccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC----CceeEEEEEeecCccCCC
Q psy12303 338 DKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE----PEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 338 ~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~----~~~~~v~f~~~~~~~~~~ 412 (480)
+++++++|++ .++++|++++.+|.+++++++++..++++++.+.|++ +++++++.+ +..++++|++.+.....
T Consensus 298 ~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~- 375 (452)
T 2dgk_A 298 TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK-LGPYEFICTGRPDEGIPAVCFKLKDGEDPG- 375 (452)
T ss_dssp ECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSSEEEEEECCTTTBSSEEEEEECTTCCCS-
T ss_pred CcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEecCCCCCCCeEEEEEEecCccccc-
Confidence 3345667777 7889999999999999999999999999999999999 888999864 56788899875321000
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEE---EeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMM---VGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~---~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++ ..++.++|.++|+.+ ..+....+ ..++|++ .+..+|++|++++++.|+++++
T Consensus 376 --------~~--~~~l~~~L~~~Gi~v~~~~~~~~~~~-~~~lRis-~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 376 --------YT--LYDLSERLRLRGWQVPAFTLGGEATD-IVVMRIM-CRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp --------CC--HHHHHHHHHHTTCBCCEEECSTTCTT-CEEEEEE-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------CC--HHHHHHHHHhcCCeeeeeeCCcccCC-eEEEEEE-ecCCCCHHHHHHHHHHHHHHHH
Confidence 00 146778888888642 22222223 4699999 6666789999999999988764
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-43 Score=360.07 Aligned_cols=408 Identities=14% Similarity=0.164 Sum_probs=317.4
Q ss_pred CCCCHHHHHHhcCC-CCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChh
Q psy12303 31 HFYHPAEMKAMLDL-DIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPV 109 (480)
Q Consensus 31 ~~~~p~~~~~~~~~-~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 109 (480)
+...+.+++..+|. .+|+.|.+++++++.+++.+.. ..+|+++.....+..+...+.+++...++.+...|..+|.
T Consensus 16 ~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l---~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p~ 92 (502)
T 3hbx_A 16 STFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML---DGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPV 92 (502)
T ss_dssp CTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG---SCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHH
T ss_pred ccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc---CCCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcChh
Confidence 44567778777776 8999999999999999887642 3566643222122222334568888888888888888999
Q ss_pred hHHHHHHHHHHHHHHhCCC--CC---CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 110 FILMETVVLEKMRQIIGWQ--GG---DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~--~~---~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
..++|+++++|+++++|++ +. .+++|+|||+||+.++.+++.++.+..+..|... ++..|+++..+|+++.++
T Consensus 93 ~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~--~~~~vi~~~~~h~s~~~~ 170 (502)
T 3hbx_A 93 TTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPV--DKPNIVTGANVQVCWEKF 170 (502)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCC--SCCEEEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCC--CCcEEEEcCCchHHHHHH
Confidence 9999999999999999998 32 3557999999999999998876443333345421 134899999999999999
Q ss_pred HHHcCCCCCCeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc------CcEE
Q psy12303 185 AAVCGLGTDNCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY------NMWL 257 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~------~~~l 257 (480)
++.+|+ +++.||++++ +.+|+++|+++++++ |++|++++++|++|.++|+++|.++|+++ |+|+
T Consensus 171 ~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l 241 (502)
T 3hbx_A 171 ARYFEV---ELKEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPI 241 (502)
T ss_dssp HHHTTC---EEEEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCE
T ss_pred HHHcCc---eeEEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeE
Confidence 999998 7899999876 999999999999876 89999999999999999999999999999 9999
Q ss_pred Eeecccccccc--ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 258 HVDAAWGGGLL--LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 258 ~vD~a~~~~~~--~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
|||+||+++.. ..+..++ .+ .+.++|++++++|||+++|.++|+++++++..+.......+.|+....
T Consensus 242 ~VD~A~~~~~~p~~~~~~~~-~~-~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~-------- 311 (502)
T 3hbx_A 242 HVDAASGGFIAPFLYPELEW-DF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-------- 311 (502)
T ss_dssp EEECTTGGGTHHHHCTTCCC-ST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE--------
T ss_pred EEECCccchhhhhhCccccc-cc-CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC--------
Confidence 99999998764 2333333 22 256899999999999999999999999988766444434455654321
Q ss_pred CCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCc
Q psy12303 336 TGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 336 ~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~ 413 (480)
..+++.++|+. .++++|++++.+|.+++.+++++..+++++|.+.|++ +++++++.+ +..++++|++.+.. +
T Consensus 312 -~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~~v~f~~~~~~--~-- 385 (502)
T 3hbx_A 312 -PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK-TERFNIVSKDEGVPLVAFSLKDSS--C-- 385 (502)
T ss_dssp -EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEEECSCSSSSSEEEEEESSCS--S--
T ss_pred -CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCCCceEEEEEecCCC--c--
Confidence 12334466665 6789999999999999999999999999999999999 888999876 78889999875321 0
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeee---CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPL---NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~---~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++ ..++.++|.++|+++...... .+ ..++|++ ++..+|++|++.+++.|++++++
T Consensus 386 -------~~--~~~l~~~L~~~Gi~v~~~~~p~~~~~-~~~lRis-v~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 386 -------HT--EFEISDMLRRYGWIVPAYTMPPNAQH-ITVLRVV-IREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp -------CC--HHHHHHHHHTTTCBCCEEECCTTCTT-CEEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CC--HHHHHHHHHhCCcEEeeccCCcccCC-ceEEEEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 10 236778898999764333221 22 4689999 78889999999999999987653
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-40 Score=337.80 Aligned_cols=391 Identities=15% Similarity=0.174 Sum_probs=299.5
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhcc--CCccCCCCCccccccCC-CChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHH
Q psy12303 42 LDLDIPEKGLPLQKLIDDCFTTLK--YQVRTGHPMFMNQLSCG-LDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVL 118 (480)
Q Consensus 42 ~~~~~p~~~~~~~~i~~~~~~~~~--~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~ 118 (480)
....+|++|.+.+++++.++++.. ....+.+|+|+++...+ ......+.+.+..+.+.+...|..+|+..++|++++
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 346789999999999999988765 56778899999985444 334445556666666667788888999999999999
Q ss_pred HHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeE
Q psy12303 119 EKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCV 196 (480)
Q Consensus 119 ~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~ 196 (480)
+|+++++|++ +.++++++|||+|+..+++++++... +..|. +++ +|+++..+|+++.+++..+|+ +++
T Consensus 114 ~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~---~~~g~---~~~-~Vi~~~~~h~~~~~~~~~~G~---~~~ 183 (497)
T 3mc6_A 114 SMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYAL---HHRGI---TEP-EIIAPVTAHAGFDKAAYYFGM---KLR 183 (497)
T ss_dssp HHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHH---HHSCC---SSC-EEEEETTSCHHHHHHHHHSCC---EEE
T ss_pred HHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHH---hcCCC---CCc-eEEEeCCccHHHHHHHHHcCC---eEE
Confidence 9999999998 67899999999999999999987421 11232 224 899999999999999999998 889
Q ss_pred EeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccc---
Q psy12303 197 EVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKK--- 272 (480)
Q Consensus 197 ~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~--- 272 (480)
.||+++ ++.+|+++|+++++++ |++|++++++|++|.++|+++|.++|++||+|+|+|+||+++...+..
T Consensus 184 ~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~ 257 (497)
T 3mc6_A 184 HVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAG 257 (497)
T ss_dssp EECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTT
T ss_pred EEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhc
Confidence 999987 7899999999999765 899999999999999999999999999999999999999977653110
Q ss_pred -ccC-cccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-Cc
Q psy12303 273 -YRH-PRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DI 349 (480)
Q Consensus 273 -~~~-~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~ 349 (480)
... +......++|++++++||++++|.++|+++++++..........+.|... .++..++.++|.. ..
T Consensus 258 ~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~ 328 (497)
T 3mc6_A 258 YKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG---------LYGSPTLAGSRPGAIV 328 (497)
T ss_dssp CCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS---------CBCCSSSCSSCBHHHH
T ss_pred ccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC---------CcCCcCcccCCcchhH
Confidence 000 01112236899999999999999999999988875443221112222211 1123333333322 35
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 350 FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 350 l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
+++|++++.++.+++++++++..++++++.+.|++.++|++++.+|..+.++|... ... ..++.
T Consensus 329 ~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~--~~~--------------~~~l~ 392 (497)
T 3mc6_A 329 VGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK--TLN--------------IHELS 392 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT--TTT--------------HHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC--CCC--------------HHHHH
Confidence 67999999999999999999999999999999998228999987888888888531 110 24677
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.|.++|+.+... .. ...+|++ .+ .+|++|++++++.|++++++
T Consensus 393 ~~L~~~Gi~v~~~---~~-~~~~ri~-~~-~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 393 DRLSKKGWHFNAL---QK-PVALHMA-FT-RLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp HHHHTTTCBCEEC---CS-SCCEEEE-CC-TTTTCTHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEecC---CC-CCeEEEE-Ee-CCCHHHHHHHHHHHHHHHHH
Confidence 8888898544322 12 3578999 44 67999999999999987653
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=6.4e-39 Score=328.21 Aligned_cols=390 Identities=17% Similarity=0.202 Sum_probs=297.9
Q ss_pred CCCCCCCCCCHHHHHHHHHhhc-cCCccCCCCCccccccC-CCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHH
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTL-KYQVRTGHPMFMNQLSC-GLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEK 120 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~-~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~ 120 (480)
...+|++|.+.+++++++++.+ .....|.+++|++++.. ...+...+.+.+....+.+...+..+|...++|.++++|
T Consensus 68 ~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~ 147 (514)
T 3mad_A 68 HARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAM 147 (514)
T ss_dssp CSSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHH
Confidence 3567899999999999998875 34446888999988654 345566777888888888888888899999999999999
Q ss_pred HHHHhCCCC--CCe--EECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeE
Q psy12303 121 MRQIIGWQG--GDS--ILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCV 196 (480)
Q Consensus 121 la~~~g~~~--~~~--~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~ 196 (480)
+++++|++. .++ ++|+|||+||..++++++... .+..|. + +.+|+++..+|+++.+++..+|+ +++
T Consensus 148 la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g---~~~~g~---~-~d~Vi~~~~~~~~~~~~~~~~G~---~v~ 217 (514)
T 3mad_A 148 TAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWA---RATKGI---T-APEAVVPVSAHAAFDKAAQYFGI---KLV 217 (514)
T ss_dssp HHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHH---HHHHCC---S-SCEEEEETTSCTHHHHHHHHHTC---EEE
T ss_pred HHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHh---hhhcCC---C-CCeEEEeCccchHHHHHHHHcCC---eeE
Confidence 999999973 455 999999999999999998741 111232 2 23899999999999999999998 789
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc-cccc-
Q psy12303 197 EVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS-KKYR- 274 (480)
Q Consensus 197 ~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~-~~~~- 274 (480)
.||+++++.+|+++|+++++++ +++|++++++|++|.++|+++|.++|++||+|+|+|+||+++..+. ....
T Consensus 218 ~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~ 291 (514)
T 3mad_A 218 RTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGY 291 (514)
T ss_dssp EECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTC
T ss_pred EeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCC
Confidence 9999999999999999999765 8999999999999999999999999999999999999999876521 0000
Q ss_pred -C-cccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchH
Q psy12303 275 -H-PRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFK 351 (480)
Q Consensus 275 -~-~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~ 351 (480)
. +......++|++++++||++++|.++|+++++++............|.... +...++.+++.. ..++
T Consensus 292 ~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~gs~~~~~~~a 362 (514)
T 3mad_A 292 PVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGL---------YFSPTFAGSRPGALSAT 362 (514)
T ss_dssp CCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCS---------EEESSSCSSCCHHHHHH
T ss_pred CCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCc---------ccCCccCCCCchHHHHH
Confidence 0 011123378999999999999899999999988765432211111111100 011223334433 3578
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
+|++++.++.+++++++++..++++++.+.|++ +++++++.++ .+.+.|. ..... ..++.++
T Consensus 363 ~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-~~~~~~~--~~~~~--------------~~~l~~~ 424 (514)
T 3mad_A 363 AWAAMLSLGEEGYLDATRRILQAADRLKAGVRA-IPSLKILGDP-LWVIAVA--SDELN--------------IYQVMEE 424 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCEESSCC-SSEEEEE--CSSSC--------------HHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeCCC-eEEEEEe--CCCCC--------------HHHHHHH
Confidence 999999999999999999999999999999999 8999987655 3444442 22111 2467788
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.++|+.+ . .... .+++|+++.+..+++++|+++++.|++++++
T Consensus 425 L~~~Gi~v-~--g~~~-~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 425 MAGRGWRL-N--GLHR-PPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp HHTTTCBC-E--EETT-TTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred HHhcCCEe-c--cCCC-CCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 88888654 2 2222 4689999666778889999999999987653
No 12
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.8e-37 Score=306.97 Aligned_cols=385 Identities=19% Similarity=0.216 Sum_probs=294.6
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHH
Q psy12303 44 LDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQ 123 (480)
Q Consensus 44 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 123 (480)
..+|+.+.+.+++++.++++......+.+|.|+++..+++.+. + .+.+...+..+...+...+...+++.++++++++
T Consensus 3 ~~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-v-~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 3 RNMQEKGVSEKEILEELKKYRSLDLKYEDGNIFGSMCSNVLPI-T-RKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp CSCCSSCCCHHHHHHHHHHHHTTSCCGGGTCBCSCSCCCCCTH-H-HHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEecCCCcHH-H-HHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 3589999999999999999888777888999999997776554 3 3556666655444455566778999999999999
Q ss_pred HhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC
Q psy12303 124 IIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR 203 (480)
Q Consensus 124 ~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~ 203 (480)
++|+++.++++|+|||+|+..++.+++..... .+..|....+|+ .|+++..+|+++..++..+|. +++.+|.+++
T Consensus 81 ~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~-~~~~~~~~~~gd-~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~ 155 (397)
T 3f9t_A 81 LLNNKDAYGHIVSGGTEANLMALRCIKNIWRE-KRRKGLSKNEHP-KIIVPITAHFSFEKGREMMDL---EYIYAPIKED 155 (397)
T ss_dssp HTTCTTCEEEEESCHHHHHHHHHHHHHHHHHH-HHHTTCCCCSSC-EEEEETTCCTHHHHHHHHHTC---EEEEECBCTT
T ss_pred HhCCCCCCEEEecCcHHHHHHHHHHHHHHHHh-hhhhcccCCCCe-EEEECCcchhHHHHHHHHcCc---eeEEEeeCCC
Confidence 99998888999999999999999998764110 111222222445 899999999999999999998 8899999989
Q ss_pred CCCCHHHHHHHHHH-HHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc-------C
Q psy12303 204 GRLIPSELERLVLE-RKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR-------H 275 (480)
Q Consensus 204 ~~~d~~~L~~~i~~-~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~-------~ 275 (480)
+.+|+++|++++++ . +++|++++++|++|.+.|+++|.++|++||+++|+|++|+++.+...... .
T Consensus 156 ~~~d~~~l~~~i~~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 229 (397)
T 3f9t_A 156 YTIDEKFVKDAVEDYD------VDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNY 229 (397)
T ss_dssp SSBCHHHHHHHHHHSC------CCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCC
T ss_pred CcCCHHHHHHHHhhcC------CeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccc
Confidence 99999999999987 4 88999999999999999999999999999999999999998765332110 0
Q ss_pred cccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHH
Q psy12303 276 PRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWL 354 (480)
Q Consensus 276 ~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~ 354 (480)
+..... ++|++++++||++++|.++|+++++++........ ..+|+..... .....++. ...+++++
T Consensus 230 ~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~a 297 (397)
T 3f9t_A 230 KFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDV-DAPYLTETRQ----------ATILGTRVGFGGACTYA 297 (397)
T ss_dssp CCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCE-ECTTSSSSEE----------CSSCSSCCSHHHHHHHH
T ss_pred cccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHhhcc-CCccccCCCc----------cccccccccchHHHHHH
Confidence 011112 67999999999998899999999988765543221 1333322110 01112222 25677888
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh
Q psy12303 355 QWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ 434 (480)
Q Consensus 355 ~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~ 434 (480)
++..++..+++++.++..++++++.+.|++ . +++++.++..+.++|.... ..++.+.|.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~ 357 (397)
T 3f9t_A 298 VLRYLGREGQRKIVNECMENTLYLYKKLKE-N-NFKPVIEPILNIVAIEDED------------------YKEVCKKLRD 357 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCCSSSEEEEECTT------------------HHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEcCCCccEEEEEeCC------------------HHHHHHHHHh
Confidence 888888889999999999999999999999 6 8887777777777764321 1356788888
Q ss_pred cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 435 AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+|+.+ .+.. . .+++|++ ++..+|++|+++++++|+++++
T Consensus 358 ~gi~v-~~~~--~-~~~~Ri~-~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 358 RGIYV-SVCN--C-VKALRIV-VMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp TTCBC-EECS--S-SSEEEEE-CCTTCCHHHHHHHHHHHHHHC-
T ss_pred CCeEE-eccC--C-CCEEEEE-EcCCCCHHHHHHHHHHHHHhhC
Confidence 88543 3321 1 4799999 7788899999999999998865
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=1.7e-36 Score=305.17 Aligned_cols=368 Identities=13% Similarity=0.082 Sum_probs=265.9
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHH----HcCc----------CCcchhcCh
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIA----TANT----------NMFTYEIAP 108 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~----~~~~----------~~~~~~~~~ 108 (480)
...+|++|.+.+++.+.+++.... ....|+++..+++.+..++..+... +.+. +. .|..+|
T Consensus 55 ~~~lp~~g~~~~~i~~~~~~~~~~----~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 129 (456)
T 2z67_A 55 HRKIPENGIDDEKIKLFLKFLSMM----DTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGAS 129 (456)
T ss_dssp HCSCCSSCCCHHHHHHHHHHHHTT----BGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhc----cccccccccccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCc
Confidence 357899999999988877765432 1236888877766666555433321 1121 22 344556
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChh-HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGS-ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
...++++++++++++++|+++. +++|+||| .+|..++.+++... +++ .|+++..+|+++.++++.
T Consensus 130 ~~~~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~------------~~~-~vi~~~~~h~s~~~~~~~ 195 (456)
T 2z67_A 130 IMYALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKY------------GSN-VVIYPYASHKSPIKAVSF 195 (456)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHH------------CCC-EEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhc------------CCC-EEEEECCCcHHHHHHHHH
Confidence 7889999999999999999876 99999999 67777887765420 123 677777899999999999
Q ss_pred cCCCCCCeEEeeC---CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 188 CGLGTDNCVEVPS---DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 188 ~g~~~~~v~~v~~---~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.|+ +++.++. ++++.+|+++|+++|+....++ ++++|++++++|++|.++|+++|.++|+++|+|+|||+||+
T Consensus 196 ~G~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~ 271 (456)
T 2z67_A 196 VGM---NMRLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYA 271 (456)
T ss_dssp TTC---EEEEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTT
T ss_pred cCC---CceEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcch
Confidence 988 7777776 6778999999999994321111 48889999999999999999999999999999999999998
Q ss_pred cccc-ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 265 GGLL-LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 265 ~~~~-~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
.... ..+.... .+.+ ++|++++|+|||+++|.++|++++++++.+.... +.|.... .
T Consensus 272 ~~~~g~~~~~~~-~~~~--~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~---~~~~g~~---------~------- 329 (456)
T 2z67_A 272 IQNNYYLEKLKK-AFKY--RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEIS---LSYPGRA---------S------- 329 (456)
T ss_dssp TTCHHHHHHHHH-HHTS--CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---TTSCSCB---------C-------
T ss_pred HHHHHhhHHHHH-hhCC--CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcC---cCCCCCC---------C-------
Confidence 7665 2222211 2232 6899999999999999999999998776655431 2222100 0
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCceeEEEEEeecCccCCCchhhHHHH
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
...++++|+++..++.++++++.++..++++++.+.|++ .+ |+.++ +|. +.++|.+.....
T Consensus 330 --~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~v~-~~~-~~v~~~~~~~~~----------- 393 (456)
T 2z67_A 330 --ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLND-LSKKTGGKFL-DVE-SPIASCISVNSD----------- 393 (456)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHSSCCBC-CCC-CSSEEEEECSSC-----------
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccCCEec-CCC-CeEEEEEecccH-----------
Confidence 012678999999899999999999999999999999999 75 87665 444 777776521110
Q ss_pred hhhhhHHHHHHHHhcccEEEeee--------e---eCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQ--------P---LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~--------~---~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.++|.++|...+... . ... .+++|++ .+..+|++||++++++|++++
T Consensus 394 ----~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~-~~~vr~s-~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 394 ----PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYT-HDYIVMN-AAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp ----HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCS-CCEEEEE-CCTTCCHHHHHHHHHHHHTC-
T ss_pred ----HHHHHHHHHHcCCCcceEEeecCccccccccccC-cchhhhh-hhcCCCHHHHHHHHHHHHHHh
Confidence 1245566767763111110 0 011 3689999 888999999999999998864
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=1.5e-35 Score=289.78 Aligned_cols=377 Identities=14% Similarity=0.111 Sum_probs=261.0
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccC-CccCC-----------------CCCccccccCCCChHHhHHHHHHHHcCcCCcch
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKY-QVRTG-----------------HPMFMNQLSCGLDVVSMAGEWLIATANTNMFTY 104 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~-----------------~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (480)
...+|++|.+.++|...++++-.- ..++. .|+||+++.+. ++.++++.. +. .|
T Consensus 20 ~~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~ 90 (450)
T 3bc8_A 20 QGKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KA 90 (450)
T ss_dssp HCCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SB
T ss_pred hccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-cc
Confidence 367999999999999998775321 11221 27899988776 455566666 44 67
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCC-eEECCChh-HHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGD-SILAPGGS-ISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~-~~~t~ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
..+|+...+|+.+..|+.+++|+|... +++++|+| .++.+++.++|.... +++ .|+++..+|.|+.
T Consensus 91 ~~~~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~-----------~~~-~viv~r~aHkSv~ 158 (450)
T 3bc8_A 91 AGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRP-----------KAK-YIIWPRIDQKSCF 158 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCT-----------TCC-EEEEECCCCHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhc-----------CCC-EEEEECCcHHHHH
Confidence 888999999999999999999998754 48999998 778878877776311 124 6777788999999
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
+++.++|+++..+..++.++.+.||+++|+++|+++.. ..+.+|+.+.+++..|.++||++|+++|++||+|+|||+|
T Consensus 159 kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A 236 (450)
T 3bc8_A 159 KSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNA 236 (450)
T ss_dssp HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECC
Confidence 99999999543333333366789999999999988631 1367777777766678999999999999999999999999
Q ss_pred ccccccccccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 263 WGGGLLLSKKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
||+...+..... ..++ +++|+++.|+|||+++|.+++++++++++.+..... .|....
T Consensus 237 ~G~~~~~~~~l~---~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~~-------------- 296 (450)
T 3bc8_A 237 YGLQSSKCMHLI---QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGRA-------------- 296 (450)
T ss_dssp TTTTCHHHHHHH---HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSCB--------------
T ss_pred CchhhhhhHhHH---HHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---HhhcCC--------------
Confidence 998765433211 1122 489999999999999999999999998877655422 222100
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCcee-EEEEEeecCccCCCchhh
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMV-NVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~-~v~f~~~~~~~~~~~~~~ 416 (480)
.+ ..++.+|+++..+|.+++.+.+++..++++++++.|++ ++ +++++..+... ..++... .+......+
T Consensus 297 --s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~g~~~l~~~~~~~~~~~~l~--~~~~~~~~D 369 (450)
T 3bc8_A 297 --SA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKK-LAEAHNERLLQTPHNPISLAMTLK--TIDGHHDKA 369 (450)
T ss_dssp --CS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCBCCCTTCSSEEEEECT--TTSSSSSCH
T ss_pred --cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHhcCceecCCccCCCcceeecc--cccccccCC
Confidence 00 13589999999999999999999999999999999998 88 88887654322 1222110 000000000
Q ss_pred HHHHhhhhhHHHHHHHHh---cccEEE----------eeeee------CCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 417 RLNILGEITPILKGRMMQ---AGTMMV----------GYQPL------NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~---~g~~~~----------~~~~~------~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
. .++.-.+.. +|.-+. ..-.. .....++-+. ++...+++|+++++++|+++.
T Consensus 370 ----~----tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~-~sig~~~~di~~l~~~L~~~~ 440 (450)
T 3bc8_A 370 ----V----TQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAA-AAIGMKMQDVDLFIKRLDKCL 440 (450)
T ss_dssp ----H----HHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEE-CCTTCCHHHHHHHHHHHHHHH
T ss_pred ----C----ceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEE-ecCCCCHHHHHHHHHHHHHHH
Confidence 0 122222222 232222 10000 0114566666 889999999999999999875
Q ss_pred c
Q psy12303 478 H 478 (480)
Q Consensus 478 ~ 478 (480)
+
T Consensus 441 ~ 441 (450)
T 3bc8_A 441 N 441 (450)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=7.9e-32 Score=272.51 Aligned_cols=394 Identities=16% Similarity=0.137 Sum_probs=266.5
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCcc-CCCCCccccccCCCChHHhHHHHHHHHcCcCCcchh-cChhhHH
Q psy12303 35 PAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVR-TGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYE-IAPVFIL 112 (480)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 112 (480)
|++++...+..+| +.+..++++.++++...+.. ..+..|++ ...+...+.++.++...+.+.+.+... .+++..+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 3444433356678 78899999999888765543 33456666 323333345554555443333333333 4788889
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
++.++++++++++|++. .+++++|||+|+..++++++... ...|.. +++.+|+++..+|+++..++...|+
T Consensus 108 l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~~~~~----~~~Gd~--~~r~~Vlv~~~~h~~~~~~~~~~G~-- 178 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILIIRAYH----EDRGEG--RTRRVVLVPDSAHGSNPATASMAGY-- 178 (474)
T ss_dssp HHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHHHHH----HHTTCT--TTCCEEEEETTSCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHHHHHH----HhcCCc--cCCCEEEEeCCcChhhHHHHHHCCC--
Confidence 99999999999999976 46688999999999998886421 112320 1123788899999999999999998
Q ss_pred CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeecccccccc-cc
Q psy12303 193 DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLL-LS 270 (480)
Q Consensus 193 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~ 270 (480)
+++.||+++++.+|+++|+++++++ +++|+++++ |++|.+ +|+++|.++|++||+++|+|++|+.+.. ..
T Consensus 179 -~vv~v~~~~~~~~d~~~L~~~i~~~------t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~ 250 (474)
T 1wyu_B 179 -QVREIPSGPEGEVDLEALKRELGPH------VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWA 250 (474)
T ss_dssp -EEEEECBCTTSSBCHHHHHHHCSTT------EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTC
T ss_pred -EEEEecCCCCCCcCHHHHHHhhCCC------ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCC
Confidence 8899999888999999999999764 899999998 579999 7999999999999999999999987653 22
Q ss_pred ccccCcccCCCCCCccceeCccccCCCcc-----cceEEEEeCchhhHhhhcCCcccccccccccCcc----cCCCCccc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLL-----QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR----YDTGDKVI 341 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~ 341 (480)
+.... ++|++++|+||++++|. ++|++++++. ...... ..+.......+... ...+....
T Consensus 251 ~~~~~-------g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~~l~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 319 (474)
T 1wyu_B 251 RPGDM-------GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LAPYLP---VPLVERGEEGFYLDFDRPKSIGRVRS 319 (474)
T ss_dssp CHHHH-------TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GGGGCC---SCEEEECSSCEEEECCCTTCCCCSSS
T ss_pred CcccC-------CCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HHHhCC---CCeeeccCCeeEecccCcccCccccc
Confidence 11122 68999999999999885 6899998764 333221 01110000000000 00000000
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHH
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
.++......++|..+..+|.+++++..++..++++++.+.|++ . |+++..++ ....+++.+ +.. .+
T Consensus 320 ~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~-~~~---~~------- 386 (474)
T 1wyu_B 320 FYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-K-GYRVPYDGPSMHEFVAQP-PEG---FR------- 386 (474)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCSSCSSCCSCEEEBC-STT---CC-------
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c-CcEecCCCCcceEEEEEc-CCC---CC-------
Confidence 0111123456667777778899999999999999999999999 6 88874332 222133322 111 10
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.++|.++|+.. ....+. ...+++|++ ++..+|++++++++++|+++++
T Consensus 387 ----~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis-~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 387 ----ALDLAKGLLELGFHP-PTVYFPLIVKEALMVE-PTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp ----HHHHHHHHHHTTCCC-CEESCSTTSTTCEEEC-CCTTSCHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHCCccc-cccccccccCCEEEEE-eecCCCHHHHHHHHHHHHHHHH
Confidence 245777888888653 211121 114789999 7778899999999999998765
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=2.9e-31 Score=263.98 Aligned_cols=356 Identities=13% Similarity=0.089 Sum_probs=245.8
Q ss_pred CCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCC-eEECCChhHHHHHHHHH
Q psy12303 70 TGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGD-SILAPGGSISNLYAFLA 148 (480)
Q Consensus 70 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~-~~~t~ggt~a~~~al~~ 148 (480)
..+|.++.+.+++..++..+.+.+.. ..... .++....+..++++++++++|.+... +++++|||+|+..++.+
T Consensus 9 ~~~~~~~~~~pgp~~~~~~v~~a~~~---~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~ 83 (411)
T 3nnk_A 9 LNPPSRLLMGPGPINADPRVLRAMSS---QLIGQ--YDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVS 83 (411)
T ss_dssp CCCCCCEEESSSCCCCCHHHHHHHTS---CCCCT--TCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHH
T ss_pred cCCccceeecCCCCCCCHHHHHHhhc---ccccc--ccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHH
Confidence 45677777777776655444344432 21111 24555677888999999999997655 78889999999999988
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.. ||+ .|+++..+|++ +...+...|. +++.+|.+.++.+|+++|++++++. +++
T Consensus 84 ~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~ 140 (411)
T 3nnk_A 84 AIR--------------PGD-KVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPWGEVFTPDQVEDAVKRI-----RPR 140 (411)
T ss_dssp HCC--------------TTC-EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHH-----CCS
T ss_pred hcC--------------CCC-EEEEecCCchHHHHHHHHHHcCC---eEEEEecCCCCCCCHHHHHHHHhhC-----CCe
Confidence 743 445 78888889988 7888888888 8899999888999999999999863 288
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|++++++|++|.+.|+++|.++|++||+++|+|++++.+....+.... ++|++++++||++++|.++|++++
T Consensus 141 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~-------~~d~~~~s~~K~l~~~~g~g~~~~ 213 (411)
T 3nnk_A 141 LLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVW-------GLDAVSAGMQKCLGGPSGTSPITL 213 (411)
T ss_dssp EEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTT-------TCSEEECCSTTTTCCCSSEEEEEE
T ss_pred EEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhcc-------CCcEEEecCccccCCCCceEEEEE
Confidence 9999999999999999999999999999999999999887665544333 789999999999888899999987
Q ss_pred eCchhhHhhhcC---Ccccccccccc------cCcccCCC-------Ccccc-CCCC-CCchHHHHHHHHhcHHHHHHHH
Q psy12303 307 KQDGLLISCNQM---SAEYLFMQDKL------YDVRYDTG-------DKVIQ-CGRH-NDIFKLWLQWRAKGDEGFEKQI 368 (480)
Q Consensus 307 ~~~~~~~~~~~~---~~~~l~~~~~~------~~~~~~~~-------~~~~~-~~r~-~~~l~~~~~l~~~g~~~~~~~~ 368 (480)
++. ........ .+.|....... ....++.. ..... .+.. ....++..++..+..++++++.
T Consensus 214 ~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (411)
T 3nnk_A 214 SAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGI 292 (411)
T ss_dssp CHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred CHH-HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 654 43333221 12222111000 00000000 00000 1111 1233444556655556688999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeee
Q psy12303 369 DRLMELAEYMVKKIKSMPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQP 444 (480)
Q Consensus 369 ~~~~~l~~~l~~~l~~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~ 444 (480)
++..++++++.+.|++ . +++++.++. ...++|.+ |.... ..++.+.|.++ |+. +.++.
T Consensus 293 ~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~l~~~l~~~~gi~-v~~g~ 354 (411)
T 3nnk_A 293 ARHKLHGDALVKGIQA-M-GLETFGDLKHKMNNVLGVVI-PQGIN--------------GDQARKLMLEDFGIE-IGTSF 354 (411)
T ss_dssp HHHHHHHHHHHHHHHH-T-TCCBCSCGGGBCSSEEEEEC-CTTCC--------------HHHHHHHHHHHHSEE-EEECC
T ss_pred HHHHHHHHHHHHHHHH-c-CCEeCCCcccccccEEEEEC-CCCCC--------------HHHHHHHHHHhcCeE-EeCcc
Confidence 9999999999999999 4 888764432 33444433 22211 23566777776 744 43322
Q ss_pred eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 445 LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 445 ~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.....+++|+++.++.++++||++++++|++++++
T Consensus 355 ~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 355 GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 11115799999447778999999999999998754
No 17
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=3.2e-31 Score=260.66 Aligned_cols=344 Identities=17% Similarity=0.176 Sum_probs=240.4
Q ss_pred CccccccCCCChHHhHHHHHHHHcC--cCC-cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATAN--TNM-FTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
.|+++..+++.++.+...+.....+ .+. ..+..+.....+.+++++++++++|++++++++|+|+|+|+..++.++.
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhh
Confidence 4778777777777666433333211 111 1233344556778889999999999987789999999999999999886
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc---CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEE
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC---GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFF 227 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~ 227 (480)
... .. ||+ .|+++..+|+++..++..+ |. +++.+|+++++.+|+++|+++++++ +++
T Consensus 82 ~~~----~~------~gd-~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~------~~~ 141 (382)
T 4hvk_A 82 MRN----AR------KGK-HILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKYGEVDVSFIDQKLRDD------TIL 141 (382)
T ss_dssp HHH----GG------GCC-EEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCTTSCBCHHHHHHHCCTT------EEE
T ss_pred hhh----cC------CCC-EEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCCCCCcCHHHHHHHhccC------ceE
Confidence 310 00 445 8889999999998887765 55 8899999989999999999999765 899
Q ss_pred EEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEe
Q psy12303 228 VNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 228 v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
|++++++|++|.+.|+++|.++|++||+ +|+|++|+.+....+.... ++|+++.|+||+++ |.|+|+++++
T Consensus 142 v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~-------~~d~~~~s~~K~~g-~~g~g~~~~~ 212 (382)
T 4hvk_A 142 VSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKI-------GADMLTISSNDIYG-PKGVGALWIR 212 (382)
T ss_dssp EECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHH-------TCSEEEEESGGGTS-CTTCEEEEEE
T ss_pred EEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhc-------CCCEEEEeHHHhcC-CCceEEEEEc
Confidence 9999999999999999999999999999 9999999887665544333 68999999999755 6789999988
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
+...+ ..++...... .....+... .....++..++.. ..+++++..++..++++++.+.|++ ++
T Consensus 213 ~~~~~-------~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~ 276 (382)
T 4hvk_A 213 KEAKL-------QPVILGGGQE--NGLRSGSEN-----VPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLK-IE 276 (382)
T ss_dssp TTCCC-------CCSSCSSCTG--GGTSCSCCC-----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT-ST
T ss_pred CccCc-------CcccccCCCc--CccccCCcC-----HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 75411 1111111000 000011000 0122233333332 3467889999999999999999999 89
Q ss_pred CeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-------------Cc---
Q psy12303 388 KFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-------------DL--- 448 (480)
Q Consensus 388 g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-------------~~--- 448 (480)
++++..++. .+.++|... ... ..++.+.|.+.|+.+....... +.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~ 340 (382)
T 4hvk_A 277 ESYLNGHPEKRLPNNVNVRFS--YIE--------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHE 340 (382)
T ss_dssp TEEECSCSSSBCTTEEEEEET--TCC--------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHH
T ss_pred CeEEeCCccccCCCEEEEEEC--CCC--------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChh
Confidence 999875442 234555432 111 2356677777775432211000 00
Q ss_pred --ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 449 --PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 449 --~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+++|++ ++..+|++|++++++.|++++++
T Consensus 341 ~~~~~iRl~-~~~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 341 EAHGTLLLT-LGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHTEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEE-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 3699999 77889999999999999987653
No 18
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=7.7e-31 Score=265.13 Aligned_cols=360 Identities=12% Similarity=0.055 Sum_probs=248.9
Q ss_pred CccccccCCCChHHh---HHHHHHHHcCcCCcchhc-ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSM---AGEWLIATANTNMFTYEI-APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
.|++..+.++.+..+ +.+.+..+.+.+...|.. .+....+.+++++++++++|++++++++|+|+|+++..++.++
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~ 148 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSF 148 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHH
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHh
Confidence 477776666555544 334454444433333322 2233455667899999999998889999999999999888877
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcCCCCCC--eEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCGLGTDN--CVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g~~~~~--v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
... |. +++ +|+++..+|++... .++..|+.... +..+|.+.++.+|+++|+++|++.. .
T Consensus 149 ~~~--------~~---~~~-~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~---~ 213 (465)
T 3e9k_A 149 FKP--------TP---KRY-KILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG---D 213 (465)
T ss_dssp CCC--------CS---SSC-EEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG---G
T ss_pred ccc--------cC---CCC-EEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC---C
Confidence 431 11 223 79999999988444 56667873211 3455777789999999999998541 1
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-Ccccce
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCS 302 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g 302 (480)
++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..+.+...+ ++|++++++||+++ +|.++|
T Consensus 214 ~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~-------~~D~~~~s~~K~l~~gp~~~g 286 (465)
T 3e9k_A 214 SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW-------GVDFACWCSYKYLNAGAGGIA 286 (465)
T ss_dssp GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-------TCCEEEECSSSTTCCCTTCCC
T ss_pred CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc-------CCCEEEECcccccccCCCceE
Confidence 3899999999999999999999999999999999999999998877665555 88999999999994 677889
Q ss_pred EEEEeCchhhHhhhcCCcccccccc-ccc----CcccCCCCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQD-KLY----DVRYDTGDKVIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~----~~~~~~~~~~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
+++++++ ..........+|..+.. ..+ ...+..+...++.+.. ....++.+++..+...+++++.++..+++
T Consensus 287 ~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~ 365 (465)
T 3e9k_A 287 GAFIHEK-HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLT 365 (465)
T ss_dssp EEEECGG-GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEEcHH-HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 9998654 33332222222222210 000 0011111112222222 23556667777766667899999999999
Q ss_pred HHHHHHHhcCC----------CCeEEecCCc----eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEe
Q psy12303 376 EYMVKKIKSMP----------DKFYLILEPE----MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVG 441 (480)
Q Consensus 376 ~~l~~~l~~~~----------~g~~~~~~~~----~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~ 441 (480)
+++.+.|++ . ++++++.+.. .+.++|.+. .. ..++.+.|.++|+++ .
T Consensus 366 ~~l~~~L~~-~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~-~~----------------~~~l~~~L~~~Gi~v-~ 426 (465)
T 3e9k_A 366 GYLEYLIKH-NYGKDKAATKKPVVNIITPSHVEERGCQLTITFS-VP----------------NKDVFQELEKRGVVC-D 426 (465)
T ss_dssp HHHHHHHHH-HCC---------CEEECSCSSGGGBCSCEEEEEC-CT----------------TCCHHHHHHTTTEEC-E
T ss_pred HHHHHHHHh-hccccccccCCCCeEEeCCCCHhhcccEEEEEec-CC----------------HHHHHHHHHHCCEEE-e
Confidence 999999988 6 7899876442 566777543 11 124667888888543 3
Q ss_pred eeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 442 YQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 442 ~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. .+ ++++|+++.+.++|++||+++++.|++++++
T Consensus 427 ~---~~-~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 427 K---RN-PNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp E---ET-TTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred c---CC-CCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 2 22 5799999448999999999999999998764
No 19
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.98 E-value=1.7e-30 Score=260.45 Aligned_cols=375 Identities=14% Similarity=0.101 Sum_probs=245.6
Q ss_pred CHHHHHHhcCCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCC---ChHHhHHHHH--HHHc-CcCCcchhcC
Q psy12303 34 HPAEMKAMLDLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGL---DVVSMAGEWL--IATA-NTNMFTYEIA 107 (480)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~l--~~~~-~~~~~~~~~~ 107 (480)
-|++++.. +.++| +|.+..++++.+..+...+.. +|.++...+. ..+..+.+.+ ..++ ..+.+..+.+
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~ 103 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVS 103 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGC
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhh
Confidence 46677766 78899 889999999998776543321 2333332222 2233334444 2332 2222223457
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH-
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA- 186 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~- 186 (480)
++..++..++++++++++|.++.++++++|+|.++..++.+++.. +|+ +|+++..+|+++..++.
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~-------------~gd-~Viv~~~~h~s~~~~~~~ 169 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET-------------GRM-GVLVSQGVHPEYRAVLRA 169 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH-------------TCC-EEEEETTSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcC-------------CCC-EEEEcCccCHhHHHHHHH
Confidence 788889999999999999998778899999995544444443321 445 78899999999886664
Q ss_pred ---HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc-
Q psy12303 187 ---VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA- 262 (480)
Q Consensus 187 ---~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a- 262 (480)
..|+ +++.+|. +++.+|+++ +++ +|++|+++++ |++|.+.|+++|.++|+++|+|+|+|..
T Consensus 170 ~a~~~G~---~v~~v~~-~~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~ 234 (438)
T 1wyu_A 170 YLEAVGA---KLLTLPL-EGGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADP 234 (438)
T ss_dssp HHHHTTC---EEEEECC-BTTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHCCC---EEEEEcC-cCCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEech
Confidence 4677 8888887 567888766 433 3899999999 9999999999999999999999997754
Q ss_pred ccccccccccccCcccCCCCCCccceeCccc-----cCCCcccceEEEEeCchhhHhhhcCCcccccccccccC----c-
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHK-----LMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD----V- 332 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK-----~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~- 332 (480)
++.+.+..+ ..+ ++|++++|+|| |+++| ++|++++++. ..... +.++.+...... .
T Consensus 235 ~a~g~~~~~-~~~-------g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~~l----~~~~~g~~~~~~~~~~~~ 300 (438)
T 1wyu_A 235 LSLGVLKPP-GAY-------GADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVRQL----PGRLVSETVDVEGRRGFI 300 (438)
T ss_dssp TGGGTBCCH-HHH-------TCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGGGC----CSCCEEEEEBTTSCEEEE
T ss_pred hhccCcCCC-ccC-------CCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHHhC----CCceeccccccCCCccee
Confidence 433333222 223 78999999888 66777 8999987654 33332 122111000000 0
Q ss_pred ----------ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEE
Q psy12303 333 ----------RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVS 401 (480)
Q Consensus 333 ----------~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~ 401 (480)
+...+.+++.......++.++..+..++.++++++.++..++++++.+.|++ ++|++++.+ +....++
T Consensus 301 ~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~ 379 (438)
T 1wyu_A 301 LTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLE-VPGVRPFTPKPFFNEFA 379 (438)
T ss_dssp ECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STTCEECSCSSBCSEEE
T ss_pred eeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEECCCCCeEEEEE
Confidence 0011111110000011222333367778889999999999999999999999 889998754 2333344
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEE-EeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMM-VGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~-~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+.. + .. ..++.++|.++|+.+ +..+...+ .+++|++ .+..+|++||++++++|++++
T Consensus 380 ~~~-~--~~--------------~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis-~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 380 LAL-P--KD--------------PEAVRRALAERGFHGATPVPREYG-ENLALFA-ATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EEC-S--SC--------------HHHHHHHHHHTTCCCCEECCTTSC-SSEEEEE-CCTTCCHHHHHHHHHHHHHHC
T ss_pred EeC-C--CC--------------HHHHHHHHHHCCceeccccccccC-CCeEEEE-ecccCCHHHHHHHHHHHHHHh
Confidence 432 1 00 245778888888544 12222223 5799999 778999999999999998875
No 20
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.98 E-value=5.1e-31 Score=262.61 Aligned_cols=356 Identities=12% Similarity=0.107 Sum_probs=239.2
Q ss_pred CCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeE-ECCChhHHHHHHHHH
Q psy12303 70 TGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSI-LAPGGSISNLYAFLA 148 (480)
Q Consensus 70 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~-~t~ggt~a~~~al~~ 148 (480)
...|.++.+.+++...+..+.+.+. +..... ..+...++..++++++++++|.++..++ +++|||+|+..++.+
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~---~~~~~~--~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~ 81 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMS---TPVVGQ--FDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLAS 81 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTT---SCCCCT--TSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhc---ccCCCC--ccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHH
Confidence 3456667776766555433333332 222222 2344577888999999999999876565 889999999999887
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.. ||+ .|+++...|++ +..+++..|. +++.+|.+.++.+|+++|++++++. +++
T Consensus 82 l~~--------------~gd-~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~ 138 (416)
T 3isl_A 82 VIE--------------PED-DVLIPIYGRFGYLLTEIAERYGA---NVHMLECEWGTVFDPEDIIREIKKV-----KPK 138 (416)
T ss_dssp HCC--------------TTC-EEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHH-----CCS
T ss_pred hcC--------------CCC-EEEEecCCcccHHHHHHHHhcCC---eeEEEecCCCCCCCHHHHHHHHhhC-----CCc
Confidence 733 556 78888889988 7778888888 8899999999999999999999853 188
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHF 306 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~ 306 (480)
+|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|++++++||++++|.|+|++++
T Consensus 139 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------~~d~~~~s~~K~l~g~~g~g~~~~ 211 (416)
T 3isl_A 139 IVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEW-------KIDAAIGGTQKCLSVPSGMAPITY 211 (416)
T ss_dssp EEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTT-------TCSEEECCSSSTTCCCSSEEEEEE
T ss_pred EEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhc-------CCCEEEecCccccCCCCCeEEEEE
Confidence 9999999999999999999999999999999999999877665544334 789999999999888999999987
Q ss_pred eCchhhHhhhcCC---ccc--------ccccccccCcccCC-------CCccccC-CCC-CCchHHHHHHHHhcHHHHHH
Q psy12303 307 KQDGLLISCNQMS---AEY--------LFMQDKLYDVRYDT-------GDKVIQC-GRH-NDIFKLWLQWRAKGDEGFEK 366 (480)
Q Consensus 307 ~~~~~~~~~~~~~---~~~--------l~~~~~~~~~~~~~-------~~~~~~~-~r~-~~~l~~~~~l~~~g~~~~~~ 366 (480)
+++ ......... .+| ..+........++. ....+.. +.. ....++..++..+...++++
T Consensus 212 ~~~-~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 290 (416)
T 3isl_A 212 NER-VADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLET 290 (416)
T ss_dssp CHH-HHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred CHH-HHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence 654 433332111 011 00000000000000 0000101 111 12334445566555556889
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEee
Q psy12303 367 QIDRLMELAEYMVKKIKSMPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGY 442 (480)
Q Consensus 367 ~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~ 442 (480)
+.++..++++++.+.|++ ++++++.++. ...++|.+ +.... ..++.+.|.++ | +.+.+
T Consensus 291 ~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~l~~~L~~~~g-i~v~~ 352 (416)
T 3isl_A 291 RFERHRHHEAALAAGIKA--MGLRLFGDDSCKMPVVTCVEI-PGGID--------------GESVRDMLLAQFG-IEIAS 352 (416)
T ss_dssp HHHHHHHHHHHHHHHHHH--TTCCBCSCGGGBCTTEEEEEC-CTTCC--------------HHHHHHHHHHHHC-EECBC
T ss_pred HHHHHHHHHHHHHHHHHH--cCCEeccCccccCCcEEEEeC-CCCCC--------------HHHHHHHHHHhCC-EEEec
Confidence 999999999999999999 5888765432 34455543 21111 24567778776 7 44443
Q ss_pred eeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 443 QPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 443 ~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+......+++|+++....+++++|++++++|++++++
T Consensus 353 g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 353 SFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp CCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 2211225799999434444455599999999988754
No 21
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.98 E-value=1.2e-30 Score=256.84 Aligned_cols=345 Identities=16% Similarity=0.155 Sum_probs=237.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcC--cCCc-chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATAN--TNMF-TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
.|+++..+++.++.+...+.....+ .+.. .|..++.......++++++++++|.+++++++|+|||+|+..++.++.
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHH
Confidence 3778777777777666444333322 1111 133344556778889999999999987789999999999999999887
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEe
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNC 230 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~ 230 (480)
... .. ||+ .|+++..+|+++..++..+...+.+++.+|+++++.+|+++|+++++++ +++|++
T Consensus 82 ~~~----~~------~gd-~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~ 144 (382)
T 4eb5_A 82 MRN----AR------KGK-HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSV 144 (382)
T ss_dssp HHH----GG------GCC-EEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEC
T ss_pred hhc----cC------CCC-EEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCC------CeEEEE
Confidence 210 00 445 7889999999998888764221128899999888999999999998754 899999
Q ss_pred ccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch
Q psy12303 231 TSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG 310 (480)
Q Consensus 231 ~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~ 310 (480)
++++|++|.+.|+++|.++|++||++ |+|++|+.+..+.+.... ++|+++.|+||+++ |.|+|++++++..
T Consensus 145 ~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~-------~~di~~~s~sK~~g-~~g~G~~~~~~~~ 215 (382)
T 4eb5_A 145 QHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI-------GADMLTISSNDIYG-PKGVGALWIRKEA 215 (382)
T ss_dssp CSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH-------TCSEEEEETGGGTC-CSSCEEEEEETTC
T ss_pred eccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc-------CCCEEEeehHHhcC-CCceEEEEEcccc
Confidence 99999999999999999999999999 999999965443322122 57999999999854 6789999987652
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
.+ ..++...... .....+ +.. ....++..++..+ .++++++.++..++++++.+.|++ +|++
T Consensus 216 ~l-------~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~ 278 (382)
T 4eb5_A 216 KL-------QPVILGGGQE--NGLRSG------SENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLK-IEES 278 (382)
T ss_dssp CC-------CCSSCSSCTG--GGTSCS------CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTT-STTE
T ss_pred cc-------CceecCCCcc--ccccCC------CccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhh-CCCe
Confidence 11 1111110000 000011 100 1122334444443 346888899999999999999999 8899
Q ss_pred EEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------------CC-----
Q psy12303 390 YLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------------ND----- 447 (480)
Q Consensus 390 ~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------------~~----- 447 (480)
+++.++. .+.++|.+. ... ..++.+.|.+.|+.+ .++.. .+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~l~~~gi~v-~~g~~~~~~~~~~~~~~~~~g~~~~~ 341 (382)
T 4eb5_A 279 YLNGHPEKRLPNNVNVRFS--YIE--------------GESIVLSLDMAGIQA-STGSACSSKTLQPSHVLMACGLKHEE 341 (382)
T ss_dssp EECSCSSSBCTTEEEEEET--TSC--------------HHHHHHHHHHHTCBC-BCCCGGGTSSCCCCHHHHHTTCCHHH
T ss_pred EEeCCcccCCCCEEEEEeC--CcC--------------HHHHHHHHHHCCEEE-eccccccCCCCcccHHHHHcCCChhc
Confidence 9865431 345556442 111 234666777777543 22211 00
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+++|++ ++..+|++|++++++.|++++++
T Consensus 342 ~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 342 AHGTLLLT-LGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HTTEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 14699999 78888999999999999987653
No 22
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.98 E-value=4.6e-30 Score=253.67 Aligned_cols=353 Identities=13% Similarity=0.050 Sum_probs=237.5
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
.++.|+++...++.++.+. +.+...+.. + .++.......++++++++++|.++.++++|+|||+|+..++.++.
T Consensus 7 ~~~~yl~~~~~~~~~~~v~-~a~~~~~~~----~-~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 7 ADPVITLTAGPVNAYPEVL-RGLGRTVLY----D-YDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp SCCSEECSSSCCCCCHHHH-HHTTSCCCC----T-TSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred CCcceeecCCCcCCCHHHH-HHHhccccc----c-ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc
Confidence 3557888776655566554 333333322 1 134445667788999999999987889999999999999998873
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHH--HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
. ||+ .|+++..+|++.. ..+...|. +++.+|+++++.+|+++|++++++. .++++|
T Consensus 81 ~--------------~gd-~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~----~~~~~v 138 (392)
T 2z9v_A 81 S--------------PDD-VVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPYNEAIDPQAVADMLKAH----PEITVV 138 (392)
T ss_dssp C--------------TTC-CEEEEESSHHHHHHHHHHHHHCS---CEEEEECCTTSCCCHHHHHHHHHHC----TTCCEE
T ss_pred C--------------CCC-EEEEecCCcccHHHHHHHHHcCC---ceEEeeCCCCCCCCHHHHHHHHhcC----CCCcEE
Confidence 2 445 6888888888763 33455677 8899999888899999999999641 137899
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|+++.|+||++++|.|+|++++++
T Consensus 139 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~-------~~d~~~~s~sK~~~~~~g~G~l~~~~ 211 (392)
T 2z9v_A 139 SVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC-------KADIYVTGPNKCLGAPPGLTMMGVSE 211 (392)
T ss_dssp EEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG-------TCSEEEECSSSTTCCCSCCEEEEECH
T ss_pred EEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc-------cceEEEecCcccccCCCceeEEEECH
Confidence 99999999999999999999999999999999999876554333222 68999999999999888899998764
Q ss_pred chhhHhhhcCC--cc-cccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 309 DGLLISCNQMS--AE-YLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 309 ~~~~~~~~~~~--~~-~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
+..+...... +. +......... .+.... ....+... ...++..+++.+...+++++.++..++++++.+.|++
T Consensus 212 -~~~~~l~~~~~g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 288 (392)
T 2z9v_A 212 -RAWAKMKANPLAPRASMLSIVDWEN-AWSRDK-PFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTA 288 (392)
T ss_dssp -HHHHHHHTCTTSCCSSTTCSGGGTT-TTSTTS-CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhhhccCCCCceeccHHHHHh-hhcccC-CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 4443332211 11 1111000000 000000 00011111 1223445555554455788899999999999999999
Q ss_pred CCCCeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccC
Q psy12303 385 MPDKFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSA 459 (480)
Q Consensus 385 ~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~ 459 (480)
+ |++++.++ ...++++.+ +.... ..++.+.|.++ |+.+........ .+++|+++..+
T Consensus 289 -~-g~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~l~~~L~~~~gi~v~~g~~~~~-~~~lRi~~~~~ 350 (392)
T 2z9v_A 289 -M-GLSVWAASDSIASPTTTAVRT-PDGVD--------------EKALRQAARARYGVVFSSGRGETL-GKLTRIGHMGP 350 (392)
T ss_dssp -T-TCCBSSSSGGGBCTTEEEEEC-CTTCC--------------HHHHHHHHHHHHCEECEECCGGGT-TTEEEEECCGG
T ss_pred -c-CCeeccCCccccCCceEEEEC-CCCCC--------------HHHHHHHHHhcCCEEEecCCCCCC-CCeEEEeCccc
Confidence 6 88876523 234455543 21111 23567778777 754433221122 57999993344
Q ss_pred CCCHHHHHHHHHHHHHhhcc
Q psy12303 460 AVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~~~~~ 479 (480)
.++++||++++++|++++++
T Consensus 351 ~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 351 TAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp GCSHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 78999999999999988754
No 23
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=3.5e-30 Score=254.63 Aligned_cols=323 Identities=16% Similarity=0.146 Sum_probs=220.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH--H
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--S 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--~ 183 (480)
.+.......++++++++++|.++. ++++|+|||+|+..++.++.. ||+ .|+++..+|++.. .
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--------------~gd-~vl~~~~~~~~~~~~~ 111 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLE--------------DGD-VILIGHTGHWGDRSAD 111 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCC--------------TTC-EEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhC--------------CCC-EEEEECCCcchHHHHH
Confidence 344567778899999999999764 799999999999999988743 445 7888888888842 3
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.++..|. +++.+|.++++.+|+++|++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|+++
T Consensus 112 ~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~ 183 (393)
T 2huf_A 112 MATRYGA---DVRVVKSKVGQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVA 183 (393)
T ss_dssp HHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTT
T ss_pred HHHHcCC---eeEEEeCCCCCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEccc
Confidence 4455676 7899999888899999999999872 1789999999999999999999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcC---CcccccccccccCcccCC-CCc
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQM---SAEYLFMQDKLYDVRYDT-GDK 339 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~-~~~ 339 (480)
+.+....+.... ++|+++.++||++++|.|+|+++++ ++........ ..+|........ ..+.. ...
T Consensus 184 ~~~~~~~~~~~~-------~~d~~~~s~sK~l~g~~G~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 254 (393)
T 2huf_A 184 SLGGAPMFMDRW-------EIDAMYTGSQKVLGAPPGITPVSFS-HRAVERYKRRNTKVKVYYWDMSLVG-DYWGCFGRP 254 (393)
T ss_dssp TBTTBCCCTTTT-------TCSEEECCSSSTTCCCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHH-HHTTCSSSC
T ss_pred ccCCCCcchhhc-------CccEEEECCCcccccCCCeEEEEEC-HHHHHHHhhcCCCCceEEEchHHHH-hhhcccccc
Confidence 876543332122 6899999999998888889998875 4454444322 123221100000 00000 000
Q ss_pred ccc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--cee-EEEEEeecCccCCCch
Q psy12303 340 VIQ-CGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMV-NVSFWYLPTRVRNMPH 414 (480)
Q Consensus 340 ~~~-~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~-~v~f~~~~~~~~~~~~ 414 (480)
... ++... ...++..+++.+...++++..++..++++++.+.|++ . |++++.++ ..+ .+++.+ +....
T Consensus 255 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~-~~~~~---- 327 (393)
T 2huf_A 255 RIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD-A-GFELYADPKDRLSTVTTIKV-PQGVD---- 327 (393)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCTTEEEEEC-CTTCC----
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCccccCCcEEEEEc-CCCCC----
Confidence 000 11111 2223333555544456788889999999999999999 6 88876433 223 444543 21111
Q ss_pred hhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++ |+ .+.+.......+++|+++..+.++++++++++++|++++++
T Consensus 328 ----------~~~~~~~L~~~~gi-~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 328 ----------WLKAAQYAMKTYLV-EISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp ----------HHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHhCCE-EEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 23566777665 64 44332211115799999335567899999999999987653
No 24
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.6e-30 Score=254.74 Aligned_cols=350 Identities=13% Similarity=0.105 Sum_probs=239.2
Q ss_pred CCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARH 151 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~ 151 (480)
..|+++...+..++.+. +.+..... ..| ++....+.+++++++++++|.+ +.++++|+|||+|+..++.++..
T Consensus 20 ~~~l~~~~~~~~~~~v~-~a~~~~~~---~~~--~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~ 93 (386)
T 2dr1_A 20 KYKLFTAGPVACFPEVL-EIMKVQMF---SHR--SKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVS 93 (386)
T ss_dssp CSEECCSSSCCCCHHHH-HHTTSCCC---CTT--SHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSC
T ss_pred cceeecCCCcCCcHHHH-HHHhcccc---ccc--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhc
Confidence 35777765555555444 33333222 123 3345778889999999999997 55699999999999999988743
Q ss_pred hcCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEE
Q psy12303 152 KMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVN 229 (480)
Q Consensus 152 ~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~ 229 (480)
||+ .|+++..+|++ +..++...|. +++.+|.+.++.+|+++|++++++. .++++|+
T Consensus 94 --------------~gd-~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~----~~~~~v~ 151 (386)
T 2dr1_A 94 --------------KGG-KVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEPGKAVKPEDLDDALRKN----PDVEAVT 151 (386)
T ss_dssp --------------TTC-EEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHC----TTCCEEE
T ss_pred --------------CCC-eEEEEcCCchhHHHHHHHHHhCC---ceEEEecCCCCCCCHHHHHHHHhcC----CCCcEEE
Confidence 445 78888889988 7888888887 8899999888899999999999642 2388999
Q ss_pred eccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 230 CTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 230 ~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
+++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|+++.|+||++++|.|+|++++++
T Consensus 152 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------~~di~~~s~sK~~~~~~g~G~~~~~~- 223 (386)
T 2dr1_A 152 ITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW-------GLDVVFSSSQKAFGVPPGLAIGAFSE- 223 (386)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT-------TCSEEEEETTSTTCCCSSCEEEEECH-
T ss_pred EEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc-------CCcEEEEeccccccCCCceEEEEECH-
Confidence 9999999999999999999999999999999999987654332222 68999999999999887899999864
Q ss_pred hhhHhhhcC-CcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 310 GLLISCNQM-SAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 310 ~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
+........ ...+........ .... +......+.. ....++..+++.+... +++++.++..++++++.+.|++ .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~ 300 (386)
T 2dr1_A 224 RFLEIAEKMPERGWYFDIPLYV-KYLK-EKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-I 300 (386)
T ss_dssp HHHHHHTTCTTCCSTTCHHHHH-HHHH-HHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHhcCCCCceEEeHHHHH-Hhhc-cCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c
Confidence 444333211 011110000000 0000 0000001111 1233444455554344 5788899999999999999999 6
Q ss_pred CCeEEecCC---ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCH
Q psy12303 387 DKFYLILEP---EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTE 463 (480)
Q Consensus 387 ~g~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~ 463 (480)
|++++.++ ....+++.+ +.... ..++.++|.++|+.+........ .+++|++ ++..+++
T Consensus 301 -g~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~l~~~gi~v~~~~~~~~-~~~iRi~-~~~~~~~ 362 (386)
T 2dr1_A 301 -GLDILAEPGHESPTITAVLT-PPGIK--------------GDEVYEAMRKRGFELAKGYGSVK-EKTFRIG-HMGYMKF 362 (386)
T ss_dssp -TCCBSSCTTCBCSSEEEEEC-CTTCC--------------HHHHHHHHHHTTEECEECCGGGT-TTEEEEE-CCSSCCH
T ss_pred -CCeeCcCccccCCceEEEEc-CCCCC--------------HHHHHHHHHHCCeEEecCccccC-CCEEEEE-CCCCCCH
Confidence 88875432 234455543 21111 24577888888744333221112 4799999 7678899
Q ss_pred HHHHHHHHHHHHhhcc
Q psy12303 464 GDIDFLLTEMDRLGHD 479 (480)
Q Consensus 464 ~di~~~~~~l~~~~~~ 479 (480)
+|+++++++|++++++
T Consensus 363 ~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 363 EDIQEMLDNLREVINE 378 (386)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987653
No 25
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=9.6e-30 Score=254.02 Aligned_cols=343 Identities=16% Similarity=0.177 Sum_probs=236.6
Q ss_pred CCccccccCCCChHHhHHHHHHHHcC--cC---Cc--chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATAN--TN---MF--TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYA 145 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~--~~---~~--~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~a 145 (480)
..|+++..+++.++.+. +.+...+. .. .. .+..+........++++++++++|.+++++++|+|||+|+..+
T Consensus 23 ~iyld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a 101 (423)
T 3lvm_A 23 PIYLDYSATTPVDPRVA-EKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLA 101 (423)
T ss_dssp SEECBTTTCCCCCHHHH-HHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred CEeecCCCcCCCCHHHH-HHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHH
Confidence 35788776666666655 44443333 11 10 2223344566778899999999999877899999999999999
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc---CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCC
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC---GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~ 222 (480)
+.++++... .||+ .|+++..+|+++..++..+ |. +++.+|.++++.+|+++|+++++++
T Consensus 102 ~~~l~~~~~----------~~gd-~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~---- 163 (423)
T 3lvm_A 102 IKGAANFYQ----------KKGK-HIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQRNGIIDLKELEAAMRDD---- 163 (423)
T ss_dssp HHHHHHHHT----------TTCC-EEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCTTSCCCHHHHHHHCCTT----
T ss_pred HHHHHHhhc----------cCCC-EEEECCccchHHHHHHHHHHHcCC---EEEEeccCCCCccCHHHHHHhcCCC----
Confidence 998875210 0345 8889999999998888665 66 8899999999999999999999765
Q ss_pred CccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce
Q psy12303 223 DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS 302 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g 302 (480)
+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|++++|+||+++ |.|+|
T Consensus 164 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~-------~~di~~~s~sK~~g-~~g~G 233 (423)
T 3lvm_A 164 --TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL-------KVDLMSFSGHKIYG-PKGIG 233 (423)
T ss_dssp --EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTS-------CCSEEEEESTTTTS-CSSCE
T ss_pred --cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhc-------CCCEEEechHHhcC-CCCeE
Confidence 899999999999999999999999999999999999999987664443333 68999999999655 67799
Q ss_pred EEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKK 381 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~ 381 (480)
+++++++.. ... ..+....... .....+ +.. ....++..++..+ .+.++++.++..++++++.+.
T Consensus 234 ~~~~~~~~~-~~~----~~~~~~~~~~--~~~~~~------~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 299 (423)
T 3lvm_A 234 ALYVRRKPR-VRI----EAQMHGGGHE--RGMRSG------TLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNG 299 (423)
T ss_dssp EEEECBTTB-CCC----CCSSCSSCTT--TTTCCS------CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccc-CCC----CccccCCccc--ccccCC------CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 999875422 111 1111110000 000000 101 1222333444433 234788899999999999999
Q ss_pred HhcCCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-------------
Q psy12303 382 IKSMPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL------------- 445 (480)
Q Consensus 382 l~~~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~------------- 445 (480)
|++ +++++++.++. .+.++|++. . .+ ..++.+.|.+ +.+..+..
T Consensus 300 L~~-~~~~~~~~~~~~~~~~~~~~~~~--~---~~-----------~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~ 359 (423)
T 3lvm_A 300 IKD-IEEVYLNGDLEHGAPNILNVSFN--Y---VE-----------GESLIMALKD---LAVSSGSACTSASLEPSYVLR 359 (423)
T ss_dssp HTT-STTEEEESCSTTBCTTEEEEEET--T---SC-----------HHHHHHHTTT---EECBCCCC-----CCCCHHHH
T ss_pred Hhc-CCCEEEeCCccccCCCeEEEEeC--C---CC-----------HHHHHHHHhh---heeccCccccCCCccccHHHH
Confidence 999 88999876543 245666541 1 11 1234444444 33322110
Q ss_pred -CCc-----ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 446 -NDL-----PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 446 -~~~-----~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+. .+++|++ ++..+|++||+++++.|++++++
T Consensus 360 ~~g~~~~~~~~~iRi~-~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 360 ALGLNDELAHSSIRFS-LGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp HHTCCHHHHHTEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhCCCccccCceEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 000 3799999 77889999999999999987753
No 26
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.97 E-value=3e-30 Score=255.09 Aligned_cols=347 Identities=14% Similarity=0.131 Sum_probs=237.3
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC-CeEECCChhHHHHHHHHHHHHh
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG-DSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~~~~t~ggt~a~~~al~~~~~~ 152 (480)
.|+++......++.+. +.+...... .| ++...++.+++++++++++|.+++ ++++|+|||+|+..++.++..
T Consensus 35 ~~l~~~~~~~~~~~v~-~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~- 107 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVL-QAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVE- 107 (393)
T ss_dssp CEECSSSCCCCCHHHH-HHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCC-
T ss_pred ceeccCCCCCCCHHHH-HHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccC-
Confidence 3555554444555444 444333321 22 233567788899999999999876 799999999999999988843
Q ss_pred cCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEe
Q psy12303 153 MFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNC 230 (480)
Q Consensus 153 ~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~ 230 (480)
||+ .|+++..+|++ +..+++..|. +++.+|.++++.+|+++|++++++. ++++|++
T Consensus 108 -------------~gd-~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~ 165 (393)
T 1vjo_A 108 -------------PGD-VVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPWGEVFSLEELRTALETH-----RPAILAL 165 (393)
T ss_dssp -------------TTC-EEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEE
T ss_pred -------------CCC-EEEEEcCChhHHHHHHHHHHcCC---ceEEEecCCCCCCCHHHHHHHHhhC-----CceEEEE
Confidence 445 78888889998 8888888888 8899999888899999999999873 1789999
Q ss_pred ccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch
Q psy12303 231 TSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG 310 (480)
Q Consensus 231 ~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~ 310 (480)
++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|+++.|+||++++|.++|+++++++
T Consensus 166 ~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-------~~di~~~s~sK~l~~~~~~G~l~~~~~- 237 (393)
T 1vjo_A 166 VHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW-------GVDLAYSCSQKGLGCSPGASPFTMSSR- 237 (393)
T ss_dssp ESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT-------TCSEEECCSSSTTCSCSSCEEEEECHH-
T ss_pred eccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc-------CccEEEEcCcccccCCCceEEEEECHH-
Confidence 999999999999999999999999999999999965433322122 689999999999998888999998654
Q ss_pred hhHhhhcC---CcccccccccccCcccCCCCccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12303 311 LLISCNQM---SAEYLFMQDKLYDVRYDTGDKVIQC-GRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM 385 (480)
Q Consensus 311 ~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~-~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~ 385 (480)
........ ..++....... ......+ .... +.. ....++..+++.+..++++++.++..++++++.+.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 313 (393)
T 1vjo_A 238 AIEKLQRRRTKVANWYLDMNLL-GKYWGSE--RVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLED- 313 (393)
T ss_dssp HHHHHHTCSSCCSCSTTCHHHH-HHHHSTT--CCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHhccCCCCCceecCcHhh-hhhhccC--CCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-
Confidence 44333211 11121110000 0000000 0011 111 12334455555544456788899999999999999999
Q ss_pred CCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccCCC
Q psy12303 386 PDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSAAV 461 (480)
Q Consensus 386 ~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~~~ 461 (480)
. +++++.+.. ...+++.+ +.... ..++.+.|.++ |+.+........ .+++|+++..+.+
T Consensus 314 ~-g~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~ 376 (393)
T 1vjo_A 314 I-GLSLHVEKEYRLPTLTTVCI-PDGVD--------------GKAVARRLLNEHNIEVGGGLGELA-GKVWRVGLMGFNS 376 (393)
T ss_dssp T-TCCBSSCGGGBCSSEEEEEC-CTTCC--------------HHHHHHHHHHHHCEECEECCGGGT-TTEEEEECCGGGC
T ss_pred c-CCcccCCccccCCcEEEEEc-CCCCC--------------HHHHHHHHHhhCCEEEecCccccC-CCEEEEeCCccCC
Confidence 6 888754322 13444443 21111 24567778777 754433222222 5799999545667
Q ss_pred CHHHHHHHHHHHHHhhc
Q psy12303 462 TEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~ 478 (480)
+++++++++++|+++++
T Consensus 377 ~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 377 RKESVDQLIPALEQVLR 393 (393)
T ss_dssp SHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhC
Confidence 88899999999998753
No 27
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=1.5e-30 Score=256.22 Aligned_cols=320 Identities=15% Similarity=0.120 Sum_probs=224.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC--CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh--HH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG--GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VR 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~--~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~ 182 (480)
++....+..++++++++++|+++ +++++|+|||+|+. ++.++.. ||+ .|+++...|++ +.
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~--------------~gd-~vi~~~~~~~~~~~~ 93 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLK--------------PND-KILVVSNGVFGDRWE 93 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCC--------------TTC-EEEEECSSHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcC--------------CCC-EEEEecCCcchHHHH
Confidence 44456788889999999999987 78999999999999 8765532 446 77777788866 44
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+...|. +++.+|.+.++.+|+++|++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++
T Consensus 94 ~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a 165 (384)
T 3zrp_A 94 QIFKRYPV---NVKVLRPSPGDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGV 165 (384)
T ss_dssp HHHTTSSC---EEEEECCSTTCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECT
T ss_pred HHHHHcCC---cEEEecCCCCCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECc
Confidence 55566676 8899999989999999999999872 189999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhh-hcC-Cccccccccccc--CcccCCCC
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISC-NQM-SAEYLFMQDKLY--DVRYDTGD 338 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~-~~~-~~~~l~~~~~~~--~~~~~~~~ 338 (480)
|+.+....+.... ++|++++++||++++|.|+|+++++++ .+... ... ...+........ ...++.+.
T Consensus 166 ~~~~~~~~~~~~~-------~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T 3zrp_A 166 SSVGAEEVKAEEW-------NVDVYLTASQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYYLDLRNWLPVMRGAEEGK 237 (384)
T ss_dssp TTTTTSCCCTTTT-------TCSEEEEETTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTC
T ss_pred ccccCcccccccc-------CCCEEEecCcccccCCCceEEEEECHH-HHHHhcCCCCCCcccccHHHHHHHHHhhcccC
Confidence 9987665444333 689999999999988889999987654 43333 111 111111000000 00000000
Q ss_pred ccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC----ceeEEEEEeecCccCCCc
Q psy12303 339 KVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP----EMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 339 ~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~ 413 (480)
....++.. ....++..++..+...+++++.++..++++++.+.|++ . +++++.++ ....++|.+. . ..
T Consensus 238 ~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~-~-~~--- 310 (384)
T 3zrp_A 238 AAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA-L-GLEIVARRPESYSNTVTGVILK-V-AD--- 310 (384)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSCSSGGGBCSSEEEEECS-S-SC---
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-C-CCeEccCcccccCccEEEEECC-C-CC---
Confidence 00000111 12334445666555666889999999999999999999 6 88876543 2334445432 1 11
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++|+.+. ++.... .+++|++ ++..+|++||++++++|++++++
T Consensus 311 -----------~~~~~~~l~~~gi~v~-~g~~~~-~~~iRi~-~~~~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 311 -----------PQKVLAGTVNEGVEFA-PGVHPA-FKYFRIG-HMGWVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp -----------HHHHHHHHHTTTCCCE-ECCCTT-CCEEEEE-CCSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCEEEe-cCCCCC-cCEEEEe-ccccCCHHHHHHHHHHHHHHHHH
Confidence 2467788888885443 322112 2789999 67779999999999999987753
No 28
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=1e-29 Score=253.45 Aligned_cols=357 Identities=15% Similarity=0.084 Sum_probs=236.4
Q ss_pred CccccccCCCChHHhHHHHHHHHcCc---CCc--chhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANT---NMF--TYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~--~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~ 147 (480)
.|+++...++.++.+. +.+...+.. +.. .+..++.......++++++++++|. ++.++++|+|||+|+..++.
T Consensus 30 i~l~~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 108 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVL-EKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAY 108 (420)
T ss_dssp EECBTTTCCCCCHHHH-HHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred EEecCCccCCCCHHHH-HHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHH
Confidence 4666654455555555 334333221 111 1111222245556788999999999 66789999999999999998
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchh----HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS----VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s----~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+++.... .||+ .|+++..+|++ +...+...|. +++.+|.++++.+|+++|+++++++
T Consensus 109 ~~~~~~~----------~~gd-~Vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~----- 169 (420)
T 1t3i_A 109 SWGMNNL----------KAGD-EIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDEQESFDLEHFKTLLSEK----- 169 (420)
T ss_dssp HTHHHHC----------CTTC-EEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCTTSSBCHHHHHHHCCTT-----
T ss_pred Hhhhccc----------CCCC-EEEECcchhHHHHHHHHHHHHhcCc---EEEEeccCCCCCcCHHHHHHhhCCC-----
Confidence 8842100 1445 78888889988 5667777887 7889999888899999999999754
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|+++.|+||.+ +|.|+|+
T Consensus 170 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------~~di~~~s~sK~~-~~~g~G~ 240 (420)
T 1t3i_A 170 -TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI-------DCDWLVASGHKMC-APTGIGF 240 (420)
T ss_dssp -EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-------TCSEEEEEGGGTT-SCTTCEE
T ss_pred -ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc-------CCCEEEEehhhhc-CCCceEE
Confidence 899999999999999999999999999999999999999987654332223 5899999999965 4677888
Q ss_pred EEEeCchhhHhhhcCCccccccccc-ccCcccCCCCccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEYLFMQDK-LYDVRYDTGDKVIQCGR-HN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVK 380 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~r-~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~ 380 (480)
++++ ++...........+...... .....+......+..+. .. ..+++..+++.+...+++++.++..++++++.+
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 319 (420)
T 1t3i_A 241 LYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQ 319 (420)
T ss_dssp EEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8875 44444432221111000000 00000000011111111 11 122233345555445678888999999999999
Q ss_pred HHhcCCCCeEEecCC-----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee--------eCC
Q psy12303 381 KIKSMPDKFYLILEP-----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP--------LND 447 (480)
Q Consensus 381 ~l~~~~~g~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~--------~~~ 447 (480)
.|++ .++++++.++ ..+.++|.+ +. .. ..++.+.|.+.|+. +.+.. ..+
T Consensus 320 ~L~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~--------------~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~g 381 (420)
T 1t3i_A 320 GLGQ-IPQLRLYGPNPKHGDRAALASFNV-AG-LH--------------ASDVATMVDQDGIA-IRSGHHCTQPLHRLFD 381 (420)
T ss_dssp HHHT-CTTEEEESCCGGGSCBCSEEEEEE-TT-BC--------------HHHHHHHHHTTTEE-CBCSCTTCHHHHHHTT
T ss_pred HHHh-CCCeEEeCCCccccccCCEEEEEE-CC-CC--------------HHHHHHHHHHCCeE-EeeccccchHHHHhcC
Confidence 9999 8899987654 256666653 21 11 23566777788744 33321 112
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+++|++ ++..++++|++++++.|++++++
T Consensus 382 ~~~~iRis-~~~~~~~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 382 ASGSARAS-LYFYNTKEEIDLFLQSLQATIRF 412 (420)
T ss_dssp CCCCEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEe-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 14689999 77888999999999999988754
No 29
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=8e-30 Score=252.98 Aligned_cols=357 Identities=14% Similarity=0.099 Sum_probs=236.6
Q ss_pred CccccccCCCChHHhHHHHHHHHcCc-----CCcchhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANT-----NMFTYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~ 147 (480)
.|+++...++.++.+.. .+...+.. +...+..+........++++++++++|. ++.++++|+|+|+|+..++.
T Consensus 25 i~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 103 (406)
T 1kmj_A 25 AYLDSAASAQKPSQVID-AEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_dssp EECCTTTCCCCCHHHHH-HHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred EEecCCccCCCCHHHHH-HHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHH
Confidence 57777655555555553 33333221 1111111122345566789999999999 56789999999999999998
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHH----HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR----SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+++.... .||+ .|+++..+|++.. ..+...|. +++.+|.++++.+|+++|+++++++
T Consensus 104 ~~~~~~~----------~~gd-~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l~~~l~~~----- 164 (406)
T 1kmj_A 104 SWGNSNV----------RAGD-NIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNPDGTLQLETLPTLFDEK----- 164 (406)
T ss_dssp HTHHHHC----------CTTC-EEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCTTSCBCGGGHHHHCCTT-----
T ss_pred HhhhhcC----------CCCC-EEEEecccchHHHHHHHHHHHhCCC---EEEEEecCCCCCcCHHHHHHHhccC-----
Confidence 8852100 1445 7888888887653 34566777 7889999888899999999998754
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceE
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCST 303 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~ 303 (480)
+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|+++.|+||+++ |.|+|+
T Consensus 165 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~-------~~d~~~~s~~K~~g-~~G~G~ 235 (406)
T 1kmj_A 165 -TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL-------DCDFYVFSGHKLYG-PTGIGI 235 (406)
T ss_dssp -EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-------TCSEEEEEGGGTTS-CTTCEE
T ss_pred -CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc-------CCCEEEEEchhccC-CCCcEE
Confidence 899999999999999999999999999999999999999987654332222 68999999999884 677899
Q ss_pred EEEeCchhhHhhhcCCccccccccc-cc-CcccCCCCccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy12303 304 IHFKQDGLLISCNQMSAEYLFMQDK-LY-DVRYDTGDKVIQCGR-HN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMV 379 (480)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~-~~~~~~~~~~~~~~r-~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~ 379 (480)
++++ ++..........++...... .. ...+......+..+. .. ..+++..+++.+...++++..++..++++++.
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 314 (406)
T 1kmj_A 236 LYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYAL 314 (406)
T ss_dssp EEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9875 44444332211111000000 00 000000001111111 11 11222244555444567788899999999999
Q ss_pred HHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee--------CCccc
Q psy12303 380 KKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL--------NDLPN 450 (480)
Q Consensus 380 ~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~--------~~~~~ 450 (480)
+.|++ +++++++.++ ..+.++|.+ + ... ..++.+.|.+.|+.+ .++.. .+..+
T Consensus 315 ~~L~~-~~~~~~~~~~~~~~~~~~~~-~-~~~--------------~~~~~~~l~~~gi~v-~~g~~~~~~~~~~~g~~~ 376 (406)
T 1kmj_A 315 SQLES-VPDLTLYGPQNRLGVIAFNL-G-KHH--------------AYDVGSFLDNYGIAV-RTGHHCAMPLMAYYNVPA 376 (406)
T ss_dssp HHHTT-STTEEEESCTTCCSEEEEEE-T-TCC--------------HHHHHHHHHHTTEEC-EEECTTCHHHHHHTTCSC
T ss_pred HHHhc-CCCeEEecCCCcCCEEEEEE-C-CCC--------------HHHHHHHHhhCCcEE-EeccccchHHHHhcCCCC
Confidence 99999 8899987542 566777653 2 111 234667777888544 33221 12247
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 451 FFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 451 ~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++|++ ++..+|++|++++++.|+++++.
T Consensus 377 ~iRis-~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 377 MCRAS-LAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp EEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEE-eecCCCHHHHHHHHHHHHHHHHh
Confidence 99999 77888999999999999988754
No 30
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=3.3e-30 Score=250.70 Aligned_cols=317 Identities=14% Similarity=0.098 Sum_probs=219.9
Q ss_pred ChhhHHHHHHHHHHHHHHhCCC--CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH--H
Q psy12303 107 APVFILMETVVLEKMRQIIGWQ--GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV--R 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~--~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~--~ 182 (480)
++.......++++++++++|.+ +.++++|+|||+|+..++.+++. + .|+++...|++. .
T Consensus 28 ~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~----------------d-~vl~~~~~~~~~~~~ 90 (353)
T 2yrr_A 28 DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR----------------G-PVLVLVNGAFSQRVA 90 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC----------------C-CEEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC----------------C-cEEEEcCCCchHHHH
Confidence 4555677888999999999996 56799999999999988866521 2 567777788874 4
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+...|. +++.+|.++++.+|+++|++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++
T Consensus 91 ~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a 162 (353)
T 2yrr_A 91 EMAALHGL---DPEVLDFPPGEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV 162 (353)
T ss_dssp HHHHHTTC---CEEEEECCTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHcCC---ceEEEeCCCCCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence 55677787 8899999888899999999999862 278999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|+.+..+.+.... ++|++++++||++++|.|+|+++++++ .+..... .+.+....... ...... ....
T Consensus 163 ~~~~~~~~~~~~~-------~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~l~~-~~~~~~~~~~~-~~~~~~--~~~~ 230 (353)
T 2yrr_A 163 TTLGMLPFSMRAM-------GVDYAFTGSQKCLSAPPGLAPIAASLE-ARKAFTG-KRGWYLDLARV-AEHWER--GGYH 230 (353)
T ss_dssp TTTTTSCCCHHHH-------TCSEEECCTTSTTCCCSSCEEEEECHH-HHHHCCC-CSCSTTCHHHH-HHHHTT--CCCS
T ss_pred ccccccccccccc-------CceEEEecCcccccCCCceEEEEECHH-HHHHhcc-CCCccccHHHH-hhhhhc--CCCC
Confidence 9866543332222 579999999999988888999987654 3333221 11111000000 000000 0000
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeEEEEEeecCccCCCchhhHHH
Q psy12303 343 CGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 343 ~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
.+... ...++..++..+...+++++.++..++++++.+.|++ . |++++.++ ...+++|.+ +....
T Consensus 231 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~-~~~~~--------- 298 (353)
T 2yrr_A 231 HTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKA-R-GFRPYPKASPLPTVLVVRP-PEGVD--------- 298 (353)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCEESCSSSBCTTEEEEEC-CTTCC---------
T ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-C-CCccccCccCCCeEEEEEC-CCCCC---------
Confidence 11111 2233445565555556888899999999999999999 6 99986543 233344543 21111
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHH-HHHHHHHHhhcc
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDID-FLLTEMDRLGHD 479 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~-~~~~~l~~~~~~ 479 (480)
..++.+.|.++|+.+........ .+++|++ .+..++++|++ +++++|++++++
T Consensus 299 -----~~~~~~~l~~~gi~v~~g~~~~~-~~~iRi~-~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 299 -----ADRLVRALYAEGVAVAGGIGPTR-GQVLRLG-LMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp -----HHHHHHHHHHTTEECEECCGGGT-TTCEEEE-CSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHCCEEEeCCccccC-CCeEEEe-cCccCCHHHHHHHHHHHHHHHHhh
Confidence 24567788888754433221222 5789999 66677889998 999999988764
No 31
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=5.8e-30 Score=252.88 Aligned_cols=353 Identities=10% Similarity=0.095 Sum_probs=236.3
Q ss_pred CCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC-CeEECCChhHHHHHHHHHHH
Q psy12303 72 HPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG-DSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 72 ~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~~~~t~ggt~a~~~al~~~~ 150 (480)
.|.++.+.+++..++..+.+.+.. ..... ..+.......++++++++++|.+.. ++++|+|||+|+..++.++.
T Consensus 21 ~~~~~~~~p~p~~~~~~v~~a~~~---~~~~~--~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~ 95 (393)
T 3kgw_A 21 VPTRLLLGPGPSNLAPRVLAAGSL---RMIGH--MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL 95 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTC---CCCCT--TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC
T ss_pred CccceeccCCCCCCCHHHHHHhcc---cccCc--ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC
Confidence 456677766665554333333322 11111 2344567778899999999999754 48999999999999998874
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV 228 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v 228 (480)
. ||+ .|+++...|++ +...+...|. +++.+|.+.++.+|+++|++++++. ++++|
T Consensus 96 ~--------------~gd-~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v 152 (393)
T 3kgw_A 96 E--------------PGD-SFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKPGEHYTLQEVEEGLAQH-----KPVLL 152 (393)
T ss_dssp C--------------TTC-EEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHHHHHHHHH-----CCSEE
T ss_pred C--------------CCC-EEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCCCCCCHHHHHHHHhhC-----CCcEE
Confidence 3 556 67777677763 3677777787 8899999888899999999999873 18899
Q ss_pred EeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC
Q psy12303 229 NCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ 308 (480)
Q Consensus 229 ~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~ 308 (480)
++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|++++++||++++|.|+|++++++
T Consensus 153 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~-------~~d~~~~s~sK~~~~~~g~g~~~~~~ 225 (393)
T 3kgw_A 153 FLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQ-------GIDIMYSSSQKVLNAPPGISLISFND 225 (393)
T ss_dssp EEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTT-------TCCEEEEESSSTTCCCSSCEEEEECH
T ss_pred EEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhc-------CCCEEEecCcccccCCCceeEEEECH
Confidence 99999999999999999999999999999999999866554433333 68999999999998888999998754
Q ss_pred chhhHhhhcCCcc---cccccccccCcccCCCC--ccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q psy12303 309 DGLLISCNQMSAE---YLFMQDKLYDVRYDTGD--KVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI 382 (480)
Q Consensus 309 ~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~--~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l 382 (480)
+ ........... +...... ....+.... .....+.. ....++..++..+..++++++.++..++++++.+.|
T Consensus 226 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 303 (393)
T 3kgw_A 226 K-AKYKVYSRKTKPVSFYTDITY-LAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHL 303 (393)
T ss_dssp H-HHHHHHTCSSCCSCSTTCHHH-HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHhccCCCCCceeecHHH-HHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 4 44433221111 1000000 000000000 00001111 122344455555556668899999999999999999
Q ss_pred hcCCCCeEEecCCc---eeEE-EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecc
Q psy12303 383 KSMPDKFYLILEPE---MVNV-SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIIS 457 (480)
Q Consensus 383 ~~~~~g~~~~~~~~---~~~v-~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~ 457 (480)
++ . +++++.++. ...+ +|.+ +.... ..++.+.|.++ |+ .+.++......+++|+++.
T Consensus 304 ~~-~-g~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~ 365 (393)
T 3kgw_A 304 QE-M-GLKFFVKDPEIRLPTITTVTV-PAGYN--------------WRDIVSYVLDHFSI-EISGGLGPTEERVLRIGLL 365 (393)
T ss_dssp HH-T-TCCBSSSSGGGBCSSEEEEEC-CTTBC--------------HHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECC
T ss_pred HH-c-CCeeccCChhhcCCeEEEEeC-CCCCC--------------HHHHHHHHHHhCCE-EEeCCcccCCCCEEEEEec
Confidence 99 6 888753221 2233 3432 22211 24567788777 74 4443222222579999943
Q ss_pred cCCCCHHHHHHHHHHHHHhhcc
Q psy12303 458 SAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 458 ~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+..+|++|+++++++|++++++
T Consensus 366 ~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 366 GYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHh
Confidence 6667999999999999998764
No 32
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.97 E-value=5.1e-29 Score=245.31 Aligned_cols=343 Identities=16% Similarity=0.170 Sum_probs=231.7
Q ss_pred CccccccCCCChHHhHHHHHHHHcCc--CCc-chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANT--NMF-TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAAR 150 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~ 150 (480)
.|+++...++.++.+...+.....+. +.. .+..+........++++++++++|.+++++++|+|||+|+..++.+++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVA 82 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhh
Confidence 47777666666666664433333221 111 112223345667788999999999987789999999999999999887
Q ss_pred HhcCchhHhcCCCccCCceEEEecCCCchhHHHHH---HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEE
Q psy12303 151 HKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA---AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFF 227 (480)
Q Consensus 151 ~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~---~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~ 227 (480)
.... .||+ .|+++..+|+++...+ ...|. +++.+|.++++.+|+++|+++++++ +++
T Consensus 83 ~~~~----------~~gd-~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~------~~~ 142 (384)
T 1eg5_A 83 ETFE----------KRKR-TIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDSRGVVKLEELEKLVDED------TFL 142 (384)
T ss_dssp HHTT----------TTCC-EEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCTTSCBCHHHHHHHCCTT------EEE
T ss_pred hhcc----------CCCC-EEEECCCCchHHHHHHHHHHhcCC---EEEEEccCCCCccCHHHHHHHhCCC------CeE
Confidence 3100 0445 7889999999987776 55666 8889999888999999999998754 899
Q ss_pred EEeccCCCccccccChHHHHHHHHHcC--cEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 228 VNCTSGTTVLGAFDPIEEIADICQKYN--MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 228 v~~~~~~~~~G~~~~l~~I~~i~~~~~--~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
|++++++|++|.+.|+++|.++|++|| +++|+|++|+.+....+. ... ++|++++|+||+++ |.|+|+++
T Consensus 143 v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~------~~~-~~di~~~s~sK~~g-~~G~G~~~ 214 (384)
T 1eg5_A 143 VSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSL------EKL-EVDYASFSAHKFHG-PKGVGITY 214 (384)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCC------TTT-CCSEEEEEGGGGTS-CTTCEEEE
T ss_pred EEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCc------hhc-CCCEEEecHHHhcC-CCceEEEE
Confidence 999999999999999999999999999 999999999855432221 122 68999999999865 56689998
Q ss_pred EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
+++.. . .. ..+...... ... ...+.. ....+++.+++.+ .+++++..++..++++++.+.|++
T Consensus 215 ~~~~~---~---~~-~~~~~~~~~--~~~------~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 278 (384)
T 1eg5_A 215 IRKGV---P---IR-PLIHGGGQE--RGL------RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN 278 (384)
T ss_dssp ECTTS---C---CC-CSBCSSCTT--TTT------BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCC---c---cc-cccccCccc--ccc------cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC
Confidence 86542 0 01 111110000 000 000100 1222333444432 356788899999999999999998
Q ss_pred CCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-------------C-
Q psy12303 385 MPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-------------D- 447 (480)
Q Consensus 385 ~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-------------~- 447 (480)
++++++.++. ...+.|.+. ... ..++.+.|.+.|+.+....... +
T Consensus 279 --~g~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~ 340 (384)
T 1eg5_A 279 --LGAHIITPLEISLPNTLSVSFP--NIR--------------GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGV 340 (384)
T ss_dssp --TTCEECSCTTSBCTTEEEEECT--TCC--------------HHHHHHHHHHTTEECBC------------CHHHHTTC
T ss_pred --CCeEEeCCcccCCCCEEEEEeC--CCC--------------HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCC
Confidence 7998865432 234555432 111 2356677777774433211110 1
Q ss_pred ----cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 448 ----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 448 ----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+++|++ ++..+|++|+++++++|++++++
T Consensus 341 ~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 341 DRRIAQGAIRIS-LCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp CHHHHHHEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCeEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 13799999 77788999999999999988764
No 33
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=2.1e-29 Score=248.57 Aligned_cols=315 Identities=14% Similarity=0.146 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AA 186 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~ 186 (480)
.....++++.+++++|.+++++++|+|||+|+..++.+++-. ||+ .|+++..+|+++..+ ++
T Consensus 58 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~-------------~gd-~vl~~~~~~~~~~~~~~~~~~ 123 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWH-------------QGD-EILLTDCEHPGIIAIVQAIAA 123 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCC-------------TTC-EEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCC-------------CCC-EEEEecCcccHHHHHHHHHHH
Confidence 355667889999999998778999999999999998877311 445 788888999987654 46
Q ss_pred HcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHH----HcCcEEEee
Q psy12303 187 VCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQ----KYNMWLHVD 260 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~----~~~~~l~vD 260 (480)
..|. +++.+|.+ +++.+|+++|+++++++ +++|++++++|++|.+.|+++|.++|+ +||+++|+|
T Consensus 124 ~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~D 194 (390)
T 1elu_A 124 RFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVD 194 (390)
T ss_dssp HHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEE
T ss_pred HhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEE
Confidence 6677 78889987 57889999999988754 899999999999999999999999999 999999999
Q ss_pred ccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC--
Q psy12303 261 AAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD-- 338 (480)
Q Consensus 261 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 338 (480)
++|+.+....+.... ++|+++.|+|||+++|.++|++++++. ...........+...........+++..
T Consensus 195 ea~~~g~~~~~~~~~-------~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 266 (390)
T 1elu_A 195 GAQSAGSLPLDFSRL-------EVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGG 266 (390)
T ss_dssp CTTTBTTBCCCTTTS-------CCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGG
T ss_pred cccccCCcCCChhhc-------CCCEEEccccccccCCCceEEEEECHH-hHhhcCCccccCCcccccccCcccccccch
Confidence 999976543332222 689999999998888899999998753 3333221111110000000000000000
Q ss_pred ccccCCC-C-CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--CceeEEEEEeecCccCCCc
Q psy12303 339 KVIQCGR-H-NDIFKLWLQWRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 339 ~~~~~~r-~-~~~l~~~~~l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~~~~v~f~~~~~~~~~~~ 413 (480)
..+..+. . ....++..++..+...+ ++++.++..++++++.+.|++ ++|++++.+ +..+.++|.+ +....
T Consensus 267 ~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~-~~~~~--- 341 (390)
T 1elu_A 267 KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ-LPHVHCLATSAPQAGLVSFTV-DSPLG--- 341 (390)
T ss_dssp GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-STTEEESCSSCCSSSEEEEEE-CSSSC---
T ss_pred HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEecCccccccEEEEEc-CCCCC---
Confidence 0011111 1 12233445555554444 788899999999999999999 889998753 3566666644 22111
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.+.|.+.|+.+ .+.. + .+++|++ ++..++++|+++++++|+++.
T Consensus 342 -----------~~~~~~~l~~~gi~v-~~~~--~-~~~iRis-~~~~~~~~~i~~~~~~l~~~~ 389 (390)
T 1elu_A 342 -----------HRAIVQKLEEQRIYL-RTIA--D-PDCIRAC-CHYITDEEEINHLLARLADFG 389 (390)
T ss_dssp -----------HHHHHHHHHHTTEEC-EEET--T-TTEEEEE-CCTTCCHHHHHHHHHHHTTCC
T ss_pred -----------HHHHHHHHHHCCEEE-EecC--C-CCeEEEe-cccCCCHHHHHHHHHHHHhhC
Confidence 235677787887443 3322 2 4799999 778899999999999998753
No 34
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=5.2e-30 Score=249.40 Aligned_cols=313 Identities=11% Similarity=-0.021 Sum_probs=216.9
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH--HH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--SC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--~~ 184 (480)
++.......++++++++++|.++.++++|+|||+|+..++.++.. ||+ .|+++..+|++.. ..
T Consensus 29 ~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~--------------~gd-~vl~~~~~~~~~~~~~~ 93 (352)
T 1iug_A 29 TEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFA--------------PGE-RVLVPVYGKFSERFYEI 93 (352)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCC--------------TTC-EEEEEECSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccC--------------CCC-eEEEEeCCchhHHHHHH
Confidence 344556677899999999999877899999999999999988743 445 7888888999965 34
Q ss_pred HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeecc
Q psy12303 185 AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAA 262 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a 262 (480)
+...|. +++.+|.++++.+|+++|++ + ++++|++++++|++|.+.|+++|.++|++| |+++|+|++
T Consensus 94 ~~~~g~---~~~~v~~~~~~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a 161 (352)
T 1iug_A 94 ALEAGL---VVERLDYPYGDTPRPEDVAK---E------GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMV 161 (352)
T ss_dssp HHHTTC---EEEEEECCTTCCCCTTTSCC---S------SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECT
T ss_pred HHHcCC---ceEEEeCCCCCCCCHHHHhc---c------CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECC
Confidence 455676 88999998888899998876 2 278999999999999999999999999999 999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|+.+....+.... ++|+++.++|||+++|.|+|+++++++ .+..... ..+........ .....+ ...
T Consensus 162 ~~~~~~~~~~~~~-------~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~--~~~~~~~~~~~-~~~~~~--~~~ 228 (352)
T 1iug_A 162 TSLLVGEVALEAM-------GVDAAASGSQKGLMCPPGLGFVALSPR-ALERLKP--RGYYLDLAREL-KAQKEG--ESA 228 (352)
T ss_dssp TTBTTBCCCSGGG-------TCSEEEEESSSTTCCCSCEEEEEECHH-HHHTCCC--CSSTTCHHHHH-HHHTTT--CCS
T ss_pred ccccCcceecccc-------CeeEEEecCcccccCCCceeEEEECHH-HHHHhhC--CCceeeHHHHH-hhcccC--CCC
Confidence 9876544332222 689999999999998889999997654 3332211 11100000000 000000 000
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHH
Q psy12303 343 CGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 343 ~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
.+... ...++..++..+... ++++.++..++++++.+.|++ . |++++.++ ....++|.+ +....
T Consensus 229 ~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~-~~~~~---------- 294 (352)
T 1iug_A 229 WTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEE-G-GLRPVPKRFSPAVAAFYL-PEGVP---------- 294 (352)
T ss_dssp SCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHH-T-TCEESCSSBCTTCEEEEC-CTTCC----------
T ss_pred CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-C-CCcccccccCCeEEEEEc-CCCCC----------
Confidence 11111 122334445444333 778889999999999999999 6 99886443 344555543 21111
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.++|.++|+.+ .+.......+++|++ ++..++++|+++++++|++++++
T Consensus 295 ----~~~~~~~l~~~gi~v-~~~~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 295 ----YARVKEAFAQRGAVI-AGGQGPLKGKVFRLS-LMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp ----HHHHHHHHHTTTEEC-EECCGGGTTTEEEEC-CCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHCCEEE-EeCCCccCCCEEEEE-ccccCCHHHHHHHHHHHHHHHHH
Confidence 245677888887443 332211115799999 77788999999999999988754
No 35
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.97 E-value=2.3e-29 Score=249.00 Aligned_cols=354 Identities=15% Similarity=0.089 Sum_probs=234.0
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCC-CeEECCChhHHHHHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGG-DSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~~~~t~ggt~a~~~al~~~ 149 (480)
..+.++++.+++..++..+.+.+..... ..| ++.......++++++++++|.+++ ++++|+|||+|+..++.++
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~---~~~--~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~ 89 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTVL---SNF--HAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNL 89 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCCC---CTT--CHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhccccc---cCC--ChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHh
Confidence 3445555555554443333344333222 123 344446667889999999999876 7999999999999999887
Q ss_pred HHhcCchhHhcCCCccCCceEEEecCCCchhHH--HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEE
Q psy12303 150 RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFF 227 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~ 227 (480)
.. ||+ .|+++..+|+++. ..+...|. +++.+|.++++.+|+++|++++++. ++++
T Consensus 90 ~~--------------~gd-~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~ 146 (396)
T 2ch1_A 90 LE--------------EGD-RVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPDRPFSLETLARAIELH-----QPKC 146 (396)
T ss_dssp CC--------------TTC-EEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTSCCCHHHHHHHHHHH-----CCSE
T ss_pred cC--------------CCC-eEEEEcCCcccHHHHHHHHHcCC---ceEEecCCCCCCCCHHHHHHHHHhC-----CCCE
Confidence 43 445 7888888999874 46777787 7899999888899999999999873 1789
Q ss_pred EEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEe
Q psy12303 228 VNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 228 v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|+++.|+||++++|.++|+++++
T Consensus 147 v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-------~~d~~~~s~~K~~~~~~g~g~~~~~ 219 (396)
T 2ch1_A 147 LFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW-------EIDAVYTGAQKVLGAPPGITPISIS 219 (396)
T ss_dssp EEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT-------TCCEEECCCC-CCCCCSSCEEEEEC
T ss_pred EEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc-------CcCEEEEcCCccccCCCCeEEEEEC
Confidence 999999999999999999999999999999999999966543332222 6799999999999988899988876
Q ss_pred CchhhHhhhcC---CcccccccccccCcccCC--CCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q psy12303 308 QDGLLISCNQM---SAEYLFMQDKLYDVRYDT--GDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKK 381 (480)
Q Consensus 308 ~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~--~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~ 381 (480)
+ ..+...... ...+....... ...+.. .......+... ...++..++..+..++++++.++..++++++.+.
T Consensus 220 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (396)
T 2ch1_A 220 P-KALDVIRNRRTKSKVFYWDLLLL-GNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEG 297 (396)
T ss_dssp H-HHHHHHHTCSSCCSCGGGCHHHH-HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHhhhhccCcccceEechHHH-HHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5 444433211 11111110000 000000 00000011111 2234444555544567888899999999999999
Q ss_pred HhcCCCCeEEecCCc---e-eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEec
Q psy12303 382 IKSMPDKFYLILEPE---M-VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNII 456 (480)
Q Consensus 382 l~~~~~g~~~~~~~~---~-~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~ 456 (480)
|++ . |++++.+.. . ..+++.+ +.... ..++.++|.++ |+.+........ .+++|+++
T Consensus 298 L~~-~-g~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~L~~~~gi~v~~g~~~~~-~~~iRi~~ 359 (396)
T 2ch1_A 298 LGK-M-GLDIFVKDPRHRLPTVTGIMI-PKGVD--------------WWKVSQYAMNNFSLEVQGGLGPTF-GKAWRVGI 359 (396)
T ss_dssp HHH-H-TCCBSSCSGGGBCTTEEEEEC-CTTCC--------------HHHHHHHHHHHHCBCCBCCCGGGT-TTEEEEEC
T ss_pred HHH-C-CCeeccCCccccCCceEEEEc-CCCCC--------------HHHHHHHHHHhCCEEEecCccccC-CCEEEEEC
Confidence 999 6 888764332 1 2444543 21111 23566777765 754322111112 57999994
Q ss_pred ccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 457 SSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 457 ~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.++++|+++++++|++++++
T Consensus 360 ~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 360 MGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHH
Confidence 36678999999999999987653
No 36
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=3.3e-29 Score=246.11 Aligned_cols=316 Identities=14% Similarity=0.084 Sum_probs=216.9
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCC-CeE-ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH--
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGG-DSI-LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR-- 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~-~~~-~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~-- 182 (480)
++....+.+++++++++++|++.. +++ +|+|||+|+..++.++.. ||+ .|+++...+++..
T Consensus 47 ~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~--------------~gd-~vi~~~~~~~~~~~~ 111 (376)
T 3f0h_A 47 TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFT--------------KKD-KVLVIDGGSFGHRFV 111 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCC--------------TTC-CEEEEESSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccC--------------CCC-eEEEEeCChhhHHHH
Confidence 455567778899999999999752 445 489999999999987753 456 5555555454433
Q ss_pred HHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 183 SCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
..+...|. +++.++.+.++.+|+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++
T Consensus 112 ~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 112 QLCEIHEI---PYVALKLEHGKKLTKEKLYEYDNQN------FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp HHHHHTTC---CEEEEECCTTCCCCHHHHHTTTTSC------CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHcCC---ceEEEeCCCCCCCCHHHHHHhhccC------ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence 34555666 8899999888999999999876543 88999999999999999999999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcC-CcccccccccccCcccCCCCccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQM-SAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
|+.+....+.... ++|++++++||++++|.|+|++++++ +........ ...+......... ....+ ..
T Consensus 183 ~~~~~~~~~~~~~-------~~d~~~~s~~K~l~~~~G~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~ 251 (376)
T 3f0h_A 183 SAFLADPFNMNEC-------GADVMITGSQKVLACPPGISVIVLAP-RGVERVEKSKVRTMYFDLKDALK-NQERG--QT 251 (376)
T ss_dssp TTTTTSCCCHHHH-------TCSEEEEETTTTTCCCSSCEEEEECH-HHHHHHHTCCCCCSTTCHHHHHH-HHTTT--CC
T ss_pred ccccCcccccccc-------CccEEEecCcccccCCCceEEEEECH-HHHHHhhcCCCCceeecHHHHHh-hcccC--CC
Confidence 9988765444333 68999999999999888899987654 444433321 1121111000000 00000 00
Q ss_pred cCCCCCCc---hHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhH
Q psy12303 342 QCGRHNDI---FKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKR 417 (480)
Q Consensus 342 ~~~r~~~~---l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 417 (480)
..+ ... .++..++..+... +++++.++..++++++.+.|++ . ++++..++....++. +.+....
T Consensus 252 ~~~--~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~-~~~~~~~------- 319 (376)
T 3f0h_A 252 PFT--PAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD-L-PFELVSESPANGVTS-VHPTTAN------- 319 (376)
T ss_dssp SSC--CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-S-SEEECCSSBBTTEEE-EEESSSC-------
T ss_pred CCC--CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-c-CCccCccccCceEEE-EeCCCCC-------
Confidence 011 122 3445555555455 6888999999999999999998 4 788764433332222 2222211
Q ss_pred HHHhhhhhHHHHHHHHhc-ccEEEeeee-eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 418 LNILGEITPILKGRMMQA-GTMMVGYQP-LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~-g~~~~~~~~-~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++ |+. +.++. ..+ .+++|++ ++..+|++|+++++++|++++++
T Consensus 320 -------~~~l~~~l~~~~gi~-v~~g~~~~~-~~~lRis-~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 320 -------AYDIFLKLKDEYGIW-ICPNGGEMK-DTIFRVG-HIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp -------HHHHHHHHHHHSSEE-CEECCGGGT-TTCEEEE-CCSSCCHHHHHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHhCCEE-EecCccccC-CCEEEEe-cCCCCCHHHHHHHHHHHHHHHHh
Confidence 24577888888 644 43321 122 5799999 77789999999999999998753
No 37
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=4.8e-29 Score=243.77 Aligned_cols=320 Identities=13% Similarity=0.131 Sum_probs=218.2
Q ss_pred HHHHHHHHHHHHHhCCCC--CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HHHHHHHc
Q psy12303 112 LMETVVLEKMRQIIGWQG--GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VRSCAAVC 188 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~--~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~~~~~~~ 188 (480)
....++++++++++|.+. .++++|+|||+|+..++.+++. ||+.+++.+..+|++ +..++...
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~ 102 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALG--------------PQDKVLIVSNGAYGARMVEMAGLM 102 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCC--------------TTCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcC--------------CCCeEEEEeCCCccHHHHHHHHHh
Confidence 445667888999999432 3699999999999999988743 445466676678876 56677778
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|. +++.+|.+.++.+|+++|++++++. .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..
T Consensus 103 g~---~~~~v~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~ 175 (366)
T 1m32_A 103 GI---AHHAYDCGEVARPDVQAIDAILNAD----PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI 175 (366)
T ss_dssp TC---CEEEEECCTTSCCCHHHHHHHHHHC----TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred CC---ceEEEeCCCCCCCCHHHHHHHHhcC----CCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCc
Confidence 88 7899999888899999999999863 1277899999999999999999999999999999999999987655
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcc-cCCCCccccCCCC-
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVR-YDTGDKVIQCGRH- 346 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~r~- 346 (480)
..+.... ++|+++.|+||++++|.|+|++++++. ..........++.......+... ...+.. ..+..
T Consensus 176 ~~~~~~~-------~~di~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 245 (366)
T 1m32_A 176 PMDIAAL-------HIDYLISSANKCIQGVPGFAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCMEDNHGKW--RFTSPT 245 (366)
T ss_dssp CCCTTTT-------TCSEEEEESSSTTCCCSSEEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHHHHTTTCC--SSCCCH
T ss_pred Ccccccc-------CccEEEecCcccccCCCceEEEEECHH-HHHhhcCCCCCccccHHHHHhhhcccCCCC--CCCCCH
Confidence 4332222 589999999999988888999998753 33322211111111000000000 000000 00111
Q ss_pred CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC--cee-EEEEEeecCccCCCchhhHHHHhh
Q psy12303 347 NDIFKLWLQWRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLILEP--EMV-NVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
....++..+++.+...+ ++++.++..++++++.+.|++ . +++++.++ ..+ .+++.+ +.. .+.+
T Consensus 246 ~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--------- 312 (366)
T 1m32_A 246 HTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-L-GFNTLLDDELHSPIITAFYS-PED-PQYR--------- 312 (366)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-T-TCCBSSCGGGBCSSEEEEEC-CCC-TTCC---------
T ss_pred HHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-C-CCeeccCchhcCceEEEEEc-Ccc-CCCC---------
Confidence 11223444555544444 788899999999999999999 6 88775442 344 444543 210 0100
Q ss_pred hhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 423 EITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.++|+. +.++...+ .+++|++ ++..++++||++++++|+++++++
T Consensus 313 --~~~~~~~l~~~gi~-v~~~~~~~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 313 --FSEFYRRLKEQGFV-IYPGKVSQ-SDCFRIG-NIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp --HHHHHHHHHHTTEE-CEECCCSS-SCEEEEE-CCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred --HHHHHHHHHHCCEE-EECCcCCC-CCEEEEe-cCCCCCHHHHHHHHHHHHHHHHhc
Confidence 24567788888744 44332223 5799999 777889999999999999987653
No 38
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.7e-29 Score=247.63 Aligned_cols=343 Identities=15% Similarity=0.075 Sum_probs=229.0
Q ss_pred CCccccccCCCChHHhHHHHHHHHcCc---CC-cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATANT---NM-FTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~~---~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~ 148 (480)
..|+++...++.++.+.. .+...+.. +. ..|..++.......++++++++++|.++.++++|+|+|+++..++.+
T Consensus 27 ~~~ld~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~ 105 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVAT-TVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEA 105 (406)
T ss_dssp CEECBGGGCCCCCHHHHH-HHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHH
T ss_pred eEEEeCCCcCCCCHHHHH-HHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHH
Confidence 357777666656665553 33332221 11 12322333456677889999999999877899999999999888776
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH----cCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCC
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV----CGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~----~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
..... .||+ .|+++..+|+++..++.. .|. +++.+|++ +++.+|+++|+++++++
T Consensus 106 l~~~~-----------~~gd-~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~~~~d~~~l~~~l~~~----- 165 (406)
T 3cai_A 106 SSSRA-----------GLGY-EVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIETGELPTWQWESLISKS----- 165 (406)
T ss_dssp TGGGG-----------BTTC-EEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTTTCCCCGGGHHHHCCTT-----
T ss_pred Hhhcc-----------CCCC-EEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcccCCcCHHHHHHHhCCC-----
Confidence 52110 1445 788889999987666554 576 88999998 67899999999998754
Q ss_pred ccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccce-
Q psy12303 224 IPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCS- 302 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g- 302 (480)
+++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+..+.+.... ++|+++.|+||+++ |. +|
T Consensus 166 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~-------~~d~~~~s~~K~~g-~~-~G~ 235 (406)
T 3cai_A 166 -TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET-------DADVVTVNAHAWGG-PP-IGA 235 (406)
T ss_dssp -EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH-------CCSEEEEEGGGGTS-CS-CEE
T ss_pred -ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc-------CCCEEEeehhhhcC-CC-cCe
Confidence 899999999999999999999999999999999999999976554433223 68999999999876 55 77
Q ss_pred EEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcH--------------HHHHHH
Q psy12303 303 TIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGD--------------EGFEKQ 367 (480)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~--------------~~~~~~ 367 (480)
+++++ ++.......... +. +.. ....+..+ +... ...++..++..+.. ++++++
T Consensus 236 ~~~~~-~~~~~~l~~~~~-~~-~~~--~~~~~~~~------t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~ 304 (406)
T 3cai_A 236 MVFRD-PSVMNSFGSVST-NP-YAT--GPARLEIG------VHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSA 304 (406)
T ss_dssp EEESC-HHHHHTSCCCCS-CT-TCC--GGGGGCCS------CCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHH
T ss_pred EEEEe-hHHHhhcCCccc-CC-CCC--ccccccCC------CccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHH
Confidence 77764 444433221110 10 000 00001111 1111 11122333433211 147788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEecCC--ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee-
Q psy12303 368 IDRLMELAEYMVKKIKSMPDKFYLILEP--EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP- 444 (480)
Q Consensus 368 ~~~~~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~- 444 (480)
.++..++++++.+.|++ +++++++.+. ..+.++|.+. ... ..++.+.|.+.|+.+ ....
T Consensus 305 ~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~L~~~gi~v-~~g~~ 366 (406)
T 3cai_A 305 DAYLNRVFDYLMVSLRS-LPLVMLIGRPEAQIPVVSFAVH--KVP--------------ADRVVQRLADNGILA-IANTG 366 (406)
T ss_dssp HHHHHHHHHHHHHHHHT-CTTEEECCCCSSBCSEEEEEET--TBC--------------HHHHHHHHHHTTEEC-EECCS
T ss_pred HHHHHHHHHHHHHHHhc-CCCeEEcCCccccCCEEEEEEC--CcC--------------HHHHHHHHHHCCcEE-ecCCh
Confidence 89999999999999999 8899886542 3455555432 111 235667777777443 3321
Q ss_pred -----eCC---cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 445 -----LND---LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 445 -----~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..+ ..+++|++ ++..+|++||++++++|+++
T Consensus 367 ~~~~~~~g~~~~~~~iRis-~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 367 SRVLDVLGVNDVGGAVTVG-LAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp CHHHHHHTTTTTTCCEEEE-CCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCCeEEEE-eecCCCHHHHHHHHHHHHHh
Confidence 001 13789999 77888999999999999875
No 39
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=2.3e-29 Score=247.86 Aligned_cols=355 Identities=12% Similarity=0.046 Sum_probs=225.2
Q ss_pred CCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC----CCCeEECCChhHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ----GGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~----~~~~~~t~ggt~a~~~al~~ 148 (480)
+..+.+.+++..+...+.+.+..... ..+ +|.......+++++++++++.. +.++++|+|||+|+..++.+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~---~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~ 78 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSL---GHT--SPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASN 78 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCC---CTT--SHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhcccc---ccC--CHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHH
Confidence 34456666655544333333333222 112 4444445566778888888763 46799999999999999988
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecC-CCchhHHHHHHHcCCCCCCeEEeeC-CCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSD-QCHYSVRSCAAVCGLGTDNCVEVPS-DKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~-~~h~s~~~~~~~~g~~~~~v~~v~~-~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+... ..||+.+++... ..|.++...+...|. +++.+|+ +.++.+|+++|++++++. +++
T Consensus 79 ~~~~-----------~~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~-----~~~ 139 (385)
T 2bkw_A 79 FILS-----------KAPNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKIGESVPLELITEKLSQN-----SYG 139 (385)
T ss_dssp HSCT-----------TCSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSSTTSCCCHHHHHHHHHHS-----CCS
T ss_pred Hhcc-----------CCCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCCCCCCCHHHHHHHHhcC-----CCC
Confidence 7410 015563444423 334444567777787 8899999 888899999999999861 278
Q ss_pred EEEeccCCCccccccChHHHHHHHHHc--CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEE
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTI 304 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~ 304 (480)
+|++++++|++|.+.|+++|.++|++| |+++|+|++|+.+..+.+.... ++|++++|+||++++|.|+|++
T Consensus 140 ~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~-------~~d~~~~s~~K~~~~~~G~G~~ 212 (385)
T 2bkw_A 140 AVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEW-------GVDFALTASQKAIGAPAGLSIS 212 (385)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTT-------TCSEEEEESSSTTCCCSCEEEE
T ss_pred EEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccccccc-------CceEEEecCccccccCCcceEE
Confidence 999999999999999999999999999 9999999999876554332222 6899999999999988889999
Q ss_pred EEeCchhhH-hhh----cCCcccccccccccC--cccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy12303 305 HFKQDGLLI-SCN----QMSAEYLFMQDKLYD--VRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAE 376 (480)
Q Consensus 305 ~~~~~~~~~-~~~----~~~~~~l~~~~~~~~--~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~ 376 (480)
+++++ .+. ... .....|......... ..+..+......+.. ....++..+++.+...+++++.++..++++
T Consensus 213 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 291 (385)
T 2bkw_A 213 LCSSR-FMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSD 291 (385)
T ss_dssp EECHH-HHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEcHH-HHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 87654 333 221 001111100000000 000000000000111 122334445555444457888899999999
Q ss_pred HHHHHH-hcCCCCeEEecC-C----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-Ccc
Q psy12303 377 YMVKKI-KSMPDKFYLILE-P----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-DLP 449 (480)
Q Consensus 377 ~l~~~l-~~~~~g~~~~~~-~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-~~~ 449 (480)
++.+.| ++ + +++++.+ + ....+++.+ +. ..++.+.|.+.|+ .+.+.... ...
T Consensus 292 ~l~~~L~~~-~-g~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~l~~~gi-~v~~g~~~~~~~ 350 (385)
T 2bkw_A 292 WFKDSLVNG-L-QLTSVSRYPSNMSAHGLTAVYV-AD-----------------PPDVIAFLKSHGV-VIAGGIHKDIGP 350 (385)
T ss_dssp HHHHHHHTT-T-CCEESSCSSSTTBCSSCEEEEC-SC-----------------HHHHHHHHHHTTE-ECBCCCCTTTGG
T ss_pred HHHHHHHHh-c-CceecccCcccccCCceEEEec-CC-----------------HHHHHHHHHHCCe-EEeCCCCcccCC
Confidence 999999 88 6 8888642 1 234455543 11 1356677777774 34332211 125
Q ss_pred cEEEEe-ccc--CCCCHHHHHHHHHHHHHhhccC
Q psy12303 450 NFFRNI-ISS--AAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 450 ~~~R~~-~~~--~~~t~~di~~~~~~l~~~~~~l 480 (480)
+++|++ +.. +.+|++|++++++.|+++++++
T Consensus 351 ~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 351 KYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp GEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 799999 532 2579999999999999987753
No 40
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=4.7e-29 Score=243.51 Aligned_cols=342 Identities=11% Similarity=0.008 Sum_probs=228.0
Q ss_pred ccccccCCCCh-HHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHh
Q psy12303 75 FMNQLSCGLDV-VSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHK 152 (480)
Q Consensus 75 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~ 152 (480)
++++.+++..+ +.++..+.....+.....+..++...++.+++++++++++|.+ +.++++|+|||+|+..++.++..
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~- 83 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVE- 83 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCS-
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccC-
Confidence 45555555443 4444333334333321122246667788889999999999985 46799999999999999987743
Q ss_pred cCchhHhcCCCccCCceEEEecCCCchh--HHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEe
Q psy12303 153 MFPTYKEKGLSAIKGQLVMFTSDQCHYS--VRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNC 230 (480)
Q Consensus 153 ~~~~~~~~g~~~~~g~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~ 230 (480)
| + ++++. ..|++ +...+...|. +++.++.+.++.+|+++|+ +++ +|++|++
T Consensus 84 -------------~-~-~i~~~-~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~--~~~------~~~~v~~ 136 (362)
T 3ffr_A 84 -------------K-K-SFHCV-NGSFSKRFYEFAGELGR---EAYKEEAAFGKGFYPADIT--VPA------DAEIICL 136 (362)
T ss_dssp -------------S-E-EEEEE-CSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCGGGCC--CCT------TCCEEEE
T ss_pred -------------C-c-EEEEc-CcHHHHHHHHHHHHhCC---CeEEEecCCCCCCCHHHHh--ccC------CccEEEE
Confidence 3 2 34444 45555 3345666677 8899999888999999998 333 3899999
Q ss_pred ccCCCccccccChHHHHHHHHHc-CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCc
Q psy12303 231 TSGTTVLGAFDPIEEIADICQKY-NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQD 309 (480)
Q Consensus 231 ~~~~~~~G~~~~l~~I~~i~~~~-~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~ 309 (480)
++++|++|.+.|+++|.++|++| |+++|+|++|+.+....+. ..+|+++.++||++++|.|+|++++++.
T Consensus 137 ~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~---------~~~d~~~~s~~K~~~~~~G~g~~~~~~~ 207 (362)
T 3ffr_A 137 THNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDW---------TKIDSVFFSVQKCFGLPAGLGVWILNDR 207 (362)
T ss_dssp ESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCT---------TSCSEEEEETTSTTCCCSCCEEEEEEHH
T ss_pred EcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccCh---------hHCcEEEEecccccCCCCceEEEEECHH
Confidence 99999999999999999999999 9999999999876543321 1379999999999998889999887654
Q ss_pred hhhHhhhcCC-----cccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q psy12303 310 GLLISCNQMS-----AEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK 383 (480)
Q Consensus 310 ~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~ 383 (480)
.+....... ..+....... ......+ ....+.. ....++..+++.+..++++++.++..++++++.+.|+
T Consensus 208 -~~~~~~~~~~gg~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 283 (362)
T 3ffr_A 208 -VIEKSKALLAKRKSIGTYHTIPSM-LEKARVN--QTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIE 283 (362)
T ss_dssp -HHHHHHHHHHTTCCCCSTTSHHHH-HHHHTTT--CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHhhhccccCCCCcccccHHHH-HHHhhcC--CCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 333222111 1111000000 0000000 0001111 1233444555555555688999999999999999999
Q ss_pred cCCCCeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccC
Q psy12303 384 SMPDKFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSA 459 (480)
Q Consensus 384 ~~~~g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~ 459 (480)
+ +||++++.++ ...+++|... . . ..++.+.|.++|+.+.......+ .+++|++ ++.
T Consensus 284 ~-~~g~~~~~~~~~~~~~~~~~~~~~-~--~--------------~~~~~~~l~~~gi~~~~g~~~~~-~~~iRis-~~~ 343 (362)
T 3ffr_A 284 S-SKVFSFGVEDAKLRSMTTIVANTT-M--L--------------PGEINKILEPFDMAVGAGYGSKK-ETQIRIA-NFP 343 (362)
T ss_dssp H-CSSEEESSSCGGGBCSSEEEEEES-S--C--------------HHHHHHHHGGGTEEEEECSGGGT-TTEEEEE-CCT
T ss_pred H-ccCceeccCChhhcCCceEEEecC-C--C--------------HHHHHHHHHHCCeEEecCccccC-CCEEEEE-CCC
Confidence 9 8899987521 2344445432 1 1 24677888888754433211122 5799999 777
Q ss_pred CCCHHHHHHHHHHHHHhh
Q psy12303 460 AVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~~~ 477 (480)
.++++||+++++.|+++.
T Consensus 344 ~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 344 AHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 889999999999999875
No 41
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=5.1e-29 Score=246.84 Aligned_cols=359 Identities=15% Similarity=0.068 Sum_probs=214.9
Q ss_pred CCCCccccccCCCChHHhHHHHHHHH----cCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIAT----ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAF 146 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al 146 (480)
.+..|+++...++.++.+...+.... .++.. .+..+....+..+++++++++++|++++++++|+|||+|+..++
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~ 97 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGS-RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIAL 97 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHH
T ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHH
Confidence 34568888777766666654333222 12221 23334455677788999999999998778999999999999999
Q ss_pred HHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 147 LAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
.+++... .. ||+..|+++..+|+++...+..+...+.+++.+|.++++.+|+++|+++++++ ++
T Consensus 98 ~~l~~~~----~~------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~ 161 (400)
T 3vax_A 98 LGLAPYG----ER------TGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPD------TL 161 (400)
T ss_dssp HTTHHHH----HH------HTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTT------EE
T ss_pred HHHHHhh----cc------CCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCC------ce
Confidence 8876210 00 33326888888999988877765221228899999999999999999999764 89
Q ss_pred EEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE-
Q psy12303 227 FVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH- 305 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~- 305 (480)
+|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+. ... +|+++.|+||++ +|.|+|+++
T Consensus 162 ~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~------~~~--~d~~~~s~~K~~-g~~g~g~~~~ 232 (400)
T 3vax_A 162 LVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDL------TTP--IDMISISGHKIG-APKGVGALVT 232 (400)
T ss_dssp EEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGG------GSC--CSEEEEETGGGT-SCSSCEEEEE
T ss_pred EEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcCh------hhc--CcEEEEeHHHhC-CCCceEEEEE
Confidence 9999999999999999999999999999999999999876543321 122 799999999965 477899999
Q ss_pred EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKS 384 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~ 384 (480)
++++.+..... ....++...... ..+..+ +... ...++..++..+ .++++++.++..++++++.+.|+.
T Consensus 233 ~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~------~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 302 (400)
T 3vax_A 233 RRREEMDDERV-PLEPIMFGGGQE--RKLRPG------TLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLAS 302 (400)
T ss_dssp CBCSSSTTCBC-CCCCSSCSSCTG--GGTSCS------CCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecchhcccccc-ccCceecCCCce--eeeecC------CCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhCC
Confidence 88743321000 111111110000 000000 0001 112222333332 346788899999999999999984
Q ss_pred CCCCeEEecCCc---eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-------CCc-----c
Q psy12303 385 MPDKFYLILEPE---MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-------NDL-----P 449 (480)
Q Consensus 385 ~~~g~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-------~~~-----~ 449 (480)
+++++..++. .+.+.|... +.+..++.+.| . ...+...|..+...... .+. .
T Consensus 303 --~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L-----~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (400)
T 3vax_A 303 --TSFQVNGDQDHVVPHILNLSFE-----DVDAEAFLVTL-----K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAAS 369 (400)
T ss_dssp --TTCEECSCTTSBCTTEEEEECT-----TCCHHHHHHHH-----H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHT
T ss_pred --CCEEEeCCcccCCCCEEEEEeC-----CCCHHHHHHHH-----h-cCcEEEecccccCCCCCccHHHHHcCCCccccC
Confidence 8999875443 234555332 11111222111 1 33444455433322100 010 3
Q ss_pred cEEEEecc-cCCCCHHHHHHHHHHHHHhhcc
Q psy12303 450 NFFRNIIS-SAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 450 ~~~R~~~~-~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+++|++ + +..+|++|+++++++|++++++
T Consensus 370 ~~iRls-~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 370 KSLRFS-WTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp SEEEEE-EEEC--------------------
T ss_pred ceEEEE-ccCCCCCHHHHHHHHHHHHHHhcc
Confidence 799999 6 7888999999999999988764
No 42
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=2.5e-29 Score=246.42 Aligned_cols=303 Identities=15% Similarity=0.168 Sum_probs=214.4
Q ss_pred HHHHHHHHHH-HHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEK-MRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~-la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....+++++ +++++|.+ ++++|+|+|+|+..++.++.. ||+ .|+++..+|+++..++...|
T Consensus 52 ~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~~~~~~~~--------------~gd-~vl~~~~~~~~~~~~~~~~g 114 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFAVMHSLAK--------------KDA-WVVMDENCHYSSYVAAERAG 114 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHHHHHHHhC--------------CCC-EEEEccCcchHHHHHHHHcC
Confidence 4455678899 99999987 799999999999999988843 445 88999999999999999998
Q ss_pred CCCCCeEEee--CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 190 LGTDNCVEVP--SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 190 ~~~~~v~~v~--~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
. +++.+| .++++.+|+++|++++++...+ .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.
T Consensus 115 ~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~ 190 (371)
T 2e7j_A 115 L---NIALVPKTDYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGR 190 (371)
T ss_dssp C---EEEEECCCCTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTT
T ss_pred C---eEEEeecccCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCC
Confidence 8 888999 8888999999999999854221 348999999999999999999999999999999999999999976
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHh-hhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLIS-CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
...+.... ++|+++.|+||++++|.++|+++++++ .... .......+... ..+.. ++..
T Consensus 191 ~~~~~~~~-------~~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~------~~~~ 250 (371)
T 2e7j_A 191 MPVSLKEI-------GADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEKYKNKE------VELLG------CTAR 250 (371)
T ss_dssp BCCCHHHH-------TCSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSSCTTSB------GGGTT------CCCC
T ss_pred CCCChhhc-------CCCEEEecCCcCCCCCCCcEEEEEech-hhhhhccccccCcccc------ccccc------CCcC
Confidence 54332223 579999999999998888999998764 3322 22111111100 00000 1111
Q ss_pred C-CchHHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHHhcCCCCeEEecCC--ceeEEEEEeecCccCCCchhhHHHHh
Q psy12303 347 N-DIFKLWLQWRAKGDEGFEKQIDRL--MELAEYMVKKIKSMPDKFYLILEP--EMVNVSFWYLPTRVRNMPHEKRLNIL 421 (480)
Q Consensus 347 ~-~~l~~~~~l~~~g~~~~~~~~~~~--~~l~~~l~~~l~~~~~g~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~l 421 (480)
. ...++..+++.+.. +..++. .++++++.+.|++ . +++++.++ ..+.+++.+ + .
T Consensus 251 ~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~~-~-~------------- 309 (371)
T 2e7j_A 251 GATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEK-L-GIKQLGDNPHNHDLMFFHA-E-V------------- 309 (371)
T ss_dssp SHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHH-T-TCEEESSSSCCSSEEEEEC-H-H-------------
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-c-CcEEecCCCccCceEEEEC-C-C-------------
Confidence 1 12222233333221 566777 8899999999999 6 99887543 355555533 1 1
Q ss_pred hhhhHHHHHHHHhcccEEEeeeee-C---Cc-ccEEE-EecccCC-CCHHHHHHHHHHHHHhhccC
Q psy12303 422 GEITPILKGRMMQAGTMMVGYQPL-N---DL-PNFFR-NIISSAA-VTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 422 ~~~~~~i~~~l~~~g~~~~~~~~~-~---~~-~~~~R-~~~~~~~-~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.+.|+.+.. ... . +. .+++| ++ ++.. ++++++++++++|+++++++
T Consensus 310 ---~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~-~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 310 ---LYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFK-LSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp ---HHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEE-EECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEE-eeccCCCHHHHHHHHHHHHHHHHhc
Confidence 13455566666643322 100 0 11 46899 99 6666 89999999999999987653
No 43
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=235.29 Aligned_cols=383 Identities=14% Similarity=0.147 Sum_probs=242.8
Q ss_pred CCCCCCCCCCHHHHHHHHHhhccCCccCCCCCccccccCCCChHHhHHHHHHH-------HcCcCCcchhcChh------
Q psy12303 43 DLDIPEKGLPLQKLIDDCFTTLKYQVRTGHPMFMNQLSCGLDVVSMAGEWLIA-------TANTNMFTYEIAPV------ 109 (480)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~------ 109 (480)
..++|++|.+.+.|.-.+.++-. ..+.+|.++...+---.-+.-.+++. .+..++..-+..|.
T Consensus 38 ~r~~P~~g~~d~~ie~~l~~la~----mdsnn~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssl 113 (501)
T 3hl2_A 38 KGKCPENGWDESTLELFLHELAI----MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 113 (501)
T ss_dssp HCCCCSSCCCHHHHHHHHHHHHT----TBGGGCSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHH
T ss_pred cCCCCccCCCHHHHHHHHHHHHh----hccCCCcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHH
Confidence 47899999999998888877643 22223444443332221111122221 11222211121221
Q ss_pred -hHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 110 -FILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 110 -~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
..--+..+.+|++.+ |++. ...++++|+|.+++..+.++..+. .||...|+++..+|.|+.+++.+
T Consensus 114 l~~ltn~l~ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~-----------rpg~d~VIvpRn~HKSv~kAliL 181 (501)
T 3hl2_A 114 LNKITNSLVLDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHK-----------RPKAKYIIWPRIDQKSCFKSMIT 181 (501)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHH-----------CTTCCEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcc-----------cCCCCEEEEecchHHHHHHHHHH
Confidence 122344567888888 9986 457788888877777776665531 12323788899999999999999
Q ss_pred cCCCCCCeEEeeC---CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCc-cccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 188 CGLGTDNCVEVPS---DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTV-LGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 188 ~g~~~~~v~~v~~---~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~-~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
+|+ +.++|+. ++...+|+++++++|++. +....+++++.+++. .|.++||++|+++|++||+|+|||+||
T Consensus 182 ~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAh 255 (501)
T 3hl2_A 182 AGF---EPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAY 255 (501)
T ss_dssp TTC---EEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTT
T ss_pred cCC---eEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcc
Confidence 999 5566654 345789999999999986 212344444444343 457799999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
|+...++..... .......+|+++.|+||++.+|.+++++++++++.++.... .|. + ..
T Consensus 256 Gah~~~~~~lp~-sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---~yP-G------------r~---- 314 (501)
T 3hl2_A 256 GVQSSKCMHLIQ-QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYP-G------------RA---- 314 (501)
T ss_dssp CTTCHHHHHHHH-HHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---TSC-S------------CB----
T ss_pred hhhhhhhhhhHH-HHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHHH---hCC-C------------CC----
Confidence 998754432111 01111139999999999999999988888888877665422 221 0 00
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCce-eEEEEEeecCccCCCchhhHHH
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEM-VNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
..+.++++|+++..+|.+||++++++..+++++|.+.|++ +. |-+++..|.. -.+++... .+... . ..
T Consensus 315 -S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~-la~~~ge~ll~~~~n~is~a~tl~--~~~~~-~---~~ 386 (501)
T 3hl2_A 315 -SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK-LSEAYNERLLHTPHNPISLAMTLK--TLDEH-R---DK 386 (501)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCCBCCCTTCSSEEEEECT--TSCTT-T---SC
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcChhhcCCCCCceeEEEecc--ccccc-c---cc
Confidence 1246788999999999999999999999999999999988 53 3455543321 22223221 11110 0 01
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeee--------eC-------Cc-ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQP--------LN-------DL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~--------~~-------~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+..+...++.+-.. |.-++..+. +. .. ..|+-++ +...++++|||.+++.|+++..
T Consensus 387 ~~t~~gs~Lf~r~vs-G~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a-~aiG~~~~~v~~~~~~l~~~~~ 459 (501)
T 3hl2_A 387 AVTQLGSMLFTRQVS-GARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA-SAIGMKMQDVDLFIKRLDRCLK 459 (501)
T ss_dssp HHHHHHHHHHHTTCC-SCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEE-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCC-cceeecCCCceEECCeeecCcccCCCCCCchHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 122223334443322 211222211 11 11 3578888 8899999999999999998764
No 44
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=9e-28 Score=239.16 Aligned_cols=349 Identities=13% Similarity=0.110 Sum_probs=225.3
Q ss_pred CCccccccCCCChHHhHHHHHHHHcCcC---Ccc--hhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATANTN---MFT--YEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~--~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~ 147 (480)
..|+++...++.++.+. +.+...+... ... +. .+.......++++++++++|.+++++++|+|+|+++..++.
T Consensus 29 ~~yld~~~~~~~~~~v~-~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~ 106 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAAL-ARAQAVIAEEWGNGLIRSWN-SAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLS 106 (416)
T ss_dssp CEECCTTTSCCCBTTHH-HHHHHHHHTCCCCCGGGHHH-HTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHH
T ss_pred eEeecCCCcCCCcHHHH-HHHHHHHHHHHhccCccccc-hhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHH
Confidence 35677655555555555 3333333211 111 11 11223555678899999999987789999999999988888
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH----c--CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV----C--GLGTDNCVEVPSDKRGRLIPSELERLVLERKAK 221 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~----~--g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~ 221 (480)
+++... . .+ .||+.+|+++..+|+++..++.. . |. +++.+|. +++|+++++++
T Consensus 107 ~~~~~~----~-~~---~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~-------~~~l~~~i~~~--- 165 (416)
T 1qz9_A 107 AALRVQ----A-TR---SPERRVIVTETSNFPTDLYIAEGLADMLQQGY---TLRLVDS-------PEELPQAIDQD--- 165 (416)
T ss_dssp HHHHHH----H-HH---STTCCEEEEETTSCHHHHHHHHHHHHHHCSSC---EEEEESS-------GGGHHHHCSTT---
T ss_pred hhcccc----c-cc---CCCCcEEEEcCCCCCchHHHHHHHHHHhcCCc---eEEEeCc-------HHHHHHHhCCC---
Confidence 775210 0 00 04454688888899987665433 3 65 7778876 77888888653
Q ss_pred CCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccc
Q psy12303 222 GDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQC 301 (480)
Q Consensus 222 ~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~ 301 (480)
+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.... ++|++++|+||+++++.++
T Consensus 166 ---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~-------~~d~~~~s~~K~l~~g~~~ 235 (416)
T 1qz9_A 166 ---TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA-------GADYAIGCTYKYLNGGPGS 235 (416)
T ss_dssp ---EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH-------TCSEEEECSSSTTCCCTTC
T ss_pred ---ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc-------CCCEEEecCcccCCCCCCC
Confidence 899999999999999999999999999999999999999976554332222 5899999999998777777
Q ss_pred -eEEEEeCchhhHhhhcCCccccccccc-ccCcccCCC--CccccCC-CCC-CchHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy12303 302 -STIHFKQDGLLISCNQMSAEYLFMQDK-LYDVRYDTG--DKVIQCG-RHN-DIFKLWLQWRAKGDEGFEKQIDRLMELA 375 (480)
Q Consensus 302 -g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~--~~~~~~~-r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~ 375 (480)
|+++++++ ...........|...... .....+.+. ......+ ... ...++..+++.+..++++++.++..+++
T Consensus 236 ~g~l~~~~~-~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 314 (416)
T 1qz9_A 236 QAFVWVSPQ-LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALT 314 (416)
T ss_dssp CCEEEECTT-TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred eEEEEECHH-HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99987654 333222211122111000 000000000 0011111 111 2234445566554457788899999999
Q ss_pred HHHHHHHhcCC-C--CeEEecCC----ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCc
Q psy12303 376 EYMVKKIKSMP-D--KFYLILEP----EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDL 448 (480)
Q Consensus 376 ~~l~~~l~~~~-~--g~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~ 448 (480)
+++.+.|++ . + +++++.++ ..+++++.+ +. ..++.+.|.++|+. +.. .+
T Consensus 315 ~~l~~~L~~-~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~l~~~l~~~gi~-~~~---~~- 370 (416)
T 1qz9_A 315 DLFIELVEQ-RCAAHELTLVTPREHAKRGSHVSFEH-PE-----------------GYAVIQALIDRGVI-GDY---RE- 370 (416)
T ss_dssp HHHHHHHHH-HHTTSCCEECSCSSGGGBCSEEEEEC-TT-----------------HHHHHHHHHTTTEE-CEE---ET-
T ss_pred HHHHHHHHh-hccCCCeEEeCCCCHHHcCCEEEEec-CC-----------------HHHHHHHHHhCCcE-ecc---CC-
Confidence 999999988 5 5 89886543 244555532 11 13566778888843 322 13
Q ss_pred ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 449 PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 449 ~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+++|+++.++.+|++||++++++|++++++
T Consensus 371 ~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 371 PRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp TTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 5799999433589999999999999987653
No 45
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=1.5e-27 Score=232.57 Aligned_cols=333 Identities=17% Similarity=0.129 Sum_probs=222.7
Q ss_pred ccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcC
Q psy12303 75 FMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMF 154 (480)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~ 154 (480)
||+....+..++.+. +.+...+.. |....+...+.+++++++++++|.+++++++|+|||+|+..++.+++.
T Consensus 17 ~l~~~~~~~~~~~v~-~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~--- 88 (359)
T 1svv_A 17 SFVNDYSVGMHPKIL-DLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALR--- 88 (359)
T ss_dssp ECSCSCSSCCCHHHH-HHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCC---
T ss_pred EecCCCcCCCCHHHH-HHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhC---
Confidence 454433344445444 555554442 333344567888999999999999887899999999999999988854
Q ss_pred chhHhcCCCccCCceEEEecCCCchhHHH--HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHH-HCCCccEEEEec
Q psy12303 155 PTYKEKGLSAIKGQLVMFTSDQCHYSVRS--CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERK-AKGDIPFFVNCT 231 (480)
Q Consensus 155 ~~~~~~g~~~~~g~~~vl~~~~~h~s~~~--~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~-~~~~~~~~v~~~ 231 (480)
||+ .|+++..+|+++.. .+...|. +++.+|.+ ++.+|+++|++++++.. .++.++++|+++
T Consensus 89 -----------~gd-~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~ 152 (359)
T 1svv_A 89 -----------PWE-AVIATQLGHISTHETGAIEATGH---KVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYIS 152 (359)
T ss_dssp -----------TTE-EEEEETTSHHHHSSTTHHHHTTC---CEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEE
T ss_pred -----------CCC-EEEEcccchHHHHHHHHHhcCCC---eeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEE
Confidence 445 88999999999887 4777777 88999986 78899999999997641 233458999999
Q ss_pred cCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC-CCCccceeCccccCCCcccceEEEEe
Q psy12303 232 SGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFK 307 (480)
Q Consensus 232 ~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~ 307 (480)
++ |++|.+.| +++|.++|++||+++|+|++|.++......... ...++ ..+|++++++||+++ |.++|+++++
T Consensus 153 ~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~~K~g~-~~~~g~l~~~ 229 (359)
T 1svv_A 153 NT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIARLTDMFYIGATKAGG-MFGEALIILN 229 (359)
T ss_dssp SS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHHHHCSEEEEECTTTTC-SSCEEEEECS
T ss_pred cC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhhhcCCEEEEecccCCC-CCceEEEEEc
Confidence 98 68999988 899999999999999999999543221100000 00000 157999999999855 7888888875
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
+ +....... +...... ....+ ......+ ...+...++++..++..++++++.+.| + .+
T Consensus 230 ~-~~~~~~~~----~~~~~~~-----------~~~~~--~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~l~~~L-~-~~ 287 (359)
T 1svv_A 230 D-ALKPNARH----LIKQRGA-----------LMAKG--WLLGIQF--EVLMKDNLFFELGAHSNKMAAILKAGL-E-AC 287 (359)
T ss_dssp G-GGCTTHHH----HHHHTTC-----------CCTTT--HHHHHHH--HHHTSTTHHHHHHHHHHHHHHHHHHHH-H-HT
T ss_pred c-cHHHHHHH----HHhcCCc-----------ccccc--hhhHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHh-c-cC
Confidence 4 33322211 0000000 00000 0011111 123444567788899999999999999 5 58
Q ss_pred CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCcccEEEEecccCCCCHHHH
Q psy12303 388 KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDLPNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di 466 (480)
+++++.+.. ..+++...+ .++.++|.++ |+.+.. ......+++|++ ++..++++||
T Consensus 288 ~~~~~~~~~-~~~~~~~~~-------------------~~~~~~l~~~~gi~v~~--~~~~~~~~iRi~-~~~~~~~~~i 344 (359)
T 1svv_A 288 GIRLAWPSA-SNQLFPILE-------------------NTMIAELNNDFDMYTVE--PLKDGTCIMRLC-TSWATEEKEC 344 (359)
T ss_dssp TCCBSSCCS-SSEECBEEE-------------------HHHHHHHTTTEECEEEE--EETTTEEEEEEE-CCTTCCHHHH
T ss_pred CeEEccCCc-cceEEEEcC-------------------HHHHHHHHHhcCEEEEe--cccCCCceEEEE-ccCcCCHHHH
Confidence 988764443 333321111 2466788888 866522 212225799999 8888999999
Q ss_pred HHHHHHHHHhhcc
Q psy12303 467 DFLLTEMDRLGHD 479 (480)
Q Consensus 467 ~~~~~~l~~~~~~ 479 (480)
++++++|++++++
T Consensus 345 ~~~~~~l~~~~~~ 357 (359)
T 1svv_A 345 HRFVEVLKRLVAS 357 (359)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998765
No 46
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.96 E-value=1.9e-27 Score=234.73 Aligned_cols=333 Identities=10% Similarity=0.030 Sum_probs=228.3
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|... ..++++++++++++.+| .++.++++|+|+|+|+..++.++..
T Consensus 42 ~~~v~-~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~----------- 107 (391)
T 3dzz_A 42 APEIM-ASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTS----------- 107 (391)
T ss_dssp CHHHH-HHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSC-----------
T ss_pred CHHHH-HHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCC-----------
Confidence 34444 55555554433444322 57889999999999999 5567899999999999999988743
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC---CCCCCHHHHHHHHH-HHHHCCCccEEEEeccCCCccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK---RGRLIPSELERLVL-ERKAKGDIPFFVNCTSGTTVLG 238 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~---~~~~d~~~L~~~i~-~~~~~~~~~~~v~~~~~~~~~G 238 (480)
||+ .|+++..+|.++..++...|. +++.+|.+. ++.+|+++|+++++ ++ +++|++++++|++|
T Consensus 108 ---~gd-~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~~v~i~~p~nptG 174 (391)
T 3dzz_A 108 ---PGD-QILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATPS------VRMMVFCNPHNPIG 174 (391)
T ss_dssp ---TTC-EEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTSTT------EEEEEEESSBTTTT
T ss_pred ---CCC-eEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhccC------ceEEEEECCCCCCC
Confidence 445 889999999999999999988 788888852 34599999999997 33 89999999999999
Q ss_pred cc---cChHHHHHHHHHcCcEEEeeccccccccccccccCcccC-CCCCCc--cceeCccccCC-CcccceEEEEeCchh
Q psy12303 239 AF---DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLT-GIERAD--SVTWNPHKLMG-TLLQCSTIHFKQDGL 311 (480)
Q Consensus 239 ~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D--~~~~s~hK~~~-~p~~~g~~~~~~~~~ 311 (480)
.+ .++++|.++|++||+++|+|++|+.+......... ... ..+..| +++.|+||+++ .+.++|+++++++++
T Consensus 175 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 253 (391)
T 3dzz_A 175 YAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITP-AFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDL 253 (391)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCC-GGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHH
T ss_pred cccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCcee-hhhcCccccCcEEEEEeChhhccccchhheEEEECCHHH
Confidence 99 77999999999999999999999976653221111 111 111255 88899999997 456789998876665
Q ss_pred hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 312 LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
..........+.. + ........++..++.. +.+.++++.++..++++++.+.|++++|++++
T Consensus 254 ~~~~~~~~~~~~~--------------~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 315 (391)
T 3dzz_A 254 RARAEESFFLAGI--------------G---EPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKV 315 (391)
T ss_dssp HHHHHHHHHHHTC--------------S---SCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHhhcc--------------C---CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 5443211000000 0 0011122233333433 45668888899999999999999873479987
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~ 469 (480)
. .+..+.+.+...+.. +.+ ..++.++|. +.|+.+.....+.. ..+++|++ ++ +++++|+++
T Consensus 316 ~-~~~~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis-~~--~~~~~i~~~ 378 (391)
T 3dzz_A 316 L-DSNASYLAWVDISAL--GMN-----------AEDFCKYLREKTGLIISAGNGYRGNGHEFVRIN-LA--CPKELVIDG 378 (391)
T ss_dssp C-CCCBSSEEEEECGGG--CSC-----------HHHHHHHHHHHHCEECEESGGGCTTGGGEEEEE-CC--SCHHHHHHH
T ss_pred e-ccCceEEEEEehhhc--CCC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE-ec--CCHHHHHHH
Confidence 5 455555543322211 000 245677785 67744433221211 15899999 44 689999999
Q ss_pred HHHHHHhhccC
Q psy12303 470 LTEMDRLGHDL 480 (480)
Q Consensus 470 ~~~l~~~~~~l 480 (480)
++.|+++++++
T Consensus 379 l~~l~~~l~~~ 389 (391)
T 3dzz_A 379 MQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999987653
No 47
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.95 E-value=3.4e-27 Score=236.19 Aligned_cols=360 Identities=15% Similarity=0.111 Sum_probs=226.0
Q ss_pred CCccccccCCCChHHhHHHHHHHHcC--cCC-cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 73 PMFMNQLSCGLDVVSMAGEWLIATAN--TNM-FTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 73 p~~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
..|+++..+++.++.+...+.....+ .+. ..|..++...+...++++++++++|+++.++++|+|+|+|+..++.++
T Consensus 19 ~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 98 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHST 98 (432)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHH
T ss_pred cEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHH
Confidence 45777766666666665433332211 111 223334455677788999999999998778999999999999999988
Q ss_pred HHhcCchhHhcCCC------ccCCceEEEecCCCchhHHHHHHH----cCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHH
Q psy12303 150 RHKMFPTYKEKGLS------AIKGQLVMFTSDQCHYSVRSCAAV----CGLGTDNCVEVPSDK-RGRLIPSELERLVLER 218 (480)
Q Consensus 150 ~~~~~~~~~~~g~~------~~~g~~~vl~~~~~h~s~~~~~~~----~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~ 218 (480)
...+.......|.. ..++...|+++..+|+++..++.. .|. +++.+|.++ ++.+|+++|+++++++
T Consensus 99 ~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~~d~~~l~~~i~~~ 175 (432)
T 3a9z_A 99 VRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKVNGQVEVEDILAAVRPT 175 (432)
T ss_dssp HHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTTTSSCCHHHHHHTCCTT
T ss_pred HhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcccCCcCHHHHHHhccCC
Confidence 52110000011210 011123788999999998777654 355 888999886 7889999999988754
Q ss_pred HHCCCccEEEEeccCCCccccccChHHHHHHHHHcC----------cEEEeeccccccccccccccCcccCCCCCCccce
Q psy12303 219 KAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN----------MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVT 288 (480)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~----------~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~ 288 (480)
+++|++++++|++|.+.|+++|.++|+++| +++|+|++|+.+....+.... ++|+++
T Consensus 176 ------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~-------~~d~~~ 242 (432)
T 3a9z_A 176 ------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL-------GVDFLT 242 (432)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH-------CCSEEE
T ss_pred ------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc-------CCCEEE
Confidence 899999999999999999999999999999 999999999876543332222 679999
Q ss_pred eCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHH
Q psy12303 289 WNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQ 367 (480)
Q Consensus 289 ~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~ 367 (480)
.|+||+++ |. +|++++++...... ..+.+. +.... ..+..+ +... ...++..+++.+ .++++++
T Consensus 243 ~s~~K~~g-~~-~G~~~~~~~~~~~~---~~~~~~-~~~~~--~~~~~~------~~~~~~~~a~~aal~~~-~~~~~~~ 307 (432)
T 3a9z_A 243 IVGHKFYG-PR-IGALYVRGVGKLTP---LYPMLF-GGGQE--RNFRPG------TENTPMIAGLGKAADLV-SENCETY 307 (432)
T ss_dssp EEGGGTTC-CS-CEEEEETTBTTTBC---CCCSCC-SSCGG--GGTSCS------CCCHHHHHHHHHHHHHH-HHHHHHH
T ss_pred EehhHhcC-Cc-ceEEEEccccccCC---cCceee-cCCcc--ccccCC------CcCHHHHHHHHHHHHHH-HhhHHHH
Confidence 99999975 66 99999876531111 111111 11000 001111 1111 122333344433 3577888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEe--cC----Cc-eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH----Hhcc
Q psy12303 368 IDRLMELAEYMVKKIKSMPDKFYLI--LE----PE-MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM----MQAG 436 (480)
Q Consensus 368 ~~~~~~l~~~l~~~l~~~~~g~~~~--~~----~~-~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l----~~~g 436 (480)
.++..++++++.+.|++ ++|+++. .+ .. ...++|.+..... +. .++.+.+ .+.|
T Consensus 308 ~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~l~~i~~~~G 372 (432)
T 3a9z_A 308 EAHMRDIRDYLEERLEA-EFGKRIHLNSRFPGVERLPNTCNFSIQGSQL---RG-----------YMVLAQCQTLLASVG 372 (432)
T ss_dssp HHHHHHHHHHHHHHHHH-HHGGGEEESSCCTTCCBCTTEEEEEECSTTC---CH-----------HHHHHHCSSEECBSS
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEeCCCCcccCCCCEEEEEeCCCCC---cH-----------HHHHHHhcCeEEecc
Confidence 99999999999999988 6665432 32 11 2345565432111 11 1222222 1112
Q ss_pred cEEEeee--------eeCCc-----ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 437 TMMVGYQ--------PLNDL-----PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 437 ~~~~~~~--------~~~~~-----~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+.... ...+. .+++|++ ++..+|++|++++++.|++++++
T Consensus 373 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis-~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 373 ASCHSDHEDRPSPVLLSCGIPVDVARNAVRLS-VGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp CGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCccHHHHhcCCCccccCceEEEE-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 1110000 00010 3699999 77888999999999999987653
No 48
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.95 E-value=6.8e-27 Score=230.60 Aligned_cols=322 Identities=11% Similarity=0.108 Sum_probs=223.4
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ 168 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~ 168 (480)
+.+...+......|...++..++++++.+++.+.+|. +++++++|+|||+|+..++.++.. ||+
T Consensus 50 ~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--------------~gd 115 (388)
T 1j32_A 50 EAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIE--------------PGD 115 (388)
T ss_dssp HHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcC--------------CCC
Confidence 4444444332334554556788999999999998886 456899999999999999988743 445
Q ss_pred eEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---h
Q psy12303 169 LVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---I 243 (480)
Q Consensus 169 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l 243 (480)
.|+++..+|+++..+++..|. +++.+|.++ ++.+|+++|+++++++ +++|++++++|++|.+.| +
T Consensus 116 -~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l 185 (388)
T 1j32_A 116 -EVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYTPDEV 185 (388)
T ss_dssp -EEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred -EEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHHHH
Confidence 788889999999999999888 788899875 5789999999998754 889999999999999954 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCC----CCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI----ERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~----~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~ 318 (480)
++|.++|++||+++|+|++|+.+........ .+..+ .+.|+++.|+||+++.| ..+|++++++ +........
T Consensus 186 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~ 262 (388)
T 1j32_A 186 RAIAQVAVEAGLWVLSDEIYEKILYDDAQHL--SIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV-PLVKAATKI 262 (388)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCC--CGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH-HHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCC--CHHHccccccCCEEEEeechhccCCcccceEEEEeCH-HHHHHHHHH
Confidence 9999999999999999999998654221110 01111 24688999999999733 4589988654 343332211
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
...+ .+ ....+..++++..+ +.+.++++.++..++++++.+.|++ .++++++ .|.
T Consensus 263 ~~~~---------------~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~~~ 319 (388)
T 1j32_A 263 QGHS---------------TS------NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA-MPGLECP-KPD 319 (388)
T ss_dssp HHTT---------------TC------SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT-CTTCBCC-CCC
T ss_pred Hhhc---------------cc------CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhh-CCCCccc-CCC
Confidence 0000 00 01233333333333 4566788889999999999999999 8898875 455
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
.+.+++...+.. +.+ ..++.+.|.+ .|+.+.....+.. .+++|+++ . +++++|+++++.|++
T Consensus 320 ~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~-~--~~~~~i~~~~~~l~~ 382 (388)
T 1j32_A 320 GAFYMFPSIAKT--GRS-----------SLDFCSELLDQHQVATVPGAAFGA-DDCIRLSY-A--TDLDTIKRGMERLEK 382 (388)
T ss_dssp BTTEECCBCGGG--TCC-----------HHHHHHHHHHHHCEECEEGGGGTC-TTBEEEEC-C--SCHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCC--CCC-----------HHHHHHHHHHhCCEEEeChhhhCC-CCcEEEEe-c--CCHHHHHHHHHHHHH
Confidence 554444222210 000 2456677775 5744433222222 47899994 3 689999999999998
Q ss_pred hhcc
Q psy12303 476 LGHD 479 (480)
Q Consensus 476 ~~~~ 479 (480)
++++
T Consensus 383 ~l~~ 386 (388)
T 1j32_A 383 FLHG 386 (388)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 49
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.95 E-value=2.3e-27 Score=231.06 Aligned_cols=301 Identities=18% Similarity=0.195 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH--HHHc
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC--AAVC 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~--~~~~ 188 (480)
.....++++++++++| ++.++++|+|||+|+..++.+++. ||+ .|+++..+|++...+ +..+
T Consensus 42 ~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~--------------~gd-~vi~~~~~~~~~~~~~~~~~~ 105 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTP--------------PWG-NIYCHPASHINNDECGAPEFF 105 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCC--------------TTE-EEEECTTSHHHHSSTTHHHHH
T ss_pred chHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcC--------------CCC-EEEEcCccchhhhhchHHHHH
Confidence 4567788999999999 544589999999999999887643 445 788899999988766 7777
Q ss_pred --CCCCCCeEEeeCCCCCCCCHHHHHH-HHHHHH-HCCCccEEEEeccCCCcccc---ccChHHHHHHHHHcCcEEEeec
Q psy12303 189 --GLGTDNCVEVPSDKRGRLIPSELER-LVLERK-AKGDIPFFVNCTSGTTVLGA---FDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 189 --g~~~~~v~~v~~~~~~~~d~~~L~~-~i~~~~-~~~~~~~~v~~~~~~~~~G~---~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
|. +++.+|.+ ++.+|+++|++ ++++.. ..+.++++|+++++++ +|. .+++++|.++|++||+++|+|+
T Consensus 106 ~~g~---~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~ 180 (356)
T 1v72_A 106 SNGA---KLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDG 180 (356)
T ss_dssp TTSC---EEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCCc---EEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 77 78888875 57899999999 886421 1223589999999865 999 5668999999999999999999
Q ss_pred cccccccccccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
+|+.+......... ...++ .++|++++++||+ +.|.|+|+++. +++....... +... .+.
T Consensus 181 a~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~~~~-----~~~~---------~~~-- 241 (356)
T 1v72_A 181 SRFANALVSLGCSP-AEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATEMSY-----RRKR---------AGH-- 241 (356)
T ss_dssp TTHHHHHHHHTCCT-TTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHHHHH-----HHHH---------TTC--
T ss_pred hhhHhHhccCCCCH-HHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhhHHH-----Hhhc---------cCc--
Confidence 99865321111111 11111 2678999999999 56777778776 5554443221 0000 000
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHH
Q psy12303 341 IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 341 ~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
. ...........+..+..+.+.++.++..++++++.+.|++ ++|+++..++....+++.+ +
T Consensus 242 ~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~-~-------------- 302 (356)
T 1v72_A 242 L---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG-LGGVEVLGGTEANILFCRL-D-------------- 302 (356)
T ss_dssp C---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT-CTTEEEESCCCSSEEEEEE-C--------------
T ss_pred h---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-CCCcEEccCCCccEEEEEc-C--------------
Confidence 0 0011222333344444445666788889999999999999 8899987554444444432 1
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.++.++|.++|+.+... .+ + .+++|++ ++..+|++++++++++|++++++
T Consensus 303 -----~~~~~~l~~~gi~v~~g-~~-~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 303 -----SAMIDALLKAGFGFYHD-RW-G-PNVVRFV-TSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp -----HHHHHHHHHTTCBCBCS-SS-S-TTEEEEE-CCTTCCHHHHHHHHHHHHHTC--
T ss_pred -----HHHHHHHHhcCeEEecc-cc-C-CCeEEEE-ecCCCCHHHHHHHHHHHHHHHHh
Confidence 14566777778544321 22 2 4799999 88889999999999999988754
No 50
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=1.9e-26 Score=230.26 Aligned_cols=301 Identities=16% Similarity=0.134 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++++++++++|.+ ..+++++||+||..++.++.+ +|+ .|+++..+|.++..++...|.
T Consensus 108 ~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~al~~l~~--------------~gd-~vl~~~~~h~~~~~~~~~~g~ 170 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT--GAIVFSTGYMANLGIISTLAG--------------KGE-YVILDADSHASIYDGCQQGNA 170 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHSC--------------TTC-EEEEETTCCHHHHHHHHHSCS
T ss_pred cHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHHHHHHhcC--------------CCC-EEEECCcccHHHHHHHHHcCC
Confidence 466677888899999986 478888899999998887643 445 888999999999999999887
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.+|. +|+++|++++++... .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+++.+..
T Consensus 171 ---~~~~~~~-----~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~ 240 (427)
T 2w8t_A 171 ---EIVRFRH-----NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGP 240 (427)
T ss_dssp ---EEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSST
T ss_pred ---eeEEeCC-----CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCC
Confidence 7777774 599999999976211 148999999999999999999999999999999999999999876531
Q ss_pred ccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CC
Q psy12303 271 KKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-ND 348 (480)
Q Consensus 271 ~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~ 348 (480)
.........++ .++|+++.++||+++ +.| |+++.+ +++.........+|... ++-. ..
T Consensus 241 ~g~~~~~~~~~~~~~di~~~s~sK~~g-~~g-G~v~~~-~~l~~~l~~~~~~~~~~-----------------~~~~~~~ 300 (427)
T 2w8t_A 241 NGRGVYEAQGLEGQIDFVVGTFSKSVG-TVG-GFVVSN-HPKFEAVRLACRPYIFT-----------------ASLPPSV 300 (427)
T ss_dssp TSCCHHHHTTCTTCCSEEEEESSSTTC-SCC-EEEEEC-CTTGGGGGGTCHHHHSS-----------------CCCCHHH
T ss_pred CCCchHhhcCCCcCCcEEEecchhhhc-cCC-CEEEeC-HHHHHHHHHhccccccc-----------------CCCCHHH
Confidence 11000011222 267999999999998 344 777764 44444333221222211 0100 11
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
..++..+++.+. .++++.++..++++++.+.|++ . |+++..++ ...++.+.+ +.. . ...+
T Consensus 301 ~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~-~~~------------~--~~~~ 361 (427)
T 2w8t_A 301 VATATTSIRKLM--TAHEKRERLWSNARALHGGLKA-M-GFRLGTETCDSAIVAVML-EDQ------------E--QAAM 361 (427)
T ss_dssp HHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHH-H-TCEESCSSCCSSEEEEEE-SSH------------H--HHHH
T ss_pred HHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCCCCCEEEEEE-CCH------------H--HHHH
Confidence 222223444332 2467788999999999999999 5 88886455 555555543 211 0 0246
Q ss_pred HHHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 428 LKGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.|.++|+. +.+....+ ..+++|++ ++..+|++||++++++|++++++
T Consensus 362 l~~~L~~~Gi~-v~~~~~~~~~~~~~~lRi~-~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 362 MWQALLDGGLY-VNMARPPATPAGTFLLRCS-ICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp HHHHHHHTTEE-CEEECTTTSCTTCEEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeE-EeeeCCCCCCCCCeEEEEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 77888888854 33322221 13699999 77889999999999999987653
No 51
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.95 E-value=1.2e-26 Score=229.00 Aligned_cols=324 Identities=14% Similarity=0.127 Sum_probs=221.0
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCC-eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGD-SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG 167 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~-~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g 167 (480)
+.+...+......|....+..++++.+.+++.+.+|. ++++ +++|+|||+|+..++.++.. ||
T Consensus 46 ~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~--------------~g 111 (389)
T 1gd9_A 46 EYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK--------------DG 111 (389)
T ss_dssp HHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCC--------------TT
T ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCC--------------CC
Confidence 4444444332334544456788999999999888894 5668 99999999999998876632 44
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
+ .|+++.++|+++..++...|. +++.+|.++ ++.+|+++|+++++++ +++|++++++|++|.+.|
T Consensus 112 d-~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~ 181 (389)
T 1gd9_A 112 E-EVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVLTKKD 181 (389)
T ss_dssp C-EEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHH
T ss_pred C-EEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCCCHHH
Confidence 5 788888999999999999988 788999875 4679999999998753 889999999999999974
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccc-cCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKY-RHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|++||+++|+|++|+.+....... ....+.+..+.|+++.|+||+++.| ..+|+++++ +...........
T Consensus 182 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~ 260 (389)
T 1gd9_A 182 LEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-SWIIERMVKFQM 260 (389)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEEC-HHHHHHHHHHHh
Confidence 9999999999999999999999876532101 0101223336789999999999743 457988875 444433321110
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHH--HHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDE--GFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~--~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
.+. + ....+...++...+ +.+ .++++.++..++++++.+.|++ . |+++. .|.
T Consensus 261 ~~~---------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~ 316 (389)
T 1gd9_A 261 YNA---------------T------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-M-GLPTV-KPK 316 (389)
T ss_dssp TTT---------------C------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCC-CCC
T ss_pred hhc---------------c------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH-c-CCeec-CCC
Confidence 000 0 01222223333222 234 6788888999999999999999 6 88775 455
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
.+.+++...+.. +.+ ..++.+.|. +.|+.+.....+. ...+++|+++. . ++++|+++++.|+
T Consensus 317 ~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~--~~~~i~~~l~~l~ 380 (389)
T 1gd9_A 317 GAFYIFPRIRDT--GLT-----------SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA-T--AYEKLEEAMDRME 380 (389)
T ss_dssp BTTEECCBCGGG--TCC-----------HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC-S--CHHHHHHHHHHHH
T ss_pred eeeEEEEeccCC--CCC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHHH
Confidence 454443222210 000 245677787 6775443322111 11469999943 2 8999999999999
Q ss_pred Hhhcc
Q psy12303 475 RLGHD 479 (480)
Q Consensus 475 ~~~~~ 479 (480)
+++++
T Consensus 381 ~~~~~ 385 (389)
T 1gd9_A 381 RVLKE 385 (389)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87754
No 52
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.95 E-value=4e-27 Score=233.71 Aligned_cols=312 Identities=12% Similarity=0.069 Sum_probs=217.4
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCC--C-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQ--G-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~--~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.|....+..++.+++.+++++++|.+ + .++++|+|||+|+..++.++.. ||+ .|+++..+|.
T Consensus 73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------------~gd-~vl~~~~~~~ 137 (407)
T 3nra_A 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVA--------------RGD-KVAIVQPDYF 137 (407)
T ss_dssp HSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCC--------------TTC-EEEEEESCCT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCC--------------CCC-EEEEcCCccc
Confidence 34445566789999999999999984 2 6899999999999998876643 445 7888999999
Q ss_pred hHHHHHHHcCCCCCCeEEeeC------CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPS------DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC 250 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~------~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~ 250 (480)
++..+++..|. +++.+|. ++++.+|+++|++++++. +++|++++++|++|.+.| +++|.++|
T Consensus 138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 208 (407)
T 3nra_A 138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALA 208 (407)
T ss_dssp HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence 99999999998 8889998 367889999999999864 789999999999999988 99999999
Q ss_pred HHcCcEEEeeccccccccccccccC-cccC-CCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRH-PRLT-GIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~-~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++||+++|+|++|+.+.+....... ..+. ...+.++++.|++|+++ .+.++|+++. ++.+..........+...
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~-- 285 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIARMEKLQAIVSLR-- 285 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSS--
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccC--
Confidence 9999999999999986653211110 0011 11245688889999998 4467888876 444443322111111000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
...+..++....+ +.+.+++..++..++++++.+.|++ +++++++ .+..+.+++...
T Consensus 286 -------------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~~~~~~~~~~ 344 (407)
T 3nra_A 286 -------------------AAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRG-CEGVFAR-TPQAGSYLFPRL 344 (407)
T ss_dssp -------------------SCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHT-STTCBCC-CCSBSSEECCBC
T ss_pred -------------------CChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-CCCceec-cCCeeEEEEEeC
Confidence 1122222222222 2355778888899999999999999 8898875 444444443222
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.. +.+ ..++.+.|.++ |+. +.++...+ ..+++|+++. +++++|++++++|++++++
T Consensus 345 ~~~--~~~-----------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 345 PKL--AVA-----------PAEFVKILRLQAGVV-VTPGTEFSPHTADSVRLNFS---QDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp CCB--SSC-----------HHHHHHHHHHHHCEE-CEEGGGTCTTCTTBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCC-----------HHHHHHHHHHhCCEE-EeCchhhCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 221 000 23566777654 744 43322211 2579999943 3899999999999988764
No 53
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.1e-26 Score=229.13 Aligned_cols=321 Identities=11% Similarity=0.073 Sum_probs=223.7
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+......|...++..++++++.+++.+.+|. +++++++|+|||+|+..++.++.. |
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~--------------~ 124 (389)
T 1o4s_A 59 VVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLD--------------P 124 (389)
T ss_dssp HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCC--------------T
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCC--------------C
Confidence 335555544433334544456788999999999888886 557899999999999999988743 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
|+ .|+++..+|+++..++...|. +++.+|.++ ++.+|+++|+++++++ +++|++++++|++|.+.|
T Consensus 125 gd-~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~ 194 (389)
T 1o4s_A 125 GD-EVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVYRRE 194 (389)
T ss_dssp TC-EEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHH
T ss_pred CC-EEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCCCHH
Confidence 45 788888999999999999888 788899875 5789999999988754 889999999999999977
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|++||+++++|++|+.+....+......+.+..+.|+++.|+||+++.| .++|+++++ ++..........
T Consensus 195 ~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~-~~~~~~l~~~~~ 273 (389)
T 1o4s_A 195 FLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISS-EKVATAVSKIQS 273 (389)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeC-HHHHHHHHHHhh
Confidence 99999999999999999999998765221100001222236799999999999733 458988874 444433221110
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEE
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNV 400 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v 400 (480)
.+. .....+..+++...+.. ++++..++..++++++.+.|++ . |++++ .|..+.+
T Consensus 274 ~~~---------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~ 328 (389)
T 1o4s_A 274 HTT---------------------SCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKK-M-GVKFV-EPEGAFY 328 (389)
T ss_dssp HHT---------------------CSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHH-T-TCCCC-CCSBSSE
T ss_pred hcc---------------------cCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh-c-CCeee-cCCcceE
Confidence 000 00123344444444432 2677788889999999999999 5 88775 4555555
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++...+ .. ..++.+.|. +.|+.+.....+.. .+++|+++. +++++|+++++.|++++++
T Consensus 329 ~~~~~~--~~--------------~~~l~~~l~~~~gi~v~~g~~f~~-~~~~Ris~~---~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 329 LFFKVR--GD--------------DVKFCERLLEEKKVALVPGSAFLK-PGFVRLSFA---TSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp EEEECS--SC--------------HHHHHHHHHHHHCEECEEGGGGTC-TTEEEEECC---SCHHHHHHHHHHHHHHHTC
T ss_pred EEEeCC--CC--------------HHHHHHHHHHHCCEEEeCchhcCC-CCeEEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 443222 11 235667776 67754433222222 469999943 3899999999999988754
No 54
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.95 E-value=1.8e-26 Score=230.14 Aligned_cols=330 Identities=13% Similarity=0.085 Sum_probs=224.5
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|... ..++++++++++++.+| .+++++++|+|+++|+..++++++.
T Consensus 76 ~~~v~-~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~----------- 141 (421)
T 3l8a_A 76 VPEIK-EAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE----------- 141 (421)
T ss_dssp CHHHH-HHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC-----------
T ss_pred CHHHH-HHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC-----------
Confidence 34444 44444443333344322 37888899999999999 4567899999999999999998754
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC-C--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD-K--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~-~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
+|+ .|++....|+++..++...|. +++.+|.+ . ++.+|+++|++++++. ++++|++++++|++|.
T Consensus 142 ---~gd-~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~ 209 (421)
T 3l8a_A 142 ---KGD-AVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGR 209 (421)
T ss_dssp ---TEE-EEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTB
T ss_pred ---CCC-EEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCC
Confidence 334 788888999999999999887 78888875 2 3478999999999842 2899999999999999
Q ss_pred c---cChHHHHHHHHHcCcEEEeeccccccccccccccC-c-ccCCCCCCccceeCccccCC-CcccceEEEEeCchhhH
Q psy12303 240 F---DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-P-RLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLI 313 (480)
Q Consensus 240 ~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~ 313 (480)
+ +++++|.++|++||+++|+|++|+++......... . ......+.++++.+++|+++ .+.++|+++++++++..
T Consensus 210 ~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~ 289 (421)
T 3l8a_A 210 VWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRR 289 (421)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHH
Confidence 8 67999999999999999999999986653221111 0 00111244577889999997 44678999987665554
Q ss_pred hhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 314 SCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 314 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
........+.. ..+..+...++..++.. +.+.++++.++..++++++.+.|++ .|+++++
T Consensus 290 ~~~~~~~~~~~-----------------~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~i~~~- 349 (421)
T 3l8a_A 290 KFQYRQLANNQ-----------------HEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEA-KTKIKVM- 349 (421)
T ss_dssp HHHHHHHHTTC-----------------SCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEE-
T ss_pred HHHHHHHhccc-----------------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHh-CCCceEe-
Confidence 33211100000 00111122233333432 5667888899999999999999999 6899986
Q ss_pred CCceeEEE-EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCc--ccEEEEecccCCCCHHHHHHH
Q psy12303 394 EPEMVNVS-FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDL--PNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 394 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di~~~ 469 (480)
.+..+.+. +.+...... ..++.+.|.++ | +.+.++...+. .+++|++ +. +++++|+++
T Consensus 350 ~~~~~~~~~v~~~~~~~~--------------~~~l~~~l~~~~g-i~v~~g~~f~~~~~~~iRi~-~~--~~~~~i~~~ 411 (421)
T 3l8a_A 350 EPEGTYLVWLDFSAYAIA--------------QPQLSEKLQNEAK-VVLNDGAHFGKEGKYFARLN-VA--TPKNTVQEA 411 (421)
T ss_dssp CCSBSSEEEEECGGGTCC--------------TTHHHHHHHHTTC-EECEEGGGGCGGGTTEEEEE-CC--SCHHHHHHH
T ss_pred CCCeeEEEEEeccccCCC--------------HHHHHHHHHHhCC-EEEECchhhCCCCCCEEEEE-ec--CCHHHHHHH
Confidence 45555555 332211111 13566777654 6 44443222221 5799999 43 589999999
Q ss_pred HHHHHHhhc
Q psy12303 470 LTEMDRLGH 478 (480)
Q Consensus 470 ~~~l~~~~~ 478 (480)
+++|+++++
T Consensus 412 l~~l~~~l~ 420 (421)
T 3l8a_A 412 LSRIISVFG 420 (421)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHh
Confidence 999998865
No 55
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=229.89 Aligned_cols=347 Identities=13% Similarity=-0.024 Sum_probs=230.6
Q ss_pred CccccccCCCChHHhHHHHHHHHcCc--CC-cc---hhcChhhHHHHHHHHHHHHHHhCCCC-CCeEE-CCChhHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANT--NM-FT---YEIAPVFILMETVVLEKMRQIIGWQG-GDSIL-APGGSISNLYA 145 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~-~~---~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~-t~ggt~a~~~a 145 (480)
.-+|.+++.+.|+.++..+...+.+. ++ .. ...++.+.++.+++++.+++++|+++ .+++| |+|||+|+..+
T Consensus 14 ~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 14 GTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp -CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHH
Confidence 45777888888888886555444321 11 11 12345677788889999999999975 57888 68999999999
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
+...... .+|+ .+++....|++. +.++.+...+..++.++.+.++..++++++.+++++ +
T Consensus 94 ~~~l~~~------------~~Gd-~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~------t 153 (377)
T 3e77_A 94 PLNLIGL------------KAGR-CADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPD------A 153 (377)
T ss_dssp HHHHGGG------------STTC-EEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTT------C
T ss_pred HHhccCC------------CCCC-eEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCC------c
Confidence 8876531 0245 555555667664 334444221225666788767677777776666554 8
Q ss_pred EEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEE
Q psy12303 226 FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIH 305 (480)
Q Consensus 226 ~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~ 305 (480)
++|.+++.+|.+|.+.|+ +|+++|+++|||++++.+..+++..++ + ++++++|||++ |.|+|+++
T Consensus 154 ~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~-------~--~~~~s~~K~~g-p~G~g~l~ 218 (377)
T 3e77_A 154 SYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKF-------G--VIFAGAQKNVG-SAGVTVVI 218 (377)
T ss_dssp SCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGC-------S--EEEEEGGGTTS-CTTCEEEE
T ss_pred cEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhc-------C--EEEEecccccC-CCccEEEE
Confidence 899999999999999998 478899999999999999998887655 3 58899999995 99999999
Q ss_pred EeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHh
Q psy12303 306 FKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIK 383 (480)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~ 383 (480)
++++.+ .......+.|+...... +.+ ....+-+ ....++..+++.+-.+ |++++.++..++++++.+.|+
T Consensus 219 ~~~~~l-~~~~~~~p~~~~~~~~~-----~~~--~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~ 290 (377)
T 3e77_A 219 VRDDLL-GFALRECPSVLEYKVQA-----GNS--SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIID 290 (377)
T ss_dssp EETTSC-SCCCTTSCGGGCHHHHH-----TTT--TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcHHHH-hhccCCCCchhhHHHHh-----hcC--CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 987642 22222222232100000 000 0001111 1344555666666566 899999999999999999999
Q ss_pred cCCCCeEEec-CC--cee-EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccC
Q psy12303 384 SMPDKFYLIL-EP--EMV-NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSA 459 (480)
Q Consensus 384 ~~~~g~~~~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~ 459 (480)
+ ++|+.+.. ++ .+. +++|.+.... .. .+ + ...+...+.+.|+. +.. .... .+.+|+| ++.
T Consensus 291 ~-~~g~~~~~~~~~~rs~~ivsf~~~~~~--~~--~~----~---~~~~l~~l~~~Gi~-~~~-g~~~-~g~iRiS-~~~ 354 (377)
T 3e77_A 291 N-SQGFYVCPVEPQNRSKMNIPFRIGNAK--GD--DA----L---EKRFLDKALELNML-SLK-GHRS-VGGIRAS-LYN 354 (377)
T ss_dssp T-STTSEECCSCGGGBCSSEEEEEESSTT--CC--HH----H---HHHHHHHHHHTTEE-SCB-CCTT-TCSEEEE-CCT
T ss_pred h-cCCceecCCCHHHcCCcEEEEEcCCCC--Cc--hh----H---HHHHHHHHHHCCcE-EeC-CCCc-CCEEEEE-CCC
Confidence 9 88998642 22 233 4777643211 00 00 1 12355666677743 222 2222 3579999 788
Q ss_pred CCCHHHHHHHHHHHHHhhcc
Q psy12303 460 AVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~~~~~ 479 (480)
++|++||+++++.|+++.++
T Consensus 355 ~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 355 AVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998753
No 56
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=6.4e-27 Score=229.99 Aligned_cols=321 Identities=12% Similarity=0.059 Sum_probs=213.6
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH--HH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR--SC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~--~~ 184 (480)
++.+.++.+++++.+++++|.+ ..++||+|||+|+..++..+ . ||+ .|+++...|++.. ..
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-~--------------~gd-~vi~~~~~~~~~~~~~~ 92 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-T--------------IDE-DCLIIRNGWFSYRWTQI 92 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-C--------------TTC-EEEEEECSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-C--------------CCC-eEEEEeCCchhHHHHHH
Confidence 5666788888999999999997 57889999999999877433 1 445 6666667776643 34
Q ss_pred HHHcCCCCCCeEEeeCCCC---------CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 185 AAVCGLGTDNCVEVPSDKR---------GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~~---------~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
+...|.+. +++.++.+.. +.+|+++|++++++. ++++|++++++|++|.+.| +++|.++|++
T Consensus 93 ~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~ 166 (379)
T 3ke3_A 93 LEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHS 166 (379)
T ss_dssp HHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHH
T ss_pred HHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHH
Confidence 45556532 5677776431 268999999999653 1788999999999999999 9999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc-CCccccccccccc-
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ-MSAEYLFMQDKLY- 330 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~l~~~~~~~- 330 (480)
||+++|+|++++ +..+.+...+ ++|++++++||++++|.|+|++++++. ..+.... ...++........
T Consensus 167 ~~~~li~D~~~~-g~~~~~~~~~-------~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 237 (379)
T 3ke3_A 167 VGGLLVIDCIAS-GCVWLDMKEL-------GIDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVESTESNCFSLDLKQWLT 237 (379)
T ss_dssp TTCEEEEECTTC-TTCCCCHHHH-------TCSEEEECTTTTTCSCCCEEEEEECHH-HHHHHHTCCCSCSTTCHHHHHH
T ss_pred cCCEEEEEeccc-CCcccccccc-------CCCEEEecchhhcCCCCceEEEEECHH-HHHhhhcCCCCceeecHHHHHH
Confidence 999999999998 6555544444 789999999999999999999987654 4343332 1222221100000
Q ss_pred -CcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc--eeEEEEEeec
Q psy12303 331 -DVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE--MVNVSFWYLP 406 (480)
Q Consensus 331 -~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~--~~~v~f~~~~ 406 (480)
...+..+...+..+... ...++..++..+..++++++.++..++++++++.|++ + |++++.++. ...+.....+
T Consensus 238 ~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~-g~~~~~~~~~~~~~i~~~~~~ 315 (379)
T 3ke3_A 238 IMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTD-K-GIESVAAEGFEAPGVVVSYTE 315 (379)
T ss_dssp HHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-T-TCCBSBCTTCBCSSEEEEECS
T ss_pred HHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCEecCCccccCceEEEEccC
Confidence 00000111111111111 2233445566655667889999999999999999999 4 888765442 3333322211
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-----CCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-----NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-----~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.. + ....+.|.+.|+.+ ..+.. ....+.+|++ ++.++|++||++++++|++++++
T Consensus 316 -~~------~---------~~~~~~L~~~Gi~v-~~g~~~~~~~~~~~~~lRis-~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 316 -RD------D---------MHKGSAFAEAGLQI-AAGVPLKVGEPDNFKTFRLG-LFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp -CH------H---------HHSSHHHHHTTCCC-EECCCCSSCCCTTCCEEEEE-CCSHHHHTCHHHHHHHHHHHHHH
T ss_pred -Cc------c---------hHHHHHHHHCCeEE-eCCccccccccCcCCEEEEe-CCcCCCHHHHHHHHHHHHHHHHH
Confidence 10 0 01135566777543 33211 0114799999 77788999999999999988764
No 57
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.95 E-value=1.5e-25 Score=218.90 Aligned_cols=289 Identities=11% Similarity=0.043 Sum_probs=210.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.+++++++|+|||+|+..++.++.. ||+ .|+++..+|+++...+...|. +
T Consensus 70 ~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~--------------~gd-~vl~~~~~~~~~~~~~~~~g~---~ 131 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLD--------------TTT-NTVMATPTFVQYRQNALIEGA---E 131 (363)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCS--------------TTC-EEEEEESSCHHHHHHHHHHTC---E
T ss_pred HHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHcc--------------CCC-EEEEcCCChHHHHHHHHHcCC---E
Confidence 4567789999999878999999999999999987743 445 788888999999999999998 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEeecccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~vD~a~~~~~~~~~~ 272 (480)
++.+|.++++.+|+++|+++++++ +++|++++++|++|.+.|++++.++++.+ |+++|+|++|+.+.. ...
T Consensus 132 ~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~~ 204 (363)
T 3ffh_A 132 VREIPLLQDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-PQP 204 (363)
T ss_dssp EEEEECCTTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-SCC
T ss_pred EEEecCCCCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-ccc
Confidence 899999888999999999999754 89999999999999999999999999988 999999999997654 111
Q ss_pred ccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
...-......+.++++.+++|+++ .+.++|++++ +++...........|- ...+.
T Consensus 205 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~-----------------------~~~~~ 260 (363)
T 3ffh_A 205 EKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA-DKEIIRQLNIVRPPFN-----------------------TTSIG 260 (363)
T ss_dssp CCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHHHTCCSCC-----------------------CBHHH
T ss_pred cCHHHHhhcCCCEEEEeechhhhcCchhceeeeec-CHHHHHHHHHhCCCCC-----------------------CCHHH
Confidence 000011111234466788999997 4456699887 5555544332221110 12333
Q ss_pred HHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 352 LWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 352 ~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
.+++...+ ..+.+++..++..++++++.+.|++ +++++++ ++....+.+.+ +.. ..++.+
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~-~~~~~~~~~~~-~~~----------------~~~~~~ 321 (363)
T 3ffh_A 261 QKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR-FEKVKLY-PANGNFVLIDL-GIE----------------AGTIFS 321 (363)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEC-CCCSSEEEEEC-SSC----------------HHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-CCCceEC-CCCCeEEEEEC-CCC----------------HHHHHH
Confidence 33333333 2366788889999999999999999 8899985 45554444432 111 245678
Q ss_pred HHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 431 RMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.|.++|+. +.++...+..+++|++ ++ +++|+++++++|+++
T Consensus 322 ~l~~~gi~-v~~g~~~~~~~~iRis-~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 322 YLEKNGYI-TRSGAALGFPTAVRIT-IG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHTTEE-CEETTTTTCTTEEEEE-CC---CHHHHHHHHHHHHHH
T ss_pred HHHHCCeE-EEeCccCCCCCeEEEE-CC---CHHHHHHHHHHHHHh
Confidence 88888844 4433322335799999 43 899999999999876
No 58
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=4e-26 Score=225.20 Aligned_cols=327 Identities=11% Similarity=0.088 Sum_probs=222.7
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|.. ...++++++++++++++| .++.++++|+|||+|+..++.++..
T Consensus 47 ~~~v~-~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~----------- 112 (391)
T 4dq6_A 47 APCII-DSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTK----------- 112 (391)
T ss_dssp CHHHH-HHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC-----------
T ss_pred CHHHH-HHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCC-----------
Confidence 34444 5555555443344432 347888999999999999 5667899999999999999988753
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--C--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--K--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLG 238 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G 238 (480)
||+ .|+++..+|.++..++...|. +++.+|.+ . ++.+|+++|++++++ +++|++++++|++|
T Consensus 113 ---~gd-~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG 178 (391)
T 4dq6_A 113 ---AND-KIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVG 178 (391)
T ss_dssp ---TTC-EEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTT
T ss_pred ---CCC-EEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCC
Confidence 445 788999999999999999988 88889887 3 346899999998864 78999999999999
Q ss_pred cc---cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC----CCCccceeCccccCC-CcccceEEEEeCch
Q psy12303 239 AF---DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI----ERADSVTWNPHKLMG-TLLQCSTIHFKQDG 310 (480)
Q Consensus 239 ~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~----~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~ 310 (480)
.+ +++++|.++|++||+++|+|++|+.+........ .+..+ ....+++.|+||+++ .+.++|+++++++.
T Consensus 179 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 256 (391)
T 4dq6_A 179 RVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHI--PMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK 256 (391)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC--CGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCcc--CHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence 99 6689999999999999999999988654321110 11111 022367889999997 44678998877655
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
+..........+... ........++..++.. +.+.+++..++..++++++.+.|++++|+++
T Consensus 257 ~~~~~~~~~~~~~~~-----------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (391)
T 4dq6_A 257 DYKLLDDAFTRIDIK-----------------RNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK 318 (391)
T ss_dssp HHHHHHHHHHHTTCC-----------------CCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHhhcCC-----------------CCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 444332111000000 0000112222333332 4556788889999999999999986247998
Q ss_pred EecCCceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC-cccEEEEecccCCCCHHHHH
Q psy12303 391 LILEPEMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND-LPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 391 ~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~ 467 (480)
++ .+..+.+.+...+. ... ..++.++|.++ |+.+.....+.. ..+++|+++ . +++++|+
T Consensus 319 ~~-~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~-~--~~~~~i~ 380 (391)
T 4dq6_A 319 VR-KPEGTYLLWVDFSALGLS--------------DEELESILVQKGKVALNQGNSFGIGGSGYQRINL-A--CPRSMLE 380 (391)
T ss_dssp EC-CCSBSSEEEEECGGGCCC--------------HHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEEC-C--SCHHHHH
T ss_pred ec-CCCccEEEEEEhhhcCCC--------------HHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEE-c--CCHHHHH
Confidence 85 45555555322221 111 24677888888 744433222211 147999994 3 6899999
Q ss_pred HHHHHHHHhh
Q psy12303 468 FLLTEMDRLG 477 (480)
Q Consensus 468 ~~~~~l~~~~ 477 (480)
+++++|++++
T Consensus 381 ~~l~~l~~~l 390 (391)
T 4dq6_A 381 EALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 59
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.95 E-value=5.3e-26 Score=223.73 Aligned_cols=327 Identities=11% Similarity=0.049 Sum_probs=221.7
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|... ..++++++++++++.+| .++.++++|+|||+|+..++.++.+
T Consensus 39 ~~~v~-~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~----------- 104 (383)
T 3kax_A 39 PQPIQ-TALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTK----------- 104 (383)
T ss_dssp CHHHH-HHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCC-----------
T ss_pred CHHHH-HHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCC-----------
Confidence 34444 44444444333344322 56788899999999999 5667899999999999999988743
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC---CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR---GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~---~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
||+ .|+++..+|.++...+...|. +++.+|.+.+ +.+|+++|+++++++ +++|++++++|++|.
T Consensus 105 ---~gd-~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~ 171 (383)
T 3kax_A 105 ---ENE-SVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGR 171 (383)
T ss_dssp ---TTC-EEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTB
T ss_pred ---CCC-EEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCc
Confidence 445 788999999999999999988 7888888642 459999999999443 889999999999999
Q ss_pred ccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCC---CCCccceeCccccCC-CcccceEEEEeCchhh
Q psy12303 240 FDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGI---ERADSVTWNPHKLMG-TLLQCSTIHFKQDGLL 312 (480)
Q Consensus 240 ~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~ 312 (480)
+.| +++|.++|++||+++|+|++|+.+......... ..... .+.++++.|+||+++ .+.++|++++.++...
T Consensus 172 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 250 (383)
T 3kax_A 172 VWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTP-FASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLR 250 (383)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcee-HhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHH
Confidence 977 566666699999999999999886643211111 11100 134577889999998 4467888887666554
Q ss_pred HhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 313 ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
.........+.. .....+..+++...+ +.+.++++.++..++++++.+.|++++|+++
T Consensus 251 ~~~~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 251 QAFTSIQYRQGF--------------------HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp HHHHHHHHHTTC--------------------CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHhhccc--------------------CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 433211111000 002233333333333 4566788889999999999999986347998
Q ss_pred EecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC--cccEEEEecccCCCCHHHHH
Q psy12303 391 LILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 391 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~ 467 (480)
++ .+..+.+.+...+.. +.+ ..++.+.|. +.|+. +.++...+ ..+++|+++. +++++|+
T Consensus 311 ~~-~~~~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~iRi~~~---~~~~~i~ 372 (383)
T 3kax_A 311 VM-KPEGSFLLWIDCSAL--NLS-----------QDERTKLLEEKGKII-VEPGEKYGLGGEEHIGINIG---CPRSVLE 372 (383)
T ss_dssp EC-CCSBSSEEEEECGGG--CCC-----------HHHHHHHHHHTSCEE-CEESGGGCTTCTTEEEEECS---SCHHHHH
T ss_pred Ee-cCCceEEEEEEcccc--CCC-----------HHHHHHHHHhhCCEE-eECchhhcCCCCCeEEEEEc---CCHHHHH
Confidence 85 555555553322211 000 246777887 56744 44322211 1479999943 5899999
Q ss_pred HHHHHHHHhh
Q psy12303 468 FLLTEMDRLG 477 (480)
Q Consensus 468 ~~~~~l~~~~ 477 (480)
+++++|++++
T Consensus 373 ~~l~~l~~~l 382 (383)
T 3kax_A 373 EILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 60
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.7e-26 Score=229.32 Aligned_cols=319 Identities=12% Similarity=0.098 Sum_probs=222.9
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ 168 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~ 168 (480)
+.+ ..+......|...++..++++.+.+++.+.+|. ++.++++|+|||+|+..++.++.. ||+
T Consensus 63 ~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~--------------~gd 127 (409)
T 2gb3_A 63 ERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIAN--------------PGD 127 (409)
T ss_dssp HHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC
T ss_pred HHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCC--------------CCC
Confidence 555 555443344554556788999989998887774 457899999999999999988743 445
Q ss_pred eEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc---Ch
Q psy12303 169 LVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PI 243 (480)
Q Consensus 169 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l 243 (480)
.|+++..+|+++..++...|. +++.+|.++ ++.+ +++|+++++++ +++|++++++|++|.+. ++
T Consensus 128 -~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l 196 (409)
T 2gb3_A 128 -EILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYGKDEM 196 (409)
T ss_dssp -EEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred -EEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcCHHHH
Confidence 788888999999999999988 788999875 4455 88898888653 89999999999999985 48
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++|.++|++||+++|+|++|+.+...... .. .+.+..+.|+++.|+||+++.| ..+|+++++++++..........+
T Consensus 197 ~~i~~~~~~~~~~li~Dea~~~~~~~~~~-~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~ 274 (409)
T 2gb3_A 197 RYLVEIAERHGLFLIVDEVYSEIVFRGEF-AS-ALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGR 274 (409)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSCC-CC-GGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCEEEEECcccccccCCCC-CC-ccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhcc
Confidence 99999999999999999999987643211 11 2233346799999999999743 458999877634444322111000
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNV 400 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v 400 (480)
. ....+..+++...+ +.+.++++.++..++++++.+.|++ . +++++..|..+.+
T Consensus 275 ~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~ 330 (409)
T 2gb3_A 275 L----------------------APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE-H-GLKRFTKPSGAFY 330 (409)
T ss_dssp C----------------------CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCBCCCSBSSE
T ss_pred C----------------------CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH-c-CceeeeCCCeeEE
Confidence 0 01222333333333 5677888889999999999999999 5 8877234555555
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc------ccEEEeeeeeC----CcccEEEEecccCCCCHHHHHHHH
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA------GTMMVGYQPLN----DLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~------g~~~~~~~~~~----~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
++...+ . .+ ..++.+.|.++ |+.+.....+. ...+++|++ +. +++++|++++
T Consensus 331 ~~~~~~-~---~~-----------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis-~~--~~~e~i~~~~ 392 (409)
T 2gb3_A 331 ITAELP-V---ED-----------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA-CV--LEKDLLSRAI 392 (409)
T ss_dssp EEEECS-S---SC-----------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEE-CC--SCHHHHHHHH
T ss_pred EEEEeC-C---CC-----------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEE-eC--CCHHHHHHHH
Confidence 553332 1 11 23566777776 74443322221 115799999 44 7999999999
Q ss_pred HHHHHhhcc
Q psy12303 471 TEMDRLGHD 479 (480)
Q Consensus 471 ~~l~~~~~~ 479 (480)
++|++++++
T Consensus 393 ~~l~~~l~~ 401 (409)
T 2gb3_A 393 DVLMEGLKM 401 (409)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 61
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=2.6e-26 Score=227.85 Aligned_cols=323 Identities=11% Similarity=0.054 Sum_probs=220.3
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ 168 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~ 168 (480)
+.+...+......|...++..++++.+.+++.+.+|. ++.++++|+|||+|+..++.++.. ||+
T Consensus 61 ~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~--------------~gd 126 (406)
T 1xi9_A 61 EAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLD--------------PGD 126 (406)
T ss_dssp HHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC
T ss_pred HHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCC--------------CCC
Confidence 4444333322234544455678999999999888775 457899999999999999988743 445
Q ss_pred eEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---h
Q psy12303 169 LVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---I 243 (480)
Q Consensus 169 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l 243 (480)
.|+++..+|+++..++...|. +++.+|.++ ++.+|+++|+++++++ +++|++++++|++|.+.| +
T Consensus 127 -~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l 196 (406)
T 1xi9_A 127 -EILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDKKTL 196 (406)
T ss_dssp -EEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred -EEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCHHHH
Confidence 788889999999999999888 788888874 4678999999998754 889999999999999866 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCC-ccceeCccccCCCc-ccceEEEE-eCc----hhhHhhh
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERA-DSVTWNPHKLMGTL-LQCSTIHF-KQD----GLLISCN 316 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~-D~~~~s~hK~~~~p-~~~g~~~~-~~~----~~~~~~~ 316 (480)
++|.++|++||+++|+|++|+.+....+......+. .+. |+++.|+||+++.| ..+|++++ .++ ++.....
T Consensus 197 ~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~ 274 (406)
T 1xi9_A 197 EEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAID 274 (406)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHH
Confidence 999999999999999999999876511110000111 255 78888999999743 45888883 333 4443322
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE 394 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~ 394 (480)
... .+... ...+..++....+ +.++++++.++..++++++.+.|++ .|+++++ .
T Consensus 275 ~~~-~~~~~---------------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~ 330 (406)
T 1xi9_A 275 RLA-RIRLC---------------------PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE-IPGISTT-K 330 (406)
T ss_dssp HHH-HHTCC---------------------SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT-STTEECC-C
T ss_pred HHH-HhhcC---------------------CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh-CCCCeee-c
Confidence 110 00000 1122222222222 3455788889999999999999999 8899875 4
Q ss_pred CceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCc--ccEEEEecccCCCCHHHHHHHHH
Q psy12303 395 PEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDL--PNFFRNIISSAAVTEGDIDFLLT 471 (480)
Q Consensus 395 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~--~~~~R~~~~~~~~t~~di~~~~~ 471 (480)
|..+.++|...+... +.+ ..++.+.|. +.|+.+ .++...+. .+++|++ +. +++++|+++++
T Consensus 331 ~~~~~~~~~~~~~~~-~~~-----------~~~l~~~l~~~~gi~v-~~g~~f~~~~~~~lRis-~~--~~~~~i~~~~~ 394 (406)
T 1xi9_A 331 PQGAFYIFPKIEVGP-WKN-----------DKEFVLDVLHNAHVLF-VHGSGFGEYGAGHFRAV-FL--PPIEILEEAMD 394 (406)
T ss_dssp CCBSSEECCEECSCS-CSS-----------HHHHHHHHHHHHCEEC-EEGGGGCGGGTTBEEEE-CC--SCHHHHHHHHH
T ss_pred CCeeEEEEEecCccC-CCC-----------HHHHHHHHHHhCCEEE-eCchhcCCCCCCEEEEE-ec--CCHHHHHHHHH
Confidence 555555542222210 110 235667776 677444 33222221 4699999 44 79999999999
Q ss_pred HHHHhhcc
Q psy12303 472 EMDRLGHD 479 (480)
Q Consensus 472 ~l~~~~~~ 479 (480)
+|++++++
T Consensus 395 ~l~~~l~~ 402 (406)
T 1xi9_A 395 RFEKFMKE 402 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 62
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.95 E-value=1.6e-25 Score=224.70 Aligned_cols=317 Identities=13% Similarity=0.155 Sum_probs=216.1
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV 181 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~ 181 (480)
.|....+..++++.+.+++.+.+|. ++.++++|+|+|+|+..++.++.+ ||+ .|++..++|+++
T Consensus 113 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~--------------~Gd-~Vlv~~p~y~~~ 177 (448)
T 3aow_A 113 QYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLN--------------PGD-IVVVEAPTYLAA 177 (448)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEEESCCHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcC--------------CCC-EEEEeCCChHHH
Confidence 4444455678888888888777798 667899999999999999988754 445 788888999999
Q ss_pred HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE-EeccCCCccccccC---hHHHHHHHHHcCcEE
Q psy12303 182 RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV-NCTSGTTVLGAFDP---IEEIADICQKYNMWL 257 (480)
Q Consensus 182 ~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l 257 (480)
..++...|. +++.+|.++++ +|+++|+++++....++.++++| ++++++||+|.+.+ +++|.++|++||+++
T Consensus 178 ~~~~~~~g~---~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~l 253 (448)
T 3aow_A 178 LQAFNFYEP---QYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIV 253 (448)
T ss_dssp HHHHHTTCC---EEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHcCC---EEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEE
Confidence 999998887 78889987765 99999999997322222348887 67899999999976 578999999999999
Q ss_pred EeeccccccccccccccCcccCC--CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
++|++|+.+.+...... .+.. ..+.++.+.+++|+++.+..+|+++++ +.+..........+..
T Consensus 254 I~De~y~~~~~~g~~~~--~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~-~~l~~~l~~~~~~~~~----------- 319 (448)
T 3aow_A 254 VEDDPYGELRYSGNPEK--KIKALDNEGRVIYLGTFSKILAPGFRIGWMVGD-PGIIRKMEIAKQSTDL----------- 319 (448)
T ss_dssp EEECSCTTCBCSSCCCC--CTGGGCTTSCEEEEEESTTTTCGGGCCEEEEEC-HHHHHHHHHHHHHHHS-----------
T ss_pred EEECCCccccCCCCCCc--CHHhcCCCCCEEEEccchhhccccccEEEEEeC-HHHHHHHHHHHHHhcC-----------
Confidence 99999998765221110 1111 124567788999999844568999875 4444433211111000
Q ss_pred CCCccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecCCceeEEEEEeecCccC
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAK--G--DEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~--g--~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~~~~~~v~f~~~~~~~~ 410 (480)
+ ...+..+++...+ + .+.++++.++..++++++.+.|+++.| ++++. .|..+++++...+....
T Consensus 320 -------~---~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~-~p~~g~~~~v~~~~~~~ 388 (448)
T 3aow_A 320 -------C---TNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWT-KPEGGMFIWVTLPDGID 388 (448)
T ss_dssp -------S---CCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEC-CCSBSSEEEEECSTTCC
T ss_pred -------C---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-CCCccEEEEEEcCCCCC
Confidence 0 1122222222222 2 345677777888899999999986246 68875 45555555433332211
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.++|.++|+.+.....+. ...+++|+++. . .++++|++++++|.+++++
T Consensus 389 --------------~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~-~-~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 389 --------------SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFT-Y-VDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp --------------HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECS-S-SCTHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeC-C-CCHHHHHHHHHHHHHHHHH
Confidence 2456788888885544432221 11579999944 3 3899999999999987653
No 63
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=3.8e-26 Score=226.01 Aligned_cols=303 Identities=16% Similarity=0.139 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++++++++++|.+. .+++++||+|+..++.++.+ ||+ .|+++..+|+++..+++..|.
T Consensus 87 ~~~~~~l~~~la~~~~~~~--~i~~~sGt~a~~~~l~~~~~--------------~gd-~v~~~~~~~~~~~~~~~~~g~ 149 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD--TILYSSCFDANGGLFETLLG--------------PED-AIISDELNHASIIDGIRLCKA 149 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHTTHHHHCC--------------TTC-EEEEETTCCHHHHHHHHSCCS
T ss_pred chHHHHHHHHHHHHHCCCc--EEEECchHHHHHHHHHHhcC--------------CCC-EEEECCcccHHHHHHHHHcCC
Confidence 4556678888999999874 66666779999988877643 445 889999999999999999887
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
+++.+|. +|+++|++++++...++.++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....
T Consensus 150 ---~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~ 221 (399)
T 3tqx_A 150 ---QRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGE 221 (399)
T ss_dssp ---EEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSST
T ss_pred ---ceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCC
Confidence 7788876 47889999998876555569999999999999999999999999999999999999997544321
Q ss_pred ccccCcccCC-CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 271 KKYRHPRLTG-IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 271 ~~~~~~~~~~-~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.........+ ....|+++.++||+++++.+ |+++. +++...........|.... ....
T Consensus 222 ~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~-~~~~~~~~~~~~~~~~~~~-------------------~~~~ 280 (399)
T 3tqx_A 222 NGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSG-HKEIIEWLRNRSRPYLFSN-------------------TVAP 280 (399)
T ss_dssp TSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEE-CHHHHHHHHHHCHHHHSSC-------------------CCCH
T ss_pred CCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEc-CHHHHHHHHHhCcceeccC-------------------CCcH
Confidence 1100001112 23679999999999995444 77665 4555544332222221110 0122
Q ss_pred h---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 350 F---KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 350 l---~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
+ ++..+++.+. ++.+++.++..++++++.+.|++ . |+++. ++..+.+.+.+. .. . ...
T Consensus 281 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~-~~------------~--~~~ 341 (399)
T 3tqx_A 281 VIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEK-L-GFQLV-PGNHPIIPVMLG-DA------------Q--LAT 341 (399)
T ss_dssp HHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCSSSEEEEEEE-CH------------H--HHH
T ss_pred HHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH-c-CCCcC-CCCCCEEEEEeC-CH------------H--HHH
Confidence 2 3333333322 55788889999999999999999 4 88775 566666655432 11 0 024
Q ss_pred HHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 427 ILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
++.+.|.++|+.+ .+.... ...+++|++ ++..++++|+++++++|+++++++
T Consensus 342 ~~~~~l~~~gi~v-~~~~~~~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 342 NMADHLLQEGIYV-VGFSYPVVPMGKARIRVQ-MSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHHHTTEEC-CEECTTTSCTTCEEEEEE-CCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEE-eeeCCCCCCCCCceEEEE-eecCCCHHHHHHHHHHHHHHHHHh
Confidence 6778888888544 333221 114799999 777899999999999999987653
No 64
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=9.5e-26 Score=221.26 Aligned_cols=312 Identities=10% Similarity=0.029 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|.+ ++++|+|||+|+..++.+++.. ..||+ .|+++..+|+++..++...|.
T Consensus 34 ~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~-----------~~~gd-~Vl~~~~~~~~~~~~~~~~g~--- 96 (375)
T 2fnu_A 34 SLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEF-----------SADRN-EIITTPISFVATANMLLESGY--- 96 (375)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCC-----------CTTSC-EEEECSSSCTHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhccc-----------CCCCC-EEEECCCccHhHHHHHHHCCC---
Confidence 346677799999987 6999999999999999877310 01445 899999999999999999888
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+++.+++++++.+|+++|+++++++ +++|+++++ +|.+.|+++|.++|++||+++|+|++|+.+......
T Consensus 97 ~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~- 166 (375)
T 2fnu_A 97 TPVFAGIKNDGNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK- 166 (375)
T ss_dssp EEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE-
T ss_pred EEEEeccCCCCCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCe-
Confidence 8889999887889999999988654 888887776 899999999999999999999999999987654221
Q ss_pred cCcccCCCCCCccceeCccccCCCcccceEEEEe-CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFK-QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
.+.....+++.++++||+++ | |+|++++. ++++............ .+.. ...++...++. ..+...+.+
T Consensus 167 ---~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~--~~~~~~~~~ 236 (375)
T 2fnu_A 167 ---KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELHEKMKLFRSHGM--LKKD-FFEGEVKSIGH--NFRLNEIQS 236 (375)
T ss_dssp ---ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHHTBTTE--EESS-SSCEEESSCCC--BCCCCHHHH
T ss_pred ---eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHHHHHHHHhcCC--cccc-ccccccccccc--cCCCCHHHH
Confidence 12212245666777889995 4 78888885 4544433321111000 0000 00000011110 001233333
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC---cee--EEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP---EMV--NVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~---~~~--~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+.+. ..+++++..++..++++++.+.|++ ++++++..++ ..+ .+.+.+...... + ..+
T Consensus 237 a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~ 300 (375)
T 2fnu_A 237 ALGLS--QLKKAPFLMQKREEAALTYDRIFKD-NPYFTPLHPLLKDKSSNHLYPILMHQKFFT-----------C--KKL 300 (375)
T ss_dssp HHHHH--HHTTHHHHHHHHHHHHHHHHHHHTT-CSSEEESGGGCSSCCCCSCEEEEECGGGGG-----------G--HHH
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCCCcceEEEEEEeCccccc-----------h--HHH
Confidence 33332 3456788889999999999999999 8899886431 112 223333211000 0 245
Q ss_pred HHHHHHhcccEEEeee-e------eC-------C------cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 428 LKGRMMQAGTMMVGYQ-P------LN-------D------LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~-~------~~-------~------~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.|.+.|+.+.... + +. - ..+++|++ ++..+|++||++++++|++++++
T Consensus 301 l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~-~~~~~t~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 301 ILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLP-CHANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp HHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEec-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 6777878874433110 0 00 0 02689999 88899999999999999987654
No 65
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=5.1e-26 Score=222.58 Aligned_cols=290 Identities=16% Similarity=0.079 Sum_probs=207.6
Q ss_pred HHHHHHHHHHhCC-CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIGW-QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++++++++|. ++.++++|+|||+|+..++.++.. ||+ .|+++..+|.++...++..|.
T Consensus 70 ~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~g~--- 131 (367)
T 3euc_A 70 EALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAAR--------------PGA-KVMAPVPGFVMYAMSAQFAGL--- 131 (367)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCC--------------TTC-EEEEEESCSCCSCHHHHTTTC---
T ss_pred HHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcC--------------CCC-EEEEcCCCHHHHHHHHHHcCC---
Confidence 4567778999999 667899999999999999887643 445 788888899999999998888
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc---ChHHHHHHHHHc--CcEEEeecccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PIEEIADICQKY--NMWLHVDAAWGGGLL 268 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l~~I~~i~~~~--~~~l~vD~a~~~~~~ 268 (480)
+++.+|.++++.+|+++|++++++. ++++|++++++|++|.+. ++++|.++|++| |+++|+|++|+.+..
T Consensus 132 ~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~ 206 (367)
T 3euc_A 132 EFVGVPLRADFTLDRGAMLAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQ 206 (367)
T ss_dssp EEEEEECCTTSCCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSS
T ss_pred eEEEecCCCCCCCCHHHHHHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcc
Confidence 8899999988999999999999873 188999999999999995 478888889999 999999999987542
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.... +... ..+.++++.|++|++..+.++|+++. +++...........|- ..
T Consensus 207 ~~~~---~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~-----------------------~~ 258 (367)
T 3euc_A 207 ESWM---SRLT-DFGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPYN-----------------------VN 258 (367)
T ss_dssp CCSG---GGGG-TCTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSSC-----------------------CC
T ss_pred cchH---HHHh-hCCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCCC-----------------------CC
Confidence 1111 0111 11455778899999544467888886 4444444322111110 12
Q ss_pred chHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+..+++...+. .+.+++..++..++++++.+.|++ +|++++. ++....+.+.+ + . ..+
T Consensus 259 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~-~~~~~~~~~~~-~-~----------------~~~ 318 (367)
T 3euc_A 259 VLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAA-HGGVTVF-PSAANFLLARV-P-D----------------AAQ 318 (367)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHT-STTCEEC-CCSSSEEEEEC-S-C----------------HHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEC-CCCCeEEEEEC-C-C----------------HHH
Confidence 333333333332 556788889999999999999999 8899963 44444444432 2 1 245
Q ss_pred HHHHHHhcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 428 LKGRMMQAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.|.+.|+.+....... ...+++|++ .+ +++|+++++++|++++++
T Consensus 319 l~~~l~~~gi~v~~~~~~~~~~~~~iRis-~~---~~~~i~~~~~~l~~~l~~ 367 (367)
T 3euc_A 319 TFDRLLARKVLIKNVSKMHPLLANCLRVT-VS---TPEENAQFLEAFAASLQD 367 (367)
T ss_dssp HHHHHHTTTEECEECGGGCGGGTTEEEEE-CC---CHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCeEEEECCccCCCCCCEEEEe-cC---CHHHHHHHHHHHHHHhcC
Confidence 6777888885543322211 115799999 43 899999999999998753
No 66
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.94 E-value=7.1e-26 Score=224.77 Aligned_cols=319 Identities=17% Similarity=0.159 Sum_probs=211.8
Q ss_pred hhcChhhHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV 181 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~ 181 (480)
|.......++++++.+++.+.+| .++.++++|+|||+|+..++.+++. ||+ .|+++.++|+++
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--------------~gd-~vl~~~p~~~~~ 135 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLID--------------PGD-VVITENPSYINT 135 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEEESCCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcC--------------CCC-EEEEeCCChHHH
Confidence 54444567888888888888778 4567899999999999999988853 445 788888999999
Q ss_pred HHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE-EeccCCCccccccChH---HHHHHHHHcCcEE
Q psy12303 182 RSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFV-NCTSGTTVLGAFDPIE---EIADICQKYNMWL 257 (480)
Q Consensus 182 ~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~~l~---~I~~i~~~~~~~l 257 (480)
..++...|. +++.+|.++++ +|+++|++++++....+.++++| ++++++|++|.+.|++ +|.++|++||+++
T Consensus 136 ~~~~~~~g~---~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~l 211 (407)
T 2zc0_A 136 LLAFEQLGA---KIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLI 211 (407)
T ss_dssp HHHHHTTTC---EEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHcCC---EEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 999988887 78888887665 99999999998433233347786 5889999999999876 9999999999999
Q ss_pred EeeccccccccccccccCcccCCC--CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGI--ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~--~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
|+|++|+.+.+...... .+..+ .+.++++.+++|+++.+..+|+++++ +++..........+..
T Consensus 212 i~De~~~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~----------- 277 (407)
T 2zc0_A 212 IEDTAYNFMRYEGGDIV--PLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEILKKVLMQKQPIDF----------- 277 (407)
T ss_dssp EEECTTTTSBSSCSSCC--CGGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHHHHHHHHHHTTTTS-----------
T ss_pred EEECCCcccccCCCCCC--ChhhcCCCCCEEEEcccccccCCCcceEEEecC-HHHHHHHHHHHHhhcC-----------
Confidence 99999998754221110 11111 13446777899999944578998875 4444433211111100
Q ss_pred CCCccccCCCCCCchHHHHHHHHhc-H-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCc
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAKG-D-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~g-~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~ 413 (480)
.+.......+...++... . +.+++..++..++++++.+.|+++.++++++. |..+.+++...+....
T Consensus 278 -------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 346 (407)
T 2zc0_A 278 -------CAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTK-PIAGMFVMFFLPEGAD--- 346 (407)
T ss_dssp -------SSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC-CSBSSEEEEECSTTCC---
T ss_pred -------CCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec-CCCcEEEEEEcCCCCC---
Confidence 000011112222232211 2 44666778888899999999986236777643 4444443322222111
Q ss_pred hhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 414 HEKRLNILGEITPILKGRMMQA-GTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++ |+.+.....+. ...+++|++ ++.. |+++|++++++|++++++
T Consensus 347 -----------~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis-~~~~-~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 347 -----------GISFANELMEREGVVVVPGKPFYTDESGKNAIRLN-FSRP-SKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp -----------HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEE-CSSS-CTTHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEE-eCCC-CHHHHHHHHHHHHHHHHH
Confidence 23567778788 74433321111 114799999 4444 899999999999987653
No 67
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.94 E-value=3.8e-25 Score=215.28 Aligned_cols=294 Identities=12% Similarity=0.040 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++++++++|.++.++++|+|||+|+..++.++.. ||+ .|+++..+|+++...++..|.
T Consensus 53 ~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------------~gd-~vl~~~~~~~~~~~~~~~~g~--- 114 (354)
T 3ly1_A 53 ILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYAS--------------LEA-QLVIPELTYGDGEHFAKIAGM--- 114 (354)
T ss_dssp HHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEESSSCTHHHHHHHHTTC---
T ss_pred hHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhC--------------CCC-eEEECCCCchHHHHHHHHcCC---
Confidence 35678889999999878999999999999999987743 445 788888999999999999988
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|.++++.+|+++|++++++. .++++|++++++|++|.+.|++++.++++. +|+++|+|++|+.+.....
T Consensus 115 ~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~ 190 (354)
T 3ly1_A 115 KVTKVKMLDNWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPR 190 (354)
T ss_dssp EEEEECCCTTSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTT
T ss_pred EEEEecCCCCCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccc
Confidence 8899999888999999999999731 128999999999999999999998888888 9999999999997654221
Q ss_pred cccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 272 KYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 272 ~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.... .......+.++++.|+||+++ .+.++|+++. ++............+ ....
T Consensus 191 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------------~~~~ 246 (354)
T 3ly1_A 191 FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAGE-----------------------KINF 246 (354)
T ss_dssp CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCS-----------------------CCCH
T ss_pred cCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCCC-----------------------CCCH
Confidence 1000 011111144578889999997 4467888886 445544432211110 0123
Q ss_pred hHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+..++....+ ..+.+++..++..++++++.+.|++ . +++++ ++....+.+.+ +.. ..++
T Consensus 247 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~-~~~~~~~~~~~-~~~----------------~~~~ 306 (354)
T 3ly1_A 247 SGVDAALASMNDSAFITYSKKSNDVSRQILLKALED-L-KLPYL-PSEGNFVFHQL-VVP----------------LKDY 306 (354)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCCSSEEEEEC-SSC----------------HHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeEC-CCCceEEEEEC-CCC----------------HHHH
Confidence 3344443333 2366788889999999999999998 5 77764 44444444432 211 2456
Q ss_pred HHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|.+.|+. +. +.+.+..+++|+++ + +++|++++++.|++++++
T Consensus 307 ~~~l~~~gi~-v~-g~~~~~~~~iRis~-~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 307 QTHMADAGVL-IG-RAFPPADNWCRISL-G---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp HHHHHHTTEE-CC-CCCTTCTTEEEEEC-C---CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCEE-Ee-ecCCCCCCEEEEEc-C---CHHHHHHHHHHHHHHHHh
Confidence 7778888844 44 33333368999993 3 799999999999998753
No 68
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=2.5e-26 Score=225.34 Aligned_cols=305 Identities=13% Similarity=0.081 Sum_probs=205.9
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .+++++|||+|+..++.+++-. ||+ .|+++..+|+++..++...|. +
T Consensus 41 ~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~-------------~gd-~v~~~~~~~~~~~~~~~~~g~---~ 101 (374)
T 3uwc_A 41 EKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIG-------------AGD-EVITCANTFIASVGAIVQAGA---T 101 (374)
T ss_dssp HHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCHHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC-------------CCC-EEEECCCccHHHHHHHHHcCC---E
Confidence 44566788888887 5899999999999888776211 445 788999999999999999988 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
++.++.++++.+|+++|+++++++ +++|+ ++|++|.+.|+++|.++|++||+++|+|++|+.+...... .
T Consensus 102 ~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~-~ 171 (374)
T 3uwc_A 102 PVLVDSENGYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDK-F 171 (374)
T ss_dssp EEEECBCTTSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E
T ss_pred EEEEecCCCCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe-e
Confidence 899999888899999999988764 77777 7789999999999999999999999999999976542211 1
Q ss_pred CcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. +. .+|++++|+| |+++++...|+++.+++................ .+.... .+.......+
T Consensus 172 ~----~~-~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~----~~~~~~~~~~ 235 (374)
T 3uwc_A 172 V----GS-WGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLIN-------RDVCVE----YGINCRMDTI 235 (374)
T ss_dssp T----TS-SSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEE-------TTEESS----CCCBCBCCHH
T ss_pred c----cc-cccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccc-------cCcccc----ccccCCCCHH
Confidence 1 11 3699999977 999863446777766655543332111100000 000000 1111222233
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK-FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
.+++.....+++++..++..++++++.+.|.+ .++ +++...+......|...+..... ..++.+.
T Consensus 236 ~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~ 301 (374)
T 3uwc_A 236 QAVIANRLMNQLETITEKRRGIAHLYDQSFVD-LSEFIDVPVRREGVYHVFHIYVLRVKY-------------RDQLFQY 301 (374)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGG-GTTTEECCCCCTTEECCCSSEEEEETT-------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEeccCCCCCceeeEEEEEEcCC-------------HHHHHHH
Confidence 33333333456778889999999999999999 787 88754333222111111001000 2456778
Q ss_pred HHhcccEEEeeee--e------C--C------------cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQAGTMMVGYQP--L------N--D------------LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~~g~~~~~~~~--~------~--~------------~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.++|+.+....+ . . + ....+|++ ++..+|++||+++++.|++++++
T Consensus 302 L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~-~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 302 LKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLP-AHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEEC-CCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEcc-CCCCCCHHHHHHHHHHHHHHHHh
Confidence 8888854322110 0 0 0 02689999 88999999999999999998764
No 69
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.94 E-value=1.4e-25 Score=221.16 Aligned_cols=325 Identities=10% Similarity=0.034 Sum_probs=217.4
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...+......|....+..++++++.+++.+.+|. +++ ++++|+|+|+|+..++.++..
T Consensus 48 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~-------------- 113 (386)
T 1u08_A 48 LQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVR-------------- 113 (386)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCC--------------
Confidence 335555444332334544455788999999999998885 456 899999999999999988743
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
||+ .|+++.++|+++...++..|. +++.+|.++ ++.+|+++|++++++. +++|++++++|++|.+.|
T Consensus 114 ~gd-~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~ 183 (386)
T 1u08_A 114 NGD-EVICFDPSYDSYAPAIALSGG---IVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPHNPSATVWQQA 183 (386)
T ss_dssp TTC-EEEEEESCCTTHHHHHHHTTC---EEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHH
T ss_pred CCC-EEEEeCCCchhHHHHHHHcCC---EEEEeecCcccCcCCHHHHHHhhccc------CEEEEEeCCCCCCCccCCHH
Confidence 445 788888899999999999888 788999876 5789999999998643 899999999999999976
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS 319 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~ 319 (480)
+++|.++|++||+++|+|++|+.+.+....... ..+.+..+.|+++.|+||+++.| ..+|+++++ ++.........
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~ 262 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP-APISAEIRKVH 262 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC-HHHHHHHHHHH
Confidence 699999999999999999999986542211100 00100125789999999999843 458998875 44443322110
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN 399 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~ 399 (480)
. +.. + ........++..+++. +.+.++++.++..++++++.+.|++ . |+++. .|..+.
T Consensus 263 ~-~~~--------------~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~g~ 320 (386)
T 1u08_A 263 Q-YLT--------------F---SVNTPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNE-S-RLEIL-PCEGTY 320 (386)
T ss_dssp H-HHT--------------S---SCCHHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTS-S-SCEEC-CCCBSS
T ss_pred H-hhc--------------c---CCChHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHH-C-CCeec-CCCceE
Confidence 0 000 0 0000111223333333 3566788889999999999999999 5 88875 454444
Q ss_pred EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 400 VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 400 v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
+++...+.. ...+ ..++.+.|. +.|+.+.....+. ...+++|+++. +++++|++++++|++
T Consensus 321 ~~~~~~~~~-~~~~-----------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 321 FLLVDYSAV-STLD-----------DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERLRQ 385 (386)
T ss_dssp EEEEECTTT-CCSC-----------HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHHTT
T ss_pred EEEEecCCC-CCCC-----------HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHHHHhh
Confidence 333222211 0000 235666666 4675443322221 11579999943 489999999999865
No 70
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=1.2e-25 Score=220.31 Aligned_cols=312 Identities=11% Similarity=0.074 Sum_probs=215.5
Q ss_pred HHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc
Q psy12303 91 EWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ 168 (480)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~ 168 (480)
+.+...+......|.......++++++.+++.+.+|. +++++++|+|||+|+..++.++.+ ||+
T Consensus 49 ~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--------------~gd 114 (370)
T 2z61_A 49 DEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIID--------------DGD 114 (370)
T ss_dssp HHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCC--------------TTC
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcC--------------CCC
Confidence 4444444332334544455678888988888887774 557899999999999999988743 445
Q ss_pred eEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 169 LVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 169 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.|+++.++|+++...+...|. +++.+| +|+++|++++++. +++|++++++|++|.+.|++ |.+
T Consensus 115 -~vl~~~p~~~~~~~~~~~~g~---~~~~v~------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~-l~~ 177 (370)
T 2z61_A 115 -EVLIQNPCYPCYKNFIRFLGA---KPVFCD------FTVESLEEALSDK------TKAIIINSPSNPLGEVIDRE-IYE 177 (370)
T ss_dssp -EEEEESSCCTHHHHHHHHTTC---EEEEEC------SSHHHHHHHCCSS------EEEEEEESSCTTTCCCCCHH-HHH
T ss_pred -EEEEeCCCchhHHHHHHHcCC---EEEEeC------CCHHHHHHhcccC------ceEEEEcCCCCCcCcccCHH-HHH
Confidence 788889999999999999887 777777 6899999988653 88999999999999999999 999
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
+|++||+++|+|++|+.+.........-.+.+..+.|+++.|+||+++.| ..+|++++++ +...........+..
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~--- 253 (370)
T 2z61_A 178 FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND-EIIEAILKLQQNLFI--- 253 (370)
T ss_dssp HHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHHHHHHHTS---
T ss_pred HHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-HHHHHHHHHHhhccc---
Confidence 99999999999999998765221101001112336789999999999743 4588888654 444332211111000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEe
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~ 404 (480)
....+..+++...+ +.+.+++..++..++++++.+.|++ . |+++. .|..+.+++..
T Consensus 254 ------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~ 312 (370)
T 2z61_A 254 ------------------SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD-F-GWEVN-NPIGAYYVFPN 312 (370)
T ss_dssp ------------------SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCBCC-CCCBTTEECCB
T ss_pred ------------------CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeec-CCCcceEEEEe
Confidence 01233333333333 3566788888999999999999999 5 88764 45555444322
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+. . ..++.+.|. +.|+.+ .++...+ ..+++|++ .. +++++|+++++.|+++++
T Consensus 313 ~~~--~--------------~~~~~~~l~~~~gi~v-~~g~~f~~~~~~~~Ri~-~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 313 IGE--D--------------GREFAYKLLKEKFVAL-TPGIGFGSKGKNYIRIS-YA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CSS--C--------------HHHHHHHHHHHHCEEC-EEGGGGCGGGSSBEEEE-CC--SCHHHHHHHHHHHHHHHC
T ss_pred cCC--C--------------HHHHHHHHHHhCCEEE-eCchhhCCCCCCEEEEE-Ee--CCHHHHHHHHHHHHHHHh
Confidence 221 0 235667776 567444 3322112 14699999 44 699999999999998765
No 71
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.94 E-value=1.4e-25 Score=222.10 Aligned_cols=308 Identities=12% Similarity=-0.013 Sum_probs=212.4
Q ss_pred hHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 110 FILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
..++++.+.+++.+.+| .++.++++|+|||+|+..++.++.. ||+ .|+++.++|+++..++..
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--------------~gd-~vl~~~p~~~~~~~~~~~ 132 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTK--------------PGD-GVIIITPVYYPFFMAIKN 132 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--------------TTC-EEEECSSCCTHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcC--------------CCC-EEEEcCCCcHhHHHHHHH
Confidence 67888888888888888 5567899999999999999987743 445 788899999999999998
Q ss_pred cCCCCCCeEEeeCC-CC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeec
Q psy12303 188 CGLGTDNCVEVPSD-KR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 188 ~g~~~~~v~~v~~~-~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~ 261 (480)
.|. +++.+|.+ ++ +.+|+++|++++++. ++++|++++++|++|.+.| +++|.++|++||+++|+|+
T Consensus 133 ~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De 204 (399)
T 1c7n_A 133 QER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDE 204 (399)
T ss_dssp TTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEEC
T ss_pred cCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEc
Confidence 887 78888875 33 369999999998721 2889999999999999988 9999999999999999999
Q ss_pred cccccccccccccCcccCCC----CCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 262 AWGGGLLLSKKYRHPRLTGI----ERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~----~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+|+.+....... . .+..+ ...++++.+++|+++.| .++|+++++++++..........+. .
T Consensus 205 ~~~~~~~~g~~~-~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~------------~ 270 (399)
T 1c7n_A 205 IHFDLIMPGYEH-T-VFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATS------------G 270 (399)
T ss_dssp TTTTCBCTTCCC-C-CGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTT------------C
T ss_pred cccccccCCCCc-c-cHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcc------------c
Confidence 999865422111 0 11111 13457788999999843 5689999876655543321111110 0
Q ss_pred CCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
.+ ...+..+++...+ +.+.+++..++..++++++.+.|++++|+++++ ++..+.+++...+.. +.+
T Consensus 271 ------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~- 338 (399)
T 1c7n_A 271 ------MP--FTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP-LIEGTYLQWIDFRAL--KMD- 338 (399)
T ss_dssp ------CC--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC-CCSBSSEEEEECGGG--CCC-
T ss_pred ------CC--CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe-cCCceEEEEEEcccC--CCC-
Confidence 00 1222333332222 356778888889999999999998624788764 455555543222211 000
Q ss_pred hhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRMM-QAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|. +.|+.+.....+. ...+++|+++. . ++++|+++++.|++++++
T Consensus 339 ----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~--~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 339 ----------HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA-A--PSSVIQESLERLNKALKD 392 (399)
T ss_dssp ----------HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC-S--CHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEec-c--CHHHHHHHHHHHHHHHHH
Confidence 235677786 5775544322221 11579999943 3 389999999999887653
No 72
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.94 E-value=3.7e-26 Score=231.18 Aligned_cols=322 Identities=12% Similarity=0.022 Sum_probs=204.6
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCC----eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGD----SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~----~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
...+...++|+.+++++++++|+++.+ +++++ |+.+|..++.++.+ ||+ .|+++..+|.+
T Consensus 83 ~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~s-Gs~an~~~~~all~--------------pGD-~Vl~~~~~~~~ 146 (483)
T 1rv3_A 83 GGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYS-GSPANFAVYTALVE--------------PHG-RIMGLDLPDGG 146 (483)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSS-HHHHHHHHHHHHTC--------------TTC-EEEEECGGGTC
T ss_pred CcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECC-cHHHHHHHHHHhcC--------------CCC-EEEEecCccCc
Confidence 345567889999999999999997643 55555 44888887877643 666 78888888877
Q ss_pred HHHH--------HHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHH
Q psy12303 181 VRSC--------AAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQ 251 (480)
Q Consensus 181 ~~~~--------~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~ 251 (480)
+... +...|... .++.++++ +++.+|+++|++++++. +|++|++ +++|++ .+.|+++|.++|+
T Consensus 147 ~~~~~~~~~~~~v~~~G~~~-~~v~~~~~~~~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~ia~ 218 (483)
T 1rv3_A 147 HLTHGFMTDKKKISATSIFF-ESMAYKVNPDTGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRKIAD 218 (483)
T ss_dssp CGGGCCBCSSCBCSHHHHHS-EEEEECBCTTTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHHHHH
T ss_pred CcchhhhhcccCcccccceE-EEEECccccCCCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHHHHH
Confidence 6432 22233211 33444446 56899999999999843 2888888 777777 8899999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhh-HhhhcCCccccccccccc
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLL-ISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 330 (480)
++|+++|+|+||+.+....+.... .+ .++|++++++||++.+|.+ |++++++.... .........|-.. .. .
T Consensus 219 ~~g~~livD~ah~~g~~~~~~~~~-p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~~-~~-~ 291 (483)
T 1rv3_A 219 ENGAYLMADMAHISGLVVAGVVPS-PF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLE-SL-I 291 (483)
T ss_dssp HTTCEEEEECTTTHHHHHHTSSCC-GG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHH-HH-H
T ss_pred HcCCEEEEEccchhcccccCCCCC-CC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHHH-HH-h
Confidence 999999999999877665443333 22 2689999999999988877 99998875210 0000000000000 00 0
Q ss_pred CcccCCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce-eEEEEEeecCc
Q psy12303 331 DVRYDTGDKVIQCGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM-VNVSFWYLPTR 408 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~-~~v~f~~~~~~ 408 (480)
......+ .+++... ...++..+++.....+++++.++..++++++.+.|.+ . |++++.+... ..+.+.+.+..
T Consensus 292 ~~~~~~~---~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~v~~~~~g 366 (483)
T 1rv3_A 292 NSAVFPG---LQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE-L-GYKIVTGGSDNHLILVDLRSKG 366 (483)
T ss_dssp HHHHTTT---TCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSCSSSEEEEEGGGGT
T ss_pred hhhcCCc---ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh-c-CCEeccCCCCCceEEEeccCCC
Confidence 0000000 0111111 1234445566555567889999999999999999999 5 9998754222 23333322211
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEe---eeee--CCcccEEEEecccCCCC----HHHHHHHHHHHHHhhc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVG---YQPL--NDLPNFFRNIISSAAVT----EGDIDFLLTEMDRLGH 478 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~---~~~~--~~~~~~~R~~~~~~~~t----~~di~~~~~~l~~~~~ 478 (480)
.. ..++.+.|.+.|+.+.. ++.. .+ .+++|++ ....+| ++|++++++.|+++++
T Consensus 367 ~~--------------~~~~~~~L~~~gI~v~~~~~pg~~~~~~-~~~iRis-~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 367 TD--------------GGRAEKVLEACSIACNKNTCPGDKSALR-PSGLRLG-TPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp CC--------------HHHHHHHHHHTTEECEEECCSSCSCTTS-CCEEEEE-CHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CC--------------HHHHHHHHHhCCcEEecCCCCCCCcCCC-CceEEee-cCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 11 23455666677744331 2111 12 4699999 444444 9999999999988754
No 73
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.2e-25 Score=223.36 Aligned_cols=327 Identities=13% Similarity=0.070 Sum_probs=220.9
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
.+.+...+......|....+..++++++.+++.+.+|. +++ ++++|+|||+|+..++.++.. |
T Consensus 44 ~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~--------------~ 109 (411)
T 2o0r_A 44 LQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVE--------------P 109 (411)
T ss_dssp HHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCC--------------T
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcC--------------C
Confidence 34454444332334544455678999999999998885 455 899999999999999988743 4
Q ss_pred CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC---CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 167 GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK---RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 167 g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~---~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
|+ .|+++..+|+++..++...|. +++.+|.++ ++.+|+++|+++++++ +++|++++++|++|.+.|
T Consensus 110 gd-~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~~~~ 179 (411)
T 2o0r_A 110 GS-EVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAVLSA 179 (411)
T ss_dssp TC-EEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred CC-EEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCCCCH
Confidence 45 788888999999999998888 788888865 3679999999998653 899999999999999966
Q ss_pred --hHHHHHHHHHcCcEEEeecccccccccccccc-CcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYR-HPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~ 318 (480)
+++|.++|++||+++++|++|+.+.+...... ...+.+..+.|+++.|+||+++.| ..+|+++++ ++........
T Consensus 180 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~ 258 (411)
T 2o0r_A 180 TELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AELIAGVRAA 258 (411)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHHHHHHHHH
Confidence 59999999999999999999998764221100 001112236789999999999733 458998874 4444332211
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
. .+.. + +.......++..+++. +.+.++++.++..++++++.+.|++ . |+++. +|..+
T Consensus 259 ~-~~~~--------------~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~g 316 (411)
T 2o0r_A 259 K-QYLS--------------Y---VGGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTE-I-GFAVH-DSYGT 316 (411)
T ss_dssp H-HHHT--------------S---CCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHH-H-TCEEC-CCCBS
T ss_pred H-hhcc--------------C---CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHH-c-CCEec-CCCee
Confidence 0 0000 0 0001122233334433 3667888889999999999999999 5 88875 45555
Q ss_pred EE-EEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeee-CC-----------cccEEEEecccCCCCHH
Q psy12303 399 NV-SFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPL-ND-----------LPNFFRNIISSAAVTEG 464 (480)
Q Consensus 399 ~v-~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~-~~-----------~~~~~R~~~~~~~~t~~ 464 (480)
.+ ++.+ +.. .+.+ ..++.++|. +.|+.+.....+ .. ..+++|+++. ++++
T Consensus 317 ~~~~~~~-~~~-~~~~-----------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~---~~~e 380 (411)
T 2o0r_A 317 YFLCADP-RPL-GYDD-----------STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC---KRDD 380 (411)
T ss_dssp SEEEEEC-GGG-TCCC-----------HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC---SCHH
T ss_pred EEEEEec-CCC-CCCC-----------HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec---CCHH
Confidence 43 3433 211 0000 235666665 467544332222 10 1478999943 3899
Q ss_pred HHHHHHHHHHHhhcc
Q psy12303 465 DIDFLLTEMDRLGHD 479 (480)
Q Consensus 465 di~~~~~~l~~~~~~ 479 (480)
+|++++++|++++++
T Consensus 381 ~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 381 TLDEAIRRLSVLAER 395 (411)
T ss_dssp HHHHHHHHHGGGGC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987653
No 74
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=2.3e-25 Score=220.50 Aligned_cols=302 Identities=14% Similarity=0.094 Sum_probs=210.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
+...+.+++++++++++|.+ ++++|+|||+|+..++.++.+ ||+ .|+++.++|+++..++...
T Consensus 85 g~~~~~~~l~~~la~~~g~~--~v~~~~ggt~a~~~~~~~~~~--------------~gd-~V~~~~p~~~~~~~~~~~~ 147 (398)
T 3a2b_A 85 GTLDIHVELEEKLSAYVGKE--AAILFSTGFQSNLGPLSCLMG--------------RND-YILLDERDHASIIDGSRLS 147 (398)
T ss_dssp CCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHSSC--------------TTC-EEEEETTCCHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEECCccCHHHHHHHHHc
Confidence 34577788999999999985 599999999999999987743 445 8899999999999999999
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|. +++.+|. +|+++|++++++..+ .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.+
T Consensus 148 g~---~~~~v~~-----~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~ 217 (398)
T 3a2b_A 148 FS---KVIKYGH-----NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVI 217 (398)
T ss_dssp SS---EEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred CC---ceEEeCC-----CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCccccc
Confidence 87 7788876 589999999876211 1389999999999999999999999999999999999999987653
Q ss_pred ccccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 269 LSKKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 269 ~~~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
...........++ +++|+++.|+||+++ |.| |+++.+ ++...........+.... +...
T Consensus 218 ~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~-----------------~~~~ 277 (398)
T 3a2b_A 218 GHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFSA-----------------SMTP 277 (398)
T ss_dssp SGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSSB-----------------CCCH
T ss_pred CCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceecC-----------------CCCH
Confidence 1100000011122 246999999999998 555 887764 444443322111111100 0001
Q ss_pred Cc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 348 DI-FKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 348 ~~-l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
.. ..+..+++.+ +.++++.++..++++++.+.|++ . |++++ ++....+.+.+ +.. .+ ..
T Consensus 278 ~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~g~~~~~~~-~~~------------~~--~~ 337 (398)
T 3a2b_A 278 ASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLD-H-GFDLG-ATESPILPIFI-RSN------------EK--TF 337 (398)
T ss_dssp HHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHH-T-TCCBC-SCCSSEEEEEC-CCH------------HH--HH
T ss_pred HHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHh-c-CCCcC-CCCCCEEEEEc-CCH------------HH--HH
Confidence 11 1223344442 33567788889999999999999 5 88765 45544444432 211 00 24
Q ss_pred HHHHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 427 ILKGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++.+.|.++|+. +.+..... ..+++|++ .+..++++++++++++|++++++
T Consensus 338 ~l~~~l~~~gi~-v~~~~~~~~~~~~~~iRis-~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 338 WVTKMLQDDGVF-VNPVVSPAVPAEESLIRFS-LMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp HHHHHHHHTTEE-CEEECTTTSCGGGCEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcE-EEeeCCCCCCCCCceEEEE-EeCCCCHHHHHHHHHHHHHHHHH
Confidence 677888888754 44332221 14799999 77778999999999999988764
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=1.9e-24 Score=211.63 Aligned_cols=290 Identities=10% Similarity=-0.010 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 111 ILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
.++++.+.+++.+.+|. +++++++|+|+++++..++.++.. ||+ .|+++..+|+++..++...
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~--------------~gd-~Vl~~~~~y~~~~~~~~~~ 136 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGG--------------PGR-TALGFQPSYSMHPILAKGT 136 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCS--------------TTC-EEEEEESSCTHHHHHHHHT
T ss_pred HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcC--------------CCC-EEEEcCCChHHHHHHHHHc
Confidence 57888888888887665 457899999999999988887743 445 7888889999999999998
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|. +++.+|.++++.+|+++|++++++. ++++|++++++|++|.+.|++++.++|+.+++++++|++|+.+..
T Consensus 137 g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~ 208 (369)
T 3cq5_A 137 HT---EFIAVSRGADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSP 208 (369)
T ss_dssp TC---EEEEEECCTTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCC
T ss_pred CC---EEEEecCCcCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcC
Confidence 87 7889998877889999999999862 178899999999999999999999999999999999999998764
Q ss_pred ccccccCcccCCCCC-CccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 269 LSKKYRHPRLTGIER-ADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~-~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
..+... ..... + .++++.|+||+++.| .++|++++++ +...........| +
T Consensus 209 ~~~~~~--~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~---------------------~-- 261 (369)
T 3cq5_A 209 SPSATT--LLEKY-PTKLVVSRTMSKAFDFAGGRLGYFVANP-AFIDAVMLVRLPY---------------------H-- 261 (369)
T ss_dssp SCCGGG--GTTTC-TTTEEEEEESSSTTSCGGGCCEEEEECT-HHHHHHHTTSCTT---------------------C--
T ss_pred CcchHH--HHhhC-CCCEEEEEechHhcCCcccceEEEEeCH-HHHHHHHHcCCCC---------------------C--
Confidence 211111 11212 3 568888999999743 4679988764 4444332211111 0
Q ss_pred CCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 347 NDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 347 ~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
...+..+++...+ ..+.+++..++..++++++.+.|++ +|+++. ++....+.+.+ + .. .
T Consensus 262 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~-~~~~~~~~~~~-~--~~--------------~ 321 (369)
T 3cq5_A 262 LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE--LGYAVV-PSESNFVFFGD-F--SD--------------Q 321 (369)
T ss_dssp SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH--HTCEEE-CCSSSEEEEEC-C--SS--------------H
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEC-CCCCeEEEEEC-C--CC--------------H
Confidence 1233333333333 1345778888899999999999998 588876 45555444432 2 10 2
Q ss_pred HHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 426 PILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++.+.|.+.|+. +.+. .. .+++|++ ++ +++|++++++.|+++++
T Consensus 322 ~~l~~~l~~~gi~-v~~~--~~-~~~iRis-~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 322 HAAWQAFLDRGVL-IRDV--GI-AGHLRTT-IG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHHTTEE-CBCC--SC-TTEEEEE-CC---CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCEE-EEEC--CC-CCeEEEE-eC---CHHHHHHHHHHHHHHHh
Confidence 3566777778743 4432 22 5799999 43 79999999999998764
No 76
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=7.8e-25 Score=216.82 Aligned_cols=301 Identities=16% Similarity=0.139 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++.+++++|.+ ..+++++||+|+..++.++.. ||+ .|+++..+|+++..++...|.
T Consensus 90 ~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~~~--------------~gd-~v~~~~~~~~~~~~~~~~~g~- 151 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME--DAILYSSCFDANGGLFETLLG--------------AED-AIISDALNHASIIDGVRLCKA- 151 (401)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHTTHHHHCC--------------TTC-EEEEETTCCHHHHHHHHTSCS-
T ss_pred HHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHcC--------------CCC-EEEEcchhHHHHHHHHHHcCC-
Confidence 45567788899999997 356777789999988877643 445 788899999999998888887
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc-cc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL-LS 270 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~-~~ 270 (480)
+++.+|. +|+++|++++++...++.++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.. ..
T Consensus 152 --~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~ 224 (401)
T 1fc4_A 152 --KRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGEN 224 (401)
T ss_dssp --EEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTT
T ss_pred --ceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCC
Confidence 6777763 489999999987544443589999999999999999999999999999999999999974332 11
Q ss_pred ccccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 271 KKYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
... .+...++ .+.|+++.++||+++++.+ |+++. +++..........++... .....
T Consensus 225 g~~-~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~-~~~~~~~l~~~~~~~~~~-------------------~~~~~ 282 (401)
T 1fc4_A 225 GRG-SHEYCDVMGRVDIITGTLGKALGGASG-GYTAA-RKEVVEWLRQRSRPYLFS-------------------NSLAP 282 (401)
T ss_dssp SCC-HHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEE-CHHHHHHHHHHCHHHHHS-------------------CCCCH
T ss_pred CCc-cHHHcCCCcCCcEEEecchhhccCCCC-EEEEc-CHHHHHHHHHhCcCceeC-------------------CCCCH
Confidence 110 0011122 2578999999999965665 77776 455554433222112110 00122
Q ss_pred hHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+..++++..+.. +..++..++..++++++.+.|++ . +++++ ++....+.+.+ +.. . ...++
T Consensus 283 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~-~~~------------~--~~~~l 344 (401)
T 1fc4_A 283 AIVAASIKVLEMVEAGSELRDRLWANARQFREQMSA-A-GFTLA-GADHAIIPVML-GDA------------V--VAQKF 344 (401)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH-T-TCCBC-CSSSSEEEEEE-ECH------------H--HHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-c-CCccc-CCCCCEEEEEc-CCh------------H--HHHHH
Confidence 333333332211 11367788899999999999999 5 88775 44555555543 211 0 02456
Q ss_pred HHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|.++|+. +.+....+ ..+++|++ ++..++++++++++++|++++++
T Consensus 345 ~~~l~~~gi~-v~~~~~~~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 345 ARELQKEGIY-VTGFFYPVVPKGQARIRTQ-MSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp HHHHHHTTEE-CCEECTTSSCTTCEEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcE-EeeecCCCCCCCCceEEEE-eCCCCCHHHHHHHHHHHHHHHHH
Confidence 7788888744 43332221 14689999 77788999999999999988765
No 77
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=1.2e-25 Score=224.31 Aligned_cols=317 Identities=12% Similarity=0.068 Sum_probs=212.7
Q ss_pred chhcChhhHHHHHHHHHHHHHHhC---CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIG---WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g---~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.|....+..++++++.+++.+.+| .++.++++|+|+|+|+..++.++.+ ||+ .|++..++|+
T Consensus 80 ~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~--------------~gd-~Vl~~~p~y~ 144 (425)
T 1vp4_A 80 QYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLD--------------DES-YCVLDDPAYL 144 (425)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCC--------------TTC-EEEEEESCCH
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCC--------------CCC-EEEEeCCCcH
Confidence 344444567888888888887779 5567899999999999999887743 445 7888889999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHC--CCccEEE-EeccCCCccccccC---hHHHHHHHHHc
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAK--GDIPFFV-NCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~--~~~~~~v-~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
++...+...|. +++.+|.++++ +|+++|++++++..++ +.++++| ++++++|++|.+.| +++|.++|++|
T Consensus 145 ~~~~~~~~~g~---~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~ 220 (425)
T 1vp4_A 145 GAINAFRQYLA---NFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY 220 (425)
T ss_dssp HHHHHHHTTTC---EEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCC---EEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 99999998887 78888887665 9999999999873221 1238887 58999999999976 67899999999
Q ss_pred CcEEEeeccccccccccccccCcccC--CCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLT--GIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
|+++|+|++|+.+........ .+. +..+.++++.|++|+++.+..+|+++++ +++..........+..
T Consensus 221 ~~~li~De~~~~~~~~g~~~~--~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~------- 290 (425)
T 1vp4_A 221 DLFIVEDDPYGALRYEGETVD--PIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGS-KEFIRKIVQAKQSADL------- 290 (425)
T ss_dssp TCEEEEECSSTTCBCSSCCCC--CHHHHHCTTTEEEEEESTTTTCGGGCEEEEECC-HHHHHHHHHHHHHHHS-------
T ss_pred CCEEEEECCCccccCCCCCCc--CHHHhCCCCCEEEEeccccccccccceEEEeeC-HHHHHHHHHHhhhhcC-------
Confidence 999999999998654221100 111 1124567788999999944568998875 4444433211111000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCceeEEEEEe
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAK--G--DEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMVNVSFWY 404 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g--~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~~v~f~~ 404 (480)
+ ...+..+++...+ + .+.+++..++..++++++.+.|++..| +++++ .|..+.+++..
T Consensus 291 -----------~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~-~~~~g~~~~~~ 355 (425)
T 1vp4_A 291 -----------C---SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWV-KSEGGLFIWLT 355 (425)
T ss_dssp -----------S---CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEEC-CCSBSSEEEEE
T ss_pred -----------C---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEe-cCCccEEEEEE
Confidence 0 1223333333333 2 345677778888899999999987224 68875 34444444333
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.... ..++.+.|.++|+.+.....+. ...+++|+++. .. ++++|++++++|++++++
T Consensus 356 ~~~~~~--------------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~-~~-~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 356 LPEGFD--------------TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFC-LP-PDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp CCTTCC--------------TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECS-SS-CHHHHHHHHHHHHHHHHH
T ss_pred cCCCCC--------------HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeC-CC-CHHHHHHHHHHHHHHHHH
Confidence 332211 1235567777775443322221 11479999944 33 899999999999987653
No 78
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=1.7e-25 Score=224.15 Aligned_cols=330 Identities=10% Similarity=0.024 Sum_probs=215.2
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHH--HhcCchhHhcCCCccCCce-EEEecCC
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAAR--HKMFPTYKEKGLSAIKGQL-VMFTSDQ 176 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~--~~~~~~~~~~g~~~~~g~~-~vl~~~~ 176 (480)
..|....+..++++.+.+++.+.+|. ++.++++|+|||+|+..++.++. . ||+. .|+++..
T Consensus 76 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~--------------~gd~~~Vl~~~p 141 (437)
T 3g0t_A 76 SIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTH--------------KNREYGTLFIDP 141 (437)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSC--------------TTCSCCEEEEES
T ss_pred cCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCC--------------CCCccEEEEeCC
Confidence 34544444578888888888888775 45789999999999999998875 3 3341 5777788
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHH-HHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHH
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLV-LERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQ 251 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i-~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~ 251 (480)
+|.++..++...|. +++.+|+++ ++.+|+++|++++ +++ +++|++++++|++|.+.+ +++|.++|+
T Consensus 142 ~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~a~ 212 (437)
T 3g0t_A 142 GFNLNKLQCRILGQ---KFESFDLFEYRGEKLREKLESYLQTGQ------FCSIIYSNPNNPTWQCMTDEELRIIGELAT 212 (437)
T ss_dssp CCHHHHHHHHHHTC---CCEEEEGGGGCTTHHHHHHHHHHTTTC------CCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCC---EEEEEeecCCCCccCHHHHHHHHhcCC------ceEEEEeCCCCCCCCcCCHHHHHHHHHHHH
Confidence 99999999999998 788999864 4578999999999 333 889999999999999987 777899999
Q ss_pred HcCcEEEeecccccccccccccc-------CcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhH-hhhcCCccc
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYR-------HPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLI-SCNQMSAEY 322 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~-------~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~-~~~~~~~~~ 322 (480)
+||+++|+|++|+.+.......- . .+.+..+.++++.|+||+++ .+.++|+++++ +.... ........+
T Consensus 213 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~ 290 (437)
T 3g0t_A 213 KHDVIVIEDLAYFGMDFRKDYSHPGEPLYQP-SVANYTDNYILALSSSKAFSYAGQRIGVLMIS-GKLYEREYPDLEESF 290 (437)
T ss_dssp HTTCEEEEECTTTTCCTTSCCCSTTSSCCCC-CGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC-HHHHHCBCGGGHHHH
T ss_pred HCCcEEEEEcchhhcccCCCcCcccccchhh-ccCCCCCcEEEEEcCccCCCCccceeEEEEEC-HHHhhhhhhcccccc
Confidence 99999999999987654311000 1 11222356788889999998 44678988875 33433 200000000
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCeEEe-----
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEG-----FEKQIDRLMELAEYMVKKIKSMPDKFYLI----- 392 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~-----~~~~~~~~~~l~~~l~~~l~~~~~g~~~~----- 392 (480)
..... .+. . ........+.....+..+++...+.... ++++.++..++++++.+.|++ . |++++
T Consensus 291 ~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~ 364 (437)
T 3g0t_A 291 GRLRF-GEA-L--SSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLD-N-GFNIVYDKDG 364 (437)
T ss_dssp SCSBH-HHH-H--HTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHT-T-TEEESSCEET
T ss_pred cccch-hHH-H--HHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCEEeccccC
Confidence 00000 000 0 0000000000123334444444332222 788889999999999999999 5 99886
Q ss_pred -cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHH
Q psy12303 393 -LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 393 -~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~ 470 (480)
.++..+.+++...+ ... ..++.++|.++|+.+......... .+++|++ ++. .++++|++++
T Consensus 365 ~~~~~~~~~~~~~~~-~~~--------------~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis-~~~-~~~e~i~~~~ 427 (437)
T 3g0t_A 365 NEPLADGFYFTVGYK-GMD--------------SSKLIEKFVRYGMCAITLKTTGSKRNEAMRIC-TSL-LPESQFPDLE 427 (437)
T ss_dssp TEECCSSSEEEEEET-TCC--------------HHHHHHHHHHTTEECEESTTTTCCCTTCEEEE-CSS-SCGGGHHHHH
T ss_pred CCCCceeEEEEEecC-CCC--------------HHHHHHHHHHcCeEEeeccccCCCCCCEEEEE-Eec-CCHHHHHHHH
Confidence 34244444443332 111 246778888888554432211111 2789999 543 3999999999
Q ss_pred HHHHHhhcc
Q psy12303 471 TEMDRLGHD 479 (480)
Q Consensus 471 ~~l~~~~~~ 479 (480)
++|++++++
T Consensus 428 ~~l~~~~~~ 436 (437)
T 3g0t_A 428 KRLQMLNAE 436 (437)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988753
No 79
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.94 E-value=4.1e-25 Score=217.99 Aligned_cols=326 Identities=10% Similarity=-0.021 Sum_probs=217.9
Q ss_pred HHHHHHHHcCcCCcchhcChhhHH-HHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFIL-METVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~-~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
+.+.+...++.....|... ..+ +++++.+++.+.+| .+++++++|+|+|+|+..++.++..
T Consensus 46 v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~-------------- 109 (390)
T 1d2f_A 46 IIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE-------------- 109 (390)
T ss_dssp HHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC--------------
T ss_pred HHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcC--------------
Confidence 3355555554333344332 566 88888888888888 5567899999999999999887643
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC---CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR---GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~---~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|++..++|+++..++...|. +++.+|.+.+ +.+|+++|++++++. ++++|++++++|++|.+.|
T Consensus 110 ~gd-~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 110 TGE-GVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp TTC-EEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCC
T ss_pred CCC-EEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcC
Confidence 445 788888999999999999887 7888888643 358999999998641 2889999999999999977
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC-C-CccceeCccccCC-CcccceEEEEeCchhhHhhh
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE-R-ADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~-~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~ 316 (480)
+++|.++|++||+++|+|++|+.+........ .+..+. . .|. +.+++|+++ .+.++|+++++++.+.....
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~--~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 257 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI--PWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYL 257 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCC--CGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc--CHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHH
Confidence 89999999999999999999998754321111 111121 2 266 889999997 44568999987655544332
Q ss_pred cCCc-ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 317 QMSA-EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 317 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.... .+- ++ + ...+..+++...+ +.+.+++..++..++++++.+.|++++|+++++
T Consensus 258 ~~~~~~~~------------~~------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 316 (390)
T 1d2f_A 258 SALKGRDG------------LS------S--PSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ- 316 (390)
T ss_dssp HHHHTTSC------------CC------S--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC-
T ss_pred HHHhhhcc------------cC------C--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe-
Confidence 1110 000 00 0 1223333332222 356678888889999999999998623788764
Q ss_pred CCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHH
Q psy12303 394 EPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLT 471 (480)
Q Consensus 394 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~ 471 (480)
++..+.+++...+.. +.+ ..++.+.|. +.|+.+.....+. ...+++|+++.. ++++++++++
T Consensus 317 ~~~~~~~~~~~~~~~--~~~-----------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~ 380 (390)
T 1d2f_A 317 IPQSTYLAWLDLRPL--NID-----------DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVA 380 (390)
T ss_dssp CCSBCSEEEEECGGG--CCC-----------HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHH
T ss_pred cCCccEEEEEEcccc--CCC-----------HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHHH
Confidence 455555543222211 000 235677787 5675443322221 114799999443 5899999999
Q ss_pred HHHHhhcc
Q psy12303 472 EMDRLGHD 479 (480)
Q Consensus 472 ~l~~~~~~ 479 (480)
.|++++++
T Consensus 381 ~l~~~l~~ 388 (390)
T 1d2f_A 381 GLINAIRA 388 (390)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987754
No 80
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.94 E-value=6.9e-25 Score=219.62 Aligned_cols=324 Identities=12% Similarity=0.117 Sum_probs=215.4
Q ss_pred hhcChhhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
|....+..++++++.+++.+..| +++.++++|+|||+||..++.++++ ||+ .|+++.+.|.
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~--------------~gd-~vl~~~p~~~ 146 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD--------------PGE-AVLIPTPYYP 146 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCC--------------TTC-EEEEEESCCT
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcC--------------CCC-eEEECCCccc
Confidence 43344557888888888877665 4567899999999999999988754 445 7888889999
Q ss_pred hHHHHHH-HcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc
Q psy12303 180 SVRSCAA-VCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY 253 (480)
Q Consensus 180 s~~~~~~-~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~ 253 (480)
++..++. ..|. +++.+|.++ ++.+|+++|++++++....+.++++|++++++|++|.+.+ +++|.++|++|
T Consensus 147 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ 223 (435)
T 3piu_A 147 GFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK 223 (435)
T ss_dssp THHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 9988777 5676 888999875 4679999999999987666667999999999999999966 58888899999
Q ss_pred CcEEEeeccccccccccccccC--cccCC--C------CCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCccc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRH--PRLTG--I------ERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~--~~~~~--~------~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
|+++++|++|+++.+....... ..... + .+..+++.+++|+++ .+.++|+++..++.......... .+
T Consensus 224 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~ 302 (435)
T 3piu_A 224 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-SF 302 (435)
T ss_dssp TCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHG-GG
T ss_pred CCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHh-hc
Confidence 9999999999886543221111 00000 0 122377889999998 44678999876665544322111 11
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNV 400 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v 400 (480)
.. ........+...+.... .+.+++..++..++++++.+.|++ . |++++ ++..+.+
T Consensus 303 ~~-------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~g~~ 360 (435)
T 3piu_A 303 GL-------------------VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-S-GISCL-NGNAGLF 360 (435)
T ss_dssp SC-------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T-TCEEC-CCCSSSE
T ss_pred CC-------------------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCccc-CCCeeEE
Confidence 00 00011112222222211 234567778888999999999999 4 88875 4555444
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeee--CCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPL--NDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~--~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
++...+...... ... ...++.++|.++ |+.+.....+ .+ .+++|++ +... ++++|++++++|++++
T Consensus 361 ~~~~l~~~~~~~---~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~-~~~iRi~-~~~~-~~e~i~~~l~~l~~~l 429 (435)
T 3piu_A 361 CWVDMRHLLRSN---TFE-----AEMELWKKIVYEVHLNISPGSSCHCTE-PGWFRVC-FANL-PERTLDLAMQRLKAFV 429 (435)
T ss_dssp EEEECGGGSSSS---SHH-----HHHHHHHHHHHTSCEECEEGGGGTCSS-TTEEEEE-CSSS-CHHHHHHHHHHHHHHH
T ss_pred EEEEcccccccC---Cch-----hHHHHHHHHHHHCCEEEeCCcccCCCC-CCEEEEE-eeCC-CHHHHHHHHHHHHHHH
Confidence 443333221100 000 023567777777 7443332221 22 5799999 4433 8999999999999887
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 430 ~~ 431 (435)
T 3piu_A 430 GE 431 (435)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 81
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=4.3e-25 Score=220.67 Aligned_cols=316 Identities=11% Similarity=0.104 Sum_probs=213.7
Q ss_pred hhHHHHHHHHHHHHHHhC----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 109 VFILMETVVLEKMRQIIG----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
+..++++.+.+++.+.+| .++.++++|+|+|+++..++.++++ ||+ .|+++.++|.++...
T Consensus 84 g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~--------------~gd-~Vl~~~p~y~~~~~~ 148 (428)
T 1iay_A 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLAD--------------PGD-AFLVPSPYYPAFNRD 148 (428)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCC--------------TTC-EEEEESSCCTTHHHH
T ss_pred CcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCC--------------CCC-eEEEccCCCcchHHH
Confidence 467888888888888777 5567899999999999999988753 455 788888899988765
Q ss_pred HH-HcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEE
Q psy12303 185 AA-VCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLH 258 (480)
Q Consensus 185 ~~-~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~ 258 (480)
+. ..|. +++.+|.+. ++.+|+++|++++++....+.++++|++++++|++|.+.| +++|.++|++||+++|
T Consensus 149 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 225 (428)
T 1iay_A 149 LRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLV 225 (428)
T ss_dssp TTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEE
Confidence 43 4566 788888863 4579999999999876555556899999999999999999 9999999999999999
Q ss_pred eeccccccccccccccC--cccC-----CCCCCc--cceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccc
Q psy12303 259 VDAAWGGGLLLSKKYRH--PRLT-----GIERAD--SVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDK 328 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~~--~~~~-----~~~~~D--~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 328 (480)
+|++|+.+.+....... .... ++ +.| +++.++||+++.| ..+|++++.++............+ .
T Consensus 226 ~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~--~--- 299 (428)
T 1iay_A 226 CDEIYAATVFDTPQFVSIAEILDEQEMTYC-NKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFG--L--- 299 (428)
T ss_dssp EECTTGGGCCSSSCCCCHHHHHTSGGGTTS-CTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTS--C---
T ss_pred EeccccccccCCCCccCHHHhccccccccC-CCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcc--c---
Confidence 99999986542111100 0111 11 257 6788999999743 567999876665554332110000 0
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEE
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-----DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-----~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~ 403 (480)
...+...++...+. .+.+++..++..++++++.+.|++ . +++++ ++..+++++.
T Consensus 300 ------------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~g~~~~~ 358 (428)
T 1iay_A 300 ------------------VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-V-GIKCL-KNNAGLFCWM 358 (428)
T ss_dssp ------------------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBC-CCSSSSEEEE
T ss_pred ------------------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCccc-CCCeeEEEEE
Confidence 12233333333332 235677888888999999999999 5 88764 4434444432
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+....... . ....++.++|.++ |+.+.....+... .+++|++ ++ .++++++++++++|++++++
T Consensus 359 ~~~~~~~~~~---~-----~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis-~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 359 DLRPLLREST---F-----DSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVC-FA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp ECGGGCSSSS---H-----HHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEE-CS-SSCHHHHHHHHHHHHHHHHT
T ss_pred echhhcCCCc---h-----hHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE-Ee-cCCHHHHHHHHHHHHHHHhc
Confidence 2222110000 0 0123577888876 7544332222111 4699999 44 47999999999999988754
No 82
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=2.3e-26 Score=225.66 Aligned_cols=300 Identities=15% Similarity=0.174 Sum_probs=200.6
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .+++++|||+|+..++.++.-. ||+ .|+++..+|+++..++...|. +
T Consensus 39 ~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~-------------~gd-~Vi~~~~~~~~~~~~~~~~g~---~ 99 (373)
T 3frk_A 39 KKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIG-------------FGD-EVIVPSNTFIATALAVSYTGA---K 99 (373)
T ss_dssp HHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEETTSCTHHHHHHHHHSC---E
T ss_pred HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCC-------------CcC-EEEECCCCcHHHHHHHHHcCC---E
Confidence 34556688888886 5999999999999999876211 445 889999999999999999998 8
Q ss_pred eEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.++++ +++.+|+++|+++++++ +++|+ ++|++|.+.|+++|.++|+++|+++|+|++|+.+... +..
T Consensus 100 ~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~-~~~ 169 (373)
T 3frk_A 100 PIFVEPDIRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLY-KGM 169 (373)
T ss_dssp EEEECEETTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTE
T ss_pred EEEEeccccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEE-CCE
Confidence 8899987 56889999999998764 88887 5568999999999999999999999999999976652 211
Q ss_pred cCcccCCCCCCccceeC--ccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 274 RHPRLTGIERADSVTWN--PHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s--~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
.. +. ..|++++| .||+++++...|+++.++............... .. .+... ..+.++....
T Consensus 170 ~~----~~-~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~---~~----~~~~~----~~g~~~~~~~ 233 (373)
T 3frk_A 170 KV----GS-LGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGS---EK----KYHHI----YKGFNSRLDE 233 (373)
T ss_dssp ET----TS-SSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTC---SB----TTBCC----SCCCBCCCCH
T ss_pred ec----cc-cccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCc---cc----CCccc----cccccCCCCH
Confidence 11 11 36787777 669998634466666665544433221110000 00 00000 0111122233
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeE---EEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVN---VSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~---v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+.+++.....+++++..++..++++++.+.|.+ .+ +++...+.... +.|...... ..++
T Consensus 234 ~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~~~~~----------------~~~l 295 (373)
T 3frk_A 234 LQAGFLRVKLKYLDKWNEERRKIAQKYIAGINN-PN-VIIPVEADYAKHVWYTFVIRSEK----------------RDEL 295 (373)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCC-TT-EECCCCCTTEECCCSSEEEEESS----------------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc-eEeccCCCCCceeeEEEEEEeCC----------------HHHH
Confidence 333443334567788889999999999999998 66 76643332111 112111110 2456
Q ss_pred HHHHHhcccEEEeee--eeC-------------Cc-------ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 429 KGRMMQAGTMMVGYQ--PLN-------------DL-------PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~--~~~-------------~~-------~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.|.++|+.+.... +.. .. ...+|++ +++.+|++||++++++|++...
T Consensus 296 ~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~-~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 296 QKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIP-IWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp HHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHTCC-
T ss_pred HHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEcc-CCCCCCHHHHHHHHHHHHHHhh
Confidence 788888885432111 000 00 1689999 9999999999999999998754
No 83
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=2.2e-25 Score=222.61 Aligned_cols=314 Identities=12% Similarity=0.050 Sum_probs=211.0
Q ss_pred chhcChhhHHHHHHHHHHHHHHhC-----CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIG-----WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g-----~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
.|....+..+++ +.++++++ .++.++++|+|||+|+..++.++++ ||+ .|+++.++
T Consensus 91 ~y~~~~g~~~lr----~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~--------------~gd-~vl~~~p~ 151 (427)
T 3dyd_A 91 GYAPSIGFLSSR----EEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLAN--------------PGQ-NILVPRPG 151 (427)
T ss_dssp SCCCTTCCHHHH----HHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEEESC
T ss_pred CCCCCCCcHHHH----HHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcC--------------CCC-EEEEcCCC
Confidence 444444444544 44666666 5567899999999999999988753 445 78888899
Q ss_pred chhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 178 HYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 178 h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
|..+...+...|. +++.+|.++ ++.+|+++|++++++. +++|++++++|++|.+.| +++|.++|++
T Consensus 152 ~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 222 (427)
T 3dyd_A 152 FSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKILAVAAR 222 (427)
T ss_dssp CTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999998 788888763 5689999999998764 889999999999999999 9999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCc------hhhHhhhcCCcccccc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQD------GLLISCNQMSAEYLFM 325 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~------~~~~~~~~~~~~~l~~ 325 (480)
+|+++++|++|+++.............+.....+++.|++|.++.| .++|++++++. .+............
T Consensus 223 ~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~-- 300 (427)
T 3dyd_A 223 QCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRIL-- 300 (427)
T ss_dssp TTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHC--
T ss_pred CCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccC--
Confidence 9999999999998764322111000111111124566999986544 67899998864 22222111000000
Q ss_pred cccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 326 QDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
........++...+.....+.++++.++..++++++.+.|++ +|+++++ .|..+++++...
T Consensus 301 -----------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~p~~g~~~~~~l 361 (427)
T 3dyd_A 301 -----------------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA-IPGLRPV-RPSGAMYLMVGI 361 (427)
T ss_dssp -----------------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-STTEEEE-CCSBTTEEEEEE
T ss_pred -----------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc-CCCceec-CCCeeEEEEEec
Confidence 000012223334444445677888999999999999999999 8999875 455555554322
Q ss_pred cC-ccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 406 PT-RVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 406 ~~-~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+. ..... . ...++.++|. +.|+++.....+.. .+++|+++ . +++++|++++++|++++++
T Consensus 362 ~~~~~~~~--------~--~~~~~~~~l~~~~gV~v~~g~~~~~-~~~iRis~-~--~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 362 EMEHFPEF--------E--NDVEFTERLVAEQSVHCLPATCFEY-PNFIRVVI-T--VPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp CGGGCTTC--------S--SHHHHHHHHHHHHCEECEEGGGGTC-TTEEEEES-C--SCHHHHHHHHHHHHHHHHH
T ss_pred CHhhcCCC--------C--CHHHHHHHHHHHCCEEEECCcccCC-CCeEEEEE-C--CCHHHHHHHHHHHHHHHHH
Confidence 21 11000 0 0235566665 56644443322323 68999994 3 6899999999999988754
No 84
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.94 E-value=4.6e-25 Score=218.69 Aligned_cols=325 Identities=7% Similarity=-0.024 Sum_probs=218.7
Q ss_pred HHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCCC---CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGWQ---GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~~---~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...+... ...|...+...++++.+.+++.+.+|.+ ..++++|+|+|+|+..++.++..
T Consensus 65 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~------------- 131 (404)
T 2o1b_A 65 IIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN------------- 131 (404)
T ss_dssp HHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC-------------
Confidence 335555544321 2234333456788888888888888975 36899999999999999988743
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
||+ .|+++.++|+++..++...|. +++.+|.++ ++.+|+++|++++++. +++|++++++|++|.+.|
T Consensus 132 -~gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 132 -PGD-YVLLPDPGYTDYLAGVLLADG---KPVPLNLEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp -TTC-EEEEEESCCSSHHHHHHHTTC---EEEEEECCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCH
T ss_pred -CCC-EEEEcCCCchhHHHHHHHCCC---EEEEeccCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCH
Confidence 445 788888899999999998887 788899876 4568999999999765 899999999999999975
Q ss_pred --hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC
Q psy12303 243 --IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS 319 (480)
Q Consensus 243 --l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~ 319 (480)
+++|.++|++||+++++|++|+.+.........-.+.+..+.++++.|+||+++.| .++|+++. ++++........
T Consensus 201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~ 279 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG-NKDMIQALKKYQ 279 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEec-CHHHHHHHHHHH
Confidence 78899999999999999999998654221000001111114567888999999744 56898876 444444332111
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM 397 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~ 397 (480)
..+.. + ...+..+++...+ +.+.+++..++..++++++.+.|++ . ++++. ++..
T Consensus 280 ~~~~~-------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~ 335 (404)
T 2o1b_A 280 THTNA-------------------G--MFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAK-A-DLPFV-HAKG 335 (404)
T ss_dssp HHHCC-------------------C--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEE-CCCB
T ss_pred hhccC-------------------C--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-c-CCeec-CCCc
Confidence 00000 0 1222333333332 3566788888899999999999999 5 88875 4555
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
+.+++...+.... ..++.++|. +.|+.+.....+.. ..+++|+++. . ++++|+++++.|++
T Consensus 336 g~~~~~~~~~~~~--------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~--~~e~l~~~l~~l~~ 398 (404)
T 2o1b_A 336 GIYVWLETPPGYD--------------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA-L--DDQKLDEAAIRLTE 398 (404)
T ss_dssp SSEEEEECCTTCC--------------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC-S--CTTHHHHHHHHHHG
T ss_pred ceEEEEeCCCCCC--------------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc-C--CHHHHHHHHHHHHH
Confidence 5544322222111 235667766 45744433221211 1479999943 3 68899999999999
Q ss_pred hhcc
Q psy12303 476 LGHD 479 (480)
Q Consensus 476 ~~~~ 479 (480)
++++
T Consensus 399 ~l~~ 402 (404)
T 2o1b_A 399 LAYL 402 (404)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 8765
No 85
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.94 E-value=6.3e-25 Score=214.67 Aligned_cols=289 Identities=16% Similarity=0.117 Sum_probs=207.4
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|+++.++++|+|+|+|+..++.++.+ ||+ .|+++..+|.++...+...|. ++
T Consensus 69 ~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~--------------~gd-~vl~~~~~~~~~~~~~~~~g~---~~ 130 (365)
T 3get_A 69 ELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLN--------------SKN-AFLQAGVTFAMYEIYAKQCGA---KC 130 (365)
T ss_dssp HHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC--------------TTC-EEEECSSCCTHHHHHHHHHTC---EE
T ss_pred HHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhC--------------CCC-EEEEeCCChHHHHHHHHHcCC---EE
Confidence 567778899999878999999999999999887743 445 788999999999999999998 88
Q ss_pred EEeeC-CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHH--HcCcEEEeecccccccc--cc
Q psy12303 196 VEVPS-DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQ--KYNMWLHVDAAWGGGLL--LS 270 (480)
Q Consensus 196 ~~v~~-~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~--~~~~~l~vD~a~~~~~~--~~ 270 (480)
+.+|+ ++++ +|+++|+++++++ +++|++++++|++|.+.|++++.++++ ++|+++++|++|+.+.+ ..
T Consensus 131 ~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~ 203 (365)
T 3get_A 131 YKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDS 203 (365)
T ss_dssp EECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCG
T ss_pred EEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCC
Confidence 89998 6678 9999999999754 899999999999999999999999988 77999999999996652 11
Q ss_pred ccccCc-ccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYRHP-RLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~~~-~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
.....+ ...+..+.++++.|+||+++ .+.++|++++ +++...........|- ..
T Consensus 204 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~-----------------------~~ 259 (365)
T 3get_A 204 KKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPFN-----------------------VS 259 (365)
T ss_dssp GGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTTC-----------------------SC
T ss_pred cccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCCC-----------------------cC
Confidence 110000 00011145678889999997 4467898887 5555444322111110 12
Q ss_pred chHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 349 IFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 349 ~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
.+..++....+ ..+.+++..++..++++++.+.|++ . ++++. ++....+.+.+ +.. . ..+
T Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~-~~~~~~~~~~~-~~~-~--------------~~~ 320 (365)
T 3get_A 260 NLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKK-H-NIKII-DSYTNFITYFF-DEK-N--------------STD 320 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEC-CCSSSEEEEEC-SSS-C--------------HHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCEEC-CCCCeEEEEEC-CCC-C--------------HHH
Confidence 23333333333 2466788889999999999999999 5 88874 45554444432 211 1 245
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.+.|.++|+ .+.++...+ .+++|+++ + +++|++++++.|+++++
T Consensus 321 ~~~~l~~~gi-~v~~g~~~~-~~~iRis~-~---~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 321 LSEKLLKKGI-IIRNLKSYG-LNAIRITI-G---TSYENEKFFTEFDKILR 365 (365)
T ss_dssp HHHHHHTTTE-ECEECGGGT-CSEEEEEC-C---CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCE-EEEECccCC-CCEEEEEc-C---CHHHHHHHHHHHHHHhC
Confidence 6778888874 444433333 57999994 3 89999999999998753
No 86
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.94 E-value=4.2e-25 Score=217.56 Aligned_cols=309 Identities=15% Similarity=0.126 Sum_probs=213.7
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
.|....+..++.+++.+++.+..|. +++++++|+|||+|+..++.++.+ ||+ .|+++.++|++
T Consensus 63 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~--------------~gd-~Vlv~~p~y~~ 127 (385)
T 1b5p_A 63 KYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD--------------PGD-EVIVLSPYWVS 127 (385)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEEESCCTH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcC--------------CCC-EEEEcCCCchh
Confidence 4544445678888888999888785 456899999999999999987743 556 78888899999
Q ss_pred HHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCc
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNM 255 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~ 255 (480)
+...++..|. +++.+|.++ ++.+|+++|++++++. +++|++++++||||.+.+ +++|.++|++||+
T Consensus 128 ~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~ 198 (385)
T 1b5p_A 128 YPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDF 198 (385)
T ss_dssp HHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCC
Confidence 9999999988 889999874 5689999999988654 889999999999999866 8999999999999
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCccc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRY 334 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 334 (480)
++++|++|+.+....+....-.+.. +.++++.+++|+++.| ..+|+++++ +.+..........+.
T Consensus 199 ~li~De~~~~~~~~~~~~~~~~~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~-~~~~~~l~~~~~~~~----------- 264 (385)
T 1b5p_A 199 YLVSDEIYEHLLYEGEHFSPGRVAP--EHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSRQST----------- 264 (385)
T ss_dssp EEEEECTTTTCBSSSCCCCGGGTCT--TTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHTTT-----------
T ss_pred EEEEEccchhcccCCCCCCHHHcCC--CCEEEEEechhhcCCcccceEEEEeC-HHHHHHHHHHHhhcc-----------
Confidence 9999999997654211100001111 4467788999999854 458998864 444433221100000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCcc
Q psy12303 335 DTGDKVIQCGRHNDIFKLWLQWRAK-----GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 335 ~~~~~~~~~~r~~~~l~~~~~l~~~-----g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
.....+..+++...+ +.+.+++..++..++++++.+.|++ + |+++. +|..+.+.+...+..
T Consensus 265 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~~~~- 330 (385)
T 1b5p_A 265 ----------TSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA-L-GLKAV-RPSGAFYVLMDTSPI- 330 (385)
T ss_dssp ----------CSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCSBTTEEEEECTTT-
T ss_pred ----------CCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH-C-CCeec-CCCeeEEEEEecCCC-
Confidence 001223333333332 3456777888889999999999999 6 88764 455554444322210
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+ ..++.+.|.+.|+.+.....+ +..+++|+++. +++++|+++++.|++++++
T Consensus 331 -~~~-----------~~~l~~~l~~~gv~v~~g~~f-~~~~~iRis~~---~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 331 -APD-----------EVRAAERLLEAGVAVVPGTDF-AAFGHVRLSYA---TSEENLRKALERFARVLGR 384 (385)
T ss_dssp -CSS-----------HHHHHHHHHHTTEECEESGGG-TCTTEEEEECC---SCHHHHHHHHHHGGGGC--
T ss_pred -CCC-----------HHHHHHHHHHCCeEEeccccc-CCCCeEEEEec---CCHHHHHHHHHHHHHHHhh
Confidence 111 245677777777544433222 22579999943 7899999999999887653
No 87
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.94 E-value=1.5e-24 Score=212.80 Aligned_cols=322 Identities=13% Similarity=0.063 Sum_probs=216.1
Q ss_pred HHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCCC--CC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGWQ--GG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~~--~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...+... ...|...+...++++.+.+++.+.+|.+ +. ++++|+|+|+|+..++.++.+
T Consensus 43 v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~------------- 109 (376)
T 2dou_A 43 PLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE------------- 109 (376)
T ss_dssp HHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcC-------------
Confidence 335555554321 2334333456678888888887777985 34 899999999999999987743
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
||+ .|++..++|+++...+...|. +++.+|.++++.+|+++|++++++. +++|++++++|++|.+.|
T Consensus 110 -~gd-~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~ 178 (376)
T 2dou_A 110 -PED-LLLLPEVAYPSYFGAARVASL---RTFLIPLREDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVADWG 178 (376)
T ss_dssp -TTC-EEEEESSCCHHHHHHHHHTTC---EEEEECBCTTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHH
T ss_pred -CCC-EEEECCCCcHhHHHHHHHcCC---EEEEeeCCCCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccCCHH
Confidence 445 788888999999999999887 7888888545678999999999765 899999999999999976
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA 320 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~ 320 (480)
+++|.++|++||+++|+|++|+.+.........-...+..+.++++.+++|+++.| .++|+++. +++..........
T Consensus 179 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~ 257 (376)
T 2dou_A 179 YFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG-SEEALARLERVKG 257 (376)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEec-CHHHHHHHHHHHH
Confidence 68899999999999999999998764221100001111124567888999999743 56888875 4444443321111
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
.+.. + ...+...++...+ +.+.+++..++..++++++.+.|++ . +++. ++..+
T Consensus 258 ~~~~-------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~--~~~~-~~~~~ 312 (376)
T 2dou_A 258 VIDF-------------------N--QYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG-V--LSLL-PPRAT 312 (376)
T ss_dssp HHCC-------------------C--SCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT-T--SEEC-CCCBS
T ss_pred hccc-------------------C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-h--cCcc-CCCee
Confidence 0000 0 1122223333333 3567788888999999999999999 5 7764 45555
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.+++...+.... ..++.+.|.++|+.+.....+.. ..+++|+++ +. ++++|+++++.|++++
T Consensus 313 ~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~-~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 313 MYLWGRLPEGVD--------------DLEFGLRLVERGVALAPGRGFGPGGKGFVRIAL-VR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp SEEEEECCTTCC--------------HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEEC-CS--CHHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCCC--------------HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEe-cC--CHHHHHHHHHHHHHHh
Confidence 544322222111 23567788888754433222211 147999994 33 7999999999998865
No 88
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=7.4e-25 Score=216.25 Aligned_cols=323 Identities=14% Similarity=0.104 Sum_probs=216.3
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|....+..++++++.+++.+.+|. ++.++++|+|||+|+..++.++..
T Consensus 46 ~~~v~-~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~----------- 113 (391)
T 3h14_A 46 PRGAV-EALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFD----------- 113 (391)
T ss_dssp CHHHH-HHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC-----------
T ss_pred CHHHH-HHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcC-----------
Confidence 34343 5555555443445555555678888989999888884 567899999999999999888753
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
||+ .|+++.++|.++...+..+|. +++.+|.+++ +.+|+++|+++ + +++|++++++|++|.+
T Consensus 114 ---~gd-~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~ 177 (391)
T 3h14_A 114 ---SGD-RVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTM 177 (391)
T ss_dssp ---TTC-EEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCC
T ss_pred ---CCC-EEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCcc
Confidence 445 788888999999999999988 8889998764 57899999876 2 7899999999999999
Q ss_pred cC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhh
Q psy12303 241 DP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 241 ~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~ 316 (480)
.| +++|.++|++||+++|+|++|+.+....... ........++++.+++|+++ .+.++|+++.++ .......
T Consensus 178 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~~~~~ 253 (391)
T 3h14_A 178 LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV---TALELTDECYVINSFSKYFSMTGWRVGWMVVPE-DQVRVVE 253 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC---CGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG-GGHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc---ChhhcCCCEEEEEechhccCCccceeEEEEeCH-HHHHHHH
Confidence 87 8899999999999999999999766432211 11112245677779999997 556788888654 3333321
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
.....+. .....+..++++..+ +.+.+++..++..++++++.+.|++ . ++..+.+|
T Consensus 254 ~~~~~~~---------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~-~~~~~~~~ 310 (391)
T 3h14_A 254 RIAQNMF---------------------ICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPK-A-GFTRIAPP 310 (391)
T ss_dssp HHHHHTT---------------------CCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCBCCC
T ss_pred HHHhhhc---------------------cCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCCcccCC
Confidence 1100000 001223333332222 5677888899999999999999998 5 54443456
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLT 471 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~ 471 (480)
..+.+.+...+.. +.+ ..++.++|.++ |+. +.++...+ ..+++|+++. . ++++|+++++
T Consensus 311 ~~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~iRis~~-~--~~~~i~~~l~ 373 (391)
T 3h14_A 311 DGAFYVYADVSDL--TDD-----------SRAFAAEILEKAGVA-VTPGLDFDPERGAGTLRFSYA-R--ATADIEEGLD 373 (391)
T ss_dssp CBTTEEEEECTTT--CSC-----------HHHHHHHHHHHHCEE-CEEGGGTCTTTGGGEEEEECC-S--CHHHHHHHHH
T ss_pred CeeEEEEEecCcc--CCC-----------HHHHHHHHHHHCCEE-EcCchhhCCCCCCCeEEEEec-C--CHHHHHHHHH
Confidence 6555544333221 000 23566777665 744 44322222 1579999943 3 7899999999
Q ss_pred HHHHhhcc
Q psy12303 472 EMDRLGHD 479 (480)
Q Consensus 472 ~l~~~~~~ 479 (480)
+|++++++
T Consensus 374 ~l~~~~~~ 381 (391)
T 3h14_A 374 RLEAFMQA 381 (391)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 89
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.94 E-value=1.5e-26 Score=225.51 Aligned_cols=340 Identities=11% Similarity=-0.020 Sum_probs=215.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcC--cCC-cc---hhcChhhHHHHHHHHHHHHHHhCCCC-CCeEE-CCChhHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATAN--TNM-FT---YEIAPVFILMETVVLEKMRQIIGWQG-GDSIL-APGGSISNLYA 145 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~-~~---~~~~~~~~~~e~~~~~~la~~~g~~~-~~~~~-t~ggt~a~~~a 145 (480)
.|+.+..+.+.++.++..+...+.+ .++ .. ...++.+.++.+++++.+++++|+++ .+++| |+|||+|+..+
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a 107 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGV 107 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHH
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHH
Confidence 5666666666777776443322211 111 11 11234455666788999999999965 46888 69999999999
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCC-CCHHHHHHHHHHHHHCC
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGR-LIPSELERLVLERKAKG 222 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~-~d~~~L~~~i~~~~~~~ 222 (480)
+..... +|+ .+++....|++.. ....+...+ ++..+|++ ++|. +++++++++++++
T Consensus 108 i~~l~~--------------~gd-~v~~~~~~~~~~~-~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~---- 166 (386)
T 3qm2_A 108 PLNLLG--------------DKT-TADYVDAGYWAAS-AIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDN---- 166 (386)
T ss_dssp HHHHCT--------------TCC-EEEEEESSHHHHH-HHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTT----
T ss_pred HHhccC--------------CCC-eEEEEeCCHHHHH-HHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCC----
Confidence 876632 345 3333333555542 233332223 58888888 5665 7888888777665
Q ss_pred CccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccc
Q psy12303 223 DIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQC 301 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~ 301 (480)
|++|.+++.+|.+|.+ .|+++|. +|+++|||++++.+..+++..++ + ++++++|||++ |.|+
T Consensus 167 --t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-------~--~~~~s~hK~lG-P~G~ 229 (386)
T 3qm2_A 167 --AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-------G--VIYAGAQKNIG-PAGL 229 (386)
T ss_dssp --CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-------S--EEEEETTTTTC-CTTE
T ss_pred --CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-------C--EEEEecccccC-CCcc
Confidence 8899999999999995 9999986 89999999999999998887655 4 56688999996 9999
Q ss_pred eEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHH
Q psy12303 302 STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVK 380 (480)
Q Consensus 302 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~ 380 (480)
|+++++++. +.......+.++...... .....+++.. -....++..+++.+... |++++.++..++++++.+
T Consensus 230 g~l~v~~~~-~~~~~~~~p~~~~~~~~~-~~~~~~gTp~-----v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~ 302 (386)
T 3qm2_A 230 TLVIVREDL-LGKAHESCPSILDYTVLN-DNDSMFNTPP-----TFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYG 302 (386)
T ss_dssp EEEEEEGGG-CSCCCTTSCGGGCHHHHH-HC-------C-----CSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHH-HhhhcccCCcHHHHHHHh-hcCCCCCCCc-----HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999998753 222222222222100000 0000011111 12345666677766667 899999999999999999
Q ss_pred HHhcCCCCe-EEecCC--ce-eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEec
Q psy12303 381 KIKSMPDKF-YLILEP--EM-VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNII 456 (480)
Q Consensus 381 ~l~~~~~g~-~~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~ 456 (480)
.|++ + ++ ....++ .+ .+++|.+.... + ...+...|.+.|+. +.. .... .+.+|+|
T Consensus 303 ~l~~-~-~~~~~~~~~~~rs~~iv~f~~~~~~------------~---~~~~~~~L~~~gI~-~~~-g~~~-~~~iRiS- 361 (386)
T 3qm2_A 303 VIDN-S-DFYRNDVAQANRSRMNVPFQLADNT------------L---DKVFLEESFAAGLH-ALK-GHRV-VGGMRAS- 361 (386)
T ss_dssp HHHT-C-SSEECCBCGGGBCSSEEEEEESSGG------------G---HHHHHHHHHHTTEE-CCB-CCTT-TCSEEEE-
T ss_pred HHHH-C-CCcccCCCHHHcCceEEEEECCCcc------------c---cHHHHHHHHHCCCE-EeC-CCCC-cCeEEEE-
Confidence 9999 5 55 332222 22 46777653211 1 12445567777743 222 1122 2469999
Q ss_pred ccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 457 SSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 457 ~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++.++|++|||++++.|+++.++
T Consensus 362 ~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 362 IYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 78899999999999999998753
No 90
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=1.6e-25 Score=220.15 Aligned_cols=316 Identities=12% Similarity=0.052 Sum_probs=210.0
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL 169 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~ 169 (480)
.+.+...+.. ...|....... ++++.+++++|.+++++++|+|||+|+..++.++.. ||+
T Consensus 44 ~~a~~~~~~~-~~~y~~~~~~~----~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~--------------~gd- 103 (381)
T 1v2d_A 44 LEAVRRALGR-QDQYAPPAGLP----ALREALAEEFAVEPESVVVTSGATEALYVLLQSLVG--------------PGD- 103 (381)
T ss_dssp HHHHHHHTTT-SCSCCCTTCCH----HHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCC--------------TTC-
T ss_pred HHHHHHHHHH-hcCCCCCCCCH----HHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCC--------------CCC-
Confidence 3555554443 22343332333 455667788999877899999999999999988743 445
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCC---CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---h
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD---KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---I 243 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~---~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l 243 (480)
.|+++..+|+++...++..|. +++.+|.+ +++.+|+++|+++++++ +++|++++++|++|.+.| +
T Consensus 104 ~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l 174 (381)
T 1v2d_A 104 EVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGEREL 174 (381)
T ss_dssp EEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCccCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHH
Confidence 788888999999999999888 78889987 56789999999988643 899999999999999976 8
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
++|.++|++||+++|+|++|+.+.+ ...... ...-..+.|+++.++||+++.| ..+|++++++ +......... .+
T Consensus 175 ~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~-~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~-~~ 250 (381)
T 1v2d_A 175 EAIARLARAHDLFLISDEVYDELYY-GERPRR-LREFAPERTFTVGSAGKRLEATGYRVGWIVGPK-EFMPRLAGMR-QW 250 (381)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBS-SSCCCC-HHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCT-TTHHHHHHHH-HH
T ss_pred HHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHhcCCCEEEEeechhhcCCcccceEEEEeCH-HHHHHHHHHH-hh
Confidence 9999999999999999999998754 111000 1000226899999999998744 4589988754 3433321100 00
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS 401 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~ 401 (480)
.. + +.......++..++.... .++++++.++..++++++.+.|++ .|++++. +..+.++
T Consensus 251 ~~--------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~-~~~~~~~ 310 (381)
T 1v2d_A 251 TS--------------F---SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA--MGLRVYV-PEGTYFL 310 (381)
T ss_dssp HT--------------S---SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH--TTCCEEC-CSBSSEE
T ss_pred cc--------------c---CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH--CCCEecC-CCcceEE
Confidence 00 0 000011122223333211 456778889999999999999999 5888864 4444443
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+...+.. ++...+.+.|+.+.....+. ...+++|+++ .. ++++|+++++.|+++++
T Consensus 311 ~~~~~~~------------------~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~-~~--~~~~i~~~~~~l~~~l~ 369 (381)
T 1v2d_A 311 MAELPGW------------------DAFRLVEEARVALIPASAFYLEDPPKDLFRFAF-CK--TEEELHLALERLGRVVN 369 (381)
T ss_dssp EEECTTC------------------CHHHHHHHTCEECEEGGGGCSSSCCTTEEEEEC-CS--CHHHHHHHHHHHHHHC-
T ss_pred EEecChH------------------hHHHHHHhCCEEEecchHhCCCCCCCCEEEEEe-CC--CHHHHHHHHHHHHHHHh
Confidence 3222211 03345566775443322221 1157999994 33 89999999999998875
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 370 ~ 370 (381)
T 1v2d_A 370 S 370 (381)
T ss_dssp -
T ss_pred h
Confidence 4
No 91
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.94 E-value=1.5e-24 Score=212.83 Aligned_cols=323 Identities=10% Similarity=0.041 Sum_probs=219.1
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
++.+. +.+...+......|.. .. .++++.+.+++.+.+|. ++.++++|+|||+|+..++.++..
T Consensus 38 ~~~v~-~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~----------- 103 (377)
T 3fdb_A 38 CPAVL-QAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTP----------- 103 (377)
T ss_dssp CHHHH-HHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC-----------
T ss_pred CHHHH-HHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcC-----------
Confidence 34444 4444444333334443 33 67788888888887774 567899999999999999987753
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|+++..+|.++...+...|. +++.+|.+++ +|+++|+++++++ +++|++++++|++|.+.|
T Consensus 104 ---~gd-~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~--~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 104 ---AQS-KVIVPTPAYPPFFHLLSATQR---EGIFIDATGG--INLHDVEKGFQAG------ARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp ---TTC-CEEEEESCCTHHHHHHHHHTC---CEEEEECTTS--CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCC
T ss_pred ---CCC-EEEEcCCCcHhHHHHHHHcCC---EEEEccCCCC--CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCC
Confidence 445 678888899999999999998 8899999876 9999999999875 789999999999999975
Q ss_pred ---hHHHHHHHHHcCcEEEeecccccccccc-ccccCcccCCC--CCCccceeCccccCCC-cccceEEEEeCchhhHhh
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLS-KKYRHPRLTGI--ERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISC 315 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~-~~~~~~~~~~~--~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~ 315 (480)
+++|.++|++||+++|+|++|+.+.... ... . .+..+ .+.++++.+++|+++. +.++|++++.++......
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~-~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~ 246 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTV-A-AGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHW 246 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCC-G-GGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCc-c-cHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHH
Confidence 6777777999999999999999865433 111 0 11111 1334778899999964 357888877676655543
Q ss_pred hcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 316 NQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 316 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
..... +... ....+..+++...+ +.+.++++.++..++++++.+.|++++|+++++
T Consensus 247 ~~~~~-~~~~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 304 (377)
T 3fdb_A 247 QQLSP-VIKD--------------------GASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKIT- 304 (377)
T ss_dssp HHSCH-HHHC--------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEC-
T ss_pred HHHHH-hhcC--------------------CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEe-
Confidence 32111 1000 01223333333222 356678888999999999999998734799885
Q ss_pred CCceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHH
Q psy12303 394 EPEMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 394 ~~~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~ 469 (480)
.+..+.+.+...+. ... .++...+.++ |+ .+.++...+ ..+++|+++. +++++|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~gi-~v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~ 365 (377)
T 3fdb_A 305 PMQATYLMWIDFRDTTIE---------------GSPSEFFIEKAKV-AMNDGAWFGEDGTGFCRLNFA---TSREVLEEA 365 (377)
T ss_dssp CCSBCSEEEEECTTSCCC---------------SCHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEECC---SCHHHHHHH
T ss_pred cCCeeEEEEEECcccCCC---------------HHHHHHHHHhCCE-EecCChhccCCCCCEEEEEeC---CCHHHHHHH
Confidence 45555554322222 111 1244555555 64 444332222 1579999943 489999999
Q ss_pred HHHHHHhhcc
Q psy12303 470 LTEMDRLGHD 479 (480)
Q Consensus 470 ~~~l~~~~~~ 479 (480)
+++|++++++
T Consensus 366 l~~l~~~l~~ 375 (377)
T 3fdb_A 366 IDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 92
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=3.2e-25 Score=221.66 Aligned_cols=337 Identities=12% Similarity=0.057 Sum_probs=220.3
Q ss_pred HHHHHHHHcCc---CCcchhcChhhHHHHHHHHHHHHHHhCC--CCC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 89 AGEWLIATANT---NMFTYEIAPVFILMETVVLEKMRQIIGW--QGG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 89 ~~~~l~~~~~~---~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
+.+.+...+.. ....|....+..++++++.+++.+.+|. +++ ++++|+|||+|+..++.++..
T Consensus 55 v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~----------- 123 (429)
T 1yiz_A 55 ALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVD----------- 123 (429)
T ss_dssp HHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcC-----------
Confidence 33555554443 2234444445678888999999888885 456 899999999999999988743
Q ss_pred CccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC----------CCCCCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 163 SAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK----------RGRLIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 163 ~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~----------~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
||+ .|+++.+.|+++...+...|. +++.+|.+. ++.+|+++|++++++. +++|++++
T Consensus 124 ---~gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~ 190 (429)
T 1yiz_A 124 ---EGD-EVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIIINT 190 (429)
T ss_dssp ---TTC-EEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEEES
T ss_pred ---CCC-EEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEECC
Confidence 445 788888899999999998887 788888865 3579999999988643 89999999
Q ss_pred CCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCCc-ccceEEEEe
Q psy12303 233 GTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGTL-LQCSTIHFK 307 (480)
Q Consensus 233 ~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~ 307 (480)
++|++|.+.| +++|.++|++||+++|+|++|+++.+....... ..+.+..+.|+++.++||+++.| ..+|+++++
T Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~ 270 (429)
T 1yiz_A 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP 270 (429)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESC
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeC
Confidence 9999999975 999999999999999999999986542211100 01111236789999999999833 458998875
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh----c--HHHHHHHHHHHHHHHHHHHHH
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK----G--DEGFEKQIDRLMELAEYMVKK 381 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~----g--~~~~~~~~~~~~~l~~~l~~~ 381 (480)
++......... .+. .+ +.......++..+++.. + .+.+++..++..++++++.+.
T Consensus 271 -~~~~~~l~~~~-~~~--------------~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (429)
T 1yiz_A 271 -EALLKNLQMVH-QNC--------------VY---TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASF 331 (429)
T ss_dssp -HHHHHHHHHHH-HTT--------------TC---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHH-hhc--------------cc---CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44443322110 000 00 00001122233334331 2 445778888899999999999
Q ss_pred HhcCCCCeEEecCCceeE-EEEEeecCccCCC--chhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC------cccE
Q psy12303 382 IKSMPDKFYLILEPEMVN-VSFWYLPTRVRNM--PHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND------LPNF 451 (480)
Q Consensus 382 l~~~~~g~~~~~~~~~~~-v~f~~~~~~~~~~--~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~------~~~~ 451 (480)
|++ . ++++.. |..+. +++.+ +...... .... .... ..++.++|. +.|+.+.....+.. ..++
T Consensus 332 L~~-~-g~~~~~-~~~g~~~~~~~-~~~~~~~~~~~~~--~~~~--~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~ 403 (429)
T 1yiz_A 332 LAE-V-GMNPTV-PQGGYFMVADW-SSLDSKVDLTQET--DARK--DYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDF 403 (429)
T ss_dssp HHH-H-TCEEEE-CSBSSEEEEEC-CSSCTTTTCCSSS--SSCH--HHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTE
T ss_pred HHh-C-CCcccC-CCcceEEEEEc-ccccccccccccc--cCCC--HHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCe
Confidence 998 5 888764 44443 44433 2210000 0000 0000 235667676 56744332212211 1469
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 452 FRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 452 ~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+|+++. +++++|++++++|+++++.
T Consensus 404 iRis~~---~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 404 VRYCFF---KKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp EEEECC---SCHHHHHHHHHHHHHHSCC
T ss_pred EEEEec---CCHHHHHHHHHHHHHhccC
Confidence 999943 4899999999999998764
No 93
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=7.6e-25 Score=218.14 Aligned_cols=321 Identities=12% Similarity=0.101 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.++.+++++.+++++|.+ ..++++|||+|+..++.++.-. ||+ .|+++..+|+++..++...|.
T Consensus 41 ~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~-------------~gd-~Vl~~~~~~~~~~~~~~~~g~ 104 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIG-------------EGD-EVIVPSLTWIATATAVLNVNA 104 (418)
T ss_dssp CCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC-------------CcC-EEEECCCccHhHHHHHHHcCC
Confidence 455667788899999997 4788999999999999876211 445 788999999999999999888
Q ss_pred CCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 191 GTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 191 ~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+++.+++++ ++.+|+++|+++++++ +++|++++ ++|...++++|.++|+++|+++|+|++|+.+...
T Consensus 105 ---~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~ 172 (418)
T 2c81_A 105 ---LPVFVDVEADTYCIDPQLIKSAITDK------TKAIIPVH---LFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVW 172 (418)
T ss_dssp ---EEEEECBCTTTCSBCHHHHGGGCCTT------EEEECCBC---CTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE
T ss_pred ---EEEEEecCCCCCCcCHHHHHHhhCCC------CeEEEEeC---CcCCcccHHHHHHHHHHCCCEEEEECcccccCcc
Confidence 888999886 7899999999998754 88888754 6899999999999999999999999999988632
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccc--cCcccC--CCC-ccccCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL--YDVRYD--TGD-KVIQCG 344 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~--~~~-~~~~~~ 344 (480)
... . ......+++.++++||+++.+ .+|+++.+++.+.................. ....+. .+. ..+..+
T Consensus 173 ~~~-~---~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (418)
T 2c81_A 173 NNQ-R---AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSN 247 (418)
T ss_dssp TTE-E---TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCB
T ss_pred CCE-e---cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcC
Confidence 111 1 111123566666669999873 667777655554433221111000000000 000000 000 001111
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce-e-----EEEEEeecCccCCCchhhHH
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM-V-----NVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~-~-----~v~f~~~~~~~~~~~~~~~~ 418 (480)
.+...+..+..+.. .+.+++..++..++++++.+.|.+ ++++++..++.. + ++.+.+......+.+
T Consensus 248 ~~~~~~~aa~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 319 (418)
T 2c81_A 248 YCLSEFQSAILLDQ--LQELDDKNAIREKNAMFLNDALSK-IDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLN----- 319 (418)
T ss_dssp CCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTT-STTEEECCCCTTEEECCCSEEEEEECGGGTTTCC-----
T ss_pred CCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-CCCcccCCCCCCCcccccEEEEEEEccccccccC-----
Confidence 22233333333222 445778888889999999999999 889998755543 1 232433210000111
Q ss_pred HHhhhhhHHHHHHHHhc-ccE---EEeee-ee---------------------------CCc-------ccEEEEecccC
Q psy12303 419 NILGEITPILKGRMMQA-GTM---MVGYQ-PL---------------------------NDL-------PNFFRNIISSA 459 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~-g~~---~~~~~-~~---------------------------~~~-------~~~~R~~~~~~ 459 (480)
..++.+.|.++ |+. ..... +. ... ...+|++ +++
T Consensus 320 ------~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~-~~~ 392 (418)
T 2c81_A 320 ------ADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIH-HAI 392 (418)
T ss_dssp ------HHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEE-GGG
T ss_pred ------HHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEec-CCc
Confidence 23566777777 754 32211 00 000 2589999 889
Q ss_pred CC-CHHHHHHHHHHHHHhhcc
Q psy12303 460 AV-TEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 460 ~~-t~~di~~~~~~l~~~~~~ 479 (480)
.+ |++||++++++|++++++
T Consensus 393 ~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 393 LLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp GGSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHHh
Confidence 99 999999999999998765
No 94
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=3.6e-25 Score=217.19 Aligned_cols=306 Identities=11% Similarity=0.074 Sum_probs=207.7
Q ss_pred cchhcChhhHHHHHHHHHHHHHHh-CCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQII-GWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS 180 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~-g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s 180 (480)
..|...++..++++. +++++ +.++.++++|+|||+|+..++.++.. ||+ .|+++.++|.+
T Consensus 57 ~~y~~~~g~~~l~~~----la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~--------------~gd-~Vl~~~~~~~~ 117 (375)
T 3op7_A 57 LNYGWIEGSPAFKKS----VSQLYTGVKPEQILQTNGATGANLLVLYSLIE--------------PGD-HVISLYPTYQQ 117 (375)
T ss_dssp CSSCCTTCCHHHHHH----HHTTSSSCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEEESSCTH
T ss_pred cCCCCCCChHHHHHH----HHHHhccCChhhEEEcCChHHHHHHHHHHhcC--------------CCC-EEEEeCCCchh
Confidence 445444445555555 66655 46667899999999999999988753 555 78888899999
Q ss_pred HHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCc
Q psy12303 181 VRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNM 255 (480)
Q Consensus 181 ~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~ 255 (480)
+...+...|. +++.+|++. ++.+|+++|+++++++ +++|++++++|++|.+.| +++|.++|++||+
T Consensus 118 ~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~ 188 (375)
T 3op7_A 118 LYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIASEVGA 188 (375)
T ss_dssp HHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999988 788888763 4568999999999754 889999999999999999 9999999999999
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCccc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRY 334 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 334 (480)
++++|++|+.+... +. . ......+.++++.+++|.++. +.++|+++. ++++.+........+..
T Consensus 189 ~li~De~~~~~~~~-~~-~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~---------- 253 (375)
T 3op7_A 189 YILSDEVYRSFSEL-DV-P--SIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMI---------- 253 (375)
T ss_dssp EEEEECCSCCCSSS-CC-C--CHHHHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTS----------
T ss_pred EEEEEccccccccc-CC-C--chhhhcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhcc----------
Confidence 99999999986543 11 0 111111445778889999984 356788886 55555544321111000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 335 DTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 335 ~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
++.......+...+.. ..+.+++..++..++++++.+.|++ .+++.++ .|..+.+.|...+....
T Consensus 254 --------~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~---- 318 (375)
T 3op7_A 254 --------CAGVFDDLVAQLALAH-YQEILERNRHILEENLAILDQWIEE-EPLVSYI-RPAVVSTSFVKIAVDMP---- 318 (375)
T ss_dssp --------CCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHH-CTTEEEC-CCSSSSCEEEEECCSSC----
T ss_pred --------CCCcHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHhh-CCCceEe-cCCCeEEEeEEcCCCCC----
Confidence 0000112222233332 2345666777778899999999999 8899875 44444444433332211
Q ss_pred hhHHHHhhhhhHHHHHHH-HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 415 EKRLNILGEITPILKGRM-MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l-~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+++ .+.|+.+.....+.. .+++|+++. .+.++|++++++|++++++
T Consensus 319 ----------~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~---~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 319 ----------MEDFCLQLLQEHGVLLVPGNRFER-DGYVRLGFA---CEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp ----------HHHHHHHHHHHHCEECEEGGGGTC-TTEEEECCC---SCHHHHHHHHHHHHHHHGG
T ss_pred ----------HHHHHHHHHHhCCEEEeChhhhCC-CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 23455666 466754433322222 579999943 3559999999999988764
No 95
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.7e-24 Score=213.44 Aligned_cols=308 Identities=14% Similarity=0.081 Sum_probs=202.0
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.+. .+++++||+|+..++.++.-. ||+ .|+++..+|+++..++...|. ++
T Consensus 42 ~l~~~la~~~~~~~--~i~~~sGt~al~~~l~~l~~~-------------~gd-~Vi~~~~~~~~~~~~~~~~g~---~~ 102 (388)
T 1b9h_A 42 SFEREFAAHHGAAH--ALAVTNGTHALELALQVMGVG-------------PGT-EVIVPAFTFISSSQAAQRLGA---VT 102 (388)
T ss_dssp HHHHHHHHHTTCSE--EEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCTHHHHHHHHTTC---EE
T ss_pred HHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHcCCC-------------CcC-EEEECCCccHHHHHHHHHcCC---EE
Confidence 45566888888863 455556699999998876211 445 788999999999999999988 88
Q ss_pred EEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 196 VEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 196 ~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
+.++++++ +.+|+++|+++++++ +++|+ ++|++|.+.|+++|.++|++||+++|+|++|+.+......
T Consensus 103 ~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~-- 171 (388)
T 1b9h_A 103 VPVDVDAATYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGK-- 171 (388)
T ss_dssp EEECBCTTTCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE--
T ss_pred EEEecCCCcCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCe--
Confidence 99999864 889999999998654 77777 7888999999999999999999999999999976543211
Q ss_pred CcccCCCCCCccceeCccccCCCcccceEEEEeCchh--hHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGL--LISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
.+.....+++.++|.||+++++ .+|+++.++... ......... + +.... ...+.. .....+.+...+.+
T Consensus 172 --~~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~--~~~g~~~~~~~~~~ 242 (388)
T 1b9h_A 172 --RVGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHS-C--GRPRD-DRRYFH--KIAGSNMRLNEFSA 242 (388)
T ss_dssp --EGGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTB-T--TCCTT-CSSCCC--CSCCCBCBCBHHHH
T ss_pred --ecccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHHh-C--CCCcc-Ccccee--ecccccCCcCHHHH
Confidence 1111114677777888999864 567777766544 333221110 0 00000 000000 00001112334444
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-----Cc-eeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-----PE-MVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-----~~-~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
++.+.. .+.+++.+++..++++++.+.|++ ++++++..+ +. ...+++.+ +.. .. .+ ..
T Consensus 243 a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~------~~--~~ 306 (388)
T 1b9h_A 243 SVLRAQ--LARLDEQIAVRDERWTLLSRLLGA-IDGVVPQGGDVRADRNSHYMAMFRI-PGL----TE------ER--RN 306 (388)
T ss_dssp HHHHHH--HTTHHHHHHHHHHHHHHHHHHHHT-STTCEECCCCTTCCBCCCSEEEEEC-TTC----CH------HH--HH
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCcCCCccceEEEEEEe-CCc----Cc------cc--HH
Confidence 443333 445677888888999999999999 889988652 22 23444433 210 00 00 24
Q ss_pred HHHHHHHhcccEEEeee-eeC--------------------C-------cccEEEEecccCCC-CHHHHHHHHHHHHHhh
Q psy12303 427 ILKGRMMQAGTMMVGYQ-PLN--------------------D-------LPNFFRNIISSAAV-TEGDIDFLLTEMDRLG 477 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~-~~~--------------------~-------~~~~~R~~~~~~~~-t~~di~~~~~~l~~~~ 477 (480)
++.+.|.+.|+.+.... +.. . ....+|++ ++..+ |++||+++++.|+++.
T Consensus 307 ~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~~~~~~t~edi~~~~~~l~~~~ 385 (388)
T 1b9h_A 307 ALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLH-HRVLLAGEPELHATAEIIADAV 385 (388)
T ss_dssp HHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEE-GGGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEec-CCCCCCCHHHHHHHHHHHHHHH
Confidence 56778888886543211 100 0 02469999 88888 9999999999999987
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 386 ~~ 387 (388)
T 1b9h_A 386 AR 387 (388)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 96
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.94 E-value=3.3e-25 Score=219.30 Aligned_cols=311 Identities=13% Similarity=0.075 Sum_probs=211.6
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h 178 (480)
..|....+..++.+++.+++.+.+|. +++++++|+|+|+|+..++.++.. || + .|++..++|
T Consensus 70 ~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~--------------~g~d-~vl~~~p~~ 134 (398)
T 3ele_A 70 HGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTS--------------DAYD-EFITIAPYF 134 (398)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--------------STTC-EEEEESSCC
T ss_pred CCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcC--------------CCCC-EEEEeCCCc
Confidence 34444555678899999999999885 567899999999999999988753 55 4 788888999
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH--
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK-- 252 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~-- 252 (480)
+++...+...|. +++.+|.++ ++.+|+++|+++++++ +++|++++++||+|.+.| +++|.++|++
T Consensus 135 ~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 205 (398)
T 3ele_A 135 PEYKVFVNAAGA---RLVEVPADTEHFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKS 205 (398)
T ss_dssp THHHHHHHHTTC---EEEEECCCTTTSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHcCC---EEEEEecCCcCCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhh
Confidence 999999999988 889999875 5689999999998754 899999999999999988 6777789999
Q ss_pred ----cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhH-hhhcCCccccccc
Q psy12303 253 ----YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLI-SCNQMSAEYLFMQ 326 (480)
Q Consensus 253 ----~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~-~~~~~~~~~l~~~ 326 (480)
||+++|+|++|+.+........ ......+.++++.+++|+++ .+.++|++++++..... ........+....
T Consensus 206 ~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (398)
T 3ele_A 206 KEIGRPIFIIADEPYREIVYDGIKVP--FVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRAL 283 (398)
T ss_dssp HHHTSCCEEEEECTTTTCBCTTCCCC--CGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHT
T ss_pred hccCCCeEEEEeccccccccCCCCcC--ChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhc
Confidence 9999999999998654321111 11122255688889999998 55789999876652110 0000000000000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeec
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~ 406 (480)
+ ......+..++....+... ...++..++++++.+.|++ . ++++. .|..+.+.+...+
T Consensus 284 ----------~------~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~~ 341 (398)
T 3ele_A 284 ----------G------YVCAPSLFQKMIVKCQGAT---GDINAYKENRDLLYEGLTR-I-GYHCF-KPDGAFYMFVKAL 341 (398)
T ss_dssp ----------T------CCCSCHHHHHHHTTCTTCC---CCHHHHHHHHHHHHHHHHH-H-TCCEE-CCSBSSEEEEECS
T ss_pred ----------c------ccCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHH-c-CCeec-CCCeeEEEEEEcC
Confidence 0 0001122333332222111 1346677888899999998 4 77775 4555553332222
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.. . ..++.+.|.+.|+.+... ...+..+++|+++ . +++++|++++++|++++++
T Consensus 342 ~~-~--------------~~~~~~~l~~~gi~v~~g-~~~~~~~~iRis~-~--~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 342 ED-D--------------SNAFCEKAKEEDVLIVAA-DGFGCPGWVRISY-C--VDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp SS-C--------------HHHHHHHHHTTTEECEES-GGGTCTTEEEEEC-C--SCHHHHHHHHHHHHHHHHH
T ss_pred CC-C--------------HHHHHHHHHHCCEEEeCc-cccCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHH
Confidence 11 0 235667787888544433 3222257999994 3 6999999999999988764
No 97
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.94 E-value=2.6e-25 Score=219.93 Aligned_cols=299 Identities=14% Similarity=0.084 Sum_probs=200.6
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++.+++++|.+++++++|+|+++|+..++.++.+ ||+ .|++..++|+++...+...|. ++
T Consensus 78 ~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~--------------~gd-~Vl~~~p~y~~~~~~~~~~g~---~~ 139 (397)
T 2zyj_A 78 PLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLD--------------EGS-PVLLEAPSYMGAIQAFRLQGP---RF 139 (397)
T ss_dssp HHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEEESCCHHHHHHHHTTCC---EE
T ss_pred HHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCC--------------CCC-EEEEeCCCcHHHHHHHHHcCC---EE
Confidence 344556666788777899999999999999887743 445 788888899999999998887 78
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEE-EeccCCCccccccCh---HHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFV-NCTSGTTVLGAFDPI---EEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~~l---~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+.+|.++++ +|+++|++++++. ++++| ++++++|++|.+.|. ++|.++|++||+++|+|++|+.+.....
T Consensus 140 ~~~~~~~~~-~d~~~l~~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 213 (397)
T 2zyj_A 140 LTVPAGEEG-PDLDALEEVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA 213 (397)
T ss_dssp EEEEEETTE-ECHHHHHHHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC
T ss_pred EecCcCCCC-CCHHHHHHHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC
Confidence 888887665 9999999999761 26676 578999999999775 5899999999999999999998764221
Q ss_pred cccCcccCCC--C---CCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 272 KYRHPRLTGI--E---RADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 272 ~~~~~~~~~~--~---~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
.. . .+..+ + +..+++.++||+++.+.++|+++++ ++...........+.. +
T Consensus 214 ~~-~-~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~------------------~--- 269 (397)
T 2zyj_A 214 RL-P-SLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAH-PEALQKLVQAKQGADL------------------H--- 269 (397)
T ss_dssp CC-C-CHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHHS------------------S---
T ss_pred CC-C-chhhhCcccCCCeEEEEecccccccccceeEEEecC-HHHHHHHHHHHHhhcC------------------C---
Confidence 10 0 11111 1 1236788999999943678998875 4444332211111100 0
Q ss_pred CCchHHHHHHHHh--cH-HHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEecCCceeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 347 NDIFKLWLQWRAK--GD-EGFEKQIDRLMELAEYMVKKIKSMPD-KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 347 ~~~l~~~~~l~~~--g~-~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
...+...++...+ +. +.+++..++..++++++.+.|+++.| ++++.. |..+.+++...+....
T Consensus 270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~-~~~g~~~~~~~~~~~~------------ 336 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTR-PKGGMFVWMELPKGLS------------ 336 (397)
T ss_dssp CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECC-CSBSSEEEEECSTTCC------------
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEcc-CCccEEEEEEcCCCCC------------
Confidence 1122233333333 22 45777788888899999999986236 688753 4444444322222111
Q ss_pred hhhHHHHHHHHhcccEEEeeeeeC---CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 423 EITPILKGRMMQAGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.++|.++|+.+.....+. ...+++|+++. .. ++++|++++++|++++++
T Consensus 337 --~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~-~~-~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 337 --AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYA-TL-DREGIAEGVRRLGRALKG 392 (397)
T ss_dssp --HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECS-SS-CHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcC-CC-CHHHHHHHHHHHHHHHHH
Confidence 2457788888885544322221 11579999944 33 899999999999987653
No 98
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=3.6e-25 Score=218.48 Aligned_cols=306 Identities=14% Similarity=0.122 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|.+ .+++++|||+|+..++.++.-. ||+ .|+++..+|+++..++...|.
T Consensus 58 ~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~-------------~gd-~vl~~~~~~~~~~~~~~~~g~--- 118 (391)
T 3dr4_A 58 IVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIG-------------PGD-EVIVPSLTYIASANSVTYCGA--- 118 (391)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCC-------------TTC-EEEEESSSCTHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC-------------CcC-EEEECCCchHHHHHHHHHCCC---
Confidence 345566688888887 5899999999999999887211 445 788999999999999999988
Q ss_pred CeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccc
Q psy12303 194 NCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 194 ~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~ 272 (480)
+++.++++ +++.+|+++|+++++++ +++|++ +|++|.+.|+++|.++|+++|+++|+|++|+.+....+.
T Consensus 119 ~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~---~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 189 (391)
T 3dr4_A 119 TPVLVDNDPRTFNLDAAKLEALITPR------TKAIMP---VHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGK 189 (391)
T ss_dssp EEEEECBCTTTCSBCGGGSGGGCCTT------EEEECC---BCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE
T ss_pred EEEEEecCccccCcCHHHHHHhcCCC------ceEEEE---ECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCe
Confidence 88999998 56899999999988754 777774 568999999999999999999999999999976654432
Q ss_pred ccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 273 YRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 273 ~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
. ...+.++++++++.||++++ ...|+++.+++................ .. .+ +....+..+....+
T Consensus 190 ~----~~~~~di~~~S~s~~K~l~~-g~gg~~~~~~~~~~~~~~~~~~~g~~~-~~----~~----~~~~~g~~~~~~~l 255 (391)
T 3dr4_A 190 K----SGSLGDCATFSFFGNAIITT-GEGGMITTNDDDLAAKMRLLRGQGMDP-NR----RY----WFPIVGFNYRMTNI 255 (391)
T ss_dssp E----TTSSSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHHBTTCCT-TS----TT----CCSSCCCBCBCCHH
T ss_pred e----ecccCCEEEEECCCCCcCCc-CCeEEEEECCHHHHHHHHHHHhcCCCC-CC----cc----cccccccccCCCHH
Confidence 1 11111355566668899986 446677766654443322111000000 00 00 00011222333344
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC--Cc---ee--EEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 353 WLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE--PE---MV--NVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 353 ~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~--~~---~~--~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
.+++.....+++++..++..++++++.+.|.+ . ++++... +. .. .+.+... .. .+.+ .
T Consensus 256 ~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~i~~~-~~-~~~~-----------~ 320 (391)
T 3dr4_A 256 QAAIGLAQLERVDEHLAARERVVGWYEQKLAR-L-GNRVTKPHVALTGRHVFWMYTVRLG-EG-LSTT-----------R 320 (391)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGG-G-TTSEECCCCCTTSCCCCSSEEEEEC-SS-CSSC-----------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CccccCcCCCCCCcceeEEEEEEEC-Cc-cchh-----------H
Confidence 44444444567788899999999999999999 6 8877654 21 11 2333322 10 0110 2
Q ss_pred HHHHHHHHhcccEEEeee-e------e-----CC-------cccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 426 PILKGRMMQAGTMMVGYQ-P------L-----ND-------LPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~-~------~-----~~-------~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.++.+.|.++|+.+.... + + .. ....+|++ +++.+|++||++++++|++++
T Consensus 321 ~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~-~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 321 DQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLP-THAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHHHHHHh
Confidence 467788888885543221 0 0 00 13689999 899999999999999999875
No 99
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.93 E-value=5.2e-24 Score=207.75 Aligned_cols=291 Identities=8% Similarity=-0.013 Sum_probs=208.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.+++++++|+|||+|+..++.++ + .|+++..+|.++...+...|. +
T Consensus 64 ~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~------------------d-~vi~~~~~~~~~~~~~~~~g~---~ 121 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF------------------E-KILIIVPSYAEYEINAKKHGV---S 121 (361)
T ss_dssp HHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC------------------S-EEEEEESCCTHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc------------------C-cEEEecCChHHHHHHHHHcCC---e
Confidence 45677788888998889999999999999888655 1 678888899999999999988 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
++.+|.++++.+++++|++++++ +++|++++++|++|.+.| +++|.++|++||+++|+|++|+.+... .
T Consensus 122 ~~~~~~~~~~~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~ 193 (361)
T 3ftb_A 122 VVFSYLDENMCIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-P 193 (361)
T ss_dssp EEEEECCTTSCCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-T
T ss_pred EEEeecCcccCCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-c
Confidence 89999998888999999888864 668899999999999976 667788888999999999999877653 1
Q ss_pred cccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
....-...+.....+++.|++|.++ .+.++|++++.+++...........+ ..+.+
T Consensus 194 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~ 250 (361)
T 3ftb_A 194 SSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW-----------------------NINCF 250 (361)
T ss_dssp TSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----------------------CSCHH
T ss_pred ccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----------------------CCCHH
Confidence 1110011112234466779999998 44677888767776665543222111 02233
Q ss_pred HHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE-EecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 351 KLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFY-LILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 351 ~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
..++....+ ..+.+++..++..++++++.+.|++ +++++ +. ++..+.+.+.+. . .. ..++
T Consensus 251 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~-~~~~~~~~~~~~-~-~~--------------~~~l 312 (361)
T 3ftb_A 251 AEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK-IGFIKRVF-SPHANFVLCRLE-N-IS--------------GEKL 312 (361)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH-SSSEEEEE-CCSSSEEEEEES-S-SC--------------HHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceec-CCCCeEEEEEcC-C-CC--------------HHHH
Confidence 444444433 2466788889999999999999999 88998 64 555555555432 1 11 2467
Q ss_pred HHHHHhcccEEEeeeeeCCc-ccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 429 KGRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
.+.|.++|+.+.....+.+. .+++|+++ + ++++++++++.|+++.+.+
T Consensus 313 ~~~l~~~gi~v~~g~~~~~~~~~~iRis~-~---~~~~~~~l~~~l~~~~~~l 361 (361)
T 3ftb_A 313 YDSLLKEDIVIRRCCNFIGLDDSFVRFAI-K---DEKKNTKFLRALKGVENNL 361 (361)
T ss_dssp HHHHHTTTEECEECTTSTTCCTTEEEEEC-C---CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCeEEeeCccCCCCCCCEEEEEc-C---CHHHHHHHHHHHHHHHhcC
Confidence 78888887544332222111 57999994 3 8899999999999887654
No 100
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=7.4e-25 Score=216.83 Aligned_cols=303 Identities=10% Similarity=0.045 Sum_probs=205.3
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .+++++|||+|+..++.+++-. ||+ .|+++..+|+++..++...|. +
T Consensus 66 ~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~-------------~gd-~vl~~~~~~~~~~~~~~~~g~---~ 126 (399)
T 2oga_A 66 EGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIG-------------PGD-EVIVPSHTYIASWLAVSATGA---T 126 (399)
T ss_dssp HHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCTHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCC-------------CcC-EEEECCCccHHHHHHHHHCCC---E
Confidence 45566788889886 4889999999999998776211 445 788888999999999999888 7
Q ss_pred eEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+|.++ ++.+|+++|+++++++ +++|++ +|++|.+.|+++|.++|+++|+++|+|++|+.+... +..
T Consensus 127 ~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~ 196 (399)
T 2oga_A 127 PVPVEPHEDHPTLDPLLVEKAITPR------TRALLP---VHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGR 196 (399)
T ss_dssp EEEECBCSSSSSBCHHHHHHHCCTT------EEEECC---BCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTE
T ss_pred EEEEecCCCCCCcCHHHHHHhcCCC------CeEEEE---eCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCe
Confidence 88999876 5789999999998754 777774 578999999999999999999999999999876442 111
Q ss_pred cCcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 274 RHPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
.. .. ..|++++|+| |+++.|..+|++++++++........... +... .+.. .....+.+...+.
T Consensus 197 ~~---~~--~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~---g~~~----~~~~--~~~g~~~~~~~~~ 262 (399)
T 2oga_A 197 RI---GA--GSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNY---GSRQ----KYSH--ETKGTNSRLDEMQ 262 (399)
T ss_dssp ET---TC--TTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBT---TCSS----TTCC--CSCCCBCCCCHHH
T ss_pred ec---cc--ccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhc---Cccc----cccc--cccccCCCcCHHH
Confidence 11 11 3589999985 99986445677776656554433211000 0000 0000 0011112345555
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE---EEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS---FWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~---f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+++.+.. .+.+++..++..++++++.+.|.+ ++++++...|.....+ |...... ..++
T Consensus 263 ~a~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~----------------~~~l 323 (399)
T 2oga_A 263 AAVLRIR--LAHLDSWNGRRSALAAEYLSGLAG-LPGIGLPVTAPDTDPVWHLFTVRTER----------------RDEL 323 (399)
T ss_dssp HHHHHHH--HHTHHHHHHHHHHHHHHHHHHTTT-CTTCBCCCCCTTEECCCSSEEEECSS----------------HHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCcceeEEEEEECCC----------------HHHH
Confidence 5555544 344566778888899999999999 8898875444333322 2211100 2356
Q ss_pred HHHHHhcccEEEeeeeeC----------C------------cccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 429 KGRMMQAGTMMVGYQPLN----------D------------LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~----------~------------~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
.+.|.+.|+.+....... + ..+++|++ ++..+|++||++++++|+++++++
T Consensus 324 ~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~-~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 324 RSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLP-IGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEEC-CSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEcc-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 777878885443211000 0 02689999 888999999999999999987653
No 101
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.93 E-value=4.4e-24 Score=207.88 Aligned_cols=287 Identities=11% Similarity=0.087 Sum_probs=201.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
.++++.+++++|.+++++++|+|+|+++..++.++.+ || + .|+++.++|.++..+++..|.
T Consensus 61 ~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~--------------~g~d-~Vl~~~p~~~~~~~~~~~~g~--- 122 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCE--------------PGKD-AILYCPPTYGMYSVSAETIGV--- 122 (356)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCC--------------TTTC-EEEECSSSCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhC--------------CCCC-EEEEeCCChHHHHHHHHHcCC---
Confidence 3566778888899878899999999999999987743 45 4 788999999999999999888
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeeccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|.++++.+|+++|+++++ + +++|++++++||||.+.|.+++.++++. +|+++++|++|+.+....+
T Consensus 123 ~~~~v~~~~~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~ 195 (356)
T 1fg7_A 123 ECRTVPTLDNWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQAS 195 (356)
T ss_dssp EEEECCCCTTSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGC
T ss_pred EEEEeeCCCCCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCc
Confidence 78889988778899999998886 3 8999999999999999886555554443 8999999999997652111
Q ss_pred cccCcccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
.. .+....+.++++.+++|+++. +.++|++++ +++...........| ....+
T Consensus 196 ~~---~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~-----------------------~~~~~ 248 (356)
T 1fg7_A 196 LA---GWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPY-----------------------PLSTP 248 (356)
T ss_dssp SG---GGTTTCTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSS-----------------------CSCHH
T ss_pred HH---HHHhhCCCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcCCC-----------------------CCCHH
Confidence 00 111111456788899999974 356899887 445544332211111 02344
Q ss_pred HHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH
Q psy12303 351 KLWLQWRAKGDEG---FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI 427 (480)
Q Consensus 351 ~~~~~l~~~g~~~---~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (480)
...++...+...+ +++..++..++++++.+.|++ ++++..+.++....+.+.+ + . ..+
T Consensus 249 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~-~-~----------------~~~ 309 (356)
T 1fg7_A 249 VADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE-IPCVEQVFDSETNYILARF-K-A----------------SSA 309 (356)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTEEEECCCSSSEEEEEE-T-T----------------HHH
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHh-CCCceEECCCCCeEEEEEC-C-C----------------HHH
Confidence 5555555554433 678888889999999999999 7765333444444443332 2 1 235
Q ss_pred HHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 428 LKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 428 i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.+.|.+.|+.+...+...+..+++|+++ . +++|+++++++|+++
T Consensus 310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~-~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 310 VFKSLWDQGIILRDQNKQPSLSGCLRITV-G---TREESQRVIDALRAE 354 (356)
T ss_dssp HHHHHHHTTEECEECTTSTTCTTEEEEEC-C---CHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCEEEEECCCCCCCCCeEEEEe-C---CHHHHHHHHHHHHhh
Confidence 67778788855433133233246999994 3 689999999999875
No 102
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.93 E-value=1.5e-24 Score=213.59 Aligned_cols=294 Identities=16% Similarity=0.129 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++.+++++|.+ +.+++++||+|+..++.++.+ ||+ .|+++...|.++..++...|.
T Consensus 84 ~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~~~~~~~--------------~gd-~v~~~~~~~~~~~~~~~~~g~- 145 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS--RALLFISGFAANQAVIAAMMA--------------KED-RIAADRLSHASLLEAASLSPS- 145 (384)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHHTSSS-
T ss_pred HHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhCC--------------CCc-EEEEcccccHHHHHHHHHcCC-
Confidence 45567788899999986 367777779999998877643 445 788999999999999998887
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|. +|+++|++++++. ...+++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.+.-.
T Consensus 146 --~~~~~~~-----~d~~~l~~~l~~~---~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~ 215 (384)
T 1bs0_A 146 --QLRRFAH-----NDVTHLARLLASP---CPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQ 215 (384)
T ss_dssp --EEEEECT-----TCHHHHHHHHHSC---CSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGG
T ss_pred --CEEEeCC-----CCHHHHHHHHHhc---CCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCC
Confidence 7778874 4899999988753 11378999999999999999999999999999999999999986643200
Q ss_pred cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
....+...+. .+|+++.|+||+++ |.| |+++++ ++...........|... .....+.
T Consensus 216 ~~~~~~~~~~-~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~-------------------~~~~~~~ 272 (384)
T 1bs0_A 216 GRGSCWLQKV-KPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYS-------------------TSMPPAQ 272 (384)
T ss_dssp GCCHHHHTTC-CCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSS-------------------BCCCHHH
T ss_pred CCchHHhcCC-CCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcC-------------------CCCCHHH
Confidence 0000011122 57899999999998 555 877764 55544332211112110 0112222
Q ss_pred ---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 352 ---LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 352 ---~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+..+++.+.....++..++..++++++.+.|++ . ++++. ++....+.+.+ +.. .. ..++
T Consensus 273 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~-~~~------------~~--~~~l 334 (384)
T 1bs0_A 273 AQALRASLAVIRSDEGDARREKLAALITRFRAGVQD-L-PFTLA-DSCSAIQPLIV-GDN------------SR--ALQL 334 (384)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-S-SCEEC-SCCSSBCCEEE-ESH------------HH--HHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh-c-CCccc-CCCCCEEEEEe-CCH------------HH--HHHH
Confidence 233444332114567888999999999999999 5 78875 34444444433 211 00 2457
Q ss_pred HHHHHhcccEEEeeeeeCC---cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 429 KGRMMQAGTMMVGYQPLND---LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~---~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+.|.++|+. +.+....+ ..+++|++ ++..++++++++++++|+++
T Consensus 335 ~~~l~~~gi~-v~~~~~~~~~~~~~~~Ri~-~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 335 AEKLRQQGCW-VTAIRPPTVPAGTARLRLT-LTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHTTEE-CCEECTTSSCTTCEEECCB-CCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcE-EEeecCCCCCCCCceEEEE-EcCCCCHHHHHHHHHHHHhh
Confidence 7788888744 44332221 14799999 77788999999999999875
No 103
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=9.8e-25 Score=216.94 Aligned_cols=328 Identities=11% Similarity=0.058 Sum_probs=214.8
Q ss_pred HHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 89 AGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 89 ~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
+.+.+...+... ...|...++..++++.+.+++.+.+|. ++ .++++|+|||+|+..++.++..
T Consensus 55 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~------------- 121 (412)
T 2x5d_A 55 IVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLD------------- 121 (412)
T ss_dssp HHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCC-------------
Confidence 335555544332 234544555678888888888888886 44 5899999999999999988743
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
||+ .|+++.++|+++...+...|. +++.+|.+++ +.+|+++|+++++++ +++|++++++|++|.+.|
T Consensus 122 -~gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~~~ 190 (412)
T 2x5d_A 122 -HGD-TILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQCVE 190 (412)
T ss_dssp -TTC-EEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCCCC
T ss_pred -CCC-EEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCcCC
Confidence 445 788888999999999999888 7888998764 347888898887633 788889999999999976
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhc
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~ 317 (480)
+++|.++|++||+++|+|++|+.+.+....... ..+.+..+.|+++.++||+++ .+.++|++++ ++........
T Consensus 191 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~ 269 (412)
T 2x5d_A 191 LDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALAR 269 (412)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEc-CHHHHHHHHH
Confidence 688999999999999999999987642211100 011111256888999999997 4456899887 4444443321
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
... +.. .....+..+++...+ +.+.++++.++..++++++.+.|++ . +++++ ++
T Consensus 270 ~~~-~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~ 325 (412)
T 2x5d_A 270 IKS-YHD--------------------YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE-A-GWMVE-NP 325 (412)
T ss_dssp HHH-HHC--------------------CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCC-CC
T ss_pred HHh-hhc--------------------cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEec-CC
Confidence 100 000 001222333333322 3466788889999999999999998 5 77764 45
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
..+.+++...+..... .+ ..++.+.|.+ .|+.+.....+.. ..+++|+++ +. ++++|+++++.|
T Consensus 326 ~~g~~~~~~~~~~~~~---------~~--~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~-~~--~~~~l~~~l~~l 391 (412)
T 2x5d_A 326 KASMYVWAKIPEPYAH---------LG--SLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFAL-IE--NRDRLRQAVRGI 391 (412)
T ss_dssp SBSSEEEEECCTTTGG---------GC--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC-CS--CHHHHHHHHHHH
T ss_pred CeeeEEEEEcCCccCC---------CC--HHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEe-cC--CHHHHHHHHHHH
Confidence 5554444323322100 00 2356677765 5754433222211 147999994 33 899999999999
Q ss_pred HHhhcc
Q psy12303 474 DRLGHD 479 (480)
Q Consensus 474 ~~~~~~ 479 (480)
++++++
T Consensus 392 ~~~l~~ 397 (412)
T 2x5d_A 392 KAMFRA 397 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987653
No 104
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=2.1e-24 Score=214.34 Aligned_cols=296 Identities=13% Similarity=0.091 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++++++++|.+. .+++++||+||..++.++.+ ||+ .|+++..+|+++..++...|.
T Consensus 104 ~~~~~l~~~la~~~g~~~--~i~~~sGt~a~~~~l~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~g~- 165 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDE--CLLSQSGWNANVGLLQTICQ--------------PNT-NVYIDFFAHMSLWEGARYANA- 165 (409)
T ss_dssp TTSCHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCC--------------TTC-EEEEETTSCHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHhCCCe--EEEecchHHHHHHHHHHhcC--------------CCC-EEEECCCcCHHHHHHHHHcCC-
Confidence 444567788999999875 57778889999999887754 445 888999999999999999887
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.++. +|+++|++++++.. +++|++++++|++|.+.|+++|.++|++||+++|+|++|+++.+...
T Consensus 166 --~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~ 233 (409)
T 3kki_A 166 --QAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPN 233 (409)
T ss_dssp --EEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGG
T ss_pred --eEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCC
Confidence 6666664 58999999998741 68999999999999999999999999999999999999987654211
Q ss_pred cccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
........++ .++|+++.+++|+++.+ .|+++. ++............+..... .......
T Consensus 234 g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~-~~~~~~~~~~~~~~~~~~~~----------------~~~~~~a 294 (409)
T 3kki_A 234 GAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWC-NNEVNRCVPFISYPAIFSST----------------LLPYEAA 294 (409)
T ss_dssp GCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEE-SSSGGGTHHHHCHHHHHSBC----------------CCHHHHH
T ss_pred CCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEE-CHHHHHHHHHhCcCccccCC----------------CcHHHHH
Confidence 1000001111 36789999999999865 366654 44444332221122211100 0001122
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
++..+++.+ +..+++.++..++++++.+.|++ . ++++. +....+.+.+.... ...++.+
T Consensus 295 a~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~--~~~~~~~~~~~~~~---------------~~~~~~~ 353 (409)
T 3kki_A 295 GLETTLEII--ESADNRRQHLDRMARKLRIGLSQ-L-GLTIR--SESQIIGLETGDER---------------NTEKVRD 353 (409)
T ss_dssp HHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHT-T-TCCCC--CSSSEEEEEEESHH---------------HHHHHHH
T ss_pred HHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH-c-CCccC--CCCCEEEEEeCCHH---------------HHHHHHH
Confidence 233333332 22256778888999999999999 4 77764 34444544432110 0235678
Q ss_pred HHHhcccEEEeeee---eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 431 RMMQAGTMMVGYQP---LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 431 ~l~~~g~~~~~~~~---~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.|.++|+++..... ..+ .+++|++ ++..+|++||++++++|+++++.
T Consensus 354 ~L~~~Gv~v~~~~~~~~~~~-~~~iRi~-~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 354 YLESNGVFGSVFCRPATSKN-KNIIRLS-LNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHTTEECEEECTTSSCTT-CEEEEEE-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCceEeeeCCCCcCCC-CcEEEEE-ccCCCCHHHHHHHHHHHHHHHhc
Confidence 88888855332211 112 5799999 77889999999999999988753
No 105
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.93 E-value=4.3e-24 Score=212.06 Aligned_cols=304 Identities=13% Similarity=0.090 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH-cCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-CGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-~g~ 190 (480)
....++++++++++|.+ ++++|+|||+|+..++.++.. +|+ .|+++..+|.++...+.. +..
T Consensus 56 ~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~--------------~gd-~vi~~~~~~~~~~~~~~~~~~~ 118 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLR--------------PGD-EVVAAKGLFGQTIGLFGQVLSL 118 (412)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCC--------------TTC-EEEEETTCCHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCchhHHHHHHHHHHH
Confidence 44556778899999986 599999999999999987632 445 788888999987776543 221
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
...+++.++. |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....
T Consensus 119 ~g~~~~~~~~------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~ 186 (412)
T 2cb1_A 119 MGVTVRYVDP------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALC 186 (412)
T ss_dssp TTCEEEEECS------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSC
T ss_pred cCCEEEEECC------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccC
Confidence 1227777775 388899888764 8999999999999999999999999999999999999999873222
Q ss_pred ccccCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhh-HhhhcCCcccccccc-------cccCcccCCCCccc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLL-ISCNQMSAEYLFMQD-------KLYDVRYDTGDKVI 341 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~-~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~ 341 (480)
..... ++|+++.|+||++++|.+ .|++++.+.... .......++...... .........+.. .
T Consensus 187 ~~~~~-------~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~ 258 (412)
T 2cb1_A 187 RPLAW-------GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-S 258 (412)
T ss_dssp CGGGG-------TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-T
T ss_pred Ccccc-------CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-H
Confidence 22223 789999999999988765 788877664321 000000000000000 000000000000 0
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----------------ceeEEEEEe
Q psy12303 342 QCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-----------------EMVNVSFWY 404 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-----------------~~~~v~f~~ 404 (480)
..+........|+.+.. .+.+.+++++..++++++.+.|.+ .+++.++..| ..++++|.+
T Consensus 259 ~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~ 335 (412)
T 2cb1_A 259 LCGMALSPFNAYLLFQG--LETVALRVARMSETARFLAERLQG-HPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL 335 (412)
T ss_dssp TTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHT-CTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC
T ss_pred hcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 01222345566666544 344567777888999999999999 8898855222 345677765
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeee--------eeC----------------Cc-ccEEEEecccC
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQ--------PLN----------------DL-PNFFRNIISSA 459 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~--------~~~----------------~~-~~~~R~~~~~~ 459 (480)
. . ...+.+.+.+.|.+. ... ... +. .+.+|+| .+.
T Consensus 336 -~-~----------------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s-~g~ 395 (412)
T 2cb1_A 336 -G-D----------------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVS-VGL 395 (412)
T ss_dssp -S-S----------------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEE-CCS
T ss_pred -C-C----------------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEE-ecc
Confidence 2 1 123344444555443 221 000 10 4799999 889
Q ss_pred CCCHHHHHHHHHHHHH
Q psy12303 460 AVTEGDIDFLLTEMDR 475 (480)
Q Consensus 460 ~~t~~di~~~~~~l~~ 475 (480)
.+++++|+.++++|++
T Consensus 396 ~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 396 EDPLDLLALFEEALEA 411 (412)
T ss_dssp SCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999875
No 106
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=5.6e-24 Score=210.67 Aligned_cols=305 Identities=14% Similarity=0.092 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++.+++++|.+ ..+++++ |++++..++.++... .||+ .|+++..+|+++..+++..|.
T Consensus 91 ~~~~~l~~~la~~~~~~-~~i~~~s-G~~a~~~~~~~l~~~------------~~gd-~Vl~~~~~~~~~~~~~~~~g~- 154 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKE-AALVFSS-AYNANDATLSTLRVL------------FPGL-IIYSDSLNHASMIEGIKRNAG- 154 (401)
T ss_dssp HHHHHHHHHHHHHTTCS-EEEEESC-HHHHHHHHHHHHHHH------------STTC-EEEEETTCCHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHhCCC-cEEEECC-cHHHHHHHHHHHhcC------------CCCC-EEEECchhhHHHHHHHHHcCC-
Confidence 44456778899999975 4566655 555888887765321 0445 888899999999999998887
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|.+ |+++|+++++... ..++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.+.-.
T Consensus 155 --~~~~v~~~-----d~~~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~ 225 (401)
T 2bwn_A 155 --PKRIFRHN-----DVAHLRELIAADD--PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPR 225 (401)
T ss_dssp --CEEEECTT-----CHHHHHHHHHHSC--TTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTT
T ss_pred --eEEEEcCC-----CHHHHHHHHHhhc--cCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 88889875 8999999987421 02389999999999999999999999999999999999999996543100
Q ss_pred cccCcccCCC-CCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGI-ERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~-~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
........++ +..|.++.+++|+++.|. |+++. ++............+.... .+......
T Consensus 226 g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~-~~~~~~~l~~~~~~~~~~~----------------~~~~~~~~ 286 (401)
T 2bwn_A 226 GAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA-SARMVDAVRSYAPGFIFST----------------SLPPAIAA 286 (401)
T ss_dssp SCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE-CHHHHHHHHHHCHHHHTSB----------------CCCHHHHH
T ss_pred CceeeeccCccccCcEEEeechhhccCCC--CEEec-CHHHHHHHHHhCcCceecC----------------CCCHHHHH
Confidence 0000001111 245788889999999643 66665 4444433221111111100 00001233
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHH
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKG 430 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 430 (480)
++..+++.+...+++++.++..++++++.+.|++ . |++++ ++..+++++.+. .. .. ..++.+
T Consensus 287 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~-~~------------~~--~~~~~~ 348 (401)
T 2bwn_A 287 GAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA-L-GMPII-DHGSHIVPVVIG-DP------------VH--TKAVSD 348 (401)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCSSSCEEEECC-CH------------HH--HHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-C-CCccc-CCCCCeEEEEeC-Ch------------HH--HHHHHH
Confidence 4455566555556788889999999999999999 5 88775 455555555431 11 00 235667
Q ss_pred HHH-hcccEEEeeeeeCCc---ccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 431 RMM-QAGTMMVGYQPLNDL---PNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 431 ~l~-~~g~~~~~~~~~~~~---~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
.|. +.|+. +.+....+. .+++|++ ++..+|++||++++++|+++++++
T Consensus 349 ~L~~~~gi~-v~~~~~~~~~~~~~~iRis-~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 349 MLLSDYGVY-VQPINFPTVPRGTERLRFT-PSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHCEE-CCEECTTTSCTTCCEEEEC-CCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHhcCCEE-EeecCCCCCCCCCceEEEE-eeCCCCHHHHHHHHHHHHHHHHhc
Confidence 775 56744 433322221 2589999 778889999999999999987653
No 107
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=4.3e-25 Score=213.23 Aligned_cols=301 Identities=16% Similarity=0.062 Sum_probs=203.6
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEE-CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc-eEEEecCCCchhHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSIL-APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ-LVMFTSDQCHYSVRS 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~-t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~-~~vl~~~~~h~s~~~ 183 (480)
++.+.++.+++++.+++++|+++ .+++| |+|||+|+..++.... . |. + .+|+.+..+|... .
T Consensus 45 ~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~--------~~-----~~~~i~~~~~~~~~~-~ 109 (361)
T 3m5u_A 45 TKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-L--------NG-----VCEYANTGVWTKKAI-K 109 (361)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-C--------SS-----CEEEEECSHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-C--------CC-----eEEEEeCCHHHHHHH-H
Confidence 44566777889999999999964 57888 9999999999887653 1 11 2 1455555555433 3
Q ss_pred HHHHcCCCCCCeEEeeCCCCCC--CCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGR--LIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~--~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
.++..|. ++..+++++++. ++++. + |+++ +++|.+++.+|.+|.+.|. +++ +|+++|||+
T Consensus 110 ~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~------t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~ 171 (361)
T 3m5u_A 110 EAQILGV---NVKTVASSEESNFDHIPRV-E--FSDN------ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDA 171 (361)
T ss_dssp HHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTT------SSEEEEESEETTTTEECSS-----CCC-CSSCEEEEC
T ss_pred HHHHcCC---ceEEEecccCcCCCcCChh-h--cCCC------CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEc
Confidence 4455676 889999988774 56665 3 6554 8899999999999998552 344 499999999
Q ss_pred cccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc-CCccccccccc-ccCcccCCCCc
Q psy12303 262 AWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ-MSAEYLFMQDK-LYDVRYDTGDK 339 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~~~~~ 339 (480)
+++.+..+.+.. .+|++++++|||++ |.|+|+++++++. +..... ..+.++..... ..... ++
T Consensus 172 ~q~~g~~~id~~---------~~d~~~~s~~K~~g-p~G~g~l~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~--~~-- 236 (361)
T 3m5u_A 172 SSDFFSRKVDFS---------NIALFYGGVQKNAG-ISGLSCIFIRKDM-LERSKNKQIPSMLNYLTHAENQSL--FN-- 236 (361)
T ss_dssp GGGTTSSCCCCT---------TEEEEEEETTTTSS-CTTCEEEEEEHHH-HHHHHTCCCCGGGCHHHHHHTTTC--SS--
T ss_pred ccccCCCCCCcc---------cCCEEEEechhccC-CCccEEEEEcHHH-HhhhcCCCCCceeehHHHhhcCCC--CC--
Confidence 999998877653 45899999999996 9999999998653 333322 22333211100 00000 11
Q ss_pred cccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCe-EEecCCc---eeEEEEEeec-CccCCC
Q psy12303 340 VIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKF-YLILEPE---MVNVSFWYLP-TRVRNM 412 (480)
Q Consensus 340 ~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~-~~~~~~~---~~~v~f~~~~-~~~~~~ 412 (480)
+-+ ....++..+++.+-.. |++++.++..++++++.+.|++ ++++ +++.++. ..+++|.+.. ..
T Consensus 237 ----Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~-~~g~~~~~~~~~~rs~~ivsf~~~~~~~---- 307 (361)
T 3m5u_A 237 ----TPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL-SNGFYKGHADKKDRSLMNVSFNIAKNKD---- 307 (361)
T ss_dssp ----CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT-STTSEEESSCGGGBCSSEEEEEESSCTT----
T ss_pred ----CccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCeeeccCCHHHcCCeEEEEECCCchh----
Confidence 111 1344555666665556 7899999999999999999999 7766 6643332 2466775432 11
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+ ..++...|.+.|+. +.. .... .+.+|+| .+.++|++||+++++.|+++.++
T Consensus 308 --------~---~~~~~~~L~~~gI~-~~~-g~~~-~g~iRiS-~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 308 --------L---EPLFVKEAEEAGMI-GLK-GHRI-LGGIRAS-IYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp --------H---HHHHHHHHHHTTEE-CCB-CCTT-TCSEEEE-CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred --------h---hHHHHHHHHHCCCE-Eec-CCCc-cCeEEEE-ccCCCCHHHHHHHHHHHHHHHHh
Confidence 1 12455667777743 332 2222 2569999 77889999999999999998753
No 108
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.93 E-value=3.3e-24 Score=213.36 Aligned_cols=319 Identities=12% Similarity=0.044 Sum_probs=211.2
Q ss_pred chhcChhhHHHHHHHHHHHHHHh------C--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec
Q psy12303 103 TYEIAPVFILMETVVLEKMRQII------G--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS 174 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~------g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~ 174 (480)
.|.......++++.+.+++.+.+ | .++.++++|+|+|+|+..++.++.. ||+ .|+++
T Consensus 70 ~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~--------------~gd-~vl~~ 134 (416)
T 1bw0_A 70 GYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD--------------AGD-YALVP 134 (416)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEE
T ss_pred CcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCC--------------CCC-EEEEc
Confidence 34434456677777777776322 2 4567899999999999999988743 445 78888
Q ss_pred CCCchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHH
Q psy12303 175 DQCHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADI 249 (480)
Q Consensus 175 ~~~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i 249 (480)
.++|+++..++...|. +++.+|.++ ++.+|+++|++++++. +++|++++++|++|.+.| +++|.++
T Consensus 135 ~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~ 205 (416)
T 1bw0_A 135 QPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKHVEDIVRL 205 (416)
T ss_dssp ESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHHHHHHHHH
Confidence 8899999999999888 788888764 3678999999988754 889999999999999998 9999999
Q ss_pred HHHcCcEEEeeccccccccccc----cccCcccCCCC--CCccceeCccccCCCc-ccceEEEEeCc-hhhHhhhcCCcc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSK----KYRHPRLTGIE--RADSVTWNPHKLMGTL-LQCSTIHFKQD-GLLISCNQMSAE 321 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~----~~~~~~~~~~~--~~D~~~~s~hK~~~~p-~~~g~~~~~~~-~~~~~~~~~~~~ 321 (480)
|++||+++|+|++|+.+.+... ... .+..+. ..++++.+++|+++.| ..+|+++++++ ............
T Consensus 206 ~~~~~~~li~De~~~~~~~~g~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~ 283 (416)
T 1bw0_A 206 AEELRLPLFSDEIYAGMVFKGKDPNATFT--SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKR 283 (416)
T ss_dssp HHHHTCCEEEECTTTTCBCCSSCTTCCCC--CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHH
T ss_pred HHHcCCEEEEEccccccccCCCCCCCCcc--CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHH
Confidence 9999999999999998543221 111 122221 2246677999998655 56899998775 222211100000
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEE
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVS 401 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~ 401 (480)
+. ... + ........++..+++....+++++..++..++++++.+.|++ +|+++++ .|..+.++
T Consensus 284 ~~-~~~-----------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~~~~~~~~ 346 (416)
T 1bw0_A 284 VG-MLV-----------C---GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE-CIGLAPT-MPRGAMYL 346 (416)
T ss_dssp HH-HHH-----------T---CSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT-STTEEEC-CCCBTTEE
T ss_pred Hh-ccc-----------c---CCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh-CCCCccc-CCCeeEEE
Confidence 00 000 0 000011223333344334677888999999999999999999 8899875 34444443
Q ss_pred E-EeecCccCC-CchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 402 F-WYLPTRVRN-MPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 402 f-~~~~~~~~~-~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+ .+......+ .+ ..++.+.|. +.|+.+.....+.. .+++|+++ .+++++|+++++.|.++++
T Consensus 347 ~~~~~~~~~~~~~~-----------~~~~~~~l~~~~gi~v~~g~~f~~-~~~iRis~---~~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 347 MSRIDLEKYRDIKT-----------DVEFFEKLLEEENVQVLPGTIFHA-PGFTRLTT---TRPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp EEEECGGGBSSCCS-----------HHHHHHHHHHHHCEECEEGGGGTC-TTEEEEEC---CSCHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHcCCCCC-----------HHHHHHHHHHHCCEEEecccccCC-CCeEEEEe---cCCHHHHHHHHHHHHHHHH
Confidence 3 332111100 00 234566664 67754433222222 57999994 3689999999999988765
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 412 ~ 412 (416)
T 1bw0_A 412 R 412 (416)
T ss_dssp H
T ss_pred H
Confidence 3
No 109
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.93 E-value=7.9e-25 Score=217.04 Aligned_cols=309 Identities=12% Similarity=0.107 Sum_probs=201.6
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH-H-
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS-C- 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~-~- 184 (480)
.+...++++++++++++++|.++. .+++++||+|+..++.++.. ||+ .|+++..+|+++.. .
T Consensus 64 ~~~~~~l~~~~r~~la~~~g~~~~-~i~~~sGt~a~~~a~~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~ 127 (405)
T 2vi8_A 64 CEYVDIVEELARERAKQLFGAEHA-NVQPHSGAQANMAVYFTVLE--------------HGD-TVLGMNLSHGGHLTHGS 127 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHHHHHHHCC--------------TTC-EEEEECGGGTCCTTTTC
T ss_pred chHHHHHHHHHHHHHHHHhCCCce-EEEecCcHHHHHHHHHHhcC--------------CCC-EEEEecccccchhcccc
Confidence 355678888889999999999853 34455669999999988743 445 78888888887643 1
Q ss_pred -HHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 185 -AAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 185 -~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
+...|.+. .++.++++ .++.+|+++|++++++. ++++|+++ + +..|...++++|.++|++||+++|+|++
T Consensus 128 ~~~~~g~~~-~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~-~-~~~~~~~~l~~i~~l~~~~~~~li~Dea 199 (405)
T 2vi8_A 128 PVNFSGVQY-NFVAYGVDPETHVIDYDDVREKARLH-----RPKLIVAA-A-AAYPRIIDFAKFREIADEVGAYLMVDMA 199 (405)
T ss_dssp TTSHHHHHS-EEEEECBCTTTCSBCHHHHHHHHHHH-----CCSEEEEC-C-SSCCSCCCHHHHHHHHHHHTCEEEEECT
T ss_pred hhhhcccee-EEEecccccccCCcCHHHHHHHHHhc-----CCeEEEEe-C-CCCCccCCHHHHHHHHHHcCCEEEEEcc
Confidence 11223211 55667765 56889999999999863 16677764 3 2347777899999999999999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|+.+....+.... +++.+|+++.|+||++++|.| |+++++ ++...........+..
T Consensus 200 ~~~g~~~~~~~~~----~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~~~------------------ 255 (405)
T 2vi8_A 200 HIAGLVAAGLHPN----PVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPGIQ------------------ 255 (405)
T ss_dssp TTHHHHHTTSSCC----STTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTTTC------------------
T ss_pred ccccccccCcCCC----ccccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhccccc------------------
Confidence 9965443322111 123679999999999987777 888865 4444332211111110
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHH
Q psy12303 343 CGRHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 343 ~~r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
++... ...++..++..+..++++++.++..++++++.+.|++ . |++++.++ ....+.+.+......
T Consensus 256 ~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 323 (405)
T 2vi8_A 256 GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN-E-GFTLVSGGTDNHLLLVDLRPQQLT---------- 323 (405)
T ss_dssp SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSCSSSEEEEECGGGTCC----------
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCCceEEEEEccCCCCC----------
Confidence 01011 1222334454433467888999999999999999999 6 99987543 334444443211100
Q ss_pred hhhhhHHHHHHHHhcccEEEeeee----e-CCcccEEEEeccc---CCCCHHHHHHHHHHHHHhhcc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQP----L-NDLPNFFRNIISS---AAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~----~-~~~~~~~R~~~~~---~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.+.|+.+..... . ....+++|+++.. +.++++|+++++++|++++++
T Consensus 324 ----~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 324 ----GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp ----HHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 23566777777754333210 1 1114689999432 257899999999999988754
No 110
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=1.1e-23 Score=206.62 Aligned_cols=314 Identities=11% Similarity=-0.019 Sum_probs=212.0
Q ss_pred HHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccC
Q psy12303 89 AGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIK 166 (480)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 166 (480)
+.+.+...+ .....|....+..++++++.+++.+.+|. ++.++++|+|+|+|+..++.++.. |
T Consensus 41 v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~--------------~ 105 (376)
T 3ezs_A 41 IQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLF--------------D 105 (376)
T ss_dssp HHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTT--------------T
T ss_pred HHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcC--------------C
Confidence 335554443 22334444445678899999999999998 667899999999999999988754 4
Q ss_pred --CceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC--
Q psy12303 167 --GQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP-- 242 (480)
Q Consensus 167 --g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~-- 242 (480)
|+ .|+++.++|.++...+...|. +++.+|.++++.+++ +|+++++++ +++|++++++|++|.+.|
T Consensus 106 ~~gd-~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~-~l~~~~~~~------~~~v~~~~p~nptG~~~~~~ 174 (376)
T 3ezs_A 106 YQNP-TIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKENDFTP-SLNEKELQE------VDLVILNSPNNPTGRTLSLE 174 (376)
T ss_dssp CSSC-EEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTSCC-CCCHHHHHH------CSEEEECSSCTTTCCCCCHH
T ss_pred CCCC-EEEEecCCcHhHHHHHHHcCC---EEEEcccCCCCCcch-hHHhhhccC------CCEEEEcCCCCCcCCCCCHH
Confidence 45 788888999999999999988 889999887655666 788888765 889999999999999977
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCC-------CCCCccceeCccccCC-CcccceEEEEeCchhhH
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTG-------IERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLI 313 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-------~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~ 313 (480)
+++|.++|++||+++|+|++|+.+........ .... ..+.++++.|++|+++ .+.++|+++. ++++..
T Consensus 175 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~ 251 (376)
T 3ezs_A 175 ELISWVKLALKHDFILINDECYSEIYENTPPPS--LLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-DSRLLE 251 (376)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCC--HHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-CHHHHH
T ss_pred HHHHHHHHHHHcCcEEEEEccchhhccCCCCCC--HHHccccccccccCcEEEEecchhccCCccceeEEEee-CHHHHH
Confidence 67777789999999999999998665321110 1100 1256788889999996 4467888875 454444
Q ss_pred hhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 314 SCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 314 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
......... +.....+..+++...+ ..+.+++..++..++.+++.+.|+ ++.
T Consensus 252 ~~~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~----~~~-- 304 (376)
T 3ezs_A 252 KYKAFRAYL---------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK----NTL-- 304 (376)
T ss_dssp HHHHHHTTT---------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST----TCC--
T ss_pred HHHHHHhhh---------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc----CCC--
Confidence 332110000 0001223333333322 134467777888888888888776 332
Q ss_pred cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeC---CcccEEEEecccCCCCHHHHHH
Q psy12303 393 LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLN---DLPNFFRNIISSAAVTEGDIDF 468 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~---~~~~~~R~~~~~~~~t~~di~~ 468 (480)
.|..+.+++...+ . ..++.+.|.+ .|+.+.....+. ...+++|+++. .++++|++
T Consensus 305 -~~~~~~~~~~~~~-~----------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~---~~~~~i~~ 363 (376)
T 3ezs_A 305 -IYPYSFYVYLPVQ-N----------------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV---YDTPLLEK 363 (376)
T ss_dssp -CCSBSSEEEEECS-C----------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC---SCHHHHHH
T ss_pred -CCCcceEEEEECC-C----------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc---CCHHHHHH
Confidence 3555555443222 1 2356677777 675544322221 12579999943 38999999
Q ss_pred HHHHHHHhhcc
Q psy12303 469 LLTEMDRLGHD 479 (480)
Q Consensus 469 ~~~~l~~~~~~ 479 (480)
++++|++++++
T Consensus 364 ~l~~l~~~l~~ 374 (376)
T 3ezs_A 364 PLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 111
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.93 E-value=3.5e-25 Score=219.75 Aligned_cols=305 Identities=15% Similarity=0.109 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH---HHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV---RSCAAV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~---~~~~~~ 187 (480)
..+|..+++++++++|.++.. +++++||+|+..++.++.. ||+ .|+++..+|+++ ..++..
T Consensus 68 ~~~e~~ar~~la~~~g~~~~~-i~~~sGt~a~~~~~~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~~~ 131 (407)
T 2dkj_A 68 DRVESLAIERAKALFGAAWAN-VQPHSGSQANMAVYMALME--------------PGD-TLMGMDLAAGGHLTHGSRVNF 131 (407)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE-CCCSSHHHHHHHHHHHHCC--------------TTC-EEEEECGGGTCCGGGTCTTSH
T ss_pred HHHHHHHHHHHHHHhCCCcce-EEecchHHHHHHHHHHhcC--------------CCC-EEEEecccccCccchHHHHHh
Confidence 366766778999999997633 4555677899999988743 445 788888888877 344444
Q ss_pred cCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 188 CGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
.|... ..+.+++++ ++.+|+++|++++++. ++++|+++.++++ .+.|+++|.++|++||+++|+|++|+.+
T Consensus 132 ~g~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g 203 (407)
T 2dkj_A 132 SGKLY-KVVSYGVRPDTELIDLEEVRRLALEH-----RPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAG 203 (407)
T ss_dssp HHHHS-EEEEECCCTTTSSCCHHHHHHHHHHH-----CCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHH
T ss_pred cCceE-EEEecCCCcccCccCHHHHHHHHhhc-----CCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEcccccc
Confidence 45411 233344343 6789999999999852 1778888777775 7889999999999999999999999986
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
....+.... . .+.+|+++.|+||+++++.+ |++++++++...........+.. .+..
T Consensus 204 ~~~~~~~~~-~---~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~------------------~~~~ 260 (407)
T 2dkj_A 204 LVAAGLHPN-P---LPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ------------------GGPL 260 (407)
T ss_dssp HHHTTCSCC-C---TTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC------------------SSCC
T ss_pred ccccCccCC-c---cccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc------------------CCCc
Confidence 543332111 1 22479999999999987665 88887655554433211111110 0000
Q ss_pred C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHHhhhh
Q psy12303 347 N-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNILGEI 424 (480)
Q Consensus 347 ~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 424 (480)
. ...++..++..+..++++++.++..++++++.+.|++ . |++++.++ ....+++.+......
T Consensus 261 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~-------------- 324 (407)
T 2dkj_A 261 EHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR-R-GYRIVTGGTDNHLFLVDLRPKGLT-------------- 324 (407)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEGGGSCSSSEEEEECGGGTCC--------------
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-C-CceeecCCCCceEEEEECcccCCC--------------
Confidence 1 1123344555443467888999999999999999999 6 89887543 444555543211100
Q ss_pred hHHHHHHHHhcccEEEeeee-----eCCcccEEEEecccC---CCCHHHHHHHHHHHHHhhc
Q psy12303 425 TPILKGRMMQAGTMMVGYQP-----LNDLPNFFRNIISSA---AVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 425 ~~~i~~~l~~~g~~~~~~~~-----~~~~~~~~R~~~~~~---~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|.+.|+.+..... .....+++|+++..+ .+|++|+++++++|+++++
T Consensus 325 ~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 386 (407)
T 2dkj_A 325 GKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALL 386 (407)
T ss_dssp HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHh
Confidence 23566778788854433211 111246899994322 3799999999999998764
No 112
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.93 E-value=3.9e-24 Score=214.30 Aligned_cols=309 Identities=15% Similarity=0.102 Sum_probs=188.9
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCC---eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH-
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGD---SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR- 182 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~---~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~- 182 (480)
.+...++|+.+++++++++|.+... .++++|||+||..++.++.+ ||+ .|+++...|.++.
T Consensus 95 ~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~--------------pGD-~Vl~~~~~h~g~l~ 159 (490)
T 2a7v_A 95 AEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQ--------------PHD-RIMGLDLPDGGHLT 159 (490)
T ss_dssp ---CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC--------------SCE-ECCC----------
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcC--------------CCC-EecccCcccccccc
Confidence 3455688988999999999997642 46677999999999988754 656 7888887775432
Q ss_pred --H-----HHHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC
Q psy12303 183 --S-----CAAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN 254 (480)
Q Consensus 183 --~-----~~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~ 254 (480)
. .+...|... .++.++++ +++.+|+++|++++++. +|++|+++.+++ |...|+++|.++|++||
T Consensus 160 h~~~~~~~~i~~~g~~~-~~~~~~vd~~~~~iD~d~le~~l~~~-----~~klIi~~~s~~--~~~~dl~~i~~ia~~~g 231 (490)
T 2a7v_A 160 HGYMSDVKRISATSIFF-ESMPYKLNPKTGLIDYNQLALTARLF-----RPRLIIAGTSAY--ARLIDYARMREVCDEVK 231 (490)
T ss_dssp ----------------------CCBCTTTCSBCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHTT
T ss_pred chhhhcchhHHHcCCeE-EEEecccccccCCcCHHHHHHHHhhc-----CCcEEEEcCCCC--CCcccHHHHHHHHHHcC
Confidence 1 234445422 33455555 46899999999999764 277887765544 56779999999999999
Q ss_pred cEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch--------------hhHhhhcCCc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG--------------LLISCNQMSA 320 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~--------------~~~~~~~~~~ 320 (480)
+++|+|+||+.+......... .+ +++|++++++||++++|.| |+++.++.. +......
T Consensus 232 ~~livD~Ah~~glv~~g~~~~-~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~--- 303 (490)
T 2a7v_A 232 AHLLADMAHISGLVAAKVIPS-PF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINF--- 303 (490)
T ss_dssp CEEEEECGGGHHHHHTTSSCC-GG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHH---
T ss_pred CEEEEccccccccccCCcCCC-CC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHH---
Confidence 999999999876553332222 12 2689999999999988765 888877641 1111110
Q ss_pred ccccccccccCcccCCCCccccCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-cee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHND-IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~-~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~ 398 (480)
.++. +.+.+.... ..++..++...-.+.++++.++..+++++|.+.|.+ .|++++... ...
T Consensus 304 -~~~~--------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~--~G~~v~~~~t~t~ 366 (490)
T 2a7v_A 304 -AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE--RGYSLVSGGTDNH 366 (490)
T ss_dssp -HHTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCSSS
T ss_pred -Hhcc--------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH--cCcEEecCCCCCe
Confidence 0000 011111111 122233444332345688889999999999999999 599987532 334
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-----cccEEEEec---ccCCCCHHHHHHHH
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-----LPNFFRNII---SSAAVTEGDIDFLL 470 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-----~~~~~R~~~---~~~~~t~~di~~~~ 470 (480)
.+.+.+.+..+. ..++.+.|.+.|+ .+......+ .+..+|++. .+...+++|+++++
T Consensus 367 lv~vdl~~~g~~--------------~~~~~~~L~~~GI-~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~ 431 (490)
T 2a7v_A 367 LVLVDLRPKGLD--------------GARAERVLELVSI-TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV 431 (490)
T ss_dssp EEEEECTTTTCC--------------HHHHHHHHHHTTE-ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred EEEEEeCCCCCC--------------HHHHHHHHHhCCe-EEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHH
Confidence 444433222211 2345567767774 444321111 146899963 35567999999999
Q ss_pred HHHHHhhc
Q psy12303 471 TEMDRLGH 478 (480)
Q Consensus 471 ~~l~~~~~ 478 (480)
+.|.++++
T Consensus 432 ~~i~~~l~ 439 (490)
T 2a7v_A 432 DFIDEGVN 439 (490)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 113
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=5.6e-24 Score=211.74 Aligned_cols=308 Identities=13% Similarity=0.116 Sum_probs=197.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---
Q psy12303 107 APVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS--- 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~--- 183 (480)
.+....+++.+++++++++|.++.++++++ ||+|+..++.++.+ ||+ .|+++..+|.++..
T Consensus 66 ~~~~~~~~~~~~~~la~~~g~~~~~i~~~s-Gt~a~~~~~~~~~~--------------~gd-~vl~~~~~~~~~~~~~~ 129 (417)
T 3n0l_A 66 CEFVDEIETLAIERCKKLFNCKFANVQPNS-GSQANQGVYAALIN--------------PGD-KILGMDLSHGGHLTHGA 129 (417)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSS-HHHHHHHHHHHHSC--------------TTC-EEEEECC----------
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcceEecc-HHHHHHHHHHHhcC--------------CCC-EEEecccccccccchhh
Confidence 355678888899999999999775565555 58999999988743 556 78888888877655
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.....|.+. .++.+++++++.+|+++|++++++. +|++|+++++++ |.+.|+++|.++|++||+++|+|++|
T Consensus 130 ~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~ 201 (417)
T 3n0l_A 130 KVSSSGKMY-ESCFYGVELDGRIDYEKVREIAKKE-----KPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAH 201 (417)
T ss_dssp ------CCS-EEEEECCCTTSSCCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred hhhhhccee-eeEeccCCCCCCcCHHHHHHHHHhc-----CCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECcc
Confidence 334444432 4566777777889999999999843 178888888764 99999999999999999999999998
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+.+......... . +..+|+++.|+||++++|. .|+++.+++.+..........+.. +
T Consensus 202 ~~g~~~~~~~~~-~---~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~------------------~ 258 (417)
T 3n0l_A 202 IAGLVVAGEHPS-P---FPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAKKINSAIFPGIQ------------------G 258 (417)
T ss_dssp THHHHHTTSSCC-C---TTTCSEEEEESSTTTCSCS-CEEEEESCHHHHHHHHHHHTTTTC------------------S
T ss_pred chhhhhcccCCC-c---cccceEEEeeCccccCCCC-eeEEEECCHHHHHHHhhhhCCccc------------------C
Confidence 766553332211 1 2257999999999997665 488777655554433211111100 0
Q ss_pred CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc-eeEEEEEeecCccCCCchhhHHHHh
Q psy12303 344 GRH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-MVNVSFWYLPTRVRNMPHEKRLNIL 421 (480)
Q Consensus 344 ~r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~l 421 (480)
+.. ....++..++.....+++.++.++..++++++.+.|.+ .|++++..+. ...+.+.+.+....
T Consensus 259 ~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~----------- 325 (417)
T 3n0l_A 259 GPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD--RKFKLVSDGTDNHLVLMSFLDREFS----------- 325 (417)
T ss_dssp SCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCSSSEEEEECTTSSSC-----------
T ss_pred CcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--CCceeccCCCCceEEEEEcccCCCC-----------
Confidence 000 12223344444434466788899999999999999999 7888864322 33333333222111
Q ss_pred hhhhHHHHHHHHhcccEEEeeeeeCC------cccEEEEecc---cCCCCHHHHHHHHHHHHHhhc
Q psy12303 422 GEITPILKGRMMQAGTMMVGYQPLND------LPNFFRNIIS---SAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 422 ~~~~~~i~~~l~~~g~~~~~~~~~~~------~~~~~R~~~~---~~~~t~~di~~~~~~l~~~~~ 478 (480)
...+.+.|.+.|+.+... .... ....+|+++. ....++++|+++++.|+++++
T Consensus 326 ---~~~~~~~l~~~gi~v~~~-~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 326 ---GKDADLALGNAGITANKN-TVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp ---HHHHHHHHHHTTEECEEC-CCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCeEEecc-ccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 234566777778543321 1110 1357999842 223679999999999998765
No 114
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.93 E-value=1.3e-24 Score=214.90 Aligned_cols=311 Identities=12% Similarity=0.018 Sum_probs=201.2
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCC-CCeEE-CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQG-GDSIL-APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VRS 183 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~~-~~~~~-t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~~ 183 (480)
++...++.+++++++++++|+++ .++++ |+|||+|+..++.++.+ || +++++...|.. ...
T Consensus 73 ~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~--------------~g--v~~v~~~~~~~~~~~ 136 (398)
T 2fyf_A 73 QAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID--------------KR--SLHLTYGEFSAKFAS 136 (398)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS--------------SC--EEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC--------------CC--eEEEeCCHHHHHHHH
Confidence 45556677889999999999974 57888 99999999999987742 32 23335555532 233
Q ss_pred HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 184 CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 184 ~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.+...+.+. +++.+|.+.+...+. + ++ .+|++|++++++|++|.+.|+++|.++ +|+++|+|++|
T Consensus 137 ~~~~~~~g~-~~~~v~~~~g~~~~~-~----i~------~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~ 201 (398)
T 2fyf_A 137 AVSKNPFVG-EPIIITSDPGSAPEP-Q----TD------PSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATS 201 (398)
T ss_dssp HHHHCTTSC-CCEEEECCTTCCCCC-C----CC------TTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTT
T ss_pred HHHHhCCCC-ceEEEecCCCCCCCc-c----cc------CCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEecc
Confidence 455553222 678888874333332 1 22 238899999999999999999999887 89999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc------CCcccccccccccCcccCCC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ------MSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~ 337 (480)
+.+..+.+. +++|+++.++||+++.|.++|++++++ +.+..... ..++|+....... .+..+
T Consensus 202 ~~~~~~~~~---------~~~di~~~s~sK~~~~~gg~g~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~ 269 (398)
T 2fyf_A 202 GAGGLPVDI---------AETDAYYFAPQKNFASDGGLWLAIMSP-AALSRIEAIAATGRWVPDFLSLPIAVE--NSLKN 269 (398)
T ss_dssp TTTTSCCCG---------GGCSEEEECTTSTTCSCSSEEEEEECH-HHHHHHHHHHHTTCCCCGGGCHHHHHH--HHTTT
T ss_pred ccCCcccCc---------ccCcEEEEecCcccCCCCceEEEEECH-HHHHHhhcccccCCCCCcEEehHHHhh--hcccC
Confidence 887643321 147999999999999876788888754 44333211 0122322110000 00000
Q ss_pred CccccCCCC-CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEec-CC--cee-EEEEEeecCccCC
Q psy12303 338 DKVIQCGRH-NDIFKLWLQWRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLIL-EP--EMV-NVSFWYLPTRVRN 411 (480)
Q Consensus 338 ~~~~~~~r~-~~~l~~~~~l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~-~~--~~~-~v~f~~~~~~~~~ 411 (480)
... .+.. ....++..+++.+...+ ++++.++..++++++.+.|++ .+|++++. .| ..+ .++|.+ +....
T Consensus 270 -~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~-~~~~~- 344 (398)
T 2fyf_A 270 -QTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQE-RPYTTPFVTDPGLRSQVVGTIDF-VDDVD- 344 (398)
T ss_dssp -CCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH-STTEEESCCSGGGBCSSEEEEEE-CTTSC-
T ss_pred -CCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-cCCceeccCChhhcCCcEEEEEC-CCCCC-
Confidence 000 1111 12234455565554555 888999999999999999999 78999864 24 344 555543 22211
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.++|+.+.......+ .+++|++ ++..+|++|+++++++|+++++++
T Consensus 345 -------------~~~l~~~L~~~gI~v~~g~~~~~-~~~iRis-~~~~~t~e~i~~~~~~l~~~l~~~ 398 (398)
T 2fyf_A 345 -------------AGTVAKILRANGIVDTEPYRKLG-RNQLRVA-MFPAVEPDDVSALTECVDWVVERL 398 (398)
T ss_dssp -------------HHHHHHHHHHTTCBCCSCCTTTC-SSEEEEE-CCTTSCHHHHHHHHHHHHHHHHTC
T ss_pred -------------HHHHHHHHHHCCcEEecCcccCC-CCEEEEE-ecCCCCHHHHHHHHHHHHHHHHhC
Confidence 24567788888855432111112 4799999 777889999999999999987764
No 115
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.92 E-value=3.4e-23 Score=204.63 Aligned_cols=318 Identities=11% Similarity=0.002 Sum_probs=213.1
Q ss_pred HHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC---CC-CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 90 GEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ---GG-DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~---~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+...+. ....|....+..++++++.+++.+.+|.+ +. ++++|+|+++|+..++.+++.
T Consensus 49 ~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~-------------- 113 (396)
T 3jtx_A 49 TDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLN-------------- 113 (396)
T ss_dssp HHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhC--------------
Confidence 355555443 23344444456789999999999999954 66 899999999999999988754
Q ss_pred CCc----eEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 166 KGQ----LVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 166 ~g~----~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
||+ ..|+++.++|.++..++...|. +++.+|.+++ +.+|+++|++++++. +++|++++++|++|.+
T Consensus 114 ~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~ 184 (396)
T 3jtx_A 114 PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSV 184 (396)
T ss_dssp C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCC
T ss_pred CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCCCCCCc
Confidence 331 4788888999999999999998 8889998654 578999999999875 8999999999999999
Q ss_pred cChHH---HHHHHHHcCcEEEeeccccccccccccccCccc------CCCCCCccceeCccccCCC-cccceEEEEeCch
Q psy12303 241 DPIEE---IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRL------TGIERADSVTWNPHKLMGT-LLQCSTIHFKQDG 310 (480)
Q Consensus 241 ~~l~~---I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~------~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~ 310 (480)
.|.++ |.++|++||+++|+|++|+.+......... .. ..-.+.++++.|++|.++. +.++|+++. ++.
T Consensus 185 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~ 262 (396)
T 3jtx_A 185 LDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLG-CLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG-DAE 262 (396)
T ss_dssp CCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCC-HHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE-CHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCch-HHhhhhhcccccCcEEEEeccccccCCcccceEEEEe-CHH
Confidence 77555 999999999999999999986543211000 00 0012567888899997554 467888865 554
Q ss_pred hhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy12303 311 LLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKF 389 (480)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~ 389 (480)
+......... +. +.....+...++...+ ..+.+.+..++..++.+++.+.|.+ . +
T Consensus 263 ~~~~~~~~~~-~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~-~--~ 318 (396)
T 3jtx_A 263 LLKNFLLYRT-YH--------------------GSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ-V--F 318 (396)
T ss_dssp HHHHHHHHHH-HH--------------------TCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT-T--S
T ss_pred HHHHHHHHHh-hc--------------------ccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-c--C
Confidence 4443321100 00 0001222333332222 1456788888889999999999988 4 3
Q ss_pred EEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC--------cccEEEEecccCC
Q psy12303 390 YLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND--------LPNFFRNIISSAA 460 (480)
Q Consensus 390 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~--------~~~~~R~~~~~~~ 460 (480)
.+ ..|..+.+++...+. .. ..++.++|.+ .|+. +.++...+ ..+++|+++ ..
T Consensus 319 ~~-~~~~~~~~~~~~~~~-~~--------------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~~~~~~iRis~-~~- 379 (396)
T 3jtx_A 319 DV-KLPDASFYIWLKVPD-GD--------------DLAFARNLWQKAAIQ-VLPGRFLARDTEQGNPGEGYVRIAL-VA- 379 (396)
T ss_dssp CC-CCCSSSSEEEEECTT-SC--------------HHHHHHHHHHHHCEE-CEEGGGGCCCCTTCCTTTTEEEEEC-CS-
T ss_pred Cc-cCCCeeEEEEEECCC-CC--------------HHHHHHHHHHHCCEE-EeCChHhCCcccccCCCCCeEEEEE-cC-
Confidence 33 345555554433322 00 2355666654 4744 43322211 157999994 33
Q ss_pred CCHHHHHHHHHHHHHhh
Q psy12303 461 VTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 461 ~t~~di~~~~~~l~~~~ 477 (480)
++++|++++++|++++
T Consensus 380 -~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 380 -DVATCVKAAEDIVSLY 395 (396)
T ss_dssp -CHHHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHHHHh
Confidence 8999999999999875
No 116
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.8e-25 Score=219.47 Aligned_cols=340 Identities=11% Similarity=0.057 Sum_probs=219.0
Q ss_pred hHHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc
Q psy12303 88 MAGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA 164 (480)
Q Consensus 88 ~~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~ 164 (480)
.+.+.+...+.. ....|....+..++++++.+++.+.+|. +++++++|+||++|+..++.++.+
T Consensus 74 ~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~------------- 140 (447)
T 3b46_A 74 FAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN------------- 140 (447)
T ss_dssp HHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC-------------
Confidence 344555555543 2234544445678888888888888875 446899999999999999988753
Q ss_pred cCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCC------------CCCCCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 165 IKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDK------------RGRLIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 165 ~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~------------~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
||+ .|++..+.|.++...+...|. +++.+|.++ ++.+|+++|++++++. +++|++++
T Consensus 141 -~gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~ 209 (447)
T 3b46_A 141 -AGD-EVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVIINT 209 (447)
T ss_dssp -TTC-EEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEEEES
T ss_pred -CCC-EEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEEEeC
Confidence 455 788888899999999999887 788888754 3679999999988643 89999999
Q ss_pred CCCcccccc---ChHHHHHHHHHcCcEEEeeccccccccccccccCccc-CCCCCCccceeCccccCC-CcccceEEEEe
Q psy12303 233 GTTVLGAFD---PIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRL-TGIERADSVTWNPHKLMG-TLLQCSTIHFK 307 (480)
Q Consensus 233 ~~~~~G~~~---~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~ 307 (480)
++|++|.+. ++++|.++|++||+++++|++|+.+.+..+......+ .+..+.|+++.|++|+++ .+..+|+++.+
T Consensus 210 p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~ 289 (447)
T 3b46_A 210 PHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289 (447)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence 999999985 5899999999999999999999986542211000001 111257889999999998 44568998874
Q ss_pred CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 308 QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
+++++....... .+.. + +.......++..++.... .+.++++.++..++++++.+.|++ .
T Consensus 290 ~~~l~~~l~~~~-~~~~--------------~---~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 350 (447)
T 3b46_A 290 NAELLSYAAKAH-TRIC--------------F---ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE-L 350 (447)
T ss_dssp CHHHHHHHHHHH-HHHT--------------S---SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHH-hhcc--------------C---CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH-C
Confidence 555544332110 0000 0 000011122223333321 345677888899999999999999 5
Q ss_pred CCeEEecCCceeEEEEEeecCc-cC-CCc-hhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCC------cccEEEEec
Q psy12303 387 DKFYLILEPEMVNVSFWYLPTR-VR-NMP-HEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLND------LPNFFRNII 456 (480)
Q Consensus 387 ~g~~~~~~~~~~~v~f~~~~~~-~~-~~~-~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~------~~~~~R~~~ 456 (480)
|+++. .|..+.+++...+.. .. +.. ........ ...++.++|.+ .|+.+.....+.. ..+++|+++
T Consensus 351 -g~~~~-~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~ 426 (447)
T 3b46_A 351 -GLPYT-APEGTYFVLVDFSKVKIPEDYPYPEEILNKG--KDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAV 426 (447)
T ss_dssp -TCCEE-CCSBSSEEEEECTTCCCCTTCCCCGGGSSSC--HHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEEC
T ss_pred -CCeec-CCCeeEEEEEecccccCccccccccccccCC--CHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEE
Confidence 88875 455555544322211 00 000 00000000 02356677764 6744433222211 147999994
Q ss_pred ccCCCCHHHHHHHHHHHHHhh
Q psy12303 457 SSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 457 ~~~~~t~~di~~~~~~l~~~~ 477 (480)
. .++++|++++++|+++.
T Consensus 427 ~---~~~e~l~~~~~~l~~~~ 444 (447)
T 3b46_A 427 C---KDDAYLENAVERLKLLK 444 (447)
T ss_dssp C---SCHHHHHHHHHHGGGGG
T ss_pred e---CCHHHHHHHHHHHHHHH
Confidence 3 38999999999998854
No 117
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.92 E-value=4.4e-24 Score=212.88 Aligned_cols=323 Identities=11% Similarity=0.092 Sum_probs=213.3
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCCC--C-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGWQ--G-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~~--~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
..|....+..++++.+.+++.+.+|.+ + .++++|+|||+|+..++.++.. ||+ .|+++.++|
T Consensus 61 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~--------------~gd-~vl~~~p~~ 125 (422)
T 3fvs_A 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVD--------------EGD-EVIIIEPFF 125 (422)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCC--------------TTC-EEEEEESCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcC--------------CCC-EEEEcCCCc
Confidence 344444556788899999999988864 3 5799999999999999988743 445 788888899
Q ss_pred hhHHHHHHHcCCCCCCeEEeeCCC------------CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc---Ch
Q psy12303 179 YSVRSCAAVCGLGTDNCVEVPSDK------------RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PI 243 (480)
Q Consensus 179 ~s~~~~~~~~g~~~~~v~~v~~~~------------~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l 243 (480)
.++...+...|. +++.+|.+. ++.+|+++|+++++++ +++|++++++|++|.+. ++
T Consensus 126 ~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l 196 (422)
T 3fvs_A 126 DCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTPNNPLGKVFSREEL 196 (422)
T ss_dssp TTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred hhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECCCCCCCCcCCCHHHH
Confidence 999999999988 788888875 3478999999988754 89999999999999997 59
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCCC-cccceEEEEeCchhhHhhhcCCcc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMGT-LLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
++|.++|++||+++|+|++|+.+.+....... ..+....+.++++.|++|.++. +.++|+++.++ ..+.........
T Consensus 197 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~~~~~~~~ 275 (422)
T 3fvs_A 197 ELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD-HIMKHLRTVHQN 275 (422)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH-HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCH-HHHHHHHHHHhh
Confidence 99999999999999999999976543211100 0111111345777899999974 46789888644 343332211000
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---------cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---------GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---------g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.. + . ...+..++....+ ..+.++++.++..++++++.+.|++ . |++++
T Consensus 276 ~~---------------~---~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~ 332 (422)
T 3fvs_A 276 SV---------------F---H---CPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS-V-GLKPI 332 (422)
T ss_dssp TT---------------C---C---CCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEE
T ss_pred cc---------------C---C---CCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH-c-CCeec
Confidence 00 0 0 1222233222222 2356778889999999999999999 5 88876
Q ss_pred cCCceeEEEEEeecCc---cCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeC------CcccEEEEecccCCCC
Q psy12303 393 LEPEMVNVSFWYLPTR---VRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLN------DLPNFFRNIISSAAVT 462 (480)
Q Consensus 393 ~~~~~~~v~f~~~~~~---~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~------~~~~~~R~~~~~~~~t 462 (480)
. |..+.+.+...+.. ........ ... ...++...+.+ .|+.+.....+. ...+++|+++. . +
T Consensus 333 ~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-~--~ 404 (422)
T 3fvs_A 333 I-PQGSYFLITDISDFKRKMPDLPGAV--DEP--YDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV-K--D 404 (422)
T ss_dssp B-CSBSSEEEEECHHHHHHCCCCCCCT--TCC--HHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC-C--C
T ss_pred C-CCeeeEEEEechhhccccccccccc--ccc--cHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec-C--C
Confidence 4 45555444322110 00000000 000 01245555544 564433322221 11579999943 3 9
Q ss_pred HHHHHHHHHHHHHhhccC
Q psy12303 463 EGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 463 ~~di~~~~~~l~~~~~~l 480 (480)
+++|++++++|+++++++
T Consensus 405 ~e~i~~~l~~l~~~l~~l 422 (422)
T 3fvs_A 405 EATLQAMDEKLRKWKVEL 422 (422)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999988764
No 118
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=6.3e-24 Score=207.17 Aligned_cols=284 Identities=13% Similarity=0.060 Sum_probs=198.8
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++++++++|.+++++++|+|||+|+..++.++.+ ||+ .|+++..+|.++...+...|. +
T Consensus 68 ~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~--------------~gd-~Vl~~~p~~~~~~~~~~~~g~---~ 129 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAA--------------EGE-EIGYVHPSYSYYGTLAEVQGA---R 129 (360)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEESSSCTHHHHHHHHHTC---E
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhC--------------CCC-EEEEcCCChHHHHHHHHHCCC---E
Confidence 3567778888998778999999999999999987743 455 788888999999999999998 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
++.+|.++++.+ +++++++ .+++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+... . .
T Consensus 130 ~~~v~~~~~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~--~ 196 (360)
T 3hdo_A 130 VRTFGLTGDFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-N--A 196 (360)
T ss_dssp EEEECBCTTSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-C--C
T ss_pred EEEeeCCCCCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-c--h
Confidence 899999877655 4443221 2568999999999999999999999999999999999999874211 0 0
Q ss_pred CcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW 353 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~ 353 (480)
.+... ..+.++++.|++|+++ .+.++|+++. ++++..........|- ...+..+
T Consensus 197 ~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~-----------------------~~~~~~~ 251 (360)
T 3hdo_A 197 LELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHYN-----------------------LDRLAQA 251 (360)
T ss_dssp THHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSCC-----------------------SCHHHHH
T ss_pred hHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCCC-----------------------CCHHHHH
Confidence 00111 1144577889999987 4467888886 5555444322111110 1223333
Q ss_pred HHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 354 LQWRAK-GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 354 ~~l~~~-g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
++...+ ..+.+++..++..++++++.+.|++ . ++++. ++....+.+.. + .. + ..++.+.|
T Consensus 252 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~~~~~~~~~-~-~~---~-----------~~~l~~~l 312 (360)
T 3hdo_A 252 ACVAALRDQAYLSECCRRIRETREWFTTELRS-I-GYDVI-PSQGNYLFATP-P-DR---D-----------GKRVYDGL 312 (360)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEC-CCSSSEEEEEC-T-TC---C-----------HHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCEEc-CCCccEEEEEC-C-CC---C-----------HHHHHHHH
Confidence 333322 2456788889999999999999999 5 88874 45555444422 1 11 1 24567788
Q ss_pred HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 433 MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.|+.+... ...+..+++|+++ + +++|+++++++|+++.+
T Consensus 313 ~~~gi~v~~~-~~~~~~~~iRis~-~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 313 YARKVLVRHF-SDPLLAHGMRISI-G---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHTTEECBCC-CSTTTTTSEEEEC-C---CHHHHHHHHHHHHHHHC
T ss_pred HHCCEEEEEC-CCCCCCCEEEEEc-C---CHHHHHHHHHHHHHHhc
Confidence 8888544332 2222257999994 3 89999999999998765
No 119
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.92 E-value=3.7e-23 Score=210.17 Aligned_cols=330 Identities=12% Similarity=0.051 Sum_probs=219.2
Q ss_pred CCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 100 NMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 100 ~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
....|...++..++++++.+++.+..|. ++.++++|+|+|+|+..++.++... ||+ .|+++.++
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------------~gd-~Vlv~~p~ 191 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN-------------EKD-GILVPIPQ 191 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCS-------------TTE-EEEEEESC
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCC-------------CCC-EEEEeCCC
Confidence 3456777777889999999999988885 5678999999999999999887521 445 89999999
Q ss_pred chhHHHHHHHcCCCCCCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 178 HYSVRSCAAVCGLGTDNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 178 h~s~~~~~~~~g~~~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
|+++..++...|. +++.++++++ +.+|+++|++++++...+|.++++|++++++||||.+.+ +++|+++|++
T Consensus 192 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~ 268 (500)
T 3tcm_A 192 YPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKN 268 (500)
T ss_dssp CTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred cHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHH
Confidence 9999999999998 7888888764 689999999999987777777999999999999999966 6777777999
Q ss_pred cCcEEEeeccccccccccccccCcc---cCC----CCCCc-cceeCccccC-CC-cccceEEEEe--CchhhHhhhcCCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPR---LTG----IERAD-SVTWNPHKLM-GT-LLQCSTIHFK--QDGLLISCNQMSA 320 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~---~~~----~~~~D-~~~~s~hK~~-~~-p~~~g~~~~~--~~~~~~~~~~~~~ 320 (480)
||+++++|++|+.+.+.......+. ... .+..+ +++.|++|.+ +. +..+|++++. ++...........
T Consensus 269 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~ 348 (500)
T 3tcm_A 269 EGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIAS 348 (500)
T ss_dssp HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHH
T ss_pred cCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHh
Confidence 9999999999998655221100000 001 11222 3455999998 42 3567888873 4444443321110
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh------------cHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK------------GDEGFEKQIDRLMELAEYMVKKIKSMPDK 388 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~------------g~~~~~~~~~~~~~l~~~l~~~l~~~~~g 388 (480)
.+. + .......+....+ -.+...++.++..++++++.+.|++ +||
T Consensus 349 ~~~-------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~g 405 (500)
T 3tcm_A 349 VNL-------------------C---SNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK-LEG 405 (500)
T ss_dssp TTC-------------------C---CCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STT
T ss_pred ccc-------------------C---CCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 000 0 1111222221111 1234567778888999999999999 889
Q ss_pred eEEecCCceeEEEEEeecCccCCCchhhH--HHHhhhhhH-H-HHHHHHhcccEEEeeeee---CCcccEEEEecccCCC
Q psy12303 389 FYLILEPEMVNVSFWYLPTRVRNMPHEKR--LNILGEITP-I-LKGRMMQAGTMMVGYQPL---NDLPNFFRNIISSAAV 461 (480)
Q Consensus 389 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~--~~~l~~~~~-~-i~~~l~~~g~~~~~~~~~---~~~~~~~R~~~~~~~~ 461 (480)
+++. +|+.++++|.-.... .... .+.+..... . +.+.|.+.|++++....+ .+ ..++|+++. +
T Consensus 406 ~~~~-~~~g~~~~~~~~~lp-----~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g-~~~iRis~~---~ 475 (500)
T 3tcm_A 406 ITCN-EAEGAMYVFPQICLP-----QKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPG-TWHFRCTIL---P 475 (500)
T ss_dssp EECC-CCCBTTEECCEECCC-----HHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTT-CCBEEEESC---S
T ss_pred cEEe-cCCeEEEEeeeecCc-----hhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCC-CCEEEEEEC---C
Confidence 9985 677777766322110 0000 000000011 1 234555667554432222 22 468999944 7
Q ss_pred CHHHHHHHHHHHHHhhcc
Q psy12303 462 TEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~~ 479 (480)
++++|++++++|+++.++
T Consensus 476 ~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 476 QEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp CTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999887653
No 120
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.92 E-value=3.5e-23 Score=202.24 Aligned_cols=291 Identities=9% Similarity=-0.009 Sum_probs=198.3
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+++++++|+|+|+++..++.++ . |+ .|++..++|+++...+...|. +
T Consensus 62 ~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~--------------gd-~vl~~~p~y~~~~~~~~~~g~---~ 121 (364)
T 1lc5_A 62 FHLHQALARHHQVPASWILAGNGETESIFTVASGL--K--------------PR-RAMIVTPGFAEYGRALAQSGC---E 121 (364)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--C--------------CS-EEEEEESCCTHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--C--------------CC-eEEEeCCCcHHHHHHHHHcCC---e
Confidence 34566688888988778999999999999998877 2 14 688888899999999999887 7
Q ss_pred eEEeeCCCCCCCC-HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccc
Q psy12303 195 CVEVPSDKRGRLI-PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 195 v~~v~~~~~~~~d-~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~ 270 (480)
++.+|.+++..++ ++++.+.+++ ++++|++++++|++|.+.| +++|.++|++||+++|+|++|+.+....
T Consensus 122 ~~~v~~~~~~~~~~l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 195 (364)
T 1lc5_A 122 IRRWSLREADGWQLTDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE 195 (364)
T ss_dssp EEEEECCGGGTTCCCTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC
T ss_pred EEEEeCCcccccchhHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc
Confidence 8889987522234 3444443322 3788999999999999988 8999999999999999999998765421
Q ss_pred ccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI 349 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 349 (480)
.. .. ...+..+.|+++.|+||+++.| .++|++++.+++...........| ....
T Consensus 196 ~~-~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-----------------------~~~~ 250 (364)
T 1lc5_A 196 TG-FI-PALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW-----------------------SVNA 250 (364)
T ss_dssp CC-SG-GGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT-----------------------CSCH
T ss_pred cc-hh-hHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCCC-----------------------CCCH
Confidence 00 01 1111125678889999999843 567888834555544332211110 0233
Q ss_pred hHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHH
Q psy12303 350 FKLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPIL 428 (480)
Q Consensus 350 l~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i 428 (480)
+..+++...+. .+.+++..++..++++++.+.|++ .|++++. ++....+.+.+ +.. ..++
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~g~~~~~~~-~~~----------------~~~l 311 (364)
T 1lc5_A 251 LAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ-LPLLTVY-PGRANYLLLRC-ERE----------------DIDL 311 (364)
T ss_dssp HHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT-STTEEEC-CCSSSEEEEEE-SCT----------------TCCH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEC-CCCCeEEEEEC-CCc----------------HHHH
Confidence 44444444442 356778888889999999999999 8899875 45555554433 211 0135
Q ss_pred HHHHHhcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 429 KGRMMQAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 429 ~~~l~~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|.++|+.+.....+.+ ..+++|+++. +++|++++++.|++++++
T Consensus 312 ~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 312 QRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp HHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC--
T ss_pred HHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhc
Confidence 6777788754433222211 1479999942 689999999999988764
No 121
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=6.2e-23 Score=198.13 Aligned_cols=281 Identities=15% Similarity=0.068 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.++.++++|+|+|+++..++.++ ||+ .|+++.++|+++...++..|. +
T Consensus 54 ~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~----------------~gd-~vl~~~p~~~~~~~~~~~~g~---~ 113 (337)
T 3p1t_A 54 PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF----------------SSM-RFVTAWPGFDGYRARIAVSGL---R 113 (337)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS----------------TTS-EEEEESSSCSHHHHHHTTSCC---E
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc----------------CCC-eEEEeCCCcHHHHHHHHHcCC---E
Confidence 45677788899998889999999999988887665 235 788889999999999998887 8
Q ss_pred eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccccc
Q psy12303 195 CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYR 274 (480)
Q Consensus 195 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~ 274 (480)
++.+|.++++.+|+++|+++ . ++++|++++++|++|.+.|++++.++|+++++ +++|++|+.+.....
T Consensus 114 ~~~v~~~~~~~~d~~~l~~~--~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~--- 181 (337)
T 3p1t_A 114 HFEIGLTDDLLLDPNDLAQV--S------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRA--- 181 (337)
T ss_dssp EEEECBCTTSSBCHHHHTTC--C------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSS---
T ss_pred EEEecCCCCCCCCHHHHHhh--c------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccc---
Confidence 89999988889999999875 1 27899999999999999999999999999997 566999986432111
Q ss_pred CcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHH
Q psy12303 275 HPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLW 353 (480)
Q Consensus 275 ~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~ 353 (480)
........++++.|++|+++ .+.++|+++. ++............+ ....+...
T Consensus 182 --~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~-----------------------~~~~~~~~ 235 (337)
T 3p1t_A 182 --RGLAYGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQWFC-----------------------NVGTLDLH 235 (337)
T ss_dssp --SCCCCBTTEEEEEESSSTTCCTTTCCEEEEC-CHHHHHHHHTTSCTT-----------------------CSCHHHHH
T ss_pred --cccccCCCEEEEeeCchhccCcchheEEEEe-CHHHHHHHHhhcCCC-----------------------CCCHHHHH
Confidence 11122356788899999997 4567788875 444444432211000 01222333
Q ss_pred HHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH
Q psy12303 354 LQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM 432 (480)
Q Consensus 354 ~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l 432 (480)
+....+. .+.+.+.+++..++++++.+.|++ . |+++. ++..+.+.+... . ...+.+.|
T Consensus 236 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~-~-----------------~~~~~~~l 294 (337)
T 3p1t_A 236 ALEAALDNDRAREAHIAKTLAQRRRVADALRG-L-GYRVA-SSEANFVLVENA-A-----------------GERTLRFL 294 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCBC-CCSSSEEEEECT-T-----------------THHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-cCEEC-CCCCeEEEEEcC-C-----------------HHHHHHHH
Confidence 3333332 345677778888889999999999 5 88764 555555554321 1 12455677
Q ss_pred HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 433 MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.|+. +.++...+..+++|+++. +++|+++++++|+++.++
T Consensus 295 ~~~gi~-v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 295 RERGIQ-VKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 336 (337)
T ss_dssp HHTTEE-CEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHTC-
T ss_pred HHCCeE-EEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHhhc
Confidence 778744 443333333579999943 799999999999988653
No 122
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=7.6e-25 Score=214.29 Aligned_cols=301 Identities=17% Similarity=0.138 Sum_probs=199.0
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .+++++|||+|+..++.++.-. ||+ .|+++..+|+++..++...|. +
T Consensus 38 ~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~-------------~gd-~Vi~~~~~~~~~~~~~~~~G~---~ 98 (367)
T 3nyt_A 38 TELEDRLADFVGAK--YCISCANGTDALQIVQMALGVG-------------PGD-EVITPGFTYVATAETVALLGA---K 98 (367)
T ss_dssp HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCTHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCC-------------CcC-EEEECCCccHHHHHHHHHcCC---E
Confidence 34556688888887 5999999999999999877321 545 788999999999999999988 8
Q ss_pred eEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.++++++ +.+|+++|+++++++ +++|+ +++++|...|+++|.++|++||+++|+|++|+.+......
T Consensus 99 ~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~- 168 (367)
T 3nyt_A 99 PVYVDIDPRTYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK- 168 (367)
T ss_dssp EEEECBCTTTCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE-
T ss_pred EEEEecCCccCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe-
Confidence 899999865 899999999998654 78777 5678999999999999999999999999999876542221
Q ss_pred cCcccCCCCCCccceeC--ccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchH
Q psy12303 274 RHPRLTGIERADSVTWN--PHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFK 351 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s--~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 351 (480)
.. +. ..|++++| +||+++++...|+++.+++.+............ .. .+... ....+.+...+.
T Consensus 169 ~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~---~~----~~~~~--~~g~~~~~~~~~ 234 (367)
T 3nyt_A 169 RS----CN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQ---DR----RYHHI--RVGVNSRLDTLQ 234 (367)
T ss_dssp ET----TS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTE---EE----TTEEC--SCCCBCCCCHHH
T ss_pred ec----cC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCC---Cc----Cceee--ccCcCCCccHHH
Confidence 11 11 12888888 489998634467777666655443322111000 00 00000 011222244555
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
+++.+.. .+.+++..++..++++++.+.|.+ . ++.+...+......+...+..... ..++.+.
T Consensus 235 aa~~~~~--l~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~ 297 (367)
T 3nyt_A 235 AAILLPK--LEIFEEEIALRQKVAAEYDLSLKQ-V-GIGTPFIEVNNISVYAQYTVRMDN-------------RESVQAS 297 (367)
T ss_dssp HHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHH-T-TCCCCCCCTTEECCCSSEEEECSS-------------HHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-C-CeeccCCCCCCceeeEEEEEEeCC-------------HHHHHHH
Confidence 5555544 355677888899999999999999 5 555432222111111100001100 2356677
Q ss_pred HHhcccEEEeeee--------eC---C--------cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 432 MMQAGTMMVGYQP--------LN---D--------LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 432 l~~~g~~~~~~~~--------~~---~--------~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
|.++|+....... +. . ....+|++ +++.+|++||+++++.|++.
T Consensus 298 L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp-~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 298 LKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLP-MHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHC-
T ss_pred HHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHHHHHH
Confidence 7777754221110 00 0 03579999 89999999999999999864
No 123
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=2.6e-24 Score=208.71 Aligned_cols=295 Identities=14% Similarity=0.138 Sum_probs=186.9
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---HHHHcCCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS---CAAVCGLGT 192 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~---~~~~~g~~~ 192 (480)
++++++++++|.+. +++++|||+|+..++.++.+ ||+ .|+++..+|++... .+...|.
T Consensus 42 ~l~~~la~~~g~~~--~~~~~~gt~a~~~~~~~~~~--------------~gd-~Vl~~~~~~~~~~~~~~~~~~~g~-- 102 (347)
T 1jg8_A 42 ELERLAAETFGKEA--ALFVPSGTMGNQVSIMAHTQ--------------RGD-EVILEADSHIFWYEVGAMAVLSGV-- 102 (347)
T ss_dssp HHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCC--------------TTC-EEEEETTCHHHHSSTTHHHHHTCC--
T ss_pred HHHHHHHHHhCCce--EEEecCcHHHHHHHHHHhcC--------------CCC-EEEEcCcchhhhccccchhhccCe--
Confidence 45567888899864 78999999999988876543 556 78888899987543 4566676
Q ss_pred CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc-ccccC---hHHHHHHHHHcCcEEEeecccccccc
Q psy12303 193 DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL-GAFDP---IEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 193 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
+++.+ .++++.+|+++|++++++....+.++++|++++++|++ |.+.| +++|.++|++||+++|+|++|..+..
T Consensus 103 -~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~ 180 (347)
T 1jg8_A 103 -MPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNAS 180 (347)
T ss_dssp -EEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHH
T ss_pred -EEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcch
Confidence 67777 55567789999999886410011248999999999999 99866 57889999999999999999754321
Q ss_pred cc-ccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 269 LS-KKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 269 ~~-~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
.. +....+.. ..+|++++++||++++| .|++++.+++...........+ .. +.+.
T Consensus 181 ~~~~~~~~~~~---~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~ 236 (347)
T 1jg8_A 181 IASGVPVKEYA---GYADSVMFCLSKGLCAP--VGSVVVGDRDFIERARKARKML-GG------------------GMRQ 236 (347)
T ss_dssp HHHCCCHHHHH---HTCSEEEEESSSTTCCS--SCEEEEECHHHHHHHHHHHHHH-TC------------------CCSS
T ss_pred hhcCCChHHhc---ccccEEEEecccccCCC--ceEEEEcCHHHHHHHHHHHHHc-CC------------------chhH
Confidence 11 10000011 15788888999999876 4545555665544322111110 00 0001
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe-cCCceeEEEEEeecCccCCCchhhHHHHhhhhhH
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI-LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITP 426 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~ 426 (480)
..+..++.+..+ +...+.+++..++++++.+.|++ . ++++. .++..+.+++.+ +.. +.+ ..
T Consensus 237 ~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~-~~~--~~~-----------~~ 298 (347)
T 1jg8_A 237 AGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKE-I-GYSVNPEDVKTNMVILRT-DNL--KVN-----------AH 298 (347)
T ss_dssp THHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHH-H-TCBCCGGGCCSSEEEEEC-TTS--SSC-----------HH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh-c-CceeccCCCcceEEEEEc-ccc--cCC-----------HH
Confidence 122222222222 11122234445677888899988 6 77653 234445444433 210 110 23
Q ss_pred HHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 427 ILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 427 ~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
++.+.|.+.|+.+... + .+++|++ ++..++++|+++++++|++++++
T Consensus 299 ~~~~~l~~~gi~v~~~----~-~~~iRl~-~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 299 GFIEALRNSGVLANAV----S-DTEIRLV-THKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHTEECEEE----E-TTEEEEE-CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecC----C-CCeEEEE-eCCCCCHHHHHHHHHHHHHHHHh
Confidence 5667777778544332 1 3689999 77788999999999999987654
No 124
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.92 E-value=2.8e-23 Score=207.23 Aligned_cols=320 Identities=12% Similarity=0.091 Sum_probs=209.9
Q ss_pred hhcChhhHHHHHHHHHHHHHHhCCCC---------CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEec
Q psy12303 104 YEIAPVFILMETVVLEKMRQIIGWQG---------GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTS 174 (480)
Q Consensus 104 ~~~~~~~~~~e~~~~~~la~~~g~~~---------~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~ 174 (480)
|....+..++.+++.+++++..|.+. +++++|+|+++|+..++.++.+ ||+ .|++.
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~gd-~Vlv~ 138 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN--------------PGD-NVLLD 138 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC--------------CCC-EEEEe
Confidence 43444556788889999999899853 4799999999999999988754 555 78888
Q ss_pred CCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHH------HCCCccEEEEe-ccCCCccccccChH---
Q psy12303 175 DQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERK------AKGDIPFFVNC-TSGTTVLGAFDPIE--- 244 (480)
Q Consensus 175 ~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~------~~~~~~~~v~~-~~~~~~~G~~~~l~--- 244 (480)
.++|+++...++..|. +++.+|.++++ +|+++|++++++.. ..+.++++|++ ++++||||.+.+.+
T Consensus 139 ~p~y~~~~~~~~~~g~---~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~ 214 (425)
T 2r2n_A 139 EPAYSGTLQSLHPLGC---NIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKK 214 (425)
T ss_dssp SSCCHHHHHHHGGGTC---EEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHH
T ss_pred CCCcHHHHHHHHHcCC---EEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHH
Confidence 9999999999998887 78888887654 89999999986311 00123667755 68999999998755
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCC--CCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTG--IERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEY 322 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 322 (480)
+|.++|++||+++++|++|+.+.+...... .+.. ..+.++++.+++|+++.+..+|+++.++ .+..........+
T Consensus 215 ~l~~~a~~~~~~li~De~~~~~~~~g~~~~--~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~-~l~~~l~~~~~~~ 291 (425)
T 2r2n_A 215 EIYELARKYDFLIIEDDPYYFLQFNKFRVP--TFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK-PLIERVILHIQVS 291 (425)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSSCCC--CTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH-HHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCEEEEECCcccccCCCCCCC--CccccCCCCCEEEEccchhhccCccceEEEecCH-HHHHHHHHHHHHh
Confidence 999999999999999999987544221100 1111 1234577889999998445689998764 3433322110000
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG----DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g----~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
. + +...+...++...+..++ .+.++++.++..++++++.+.|+++.+++..+..|..+
T Consensus 292 ~---------------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g 353 (425)
T 2r2n_A 292 T---------------L---HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAG 353 (425)
T ss_dssp T---------------C---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBS
T ss_pred c---------------C---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCce
Confidence 0 0 000011122233333322 23456666777888899999998724676433456666
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHH-HHHHHHhcccEEEeeeeeCC----cccEEEEecccCCCCHHHHHHHHHHH
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPI-LKGRMMQAGTMMVGYQPLND----LPNFFRNIISSAAVTEGDIDFLLTEM 473 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~-i~~~l~~~g~~~~~~~~~~~----~~~~~R~~~~~~~~t~~di~~~~~~l 473 (480)
++++...+.... ..+ +.+.+.+.|+.+.....+.. ..+++|+++. . .++++|++++++|
T Consensus 354 ~~~~~~~~~~~~--------------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~-~-~~~~~i~~~~~~l 417 (425)
T 2r2n_A 354 MFLWIKVKGIND--------------VKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS-S-ASPEQMDVAFQVL 417 (425)
T ss_dssp SEEEEEETTCSC--------------CHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECS-S-CCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCC--------------HHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeC-C-CCHHHHHHHHHHH
Confidence 665544433211 112 45667778855443222211 1479999943 2 5999999999999
Q ss_pred HHhhcc
Q psy12303 474 DRLGHD 479 (480)
Q Consensus 474 ~~~~~~ 479 (480)
++++++
T Consensus 418 ~~~l~~ 423 (425)
T 2r2n_A 418 AQLIKE 423 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987754
No 125
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.92 E-value=1.6e-23 Score=206.75 Aligned_cols=309 Identities=13% Similarity=0.082 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|.+ ++++|+|||+|+..++.++.-. ||+ .|+++..+|+++..++...|.
T Consensus 41 ~~~l~~~la~~~~~~--~~~~~~~gt~al~~~~~~~~~~-------------~gd-~Vl~~~~~~~~~~~~~~~~g~--- 101 (393)
T 1mdo_A 41 NQELEAAFCRLTGNQ--YAVAVSSATAGMHIALMALGIG-------------EGD-EVITPSMTWVSTLNMIVLLGA--- 101 (393)
T ss_dssp HHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHhCCC--cEEEecChHHHHHHHHHHcCCC-------------CCC-EEEeCCCccHhHHHHHHHCCC---
Confidence 345566788888886 5899999999999999876211 445 788999999999999999888
Q ss_pred CeEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccccccc
Q psy12303 194 NCVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKK 272 (480)
Q Consensus 194 ~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~ 272 (480)
+++.+|.+++ +.+|+++|+++++++ +++|++++ ++|.+.|+++|.++|+++|+++|+|++|+.+......
T Consensus 102 ~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~---~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 172 (393)
T 1mdo_A 102 NPVMVDVDRDTLMVTPEHIEAAITPQ------TKAIIPVH---YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR 172 (393)
T ss_dssp EEEEECBCTTTCCBCHHHHHHHCCTT------EEEECCBC---GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE
T ss_pred EEEEEeccCCcCCCCHHHHHHhcCCC------ceEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe
Confidence 8889998865 789999999998754 88888764 7899999999999999999999999999976443211
Q ss_pred ccCcccCCCCC-CccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc---cCC--
Q psy12303 273 YRHPRLTGIER-ADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI---QCG-- 344 (480)
Q Consensus 273 ~~~~~~~~~~~-~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~-- 344 (480)
.. + .|+++.|+| |+++++ .+|+++.++++............... .. .......+.+.+ ..|
T Consensus 173 -~~-------~~~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~~ 241 (393)
T 1mdo_A 173 -HI-------GARGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGV-DA-WDRQSGGRAPQAEVLAPGYK 241 (393)
T ss_dssp -ET-------TSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEEC-C------------CCEESSCCCB
T ss_pred -ec-------CCCCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcc-cc-hhhhcccccccccccccCcc
Confidence 12 2 799999999 999754 56777765565544332111100000 00 000000000110 011
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----ce-eEEEEEeecCccCCCchhhHH
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-----EM-VNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-----~~-~~v~f~~~~~~~~~~~~~~~~ 418 (480)
.+...+.+.+.+.. .+++++..++..++++++.+.|.+ .+ +++...+ .. ..+++.+.+.. .+.
T Consensus 242 ~~~~~~~~a~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~------ 310 (393)
T 1mdo_A 242 YNLPDLNAAIALAQ--LQKLDALNARRAAIAAQYHQAMAD-LP-FQPLSLPSWEHIHAWHLFIIRVDEAR-CGI------ 310 (393)
T ss_dssp CCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHT-SS-CEECCCCSSCEECCCSCEEEECCHHH-HSS------
T ss_pred CCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CC-cccccCCCCCCCceeEEEEEEecccc-ccc------
Confidence 12334444443333 455778888888999999999999 65 8875433 12 23444432100 000
Q ss_pred HHhhhhhHHHHHHHHhcccEEEeeeeeC--------------Cc-------ccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 419 NILGEITPILKGRMMQAGTMMVGYQPLN--------------DL-------PNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~~~~~~--------------~~-------~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
...++.+.|.+.|+.+... ... .. ..++|++ ++..+|++||++++++|++++
T Consensus 311 -----~~~~l~~~l~~~gi~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~-~~~~~t~~~i~~~~~~l~~~~ 383 (393)
T 1mdo_A 311 -----TRDALMASLKTKGIGTGLH-FRAAHTQKYYRERFPTLTLPDTEWNSERICSLP-LFPDMTESDFDRVITALHQIA 383 (393)
T ss_dssp -----CHHHHHHHHHHTTBCCBCC-CCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEEC-CCTTCCHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHhCCCCcccc-cCccccChhhhccCCccCChhHHHHHhCEEEec-CCCCCCHHHHHHHHHHHHHHH
Confidence 0245777888888543221 100 00 2379999 888899999999999999887
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
+.
T Consensus 384 ~~ 385 (393)
T 1mdo_A 384 GQ 385 (393)
T ss_dssp C-
T ss_pred hc
Confidence 53
No 126
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.92 E-value=4.5e-24 Score=208.36 Aligned_cols=334 Identities=12% Similarity=0.028 Sum_probs=207.8
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcC-C---c---chhcChhhHHHHHHHHHHHHHHhCCCCC-C-eEECCChhHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTN-M---F---TYEIAPVFILMETVVLEKMRQIIGWQGG-D-SILAPGGSISNLY 144 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~---~---~~~~~~~~~~~e~~~~~~la~~~g~~~~-~-~~~t~ggt~a~~~ 144 (480)
.|+.+....+.++.++. .+...+... . . ....++...++.+++++++++++|.++. + +++|+|||+|+..
T Consensus 5 ~~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~ 83 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLE-RAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM 83 (362)
T ss_dssp CEECCSSSCCCCHHHHH-HHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHH-HHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHH
Confidence 35555555555666664 444433211 0 0 0112455567778899999999999764 5 4688999999999
Q ss_pred HHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH--HHHHHHcCCCCCCeEEeeCCC--CC--CCCHHHHHHHHHHH
Q psy12303 145 AFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV--RSCAAVCGLGTDNCVEVPSDK--RG--RLIPSELERLVLER 218 (480)
Q Consensus 145 al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~--~~~~~~~g~~~~~v~~v~~~~--~~--~~d~~~L~~~i~~~ 218 (480)
++.++.+ ||+ .|++....|++. ...++..| +++.++.+. ++ .+|.++++ +++
T Consensus 84 ~~~~l~~--------------~gd-~vl~~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~- 141 (362)
T 2c0r_A 84 IPMNFLK--------------EGQ-TANYVMTGSWASKALKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD- 141 (362)
T ss_dssp HHHHHCC--------------TTC-EEEEEECSHHHHHHHHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT-
T ss_pred HHHhcCC--------------CCC-eEEEEecCcHhHHHHHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC-
Confidence 9887643 556 555554555553 34555555 456777652 22 35666553 433
Q ss_pred HHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCC
Q psy12303 219 KAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT 297 (480)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~ 297 (480)
+|++|++++++|+||.+ .|+++| +|+++|+|++|+.+..+.+. ...|+++.++||+++
T Consensus 142 -----~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~---------~~~d~~~~s~~K~~g- 200 (362)
T 2c0r_A 142 -----NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDL---------NQFGLVYAGAQKNLG- 200 (362)
T ss_dssp -----TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCG---------GGCSEEEEETTTTTC-
T ss_pred -----CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccch---------hHCcEEEEecccccc-
Confidence 38999999999999995 888887 89999999999987654321 134899999999997
Q ss_pred cccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHH
Q psy12303 298 LLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELA 375 (480)
Q Consensus 298 p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~ 375 (480)
|.|+|++++++. .+.......+ ++....... ..+ ....+-. ....++..+++.+... +++++.++..+++
T Consensus 201 ~~G~G~l~~~~~-~~~~l~~~~~-~~~~~~~~~----~~~--~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 272 (362)
T 2c0r_A 201 PSGVTVVIVRED-LVAESPKHLP-TMLRYDTYV----KNN--SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKA 272 (362)
T ss_dssp CSSCEEEEEEGG-GSSSCCTTSC-GGGCHHHHH----HTT--TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CcCcEEEEEcHH-HHhhccccCc-hHHhHHHHh----hcc--CcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 778999998654 3322221111 111000000 000 0001111 1233444555544343 6889999999999
Q ss_pred HHHHHHHhcCCCCe-EEecCC---ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccE
Q psy12303 376 EYMVKKIKSMPDKF-YLILEP---EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNF 451 (480)
Q Consensus 376 ~~l~~~l~~~~~g~-~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~ 451 (480)
+++.+.|++ .+++ ++..++ ...+++|.+ +.. .. ..++.+.|.+.|++ +.++ ... .++
T Consensus 273 ~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~--~~~~~~~L~~~gi~-~~~g-~~~-~~~ 333 (362)
T 2c0r_A 273 SLIYDAIDQ-SGGFYRGCVDVDSRSDMNITFRL-ASE------------EL--EKEFVKASEQEGFV-GLKG-HRS-VGG 333 (362)
T ss_dssp HHHHHHHHT-STTSSEESSCGGGBCSSEEEEEC-SCH------------HH--HHHHHHHHHHTTEE-SCBC-CTT-TCS
T ss_pred HHHHHHHHH-cCCccccCCChHHcCCcEEEEEc-CCc------------ch--HHHHHHHHHHCCCe-eccC-CCC-CCE
Confidence 999999999 6546 775432 234455532 211 00 24566778788853 3321 111 357
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 452 FRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 452 ~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+|+| .+..++++|++++++.|++++++
T Consensus 334 iRis-~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 334 LRAS-IYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp EEEE-CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999 67788999999999999987653
No 127
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.92 E-value=1.8e-23 Score=205.99 Aligned_cols=219 Identities=14% Similarity=0.068 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~ 187 (480)
....++++.+++++|.+ .+++++|||+|+..++.++.. +|+ .|+++...|.+....+ ..
T Consensus 66 ~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~--------------~gd-~Vi~~~~~y~~~~~~~~~~~~~ 128 (392)
T 3qhx_A 66 PTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLR--------------PGD-HVVIPDDAYGGTFRLIDKVFTG 128 (392)
T ss_dssp HHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCcchHHHHHHHHHHh
Confidence 33455677799999987 489999999999999987743 445 7888889998877766 34
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.|. ++++++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.
T Consensus 129 ~g~---~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~ 194 (392)
T 3qhx_A 129 WNV---EYTPVALA-----DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPA 194 (392)
T ss_dssp GTC---EEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT
T ss_pred cCc---EEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccc
Confidence 455 78888876 899999999765 9999999999999999999999999999999999999998664
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
.. ..... ++|+++.|+||+++++. ..|+++.+++.+.......... .+.
T Consensus 195 ~~-~~~~~-------~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~---------------------~g~ 245 (392)
T 3qhx_A 195 LQ-QPLSL-------GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNG---------------------AGA 245 (392)
T ss_dssp TC-CGGGG-------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH---------------------HCC
T ss_pred cC-ChHHh-------CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHh---------------------cCC
Confidence 32 22233 78999999999999764 3788777665554432211000 111
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
....+.+|+.++. .+.+..+.++..++++++.+.|++ .|.+..+.
T Consensus 246 ~~~~~~~~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~-~~~v~~v~ 290 (392)
T 3qhx_A 246 VPGPFDAYLTMRG--LKTLVLRMQRHSENAAAVAEFLAE-HPAISTVL 290 (392)
T ss_dssp CCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHT-CTTEEEEE
T ss_pred CCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhc-CCCcceEE
Confidence 2345566666654 344667778888999999999999 88886553
No 128
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=6e-23 Score=202.72 Aligned_cols=317 Identities=13% Similarity=0.033 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
..++++.+++++|.+ ++++++|||+|+..++.++.-. ||+ .|+++..+|+++..++...|.
T Consensus 34 ~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~l~~~-------------~gd-~Vl~~~~~~~~~~~~~~~~g~--- 94 (394)
T 1o69_A 34 VNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVK-------------QDD-IVLASSFTFIASVAPICYLKA--- 94 (394)
T ss_dssp HHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCC-------------TTC-EEEEESSSCGGGTHHHHHTTC---
T ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC-------------CCC-EEEECCCccHHHHHHHHHcCC---
Confidence 345566788888874 5999999999999999876211 445 788999999999999999887
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
+++.+|+++++.+|+++|++++++. +.++++|++++ ++|...++++|.++|+++|+++|+|++|+.+..+.+..
T Consensus 95 ~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~ 168 (394)
T 1o69_A 95 KPVFIDCDETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKA 168 (394)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE
T ss_pred EEEEEEeCCCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcc
Confidence 8889999888899999999999762 11277888875 78999999999999999999999999999544432221
Q ss_pred cCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC--CchH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN--DIFK 351 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~--~~l~ 351 (480)
...+..+|+++++.||.++ |.++|+++++++.+..........+..... .+.. ...+.++ ..+.
T Consensus 169 ----~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~-----~~~~----~~~g~~~~~~~~~ 234 (394)
T 1o69_A 169 ----LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENCL-----HYEH----LDYGYNYRLSNVL 234 (394)
T ss_dssp ----TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSSS-----SCCC----SSCCCBCBCCHHH
T ss_pred ----cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccCc-----cccc----cccCcccCcCHHH
Confidence 1112258899999999887 578899998766655443321111110000 0000 0112222 2233
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc---ee--EEEEEeecCc----cCCCc-----hhhH
Q psy12303 352 LWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE---MV--NVSFWYLPTR----VRNMP-----HEKR 417 (480)
Q Consensus 352 ~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~---~~--~v~f~~~~~~----~~~~~-----~~~~ 417 (480)
+.+++.. .+.+++.+++..++++++.+.|++ . ++++.++. .+ ++++.+.+.. ..+.. ....
T Consensus 235 aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~-~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T 1o69_A 235 GAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGE-Y--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNIT 309 (394)
T ss_dssp HHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTT-T--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCC
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-c--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccc
Confidence 3333333 345677889999999999999998 5 77654321 12 3455442110 00000 0000
Q ss_pred HHHhhhhhHHHHHHHHhcccEEEeee-------eeCCc------------ccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 418 LNILGEITPILKGRMMQAGTMMVGYQ-------PLNDL------------PNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 418 ~~~l~~~~~~i~~~l~~~g~~~~~~~-------~~~~~------------~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
. ..+ ..++.+.|.+.|+.+.... ..... ...+|+. .++.+|++||++++++|+++.+
T Consensus 310 ~-~~~--~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 310 L-HPK--ISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLP-SGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp C-CHH--HHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHHHHC
T ss_pred c-ccC--HHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEcc-CCCCCCHHHHHHHHHHHHHHHh
Confidence 0 001 2456777878875432210 00000 1456777 6899999999999999998764
No 129
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.92 E-value=2.6e-23 Score=205.59 Aligned_cols=284 Identities=12% Similarity=0.006 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~ 187 (480)
....++++.+++++|.+ ..+++++||+|+..++.++.. +|+ .|+++...|.++...+ ..
T Consensus 65 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~--------------~gd-~vl~~~~~~~~~~~~~~~~~~~ 127 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLR--------------PGD-EVLLGNTLYGCTFAFLHHGIGE 127 (398)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEESSCCSHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhc--------------CCC-EEEEeCCCchhHHHHHHHHHHH
Confidence 44556677799999987 467778889999999988743 445 7888889999988776 34
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.|+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.
T Consensus 128 ~g~---~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~ 193 (398)
T 1gc0_A 128 FGV---KLRHVDMA-----DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPY 193 (398)
T ss_dssp GTC---EEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHH
T ss_pred cCC---EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccc
Confidence 455 77788764 899999988764 8999999999999999999999999999999999999999876
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhH-hhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLI-SCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
...+. .. ++|+++.|+||++++|.+ .|+++.++. .+. ..... ..++. +
T Consensus 194 ~~~~~-~~-------~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~-~~~~~-------------------~ 244 (398)
T 1gc0_A 194 LQRPL-EL-------GADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQG-LKDMT-------------------G 244 (398)
T ss_dssp HCCGG-GG-------TCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTH-HHHHT-------------------C
T ss_pred cCCch-hh-------CceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHH-hhccC-------------------C
Confidence 54322 23 689999999999998765 477776543 332 22110 00000 0
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe--------------cC---CceeEEEEEeecC
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI--------------LE---PEMVNVSFWYLPT 407 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~--------------~~---~~~~~v~f~~~~~ 407 (480)
.....+.+|+.++.+ +.+..+.++..++++.+.+.|++ .+++.-+ .+ ...++++|.+...
T Consensus 245 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (398)
T 1gc0_A 245 AVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLAR-QPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG 321 (398)
T ss_dssp CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHT-CTTEEEEEEC----------------CCTTEEEEEETTH
T ss_pred CCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhc-CCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC
Confidence 012344566555543 34566677778888888888888 6655422 11 1345566643210
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEee--ee----------------------eCCc-ccEEEEecccCCCC
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGY--QP----------------------LNDL-PNFFRNIISSAAVT 462 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~--~~----------------------~~~~-~~~~R~~~~~~~~t 462 (480)
.....+.+.+.+...... +. ..+. .+++|+| ++..++
T Consensus 322 -----------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis-~g~~~~ 383 (398)
T 1gc0_A 322 -----------------IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLS-VGLEDI 383 (398)
T ss_dssp -----------------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEE-CCSSCH
T ss_pred -----------------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEE-eCcCCH
Confidence 012233333344322210 00 0011 3799999 778899
Q ss_pred HHHHHHHHHHHHHh
Q psy12303 463 EGDIDFLLTEMDRL 476 (480)
Q Consensus 463 ~~di~~~~~~l~~~ 476 (480)
+++|+.+.++|+++
T Consensus 384 ~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 384 DDLLADVQQALKAS 397 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 130
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.92 E-value=7.5e-25 Score=219.34 Aligned_cols=288 Identities=13% Similarity=0.052 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++++++ +|.+ ..+++|+|+|+||..++.++.. ||+ .|+++..+|.++..++...|.
T Consensus 57 ~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~--------------~gd-~Vlv~~~~h~s~~~~~~~~G~- 118 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQ--------------KKG-DILMARNVHKSVLHALDISQQ- 118 (446)
T ss_dssp SHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTT--------------SSS-CEEECTTCCHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEEecCccHHHHHHHHHcCC-
Confidence 345677888999 9987 4689999999999999987743 445 788999999999999999988
Q ss_pred CCCeEEeeC--CCC----CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 192 TDNCVEVPS--DKR----GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 192 ~~~v~~v~~--~~~----~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
++++++. +++ +.+|+++| +.++ +++|++++ +|++|.+.|+++|.++|++||+|+|+|+||++
T Consensus 119 --~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~ 186 (446)
T 2x3l_A 119 --EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA 186 (446)
T ss_dssp --CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT
T ss_pred --eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh
Confidence 7888887 655 56888877 3333 78999999 46699999999999999999999999999998
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhh-HhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLL-ISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
...+.+. .. ..... ++|+++.|+||+++++.++|++++++.... ..... ...... . .+
T Consensus 187 ~~~f~~~-~~-~~~~~-g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~--~~~~~~----------~------~s 245 (446)
T 2x3l_A 187 HFGLQGF-PD-STLNY-QADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIE--YLSYFQ----------T------SS 245 (446)
T ss_dssp TTTSTTS-CC-CGGGG-TCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHH--HHHHHS----------C------SS
T ss_pred hhccCCC-CC-ChHHc-CCCEEEECCccccccccccEEEEEcCCcCCHHHHHH--HHHHHc----------C------CC
Confidence 3222221 11 11111 579999999999988889999998765321 11100 000000 0 00
Q ss_pred CCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhh
Q psy12303 345 RHN-DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGE 423 (480)
Q Consensus 345 r~~-~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~ 423 (480)
... ...++..+++.+...+.+++.++..++++++++. +++++.+.....+.+.. + ...
T Consensus 246 ~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~------g~~~~~~~~~~~l~i~~-~-~~~------------- 304 (446)
T 2x3l_A 246 PSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK------GFEMLQVDDPLKLLIKY-E-GFT------------- 304 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH------TCEEEECSSTTEEEEEC-T-TSC-------------
T ss_pred chHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc------CCEECcCCCCeEEEEEe-C-CcC-------------
Confidence 001 1122333344333333333566777777776665 56665433222344432 1 111
Q ss_pred hhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 424 ITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 424 ~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.++|+ .+... + .+++|++ ++..+|++++ +++++|+++.++
T Consensus 305 -~~~l~~~L~~~GI-~v~~~---g-~~~iRi~-~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 305 -GHDIQNWFMNAHI-YLELA---D-DYQALAI-LPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp -HHHHHHHHHHTTE-EESEE---C-SSCEEEE-CCCCCTTCCC-CHHHHHHHHHTC
T ss_pred -HHHHHHHHHHCCC-EEEec---C-CCEEEEE-eecCCCHHHH-HHHHHHHHHHHh
Confidence 2356778878874 44321 3 4689999 7788899999 999999988654
No 131
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.92 E-value=2e-23 Score=206.37 Aligned_cols=287 Identities=14% Similarity=0.067 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----H
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----A 186 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~ 186 (480)
.....++++++++++|.+ +.+++++||+|+..++.++.. ||+ .|+++...|+++...+ .
T Consensus 63 ~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~--------------~gd-~vi~~~~~~~~~~~~~~~~~~ 125 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLCQ--------------QGD-HIVSASAIYGCTHAFLSHSMP 125 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEESSSCHHHHHHHHTHHH
T ss_pred ChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCcccHHHHHHHHHH
Confidence 455667888899999987 477888899999999988743 445 7888899999988876 6
Q ss_pred HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 187 VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
..|. +++.+|.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+
T Consensus 126 ~~g~---~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 191 (398)
T 2rfv_A 126 KFGI---NVRFVDAA-----KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSP 191 (398)
T ss_dssp HTTC---EEEEECTT-----SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred HcCC---EEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 6676 78888875 899999988754 899999999999999999999999999999999999999977
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhH-hhhcCCcccccccccccCcccCCCCccccC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLI-SCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
....+ ... ++|+++.|+||++++|.. +|+++.++ +.+. .... +.... -
T Consensus 192 ~~~~~-~~~-------~~di~~~s~sK~~~~~g~~~~G~~~~~~-~~~~~~~~~----~~~~~----------------~ 242 (398)
T 2rfv_A 192 YCQQP-LQL-------GADIVVHSVTKYINGHGDVIGGIIVGKQ-EFIDQARFV----GLKDI----------------T 242 (398)
T ss_dssp TTCCG-GGG-------TCSEEEEETTTTTTCSSCCCCEEEEECH-HHHHHHHHT----HHHHT----------------T
T ss_pred ccCCc-hhh-------CCcEEEEeCcccccCCCCceEEEEEECH-HHHHHHHHH----HHHhC----------------C
Confidence 65322 122 689999999999988765 48877654 3333 2211 11000 0
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe--------------cC---CceeEEEEEeec
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI--------------LE---PEMVNVSFWYLP 406 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~--------------~~---~~~~~v~f~~~~ 406 (480)
+.....+..++.+..+ +.+....++..++++.+.+.|++ .+.+.-+ .+ ...++++|.+..
T Consensus 243 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 243 GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEG-HPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 0012344555555544 22344556666777778888877 5443322 11 135666664321
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee----------------------eCCc-ccEEEEecccCCCCH
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP----------------------LNDL-PNFFRNIISSAAVTE 463 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~----------------------~~~~-~~~~R~~~~~~~~t~ 463 (480)
.. +. ...+.+.+...| +.++.+. ..+. .+++|++ ++..+++
T Consensus 320 ~~-------~~-------~~~l~~~~~~~~-i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls-~~~~~~~ 383 (398)
T 2rfv_A 320 GL-------EA-------GRRMINSVELCL-LAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLS-VGLEDPE 383 (398)
T ss_dssp HH-------HH-------HHHHHTTCSSSE-ECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEE-CCSSCHH
T ss_pred CH-------HH-------HHHHHHhCCcce-eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEE-ecCCCHH
Confidence 00 00 112333332222 2111110 0111 4799999 7789999
Q ss_pred HHHHHHHHHHHHh
Q psy12303 464 GDIDFLLTEMDRL 476 (480)
Q Consensus 464 ~di~~~~~~l~~~ 476 (480)
++|+.++++|+++
T Consensus 384 ~~i~~l~~al~~~ 396 (398)
T 2rfv_A 384 DIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
No 132
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=6.9e-23 Score=201.75 Aligned_cols=284 Identities=14% Similarity=0.095 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~g 189 (480)
..++++.+++++|.+ . .+++++||+|+..++.++.. +|+ .|+++..+|.++.... ...|
T Consensus 54 ~~~l~~~la~~~~~~-~-~i~~~sGt~a~~~~~~~~~~--------------~g~-~vl~~~~~~~~~~~~~~~~~~~~g 116 (386)
T 1cs1_A 54 RDVVQRALAELEGGA-G-AVLTNTGMSAIHLVTTVFLK--------------PGD-LLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_dssp HHHHHHHHHHHHTCS-E-EEEESSHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEecCCcHhHHHHHHHHHHhcC
Confidence 445667788888887 3 45556669999999987743 445 7888888998866554 3344
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
. +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+...
T Consensus 117 ~---~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~ 182 (386)
T 1cs1_A 117 Y---RVLFVDQG-----DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ 182 (386)
T ss_dssp C---EEEEECTT-----CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC
T ss_pred C---EEEEeCCC-----CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 4 77888765 899999999754 889999999999999999999999999999999999999988654
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcccc--eEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLLQC--STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
.+. .. ++|+++.|+||++++|.+. |+++++++++..........+ +...
T Consensus 183 ~~~-~~-------~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~---------------------~~~~ 233 (386)
T 1cs1_A 183 NPL-AL-------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI---------------------GVTG 233 (386)
T ss_dssp CGG-GG-------TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH---------------------TCBC
T ss_pred Ccc-cc-------CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhc---------------------CCCC
Confidence 322 23 7899999999999988763 888877644444332111000 0002
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----------------ceeEEEEEeecCccC
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-----------------EMVNVSFWYLPTRVR 410 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-----------------~~~~v~f~~~~~~~~ 410 (480)
..+..++.+.. .+.+....++..++++++.+.|++ ++.+.-+..+ ..++++|.+.. .
T Consensus 234 ~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 307 (386)
T 1cs1_A 234 GAFDSYLLLRG--LRTLVPRMELAQRNAQAIVKYLQT-QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-D-- 307 (386)
T ss_dssp CHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-C--
T ss_pred CHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-C--
Confidence 23344444433 234556667778888899999988 7776543211 25566665321 0
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEe--ee------------e----------eCCc-ccEEEEecccCCCCHHH
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVG--YQ------------P----------LNDL-PNFFRNIISSAAVTEGD 465 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~--~~------------~----------~~~~-~~~~R~~~~~~~~t~~d 465 (480)
...+.+.|.+.|++... .+ . ..+. .+++|++ ++..+++++
T Consensus 308 --------------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis-~~~~~~~~~ 372 (386)
T 1cs1_A 308 --------------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRIS-TGIEDGEDL 372 (386)
T ss_dssp --------------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEE-CCSSCHHHH
T ss_pred --------------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEE-EccCCHHHH
Confidence 12345666677754321 11 0 0011 4799999 677899999
Q ss_pred HHHHHHHHHHhhc
Q psy12303 466 IDFLLTEMDRLGH 478 (480)
Q Consensus 466 i~~~~~~l~~~~~ 478 (480)
|+.+.++|+++.+
T Consensus 373 i~~l~~al~~~~~ 385 (386)
T 1cs1_A 373 IADLENGFRAANK 385 (386)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999988754
No 133
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.92 E-value=1.5e-23 Score=208.79 Aligned_cols=343 Identities=8% Similarity=-0.053 Sum_probs=216.2
Q ss_pred CCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHH
Q psy12303 70 TGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 70 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~ 148 (480)
.....|.+.-.....++.+ .+.+..........|....+..++.+++.+++....+.+ +.++++|+|||+|+..++.+
T Consensus 43 l~~g~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~ 121 (418)
T 3rq1_A 43 GTLGAIHDEEGNLVFLKTV-KEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHN 121 (418)
T ss_dssp CCSSCCBCTTSCBCCCHHH-HHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCccccHHH-HHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHH
Confidence 3334443332233333433 344544333223345445556788888778776666543 12699999999999999987
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccE-
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPF- 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~- 226 (480)
..+ ||+ .|+++.++|.++...+...|. +++.+|.+ +++.+|+++|++++++.... +++
T Consensus 122 l~~--------------~gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~~~~~--~~~~ 181 (418)
T 3rq1_A 122 YTE--------------PGD-EVLTADWYWGAYRVICSDTGR---TLVTYSLFDEHNNFNHEAFQNRVNELAAK--QTNV 181 (418)
T ss_dssp HSC--------------TTC-EEEEESSCCTHHHHHHHHTTC---EEEEECSBCTTSSBCHHHHHHHHHHHHHH--CSEE
T ss_pred hcC--------------CCC-EEEECCCCchhHHHHHHHcCC---EEEEEeeeCCCCCcCHHHHHHHHHHhhcc--CCCE
Confidence 754 556 788888999999999999998 88899984 45789999999999863211 144
Q ss_pred EEEeccC-CCccccccChHHHH---HHHH------HcCcEEEeeccccccccccccccC--cccCCCCCCc---cceeCc
Q psy12303 227 FVNCTSG-TTVLGAFDPIEEIA---DICQ------KYNMWLHVDAAWGGGLLLSKKYRH--PRLTGIERAD---SVTWNP 291 (480)
Q Consensus 227 ~v~~~~~-~~~~G~~~~l~~I~---~i~~------~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~D---~~~~s~ 291 (480)
+|+++++ +||||.+.|.+++. ++|+ +||+++++|++|.++......... ....++ ..| +++.|+
T Consensus 182 ~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~ 260 (418)
T 3rq1_A 182 VVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSL 260 (418)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEES
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeC
Confidence 8888889 99999998865555 5555 899999999999776542211100 012222 123 566799
Q ss_pred cccCCC-cccceEEEE--eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH-------
Q psy12303 292 HKLMGT-LLQCSTIHF--KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD------- 361 (480)
Q Consensus 292 hK~~~~-p~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~------- 361 (480)
+|.++. +.++|+++. +++++........ .+..... + .....+...+....+..
T Consensus 261 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~-----~~~~~~~~~a~~~~l~~~~~~~~~ 323 (418)
T 3rq1_A 261 SKGFTMYGQRVGAMIGISDDEEIADEFFEVN-KSTSRAT-----------W-----SNICRPAMRTMANIVADPAKFKEY 323 (418)
T ss_dssp TTTTTCCSSCCEEEEEEESSHHHHHHHHHHH-HHHHHHH-----------T-----SSCCHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCcCcCCcceEEEEEeCCHHHHHHHHHHH-HHHHhhc-----------c-----CCCchHHHHHHHHHhCCHHHHHHH
Confidence 999874 467888876 2555544332110 0000000 0 00123333333333321
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEE
Q psy12303 362 -EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMV 440 (480)
Q Consensus 362 -~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~ 440 (480)
+...++.++..++++++.+.|++ + |+++. +|..+.++|...+ . ..++.+.|.+.|+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~~~-~----------------~~~~~~~l~~~gi~v- 382 (418)
T 3rq1_A 324 EAERNCYYQLIRDRADIFKQEAAQ-V-GLPML-PYRGGFFITIPTD-S----------------ANAICEELKKEHIYV- 382 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-H-TCCCC-CCCSSSEEEEECT-T----------------HHHHHHHHHHTTEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-c-CCCCC-CCCceEEEEcCCC-C----------------HHHHHHHHHhCCEEE-
Confidence 22335567778888999999998 5 88764 5666655553211 0 235667777888544
Q ss_pred eeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 441 GYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 441 ~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+ + .+++|+++ . ..++++|++++++|++++++
T Consensus 383 ~~----g-~~~iRis~-~-~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 383 IA----L-ANGIRIAA-C-GIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp EE----C-SSEEEEEG-G-GSCHHHHTTHHHHHHHHHHH
T ss_pred ec----C-CCCeEEEE-e-cCCHHHHHHHHHHHHHHHHH
Confidence 33 2 46899994 3 46899999999999998765
No 134
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.91 E-value=5.9e-24 Score=211.73 Aligned_cols=306 Identities=15% Similarity=0.110 Sum_probs=193.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH---HHH
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS---CAA 186 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~---~~~ 186 (480)
...+++.+++++++++|.++..+++ ++||+|+..++.++.. ||+ .|+++..+|.++.. ...
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~~v~~-~sGs~a~~~a~~~~~~--------------~gd-~v~~~~~~~~~~~~~~~~~~ 137 (420)
T 3gbx_A 74 VDVVEQLAIDRAKELFGADYANVQP-HSGSQANFAVYTALLQ--------------PGD-TVLGMNLAQGGHLTHGSPVN 137 (420)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEECCC-SSHHHHHHHHHHHHCC--------------TTC-EEEEEEEC------------
T ss_pred HHHHHHHHHHHHHHHhCCCCceeEe-cCcHHHHHHHHHHhcC--------------CCC-EEEecchhhcceeccchhhh
Confidence 3566777789999999997654444 5568999999887743 556 78888888887442 222
Q ss_pred HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 187 VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
..|.+. ..+.++.+.++.+|+++|++++++. ++++|+++++++ |...|+++|.++|++||+++|+|++|+.+
T Consensus 138 ~~g~~~-~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~ 209 (420)
T 3gbx_A 138 FSGKLY-NIVPYGIDESGKIDYDEMAKLAKEH-----KPKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAG 209 (420)
T ss_dssp CHHHHS-EEEEEEECTTCSCCHHHHHHHHHHH-----CCSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHH
T ss_pred hcccce-eEEeccCCccCCcCHHHHHHHHHhc-----CCeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchh
Confidence 223221 4455677778899999999999874 278888887765 46889999999999999999999998766
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeC--chhhHhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQ--DGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
......... . ...+|+++.|+||++++|.+ |+++.++ ..+.........++.. .+
T Consensus 210 ~~~~~~~~~-~---~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~~~~~~~------------------~~ 266 (420)
T 3gbx_A 210 LIAAGVYPN-P---VPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSAVFPSAQ------------------GG 266 (420)
T ss_dssp HHHTTSSCC-S---TTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHHHC----------------------CC
T ss_pred ceecccCCc-c---cccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhhcCCCCC------------------CC
Confidence 553322111 1 22589999999999986664 7777655 1333332211000000 00
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-CceeEEEEEeecCccCCCchhhHHHHhh
Q psy12303 345 RH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PEMVNVSFWYLPTRVRNMPHEKRLNILG 422 (480)
Q Consensus 345 r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 422 (480)
.. ....++..++.....++++++.++..++++++.+.|.+ .|++++.+ .....+.+.+.+....
T Consensus 267 ~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~------------ 332 (420)
T 3gbx_A 267 PLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN--RGYKVVSGGTENHLFLLDLVDKNLT------------ 332 (420)
T ss_dssp CCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCSSSEEEEECGGGTCC------------
T ss_pred cchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh--cCCeeccCCCCCeEEEEEcCCCCCC------------
Confidence 00 12223344444444567788899999999999999998 78998653 2333444433221111
Q ss_pred hhhHHHHHHHHhcccEEEee------eeeCCcccEEEEeccc---CCCCHHHHHHHHHHHHHhhcc
Q psy12303 423 EITPILKGRMMQAGTMMVGY------QPLNDLPNFFRNIISS---AAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 423 ~~~~~i~~~l~~~g~~~~~~------~~~~~~~~~~R~~~~~---~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+.+.|.+.|+.+... ....+ ...+|+++.. ...++++|+++++.|++++++
T Consensus 333 --~~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 333 --GKEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp --HHHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 234566777778554431 11122 3569999432 225689999999999987653
No 135
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.91 E-value=1.8e-23 Score=207.62 Aligned_cols=335 Identities=13% Similarity=0.026 Sum_probs=213.5
Q ss_pred HHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCcc
Q psy12303 90 GEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAI 165 (480)
Q Consensus 90 ~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 165 (480)
.+.+...+.. ....|....+..++++.+.+++.+.+|. ++ .++++|+|||+|+..++.++..
T Consensus 42 ~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~-------------- 107 (410)
T 3e2y_A 42 KEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVD-------------- 107 (410)
T ss_dssp HHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC--------------
Confidence 3445544432 2234444445678888888999888886 34 6899999999999999988743
Q ss_pred CCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC-----------CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 166 KGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD-----------KRGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 166 ~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~-----------~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
||+ .|+++.+.|.++...+...|. +++.+|.+ .++.+|+++|+++++++ +++|++++++
T Consensus 108 ~gd-~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~ 177 (410)
T 3e2y_A 108 PGD-EVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPH 177 (410)
T ss_dssp TTC-EEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEESSC
T ss_pred CCC-EEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEeCCC
Confidence 445 788888899999999999988 77888876 34678999999988654 8999999999
Q ss_pred Cccccc---cChHHHHHHHHHcCcEEEeeccccccccccccccC-cccCCCCCCccceeCccccCC-CcccceEEEEeCc
Q psy12303 235 TVLGAF---DPIEEIADICQKYNMWLHVDAAWGGGLLLSKKYRH-PRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQD 309 (480)
Q Consensus 235 ~~~G~~---~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~ 309 (480)
|++|.+ .++++|.++|++||+++|+|++|+.+......... ..+....+.++++.|++|.++ .+.++|+++.++
T Consensus 178 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~- 256 (410)
T 3e2y_A 178 NPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA- 256 (410)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH-
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH-
Confidence 999999 56999999999999999999999876543221100 011111134577779999998 446789887643
Q ss_pred hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHH------hcHHHHHHHHHHHHHHHHHHHHHHh
Q psy12303 310 GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRA------KGDEGFEKQIDRLMELAEYMVKKIK 383 (480)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~------~g~~~~~~~~~~~~~l~~~l~~~l~ 383 (480)
..+........... + ........++...+.. ...+.++++.++..++++++.+.|+
T Consensus 257 ~~~~~~~~~~~~~~---------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 318 (410)
T 3e2y_A 257 HLIKHLQTVQQNSF---------------Y---TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318 (410)
T ss_dssp HHHHHHHHHHHTTT---------------C---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc---------------c---CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433221100000 0 0000112222223321 1245677888899999999999999
Q ss_pred cCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC------cccEEEEec
Q psy12303 384 SMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND------LPNFFRNII 456 (480)
Q Consensus 384 ~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~------~~~~~R~~~ 456 (480)
+ . |+++. .|..+.+.+...+....+.+.... ... ...++..++. +.|+.+.....+.. ..+++|+++
T Consensus 319 ~-~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~ 392 (410)
T 3e2y_A 319 S-V-GLKPI-VPDGGYFIIADVSSLGADLSDMNS-DEP--YDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF 392 (410)
T ss_dssp T-T-TCEEE-BCSBSSEEEEECGGGCCCCTTCCS-SCC--HHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEEC
T ss_pred H-C-CCeec-CCCccEEEEEEchhhhcccccccc-ccc--CHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEE
Confidence 9 5 88875 455555544322211111100000 000 0124445444 45644433222211 147999994
Q ss_pred ccCCCCHHHHHHHHHHHHHh
Q psy12303 457 SSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 457 ~~~~~t~~di~~~~~~l~~~ 476 (480)
. .++++|++++++|+++
T Consensus 393 ~---~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 393 I---KKDSTLDAAEEIFRAW 409 (410)
T ss_dssp C---CCHHHHHHHHHHHHTC
T ss_pred c---CCHHHHHHHHHHHHhc
Confidence 3 3999999999999864
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.91 E-value=1.8e-22 Score=201.24 Aligned_cols=301 Identities=12% Similarity=0.077 Sum_probs=201.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ ++++|+|||+|+..++.++. +|+ .|+++..+|+++..++...|. +
T Consensus 55 ~~l~~~la~~~~~~--~v~~~~ggt~al~~~l~~l~---------------~gd-~Vlv~~~~~~~~~~~~~~~G~---~ 113 (424)
T 2po3_A 55 REFEERVAGLAGVR--HAVATCNATAGLQLLAHAAG---------------LTG-EVIMPSMTFAATPHALRWIGL---T 113 (424)
T ss_dssp HHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHHT---------------CCS-EEEEESSSCTHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC---------------CCC-EEEECCCccHHHHHHHHHcCC---E
Confidence 34566688888875 59999999999999998773 234 788999999999999999988 8
Q ss_pred eEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+++++ ++.+|+++|+++++++ +++|++++ ++|.+.++++|.++|+++|+++|+|++|+.+......
T Consensus 114 ~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~- 183 (424)
T 2po3_A 114 PVFADIDPDTGNLDPDQVAAAVTPR------TSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR- 183 (424)
T ss_dssp EEEECBCTTTSSBCHHHHGGGCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-
T ss_pred EEEEecCCCcCCcCHHHHHHhhCcC------CcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe-
Confidence 88999886 6789999999988653 88888754 7999999999999999999999999999954432111
Q ss_pred cCcccCCCCCCccceeCcc--ccCCCcccceEEEEeCchhhHhhhcCCc-ccccccccccCcccCCCCccccCCCCCCch
Q psy12303 274 RHPRLTGIERADSVTWNPH--KLMGTLLQCSTIHFKQDGLLISCNQMSA-EYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~h--K~~~~p~~~g~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
. +.. ..|+++.|+| |++++ ..+|+++.+++++......... .+.. .+... ......++..+
T Consensus 184 ~---~~~--~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~~~~~--------~~~~~--~~g~~~~~~~~ 247 (424)
T 2po3_A 184 P---AGS--LGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRALHNFGFDL--------PGGSP--AGGTNAKMSEA 247 (424)
T ss_dssp E---TTS--SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTTTC--------TTCCT--TCCCBCCCCHH
T ss_pred e---ccc--ccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhcCccc--------ccccc--ccCcCCCcCHH
Confidence 1 111 2477777776 98875 5677777664555443321110 0000 00000 01112234455
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce-----eEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 351 KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM-----VNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 351 ~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~-----~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
.++.++.. .+++++..++..++++++.+.|.+ +++++++.++.. ..+.+.+ +....+. + .
T Consensus 248 ~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~i~~-~~~~~~~---------~--~ 312 (424)
T 2po3_A 248 AAAMGLTS--LDAFPEVIDRNRRNHAAYREHLAD-LPGVLVADHDRHGLNNHQYVIVEI-DEATTGI---------H--R 312 (424)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCS-CTTEEECCGGGGSCCCCCCEEEEE-CHHHHSS---------C--H
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCCCCCCccccEEEEEEE-CCccchh---------h--H
Confidence 55555543 466788889999999999999999 889998653432 2233332 1100000 0 2
Q ss_pred HHHHHHHHhcccEEEeeee-e-C------C-----cc-------cEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 426 PILKGRMMQAGTMMVGYQP-L-N------D-----LP-------NFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~-~-~------~-----~~-------~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.++.+.|.+.|+.+..... . . + .+ ..+|++ ++..+|++||++++++|+++++
T Consensus 313 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~-~~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 313 DLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLP-TGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp HHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEEC-CSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEee-CCCCCCHHHHHHHHHHHHHHHh
Confidence 3566777788854322100 0 0 0 01 127777 7889999999999999988764
No 137
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.91 E-value=3.2e-23 Score=207.19 Aligned_cols=314 Identities=11% Similarity=0.005 Sum_probs=208.4
Q ss_pred chhcChhhHHHHHHHHHHHHHHh-CCCCCC---eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc
Q psy12303 103 TYEIAPVFILMETVVLEKMRQII-GWQGGD---SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH 178 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~-g~~~~~---~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h 178 (480)
.|....+..++++.+.+++.+.. +.++++ +++|+|||+|+..++.++.+ ||+ .|+++.++|
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------------~gd-~Vl~~~p~y 147 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVN--------------QDD-TILLPEHNW 147 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCC--------------TTC-EEEEESSCC
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhC--------------CCC-EEEEcCCcC
Confidence 34333345666666666655442 666667 99999999999999988753 455 788888999
Q ss_pred hhHHHHHHH-cCCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH-
Q psy12303 179 YSVRSCAAV-CGLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK- 252 (480)
Q Consensus 179 ~s~~~~~~~-~g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~- 252 (480)
+++...+.. .|. +++.+|.++ ++.+|+++|++++++. +.++++|++++++||||.+.| +++|.++|++
T Consensus 148 ~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 221 (430)
T 2x5f_A 148 GNYKLVFNTRNGA---NLQTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKAL 221 (430)
T ss_dssp THHHHHHTTTTCC---EEEEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhcCC---eEEEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence 999998888 887 788888875 4689999999999762 223889999999999999988 8999999999
Q ss_pred ----cCcEEEeeccccccccccccccC-c-ccCCCCCC---ccceeCccccCCCc-ccceEEEE--eCchhhHhhhcCCc
Q psy12303 253 ----YNMWLHVDAAWGGGLLLSKKYRH-P-RLTGIERA---DSVTWNPHKLMGTL-LQCSTIHF--KQDGLLISCNQMSA 320 (480)
Q Consensus 253 ----~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~~~~~---D~~~~s~hK~~~~p-~~~g~~~~--~~~~~~~~~~~~~~ 320 (480)
||+++++|++|+.+......... - .+.+.... ++++.++||+++.| .++|++++ +++...........
T Consensus 222 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~ 301 (430)
T 2x5f_A 222 ANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVK 301 (430)
T ss_dssp HHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHH
T ss_pred hhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHh
Confidence 99999999999986543211100 0 01122234 57788999999744 56799987 24444443321110
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEE
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-----DEGFEKQIDRLMELAEYMVKKIK----SMPDKFYL 391 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-----~~~~~~~~~~~~~l~~~l~~~l~----~~~~g~~~ 391 (480)
...... ......+..+++...+. .+.+++..++..++++++.+.|+ + .++++
T Consensus 302 ~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~g~~~ 362 (430)
T 2x5f_A 302 GLIRSN-----------------ISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYH--SHWQA 362 (430)
T ss_dssp HHHHTT-----------------TSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGT--TTEEE
T ss_pred hhhhcc-----------------cCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--CCcee
Confidence 000000 00012233333333322 22234477888889999999998 5 37887
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh-cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ-AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
. ++..+.+++...+ ... ..++.+.|.+ .|+. +.++ + .+++|+++ +. +++++|++++
T Consensus 363 ~-~~~~g~~~~~~~~-~~~--------------~~~~~~~l~~~~gi~-v~~g---~-~~~iRis~-~~-~~~e~i~~~~ 419 (430)
T 2x5f_A 363 Y-DFNSGYFMAIKVH-DVD--------------PEALRKHLIDKYSIG-VIAL---N-ATDIRIAF-SC-VEKDDIPHVF 419 (430)
T ss_dssp C-CCCBSSEEEEEES-SSC--------------HHHHHHHHHHHHCEE-CEEC---S-SSEEEEEG-GG-SCGGGHHHHH
T ss_pred e-CCCceEEEEeCCC-CCC--------------HHHHHHHHHHhCCEE-EecC---C-CCeEEEEE-ec-CCHHHHHHHH
Confidence 5 5555554443333 211 2356777877 7744 4432 3 57999994 43 5899999999
Q ss_pred HHHHHhhcc
Q psy12303 471 TEMDRLGHD 479 (480)
Q Consensus 471 ~~l~~~~~~ 479 (480)
++|++++++
T Consensus 420 ~~l~~~l~~ 428 (430)
T 2x5f_A 420 DSIAKAIDD 428 (430)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988764
No 138
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=1.1e-23 Score=222.26 Aligned_cols=315 Identities=18% Similarity=0.169 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
-.+.++.+++++|.+. .+++++|+|+||..++.+... ||+ .|+++..+|+|+..++...|+
T Consensus 207 v~~~ee~la~l~G~d~-~i~~~~Gtt~a~~~~i~al~~--------------~GD-~Vlv~~~~h~s~~~~~~~~G~--- 267 (755)
T 2vyc_A 207 FGESEKYAARVFGADR-SWSVVVGTSGSNRTIMQACMT--------------DND-VVVVDRNCHKSIEQGLMLTGA--- 267 (755)
T ss_dssp HHHHHHHHHHHHTCSE-EEEESSHHHHHHHHHHHHHCC--------------TTC-EEEEESSCCHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHhCCCc-eEEECCcHHHHHHHHHHHhcC--------------CCC-EEEECCCchHHHHHHHHHcCC---
Confidence 3456788999999974 467788888999999888754 556 889999999999999999888
Q ss_pred CeEEeeCCCC-----CCC-----CHHHHHHHHHHH----HHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 194 NCVEVPSDKR-----GRL-----IPSELERLVLER----KAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 194 ~v~~v~~~~~-----~~~-----d~~~L~~~i~~~----~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
++++++.+.+ +.+ |+++|++++++. .+++.+|++|+++++ |++|.+.|+++|+++|++||+++|+
T Consensus 268 ~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~liv 346 (755)
T 2vyc_A 268 KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHF 346 (755)
T ss_dssp EEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEE
T ss_pred EEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEE
Confidence 7888887543 346 999999999863 124556678999998 6899999999999999999999999
Q ss_pred ecccccccccccccc-CcccCCCCCCcc------ceeCccccCCCcccceEEEEeCc--hh-hHhhhcCCcccccccccc
Q psy12303 260 DAAWGGGLLLSKKYR-HPRLTGIERADS------VTWNPHKLMGTLLQCSTIHFKQD--GL-LISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 260 D~a~~~~~~~~~~~~-~~~~~~~~~~D~------~~~s~hK~~~~p~~~g~~~~~~~--~~-~~~~~~~~~~~l~~~~~~ 329 (480)
|+||+++..+.+..+ ...+.+ +.+|+ ++.|+||++++|.++|++++++. .. ...... ....+ ..
T Consensus 347 DeA~~~~~~~~~~~~~~~~~~g-~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~-~~~~~-~s--- 420 (755)
T 2vyc_A 347 DEAWYGYARFNPIYADHYAMRG-EPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQ-AYMMH-AT--- 420 (755)
T ss_dssp ECTTCTTGGGCGGGTTSSSSCS-CCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHH-HHHHT-SC---
T ss_pred ECcCchhcccCcccCCcchhcC-CcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHH-HHHHh-CC---
Confidence 999987644443321 101111 01676 99999999998888899988775 11 011000 00000 00
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC---------eEEecCCce---
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK---------FYLILEPEM--- 397 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g---------~~~~~~~~~--- 397 (480)
++.++ ....++-.+++.+..++..+..++..++++++++.|++ +++ +++++++..
T Consensus 421 -------~sp~~-----~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~-l~~~~~~~~~~~~~~~~~~~~~~~ 487 (755)
T 2vyc_A 421 -------TSPLY-----AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR-LYKEFTADGSWFFKPWNKEVVTDP 487 (755)
T ss_dssp -------SSCCH-----HHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTTCCCCEESSCSEEECT
T ss_pred -------CCHHH-----HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccccccccccceeeccCchhcccc
Confidence 00000 11223334455554454577889999999999999998 778 887764321
Q ss_pred ----------------------------------------------eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 398 ----------------------------------------------VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 398 ----------------------------------------------~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
..+.|...+....+.-. + ..+. ...+.+.
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~-~--~g~~--~~~l~~~ 562 (755)
T 2vyc_A 488 QTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELE-E--TGVP--AALVTAW 562 (755)
T ss_dssp TTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBC-S--SCCC--HHHHHHH
T ss_pred ccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCcc-c--cCCc--HHHHHHH
Confidence 11222111101111000 0 0000 1356677
Q ss_pred HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 432 MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 432 l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
|.+.|+ .+... + .+.+|++ +++.+|++++++++++|.++.+
T Consensus 563 L~~~gI-~~e~~---~-~~~v~~~-~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 563 LGRHGI-VPTRT---T-DFQIMFL-FSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp HHTTTC-CCSEE---C-SSEEEEE-CCTTCCTTTTHHHHHHHHHHHH
T ss_pred HHHCCC-EEeec---C-CCeEEEE-ECCCCCHHHHHHHHHHHHHHHH
Confidence 777663 22221 3 5789999 8899999999999999998754
No 139
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.91 E-value=1.5e-22 Score=200.22 Aligned_cols=216 Identities=12% Similarity=0.073 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~ 187 (480)
...+++++.+++++|.+ ++++++||++|+..++.++.+ ||+ .|+++.+.|+++.. .+..
T Consensus 62 ~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~~--------------~gd-~Vl~~~~~y~~~~~~~~~~~~~ 124 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTILK--------------AGD-HLISDECLYGCTHALFEHALTK 124 (404)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEESCCCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHhC--------------CCC-EEEEeCCCchhHHHHHHHHHHH
Confidence 33445677788889986 588888999999999887643 455 78888999999888 6777
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH-cCcEEEeecccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK-YNMWLHVDAAWGGG 266 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~-~~~~l~vD~a~~~~ 266 (480)
.|. +++.+|.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++ +|+++++|++|+.+
T Consensus 125 ~g~---~~~~v~~~-----d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~ 190 (404)
T 1e5e_A 125 FGI---QVDFINTA-----IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSP 190 (404)
T ss_dssp TTC---EEEEECTT-----STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCT
T ss_pred cCC---EEEEECCC-----CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchh
Confidence 787 78888876 788999988754 8999999999999999999999999999 99999999999987
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhH-hhhcCCcccccccccccCcccCCCCccccC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLI-SCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
....+. .. ++|+++.|+||++++|.+ +|++++++ +.+. ........+.
T Consensus 191 ~~~~~~-~~-------~~di~~~S~sK~~~~~g~ri~G~~~~~~-~~~~~~l~~~~~~~~-------------------- 241 (404)
T 1e5e_A 191 MITNPV-DF-------GVDVVVHSATKYINGHTDVVAGLICGKA-DLLQQIRMVGIKDIT-------------------- 241 (404)
T ss_dssp TTCCGG-GG-------TCSEEEEETTTTTTCSSCCCCEEEEECH-HHHHHHHHTCCCCCC--------------------
T ss_pred hhCCcc-cc-------CCEEEEEcCccccCCCCCCeEEEEEECH-HHHHHHHHHHHHhCC--------------------
Confidence 653221 22 789999999999998765 58887654 3443 3322111110
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFY 390 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~ 390 (480)
+.....+..|+++..+. .+..+.++..++++.+.+.+++ .+.+.
T Consensus 242 g~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 285 (404)
T 1e5e_A 242 GSVISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKS-HPAVE 285 (404)
T ss_dssp CCCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHT-CTTEE
T ss_pred CCCCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHh-CCCee
Confidence 01123455666665542 3455667777888888888888 65553
No 140
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.91 E-value=1e-22 Score=206.64 Aligned_cols=334 Identities=11% Similarity=0.012 Sum_probs=213.7
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhC-C--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIG-W--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g-~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
...|..+.+...+.+++.+++.+..| . +++++++|+|+++|+..++.++.+. |.. + +..|+++.+.
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~--------gd~--~-~d~Vlv~~p~ 190 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSG--------GGK--S-RTGVMIPIPQ 190 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCC--------CGG--G-SEEEEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCC--------CCC--C-CCEEEEeCCC
Confidence 35566677778899999999998885 4 5678999999999999998877541 110 1 2389999999
Q ss_pred chhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 178 HYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 178 h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
|+++..++..+|. +++.+++++ ++.+|+++|++++++... +.++++|++++++||||.+.+ +++|+++|++
T Consensus 191 y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~ 266 (498)
T 3ihj_A 191 YPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWE 266 (498)
T ss_dssp CTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 9999999999988 788888875 468999999999987532 124899999999999999955 6779999999
Q ss_pred cCcEEEeeccccccccccc-cccC--cccCCC-----CCCc-cceeCccccCC--CcccceEEEE--eCchhhHhhhcCC
Q psy12303 253 YNMWLHVDAAWGGGLLLSK-KYRH--PRLTGI-----ERAD-SVTWNPHKLMG--TLLQCSTIHF--KQDGLLISCNQMS 319 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~-~~~~--~~~~~~-----~~~D-~~~~s~hK~~~--~p~~~g~~~~--~~~~~~~~~~~~~ 319 (480)
||+++++|++|+.+.+... .... .....+ .... +++.|++|.+. .+..+|++++ .++.+........
T Consensus 267 ~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~ 346 (498)
T 3ihj_A 267 EKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLL 346 (498)
T ss_dssp HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHH
T ss_pred cCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHH
Confidence 9999999999988765321 1100 000000 0122 34568999994 4567888875 4555544332111
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG------------DEGFEKQIDRLMELAEYMVKKIKSMPD 387 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g------------~~~~~~~~~~~~~l~~~l~~~l~~~~~ 387 (480)
..+. + ...+..++....+. .+...++.++..++++++.+.|++ +|
T Consensus 347 ~~~~-------------------~---~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~ 403 (498)
T 3ihj_A 347 SVRL-------------------C---PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ-VP 403 (498)
T ss_dssp HHSC-------------------C---CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT-ST
T ss_pred hccC-------------------C---CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 1110 0 11222222222221 123456677888999999999999 89
Q ss_pred CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHH--HHHHHHhcccEEEeeeeeC--CcccEEEEecccCCCCH
Q psy12303 388 KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPI--LKGRMMQAGTMMVGYQPLN--DLPNFFRNIISSAAVTE 463 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~--i~~~l~~~g~~~~~~~~~~--~~~~~~R~~~~~~~~t~ 463 (480)
|+++. +|+.++++|...+.... ..+..+....-..+ +.+.|.+.|++++....+. ....++|+++ ..++
T Consensus 404 g~~~~-~p~gg~~~~~~l~~p~~---~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~---~~~~ 476 (498)
T 3ihj_A 404 GIHCN-PLQGAMYAFPRIFIPAK---AVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI---LPPV 476 (498)
T ss_dssp TEECC-CCCBSSEECCEECCCHH---HHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC---CSCH
T ss_pred CcEec-CCCeEEEEEEeccCchh---hhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe---CCCH
Confidence 99874 67777776632211000 00000000000122 2445556776555432221 1146999995 2689
Q ss_pred HHHHHHHHHHHHhhcc
Q psy12303 464 GDIDFLLTEMDRLGHD 479 (480)
Q Consensus 464 ~di~~~~~~l~~~~~~ 479 (480)
++++.++++|+++.++
T Consensus 477 e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 477 EKLKTVLQKVKDFHIN 492 (498)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887653
No 141
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.91 E-value=2.1e-23 Score=201.06 Aligned_cols=280 Identities=13% Similarity=0.073 Sum_probs=186.4
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH----HcCCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA----VCGLG 191 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~----~~g~~ 191 (480)
++++.+++++|.+ +.+++++||+|+..++.++.. ||+ .|+++..+|+++...+. ..|.
T Consensus 2 ~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~~~~~--------------~g~-~v~~~~~~~~~~~~~~~~~~~~~g~- 63 (331)
T 1pff_A 2 ALEGKIAKLEHAE--ACAATASGMGAIAASVWTFLK--------------AGD-HLISDDCLYGCTHALFEHQLRKFGV- 63 (331)
T ss_dssp HHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCC--------------TTC-EEEEESCCCHHHHHHHHTHHHHTTC-
T ss_pred hHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcC--------------CCC-EEEEcCCCcchHHHHHHHHHHhcCC-
Confidence 4567799999987 466666779999999887632 445 78888899999877753 3566
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH-cCcEEEeecccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK-YNMWLHVDAAWGGGLLLS 270 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~-~~~~l~vD~a~~~~~~~~ 270 (480)
+++.++. .|+++|+++++++ +++|++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+....
T Consensus 64 --~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~ 130 (331)
T 1pff_A 64 --EVDFIDM-----AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN 130 (331)
T ss_dssp --EEEEECT-----TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC
T ss_pred --EEEEeCC-----CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC
Confidence 7777876 3788999888754 8999999999999999999999999999 999999999999876543
Q ss_pred ccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCC
Q psy12303 271 KKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHND 348 (480)
Q Consensus 271 ~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~ 348 (480)
+. .. ++|+++.|+||++++|.+ +|++++++++...........|. +....
T Consensus 131 ~~-~~-------~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~--------------------~~~~~ 182 (331)
T 1pff_A 131 PL-DL-------GVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDIT--------------------GAIIS 182 (331)
T ss_dssp GG-GG-------TCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCC--------------------CCCCC
T ss_pred hh-hc-------CCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhc--------------------CCCCC
Confidence 32 23 789999999999998766 67887665355444332221100 00122
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--------------CeEEecC---CceeEEEEEeecCccCC
Q psy12303 349 IFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD--------------KFYLILE---PEMVNVSFWYLPTRVRN 411 (480)
Q Consensus 349 ~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~--------------g~~~~~~---~~~~~v~f~~~~~~~~~ 411 (480)
.+..+..+.. .+.+..+.++..++.+.+.+.+++ .+ +++++.+ ...++++|.+. .
T Consensus 183 ~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~l~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~--- 254 (331)
T 1pff_A 183 PHDAWLITRG--TLTLDMRVKRAAENAQKVAEFLHE-HKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--G--- 254 (331)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-CTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--S---
T ss_pred HHHHHHHHcC--cchHHHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--C---
Confidence 3344443333 223344444555556666666554 32 3332211 13455666432 1
Q ss_pred CchhhHHHHhhhhhHHHHHHHHhcccEEEeee--e----------------------eCCc-ccEEEEecccCCCCHHHH
Q psy12303 412 MPHEKRLNILGEITPILKGRMMQAGTMMVGYQ--P----------------------LNDL-PNFFRNIISSAAVTEGDI 466 (480)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~--~----------------------~~~~-~~~~R~~~~~~~~t~~di 466 (480)
..++.+.+.+.|++..... . ..+. .+++|++ ++..+|+++|
T Consensus 255 -------------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis-~~~~~t~~~i 320 (331)
T 1pff_A 255 -------------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLS-VGCENVQDII 320 (331)
T ss_dssp -------------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEE-CCSSCHHHHH
T ss_pred -------------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEE-EecCCHHHHH
Confidence 1245566667775432210 0 0111 4799999 7788999999
Q ss_pred HHHHHHHHHh
Q psy12303 467 DFLLTEMDRL 476 (480)
Q Consensus 467 ~~~~~~l~~~ 476 (480)
+.+++.|+++
T Consensus 321 ~~l~~~l~~~ 330 (331)
T 1pff_A 321 DDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 142
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=2.3e-22 Score=198.44 Aligned_cols=297 Identities=13% Similarity=0.070 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++++++++|. ..+++++|||+|+..++.+++... ....|.. +|+..|++...+|++....+..++..
T Consensus 78 ~~~~~l~~~la~~~g~--~~v~~~~~gt~a~~~al~~~~~~~---~~~~~~~--~~~~~vi~~~~~~~~~~~~~~~~~~~ 150 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTNK--EMVLPMNTGAEAVETAIKTARRWA---YDVKKVE--ANRAEIIVCEDNFHGRTMGAVSMSSN 150 (392)
T ss_dssp TTHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHH---HHTSCCC--TTCCEEEEETTCCCCSSHHHHHTCSC
T ss_pred HHHHHHHHHHHHhcCC--CEEEEeCcHHHHHHHHHHHHHHhh---hhccCCC--CCCcEEEEEcCCcCCCCHhhhhccCC
Confidence 4455677889999983 469999999999999999876520 0011211 22336777666665544444333211
Q ss_pred ----------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 192 ----------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 192 ----------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
...+..++.+ |+++|+++++++ +++|++++++|++|.+.| +++|.++|++||+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~l 219 (392)
T 3ruy_A 151 EEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLF 219 (392)
T ss_dssp TTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEE
T ss_pred hhhccccCCCCCCCeeeCcc-----cHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 1124445443 899999999744 999999999999999998 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
|+|++|+++......... ...++ ..|++++| |.++++ .+.|+++.++ +........ ...
T Consensus 220 i~De~~~~~~~~g~~~~~-~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~~~~~~~----~~~----------- 279 (392)
T 3ruy_A 220 VADEIQTGLGRTGKVFAC-DWDNV-TPDMYILG--KALGGGVFPISCAAANR-DILGVFEPG----SHG----------- 279 (392)
T ss_dssp EEECTTTTTTTTSSSSGG-GGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHHTTCCTT----SSC-----------
T ss_pred EEeechhCCCccccchhh-hccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHHhhhccC----CcC-----------
Confidence 999999754332211111 22233 56887764 988764 5688888643 433322110 000
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CCeEEecCCceeEEEEEeecCccCCCch
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP--DKFYLILEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~--~g~~~~~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
..+ ....+...++...+.....++..++..++++++.+.|++ . +.+... ++....+.+.+ +. .
T Consensus 280 ~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~~~g~~~~~~~-~~--~---- 344 (392)
T 3ruy_A 280 STF------GGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKE-IDNPMITEV-RGKGLFIGIEL-NE--P---- 344 (392)
T ss_dssp CSS------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTT-CCCTTEEEE-EEETTEEEEEE-SS--C----
T ss_pred CCC------CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-hcCCCceEE-EeeeeEEEEEE-cc--h----
Confidence 000 122333333333322111266788889999999999998 5 345443 34445555543 22 1
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..++.+.|.+.|+ .+.+. + .+++|++ ++..+|++|+++++++|++++
T Consensus 345 ----------~~~l~~~l~~~gi-~v~~~---~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 345 ----------ARPYCEQLKAAGL-LCKET---H-ENVIRIA-PPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ----------SHHHHHHHHTTTE-ECCCB---T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHCCc-EEecC---C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHh
Confidence 2456778888884 34331 2 5799999 888999999999999999875
No 143
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=3.3e-22 Score=197.16 Aligned_cols=309 Identities=16% Similarity=0.081 Sum_probs=196.8
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .++++++||+|+..++.+++... ..+. .||+ .|+++..+|+++..++...|. +
T Consensus 37 ~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~-----~~~~--~~g~-~Vi~~~~~~~~~~~~~~~~g~---~ 103 (390)
T 3b8x_A 37 KQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTK-----KPRL--KKGD-EIIVPAVSWSTTYYPLQQYGL---R 103 (390)
T ss_dssp HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSS-----SCSC--CTTC-EEEEESSSCHHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhh-----hcCC--CCcC-EEEECCCCcHHHHHHHHHcCC---E
Confidence 34556688888887 48999999999999998773110 0011 1445 788999999999999999888 8
Q ss_pred eEEeeCCCC-CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDKR-GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.++++++ +.+|+++|+++++++ +++|++++ ++|...|+++|.++|++||+++|+|++|+.+... +..
T Consensus 104 ~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~ 173 (390)
T 3b8x_A 104 VKFVDIDINTLNIDIESLKEAVTDS------TKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNK 173 (390)
T ss_dssp EEEECBCTTTCSBCHHHHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTE
T ss_pred EEEEecCccccCcCHHHHHHHhCcC------CeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCc
Confidence 889999875 899999999998764 88888863 5788999999999999999999999999976554 211
Q ss_pred cCcccCCCCCCccceeC--ccccCCCcccceEEEEeCchhhHhhhcCCc-ccccc-----------cccccCcccCCCCc
Q psy12303 274 RHPRLTGIERADSVTWN--PHKLMGTLLQCSTIHFKQDGLLISCNQMSA-EYLFM-----------QDKLYDVRYDTGDK 339 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s--~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~-~~l~~-----------~~~~~~~~~~~~~~ 339 (480)
.. +. ..|+.+++ +.|.+++|.| |++++++..+......... .+... ....+...+. +
T Consensus 174 ~~----g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~ 244 (390)
T 3b8x_A 174 CA----GT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFK---F 244 (390)
T ss_dssp ET----TS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSC---B
T ss_pred cc----cc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccc---e
Confidence 11 11 23444433 3444554444 7777766444332211110 10000 0000000000 0
Q ss_pred cccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeE--EEEEeecCccCCCch
Q psy12303 340 VIQCGRH--NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVN--VSFWYLPTRVRNMPH 414 (480)
Q Consensus 340 ~~~~~r~--~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~--v~f~~~~~~~~~~~~ 414 (480)
. ..|.+ ...+.+++++.. .+.+++..++..++++++.+.|++ ++++++..++ ..+. +.+.+.+. .+.+
T Consensus 245 ~-~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~- 317 (390)
T 3b8x_A 245 V-LPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKD-HPYLDVQQETGESSWFGFSFIIKKD--SGVI- 317 (390)
T ss_dssp C-SCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTT-CSSEEECCCCSBCCCCEEEEEECTT--SCCC-
T ss_pred e-ccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcC-CCCcccCCCCCCcccEEEEEEecCc--Cccc-
Confidence 0 01222 345666666655 467788899999999999999999 8899986433 2333 22232211 0111
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEee--e------ee-C-------C--------cccEEEEecccCCCCHHHHHHHH
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGY--Q------PL-N-------D--------LPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~--~------~~-~-------~--------~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
..++.+.|.+.|+.+... . +. . . ....+|++ +++.+|++||++++
T Consensus 318 ----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~~~~~t~~di~~i~ 386 (390)
T 3b8x_A 318 ----------RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVG-NHQIELFDEIDYLR 386 (390)
T ss_dssp ----------HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEE-CCSSCCHHHHHHHH
T ss_pred ----------HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEee-CCCCCCHHHHHHHH
Confidence 235667777777543220 0 00 0 0 01479999 89999999999999
Q ss_pred HHH
Q psy12303 471 TEM 473 (480)
Q Consensus 471 ~~l 473 (480)
+.|
T Consensus 387 ~~l 389 (390)
T 3b8x_A 387 EVL 389 (390)
T ss_dssp HHT
T ss_pred Hhh
Confidence 886
No 144
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=9.5e-23 Score=201.41 Aligned_cols=294 Identities=13% Similarity=0.058 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++++++++++|.++.++++|+|||+|+..++.+++... +|+.+|+.+...|.+...++...|.
T Consensus 86 ~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~------------~~~~vi~~~~~y~~~~~~~~~~~g~ 153 (395)
T 1vef_A 86 TPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHT------------GRKKFVAAMRGFSGRTMGSLSVTWE 153 (395)
T ss_dssp CHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHH------------SCCEEEEETTCCCCSSHHHHHTCCC
T ss_pred CHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHh------------CCCeEEEEcCCcCCCchhhhhhcCC
Confidence 3556678888999998766789999999999999998875210 3353555555556666667776665
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
.. ..+..++. .|+++|+++++++ +++|+++..++++|.+.| +++|.++|++||+++
T Consensus 154 ~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~l 222 (395)
T 1vef_A 154 PKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALL 222 (395)
T ss_dssp HHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEE
T ss_pred cccccccCCCCCCeeEeCC-----CcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEE
Confidence 20 01334443 4899999988753 889999888889999877 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTG 337 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 337 (480)
|+|++|+++......... ...++ .+|++ +++|++++|.++|+++++++ +...... ... ..
T Consensus 223 i~Dea~~~~~~~g~~~~~-~~~~~-~~d~~--s~sK~~~~g~~~G~~~~~~~-~~~~l~~---~~~------------~~ 282 (395)
T 1vef_A 223 ILDEIQTGMGRTGKRFAF-EHFGI-VPDIL--TLAKALGGGVPLGVAVMREE-VARSMPK---GGH------------GT 282 (395)
T ss_dssp EEECTTTTTTTTSSSSTH-HHHTC-CCSEE--EECGGGGTTSSCEEEEEEHH-HHHTSCT---TSS------------CC
T ss_pred EEEecccCCccCCchhHh-hhcCC-CCCEE--EEcccccCCCceEEEEehHH-HHhhhcc---CCc------------CC
Confidence 999999953221111111 11222 46776 46999998888999998754 4332211 000 00
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC--eEEecCCceeEEEEEeecCccCCCchh
Q psy12303 338 DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK--FYLILEPEMVNVSFWYLPTRVRNMPHE 415 (480)
Q Consensus 338 ~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g--~~~~~~~~~~~v~f~~~~~~~~~~~~~ 415 (480)
.+ ........++..+++.+.. .+..++..++++++.+.|++ ... +... ++....+.+.+ +..
T Consensus 283 ~~---~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~-~~~g~~~~~~~-~~~------- 346 (395)
T 1vef_A 283 TF---GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRA-IPSPKIREV-RGMGLMVGLEL-KEK------- 346 (395)
T ss_dssp SS---TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHT-SCCTTEEEE-EEETTEEEEEE-SSC-------
T ss_pred Cc---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-hhcCceEEE-EEEEEEEEEEE-cCh-------
Confidence 00 0000122233333443322 35678888899999999988 532 2211 22333444433 211
Q ss_pred hHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 416 KRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 416 ~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|. +.|+. +.+. + .+++|++ ++..++++++++++++|+++++
T Consensus 347 ---------~~~l~~~l~~~~gi~-v~~~---~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~l~ 395 (395)
T 1vef_A 347 ---------AAPYIARLEKEHRVL-ALQA---G-PTVIRFL-PPLVIEKEDLERVVEAVRAVLA 395 (395)
T ss_dssp ---------SHHHHHHHHHHHCEE-CEES---S-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHC
T ss_pred ---------HHHHHHHHHHHCCeE-EecC---C-CCEEEEe-CCCCCCHHHHHHHHHHHHHHhC
Confidence 135667777 77744 3331 3 5799999 7788999999999999998753
No 145
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.91 E-value=4.9e-24 Score=207.89 Aligned_cols=307 Identities=15% Similarity=0.062 Sum_probs=200.3
Q ss_pred ChhhHHHHHHHHHHHHHHhCCC-CCCeEECCCh-hHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 107 APVFILMETVVLEKMRQIIGWQ-GGDSILAPGG-SISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~gg-t~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
++...++.+++++++++++|.+ ++++++|+|+ |+|+..++...... | .+|+ +|+++..+|++.. .
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~--------~---~~g~-~vi~~~~~~~~~~-~ 109 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTK--------G---TIGN-YVLTGSWSEKALK-E 109 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCT--------T---CEEE-EEECSHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCC--------C---Cccc-EEEecchhHHHHH-H
Confidence 5666677888999999999996 3579999998 99999888776431 1 1223 6778777777643 3
Q ss_pred HHHcCCCCCCeEEeeCCC-CCCCCHHHHHH-HHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecc
Q psy12303 185 AAVCGLGTDNCVEVPSDK-RGRLIPSELER-LVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~~-~~~~d~~~L~~-~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a 262 (480)
+...| +++.+|.++ ++.+|+++|++ +++++ |++|++++++|++|.+.| + |+++||+++++|++
T Consensus 110 ~~~~g----~~~~v~~~~~~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a 174 (360)
T 1w23_A 110 AKLLG----ETHIAASTKANSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ--N---FPEINHAPLIADMS 174 (360)
T ss_dssp HHTTS----EEEEEEECGGGTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS--S---CCCCCSSCEEEECT
T ss_pred HHHhC----CeEEeecccccCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc--c---ccccCCceEEEech
Confidence 44443 577888875 66789999988 77543 899999999999999865 2 33389999999999
Q ss_pred ccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 263 WGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
|+.+..+.+. . ..|+++.++||+++ |.|+|++++++. .+.......+.++ ............
T Consensus 175 ~~~~~~~~~~------~---~~di~~~s~sK~~~-~~G~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~------ 236 (360)
T 1w23_A 175 SDILSRPLKV------N---QFGMIYAGAQKNLG-PSGVTVVIVKKD-LLNTKVEQVPTML-QYATHIKSDSLY------ 236 (360)
T ss_dssp TTTTSSCCCG------G---GCSEEEEETTTTTS-CTTCEEEEEEHH-HHCSCCTTCCGGG-CHHHHHHTTTCS------
T ss_pred hhcCCCCcCc------c---cCCEEEEEcccccC-CCCcEEEEEcHH-HHhhcccCCcchh-hhhhhhhccCCC------
Confidence 9987654321 1 23899999999987 668999998654 3332221111111 000000000000
Q ss_pred CCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCe-EEecCC--cee-EEEEEeecCccCCCchhh
Q psy12303 343 CGRH-NDIFKLWLQWRAKGDE-GFEKQIDRLMELAEYMVKKIKSMPDKF-YLILEP--EMV-NVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 343 ~~r~-~~~l~~~~~l~~~g~~-~~~~~~~~~~~l~~~l~~~l~~~~~g~-~~~~~~--~~~-~v~f~~~~~~~~~~~~~~ 416 (480)
.+.. ....++..+++.+... +++++.++..++++++.+.|++ ++++ ....+| ..+ .+++.+ +..
T Consensus 237 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-------- 306 (360)
T 1w23_A 237 NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE-SNGFYVGHAEKGSRSLMNVTFNL-RNE-------- 306 (360)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-TTTSSEESSCGGGBCSSEEEEEC-SSH--------
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-ccCcccccCCchhccCcEEEEEc-CCC--------
Confidence 0101 1223344445544333 6788899999999999999999 7765 553223 234 444432 211
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ...++.+.|.+.|+.+ .+.. .. .+++|++ ++..++++++++++++|++++++
T Consensus 307 ----~--~~~~~~~~l~~~gi~~-~~~~-~~-~~~iRis-~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 307 ----E--LNQQFLAKAKEQGFVG-LNGH-RS-VGGCRAS-IYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ----H--HHHHHHHHHHHTTEES-CBCC-TT-TCSEEEE-CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ----c--cHHHHHHHHHHCCeee-ecCC-CC-CCeEEEE-ecCCCCHHHHHHHHHHHHHHHhh
Confidence 0 0234666777788543 2211 11 4689999 77788999999999999988754
No 146
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.91 E-value=1.7e-22 Score=200.90 Aligned_cols=343 Identities=11% Similarity=-0.033 Sum_probs=212.9
Q ss_pred cCCCCCccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHH
Q psy12303 69 RTGHPMFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFL 147 (480)
Q Consensus 69 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~ 147 (480)
...+..|.+..+....++.+ .+.+..........|....+..++.+++.+++....+.+ +.++++|+|||+|+..++.
T Consensus 41 ~l~~g~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~ 119 (413)
T 3t18_A 41 NAALGTLLDDKGKIIALPSV-YDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIF 119 (413)
T ss_dssp ECCSCCCBCTTSCBCCCHHH-HHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHH
T ss_pred eccccCccCCCCCcCChHHH-HHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHH
Confidence 34455555544344444444 355554332222345445566777888777776665542 2379999999999999998
Q ss_pred HHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC-CCCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 148 AARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS-DKRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~-~~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+..+ ||+ .|+++.++|.++...++..|. +++.+|. ++++.+|+++|++++++.... +++
T Consensus 120 ~~~~--------------~gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--~~~ 179 (413)
T 3t18_A 120 SYLD--------------EGD-PLICHDYYWAPYRKICEEFGR---NFKTFEFFTDDFAFNIDVYKEAIDEGIRD--SDR 179 (413)
T ss_dssp HHCC--------------SSC-EEEEESSCCTHHHHHHHHHTC---EEEEECCBCTTSSBCHHHHHHHHHHHHHH--CSE
T ss_pred HhcC--------------CCC-EEEECCCCcccHHHHHHHhCC---eEEEeeccCCCCCcCHHHHHHHHHHHhhc--CCC
Confidence 7753 556 788888999999999999998 8889998 456799999999999863211 155
Q ss_pred -EEEeccC-CCccccccChHHHH---HHHH------HcCcEEEeeccccccccccccccC--cccCCCCCCc---cceeC
Q psy12303 227 -FVNCTSG-TTVLGAFDPIEEIA---DICQ------KYNMWLHVDAAWGGGLLLSKKYRH--PRLTGIERAD---SVTWN 290 (480)
Q Consensus 227 -~v~~~~~-~~~~G~~~~l~~I~---~i~~------~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~D---~~~~s 290 (480)
+|+++++ +||+|.+.|.+++. ++|+ +||+++++|++|+.+......... ....++ ..| +++.|
T Consensus 180 ~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S 258 (413)
T 3t18_A 180 IASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNL-PRNLFVVVAFS 258 (413)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTC-CTTEEEEEEEE
T ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhc-CCCeeEEEEEe
Confidence 7888888 99999998865555 5555 899999999999876643221111 011222 123 56679
Q ss_pred ccccCCC-cccceEEEEe--CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcH------
Q psy12303 291 PHKLMGT-LLQCSTIHFK--QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD------ 361 (480)
Q Consensus 291 ~hK~~~~-p~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~------ 361 (480)
++|.++. +.++|+++.. +++......... .+..... + .....+...+....+..
T Consensus 259 ~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~-----~~~~~~~~~a~~~~l~~~~~~~~ 321 (413)
T 3t18_A 259 MSKSHTAYGLRSGAAVGISSSKEIIEEFEASL-AHSARCN-----------W-----SNGTHAAQNILIELERAENKKIY 321 (413)
T ss_dssp HHHHTTCGGGCCEEEEEEESCHHHHHHHHHHH-HHHHHHH-----------T-----SSCCHHHHHHHHHTTSHHHHHHH
T ss_pred cCccCCCcCcCcEEEEEecCCHHHHHHHHHHH-HHhhhcc-----------c-----cCCChHHHHHHHHHhcChHHHHH
Confidence 9999984 4668988863 555444332110 0000000 0 00223344444443322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEE
Q psy12303 362 -EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMV 440 (480)
Q Consensus 362 -~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~ 440 (480)
+..+++.++..++.+++.+.|++ . |+++. +|..+.+.|.-.. . ..++.+.|.+.|+.+
T Consensus 322 ~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~-~~~~~~~~~~~~~-~----------------~~~~~~~l~~~gv~v- 380 (413)
T 3t18_A 322 EQELVDLRNMLKSRADVFVTAAKE-N-KLTMI-PYFGGFFTFIPTD-K----------------AFDIVKDLEKENIFT- 380 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCB-CCCSSSCEEEECS-C----------------HHHHHHHHHHTTEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-c-CCCcc-CCCceEEEEeCCC-C----------------HHHHHHHHHhCCEEE-
Confidence 23445667788889999999999 5 88764 5666655542110 0 235667777888443
Q ss_pred eeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 441 GYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 441 ~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
.+ + .+++|+++. ..++++.++.+.+.++++.
T Consensus 381 ~~----g-~~~iRis~~-~~~~~~~l~~l~~~l~~~~ 411 (413)
T 3t18_A 381 IP----S-AKGIRVAIC-GVGEEKIPKLVQRLAFYTN 411 (413)
T ss_dssp EE----C-SSEEEECTT-TSCGGGHHHHHHHHHHHHH
T ss_pred ec----C-CCceEEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 33 2 479999944 3344444666666665543
No 147
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=1.3e-22 Score=197.62 Aligned_cols=332 Identities=12% Similarity=0.064 Sum_probs=202.3
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHc-CcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATA-NTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAA 149 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~ 149 (480)
++..|++....+..+ ..+.+++..+. ......|...+...+ +++++++++|.+. .++++|||+|+..++.++
T Consensus 10 ~~~~~l~~~~~p~~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~----l~~~la~~~~~~~--~i~~~~G~~a~~~al~~~ 82 (357)
T 3lws_A 10 QQTTGQISGHGKRNV-GVLKTAFAAVADEMASDQYGTGAIIEP----FEQKFADVLGMDD--AVFFPSGTMAQQVALRIW 82 (357)
T ss_dssp HTCSEESSBSSCCBH-HHHHHHHTTSCTTCBCEETTEETTHHH----HHHHHHHHHTCSE--EEEESCHHHHHHHHHHHH
T ss_pred HhhcccccCCCCCCH-HHHHHHHHHhhcccCcccccCChHHHH----HHHHHHHHhCCCc--EEEecCcHHHHHHHHHHH
Confidence 344566655554433 33434444321 112233444444444 5566888899864 577789999999999888
Q ss_pred HHhcCchhHhcCCCccCCce-EEEecCCCchhHHH---HHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc
Q psy12303 150 RHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRS---CAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP 225 (480)
Q Consensus 150 ~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~---~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~ 225 (480)
... |+. +|+++...|++... .+...|. +++.+|. +++.+|+++|+++. + +
T Consensus 83 ~~~--------------gd~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~-~~~~~d~~~l~~~~--~------~ 136 (357)
T 3lws_A 83 SDE--------------TDNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGA-ADRLMTLDEIKALP--D------I 136 (357)
T ss_dssp HHH--------------HTCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSC-TTSCCCHHHHHTCC--S------C
T ss_pred hhc--------------CCCcEEEecccceeeeeccchhhhccCc---EEEEecC-CCCCcCHHHHhcCc--C------c
Confidence 763 232 78888888887654 3444555 6777774 46789999998871 1 7
Q ss_pred EEEEeccCCCcc-ccccC---hHHHHHHHHHcCcEEEeecccccccccc-c-cccCcccCCCCCCccceeCccccCCCcc
Q psy12303 226 FFVNCTSGTTVL-GAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLS-K-KYRHPRLTGIERADSVTWNPHKLMGTLL 299 (480)
Q Consensus 226 ~~v~~~~~~~~~-G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~-~-~~~~~~~~~~~~~D~~~~s~hK~~~~p~ 299 (480)
++|++++++|++ |.+.+ +++|.++|++||+++|+|++|....... . .... .. ..+|+++.++||++++|.
T Consensus 137 ~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~---~~~d~~~~s~sK~~~~~~ 212 (357)
T 3lws_A 137 ACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAE-IA---GLFDSIYISFYKGLGGIA 212 (357)
T ss_dssp SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHH-HH---TTSSEEEEESSSTTCCSS
T ss_pred ceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHH-HH---hcCCEEEEeccccCCCCc
Confidence 789999999998 88765 8999999999999999999987322110 0 0000 11 257888999999997777
Q ss_pred cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy12303 300 QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMV 379 (480)
Q Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~ 379 (480)
+ |+++ .++++..........+- . +. +...... .+++..+ +...+.+++..++++++.
T Consensus 213 g-g~~~-~~~~~~~~~~~~~~~~~-~-----------~~------~~~~~~~-~~~~~~l--~~~~~~~~~~~~~~~~l~ 269 (357)
T 3lws_A 213 G-AILA-GPAAFCQTARIWKRRYG-G-----------DL------ISLYPYI-VSADYYY--ELRKDRMGQYYEQAKQLA 269 (357)
T ss_dssp C-EEEE-ECHHHHHHHHHHHHHTT-C-----------CC------SCCHHHH-HHHHHHH--HHHTTCHHHHHHHHHHHH
T ss_pred e-EEEE-cCHHHHHHHHHHHHHhc-C-----------Cc------ccchHHH-HHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 6 6655 56655544321110000 0 00 0001111 1112221 123344555678899999
Q ss_pred HHHhcCCCCeEEe-cCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-CCcccEEEEecc
Q psy12303 380 KKIKSMPDKFYLI-LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-NDLPNFFRNIIS 457 (480)
Q Consensus 380 ~~l~~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-~~~~~~~R~~~~ 457 (480)
+.|++ ++++++. .++..+.+++.+..... . ...++.+.|.++|+++...... .+ ..++|+++.
T Consensus 270 ~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~l~~~Gi~v~~g~~~~~~-~~~~r~~i~ 334 (357)
T 3lws_A 270 EQFNA-LPGVHTTPEVPVSNMFHLHFDGQAA-----------D--ISPKLEQVQEETGLGFVGYLVDKDG-YCSTEISVG 334 (357)
T ss_dssp HHHHT-STTEEEESSSCSSSEEEEEEESCHH-----------H--HHHHHHHHHHHHCEESCSCCEECSS-EEEEEEEBC
T ss_pred HHHHh-CCCCeeccCCCcceEEEEEecCChH-----------H--HHHHHHHHHHhcCeEEecccccCCC-ceEEEEEec
Confidence 99999 8999985 34555555444321100 0 0235667788888543322111 23 468999843
Q ss_pred c--CCCCHHHHHHHHHHHHHhh
Q psy12303 458 S--AAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 458 ~--~~~t~~di~~~~~~l~~~~ 477 (480)
. ...+++++++.+++|.+.+
T Consensus 335 ~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 335 DAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHC
T ss_pred chhhhcCHHHHHHHHHHHHHhc
Confidence 2 3468999999999998764
No 148
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.90 E-value=1.2e-22 Score=202.71 Aligned_cols=303 Identities=13% Similarity=0.083 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HHHHHH--Hc
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VRSCAA--VC 188 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~~~~~--~~ 188 (480)
.+++..++++++++|.+. ..++++|||+|+..++.++.. ||+ .|+++..+|.+ ....+. ..
T Consensus 78 ~~~~~a~~~~~~~~~~~~-~~v~~~~Gs~a~~~al~~~~~--------------~gd-~Vi~~~~~~~~~~~~~~~~~~~ 141 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGH-ANVQPHSGAQANGAVMLALAK--------------PGD-TVLGMSLDAGGHLTHGAKPALS 141 (425)
T ss_dssp HHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHCC--------------TTC-EEEEECC---------------
T ss_pred HHHHHHHHHHHHHhCCCC-ceeecCchHHHHHHHHHHccC--------------CCC-EEEEcccccccceecchhhhhc
Confidence 455556688999999876 234689999999999887743 556 78888889987 223332 33
Q ss_pred CCCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 189 GLGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 189 g~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
|.+. .++.++.++ ++.+|+++|++++++. ++++|+++++++ |...++++|.++|++||+++|+|++|+.+.
T Consensus 142 g~~~-~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~ 213 (425)
T 3ecd_A 142 GKWF-NALQYGVSRDTMLIDYDQVEALAQQH-----KPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGV 213 (425)
T ss_dssp ---C-EEEEECCCTTTSSCCHHHHHHHHHHH-----CCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHH
T ss_pred ccce-eeeecCCCcccCccCHHHHHHHHhhc-----CCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhh
Confidence 4322 344566653 4789999999999753 178888887765 788999999999999999999999987665
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC-
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH- 346 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~- 346 (480)
........ . +..+|+++.|+||++++|. .|+++.+++.+............. .+..
T Consensus 214 ~~~~~~~~-~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~ 270 (425)
T 3ecd_A 214 IAAGRHAN-P---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINSAVFPGLQ------------------GGPLM 270 (425)
T ss_dssp HHTTSSCC-G---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHHC-----------------------CCCH
T ss_pred hhcccccC-c---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHhhhCcccc------------------CCccH
Confidence 53322111 1 2247899999999997664 577776655444332211000000 0000
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-ceeEEEEEeecCccCCCchhhHHHHhhhhh
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRLNILGEIT 425 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~ 425 (480)
....+++.++.....++++++.++..++++++.+.|.+ .|++++.++ ....+.+.+.+.... .
T Consensus 271 ~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~~~~~~~~~~~~~~~~--------------~ 334 (425)
T 3ecd_A 271 HVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA--GGVDLVTGGTDNHLLLVDLRPKGLK--------------G 334 (425)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCSSSEEEEECGGGTCC--------------H
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--CCCeeccCCCCceEEEEEeCCCCCC--------------H
Confidence 12233444444444567788899999999999999999 689886533 333444433221111 2
Q ss_pred HHHHHHHHhcccEEEeeeeeCC------cccEEEEecc---cCCCCHHHHHHHHHHHHHhhc
Q psy12303 426 PILKGRMMQAGTMMVGYQPLND------LPNFFRNIIS---SAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 426 ~~i~~~l~~~g~~~~~~~~~~~------~~~~~R~~~~---~~~~t~~di~~~~~~l~~~~~ 478 (480)
..+.+.|.+.|+.+... ...+ ..+.+|+++. ....++++|+++++.|+++++
T Consensus 335 ~~~~~~l~~~gi~v~~~-~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~ 395 (425)
T 3ecd_A 335 AQVEQALERAGITCNKN-GIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFE 395 (425)
T ss_dssp HHHHHHHHHTTEECEEC-CCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEeccc-ccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHh
Confidence 35567777778554421 1111 1358999832 233459999999999988765
No 149
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.90 E-value=3.3e-23 Score=216.58 Aligned_cols=324 Identities=17% Similarity=0.129 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH-HHHcCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC-AAVCGLGT 192 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~-~~~~g~~~ 192 (480)
-.++++.+++++|.+. .+++++|+|+||..++.+... ||+ .|+++..+|.|+..+ +...|.
T Consensus 175 i~e~e~~lA~~~gae~-~i~v~nGtt~an~~ai~al~~--------------pGD-~VLv~~~~H~S~~~~~~~l~Ga-- 236 (730)
T 1c4k_A 175 AVAAEKHAARVYNADK-TYFVLGGSSNANNTVTSALVS--------------NGD-LVLFDRNNHKSVYNSALAMAGG-- 236 (730)
T ss_dssp HHHHHHHHHHHTTCSE-EEEESSHHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHTTTTCC--
T ss_pred HHHHHHHHHHHHCCCc-EEEECCHHHHHHHHHHHHhcC--------------CCC-EEEEcCCchHHHHHHHHHHCCC--
Confidence 4467788999999975 467788888999999888754 556 899999999999988 777676
Q ss_pred CCeEEeeCCCC-----CCCCHHHH-----HHHHHHH-HH--CCCcc-EEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 193 DNCVEVPSDKR-----GRLIPSEL-----ERLVLER-KA--KGDIP-FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 193 ~~v~~v~~~~~-----~~~d~~~L-----~~~i~~~-~~--~~~~~-~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
++++++.+.+ +.+|+++| ++++++. .+ ....+ ++|+++++ |++|.+.|+++|+++|++||+++|
T Consensus 237 -~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~li 314 (730)
T 1c4k_A 237 -RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIE 314 (730)
T ss_dssp -EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEE
T ss_pred -EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEE
Confidence 7777765432 34788888 7776542 11 01123 78899998 589999999999999999999999
Q ss_pred eecccccccccccccc--CcccCCCCCCc----cceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 259 VDAAWGGGLLLSKKYR--HPRLTGIERAD----SVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 259 vD~a~~~~~~~~~~~~--~~~~~~~~~~D----~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
+|+||+.+..+.+..+ .+......++| +++.|+||++++|.++|+++++++.+.. ...++..... ..
T Consensus 315 vDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g-----~~~~i~~~~~--~~ 387 (730)
T 1c4k_A 315 FDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG-----QLRYCDHKHF--NN 387 (730)
T ss_dssp EECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTT-----STTCCCHHHH--HH
T ss_pred EEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcC-----cccccCHHHH--HH
Confidence 9999986544333221 10111011566 8999999999988888999888764311 0011100000 00
Q ss_pred ccCCCCccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc--------------
Q psy12303 333 RYDTGDKVIQCGRHN--DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE-------------- 396 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~--~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~-------------- 396 (480)
.+. .++.+... ...++-.+++.+..++..+.+++..++++++++.|++.++|++++.+..
T Consensus 388 ~~~----~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~ 463 (730)
T 1c4k_A 388 SFN----LFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDM 463 (730)
T ss_dssp HHH----HHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHH
T ss_pred HHH----HhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccc
Confidence 000 00111111 1122223444444433466788999999999999986348999865421
Q ss_pred ----------------------ee---E----EEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC
Q psy12303 397 ----------------------MV---N----VSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND 447 (480)
Q Consensus 397 ----------------------~~---~----v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~ 447 (480)
.+ + +++.. |. +...+. ++ .....-...+.+.|.++|+ .+... +
T Consensus 464 ~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~-pg-~~~~~g-~~-~~~g~~~~~l~~~L~e~GI-~v~~~---~ 535 (730)
T 1c4k_A 464 ANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTT-PG-INPETG-DY-EDFGVPATIVANYLRDHGI-IPEKS---D 535 (730)
T ss_dssp TTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEEC-SS-EETTTT-EE-CSSCCCHHHHHHHHHHTTC-CCSEE---C
T ss_pred cccchhhccCccchhccccccCCcccccCCeEEEEEe-CC-cccccc-cc-cccCCCHHHHHHHHHHCCc-EEEEC---C
Confidence 00 0 22221 10 000000 00 0000013456778888874 33322 2
Q ss_pred cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 448 LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 448 ~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
...+|++ ++..+|++++++++++|+++.+
T Consensus 536 -~~~ir~~-~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 536 -LNSILFL-MTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp -SSEEEEE-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEE-eCCCCCHHHHHHHHHHHHHHHH
Confidence 4689999 8999999999999999988764
No 150
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.90 E-value=1.5e-21 Score=196.60 Aligned_cols=319 Identities=13% Similarity=0.117 Sum_probs=195.6
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCc-hhH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCH-YSV 181 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h-~s~ 181 (480)
.|...+...+ +++.+++++|.+ ++++|+|||+|+..++.++.+ ||+ +++..+| .++
T Consensus 70 ~y~~~~~~~~----l~~~la~~~~~~--~~~~~~~gt~a~~~al~~l~~--------------~gd---i~~~~~~~~~~ 126 (456)
T 2ez2_A 70 AYAGSENFYH----LERTVQELFGFK--HIVPTHQGRGAENLLSQLAIK--------------PGQ---YVAGNMYFTTT 126 (456)
T ss_dssp CSSSCHHHHH----HHHHHHHHHCCS--EEEEESSHHHHHHHHHHHHCC--------------TTC---EEEESSCCHHH
T ss_pred hcccChhHHH----HHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhCC--------------CCC---Eeccccccchh
Confidence 3444444444 455678888876 599999999999999988743 556 4455677 887
Q ss_pred HHHHHHcCCCCCCeEEeeCCC----------CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCC-ccccccC---hHHHH
Q psy12303 182 RSCAAVCGLGTDNCVEVPSDK----------RGRLIPSELERLVLERKAKGDIPFFVNCTSGTT-VLGAFDP---IEEIA 247 (480)
Q Consensus 182 ~~~~~~~g~~~~~v~~v~~~~----------~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~~---l~~I~ 247 (480)
..++...|. +++.+++++ ++.+|+++|++++++... ..+++|++++++| ++|.+.+ +++|.
T Consensus 127 ~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~~i~ 201 (456)
T 2ez2_A 127 RYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMRAVR 201 (456)
T ss_dssp HHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHHHHH
T ss_pred HHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHHHHH
Confidence 888888887 778888763 268999999999987510 1248999999988 9999876 99999
Q ss_pred HHHHHcCcEEEeecccccc---------ccccccccCcc--cCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhh
Q psy12303 248 DICQKYNMWLHVDAAWGGG---------LLLSKKYRHPR--LTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCN 316 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~---------~~~~~~~~~~~--~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~ 316 (480)
++|++||+++|+|++|+.+ .......-.+. ..+ ...|++++|+||+++.| ..|+++.+++++.....
T Consensus 202 ~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~ 279 (456)
T 2ez2_A 202 ELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF-SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAK 279 (456)
T ss_dssp HHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-TTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHH
T ss_pred HHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-ccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHH
Confidence 9999999999999999874 11111100000 001 14688888899998754 46777765665544332
Q ss_pred cCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 317 QMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGF-EKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~-~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
.....+. +. .. . .+.+...+.+ +++.. .+.+ ++..++..++++++.+.|++ .|++++. |
T Consensus 280 ~~~~~~~-~~-~~------~------~~~~~~~~~a-~a~~~--~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~-p 339 (456)
T 2ez2_A 280 ELVVVYE-GM-PS------Y------GGLAGRDMEA-MAIGL--REAMQYEYIEHRVKQVRYLGDKLKA--AGVPIVE-P 339 (456)
T ss_dssp HHHHHHT-CC-TT------T------TTCCHHHHHH-HHHHH--HHHTCHHHHHHHHHHHHHHHHHHHH--TTCCBCS-S
T ss_pred HHHhhcc-Cc-cc------c------cCcchhHHHH-HHHHH--HHHhHHHHHHHHHHHHHHHHHHHhc--CCCcccc-C
Confidence 1111110 00 00 0 0100111111 12211 1233 46667778889999999998 4887654 4
Q ss_pred ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH-HhcccEEEeeeee-------------CCcccEEEEecccCC-
Q psy12303 396 EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM-MQAGTMMVGYQPL-------------NDLPNFFRNIISSAA- 460 (480)
Q Consensus 396 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~g~~~~~~~~~-------------~~~~~~~R~~~~~~~- 460 (480)
..+.+++...+.-..+.+..+ +. ...+.++| .+.|+..+..+.. .+ .+++|++ ++..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~----~~--~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~-~~~iRis-~~~~~ 411 (456)
T 2ez2_A 340 VGGHAVFLDARRFCEHLTQDE----FP--AQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPK-LETVRLT-IPRRV 411 (456)
T ss_dssp CCSSEEEEEHHHHTTTSCGGG----CH--HHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCS-CCEEEEE-CCTTT
T ss_pred CCceEEEEEhHHhcCCCChhh----cc--HHHHHHHHHHhcCeeeecccccccccCccccccccCC-CCeEEEE-eCCCC
Confidence 444444433210000111111 10 23345566 4667544332210 11 3689999 4444
Q ss_pred CCHHHHHHHHHHHHHhhcc
Q psy12303 461 VTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 461 ~t~~di~~~~~~l~~~~~~ 479 (480)
++++||++++++|++++++
T Consensus 412 ~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 412 YTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 8999999999999987653
No 151
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.90 E-value=3.6e-22 Score=196.66 Aligned_cols=217 Identities=16% Similarity=0.063 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHH----HHH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC----AAV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~----~~~ 187 (480)
....++++++++++|.+ ..+++++|++|+..++.++.. +|+ .|+++...|.+.... +..
T Consensus 59 ~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~--------------~gd-~vl~~~~~y~~~~~~~~~~~~~ 121 (389)
T 3acz_A 59 PTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQ--------------KGD-HLIAGDTLYGCTVSLFTHWLPR 121 (389)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCC--------------TTC-EEEEESSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCchHHHHHHHHHHHH
Confidence 34456677799999987 477888899999888876532 445 788888899987766 466
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.|+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+.
T Consensus 122 ~g~---~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~ 187 (389)
T 3acz_A 122 FGI---EVDLIDTS-----DVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPC 187 (389)
T ss_dssp TTC---EEEEECTT-----CHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT
T ss_pred cCC---EEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 677 78888864 899999988764 8999999999999999999999999999999999999998775
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
...+ ... ++|+++.|+||++++|.+ +|+++.++.+........... . +.
T Consensus 188 ~~~~-~~~-------~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~-~--------------------g~ 238 (389)
T 3acz_A 188 FLKP-LEL-------GADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKD-A--------------------GS 238 (389)
T ss_dssp TCCG-GGT-------TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH-H--------------------CC
T ss_pred ccCc-ccc-------CCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHh-c--------------------CC
Confidence 4222 123 789999999999998866 588887663444332211000 0 00
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~ 391 (480)
.......|+.++.+ +.+..+.++..++++.+.+.|++ .+.+.-
T Consensus 239 ~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~-~~~v~~ 281 (389)
T 3acz_A 239 LMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQ-HEKIVK 281 (389)
T ss_dssp CCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHH-CTTEEE
T ss_pred CCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHc-CCCeeE
Confidence 12334566665553 34455667777888888888888 665543
No 152
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.90 E-value=5.9e-22 Score=197.03 Aligned_cols=217 Identities=16% Similarity=0.161 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~ 187 (480)
....++++.+++++|.+ ..+++++|++|+..++.++.. ||+ .|+++...|.++...+ ..
T Consensus 114 ~~~~~l~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~~--------------~Gd-~Vi~~~~~y~~~~~~~~~~~~~ 176 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAE--STLLMASGMCASTVMLLALVP--------------AGG-HIVTTTDCYRKTRIFIETILPK 176 (445)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHSC--------------SSC-EEEEETTSCHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCchhHHHHHHHHHHH
Confidence 44456677789999986 356666777999999887643 455 7888888898877653 34
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCcc-EEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIP-FFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~-~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
.|+ ++++++.+ |+++|+++++++ + ++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+
T Consensus 177 ~G~---~v~~v~~~-----d~~~l~~ai~~~------tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~ 242 (445)
T 1qgn_A 177 MGI---TATVIDPA-----DVGALELALNQK------KVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATP 242 (445)
T ss_dssp GTC---EEEEECSS-----CHHHHHHHHHHS------CEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred cCC---EEEEeCCC-----CHHHHHHHhccC------CCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 465 78888875 899999999875 7 99999999999999999999999999999999999999876
Q ss_pred ccccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 267 LLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
....+ ... ++|+++.|+||+++++. ..|+++.++ +++..... +... .+
T Consensus 243 ~~~~~-~~~-------g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~----~~~~-----------------~g 292 (445)
T 1qgn_A 243 LNQKA-LAL-------GADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRN----LHHI-----------------LG 292 (445)
T ss_dssp TTCCT-TTT-------TCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHH----HHHH-----------------HC
T ss_pred ccCCc-ccc-------CCEEEEECCcccccccccceEEEEEECH-HHHHHHHH----HHHH-----------------hC
Confidence 54322 233 78999999999998543 278777654 44433211 0000 01
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe-EEe
Q psy12303 345 RHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF-YLI 392 (480)
Q Consensus 345 r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~-~~~ 392 (480)
.....+.+|..++. .+.+..++++..++++++.+.|++ .|++ .+.
T Consensus 293 ~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~-~p~v~~v~ 338 (445)
T 1qgn_A 293 GALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEILEA-HPKVRHVY 338 (445)
T ss_dssp CCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHT-CTTEEEEE
T ss_pred CCCCHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEE
Confidence 11234455665544 344566777888889999999999 8888 444
No 153
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.90 E-value=4e-22 Score=201.39 Aligned_cols=353 Identities=13% Similarity=0.151 Sum_probs=199.6
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhc
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKM 153 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~ 153 (480)
.|+++..+... +.+. +.+...+......|...+... ++++++++++|.+ ++++|+|||+|+..++.+++...
T Consensus 44 ~ylD~~~~~~~-~~v~-~a~~~~~~~~~~~y~~~~~~~----~l~~~la~~~~~~--~v~~t~ggt~A~~~al~~~~~~~ 115 (467)
T 1ax4_A 44 VYIDLLTDSGT-NAMS-DHQWAAMITGDEAYAGSRNYY----DLKDKAKELFNYD--YIIPAHQGRGAENILFPVLLKYK 115 (467)
T ss_dssp CSEECSCSSSC-CCEE-HHHHHHHHTCCCCSSSCHHHH----HHHHHHHHHHCCC--EEEEESSHHHHHHHHHHHHHHHH
T ss_pred eeeecccCcCC-HHHH-HHHHHHHhhcccccccCccHH----HHHHHHHHHcCCC--cEEEcCCcHHHHHHHHHHHHHhh
Confidence 47777554433 3333 322232222222344344433 4566688888874 59999999999999999987521
Q ss_pred CchhHhcCCCccCCce--EEEecCCCc-hhHHHHHHHcCCCCCCeEEeeCC----------CCCCCCHHHHHHHHHHHHH
Q psy12303 154 FPTYKEKGLSAIKGQL--VMFTSDQCH-YSVRSCAAVCGLGTDNCVEVPSD----------KRGRLIPSELERLVLERKA 220 (480)
Q Consensus 154 ~~~~~~~g~~~~~g~~--~vl~~~~~h-~s~~~~~~~~g~~~~~v~~v~~~----------~~~~~d~~~L~~~i~~~~~ 220 (480)
.. ||+. .|+++ ..| .++..++...|. .++.++.+ .++.+|+++|++++++..
T Consensus 116 ----~~------~Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~- 180 (467)
T 1ax4_A 116 ----QK------EGKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG- 180 (467)
T ss_dssp ----HH------TTCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC-
T ss_pred ----cc------CCCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHHhcC-
Confidence 00 3342 15666 455 555667777776 55555432 146799999999998631
Q ss_pred CCCccEEEEeccCCCcc-ccc---cChHHHHHHHHHcCcEEEeeccccc-cccccc-----cccCcccCCC-----CCCc
Q psy12303 221 KGDIPFFVNCTSGTTVL-GAF---DPIEEIADICQKYNMWLHVDAAWGG-GLLLSK-----KYRHPRLTGI-----ERAD 285 (480)
Q Consensus 221 ~~~~~~~v~~~~~~~~~-G~~---~~l~~I~~i~~~~~~~l~vD~a~~~-~~~~~~-----~~~~~~~~~~-----~~~D 285 (480)
..++++|++++++|++ |.+ +++++|.++|++||+++|+|++++. +..+.. .... ....+ +.+|
T Consensus 181 -~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d 258 (467)
T 1ax4_A 181 -ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA-TIKEVIFDMYKYAD 258 (467)
T ss_dssp -GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC-CHHHHHHHHGGGCS
T ss_pred -CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC-chhhhhhhhccccc
Confidence 1138999999999999 776 4578999999999999999998765 221000 0000 00000 2578
Q ss_pred cceeCccccCCCcccceEEEEeCc-hhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCc-hHHHHHHHHhcHHH
Q psy12303 286 SVTWNPHKLMGTLLQCSTIHFKQD-GLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDI-FKLWLQWRAKGDEG 363 (480)
Q Consensus 286 ~~~~s~hK~~~~p~~~g~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~-l~~~~~l~~~g~~~ 363 (480)
++++++||+++.|.| |+++.+++ ++..........+ ..... + .+..... .++..++...-.
T Consensus 259 ~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~--~~~~~------~------~~~~~~~~~a~~~~l~~~~~-- 321 (467)
T 1ax4_A 259 ALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM--EGFVT------Y------GGLAGRDMAAMVQGLEEGTE-- 321 (467)
T ss_dssp EEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH--TCSTT------T------TTCCHHHHHHHHHHHHHTTC--
T ss_pred eEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc--ccccc------c------CCccchHHHHHHHHHHHhhh--
Confidence 899999999987643 55555545 5544332111111 00000 0 0100111 111113332111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH-HhcccEEEee
Q psy12303 364 FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM-MQAGTMMVGY 442 (480)
Q Consensus 364 ~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~g~~~~~~ 442 (480)
.+.+++..++++++.+.|++ ++++++. |..+.+++............. .+. ..++.++| .+.|+.+...
T Consensus 322 -~~~~~~~~~~~~~l~~~L~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~--~~~l~~~L~~~~gv~v~~~ 391 (467)
T 1ax4_A 322 -EEYLHYRIGQVKYLGDRLRE--AGIPIQY-PTGGHAVFVDCKKLVPQIPGD----QFP--AQAVINALYLESGVRAVEI 391 (467)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH--TTCCBCS-SCCSSEEEEESTTTCTTSCGG----GCH--HHHHHHHHHHHHCEECEEE
T ss_pred -hhHHHHHHHHHHHHHHHHHh--CCCCccc-CCCceEEEEehhhhccccccC----CCC--HHHHHHHHHHhcCceeeec
Confidence 12444555778899999988 6887653 444444442211000000000 011 24566777 6777544431
Q ss_pred eee-C------C-----cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 443 QPL-N------D-----LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 443 ~~~-~------~-----~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+.. . + ..+++|++++...+|++||+++++.|+++++
T Consensus 392 g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 392 GSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp SHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred CccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 111 0 1 1379999954456899999999999998764
No 154
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.90 E-value=2.3e-21 Score=193.57 Aligned_cols=309 Identities=12% Similarity=0.033 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC-
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG- 191 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~- 191 (480)
...++++.++++++.+.++++||+|||+|+..++++++.. .+.+|. ||+.+|+.....|.+...++...|..
T Consensus 87 ~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~----~~~~g~---~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 87 PAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQY----WQAKGE---ARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHH----HHHHTC---CCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHH----hcccCC---CCCeEEEECCCCCCCchhhhhhcCCch
Confidence 3456677899999887778999999999999999987632 011121 34534444445666555454433310
Q ss_pred ---------CCCeEEeeCCC-----C-CCCCHHHHHHHHHHHHHCCCccEEEEeccC-CCccccccC----hHHHHHHHH
Q psy12303 192 ---------TDNCVEVPSDK-----R-GRLIPSELERLVLERKAKGDIPFFVNCTSG-TTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 192 ---------~~~v~~v~~~~-----~-~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~~----l~~I~~i~~ 251 (480)
...+..++.+. . +.+|+++|++++++. ...+++|+++.. +|++|.+.| +++|.++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~ 236 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICD 236 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHH
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHH
Confidence 11355666542 2 358999999999753 123778887777 789998766 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
+||+++|+|++|+++......... ...++ ..|++++ .|++++| .++|++++++ ++...........+..
T Consensus 237 ~~~~~li~De~~~~~g~~g~~~~~-~~~~~-~~d~~t~--sK~l~~G~~~iG~~~~~~-~~~~~l~~~~~~~~~~----- 306 (429)
T 1s0a_A 237 REGILLIADEIATGFGRTGKLFAC-EHAEI-APDILCL--GKALTGGTMTLSATLTTR-EVAETISNGEAGCFMH----- 306 (429)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGG-GGGTC-CCSEEEE--CGGGGTSSSCCEEEEECH-HHHHHHHTSTTSSCSC-----
T ss_pred HcCCEEEEeehhhCCcccchHHHh-hhcCC-CCCEEEe--cccccCCCccceEEEeCH-HHHHHhhcCCCccccc-----
Confidence 999999999999864322111111 11223 5677764 5988877 7899998754 4444332210000000
Q ss_pred CcccCCCCccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEe
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLW---LQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~---~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~ 404 (480)
.+++ ..+.+... ++++.+.. ++..++..++++++.+.|++ + +++..+ ++....+.+.+
T Consensus 307 -----~~t~------~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~-~~~g~~~~~~~ 370 (429)
T 1s0a_A 307 -----GPTF------MGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAP-ARDAEMVADV-RVLGAIGVVET 370 (429)
T ss_dssp -----CCTT------TTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGG-GGGCTTEEEE-EEETTEEEEEE
T ss_pred -----CCCC------CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-HhcCCCEEEE-EEeeEEEEEEE
Confidence 0001 11233333 33333211 24567778888999998887 4 566533 23333344433
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.... ..++.+.|.++|++ +.+. .+++|++ ++..+|++|+++++++|++++++
T Consensus 371 -~~~~~--------------~~~l~~~l~~~Gi~-v~~~-----~~~iRis-~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 371 -THPVN--------------MAALQKFFVEQGVW-IRPF-----GKLIYLM-PPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp -SSCBC--------------HHHHHHHHHHTTEE-CCCB-----TTEEEEC-CCTTCCHHHHHHHHHHHHHHTSS
T ss_pred -CCccc--------------HHHHHHHHHHCCCE-Eecc-----CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHh
Confidence 21110 23566777788843 3331 3699999 88889999999999999988754
No 155
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=1.7e-22 Score=202.86 Aligned_cols=317 Identities=14% Similarity=0.081 Sum_probs=193.0
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc------------
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ------------ 168 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~------------ 168 (480)
.|....+..++++++.+++.+.+|. ++.++++|+|+|+|+..++.++.. ||+
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~--------------~gd~~~~~~~~~~g~ 143 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG--------------AFVNEHSQDKESKSV 143 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE--------------EEECC-------CEE
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC--------------CCccccccccccccc
Confidence 3544555678888888888887765 567899999999999999987753 222
Q ss_pred -eEEEe-cCCCchhHHHHHH----HcCCCCCCeEEeeCCC-C----CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc
Q psy12303 169 -LVMFT-SDQCHYSVRSCAA----VCGLGTDNCVEVPSDK-R----GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL 237 (480)
Q Consensus 169 -~~vl~-~~~~h~s~~~~~~----~~g~~~~~v~~v~~~~-~----~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~ 237 (480)
..|++ ..++|..+..++. ..+.+. .++.+++++ + +.+|+++|+++++... .++++|++++++|++
T Consensus 144 ~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~npt 219 (444)
T 3if2_A 144 DKSILLPLTPEYIGYSDVHVEGQHFAAVLP-HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRPTNPT 219 (444)
T ss_dssp EEEEEESSSSCCGGGTTCCSSSCCEEECCC-EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESSCTTT
T ss_pred cceEEEeCCCCccchhhcccccchhhccCc-eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCCCCCC
Confidence 03554 3677777655431 122222 677788775 2 4799999999864321 238999999999999
Q ss_pred ccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHh
Q psy12303 238 GAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLIS 314 (480)
Q Consensus 238 G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~ 314 (480)
|.+.| +++|.++|++||+++|+|++|+.+........ ......+.++++.|+||++..+.++|+++. +..+...
T Consensus 220 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~-~~~l~~~ 296 (444)
T 3if2_A 220 GNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD--AHLNWDNNTILCFSLSKIGLPGMRTGIIVA-DAKVIEA 296 (444)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC--CCCCCCTTEEEEEESTTTTCGGGCCEEEEC-CHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc--ccccCCCCEEEEechhhccCCCCceEEEEE-CHHHHHH
Confidence 99988 88999999999999999999985432111100 111223567888999998655577888775 4444433
Q ss_pred hhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--cH--HHHHH-HHHHHHHHHHHHHHHHhcCCC--
Q psy12303 315 CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--GD--EGFEK-QIDRLMELAEYMVKKIKSMPD-- 387 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g~--~~~~~-~~~~~~~l~~~l~~~l~~~~~-- 387 (480)
.......+... ...+...++...+ +. ....+ +.++..++.+.+.+.|.+.++
T Consensus 297 ~~~~~~~~~~~---------------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 355 (444)
T 3if2_A 297 VSAMNAVVNLA---------------------PTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDY 355 (444)
T ss_dssp HHHHHHHHHSS---------------------CCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHhccCC---------------------CChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 22111100000 1122222222222 11 11122 344555566666666654234
Q ss_pred CeEEecCCceeEEEEEeecC-ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-C--------cccEEEEecc
Q psy12303 388 KFYLILEPEMVNVSFWYLPT-RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-D--------LPNFFRNIIS 457 (480)
Q Consensus 388 g~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-~--------~~~~~R~~~~ 457 (480)
++.+. .|..+.+++...+. ... ..++.+.|.+.|+.+.+...+. + ..+++|++ +
T Consensus 356 ~~~~~-~~~~g~~~~~~~~~~~~~--------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis-~ 419 (444)
T 3if2_A 356 PLMIH-KPEGAIFLWLWFKDLPIS--------------TLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMS-I 419 (444)
T ss_dssp SEEEE-CCCBSSEEEEEETTCSSC--------------HHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEE-S
T ss_pred CceEe-cCCccEEEEEEcCCCCCC--------------HHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEE-E
Confidence 56664 34445444433332 111 2456677878885443322111 1 13689999 4
Q ss_pred cCCCCHHHHHHHHHHHHHhhcc
Q psy12303 458 SAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 458 ~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+. ++++|++++++|++++++
T Consensus 420 ~~--~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 420 AA--DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp SS--CHHHHHHHHHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHHHHHHHH
Confidence 43 899999999999987654
No 156
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=7.5e-22 Score=193.20 Aligned_cols=309 Identities=12% Similarity=0.083 Sum_probs=199.9
Q ss_pred ChhhHHHHHHHHHHH-HHHhCCCCCCeEECCChhHHHHHHHHHH-HHhcCchhHhcCCCccCCceEEEecCCCchhHHHH
Q psy12303 107 APVFILMETVVLEKM-RQIIGWQGGDSILAPGGSISNLYAFLAA-RHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSC 184 (480)
Q Consensus 107 ~~~~~~~e~~~~~~l-a~~~g~~~~~~~~t~ggt~a~~~al~~~-~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~ 184 (480)
.|...++| +.+ ++++|. ...+++++|||+|+..++.++ .+ ||+ .|+++..+|+++..+
T Consensus 35 ~~~~~~l~----~~~~a~~~g~-~~~~v~~~sgt~al~~al~~l~~~--------------~Gd-~Vi~~~~~~~~~~~~ 94 (377)
T 3ju7_A 35 GPINQRFE----QTIMSGFFQN-RGAVTTVANATLGLMAAIQLKKRK--------------KGK-YALMPSFTFPATPLA 94 (377)
T ss_dssp CHHHHHHH----HHHHHHTSTT-CSEEEEESCHHHHHHHHHHHHSCT--------------TCC-EEEEESSSCTHHHHH
T ss_pred CHHHHHHH----HHHHHHHhCC-CCeEEEeCCHHHHHHHHHHHcCCC--------------CcC-EEEECCCCcHHHHHH
Confidence 44444544 447 888882 235899999999999998876 22 556 888999999999999
Q ss_pred HHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 185 AAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 185 ~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
+...|. ++++++++ +++.+|+++|++++.... .+|++|+ +++++|.+.|+++|.++|+ ||+++|+|++|
T Consensus 95 ~~~~G~---~~~~v~~~~~~~~~d~~~l~~~i~~~~---~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~ 164 (377)
T 3ju7_A 95 AIWCGL---EPYFIDISIDDWYMDKTVLWDKIEELK---EEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAP 164 (377)
T ss_dssp HHHTTC---EEEEECBCTTTCSBCHHHHHHHHHHHG---GGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTT
T ss_pred HHHcCC---EEEEEecCCccCCcCHHHHHHHHhcCC---CCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCC
Confidence 999988 88999988 468999999999984321 1267776 4567899999999999999 99999999999
Q ss_pred cccccccccccCccc-CCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 264 GGGLLLSKKYRHPRL-TGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
+.+...... .. ....+++++++++||++++ ...|++++++.++..........-. ... ++ .....
T Consensus 165 a~g~~~~~~----~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~~g~---~~~----~~--~~~~g 230 (377)
T 3ju7_A 165 GFGLMNGGM----HYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGNFGF---DTN----RE--CTMMG 230 (377)
T ss_dssp CTTCEETTE----ETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTBTTB---CTT----SC--BCSSC
T ss_pred ccCCeECCE----eccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHhcCC---CCC----Cc--eeecc
Confidence 877542211 11 1112455666678899997 4567777777665443322111000 000 00 00111
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEE-ecCCce----eE-EEEEeecCccCCCchhh
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYL-ILEPEM----VN-VSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~-~~~~~~----~~-v~f~~~~~~~~~~~~~~ 416 (480)
.+.+...+.++..+.. .+.+++..++..++++++.+.|++ ++++.+ +.++.. .. +.+. .+... +
T Consensus 231 ~~~~~~~~~aa~~~~~--l~~l~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~--- 300 (377)
T 3ju7_A 231 FNCKMSEYAAAIGIAT--MKKWDDKLKERTRISEWYKQLLQS-NGLMKKGWQLQKTEAVIQQFMPIL-CPEEV---R--- 300 (377)
T ss_dssp CBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHH-TTTTTTTCBCCCCSCBCCSSEEEE-CCTTS---C---
T ss_pred ccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcC-CCCccccccCCCCCcceEEEEEEE-eCChh---h---
Confidence 1222345555555544 567788889999999999999998 765421 111111 11 1222 12110 0
Q ss_pred HHHHhhhhhHHHHHHHHhcccEEEeee--ee------C-----C-------cccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 417 RLNILGEITPILKGRMMQAGTMMVGYQ--PL------N-----D-------LPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~~~g~~~~~~~--~~------~-----~-------~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
.+++.+.|.++|+...... +. . . ....+|++ +++.+|++||+++++.|+++
T Consensus 301 --------~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp-~~~~~t~~di~~v~~~l~~~ 371 (377)
T 3ju7_A 301 --------NKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLP-LWEGMTKEIVEQIVICLGQK 371 (377)
T ss_dssp --------HHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHTC-
T ss_pred --------HHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECC-CCCCCCHHHHHHHHHHHHHH
Confidence 2467788888885422111 00 0 0 03689999 89999999999999999887
Q ss_pred hc
Q psy12303 477 GH 478 (480)
Q Consensus 477 ~~ 478 (480)
+.
T Consensus 372 ~~ 373 (377)
T 3ju7_A 372 VV 373 (377)
T ss_dssp --
T ss_pred Hh
Confidence 64
No 157
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.89 E-value=1.9e-22 Score=199.41 Aligned_cols=339 Identities=10% Similarity=-0.013 Sum_probs=210.9
Q ss_pred CCCCCccccccCCCChHHhHHHHHHH-HcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCC--CeEECCChhHHHH
Q psy12303 70 TGHPMFMNQLSCGLDVVSMAGEWLIA-TANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGG--DSILAPGGSISNL 143 (480)
Q Consensus 70 ~~~p~~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~--~~~~t~ggt~a~~ 143 (480)
.+...|++....++.++.+. +.+.. .+.. ....|....+..++.+++.+++....+. +++ ++++|+|||+|+.
T Consensus 31 l~~g~y~d~~~~~~~~~~v~-~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~ 109 (397)
T 3fsl_A 31 LSIGLYYNEDGIIPQLQAVA-EAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALK 109 (397)
T ss_dssp CSSCCCCCTTSCCCCCHHHH-HHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHH
T ss_pred EeeeEEECCCCCccCcHHHH-HHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHH
Confidence 34444544433444445555 44444 4443 3344554555667777766666544332 455 7899999999999
Q ss_pred HHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCCCCHHHHHHHHHHHHHC
Q psy12303 144 YAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGRLIPSELERLVLERKAK 221 (480)
Q Consensus 144 ~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~ 221 (480)
.++...... .||+ .|+++.++|.++...++..|. +++.+|. ++++.+|+++|++++++.
T Consensus 110 ~~~~~~~~~------------~~gd-~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 170 (397)
T 3fsl_A 110 VGADFLKRY------------FPES-GVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL--- 170 (397)
T ss_dssp HHHHHHHHH------------CTTC-CEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHHHHHHHHTTC---
T ss_pred HHHHHHHhc------------CCCC-eEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHHHHHHHHHhC---
Confidence 996543221 0445 788888999999999999988 8889998 457889999999999742
Q ss_pred CCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccccccCc--ccCCCCCCccceeCccccCC
Q psy12303 222 GDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHP--RLTGIERADSVTWNPHKLMG 296 (480)
Q Consensus 222 ~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~s~hK~~~ 296 (480)
..+++++++++++||||.+.+ +++|.++|++||+++|+|++|+.+.........+ .+.+.....+++.|++|.++
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 250 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS 250 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc
Confidence 123789999999999999954 6699999999999999999998876531100000 11112244577789999998
Q ss_pred C-cccceEEEE--eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc--------HHHHH
Q psy12303 297 T-LLQCSTIHF--KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--------DEGFE 365 (480)
Q Consensus 297 ~-p~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--------~~~~~ 365 (480)
. +.++|++++ .+...+.........+..... . + ...+...+....+. .+.++
T Consensus 251 ~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~--~---~~~~~~~~~~~~l~~~~l~~~~~~~~~ 313 (397)
T 3fsl_A 251 LYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY------------S--S---PPNFGAQVVAAVLNDEALKASWLKEVE 313 (397)
T ss_dssp CGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT------------S--S---CCSHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc------------C--C---CCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4 466888875 343433322111000000000 0 0 11222222222221 45577
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC---CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEee
Q psy12303 366 KQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGY 442 (480)
Q Consensus 366 ~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~ 442 (480)
++.++..++++++.+.|++ .+ ++++. .|..+.++|... . ...+...+.+.| +++.+
T Consensus 314 ~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~~~~~~~~~~~~----~--------------~~~~~~~l~~~g-i~v~~ 372 (397)
T 3fsl_A 314 EMRTRILAMRQELVKVLST-EMPERNFDYL-LNQRGMFSYTGL----S--------------AAQVDRLREEFG-VYLIA 372 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HCTTSCCTHH-HHCCSSEEECCC----C--------------HHHHHHHHHTTC-EECCT
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCCCceee-cCCceEEEecCC----C--------------HHHHHHHHHhCC-EEECC
Confidence 8888899999999999998 54 56653 455555555211 1 123445566677 44433
Q ss_pred eeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 443 QPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 443 ~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+ + |+++. . .++++|++++++|+++
T Consensus 373 ----g--~--Ris~~-~-~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 373 ----S--G--RMCVA-G-LNTANVQRVAKAFAAV 396 (397)
T ss_dssp ----T--C--EEEGG-G-CCTTTHHHHHHHHHHH
T ss_pred ----C--C--eEEEE-e-cCHhhHHHHHHHHHhh
Confidence 2 2 99853 2 3567799999999875
No 158
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.89 E-value=1.4e-21 Score=196.43 Aligned_cols=314 Identities=11% Similarity=-0.013 Sum_probs=198.0
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhH
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSV 181 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~ 181 (480)
..|...++..++++++.+++..-++.+++++++|+|+++++..+ .+... ||+ .|+++.++|.++
T Consensus 105 ~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~--------------~gd-~Vl~~~p~~~~~ 168 (449)
T 3qgu_A 105 SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFG--------------SKP-TVAVQDPSYPVY 168 (449)
T ss_dssp CCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHC--------------SSS-CEEEEESCCTHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhC--------------CCC-EEEEcCCCChhH
Confidence 34544445566776666665511144667899999999998877 44433 445 788889999999
Q ss_pred HHHHHHcCCCC-------CCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHH
Q psy12303 182 RSCAAVCGLGT-------DNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADI 249 (480)
Q Consensus 182 ~~~~~~~g~~~-------~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i 249 (480)
..++...|..+ .+++.+|++++ ...|++++ .++++|++++++||+|.+.+ +++|+++
T Consensus 169 ~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l 237 (449)
T 3qgu_A 169 VDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQLTELVNF 237 (449)
T ss_dssp HHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred HHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 99999998720 01888998764 34444321 23789999999999999976 7888889
Q ss_pred HHHcCcEEEeeccccccccccccc-cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHh-hhcCCccccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKY-RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLIS-CNQMSAEYLFMQ 326 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~-~~~~~~~~l~~~ 326 (480)
|++||+++++|++|+++....... ....+.+..+.++++.+++|+++ .+.++|+++.++. .+.. .......+....
T Consensus 238 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~ 316 (449)
T 3qgu_A 238 ARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA-LKYANGEPVHADWNRVM 316 (449)
T ss_dssp HHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT-CBCTTSCBHHHHHHHHH
T ss_pred HHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH-HHhhhhhhHHHHHHHHh
Confidence 999999999999999865432110 00011222355788899999997 5577899887543 2211 000000000000
Q ss_pred ccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEE
Q psy12303 327 DKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~ 403 (480)
.. .......+...++...+ +.+.++++.++..++++++.+.|++ . |+++.. +..+.+++.
T Consensus 317 ~~--------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-~~~~~~~~~ 379 (449)
T 3qgu_A 317 TT--------------CFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE-M-GFSVYG-GDDAPYIWV 379 (449)
T ss_dssp HH--------------SCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEE-SSSSSEEEE
T ss_pred hc--------------ccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeeC-CCCeeEEEE
Confidence 00 00002333444444444 3356788889999999999999999 4 888764 443444443
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+ ... ..++.+.|.++ |+ ++.++...+ ..+++|+++ ..++++|++++++|++++++
T Consensus 380 ~~~-~~~--------------~~~~~~~l~~~~gI-~v~pg~~f~~~~~~~iRis~---~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 380 GFP-GKP--------------SWDVFAEILERCNI-VTTPGSGYGPAGEGFVRASA---FGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp ECT-TSC--------------HHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEEC---CSCHHHHHHHHHHHHHHHC-
T ss_pred ECC-CCC--------------HHHHHHHHHHHCCE-EEecchHhCCCCCCeEEEEe---cCCHHHHHHHHHHHHHHHHh
Confidence 333 111 23566677766 64 444332221 157999993 34899999999999998753
No 159
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.89 E-value=3.3e-22 Score=197.80 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH----
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV---- 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~---- 187 (480)
....++++++++++|.+ .+++++||++|+..++.++.. ||+ .|+++...|.+....+..
T Consensus 81 p~~~~l~~~la~~~g~~--~~~~~~sG~~Ai~~al~~l~~--------------~Gd-~Vi~~~~~y~~~~~~~~~~~~~ 143 (414)
T 3ndn_A 81 PTVSVFEERLRLIEGAP--AAFATASGMAAVFTSLGALLG--------------AGD-RLVAARSLFGSCFVVCSEILPR 143 (414)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCC--------------TTC-EEEEESCCCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHhC--------------CCC-EEEEcCCccchHHHHHHHHHHH
Confidence 34456677799999975 489999999999888876643 556 788888899887776654
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
+|. +++++|.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+.
T Consensus 144 ~g~---~~~~v~~~-----d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~ 209 (414)
T 3ndn_A 144 WGV---QTVFVDGD-----DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPL 209 (414)
T ss_dssp TTC---EEEEECTT-----CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHH
T ss_pred cCc---EEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccc
Confidence 676 78888876 899999998764 8899999999999999999999999999999999999998665
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
...+. .. ++|+++.|++|+++++. ..|+++.++........... .. .+.
T Consensus 210 ~~~~~-~~-------g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~-~~--------------------~g~ 260 (414)
T 3ndn_A 210 LQQGF-PL-------GVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM-RH--------------------TGP 260 (414)
T ss_dssp HCCCG-GG-------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHH-HH--------------------HCC
T ss_pred cCCch-hc-------CCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHH-HH--------------------cCC
Confidence 43322 33 68999999999998643 26777765432221211000 00 011
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
......+|+.++. .+.+..+.++..++++++.+.|++ .|++..+..|
T Consensus 261 ~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~-~p~v~~v~~p 307 (414)
T 3ndn_A 261 AMSAFNAWVLLKG--LETLAIRVQHSNASAQRIAEFLNG-HPSVRWVRYP 307 (414)
T ss_dssp CCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHT-CTTEEEEECT
T ss_pred CCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CCCEeEEECC
Confidence 1345566666654 455677788889999999999999 8888655433
No 160
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.89 E-value=1.9e-21 Score=192.16 Aligned_cols=285 Identities=12% Similarity=0.114 Sum_probs=190.1
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH----HcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA----VCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~----~~g~ 190 (480)
+++++.+++++|.+. .++++||++|+..++.+... ||+ .|+++...|.+....+. ..|+
T Consensus 85 ~~le~~lA~l~g~~~--~i~~ssGt~Ai~~al~~l~~--------------~Gd-~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 85 FSLQQAMCELEGGAG--CVLFPCGAAAVANSILAFIE--------------QGD-HVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp HHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHTTCC--------------TTC-EEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred HHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCchHHHHHHHHHHHHcCc
Confidence 445566888899863 67789999999988876532 556 78888889988876653 2355
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH--cCcEEEeecccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK--YNMWLHVDAAWGGGLL 268 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~--~~~~l~vD~a~~~~~~ 268 (480)
++.+++.+ |+++|+++|+++ |++|++++++|++|.+.|+++|+++|++ +|+++|+|++|+.+..
T Consensus 148 ---~v~~v~~~-----d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~ 213 (415)
T 2fq6_A 148 ---TTSWFDPL-----IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL 213 (415)
T ss_dssp ---EEEEECTT-----CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS
T ss_pred ---EEEEECCC-----CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc
Confidence 77888765 889999998765 8999999999999999999999999999 9999999999987643
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
..+ ... ++|+++.|+||+++++.+ .|+++.++ ..+...... ... .+..
T Consensus 214 ~~p-~~~-------g~Div~~S~sK~lg~~g~~~~G~l~~~~-~~~~~l~~~----~~~-----------------~G~~ 263 (415)
T 2fq6_A 214 FKA-LDF-------GIDVSIQAATKYLVGHSDAMIGTAVCNA-RCWEQLREN----AYL-----------------MGQM 263 (415)
T ss_dssp SCG-GGG-------TCSEEEEETTTTTTCSSSCCCEEEEECT-TTHHHHHHH----HHH-----------------TTCC
T ss_pred CCc-ccc-------CCeEEEEeCccccCCCCCceEEEEEeCH-HHHHHHHHH----HHh-----------------cCCC
Confidence 222 133 789999999999997654 57777654 343332210 000 0111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----------------ceeEEEEEeecCcc
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP-----------------EMVNVSFWYLPTRV 409 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~-----------------~~~~v~f~~~~~~~ 409 (480)
.....+|..++. .+.+..+.++..+++..+.+.|++ .|.+.-+..| ..++++|.+... .
T Consensus 264 ~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~-~ 339 (415)
T 2fq6_A 264 VDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAE-HPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKK-L 339 (415)
T ss_dssp CCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC-C
T ss_pred CCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCC-C
Confidence 223445555443 456677788888999999999999 7776533222 245666654311 0
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHH------hccc---EEEe--e---ee-----eCCc-ccEEEEecccCCCCHHHHHHH
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMM------QAGT---MMVG--Y---QP-----LNDL-PNFFRNIISSAAVTEGDIDFL 469 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~------~~g~---~~~~--~---~~-----~~~~-~~~~R~~~~~~~~t~~di~~~ 469 (480)
+..+ ...+...+. ..|. +... + +. ..+. .+.+|+| ....+++++|+.+
T Consensus 340 ---~~~~--------~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS-~G~e~~~d~i~~l 407 (415)
T 2fq6_A 340 ---NNEE--------LANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLH-IGLEDVDDLIADL 407 (415)
T ss_dssp ---CHHH--------HHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEE-CCSSCHHHHHHHH
T ss_pred ---CHHH--------HHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEE-ecCCCHHHHHHHH
Confidence 0000 112222221 1121 1111 1 00 0121 4799999 8889999999999
Q ss_pred HHHHHHh
Q psy12303 470 LTEMDRL 476 (480)
Q Consensus 470 ~~~l~~~ 476 (480)
.++|+++
T Consensus 408 ~~al~~~ 414 (415)
T 2fq6_A 408 DAGFARI 414 (415)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999764
No 161
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.89 E-value=5.7e-22 Score=196.57 Aligned_cols=231 Identities=15% Similarity=0.080 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHH----HHHHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRS----CAAVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~----~~~~~g 189 (480)
..++++++++++|.+. .+++++|++|+..++.++.. ||+ .|+++...|.+... .+...|
T Consensus 84 ~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al~~--------------~Gd-~Vi~~~~~y~~~~~~~~~~~~~~G 146 (430)
T 3ri6_A 84 VEDLEQRLKNLTGALG--VLALGSGMAAISTAILTLAR--------------AGD-SVVTTDRLFGHTLSLFQKTLPSFG 146 (430)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCC--------------TTC-EEEEETTCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhC--------------CCC-EEEEcCCCchhHHHHHHHHHHHcC
Confidence 3445566888999865 77888899999999887743 556 78888899988877 556677
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+...
T Consensus 147 ~---~~~~v~~~-----d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~ 212 (430)
T 3ri6_A 147 I---EVRFVDVM-----DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL 212 (430)
T ss_dssp C---EEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC
T ss_pred C---EEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 7 78888876 899999999765 999999999999999999999999999999999999999977652
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHh---------hhcCCcccccccccccCcccCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLIS---------CNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
. .... ++|+++.|++|++++|. -.|+++.+....+.. ... ...++..... .
T Consensus 213 ~-~~~~-------g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~~~---------~ 274 (430)
T 3ri6_A 213 E-AKRL-------GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKARK---------E 274 (430)
T ss_dssp C-GGGG-------TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHHHH---------T
T ss_pred C-hHHc-------CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHHHH---------H
Confidence 2 2233 78999999999998752 345544433321100 000 0000000000 0
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
+....+.......+|+.++ |.+.+..++++..+++.++.+.|++ .|+++.+..|.
T Consensus 275 ~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~-~p~v~~V~~P~ 329 (430)
T 3ri6_A 275 VFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLS-IPQVKCVNHPS 329 (430)
T ss_dssp HHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECTT
T ss_pred HHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhC-CCCccEEECCC
Confidence 0000122235566676655 4677888889999999999999999 89988655444
No 162
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.89 E-value=4.8e-22 Score=199.44 Aligned_cols=307 Identities=12% Similarity=0.031 Sum_probs=190.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchh-HHHH--H
Q psy12303 109 VFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYS-VRSC--A 185 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s-~~~~--~ 185 (480)
....+|...++++++++|.+. ..++++|||+||..++.++++ ||+ .|+++..+|.+ +... .
T Consensus 88 ~~~~~e~~a~~~la~~~g~~~-~~v~~~sGs~a~~~a~~~~~~--------------~Gd-~Vl~~~~~~~~~~~~~~~~ 151 (447)
T 3h7f_A 88 HVDVVENLARDRAKALFGAEF-ANVQPHSGAQANAAVLHALMS--------------PGE-RLLGLDLANGGHLTHGMRL 151 (447)
T ss_dssp HHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHCC--------------TTC-EEEEECGGGTCCGGGTCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHHhcC--------------CCC-EEEecCcccccccchhhhh
Confidence 334555544499999999976 233388899999999888754 556 78888878766 2111 1
Q ss_pred HHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 186 AVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 186 ~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|... .++.++++ +++.+|+++|++++++. ++++|+++.++++++. ++++|.++|++||+++|+|++|+
T Consensus 152 ~~~g~~~-~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~ 223 (447)
T 3h7f_A 152 NFSGKLY-ENGFYGVDPATHLIDMDAVRATALEF-----RPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHF 223 (447)
T ss_dssp SHHHHSS-EEEEECCCTTTCSCCHHHHHHHHHHH-----CCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTT
T ss_pred hhcCCee-EEEEcCcCcccCCcCHHHHHHHHHhc-----CCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCch
Confidence 1222211 44566666 46789999999999754 1678888888887766 99999999999999999999987
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCC
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCG 344 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 344 (480)
.+......... . ++.+|+++.++||++++|.+ |+++.++ ++.........++..+ +
T Consensus 224 ~g~~~~g~~~~-~---~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~~~~~~------------------~ 279 (447)
T 3h7f_A 224 AGLVAAGLHPS-P---VPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAKAINSAVFPGQQG------------------G 279 (447)
T ss_dssp HHHHHTTSSCC-S---TTTCSEEEEESSGGGCCCSC-EEEEECG-GGHHHHHHHHTTTTCS------------------S
T ss_pred hhhhcCCCCCC-C---CCCCcEEEecCCcCCCCCCe-EEEEECH-HHHHHHhhhcCCcccC------------------C
Confidence 65443222111 1 13679999999999987655 7776543 4433322111111100 0
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEecCC-ceeEEEEEeecCccCCCchhhHH
Q psy12303 345 RH-NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP----DKFYLILEP-EMVNVSFWYLPTRVRNMPHEKRL 418 (480)
Q Consensus 345 r~-~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~----~g~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~ 418 (480)
.. ....++.+++.....++++++.++..++++++.+.|.+ . +|++++..+ ....+.+.+.+....
T Consensus 280 ~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 350 (447)
T 3h7f_A 280 PLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMA-PDVAKAGVSVVSGGTDVHLVLVDLRDSPLD-------- 350 (447)
T ss_dssp CCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTS-HHHHHTTCEEGGGSCSSSEEEEECTTSSCC--------
T ss_pred ccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHh-ccccCCCeEEecCCCCCCEEEEEcCCCCCC--------
Confidence 00 11233444444444456788889999999999999988 4 489887533 333333333222111
Q ss_pred HHhhhhhHHHHHHHHhcccEEEe---ee--eeCCcccEEEEeccc---CCCCHHHHHHHHHHHHHhhc
Q psy12303 419 NILGEITPILKGRMMQAGTMMVG---YQ--PLNDLPNFFRNIISS---AAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 419 ~~l~~~~~~i~~~l~~~g~~~~~---~~--~~~~~~~~~R~~~~~---~~~t~~di~~~~~~l~~~~~ 478 (480)
...+.+.|.+.|+++.. +. .......++|++... ...+++||+++++.|+++++
T Consensus 351 ------~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~ 412 (447)
T 3h7f_A 351 ------GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALA 412 (447)
T ss_dssp ------HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 12344555555744320 11 001114689998322 23689999999999998764
No 163
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=9.1e-22 Score=192.92 Aligned_cols=289 Identities=12% Similarity=0.084 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC-chhHHHHHHHcCCC-
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC-HYSVRSCAAVCGLG- 191 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~-h~s~~~~~~~~g~~- 191 (480)
..++++++++++|.+ .++++|+|||+|+..++.+++.. ...+ .||+..|+++..+ |.+...+....+..
T Consensus 72 ~~~l~~~la~~~g~~-~~v~~~~g~t~a~~~~~~~~~~~-----~~~~---~~g~~~vl~~~~~y~~~~~~~~~~~~~~~ 142 (375)
T 2eh6_A 72 QEELAHKLVKHFWTE-GKVFFANSGTESVEAAIKLARKY-----WRDK---GKNKWKFISFENSFHGRTYGSLSATGQPK 142 (375)
T ss_dssp HHHHHHHHHHTSSSC-EEEEEESSHHHHHHHHHHHHHHH-----HHHT---TCCCCEEEEEBTCCCCSSHHHHHHCBCGG
T ss_pred HHHHHHHHHhhcCCC-CeEEEeCchHHHHHHHHHHHHHH-----hccC---CCCCCEEEEECCCcCCCchhhhhhcCCcc
Confidence 346678899999984 57999999999999999875321 0000 1442256666665 54444444433321
Q ss_pred ----C----CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEe
Q psy12303 192 ----T----DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHV 259 (480)
Q Consensus 192 ----~----~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~v 259 (480)
. ..+..+|. .|+++|+++++++ +++|++++++|++|.+.| +++|.++|++||+++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~ 211 (375)
T 2eh6_A 143 FHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLII 211 (375)
T ss_dssp GTTTTCSCCSSEEEECT-----TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCCCCCCceeCCC-----chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEE
Confidence 0 01444443 4899999988753 899999999999999987 99999999999999999
Q ss_pred eccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 260 DAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 260 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
|++|+++......... ...+. .+|++++| |++++|.++|++++++ +..+.... ... . ..+
T Consensus 212 De~~~~~~~~~~~~~~-~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~-~~~~~~~~---~~~-~-----------~~~ 271 (375)
T 2eh6_A 212 DEVQTGIGRTGEFYAY-QHFNL-KPDVIALA--KGLGGGVPIGAILARE-EVAQSFTP---GSH-G-----------STF 271 (375)
T ss_dssp ECTTTTTTTTSSSSGG-GGGTC-CCSEEEEC--GGGGTTSCCEEEEEEH-HHHTTCCT---TSC-C-----------CSS
T ss_pred eccccCCCCCCcchhh-hhcCC-CCCEEEEc--ccccCCCCeEEEEEcH-HHHhhhcC---CCC-C-----------CCC
Confidence 9999953221111111 11122 47888766 8888888899999865 33332211 000 0 000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHH
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLN 419 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 419 (480)
....+...+++..+. .+.+..++..++++++.+.|++ .+...+ ++....+.+.+ +..
T Consensus 272 ------~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~-~~~~~~--~~~g~~~~~~~-~~~----------- 328 (375)
T 2eh6_A 272 ------GGNPLACRAGTVVVD--EVEKLLPHVREVGNYFKEKLKE-LGKGKV--KGRGLMLGLEL-ERE----------- 328 (375)
T ss_dssp ------TTCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-TTSSEE--EEETTEEEEEC-SSC-----------
T ss_pred ------CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-HhcCCc--eEEEEEEEEEE-cCc-----------
Confidence 012333333333221 1226778888999999999998 654222 23333444432 211
Q ss_pred HhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 420 ILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 420 ~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.|.+.|+.+ .+. + .+++|++ ++..++++|+++++++|+++
T Consensus 329 -----~~~~~~~l~~~gi~~-~~~---~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 329 -----CKDYVLKALEKGLLI-NCT---A-GKVLRFL-PPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp -----CHHHHHHHHHTTEEC-EEE---T-TTEEEEC-CCTTCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHCCCEE-ecC---C-CCEEEEE-CCCCCCHHHHHHHHHHHHHh
Confidence 135667777777443 332 2 4799999 77789999999999999876
No 164
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.89 E-value=9.3e-22 Score=191.00 Aligned_cols=281 Identities=9% Similarity=0.016 Sum_probs=194.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCe
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNC 195 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v 195 (480)
++++++++++|.++.++++|+|+|+|+..++.++. |+ .|+++.++|.++...++..|. ++
T Consensus 54 ~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~----------------gd-~Vi~~~p~~~~~~~~~~~~g~---~~ 113 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR----------------GS-RSLIAIPSFAEYEDACRMYEH---EV 113 (350)
T ss_dssp HHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT----------------TC-EEEEEESCCHHHHHHHHHTTC---EE
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC----------------CC-EEEEeCCCcHHHHHHHHHcCC---eE
Confidence 57788999999988899999999999998887663 14 788888999999999999998 88
Q ss_pred EEeeC-CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC-cEEEeeccccccccccccc
Q psy12303 196 VEVPS-DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN-MWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 196 ~~v~~-~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~-~~l~vD~a~~~~~~~~~~~ 273 (480)
+.+|. +++..+++ + ++++|++++++||+|.+.|++++.++++.++ .++++|++|+.+.......
T Consensus 114 ~~v~~~~~~~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~ 179 (350)
T 3fkd_A 114 CFYPSNEDIGEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR 179 (350)
T ss_dssp EEEETTSCGGGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCC
T ss_pred EEEecCCccccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchh
Confidence 99998 65444554 2 2789999999999999999999999999886 7999999998765422211
Q ss_pred cCcccCCCCCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHH
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKL 352 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 352 (480)
.. ... ..+.++++.|++|+++ .+.++|++++ ++++..........+ ....+..
T Consensus 180 ~~-~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------------~~~~~~~ 233 (350)
T 3fkd_A 180 PA-DIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW-----------------------AVNALAI 233 (350)
T ss_dssp GG-GGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT-----------------------CSCHHHH
T ss_pred hH-Hhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCC-----------------------CCCHHHH
Confidence 11 111 1245578889999998 4467898887 555555443222111 0123333
Q ss_pred HHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHH
Q psy12303 353 WLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGR 431 (480)
Q Consensus 353 ~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 431 (480)
+++...+.. +.+.+.+++..++++++.+.|++ +|++++. ++....+.+.+ +.. . ..++.+.
T Consensus 234 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~~~~~~~~~-~~~-~--------------~~~l~~~ 295 (350)
T 3fkd_A 234 EAAKFILIHPAQFTLPIRKWQRNTVDFITALNR-LDGVEVH-PSGTTFFLLRL-KKG-T--------------AAELKKY 295 (350)
T ss_dssp HHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHH-STTEEEC-CCSSSEEEEEE-SSS-C--------------HHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEC-CCCCcEEEEEC-CCC-C--------------HHHHHHH
Confidence 433333311 11333444555889999999999 8899984 45544444433 221 1 2456788
Q ss_pred HHh-cccEEEeeeee-CCc-ccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 432 MMQ-AGTMMVGYQPL-NDL-PNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 432 l~~-~g~~~~~~~~~-~~~-~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
|.+ .|+. +.++.. .+. .+++|+++ . +++++++++++|+++.++
T Consensus 296 L~~~~gi~-v~~g~~f~~~~~~~iRis~-~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 296 MLEEYNML-IRDASNFRGLDESYVRITT-Q---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp HHHTTCEE-CEECTTSTTCCTTEEEEEC-C---CHHHHHHHHHHHHHHHTC
T ss_pred HHHHCCEE-EEeCccCCCCCCCEEEEEc-C---CHHHHHHHHHHHHHHHHH
Confidence 888 7744 443322 111 57999994 3 789999999999988754
No 165
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.89 E-value=6.4e-22 Score=197.85 Aligned_cols=305 Identities=10% Similarity=-0.021 Sum_probs=198.0
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.|.......++++++.+|+.+.++.++.++++|+|+++++.. +..+.+ ||+ .|+++.+.|+++.
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~--------------~gd-~Vl~~~p~y~~~~ 156 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFG--------------SNV-TIAVQDPSYPAYV 156 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHC--------------TTC-CEEEEESCCTHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcC--------------CCC-EEEEeCCCCHHHH
Confidence 444445567888888888776567777899999999998875 444432 445 7888899999999
Q ss_pred HHHHHcCCCC---------CCeEEeeCCCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHH
Q psy12303 183 SCAAVCGLGT---------DNCVEVPSDKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIAD 248 (480)
Q Consensus 183 ~~~~~~g~~~---------~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~ 248 (480)
.++...|... .+++.+|++.+ ...|++. ..++++|++++++||+|.+.+ +++|++
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 225 (432)
T 3ei9_A 157 DSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLTQLVE 225 (432)
T ss_dssp HHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 9999888532 26788888753 3444322 123788999999999999865 677777
Q ss_pred HHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCC-CcccceEEEEeCchh-------hHhhhcCCc
Q psy12303 249 ICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHFKQDGL-------LISCNQMSA 320 (480)
Q Consensus 249 i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~-------~~~~~~~~~ 320 (480)
+|++||+++++|++|+.+...........+.+..+.++++.|++|+++ .+.++|++++++... ........
T Consensus 226 la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~- 304 (432)
T 3ei9_A 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRII- 304 (432)
T ss_dssp HHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHH-
T ss_pred HHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHh-
Confidence 899999999999999986543211111012222345688889999997 556789988765431 22111000
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCce
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK---GDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEM 397 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~---g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~ 397 (480)
... ......+...+++..+ +.+.++++.++..++++++.+.|++ . |+++..+...
T Consensus 305 ~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~ 362 (432)
T 3ei9_A 305 CTC--------------------FNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS-L-GYDVYGGKNA 362 (432)
T ss_dssp HHS--------------------CCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCEEECSSS
T ss_pred ccc--------------------cCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH-C-CceecCCCcc
Confidence 000 0001233444444433 3456788889999999999999999 5 8887643333
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
. +++...+ .. + ..++...+.++ |+ ++.++...+ ..+++|+++ .+++++|++++++|+
T Consensus 363 ~-~~~~~~~-~~---~-----------~~~~~~~ll~~~gv-~v~~g~~f~~~~~~~iRis~---~~~~e~l~~~l~rl~ 422 (432)
T 3ei9_A 363 P-YVWVHFP-NQ---S-----------SWDVFAEILEKTHV-VTTPGSGFGPGGEGFVRVSA---FGHRENILEACRRFK 422 (432)
T ss_dssp S-EEEEECT-TS---C-----------HHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEEC---CSCHHHHHHHHHHHH
T ss_pred e-EEEEECC-CC---C-----------HHHHHHHHHHHCCE-EEeCchHhCCCCCCEEEEEe---cCCHHHHHHHHHHHH
Confidence 3 3332222 11 1 23455666655 64 444332221 157999993 458999999999998
Q ss_pred Hhh
Q psy12303 475 RLG 477 (480)
Q Consensus 475 ~~~ 477 (480)
+.-
T Consensus 423 ~~~ 425 (432)
T 3ei9_A 423 QLY 425 (432)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 166
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=6.2e-21 Score=188.37 Aligned_cols=301 Identities=13% Similarity=0.028 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++++++++++|. .++++|+|||+|+..++++++... ...|. +++.+|+.+...|.+...+....+.
T Consensus 77 ~~~~~~l~~~la~~~~~--~~v~~~~gg~ea~~~al~~~~~~~----~~~g~---~~~~vi~~~~~yhg~~~~~~~~~~~ 147 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL--ERVFFTNSGTESIEGAMKTARKYA----FNKGV---KGGQFIAFKHSFHGRTLGALSLTAN 147 (395)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCEEEEETTCCCCSSHHHHTTCCC
T ss_pred CHHHHHHHHHHHHhcCC--CeEEEeCCHHHHHHHHHHHHHHHh----hccCC---CCCEEEEEcCCcCCCCHHHHhhcCC
Confidence 45667788889999984 469999999999999999887531 11221 2353555555555554444333221
Q ss_pred ---------CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEE
Q psy12303 191 ---------GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWL 257 (480)
Q Consensus 191 ---------~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l 257 (480)
-...+..+|.+ |+++|++++++. +++|+++..++++|.+.+ +++|.++|++||+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 216 (395)
T 3nx3_A 148 EKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILL 216 (395)
T ss_dssp HHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEE
T ss_pred cccccccCCCCCCcEEeCCC-----CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 01256666654 799999998744 889999999999999977 999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchh-hHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGL-LISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
|+|++|+++......... ...++ ..|++++ .|.++++.++|+++.++ +. .+..... ...
T Consensus 217 i~Dev~~~~g~~g~~~~~-~~~~~-~~d~~t~--sK~~~~G~~~G~~~~~~-~~~~~~~~~~----~~~----------- 276 (395)
T 3nx3_A 217 IADEIQCGMGRSGKFFAY-EHAQI-LPDIMTS--AKALGCGLSVGAFVINQ-KVASNSLEAG----DHG----------- 276 (395)
T ss_dssp EEECTTTTTTTTSSSSGG-GGGTC-CCSEEEE--CGGGTTTSCCEEEEECH-HHHHHHSCTT----CCS-----------
T ss_pred EEEecccCCCcCCcchhH-HhcCC-CCCEEEe--cccccCCCceEEEEEch-hhhhhhcCCc----ccC-----------
Confidence 999999865332221111 12233 4677764 58888778899888754 34 3332111 000
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEecCCceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK----SMPDKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~----~~~~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
.+.....+...+++..+..-.-++..++..++.+++++.|. + ++.+..+ ++....+.+.+.... .
T Consensus 277 ------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~-~-- 345 (395)
T 3nx3_A 277 ------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINE-FDFCKKR-KGLGFMQGLSLDKSV-K-- 345 (395)
T ss_dssp ------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-CTTEEEE-EEETTEEEEEECTTS-C--
T ss_pred ------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE-EeEEEEEEEEeCCcc-h--
Confidence 00012333333333332111112344455555555555444 4 4555443 233344444432110 0
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.++|+++... + .+++|++ ++..+|++|+++++++|+++++++
T Consensus 346 ------------~~~~~~~l~~~Gi~v~~~----~-~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~~ 395 (395)
T 3nx3_A 346 ------------VAKVIQKCQENALLLISC----G-ENDLRFL-PPLILQKEHIDEMSEKLRKALKSF 395 (395)
T ss_dssp ------------HHHHHHHHHHTTEECEEE----T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ------------HHHHHHHHHHCCCEEecC----C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHhC
Confidence 245677888888544332 2 5799999 889999999999999999987653
No 167
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.89 E-value=2e-21 Score=194.43 Aligned_cols=320 Identities=15% Similarity=0.094 Sum_probs=194.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDN 194 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~ 194 (480)
.++++.+++++|.+ .+++++|||+|+..++.++....+ ...+. .||+ .|+++..+|+++..++...|. +
T Consensus 65 ~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~---~~~~~--~~gd-~Vi~~~~~~~~~~~~~~~~g~---~ 133 (437)
T 3bb8_A 65 DAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKL---GVRAL--KPGD-EVITVAAGFPTTVNPTIQNGL---I 133 (437)
T ss_dssp HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGG---GGGSC--CTTC-EEEECSSSCHHHHHHHHHTTC---E
T ss_pred HHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhccc---ccccC--CCcC-EEEECCCCcHHHHHHHHHcCC---E
Confidence 44566688889987 489999999999999987631000 00000 1445 889999999999999999887 7
Q ss_pred eEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccccc
Q psy12303 195 CVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSKKY 273 (480)
Q Consensus 195 v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~ 273 (480)
++.+++++ ++.+|+++|+++++++ +++|++++ ++|...|+++|.++|+++|+++|+|++|+.+... +..
T Consensus 134 ~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~ 203 (437)
T 3bb8_A 134 PVFVDVDIPTYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGK 203 (437)
T ss_dssp EEECCEETTTTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTE
T ss_pred EEEEeccCccCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCe
Confidence 88898876 6889999999998654 88888875 4688899999999999999999999999976544 221
Q ss_pred cCcccCCCCCCccceeCccccCCCccc-ceEEEEeCchhhHhhhcCCcccccc------cc--------c---ccCccc-
Q psy12303 274 RHPRLTGIERADSVTWNPHKLMGTLLQ-CSTIHFKQDGLLISCNQMSAEYLFM------QD--------K---LYDVRY- 334 (480)
Q Consensus 274 ~~~~~~~~~~~D~~~~s~hK~~~~p~~-~g~~~~~~~~~~~~~~~~~~~~l~~------~~--------~---~~~~~~- 334 (480)
.. +. .+|+++.+++|....|.+ .|+++ .+...+.........+... .+ . .....+
T Consensus 204 ~~----~~-~~d~~~~s~~~~k~l~~g~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (437)
T 3bb8_A 204 MA----GT-FGDIGTVSFYPAKHITMGEGGAVF-TQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYD 277 (437)
T ss_dssp ET----TS-SSSEEEEECSTTSSSCCSSCEEEE-ESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCC
T ss_pred ec----cc-ccCEEEEECcCCcCCCCCCeEEEE-eCCHHHHHHHHHHHHhCccccccccccccccccccccccccccccc
Confidence 11 11 367766664333222333 35555 4433322211000001000 00 0 000000
Q ss_pred CCCCcc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC------ceeEEEEEeecC
Q psy12303 335 DTGDKV-IQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP------EMVNVSFWYLPT 407 (480)
Q Consensus 335 ~~~~~~-~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~------~~~~v~f~~~~~ 407 (480)
..++.. .....+...+.+.+++.. .+.+.+.+++.+++++++.+.|++ ++++.++... ...++.+.+..+
T Consensus 278 ~~~~~~~~g~~~~~~~~~aa~~l~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (437)
T 3bb8_A 278 HKYTYSHLGYNLKITDMQAACGLAQ--LERIEEFVEKRKANFKYLKDALQS-CADFIELPEATENSDPSWFGFPITLKED 354 (437)
T ss_dssp GGGCBCSCCCBCCCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHGGG-GTTTEECCCCCTTEECCCSSEEEEECGG
T ss_pred ccccccccCcccCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhc-cCCccccCCCCCCCceeeEEEEEEECCc
Confidence 000000 001111234444444444 344567777889999999999999 7887665321 111233322211
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee--------eC-------C--------cccEEEEecccCCCCHH
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP--------LN-------D--------LPNFFRNIISSAAVTEG 464 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~--------~~-------~--------~~~~~R~~~~~~~~t~~ 464 (480)
. +.+ ..++.+.|.++|+.+..... .. . ..+.+|++ +++.+|++
T Consensus 355 ~--~~~-----------~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~-~~~~~t~~ 420 (437)
T 3bb8_A 355 S--GVS-----------RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIG-IYPGLTHD 420 (437)
T ss_dssp G--SSC-----------HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEEC-CSTTCCHH
T ss_pred C--cCc-----------HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEec-CCCCCCHH
Confidence 0 110 23567778788854322100 00 0 02359999 99999999
Q ss_pred HHHHHHHHHHHhhc
Q psy12303 465 DIDFLLTEMDRLGH 478 (480)
Q Consensus 465 di~~~~~~l~~~~~ 478 (480)
||++++++|+++++
T Consensus 421 di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 421 HLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999998764
No 168
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.89 E-value=7.3e-21 Score=189.30 Aligned_cols=299 Identities=10% Similarity=0.053 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++++.+++++|.+ ++++++|+||++|+..++++++.. +|+.+|+.....|.+...++...|.
T Consensus 86 ~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~-------------~~~~vi~~~p~yh~~~~~~~~~~~~ 152 (419)
T 2eo5_A 86 IPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNT-------------GRKYIIAFLGGFHGRTFGSISLTAS 152 (419)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTT-------------SCCEEEEETTCCCCSSHHHHHHCCS
T ss_pred HHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHh-------------hCCcEEEECCCcCCCCHhhHhhcCC
Confidence 44566778899999987 668999999999999999988652 2353555555667666666654332
Q ss_pred C----------CCCeEEeeCCCCCC----------------CCHHHHH-HHHHHHHHCCCccEEEEeccCCCccccccC-
Q psy12303 191 G----------TDNCVEVPSDKRGR----------------LIPSELE-RLVLERKAKGDIPFFVNCTSGTTVLGAFDP- 242 (480)
Q Consensus 191 ~----------~~~v~~v~~~~~~~----------------~d~~~L~-~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~- 242 (480)
. ...++.+|.+++++ +|+++|+ +++++. ....++++|+++..++++|.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~-~~~~~~~~vi~~p~~~~tG~~~~~ 231 (419)
T 2eo5_A 153 KAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNL-VPPEEVAGIFFEPIQGEGGYVIPP 231 (419)
T ss_dssp CGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHT-CCGGGEEEEEECSSBTTTTSBCCC
T ss_pred ccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhc-cCCCCEEEEEEeCccCCCCCccCC
Confidence 1 12578888865543 3688998 888742 00013677777766677898766
Q ss_pred ---hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC
Q psy12303 243 ---IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM 318 (480)
Q Consensus 243 ---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~ 318 (480)
+++|.++|++||+++|+|++|+++......... ...++ ..|+++ +.|.++++ .++|+++.++. .. .. .
T Consensus 232 ~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~-~~~~~-~~d~~t--~sK~~~~G~~riG~~~~~~~-~~-~~-~- 303 (419)
T 2eo5_A 232 KNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAI-ENFNT-VPDVIT--LAKALGGGIMPIGATIFRKD-LD-FK-P- 303 (419)
T ss_dssp TTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG-GGGTC-CCSEEE--ECGGGGTTTSCCEEEEEEGG-GC-CC---
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhH-HhcCC-CCCEEE--ecccccCCccceEEEEEchH-hh-cC-C-
Confidence 999999999999999999999865432211111 11223 467665 56988877 88999997654 32 21 1
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCcee
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMV 398 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~ 398 (480)
... . +++ ....+...+++..+. .+++..++..+++++|.+.|.+ + +..+ ++...
T Consensus 304 --~~~-~-----------~t~------~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~-~--~~~~-~~~g~ 357 (419)
T 2eo5_A 304 --GMH-S-----------NTF------GGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQG-L--ADDV-RGIGL 357 (419)
T ss_dssp -------------------CC------CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-S--SSEE-EEETT
T ss_pred --ccc-C-----------CCC------CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-h--hhhe-EeeeE
Confidence 000 0 000 023333333333321 1223778888999999999988 5 2222 23333
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+.+.+.+.. .... +.+.|.+.|+++... + .+++|++ ++..+|++++++++++|+++++
T Consensus 358 ~~~i~~~~~~--------------~~~~-~~~~l~~~Gv~v~~~----~-~~~lRis-~~~~~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 358 AWGLEYNEKK--------------VRDR-IIGESFKRGLLLLPA----G-RSAIRVI-PPLVISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp EEEEECSCHH--------------HHHH-HHHHHHHTTEECEEE----T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCc--------------cHHH-HHHHHHHCCCEEecC----C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHH
Confidence 4444321100 0123 667777888544332 2 4699998 8888999999999999998876
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 417 ~ 417 (419)
T 2eo5_A 417 V 417 (419)
T ss_dssp H
T ss_pred h
Confidence 4
No 169
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.89 E-value=3.3e-21 Score=192.59 Aligned_cols=330 Identities=11% Similarity=0.004 Sum_probs=183.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
......+++++++++++.+..++++|+|||+|+..++++++... ...|. +++..|++.+..|+.....+..++
T Consensus 70 ~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~----~~~g~---~~~~~vi~~~~~yhg~~~~~~~~~ 142 (430)
T 3i4j_A 70 SSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYH----VERGE---PGRFKVITRVPSYHGASLGSLAAS 142 (430)
T ss_dssp EEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTC------------
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEEeCCcCCCCccccccc
Confidence 34566778899999999877789999999999999999987531 12232 222255555555444333333222
Q ss_pred CCC----------C--CeEEeeCCCC---CCCCHHHHHHHHHHHHHCCCccEEEEeccCCC-ccccccC----hHHHHHH
Q psy12303 190 LGT----------D--NCVEVPSDKR---GRLIPSELERLVLERKAKGDIPFFVNCTSGTT-VLGAFDP----IEEIADI 249 (480)
Q Consensus 190 ~~~----------~--~v~~v~~~~~---~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~~----l~~I~~i 249 (480)
... . .+..+|.+.. +..|+++|++++++.. ...+++|+++..++ ++|.+.+ +++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l 220 (430)
T 3i4j_A 143 GMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRDI 220 (430)
T ss_dssp -------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHH
T ss_pred CccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHH
Confidence 110 0 2344554432 2346789999997531 12377888888888 8998777 9999999
Q ss_pred HHHcCcEEEeeccccccccccccccCcccC-CCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPRLT-GIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
|++||+++|+|++|+++......... ... ++ ..|+++ +.|.++++ .++|+++. ++++.+........+....
T Consensus 221 ~~~~~~~li~DEv~~~~~~~g~~~~~-~~~~~~-~~di~t--~sK~l~~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~- 294 (430)
T 3i4j_A 221 CDEAGIIFIADEVMSGMGRCGSPLAL-SRWSGV-TPDIAV--LGKGLAAGYAPLAGLLA-APQVYETVMGGSGAFMHGF- 294 (430)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGG-GGTTTC-CCSEEE--ECGGGTTTSSCCEEEEE-CHHHHHHHHHTTCBCCCCC-
T ss_pred HHHcCCEEEEechhhCCCcccchhhh-hhhcCC-CCcEEE--EcccccCCccccEEEEE-CHHHHHHHhccCCcccccC-
Confidence 99999999999999876433222111 122 33 467776 45999876 77898886 4555444332111111110
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH----HhcCCCCeEEecCCceeEEEEE
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKK----IKSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~----l~~~~~g~~~~~~~~~~~v~f~ 403 (480)
+.....+...+++..+..-.-+++.++..++.+++++. +.+ ++++..+ ++....+.+.
T Consensus 295 ----------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~-~~~g~~~~~~ 356 (430)
T 3i4j_A 295 ----------------TYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQAR-FPQMMQV-RGTGLLLGVV 356 (430)
T ss_dssp ----------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-CTTEEEE-EEETTEEEEE
T ss_pred ----------------CCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE-EEEEEEEEEE
Confidence 00123333333333321100123344444444444444 445 5677654 3444455554
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeee-eeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQ-PLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~-~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+....... .... .....++.+.|.++|+++.... ...+ ..+++|++ ++...|++++++++++|++++++
T Consensus 357 ~~~~~~~~----~~~~--~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 357 LGDLATGQ----AFET--PGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLG-PPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp EC------------------CHHHHHHHHHHTTEECC-----------CEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccccccC----CCcc--HHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 43111000 0000 0012467788888885543321 1111 15689999 88889999999999999988764
No 170
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=5.9e-21 Score=189.85 Aligned_cols=240 Identities=13% Similarity=0.093 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HH
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AV 187 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~ 187 (480)
....++++.+++++|.+. .+++++||+|+..++.++.. +|+ .|+++..+|.+....+ ..
T Consensus 58 ~~~~~l~~~la~~~g~~~--~v~~~sGt~A~~~~l~~~~~--------------~gd-~vi~~~~~~~~~~~~~~~~~~~ 120 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGKA--ALATASGHAAQFLALTTLAQ--------------AGD-NIVSTPNLYGGTFNQFKVTLKR 120 (421)
T ss_dssp HHHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHCC--------------TTC-EEEECSCCCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHhCCCc--eEEecCHHHHHHHHHHHHhC--------------CCC-EEEEeCCCchHHHHHHHHHHHH
Confidence 334556677899999864 56777789999999987632 445 7889999999988776 56
Q ss_pred cCCCCCCeEEe-eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc-cc
Q psy12303 188 CGLGTDNCVEV-PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW-GG 265 (480)
Q Consensus 188 ~g~~~~~v~~v-~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~-~~ 265 (480)
.|+ +++.+ +.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++| +.
T Consensus 121 ~g~---~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~ 186 (421)
T 2ctz_A 121 LGI---EVRFTSREE-----RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMG 186 (421)
T ss_dssp TTC---EEEECCTTC-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGG
T ss_pred cCC---EEEEECCCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccc
Confidence 676 77888 664 899999998764 899999999999999999999999999999999999999 76
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeC--chh----hHhhhcCCccccccccc-ccC-cc-cC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQ--DGL----LISCNQMSAEYLFMQDK-LYD-VR-YD 335 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~--~~~----~~~~~~~~~~~l~~~~~-~~~-~~-~~ 335 (480)
+. ....... ++|+++.|+||++++|. +.|++++.+ ..+ ..........+...... ... .. ..
T Consensus 187 g~-~~~~~~~-------~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~ 258 (421)
T 2ctz_A 187 GY-LLRPLAW-------GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIV 258 (421)
T ss_dssp GT-SCCGGGG-------TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHH
T ss_pred cc-cCCcccc-------CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHH
Confidence 53 2222223 68999999999999875 477777763 222 12221111111100000 000 00 00
Q ss_pred -CC-CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec
Q psy12303 336 -TG-DKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL 393 (480)
Q Consensus 336 -~~-~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~ 393 (480)
.. ......+.....+.+|+.+.. .+.+..++++..++++++.+.|++ +|+++.+.
T Consensus 259 ~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~-~p~v~~v~ 315 (421)
T 2ctz_A 259 KARVDGLRDQGQALGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLE-QPQVAWVN 315 (421)
T ss_dssp HHHHTHHHHHCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHT-CTTEEEEE
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHcC--cchHHHHHHHHHHhHHHHHHHHHh-CCCeeEEE
Confidence 00 000012233455666666554 445666778888999999999999 89998864
No 171
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.89 E-value=1.8e-20 Score=188.40 Aligned_cols=330 Identities=14% Similarity=0.082 Sum_probs=192.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
......+++++++++++.+.. ++||+|||+|+..++++++... ...|.. +++.+|+.....|.....+....|
T Consensus 89 ~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~----~~~g~~--~~~~vi~~~~~yhg~~~~~~~~~~ 161 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYY----AQKGEP--HRYKFMSRYRGYHGNTMATMAATG 161 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHH----HTTTCT--TCCEEEEETTCCCCSSHHHHHSCC
T ss_pred CCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHH----HhcCCC--CCCEEEEECCCcCCCCHHHHhcCC
Confidence 456677889999999988665 9999999999999999998421 111110 224345455555555444444333
Q ss_pred CC---------CCCeEEeeCCCCCCC---C---------HHHHHHHHHHHHHCCCccEEEEeccC-CCccccccC----h
Q psy12303 190 LG---------TDNCVEVPSDKRGRL---I---------PSELERLVLERKAKGDIPFFVNCTSG-TTVLGAFDP----I 243 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~~---d---------~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~~----l 243 (480)
.. ...+..++.....+. | +++|++++++. ...++++|+++.+ +| +|.+.| +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l 238 (452)
T 3n5m_A 162 QAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYM 238 (452)
T ss_dssp CGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHH
T ss_pred chhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHH
Confidence 21 013455554222111 2 89999999731 1223788899888 89 998876 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhc--CCc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQ--MSA 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~--~~~ 320 (480)
++|.++|++||+++|+|++|.++......+.. ...++ ..|+++ +.|.++++ .+.|+++.+ +++.+.... ...
T Consensus 239 ~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~-~~~~~-~~di~t--~sK~l~~G~~~ig~~~~~-~~i~~~~~~~~~~~ 313 (452)
T 3n5m_A 239 KAVHETCQKHGALLISDEVICGFGRTGKAFGF-MNYDV-KPDIIT--MAKGITSAYLPLSATAVK-REIYEAFKGKGEYE 313 (452)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG-GGTTC-CCSEEE--ECGGGGTTSSCCEEEEEE-HHHHGGGCSSSTTC
T ss_pred HHHHHHHHHcCCEEEEecchhCCCcccccchh-hhcCC-CCCEEe--ecccccCCCcceEEEEEC-HHHHHHHhhccCCC
Confidence 99999999999999999999876433222222 22334 567777 45888877 788998874 444443321 001
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEecCCc
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK----SMPDKFYLILEPE 396 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~----~~~~g~~~~~~~~ 396 (480)
.++.. .+.....+...+++..+..-.-+++.++..++.+++++.|. + ++.+..+ ++.
T Consensus 314 ~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~-~~~ 374 (452)
T 3n5m_A 314 FFRHI-----------------NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGE-HPLVGDI-RGK 374 (452)
T ss_dssp SCCCC-----------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT-CTTEEEE-EES
T ss_pred Ccccc-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE-EEE
Confidence 11100 01112334444444333211113344555555556555554 4 4555543 233
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeee-CCcccEEEEecccCCCCHHHHHHHHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPL-NDLPNFFRNIISSAAVTEGDIDFLLTEMDR 475 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~-~~~~~~~R~~~~~~~~t~~di~~~~~~l~~ 475 (480)
...+.+.+....... . .+.. ....++.+.+.++|+++...... .+..+++|++ ++..+|+++|++++++|++
T Consensus 375 g~~~~i~~~~~~~~~-~--~~~~---~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~-~~~~~t~e~i~~~l~~l~~ 447 (452)
T 3n5m_A 375 GLLVGIELVNDKETK-E--PIDN---DKIASVVNACKEKGLIIGRNGMTTAGYNNILTLA-PPLVISSEEIAFVIGTLKT 447 (452)
T ss_dssp SSCEEEEEEEETTTT-E--ECCH---HHHHHHHHHHHHTTEECEECTTSSTTCCCEEEEC-CCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCCccc-C--CCCH---HHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEE-CCCCCCHHHHHHHHHHHHH
Confidence 444444442211000 0 0000 01235778888898554433211 1114799999 8889999999999999999
Q ss_pred hhccC
Q psy12303 476 LGHDL 480 (480)
Q Consensus 476 ~~~~l 480 (480)
+++++
T Consensus 448 ~l~~~ 452 (452)
T 3n5m_A 448 AMERI 452 (452)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 88764
No 172
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.88 E-value=2.1e-21 Score=191.85 Aligned_cols=282 Identities=12% Similarity=0.045 Sum_probs=185.2
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHcCC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVCGL 190 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~g~ 190 (480)
.++++.+++++|.+ ..+++++|++|+..++. +.. ||+ .|+++...|.+....+ ...|+
T Consensus 70 ~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~-l~~--------------~gd-~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 70 NCLEKAVAALDGAK--YCLAFASGLAATVTITH-LLK--------------AGD-QIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp HHHHHHHHHHHTCS--EEEEESCHHHHHHHHHT-TSC--------------TTC-EEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred HHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-HhC--------------CCC-EEEEeCCCcchHHHHHHHHHHHcCC
Confidence 34556688888886 35556667888888876 422 445 7888888998866554 34565
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC-cEEEeeccccccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN-MWLHVDAAWGGGLLL 269 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~-~~l~vD~a~~~~~~~ 269 (480)
+++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|+++| +++++|++|+.+...
T Consensus 132 ---~v~~v~~~-----d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~ 197 (403)
T 3cog_A 132 ---KISFVDCS-----KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQ 197 (403)
T ss_dssp ---EEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTC
T ss_pred ---EEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccC
Confidence 78888876 899999988754 899999999999999999999999999999 999999999987642
Q ss_pred cccccCcccCCCCCCccceeCccccCCCccc--ceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLLQ--CSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHN 347 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~ 347 (480)
.+. .. ++|+++.|+||++++|.+ +|+++.+++.+..........+ +...
T Consensus 198 ~~~-~~-------~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~---------------------g~~~ 248 (403)
T 3cog_A 198 RPL-AL-------GADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSL---------------------GAVP 248 (403)
T ss_dssp CTT-TT-------TCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHH---------------------CCCC
T ss_pred Ccc-cc-------CCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhc---------------------CCCC
Confidence 221 12 789999999999998765 5888876665544332110000 0002
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCe--------------EEecC---CceeEEEEEeecCccC
Q psy12303 348 DIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKF--------------YLILE---PEMVNVSFWYLPTRVR 410 (480)
Q Consensus 348 ~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~--------------~~~~~---~~~~~v~f~~~~~~~~ 410 (480)
..+..|+.++.+ +.+..+.++..+++..+.+.+++ .+.+ ++..+ ...++++|.+....
T Consensus 249 ~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~-- 323 (403)
T 3cog_A 249 SPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLES-NPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTL-- 323 (403)
T ss_dssp CHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCH--
T ss_pred CHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCH--
Confidence 344566655543 33455566666677777777766 4433 22211 12566666532110
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEe------------eeee------------CCc-ccEEEEecccCCCCHHH
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVG------------YQPL------------NDL-PNFFRNIISSAAVTEGD 465 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~------------~~~~------------~~~-~~~~R~~~~~~~~t~~d 465 (480)
....+.+.+.+.+... +... .+. .+++|+| .+..+++++
T Consensus 324 ---------------~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlS-vg~e~~~d~ 387 (403)
T 3cog_A 324 ---------------QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLS-VGLEDEEDL 387 (403)
T ss_dssp ---------------HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEE-CCSSCHHHH
T ss_pred ---------------HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEE-eCCCCHHHH
Confidence 1122333333432211 1000 021 4799999 777899999
Q ss_pred HHHHHHHHHHhhc
Q psy12303 466 IDFLLTEMDRLGH 478 (480)
Q Consensus 466 i~~~~~~l~~~~~ 478 (480)
|+.+.++|+++.+
T Consensus 388 i~~l~~al~~~~~ 400 (403)
T 3cog_A 388 LEDLDQALKAAHP 400 (403)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999988765
No 173
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.88 E-value=1.3e-21 Score=194.98 Aligned_cols=308 Identities=8% Similarity=-0.056 Sum_probs=191.1
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHH--HHHHHHHHhcCchhHhcCCC---ccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNL--YAFLAARHKMFPTYKEKGLS---AIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~--~al~~~~~~~~~~~~~~g~~---~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
++++.++++++++++++++|+|+++++. .++.++.... .|.. ..+|+ .|++..++|..+...+...|.
T Consensus 74 ~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~------~g~~~~~~~~gd-~Vlv~~p~y~~~~~~~~~~g~ 146 (423)
T 3ez1_A 74 SARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGV------RGSTGPWLSQTP-KMIVTVPGYDRHFLLLQTLGF 146 (423)
T ss_dssp HHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCC------TTCSSCGGGGCC-EEEEEESCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccC------CCccccccCCCC-EEEEcCCCcHHHHHHHHHcCC
Confidence 4556688888998889999999999997 7777665410 0100 00024 788889999999999999998
Q ss_pred CCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEe-ccCCCccccccChH---HHHHHH-HHcCcEEEeeccccc
Q psy12303 191 GTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNC-TSGTTVLGAFDPIE---EIADIC-QKYNMWLHVDAAWGG 265 (480)
Q Consensus 191 ~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~-~~~~~~~G~~~~l~---~I~~i~-~~~~~~l~vD~a~~~ 265 (480)
+++.+|.++++ +|+++|++++++ ..++++|++ ++++||||.+.+.+ +|.++| ++||+++|+|++|+.
T Consensus 147 ---~~~~v~~~~~g-~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 147 ---ELLTVDMQSDG-PDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp ---EEEEEEEETTE-ECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred ---EEEeccCCCCC-CCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 88899988765 999999999952 123888865 48999999998876 888888 899999999999985
Q ss_pred ccccc-ccccCc-cc-----CCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 266 GLLLS-KKYRHP-RL-----TGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 266 ~~~~~-~~~~~~-~~-----~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
..+.. .....+ .. .+..+.++++.|++|+++.+.++|+++.++ .+..........+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~--------------- 282 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE-DNIRWLSKYLGAQS--------------- 282 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH-HHHHHHHHHHHHSC---------------
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH-HHHHHHHHHHhhhc---------------
Confidence 43322 110000 00 012255688889999877678899888654 44433221110000
Q ss_pred ccccCCCCCCchHHHHHHHHhcH------HHHHHHHHHHH----HHHHHHHHHHhcCCC-CeEEecCCceeEEEEEeecC
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGD------EGFEKQIDRLM----ELAEYMVKKIKSMPD-KFYLILEPEMVNVSFWYLPT 407 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~------~~~~~~~~~~~----~l~~~l~~~l~~~~~-g~~~~~~~~~~~v~f~~~~~ 407 (480)
.....+..+++...+.. +.+++..+... .+.+.|.+.|.+ .. ++++. .|..+++++...+.
T Consensus 283 ------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~-~p~~g~~~~~~~~~ 354 (423)
T 3ez1_A 283 ------IGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGE-GGEYATWT-LPKGGYFISLDTAE 354 (423)
T ss_dssp ------SCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TTSSEEEC-CCSBSSCEEEEESS
T ss_pred ------cCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-CCCceEEe-CCCccEEEEEECCC
Confidence 00122222222222211 22333333333 344455555555 44 47764 55555554433332
Q ss_pred ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-----CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 408 RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 408 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. . ...+.+.+.+.|+.+...+... ...+++|++ .... ++++|++++++|++++++
T Consensus 355 ~-~--------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis-~~~~-~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 355 P-V--------------ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLA-PTRP-PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp S-C--------------HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEEC-CSSS-CHHHHHHHHHHHHHHHHH
T ss_pred C-c--------------HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEE-cCCC-CHHHHHHHHHHHHHHHHH
Confidence 1 0 2356677778885443312111 115799999 4433 999999999999987653
No 174
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.81 E-value=1.1e-24 Score=215.11 Aligned_cols=309 Identities=11% Similarity=0.018 Sum_probs=206.0
Q ss_pred hHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 110 FILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
..++++++.+++++.+| .++.++++|+|+++|+..++.++.. ||+ .|++..++|+++..++..
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--------------~gd-~vl~~~p~~~~~~~~~~~ 132 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTK--------------EGE-AVLINSPVYPPFARSVRL 132 (392)
Confidence 56788888888888888 4567899999999999999988754 334 788888999999998888
Q ss_pred cCCCCCCeEEeeCC-C--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeec
Q psy12303 188 CGLGTDNCVEVPSD-K--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 188 ~g~~~~~v~~v~~~-~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~ 261 (480)
.|. +++.+|.+ + ++.+|+++|++++++. ++++|++++++|++|.+.+ +++|.++|++||+++++|+
T Consensus 133 ~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De 204 (392)
T 3b1d_A 133 NNR---KLVSNSLKEENGLFQIDFEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDE 204 (392)
Confidence 887 67778874 3 3568999999998732 1778889999999999865 8999999999999999999
Q ss_pred cccccccccccccCcccCCC----CCCccceeCccccCC-CcccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 262 AWGGGLLLSKKYRHPRLTGI----ERADSVTWNPHKLMG-TLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 262 a~~~~~~~~~~~~~~~~~~~----~~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+|+.+........ .+..+ .+.++++.+++|+++ .+..+|++++.++.+..........+...
T Consensus 205 ~~~~~~~~g~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----------- 271 (392)
T 3b1d_A 205 IHQDLTLFGHEHV--SFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHH----------- 271 (392)
Confidence 9998765321110 11111 244577889999997 55678998876654444332111111000
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhh
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEK 416 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 416 (480)
........++..++.. +.+.+++..++..++++++.+.|++++|++++. ++..+.+.+...+.. +.+
T Consensus 272 ------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~i~~~~~--~~~--- 338 (392)
T 3b1d_A 272 ------EVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDFSDY--GLT--- 338 (392)
Confidence 0001111222223332 345567778888889999999987624688764 455555543222210 000
Q ss_pred HHHHhhhhhHHHHHHHH-hcccEEEeeeeeC-CcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 417 RLNILGEITPILKGRMM-QAGTMMVGYQPLN-DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 417 ~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~-~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
..++.+.|. +.|+.+.....+. ...+++|+++. .++++|++++++|+++++
T Consensus 339 --------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 339 --------DDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA---APKSLVEEICKRIVCCLP 391 (392)
Confidence 134566675 5675443322221 11578999943 258999999999988764
No 175
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.88 E-value=8.6e-22 Score=195.94 Aligned_cols=315 Identities=12% Similarity=0.062 Sum_probs=190.0
Q ss_pred chhcChhhHHHHHHHHHHHHHHhCC--CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc----eEEEec-C
Q psy12303 103 TYEIAPVFILMETVVLEKMRQIIGW--QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ----LVMFTS-D 175 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~----~~vl~~-~ 175 (480)
.|....+..++.+.+.+++.+.+|. +++++++|+|+|+|+..++.+++. ||+ ..|+++ .
T Consensus 70 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~--------------~gd~~~~~~vi~~~~ 135 (417)
T 3g7q_A 70 NYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAG--------------RRADGSTKKVLFPLA 135 (417)
T ss_dssp STTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSB--------------C----CCBEEEESSC
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcC--------------CCccCCcceEEEeCC
Confidence 4555556678888888888777765 567899999999999999988754 222 156776 7
Q ss_pred CCchhHHHHHHHcC----CCCCCeEEeeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHH
Q psy12303 176 QCHYSVRSCAAVCG----LGTDNCVEVPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIA 247 (480)
Q Consensus 176 ~~h~s~~~~~~~~g----~~~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~ 247 (480)
++|+.+...+...+ .+. .+..++.+. ++.+|+++|+ ++++ +++|++++++||+|.+.| +++|.
T Consensus 136 p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~--~~~~------~~~v~~~~p~NptG~~~~~~~~~~l~ 206 (417)
T 3g7q_A 136 PEYIGYADSGLEDDLFVSARP-NIELLPEGQFKYHVDFEHLH--IGEE------TGMICVSRPTNPTGNVITDEELMKLD 206 (417)
T ss_dssp CCHHHHHC-----CCEEECCC-EEEEEGGGEEEEECCGGGCC--CCTT------EEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CccccchhhccchhhhccccC-cccccCCcccccccCHHHhc--cccC------ceEEEECCCCCCCCCccCHHHHHHHH
Confidence 78877766654332 211 344444432 3578998887 4333 899999999999999988 89999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++|++||+++|+|++|+.+........ ......+.++++.|++|++..+.++|+++. ++.+..........+..
T Consensus 207 ~~a~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~--- 280 (417)
T 3g7q_A 207 RLANQHNIPLVIDNAYGVPFPGIIFSE--ARPLWNPNIILCMSLSKLGLPGSRCGIIIA-NDKTITAIANMNGIISL--- 280 (417)
T ss_dssp HHHHHTTCCEEEECTTCTTTTCCBCSC--CCCCCCTTEEEEEESGGGTCTTSCCEEEEC-CHHHHHHHHHHHHHHCC---
T ss_pred HHHHHcCCEEEEeCCCccccccccccc--cccCCCCCEEEEEechhccCCCcceEEEEe-CHHHHHHHHHhhcceee---
Confidence 999999999999999986422111111 111223567888899997666577898775 44444433211110000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHhcH-HHHHH-HHHHHHHHHHHHHHHHhcCCC--CeEEecCCceeEEEEE
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD-EGFEK-QIDRLMELAEYMVKKIKSMPD--KFYLILEPEMVNVSFW 403 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-~~~~~-~~~~~~~l~~~l~~~l~~~~~--g~~~~~~~~~~~v~f~ 403 (480)
++.......+...+..... +...+ +.++..++.+++.+.|.+.++ ++++. .|..+.+++.
T Consensus 281 ---------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~g~~~~~ 344 (417)
T 3g7q_A 281 ---------------APGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIH-KPEGAIFLWL 344 (417)
T ss_dssp ---------------CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEE-CCCBSSEEEE
T ss_pred ---------------CCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceee-CCCcceEEEE
Confidence 0000111122222222111 11222 445566677777777765234 47765 4555555543
Q ss_pred eecC-ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-Cc-------ccEEEEecccCCCCHHHHHHHHHHHH
Q psy12303 404 YLPT-RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-DL-------PNFFRNIISSAAVTEGDIDFLLTEMD 474 (480)
Q Consensus 404 ~~~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-~~-------~~~~R~~~~~~~~t~~di~~~~~~l~ 474 (480)
..+. ... ..++.+.|.+.|+.+.....+. +. .+++|+++ .. ++++|++++++|+
T Consensus 345 ~~~~~~~~--------------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~-~~--~~~~i~~~~~~l~ 407 (417)
T 3g7q_A 345 WFKDLPIT--------------TELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNY-VP--EPDKIEAGVKILA 407 (417)
T ss_dssp ECTTCSSC--------------HHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEES-CS--CHHHHHHHHHHHH
T ss_pred EcCCCCCC--------------HHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEe-cC--CHHHHHHHHHHHH
Confidence 3332 111 2456677878885544322111 10 46999994 43 8999999999999
Q ss_pred Hhhcc
Q psy12303 475 RLGHD 479 (480)
Q Consensus 475 ~~~~~ 479 (480)
+++++
T Consensus 408 ~~l~~ 412 (417)
T 3g7q_A 408 EEIER 412 (417)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 176
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.88 E-value=1.2e-21 Score=195.65 Aligned_cols=308 Identities=10% Similarity=-0.069 Sum_probs=192.5
Q ss_pred HHHHHHHHHhCCCCCCeEECCChhHHHH--HHHHHHHHhcCchhHhcCC----CccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 116 VVLEKMRQIIGWQGGDSILAPGGSISNL--YAFLAARHKMFPTYKEKGL----SAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 116 ~~~~~la~~~g~~~~~~~~t~ggt~a~~--~al~~~~~~~~~~~~~~g~----~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
++++.++++++++++++++|+|+++++. .++.++.+.. .|. ...+|+ .|++..++|.++...++..|
T Consensus 82 ~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~------~g~~~~~~~~~gd-~V~v~~p~y~~~~~~~~~~g 154 (427)
T 3ppl_A 82 DIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGN------NDSVQPWSKEETV-KWICPVPGYDRHFSITERFG 154 (427)
T ss_dssp HHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCC------TTCSSCGGGSSCC-EEEEEESCCHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccC------CcccccccCCCCC-EEEEcCCCcHHHHHHHHHcC
Confidence 3555677777998889999999999994 6666665410 000 000145 78889999999999999999
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEec-cCCCccccccChH---HHHHHH-HHcCcEEEeecccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCT-SGTTVLGAFDPIE---EIADIC-QKYNMWLHVDAAWG 264 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~-~~~~~~G~~~~l~---~I~~i~-~~~~~~l~vD~a~~ 264 (480)
. +++.+|+++++ +|+++|+++++. .++++|+++ +++||||.+.|.+ +|.++| ++||+++|+|++|+
T Consensus 155 ~---~~~~v~~~~~g-~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~ 225 (427)
T 3ppl_A 155 F---EMISVPMNEDG-PDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA 225 (427)
T ss_dssp C---EEEEEEEETTE-ECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred C---EEEEeCCCCCC-CCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc
Confidence 8 88999998776 999999999842 127888765 8899999998876 888888 99999999999998
Q ss_pred ccccccccccC-ccc-----CCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCC
Q psy12303 265 GGLLLSKKYRH-PRL-----TGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGD 338 (480)
Q Consensus 265 ~~~~~~~~~~~-~~~-----~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (480)
...+....... +.. .+..+.++++.|++|+++.+.++|+++.. +.+............
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~-~~l~~~~~~~~~~~~--------------- 289 (427)
T 3ppl_A 226 VHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS-AENRKWYTGHAGIRG--------------- 289 (427)
T ss_dssp TCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC-HHHHHHHHHHHHHHC---------------
T ss_pred ccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC-HHHHHHHHHHhhccc---------------
Confidence 75442211000 001 11235678888999997766788988754 444433221100000
Q ss_pred ccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccC
Q psy12303 339 KVIQCGRHNDIFKLWLQWRAKGD-----EGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 339 ~~~~~~r~~~~l~~~~~l~~~g~-----~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~ 410 (480)
.....+..++....+.. +.+.+..+...+..+.+.+.|.++ .+++.+. .|..+.+++...+.. .
T Consensus 290 ------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~-~p~~g~~~~~~~~~~-~ 361 (427)
T 3ppl_A 290 ------IGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWT-VPAGGYFISLDVVPG-T 361 (427)
T ss_dssp ------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEEC-CCSBSSCEEEECSTT-C
T ss_pred ------CCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEe-CCCccEEEEEECCcc-h
Confidence 00122233333333221 233444444444555555554331 3457764 455555554333221 0
Q ss_pred CCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC-----CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 411 NMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN-----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~-----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..++.+.|.+.|+.+...+... ...+++|+++ ... ++++|++++++|.+++++
T Consensus 362 --------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~-~~~-~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 362 --------------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAP-SLP-PVEELEVAMDGVATCVLL 419 (427)
T ss_dssp --------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECC-SSS-CHHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEEC-CCC-CHHHHHHHHHHHHHHHHH
Confidence 2356677778885443312111 1257999994 333 899999999999887653
No 177
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.88 E-value=3.6e-22 Score=198.92 Aligned_cols=340 Identities=11% Similarity=-0.020 Sum_probs=211.0
Q ss_pred CCCCccccccCCCChHHhHHHHHHHHcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--CCC--CeEECCChhHHHHHH
Q psy12303 71 GHPMFMNQLSCGLDVVSMAGEWLIATANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--QGG--DSILAPGGSISNLYA 145 (480)
Q Consensus 71 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~--~~~~t~ggt~a~~~a 145 (480)
....|++.....+.++.+. +.+...+.. ....|....+..++.+++.+++....+. +++ ++++|+|||+|+..+
T Consensus 55 ~~G~y~d~~~~~~~~~~v~-~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~ 133 (420)
T 4f4e_A 55 GVGVYTNEDGKIPLLRAVR-DAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIG 133 (420)
T ss_dssp CCCSCCCTTSCCCCCHHHH-HHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHH
T ss_pred eeeeeECCCCCccCcHHHH-HHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHH
Confidence 3344443333333335555 444443333 3344555556677777777766554432 345 789999999999999
Q ss_pred HHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCCCCHHHHHHHHHHHHHCCC
Q psy12303 146 FLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGRLIPSELERLVLERKAKGD 223 (480)
Q Consensus 146 l~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~~~ 223 (480)
+..+... .||+ .|+++.++|.++...++..|. +++.+|. ++++.+|+++|++++++. ..
T Consensus 134 ~~~~~~~------------~~gd-~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~ 194 (420)
T 4f4e_A 134 ADFLRTL------------NPKA-KVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFDGMLAALNGY---EP 194 (420)
T ss_dssp HHHHHHH------------CTTC-CEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHHHHHHHHTTC---CT
T ss_pred HHHHHHh------------CCCC-EEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHHHHHHHHHhC---CC
Confidence 6533211 0445 788888999999999999998 8899998 346889999999999732 12
Q ss_pred ccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccccc--ccCcccCCCCCCccceeCccccCCC-
Q psy12303 224 IPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKK--YRHPRLTGIERADSVTWNPHKLMGT- 297 (480)
Q Consensus 224 ~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~--~~~~~~~~~~~~D~~~~s~hK~~~~- 297 (480)
++++|++++++||||.+.+ +++|+++|++||+++++|++|+.+....+. .....+.+....++++.|++|.++.
T Consensus 195 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 274 (420)
T 4f4e_A 195 GTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLY 274 (420)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCc
Confidence 3889999999999999955 678999999999999999999887653211 0000111222456788899999984
Q ss_pred cccceEEEE--eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--c------HHHHHHH
Q psy12303 298 LLQCSTIHF--KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G------DEGFEKQ 367 (480)
Q Consensus 298 p~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g------~~~~~~~ 367 (480)
+.++|++++ .+................... .+ ...+..+++...+ + .+.++++
T Consensus 275 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 337 (420)
T 4f4e_A 275 GERVGALSIITDSKDEAARVLSQLKRVIRTNY--------------SN---PPTHGGAIVAAVLASPELRASWVQELGEM 337 (420)
T ss_dssp GGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT--------------SS---CCSHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc--------------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 466898864 334333221100000000000 00 1122222222111 1 3456788
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeee
Q psy12303 368 IDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQP 444 (480)
Q Consensus 368 ~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~ 444 (480)
.++..++++++.+.|++ . +++.+. .|..+.++|... . ...+...+.+.|+ ++.+
T Consensus 338 ~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~~~~g~~~~~~~----~--------------~~~~~~~l~~~gI-~v~~-- 394 (420)
T 4f4e_A 338 RDRIRAMRNGLVERLKA-AGIERDFSFI-NAQRGMFSYSGL----T--------------SAQVDRLREEFGI-YAVS-- 394 (420)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCSSCCTHH-HHSCSSEEECCC----C--------------HHHHHHHHHHHCE-ECCT--
T ss_pred HHHHHHHHHHHHHHHHh-cCCCCCceeE-CCCccEEEEeCC----C--------------HHHHHHHHHhCCE-EecC--
Confidence 88899999999999998 5 366653 355666655211 1 1234455556673 3332
Q ss_pred eCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 445 LNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 445 ~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+ .|+++. ..++++|++++++|+++++
T Consensus 395 --~----~Ris~~--~~~~~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 395 --T----GRICVA--ALNTRNLDVVANAIAAVLK 420 (420)
T ss_dssp --T----SEEEGG--GCCTTTHHHHHHHHHHHHC
T ss_pred --C----CeEEEe--cCCHHHHHHHHHHHHHHhC
Confidence 1 299953 2367779999999998753
No 178
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.88 E-value=9.7e-21 Score=189.04 Aligned_cols=305 Identities=11% Similarity=0.077 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....++++.+++++|. ..++|++|||+|+..++++++.... ..+|. .|| +.+|+.....|.+...++...|
T Consensus 106 ~~~~~~l~~~la~~~g~--~~v~~~~sGseA~~~al~~a~~~~~---~~~g~--~~gr~~vi~~~~~yhg~~~~~~~~~g 178 (433)
T 1z7d_A 106 SVPLGICERYLTNLLGY--DKVLMMNTGAEANETAYKLCRKWGY---EVKKI--PENMAKIVVCKNNFSGRTLGCISAST 178 (433)
T ss_dssp EHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHHH---HTSCC--CTTCCEEEEETTC-------------
T ss_pred CHHHHHHHHHHHhhcCC--CeEEEeCCHHHHHHHHHHHHHHHhh---hccCC--CCCCCeEEEEeCCcCCcchhhhcccC
Confidence 45556677888888885 3599999999999999998874200 01121 134 4344444455666555555544
Q ss_pred C-------C--CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHHHHHHHcCcE
Q psy12303 190 L-------G--TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIADICQKYNMW 256 (480)
Q Consensus 190 ~-------~--~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~~i~~~~~~~ 256 (480)
. + ...+..+|.+ |+++|+++++. .++++|+++..++++|.+. ++++|.++|++||++
T Consensus 179 ~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 248 (433)
T 1z7d_A 179 TKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVL 248 (433)
T ss_dssp -------------CEEEECTT-----CHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred CccccccCCCCCCCeEEeCCC-----CHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCE
Confidence 1 0 0245666654 89999999851 1288888888878889865 699999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYD 335 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (480)
+|+|++|+++......... ...++ .+|+++ ++|+++++ .+.|++++++ ++.+.... .. .
T Consensus 249 lI~DEv~~g~g~~g~~~~~-~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~-~~~~~l~~---~~--~---------- 308 (433)
T 1z7d_A 249 FVADEVQTGLGRTGKLLCV-HHYNV-KPDVIL--LGKALSGGHYPISAVLAND-DIMLVIKP---GE--H---------- 308 (433)
T ss_dssp EEEECTTTTTTTTSSSSGG-GGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-HHHTTCCT---TC--C----------
T ss_pred EEEecCccCCCcCCcchhh-HhcCC-CCCEEE--ECccccCCCCCeEEEEECH-HHHhhhcc---cc--c----------
Confidence 9999999864332221111 12233 578775 66999976 5789988754 44332211 00 0
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCC
Q psy12303 336 TGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 336 ~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
..++ .+......++.++++.+.. ++..++..++++++.+.|++. .+.+..+ ++...++.+.+.... .
T Consensus 309 ~~t~---~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~~---~ 378 (433)
T 1z7d_A 309 GSTY---GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNEL---V 378 (433)
T ss_dssp CCTT---TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTTT---C
T ss_pred cccC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccCh---h
Confidence 0000 1111122233333443322 245677778888888888750 2333322 233344444432110 0
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+ ..++.+.|.++|++ +.+. + .+++|++ ++..+|++||++++++|++++++
T Consensus 379 ~-----------~~~~~~~l~~~Gv~-v~~~---~-~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 379 N-----------VLDICLKLKENGLI-TRDV---H-DKTIRLT-PPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp C-----------HHHHHHHHHHTTEE-CCEE---T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred H-----------HHHHHHHHHHCCeE-EecC---C-CCEEEEE-CCcCCCHHHHHHHHHHHHHHHHH
Confidence 0 23577888888844 3332 2 4799999 78889999999999999987653
No 179
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.88 E-value=9.8e-22 Score=195.84 Aligned_cols=309 Identities=10% Similarity=-0.041 Sum_probs=189.1
Q ss_pred HHHHHHHHhCCCCCCeEECCChhHHH--HHHHHHHHHhcCchhHhcCCCcc-C-CceEEEecCCCchhHHHHHHHcCCCC
Q psy12303 117 VLEKMRQIIGWQGGDSILAPGGSISN--LYAFLAARHKMFPTYKEKGLSAI-K-GQLVMFTSDQCHYSVRSCAAVCGLGT 192 (480)
Q Consensus 117 ~~~~la~~~g~~~~~~~~t~ggt~a~--~~al~~~~~~~~~~~~~~g~~~~-~-g~~~vl~~~~~h~s~~~~~~~~g~~~ 192 (480)
+++.+++++|++++++++|+|+++++ ..++.+..... ..|.... . ....|++..++|+.+...++..|.
T Consensus 81 lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~-----~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~-- 153 (422)
T 3d6k_A 81 IRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGN-----NDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGF-- 153 (422)
T ss_dssp HHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCC-----TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTC--
T ss_pred HHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcc-----cccccccccCCCCEEEEeCCccHHHHHHHHHcCC--
Confidence 45557777789888999999999987 34444443210 0010000 0 012688888999999999999988
Q ss_pred CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEE-eccCCCccccccChH---HHHHHHH-HcCcEEEeeccccccc
Q psy12303 193 DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVN-CTSGTTVLGAFDPIE---EIADICQ-KYNMWLHVDAAWGGGL 267 (480)
Q Consensus 193 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~-~~~~~~~~G~~~~l~---~I~~i~~-~~~~~l~vD~a~~~~~ 267 (480)
+++.+|.++++ +|+++|++++++. ++++|+ +++++||||.+.+.+ +|.++|+ +||+++|+|++|+...
T Consensus 154 -~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 154 -EMINVPMTDEG-PDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp -EEEEEEEETTE-ECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred -EEEecCCCCCC-CCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 88899987765 9999999998641 278877 789999999998876 7777787 9999999999998522
Q ss_pred cccccccC-ccc-----CCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccc
Q psy12303 268 LLSKKYRH-PRL-----TGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVI 341 (480)
Q Consensus 268 ~~~~~~~~-~~~-----~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (480)
+..+.... +.. .+..+.++++.|++|+++.+.++|+++++ ++++.........+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~-~~l~~~l~~~~~~~~------------------ 287 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASS-KENIEWYASHANVRG------------------ 287 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECC-HHHHHHHHHHHHHHC------------------
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeC-HHHHHHHHHHHHhhc------------------
Confidence 21111000 010 11224567888999995555678998865 444443321110000
Q ss_pred cCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCccCCCc
Q psy12303 342 QCGRHNDIFKLWLQWRAKGD-----EGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTRVRNMP 413 (480)
Q Consensus 342 ~~~r~~~~l~~~~~l~~~g~-----~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~~~~~~ 413 (480)
.....+...++...+.. +.+++..++..+..+++.+.|.++ .+++++. .|..+++++...+.. +
T Consensus 288 ---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~-~p~~g~~~~~~~~~~----~ 359 (422)
T 3d6k_A 288 ---IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWT-SPTGGYFISVDVVPG----T 359 (422)
T ss_dssp ---SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEC-CCSBSSCEEEEESTT----C
T ss_pred ---CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEe-CCCcceEEEEECCCC----C
Confidence 00123333344443322 334444555555555555555431 2346764 455555544333321 0
Q ss_pred hhhHHHHhhhhhHHHHHHHHhcccEEEeeee-eC----CcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 414 HEKRLNILGEITPILKGRMMQAGTMMVGYQP-LN----DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 414 ~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~-~~----~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+.+.+.+.|+.+...+. +. ...+++|++ ... ++++++++++++|++++++
T Consensus 360 -----------~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis-~~~-~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 360 -----------ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLA-PSL-PPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp -----------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEEC-CSS-SCHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEe-cCC-CCHHHHHHHHHHHHHHHHH
Confidence 13455677778854433122 21 114799999 444 7999999999999987653
No 180
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=3.4e-21 Score=192.96 Aligned_cols=318 Identities=14% Similarity=0.029 Sum_probs=191.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 109 VFILMETVVLEKMRQIIGWQG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 109 ~~~~~e~~~~~~la~~~g~~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
.......+++++++++++... ..++||+|||+|+..++++++... +++.+|+.....|.+...++..
T Consensus 83 ~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~------------~~~~vi~~~~~yhg~~~~~~~~ 150 (439)
T 3dxv_A 83 ASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKAT------------GRSGVIAFAGAYHGCTVGSMAF 150 (439)
T ss_dssp SEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHH------------SCCEEEEETTCCCCSSHHHHCC
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHh------------CCCEEEEECCCCCCCcHHHHhh
Confidence 345677788999999997654 579999999999999999886421 1243666677777776666554
Q ss_pred cCCCC--C---------CeEEeeCCCCCCC-----CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHH
Q psy12303 188 CGLGT--D---------NCVEVPSDKRGRL-----IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIA 247 (480)
Q Consensus 188 ~g~~~--~---------~v~~v~~~~~~~~-----d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~ 247 (480)
.+... . .+..+|.+..+.- |+++|++++++ .....+++|+++..++++|.+.| +++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 228 (439)
T 3dxv_A 151 SGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFA 228 (439)
T ss_dssp -------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHH
T ss_pred cCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 44311 0 0233444332222 68999999851 11234889999999999999988 99999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++|++||+++|+|++|+++......... ...++ ..|+++ ++|.+++++++|+++.+. +........ ...
T Consensus 229 ~l~~~~~~~li~DE~~~g~g~~g~~~~~-~~~~~-~~di~s--~sK~~~~G~riG~~~~~~-~~~~~~~~~----~~~-- 297 (439)
T 3dxv_A 229 DICRAHGILVVCDEVKVGLARSGRLHCF-EHEGF-VPDILV--LGKGLGGGLPLSAVIAPA-EILDCASAF----AMQ-- 297 (439)
T ss_dssp HHHHHTTCEEEEECTTTCTTTTSSSSGG-GGTTC-CCSEEE--ECGGGGTTSCCEEEEEEH-HHHTSCSSS----SCC--
T ss_pred HHHHHcCCEEEEeccccCCCcCchhhHH-HhcCC-CCCEEE--EcchhcCCcceEEEEECH-HHHhhhcCC----CcC--
Confidence 9999999999999999864322211111 12233 467764 669998777789888653 343322110 000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEe
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~ 404 (480)
.+. ...+.+.+++..+..-.-+++.++..++.+++.+.|.+. .+.+..+ ++....+.+.+
T Consensus 298 ---------------~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~ 360 (439)
T 3dxv_A 298 ---------------TLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMEL 360 (439)
T ss_dssp ---------------TTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEE
T ss_pred ---------------CCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEE
Confidence 011 123333333333211111344556666666666655540 4555543 34444455544
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
............ ...++.+.|.++|+++... . .. .+++|++ ++..+|++++++++++|++++++
T Consensus 361 ~~~~~~~~~~~~-------~~~~~~~~l~~~Gv~v~~~-~-~~-~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 361 VCDRQSREPARA-------ETAKLIYRAYQLGLVVYYV-G-MN-GNVLEFT-PPLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp EEETTTTEECHH-------HHHHHHHHHHHHTEECEEE-S-TT-SCEEEEC-CCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ecCccccCCCHH-------HHHHHHHHHHHCCcEEeec-C-CC-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 321100000000 1245677888888544332 2 11 4799999 88899999999999999988764
No 181
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.88 E-value=1.5e-21 Score=194.24 Aligned_cols=302 Identities=14% Similarity=0.054 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc-eEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ-LVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~-~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....++++++++++|. ..+++|+|||+|+..++++++... ..+|. ||+ .+|+.....|.+...++...|
T Consensus 98 ~~~~~~l~~~la~~~g~--~~v~~~~ggteA~~~al~~~~~~~----~~~~~---~g~~~vi~~~~~yh~~~~~~~~~~g 168 (420)
T 2pb2_A 98 NEPALRLGRKLIDATFA--ERVLFMNSGTEANETAFKLARHYA----CVRHS---PFKTKIIAFHNAFHGRSLFTVSVGG 168 (420)
T ss_dssp CHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHHHHHHHHH----HHHTC---TTCCEEEEETTCCCCSSHHHHHHSS
T ss_pred CHHHHHHHHHHHhhCCC--CeEEEeCCHHHHHHHHHHHHHHHh----hhccC---CCCCEEEEEeCCcCCcCHHHHHhcC
Confidence 45666788889999885 469999999999999999987521 11121 333 344455556666666666665
Q ss_pred CC---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc----ccChHHHHHHHHHcCcE
Q psy12303 190 LG---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA----FDPIEEIADICQKYNMW 256 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~~l~~I~~i~~~~~~~ 256 (480)
.. ...+..+|.+ |+++|+++++++ +++|+++.+++++|. .+++++|.++|++||++
T Consensus 169 ~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~ 237 (420)
T 2pb2_A 169 QPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQAL 237 (420)
T ss_dssp CHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCE
T ss_pred CccccccCCCCCCCeEEecCC-----CHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCE
Confidence 31 0125666653 899999998753 899999999887776 35799999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+|+|++|.++......... ...++ .+|+++ ++|+++++.++|+++++++ +.+... .... .
T Consensus 238 lI~Dev~~g~~~~g~~~~~-~~~~~-~~diit--~sK~l~~G~~iG~~~~~~~-l~~~l~---~~~~-~----------- 297 (420)
T 2pb2_A 238 LVFDEVQCGMGRTGDLFAY-MHYGV-TPDILT--SAKALGGGFPVSAMLTTQE-IASAFH---VGSH-G----------- 297 (420)
T ss_dssp EEEECTTTTTTTTSSSSHH-HHHTC-CCSEEE--ECGGGGTTSCCEEEEECHH-HHTTCC--------C-----------
T ss_pred EEEEcCCcCcccCCcHHHH-HhcCC-CCCeEE--ecccccCCCceEEEEEhHH-HHHhhc---CCCc-C-----------
Confidence 9999999764332211111 11233 478775 5799997778999998653 333211 1000 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEecCCceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP----DKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~----~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
. ++ .+......++..+++.+.. +++.++..++++++.+.|++ . +.+..+ ++...++.+.+.... ..
T Consensus 298 ~--t~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~-~~~g~~~~v~~~~~~--~~ 367 (420)
T 2pb2_A 298 S--TY-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQA-IDEQFDIFSDI-RGMGLLIGAELKPKY--KG 367 (420)
T ss_dssp C--EE-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHH-HHHHHCCEEEE-EEETTEEEEEECGGG--TT
T ss_pred c--cc-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH-HHhcCCCeEEE-EecceEEEEEECCCc--hH
Confidence 0 00 1111122233344444332 35667778888888888876 4 433322 234444555432110 00
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...++.+.|.+.|+++ .+. + .+++|++ ++..+|++|+++++++|++++++
T Consensus 368 -----------~~~~l~~~l~~~Gi~v-~~~---~-~~~iRl~-~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 368 -----------RARDFLYAGAEAGVMV-LNA---G-ADVMRFA-PSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -----------CHHHHHHHHHHTTEEC-EES---S-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHCCCEE-EeC---C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 0245777888888443 332 2 4799999 77889999999999999987754
No 182
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.88 E-value=3.6e-21 Score=190.16 Aligned_cols=299 Identities=15% Similarity=0.096 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....++++.+++++|. .++++|+|||+|+..++.+++... ..| .|| +.+|+.+...|.+...++...|
T Consensus 81 ~~~~~~l~~~la~~~g~--~~v~~~~gg~~a~~~al~~~~~~~-----~~~---~~~~~~vi~~~~~yh~~~~~~~~~~g 150 (397)
T 2ord_A 81 NRPQMELAELLSKNTFG--GKVFFANTGTEANEAAIKIARKYG-----KKK---SEKKYRILSAHNSFHGRTLGSLTATG 150 (397)
T ss_dssp EHHHHHHHHHHHHTTTS--CEEEEESSHHHHHHHHHHHHHHHH-----HHH---CTTCCEEEEEBTCCCCSSHHHHHHSB
T ss_pred CHHHHHHHHHHHHhcCC--CeEEEeCCHHHHHHHHHHHHHHHh-----hcC---CCCCceEEEEcCCcCCCchhhhhccC
Confidence 35566778889999884 469999999999999999876420 000 022 3355555666777777777777
Q ss_pred CC---------CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc----ccChHHHHHHHHHcCcE
Q psy12303 190 LG---------TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA----FDPIEEIADICQKYNMW 256 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~~l~~I~~i~~~~~~~ 256 (480)
.. ...++.+|.+ |+++|+++++++ +++|++++++|++|. .+++++|.++|++||++
T Consensus 151 ~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~ 219 (397)
T 2ord_A 151 QPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDAL 219 (397)
T ss_dssp CHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCE
T ss_pred ChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 52 0126677764 899999988753 899999999999999 36799999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+++|++|++.......... ...+. .+|+++ ++|+++++.++|+++++++ .. ... ... . .
T Consensus 220 li~De~~~~~~~~g~~~~~-~~~~~-~~d~~s--~sK~~~~G~r~G~~~~~~~-~~-~l~---~~~--~----------~ 278 (397)
T 2ord_A 220 LVFDEVQCGMGRTGKLFAY-QKYGV-VPDVLT--TAKGLGGGVPIGAVIVNER-AN-VLE---PGD--H----------G 278 (397)
T ss_dssp EEEECTTTTTTTTSSSSHH-HHHTC-CCSEEE--ECGGGGTTSCCEEEEECST-TC-CCC---TTS--S----------C
T ss_pred EEEEecccCCccCccchhh-hhhCC-CCCeee--eccccCCCcCeEEEEEchH-hc-ccC---CCC--c----------C
Confidence 9999999854322111110 11122 367765 5799997788999998664 22 211 000 0 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CCeEEecCCceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP----DKFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~----~g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
..+ ........++..+++.+.. ++..++..++++++.+.|++ . +.+... ++....+.+.+. ....
T Consensus 279 ~~~---~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~-~~~g~~~~~~~~-~~~~-- 347 (397)
T 2ord_A 279 TTF---GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQE-MKEEYDVVADV-RGMGLMIGIQFR-EEVS-- 347 (397)
T ss_dssp CSS---TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHH-HHHHCTTEEEE-EEETTEEEEEEC-TTSC--
T ss_pred CCC---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-HHHhCCceEEE-EEEeEEEEEEEC-ChHH--
Confidence 000 0000122223333433322 35667778888888888876 3 322221 233444555432 1100
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.+.|+. +.+. + .+++|++ ++..++++|+++++++|+++++++
T Consensus 348 ------------~~~l~~~l~~~gi~-v~~~---~-~~~iRis-~~~~~~~e~i~~~~~~l~~~l~~~ 397 (397)
T 2ord_A 348 ------------NREVATKCFENKLL-VVPA---G-NNTIRFL-PPLTVEYGEIDLAVETLKKVLQGI 397 (397)
T ss_dssp ------------HHHHHHHHHHTTEE-CEEE---T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ------------HHHHHHHHHHCCCE-EccC---C-CCEEEEE-CCcCCCHHHHHHHHHHHHHHHhhC
Confidence 23567778788844 3332 2 4799999 777899999999999999987653
No 183
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.88 E-value=3.6e-21 Score=185.68 Aligned_cols=271 Identities=14% Similarity=0.085 Sum_probs=189.1
Q ss_pred HHHHHHHHHHhC---CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 115 TVVLEKMRQIIG---WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 115 ~~~~~~la~~~g---~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
.++++.++++++ .+++++++|+|+|+|+..++.++ . + .|+++ ++|.++...+...|.
T Consensus 59 ~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-g----------------d-~Vl~~-p~y~~~~~~~~~~g~- 118 (335)
T 1uu1_A 59 EELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-D----------------R-SVFFP-PTYSCYRIFAKAVGA- 118 (335)
T ss_dssp HHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS-S----------------E-EEECS-SSCHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh-C----------------C-cEEEC-CCcHHHHHHHHHcCC-
Confidence 346666888888 77778999999999999888765 2 4 68888 999999999998888
Q ss_pred CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccccc
Q psy12303 192 TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 192 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~~~ 271 (480)
+++.+|.++++.+|+++| + ++++|++++++|++|.+.|.+++.++++.+| ++++|++|+.+... +
T Consensus 119 --~~~~v~~~~~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~ 183 (335)
T 1uu1_A 119 --KFLEVPLTKDLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-S 183 (335)
T ss_dssp --EEEECCCCTTSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-C
T ss_pred --eEEEeccCCCCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-h
Confidence 788899887778888877 2 2889999999999999999999999999999 99999999865321 1
Q ss_pred cccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCch
Q psy12303 272 KYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF 350 (480)
Q Consensus 272 ~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l 350 (480)
... ... ..+.++++.|++|+++.| .++|++++ +++...........| ....+
T Consensus 184 ~~~--~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~-----------------------~~~~~ 236 (335)
T 1uu1_A 184 YVD--FLK-KYENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPF-----------------------NVSYV 236 (335)
T ss_dssp CGG--GGG-TCSSEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHSCTT-----------------------CSCHH
T ss_pred HHH--Hhh-hCCCEEEEecchhhcCCcccCeEEEEe-CHHHHHHHHHhcCCC-----------------------CcCHH
Confidence 111 111 124578888999999743 46899887 455544332211111 01223
Q ss_pred HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHH
Q psy12303 351 KLWLQWRAKG-DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILK 429 (480)
Q Consensus 351 ~~~~~l~~~g-~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~ 429 (480)
..+++...+. .+.+++..++..++++++.+.|++ . |+++. ++....+.+.+ +. . + ..++.
T Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~-~~~~~~~~~~~-~~-~------------~--~~~~~ 297 (335)
T 1uu1_A 237 SQMFAKVALDHREIFEERTKFIVEERERMKSALRE-M-GYRIT-DSRGNFVFVFM-EK-E------------E--KERLL 297 (335)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH-H-TCCBC-CCCSSEEEEEC-CT-H------------H--HHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CcEEc-CCCCeEEEEEC-CC-C------------C--HHHHH
Confidence 3333333321 346778888899999999999998 5 77653 44433333322 11 0 0 23566
Q ss_pred HHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 430 GRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.|.++|+.+ .+ . .+++|+++ + +++|+++++++|+++
T Consensus 298 ~~l~~~gi~v-~~----~-~~~iRis~-~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 298 EHLRTKNVAV-RS----F-REGVRITI-G---KREENDMILRELEVF 334 (335)
T ss_dssp HHHHHHTEEE-EE----E-TTEEEEEC-C---CHHHHHHHHHHHHCC
T ss_pred HHHHHCCEEE-EE----C-CCeEEEEe-C---CHHHHHHHHHHHHhh
Confidence 7777888544 33 2 46999994 2 478899999999864
No 184
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.88 E-value=2.8e-21 Score=188.25 Aligned_cols=296 Identities=14% Similarity=0.123 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce-EEEecCCCchhHHHH---HHHcC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL-VMFTSDQCHYSVRSC---AAVCG 189 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~-~vl~~~~~h~s~~~~---~~~~g 189 (480)
..++++++++++|.+. .++++|||+|+..++.++... |+. +|+++...|++.... +...|
T Consensus 50 ~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~~~~--------------g~~~vvi~~~~~~~~~~~~~~~~~~~g 113 (359)
T 3pj0_A 50 IEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIWADR--------------KENRRVAYHPLSHLEIHEQDGLKELQQ 113 (359)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHHHH--------------HTCCEEEECTTCHHHHSSTTHHHHHHC
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHHhc--------------CCCcEEEEeccceeeehhcchHHHhcC
Confidence 4456677999999876 477799999999999988763 232 577777777765432 24456
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcc-ccccChHHH---HHHHHHcCcEEEeeccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVL-GAFDPIEEI---ADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~~l~~I---~~i~~~~~~~l~vD~a~~~ 265 (480)
. +++.+|. +++.+|+++|+++ .+ ++++|++++++|++ |.+.|.+++ .++|++||+++|+|++|..
T Consensus 114 ~---~~~~v~~-~~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~ 182 (359)
T 3pj0_A 114 I---TPLLLGT-ANQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLW 182 (359)
T ss_dssp C---EEEECSC-TTSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCG
T ss_pred c---eEEecCC-cCCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchh
Confidence 6 7788887 5678999999887 22 38899999998888 688775555 9999999999999999875
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
+...........+. ..+|+++.++||++++|.+ |++ +.++++.+........+- .. .++ .
T Consensus 183 ~~~~~~~~~~~~~~--~~~d~~~~s~sK~~~~~~g-g~~-~~~~~l~~~~~~~~~~~~-~~-----------~~~----~ 242 (359)
T 3pj0_A 183 EITPFYQKSAEEIC--ALFDSVYVSFYKGIGGIAG-AIL-AGNDDFVQEAKIWKRRYG-GD-----------LIS----L 242 (359)
T ss_dssp GGHHHHTCCHHHHH--TTCSEEEEESSSTTCCSSC-EEE-EECHHHHHHHHHHHHHTT-CC-----------CSC----C
T ss_pred cchhhhCCCHHHhh--ccCCEEEEeccccCCCcce-EEE-ECCHHHHHHHHHHHHHhC-CC-----------cch----h
Confidence 54211100000011 2678999999999988755 444 456665544321100000 00 000 0
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe-cCCceeEEEEEeecCccCCCchhhHHHHhhhh
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI-LEPEMVNVSFWYLPTRVRNMPHEKRLNILGEI 424 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 424 (480)
...+.+...++. ...+.+++..++++++.+.|++ ++++++. .++..+.+.+++..... . .
T Consensus 243 ~~~~~a~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~-----------~--~ 303 (359)
T 3pj0_A 243 YPYILSADYYFE-----KRIGKMAEYFEAAKGLAERFNS-CSGVKTVPEVPVSNMFHVYFENSAD-----------E--I 303 (359)
T ss_dssp HHHHHHHHHHHH-----HHGGGHHHHHHHHHHHHHHHHT-STTEEEESSSCSSSEEEEEESSCHH-----------H--H
T ss_pred HHHHHHHHHHHH-----HHHHHhHHHHHHHHHHHHHHhh-CCCceeeccCCcceEEEEEecCccc-----------h--h
Confidence 001111222222 1234556678889999999999 8999985 34445555554421110 0 0
Q ss_pred hHHHHHHHHhcccEEEeee--eeCCcccEEEEecc--cCCCCHHHHHHHHHHHHHh
Q psy12303 425 TPILKGRMMQAGTMMVGYQ--PLNDLPNFFRNIIS--SAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 425 ~~~i~~~l~~~g~~~~~~~--~~~~~~~~~R~~~~--~~~~t~~di~~~~~~l~~~ 476 (480)
...+.+.|.+.|+.+.... ...+ ..++|+++. ....+.+++++.+++|.+.
T Consensus 304 ~~~l~~~l~~~GV~v~~g~~~~~~~-~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 304 GAILTKIQDETGVGISGYLQEKSAD-VCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HHHHHHHHHHHCEECCSCCEEEETT-EEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcEecCCccccCCC-ceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 2456788888885543321 1233 578999843 2346889999999988765
No 185
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=9.1e-22 Score=193.80 Aligned_cols=285 Identities=12% Similarity=0.095 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHc
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVC 188 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~ 188 (480)
...++++.+++++|.+ ..+++++||+|+..++. ... ||+ .|+++...|.+....+ +..
T Consensus 56 ~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~~--------------~gd-~Vi~~~~~y~~~~~~~~~~~~~~ 117 (393)
T 1n8p_A 56 NRENLERAVAALENAQ--YGLAFSSGSATTATILQ-SLP--------------QGS-HAVSIGDVYGGTHRYFTKVANAH 117 (393)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TSC--------------SSC-EEEEESSCCHHHHHHHHHTSTTT
T ss_pred hHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-HcC--------------CCC-EEEEeCCCchHHHHHHHHHHHHc
Confidence 3456677799999987 36777777999999987 432 455 6777778888665544 333
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc----CcEEEeecccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY----NMWLHVDAAWG 264 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~----~~~l~vD~a~~ 264 (480)
|. +++.+|.+ | ++|+++++++ +++|++++++|++|.+.|+++|.++|+++ |+++|+|++|+
T Consensus 118 G~---~v~~v~~~-----d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~ 182 (393)
T 1n8p_A 118 GV---ETSFTNDL-----L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFL 182 (393)
T ss_dssp CS---CCEEESSH-----H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTT
T ss_pred Cc---EEEEeCCC-----h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCcc
Confidence 44 78888876 6 8888888653 89999999999999999999999999999 99999999999
Q ss_pred ccccccccccCcccCCCCCCccceeCccccCCCcc-cc-eEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcccc
Q psy12303 265 GGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QC-STIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQ 342 (480)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 342 (480)
.+... +.... ++|+++.|+||+++++. .. |+++.+++............
T Consensus 183 ~~~~~-~~~~~-------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~--------------------- 233 (393)
T 1n8p_A 183 SPYIS-NPLNF-------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA--------------------- 233 (393)
T ss_dssp HHHHC-CGGGG-------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH---------------------
T ss_pred ccccC-CHHHc-------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh---------------------
Confidence 88653 22223 68999999999998542 25 77776555554433211000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEecCC------------------c-eeEEEE
Q psy12303 343 CGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK-FYLILEP------------------E-MVNVSF 402 (480)
Q Consensus 343 ~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g-~~~~~~~------------------~-~~~v~f 402 (480)
.+.......+++.+.. .+.+....++..++++.+.+.|++ .+. +.-+..| . .+++.|
T Consensus 234 ~g~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~-~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~ 310 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRG--LKTLHLRVRQAALSANKIAEFLAA-DKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISF 310 (393)
T ss_dssp HCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTS-CTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEE
T ss_pred cCCCCCHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh-CCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEE
Confidence 0011223445544443 234566677778888899999988 666 5432111 2 445666
Q ss_pred EeecCccCCCchhhHHHHhhhhhHHHHHHHHh------cccE---EEeee--ee----------CCc-ccEEEEecccCC
Q psy12303 403 WYLPTRVRNMPHEKRLNILGEITPILKGRMMQ------AGTM---MVGYQ--PL----------NDL-PNFFRNIISSAA 460 (480)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~------~g~~---~~~~~--~~----------~~~-~~~~R~~~~~~~ 460 (480)
.+.... .+ ...+...+.. .|.. ...+. .. .+. .+.+|+| .+..
T Consensus 311 ~l~~~~------~~--------~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS-~g~~ 375 (393)
T 1n8p_A 311 RIKGGA------EA--------ASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRIS-VGIE 375 (393)
T ss_dssp EESSCH------HH--------HHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEE-CCSS
T ss_pred EeCCcH------HH--------HHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEE-EccC
Confidence 542110 00 1223333322 2211 11100 00 011 4799999 8899
Q ss_pred CCHHHHHHHHHHHHHhh
Q psy12303 461 VTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 461 ~t~~di~~~~~~l~~~~ 477 (480)
+++++|+.+.++|+++.
T Consensus 376 ~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 376 DTDDLLEDIKQALKQAT 392 (393)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 186
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.88 E-value=6.6e-21 Score=192.45 Aligned_cols=352 Identities=15% Similarity=0.160 Sum_probs=195.1
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhc
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKM 153 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~ 153 (480)
.|+++..+... +.+. +.+...+......|...+... ++++++++++|.+ .+++|+|||+||..++.++++..
T Consensus 42 ~ylD~~~~~~~-~~v~-~a~~~~l~~~~~~y~~~~~~~----~l~~~la~~~~~~--~v~~t~~gt~A~~~al~~~~~~~ 113 (467)
T 2oqx_A 42 VFIDLLTDSGT-GAVT-QSMQAAMMRGDEAYSGSRSYY----ALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_dssp CSEECSCCSSC-SCCC-HHHHHHTTSCCCCSSSCHHHH----HHHHHHHHHHCCS--EEEEEC--CCSHHHHHHHHHHHH
T ss_pred eeEecccCCCc-HHHH-HHHHHHhccCcceeccCchhH----HHHHHHHHHhCcC--cEEEcCCcHHHHHHHHHHHhccc
Confidence 57777554443 3333 334444433333454444444 4456688888875 59999999999999999987520
Q ss_pred CchhHhcCCCccCC-ceEEEecCCCchhHH-HHHHHcCCCCCCeEEe------eCC----CCCCCCHHHHHHHHHHHHHC
Q psy12303 154 FPTYKEKGLSAIKG-QLVMFTSDQCHYSVR-SCAAVCGLGTDNCVEV------PSD----KRGRLIPSELERLVLERKAK 221 (480)
Q Consensus 154 ~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~-~~~~~~g~~~~~v~~v------~~~----~~~~~d~~~L~~~i~~~~~~ 221 (480)
....|. ++ + .|+++ ..|+... ......|. .++.. +.+ .++.+|+++|++++++..
T Consensus 114 ---~~~~G~---~~~d-~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~-- 180 (467)
T 2oqx_A 114 ---EQEKGL---DRSK-MVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG-- 180 (467)
T ss_dssp ---HHHHCC---CTTT-CEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--
T ss_pred ---cccCCC---Cccc-eEEec-ccccccchhhhhccCc---ceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--
Confidence 000121 11 4 36666 5775533 33333443 22221 222 356789999999998631
Q ss_pred CCccEEEEeccCCCcc-ccc---cChHHHHHHHHHcCcEEEeeccccc-ccc--------ccccccCcccC--CCCCCcc
Q psy12303 222 GDIPFFVNCTSGTTVL-GAF---DPIEEIADICQKYNMWLHVDAAWGG-GLL--------LSKKYRHPRLT--GIERADS 286 (480)
Q Consensus 222 ~~~~~~v~~~~~~~~~-G~~---~~l~~I~~i~~~~~~~l~vD~a~~~-~~~--------~~~~~~~~~~~--~~~~~D~ 286 (480)
..++++|++++++|++ |.+ +++++|.++|++||+|+|+|++++. +.. ....... .+. ..+.+|+
T Consensus 181 ~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~-~~~~~~~~~~d~ 259 (467)
T 2oqx_A 181 PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE-QITRETYKYADM 259 (467)
T ss_dssp GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH-HHHHHHGGGCSE
T ss_pred CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH-HHhhhhhccCCe
Confidence 1138899999999998 765 4588999999999999999988766 321 1110000 000 0125788
Q ss_pred ceeCccccCCCcccceEEEEeCc---hhhHhhhcCCcccc-cccccccCcccCCCCccccCCCCCCchHHHHHHHHhc-H
Q psy12303 287 VTWNPHKLMGTLLQCSTIHFKQD---GLLISCNQMSAEYL-FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG-D 361 (480)
Q Consensus 287 ~~~s~hK~~~~p~~~g~~~~~~~---~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g-~ 361 (480)
+++++||+++.|.| |+++.++. +.+.... .+. ..... . +.+. ..+..+ .++.. + .
T Consensus 260 ~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~-------~~~~-~~~~~~-~al~~-~l~ 319 (467)
T 2oqx_A 260 LAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECR----TLCVVQEGF-----P-------TYGG-LEGGAM-ERLAV-GLY 319 (467)
T ss_dssp EEEESSSTTCCSSC-EEEEECSGGGHHHHHHHH----HHHHHTTSS-----C-------CCCC-CCHHHH-HHHHH-HHH
T ss_pred EEEecccccCCCCc-eEEEecChhHHHHHHHHH----HhhhccCCc-----c-------cccc-hhhhHH-HHHHH-hhH
Confidence 89999999987644 55555544 2222211 110 00000 0 0000 111111 12211 1 1
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH-HhcccEE
Q psy12303 362 EGF-EKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM-MQAGTMM 439 (480)
Q Consensus 362 ~~~-~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~g~~~ 439 (480)
+.+ ++.+++..++++++.+.|++ . ++++. +.....+.+.+.. ...+.+..+ +. ...+.+.| .+.|+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~----~~--~~~l~~~L~~~~gv~~ 389 (467)
T 2oqx_A 320 DGMNLDWLAYRIAQVQYLVDGLEE-I-GVVCQ-QAGGHAAFVDAGK-LLPHIPADQ----FP--AQALACELYKVAGIRA 389 (467)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHH-T-TCCEE-EECSSCEEEEHHH-HSTTSCGGG----CH--HHHHHHHHHHHHCEEC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-C-CCeee-cCCceEEEEechh-hcccCCccc----cc--HHHHHHHHHHhcCcee
Confidence 112 23456667889999999999 6 88776 3333333343211 000111111 10 23556777 6777544
Q ss_pred Eeeeee-CC-----------cccEEEEecccCC-CCHHHHHHHHHHHHHhhc
Q psy12303 440 VGYQPL-ND-----------LPNFFRNIISSAA-VTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 440 ~~~~~~-~~-----------~~~~~R~~~~~~~-~t~~di~~~~~~l~~~~~ 478 (480)
...+.. .+ ..+++|++ ++.. +|++||++++++|+++++
T Consensus 390 ~~~~~~~~~~~~~~g~~~~~~~~~iRl~-~~~~~~t~e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 390 VEIGSFLLGRDPKTGKQLPCPAELLRLT-IPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_dssp EEESHHHHCBCTTTCSBCCCSCCEEEEC-CCTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccCccCeEEEE-ecCCCCCHHHHHHHHHHHHHHHh
Confidence 332210 00 02699999 7777 999999999999998765
No 187
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.88 E-value=2.4e-21 Score=191.68 Aligned_cols=342 Identities=9% Similarity=-0.026 Sum_probs=208.7
Q ss_pred CCCCCccccccCCCChHHhHHHHHHHHcC-cCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEE--CCChhHHHHH
Q psy12303 70 TGHPMFMNQLSCGLDVVSMAGEWLIATAN-TNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSIL--APGGSISNLY 144 (480)
Q Consensus 70 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~--t~ggt~a~~~ 144 (480)
.+...|+++...+...+.+. +.+..... .....|....+..++.+.+.+++....|. ++.++++ |+|||+|+..
T Consensus 33 l~~g~~~d~~~~~~~~~~v~-~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~ 111 (401)
T 7aat_A 33 LGVGAYRDDNGKPYVLNCVR-KAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRV 111 (401)
T ss_dssp CCCCSCCCTTSCCCCCHHHH-HHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHH
T ss_pred eeeeeEECCCCCEechHHHH-HHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHH
Confidence 44455555554444434343 33333322 23344554455667777777776655553 3668877 9999999999
Q ss_pred HHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCC
Q psy12303 145 AFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKG 222 (480)
Q Consensus 145 al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~ 222 (480)
++.+++... .||+ .|+++.++|.++...++..|. +++.+|.+ +++.+|++++++.+++. .
T Consensus 112 ~~~~l~~~~-----------~~gd-~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 173 (401)
T 7aat_A 112 GANFLQRFF-----------KFSR-DVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKTCSLDFTGAMEDISKI---P 173 (401)
T ss_dssp HHHHHHHHC-----------TTCC-EEEEEESCCTTHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTS---C
T ss_pred HHHHHHHhc-----------cCCC-EEEEcCCCchhHHHHHHHcCC---eeEeeeeeccccCccCHHHHHHHHHhC---C
Confidence 988765310 1556 788888999999999999988 78889875 36889999998888652 2
Q ss_pred CccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc---cccCcccCCCCCCccceeCccccCC
Q psy12303 223 DIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK---KYRHPRLTGIERADSVTWNPHKLMG 296 (480)
Q Consensus 223 ~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~---~~~~~~~~~~~~~D~~~~s~hK~~~ 296 (480)
.++++|++++++||||.+.+ +++|+++|++||+++++|++|..+..... ......+.....-.+++.|++|.++
T Consensus 174 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 253 (401)
T 7aat_A 174 EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMG 253 (401)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC
T ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccc
Confidence 34889999999999997754 78899999999999999999987654211 0000001111134567889999998
Q ss_pred Cc-ccceEEEEe--CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--c------HHHHH
Q psy12303 297 TL-LQCSTIHFK--QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G------DEGFE 365 (480)
Q Consensus 297 ~p-~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g------~~~~~ 365 (480)
.| ..+|++++. ++.................. .+ ..+.....+...+ + .+.++
T Consensus 254 ~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~ 316 (401)
T 7aat_A 254 LYGERAGAFTVICRDAEEAKRVESQLKILIRPMY---------------SN--PPMNGARIASLILNTPELRKEWLVEVK 316 (401)
T ss_dssp CGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHH---------------SS--CCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred cccCceEEEEEEeCCHHHHHHHHHHHHHHHHhcc---------------CC--CChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 54 458888862 33321111000000000000 00 1122222222222 1 34467
Q ss_pred HHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEee
Q psy12303 366 KQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGY 442 (480)
Q Consensus 366 ~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~ 442 (480)
+..++..++++++.+.|++ . +++++. +|..+.++|... . .+.+...+.+.| +++.+
T Consensus 317 ~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~-~~~~~~~~~~~~----~--------------~~~~~~ll~~~g-i~v~~ 375 (401)
T 7aat_A 317 GMADRIISMRTQLVSNLKK-EGSSHNWQHI-TDQIGMFCFTGL----K--------------PEQVERLTKEFS-IYMTK 375 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCSCCHHH-HHCCSSEEECCC----C--------------HHHHHHHHHHHC-EECCT
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCCCCcee-cCCcceEEecCC----C--------------HHHHHHHHHhCC-EeccC
Confidence 7788888999999999988 4 235442 455666665211 1 112222334556 33321
Q ss_pred eeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 443 QPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 443 ~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
.+|+++ +.. ++++|+++++.|+++++
T Consensus 376 --------~~Ris~-~~~-~~~~i~~~~~~l~~~~~ 401 (401)
T 7aat_A 376 --------DGRISV-AGV-ASSNVGYLAHAIHQVTK 401 (401)
T ss_dssp --------TCEEEG-GGC-CTTTHHHHHHHHHHHHC
T ss_pred --------CCeEEe-ccC-ChhhHHHHHHHHHHHhC
Confidence 369994 443 44559999999998753
No 188
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.88 E-value=7.7e-21 Score=190.07 Aligned_cols=305 Identities=10% Similarity=0.050 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++.+++++++|. +.+++++|||+|+..++++++.... ..+|. .|| +.+|+.....|.+...++...|.
T Consensus 118 ~~~~~l~~~la~~~g~--~~v~~~~sGseA~~~al~~~~~~~~---~~~g~--~~g~~~vi~~~~~yhg~~~~~~~~~g~ 190 (439)
T 2oat_A 118 NVLGEYEEYITKLFNY--HKVLPMNTGVEAGETACKLARKWGY---TVKGI--QKYKAKIVFAAGNFWGRTLSAISSSTD 190 (439)
T ss_dssp SSHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHHH---HTTCC--CTTCCEEEEETTCCCCSSHHHHTTCCC
T ss_pred HHHHHHHHHHHHhcCC--CEEEEeCCHHHHHHHHHHHHHHHhh---hccCC--CCCCCeEEEEcCCCCCCCHhHhhcCCC
Confidence 3445667778888875 3599999999999999999874210 01121 133 43555555667776666665441
Q ss_pred -------CC--CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc----ChHHHHHHHHHcCcEE
Q psy12303 191 -------GT--DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD----PIEEIADICQKYNMWL 257 (480)
Q Consensus 191 -------~~--~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----~l~~I~~i~~~~~~~l 257 (480)
++ ..+..+|.+ |+++|+++++. .++++|+++..++++|.+. ++++|.++|++||+++
T Consensus 191 ~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gill 260 (439)
T 2oat_A 191 PTSYDGFGPFMPGFDIIPYN-----DLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLF 260 (439)
T ss_dssp HHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEE
T ss_pred hhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 10 266777764 89999999852 1278888888878889765 6999999999999999
Q ss_pred EeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 258 HVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 258 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
|+|++|.++......... ...++ .+|+++ ++|+++++ .+.|++++++ +..+.... .. . .
T Consensus 261 I~DEv~~g~g~~g~~~~~-~~~~~-~~Di~t--~sK~l~~G~~~~G~v~~~~-~~~~~l~~---~~--~----------~ 320 (439)
T 2oat_A 261 IADEIQTGLARTGRWLAV-DYENV-RPDIVL--LGKALSGGLYPVSAVLCDD-DIMLTIKP---GE--H----------G 320 (439)
T ss_dssp EEECTTTTTTTTSSSSGG-GGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-HHHTTSCT---TS--S----------C
T ss_pred EEeccccCCccCCcchhH-HHhCC-CCcEEE--ecccccCCCCCeEEEEECH-HHHhccCC---CC--c----------c
Confidence 999999764332221111 12233 568774 67999876 6789988764 44332211 00 0 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe--cCCceeEEEEEeecCccCCCch
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI--LEPEMVNVSFWYLPTRVRNMPH 414 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~--~~~~~~~v~f~~~~~~~~~~~~ 414 (480)
.++ .+......++.++++.+.. ++..++..++++++.+.|++ + ++.++ .++...++.+.+.... +.+
T Consensus 321 ~t~---~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~-l-~~~~~~~~~~~g~~~~v~l~~~~--~~~- 389 (439)
T 2oat_A 321 STY---GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMK-L-PSDVVTAVRGKGLLNAIVIKETK--DWD- 389 (439)
T ss_dssp CSS---TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTT-S-CTTTEEEEEEETTEEEEEECCCS--SCC-
T ss_pred cCC---CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHH-h-cCCCcEEEEeeeeEEEEEEecCc--cHH-
Confidence 000 1111122233334443322 35678888999999999988 4 33211 1223334444332110 000
Q ss_pred hhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 415 EKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 415 ~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..++.+.|.++|++ +.+ .+ .+++|++ ++..+|++||++++++|+++++++
T Consensus 390 ----------~~~l~~~l~~~Gv~-v~~---~~-~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~~ 439 (439)
T 2oat_A 390 ----------AWKVCLRLRDNGLL-AKP---TH-GDIIRFA-PPLVIKEDELRESIEIINKTILSF 439 (439)
T ss_dssp ----------HHHHHHHHHHTTEE-CCB---SS-SSEEEEC-CCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ----------HHHHHHHHHHCCeE-Eec---CC-CCEEEEE-CccCCCHHHHHHHHHHHHHHHHhC
Confidence 23567788888844 333 12 4799999 788899999999999999987654
No 189
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=1e-21 Score=195.13 Aligned_cols=325 Identities=10% Similarity=-0.006 Sum_probs=202.7
Q ss_pred HHHHHHHHc--CcCCcchhcChhhHHHHHHHHHHHHHHhCC--CCCCeEE--CCChhHHHHHHHHHHHHhcCchhHhcCC
Q psy12303 89 AGEWLIATA--NTNMFTYEIAPVFILMETVVLEKMRQIIGW--QGGDSIL--APGGSISNLYAFLAARHKMFPTYKEKGL 162 (480)
Q Consensus 89 ~~~~l~~~~--~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~g~ 162 (480)
+.+.+.... ......|...++..++++.+.+++....|. +++++++ |+|||+|+..++..++..
T Consensus 53 v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~---------- 122 (412)
T 1ajs_A 53 VRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARW---------- 122 (412)
T ss_dssp HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHh----------
Confidence 335555544 222334544445556666655555333332 4568999 999999999997654321
Q ss_pred CccCC-----ceEEEecCCCchhHHHHHHHcCCCCCC-eEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 163 SAIKG-----QLVMFTSDQCHYSVRSCAAVCGLGTDN-CVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 163 ~~~~g-----~~~vl~~~~~h~s~~~~~~~~g~~~~~-v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
.|| + .|+++.++|+++...+...|. + ++.+|.+ +++.+|+++|++++++. +.++++|++++++
T Consensus 123 --~~g~~~~~d-~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~ 193 (412)
T 1ajs_A 123 --YNGTNNKDT-PVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLHACAH 193 (412)
T ss_dssp --SSSSSCCCS-CEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSC
T ss_pred --CcCcCCCCC-eEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEECCCC
Confidence 044 4 678888899999999999887 7 8888884 56789999999999752 2237888899999
Q ss_pred CccccccC---hHHHHHHHHHcCcEEEeecccccccccc---ccccCcccCCCCCCccceeCccccCCC-cccceEEEEe
Q psy12303 235 TVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLS---KKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHFK 307 (480)
Q Consensus 235 ~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~---~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~~ 307 (480)
|+||.+.+ +++|.++|++||+++|+|++|.++.... +......+.....-++++.+++|.++. +.++|++++.
T Consensus 194 nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~ 273 (412)
T 1ajs_A 194 NPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVV 273 (412)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEe
Confidence 99999955 6789999999999999999998765421 100000011111223778899999986 4568999872
Q ss_pred --CchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHH
Q psy12303 308 --QDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G------DEGFEKQIDRLMELAEY 377 (480)
Q Consensus 308 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g------~~~~~~~~~~~~~l~~~ 377 (480)
+++.+.........+.... ..+ ...+..+++...+ + .+.+++..++..+++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (412)
T 1ajs_A 274 AKEPDSILRVLSQMQKIVRVT--------------WSN---PPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSE 336 (412)
T ss_dssp CSSHHHHHHHHHHHHHHHHTT--------------TSS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcc--------------cCC---CChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 4442221100000000000 000 1222333332222 1 23667888899999999
Q ss_pred HHHHHhcCCC---CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEE
Q psy12303 378 MVKKIKSMPD---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRN 454 (480)
Q Consensus 378 l~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~ 454 (480)
+.+.|++ .. +++++ .|..+.+.|... . ...+...+.+.|+ .+.+ .+|+
T Consensus 337 l~~~L~~-~~~~~~~~~~-~~~~~~~~~~~~----~--------------~~~~~~~l~~~gv-~v~~--------~~Ri 387 (412)
T 1ajs_A 337 LRARLEA-LKTPGTWNHI-TDQIGMFSFTGL----N--------------PKQVEYLINQKHI-YLLP--------SGRI 387 (412)
T ss_dssp HHHHHHH-TTCSSCCHHH-HHCCSSEEECCC----C--------------HHHHHHHHHTTCE-ECCT--------TSEE
T ss_pred HHHHHHh-hCCCCCeeEE-cCCCceEEEeCC----C--------------HHHHHHHHHhCCE-EecC--------CcEE
Confidence 9999998 53 36653 355555555211 1 1123344556673 3332 2699
Q ss_pred ecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 455 IISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 455 ~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
++. . .+++++++++++|+++++++
T Consensus 388 s~~-~-~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 388 NMC-G-LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp EGG-G-CCTTTHHHHHHHHHHHHHHC
T ss_pred Eee-e-CCHHHHHHHHHHHHHHHHhc
Confidence 944 2 48999999999999887653
No 190
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.87 E-value=2.3e-20 Score=188.04 Aligned_cols=324 Identities=15% Similarity=0.096 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.....++.+.++++++.+...++|++|||+||..|+++++... ...|. |+ +.+|+.....|.....+....+
T Consensus 98 ~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~----~~~g~---~~~~~ii~~~~~yHg~t~~~~~~~~ 170 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYW----QNKGQ---PEKTVIISRKNAYHGSTVASSALGG 170 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEEcCcCCCccHHhhhccC
Confidence 4556677888999987765689999999999999999998741 22232 22 3344455555655544444333
Q ss_pred C--------CCCCeEEeeCCC-----CCCCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 190 L--------GTDNCVEVPSDK-----RGRLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 190 ~--------~~~~v~~v~~~~-----~~~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ....+..+|... ++ .| +++|++++++.. ...+++|+++..+++.|.+.+ ++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~ 247 (472)
T 3hmu_A 171 MAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWP 247 (472)
T ss_dssp CHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHH
T ss_pred ChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHH
Confidence 1 111455666432 12 34 788888887431 123789999999899999887 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
+|.++|++||+++|+|++|.++......+.. ...++ ..|++++ .|.++++ .+.|+++.+ +++.+... . ..+
T Consensus 248 ~l~~l~~~~gillI~DEv~~gfgr~G~~~a~-~~~~v-~pdi~t~--sK~l~gg~~plG~v~~~-~~i~~~~~-~--~~~ 319 (472)
T 3hmu_A 248 EIQRICDKYDILLIADEVICGFGRTGNWFGT-QTMGI-RPHIMTI--AKGLSSGYAPIGGSIVC-DEVAHVIG-K--DEF 319 (472)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSCHH-HHHTC-CCSEEEE--CGGGTTTSSCCEEEEEE-HHHHHHHT-T--SCB
T ss_pred HHHHHHHHcCCEEEEEccccCCcccCccchh-HHhCC-CCceeee--chhhhcCCcceEEEEEC-HHHHHhcc-c--CCc
Confidence 9999999999999999999976443322211 22234 5788875 4998876 588988875 44444331 1 111
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC--CCCeEEecCCceeEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLM-ELAEYMVKKIKSM--PDKFYLILEPEMVNV 400 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~-~l~~~l~~~l~~~--~~g~~~~~~~~~~~v 400 (480)
.+. .+.....+++.+++..+..-.-+++.++.. ++.+++++.|++. .+.+..+ ++...++
T Consensus 320 ~~~----------------~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~ 382 (472)
T 3hmu_A 320 NHG----------------YTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMMA 382 (472)
T ss_dssp CCC----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTEE
T ss_pred ccc----------------CCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceE
Confidence 010 011123344444444332111134556666 6777777777550 3445443 2344455
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+.+....... +..........+.+.|.++|+++... .+++|++ ++..+|+++|++++++|++++++
T Consensus 383 ~i~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~v~~~------g~~iRi~-p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 383 SIALTPNKASRAK---FASEPGTIGYICRERCFANNLIMRHV------GDRMIIS-PPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp EEEECSCGGGTCC---BSSCTTHHHHHHHHHHHHTTBCCEEE------TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccccc---ccchhHHHHHHHHHHHHHCCcEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 5544322100000 00000011346778888999655443 2699999 88999999999999999987653
No 191
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=4.7e-22 Score=197.53 Aligned_cols=353 Identities=10% Similarity=0.004 Sum_probs=215.1
Q ss_pred HHHHHHHHhhccC-CccCCCCCccccccCCCChHHhHHHHHHH-HcCc-CCcchhcChhhHHHHHHHHHHHHHHhCC--C
Q psy12303 54 QKLIDDCFTTLKY-QVRTGHPMFMNQLSCGLDVVSMAGEWLIA-TANT-NMFTYEIAPVFILMETVVLEKMRQIIGW--Q 128 (480)
Q Consensus 54 ~~i~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~~~~~~~e~~~~~~la~~~g~--~ 128 (480)
..+.+.+++.-.. -+......|+++......++.+. +.+.. .+.. ....|....+..++.+.+.+++....|. +
T Consensus 17 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~-~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~ 95 (412)
T 1yaa_A 17 FGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVK-AAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQ 95 (412)
T ss_dssp HHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHH-HHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHH-HHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCC
Confidence 3445555433111 12345555555543333444444 55555 4432 2234544455667777766666554442 4
Q ss_pred CCCeEE--CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC-CC-CC
Q psy12303 129 GGDSIL--APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS-DK-RG 204 (480)
Q Consensus 129 ~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~-~~-~~ 204 (480)
++++++ |+|||+|+..++..++.. .||+ .|+++.++|+++...++..|. +++.+|. ++ ++
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~------------~~gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~ 159 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKF------------FPDK-LVYLSKPTWANHMAIFENQGL---KTATYPYWANETK 159 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHH------------CTTC-CEEEEESCCTTHHHHHHTTTC---CEEEEECEETTTT
T ss_pred cceEEEEeccchHhHHHHHHHHHHHh------------CCCC-EEEEeCCCCccHHHHHHHcCc---eEEEEeeecCCCC
Confidence 568999 999999999886544321 0445 678888899999999998887 8888988 43 67
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccc---ccccCccc
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLS---KKYRHPRL 278 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~---~~~~~~~~ 278 (480)
.+|+++|++++++. ...+.++++++++||||.+.+ +++|.++|++||+++++|++|+.+.... +......+
T Consensus 160 ~~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 236 (412)
T 1yaa_A 160 SLDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLG 236 (412)
T ss_dssp EECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHH
T ss_pred ccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHH
Confidence 89999999999753 112566677999999999965 6678999999999999999997654321 10000001
Q ss_pred CCCCC---CccceeCccccCCC-cccceEEE--E----eCch----hhHhhhcC-CcccccccccccCcccCCCCccccC
Q psy12303 279 TGIER---ADSVTWNPHKLMGT-LLQCSTIH--F----KQDG----LLISCNQM-SAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 279 ~~~~~---~D~~~~s~hK~~~~-p~~~g~~~--~----~~~~----~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
..... -++++.|++|.++. +.++|+++ . +++. +....... ...+. +
T Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-------------------~ 297 (412)
T 1yaa_A 237 VEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVS-------------------N 297 (412)
T ss_dssp HHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTS-------------------S
T ss_pred HhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccC-------------------C
Confidence 10101 35678899999985 34578887 4 1443 33322110 00000 0
Q ss_pred CCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCceeEEEEEeecCccCCC
Q psy12303 344 GRHNDIFKLWLQWRAK--G------DEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~--g------~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
...+...++...+ + .+.++++.++..++++++.+.|++ .. ++++. .|..+.++|. .+.
T Consensus 298 ---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~~~~~~~~~~----~~~-- 366 (412)
T 1yaa_A 298 ---PPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVK-LGTPGNWDHI-VNQCGMFSFT----GLT-- 366 (412)
T ss_dssp ---CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCSSCCTHH-HHCCSSEEEC----CCC--
T ss_pred ---CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCeeee-ccCceEEEee----CCC--
Confidence 1222222222222 1 246788888899999999999988 54 36654 4555555552 111
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
...+...+.+.|+ .+.+ ++|+++. . .+++++++++++|+++++.
T Consensus 367 ------------~~~~~~~l~~~gi-~v~~--------~~Ris~~-~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 367 ------------PQMVKRLEETHAV-YLVA--------SGRASIA-G-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ------------HHHHHHHHHHHCE-ECCT--------TSEEEGG-G-CCTTTHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHhCCE-Eecc--------CcEEEEc-c-CCHhHHHHHHHHHHHHHHh
Confidence 1234334445663 3332 5799944 3 5899999999999988764
No 192
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.87 E-value=6.6e-22 Score=198.21 Aligned_cols=161 Identities=12% Similarity=0.057 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH----HHc
Q psy12303 113 METVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA----AVC 188 (480)
Q Consensus 113 ~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~----~~~ 188 (480)
..+++++++++++|.+ ++++++||++|+..++. .. .||+ .|+++...|.++...+ ...
T Consensus 134 ~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-~~--------------~~Gd-~Vi~~~~~y~~~~~~~~~~~~~~ 195 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-LI--------------KNGE-EIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-TS--------------CTTC-EEEEESSCCHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-Hh--------------CCCC-EEEEECCCchhHHHHHHHHHHHc
Confidence 5667889999999986 57888999998876653 21 1556 7888888998887653 344
Q ss_pred CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeecccccccc
Q psy12303 189 GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLL 268 (480)
Q Consensus 189 g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~ 268 (480)
|. +++.+|.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..
T Consensus 196 G~---~v~~v~~~-----d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~ 261 (464)
T 1ibj_A 196 GV---VVKRVNTT-----KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL 261 (464)
T ss_dssp TC---EEEEECTT-----SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT
T ss_pred CC---EEEEeCCC-----CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 55 78888875 899999988754 89999999999999999999999999999999999999987643
Q ss_pred ccccccCcccCCCCCCccceeCccccCCCcccc--eEEEEeCchhhH
Q psy12303 269 LSKKYRHPRLTGIERADSVTWNPHKLMGTLLQC--STIHFKQDGLLI 313 (480)
Q Consensus 269 ~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~--g~~~~~~~~~~~ 313 (480)
..+. .. ++|+++.|+||++++|.|+ |+++++++.+..
T Consensus 262 ~~~~-~~-------~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~ 300 (464)
T 1ibj_A 262 SRPL-EL-------GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAK 300 (464)
T ss_dssp CCGG-GT-------TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHH
T ss_pred CChh-hc-------CCEEEEECCcccccCCCCCcEEEEEEChHHHHH
Confidence 2221 12 7899999999999987654 888887655443
No 193
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.87 E-value=3e-20 Score=187.05 Aligned_cols=324 Identities=14% Similarity=0.090 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHc
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~ 188 (480)
......+++++++++++.+...++|++|||+|+..++++++... ...|. |+ +.+|+.....|.....+....
T Consensus 92 ~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~----~~~g~---~~~~~vi~~~~~yhg~~~~~~~~~ 164 (459)
T 4a6r_A 92 THPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYW----DVQGK---PEKKTLIGRWNGYHGSTIGGASLG 164 (459)
T ss_dssp CCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTCCCCSSHHHHHHS
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEECCCcCCccHHHHhhc
Confidence 34666788899999998776789999999999999999998731 22232 22 434444555555554444443
Q ss_pred CCCC---------CCeEEeeCCC-----CCCCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----
Q psy12303 189 GLGT---------DNCVEVPSDK-----RGRLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---- 242 (480)
Q Consensus 189 g~~~---------~~v~~v~~~~-----~~~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---- 242 (480)
+... ..+..++... ++ +| +++|++++++.. ...+++|+++..+++.|.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~~~ 241 (459)
T 4a6r_A 165 GMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPATY 241 (459)
T ss_dssp CCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTH
T ss_pred CChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCHHH
Confidence 3211 1344555322 12 45 788888887521 123788888888888888877
Q ss_pred hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcc
Q psy12303 243 IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
+++|.++|++||+++|+|++|.++......+.. ...++ ..|++++ .|.++++ .++|+++.+ +++.+..... ..
T Consensus 242 l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~-~~~~~-~pdi~t~--sK~l~gg~~~lg~v~~~-~~i~~~~~~~-~~ 315 (459)
T 4a6r_A 242 WPEIERICRKYDVLLVADEVICGFGRTGEWFGH-QHFGF-QPDLFTA--AKGLSSGYLPIGAVFVG-KRVAEGLIAG-GD 315 (459)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHH-HHHTC-CCSEEEE--CGGGGTTSSCCEEEEEC-HHHHHHHHHH-CT
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcccccchH-hhcCC-CCCeeeh--hhhhcCCCCCccceeeC-HHHHHHhhcC-CC
Confidence 999999999999999999999876443222111 12233 5688775 4988766 588988864 4444433210 00
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHH----HHHhcCCCCeEEecCCc
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLM-ELAEYMV----KKIKSMPDKFYLILEPE 396 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~-~l~~~l~----~~l~~~~~g~~~~~~~~ 396 (480)
+.... +.....+...+++..+..-.-++..++.. ++.++++ +.|.+ .+.+..+ ++.
T Consensus 316 ~~~~~-----------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~~ 376 (459)
T 4a6r_A 316 FNHGF-----------------TYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSR-FEHVDDV-RGV 376 (459)
T ss_dssp THHHH-----------------HHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTT-CTTEEEE-EEE
T ss_pred cccCC-----------------CCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE-EEE
Confidence 00000 00012333333333321100123344444 4444444 44455 5666554 344
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
...+.+.+.......... .. -.....++.+.+.++|+++... .+++|++ ++..+|++++++++++|+++
T Consensus 377 g~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~l~~~Gv~v~~~------g~~iRi~-~~~~~t~e~i~~~l~~l~~~ 445 (459)
T 4a6r_A 377 GMVQAFTLVKNKAKRELF-PD---FGEIGTLCRDIFFRNNLIMRAC------GDHIVSA-PPLVMTRAEVDEMLAVAERC 445 (459)
T ss_dssp TTEEEEEECSBTTTTBCC-SS---TTHHHHHHHHHHHHTTEECEEE------TTEEEEC-CCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccccc-cc---hHHHHHHHHHHHHHCCeEEecC------CCEEEEE-CCCCCCHHHHHHHHHHHHHH
Confidence 444455443221000000 00 0011346778888898554433 2699999 88999999999999999987
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 446 l~~ 448 (459)
T 4a6r_A 446 LEE 448 (459)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 194
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.87 E-value=1.4e-21 Score=193.31 Aligned_cols=303 Identities=11% Similarity=-0.017 Sum_probs=183.7
Q ss_pred chhcChhhHHHHHHHHHHHHHH--hC-CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 103 TYEIAPVFILMETVVLEKMRQI--IG-WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 103 ~~~~~~~~~~~e~~~~~~la~~--~g-~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.|...++..++++. ++++ .| .+++++++|+|+++++..++.. .. ||+ .|++..++|+
T Consensus 70 ~y~~~~g~~~lr~~----la~~l~~g~~~~~~v~~~~G~~~al~~~~~~-~~--------------~gd-~Vl~~~p~y~ 129 (400)
T 3asa_A 70 GYGPDFGLPALRQK----LSEDFYRGFVDAKEIFISDGAKVDLFRLLSF-FG--------------PNQ-TVAIQDPSYP 129 (400)
T ss_dssp CCCCTTCCHHHHHH----HHHTTSTTSSCGGGEEEESCHHHHHHHHHHH-HC--------------SSC-EEEEEESCCH
T ss_pred CCCCCCCCHHHHHH----HHHHHHcCCCCHHHEEEccChHHHHHHHHHH-cC--------------CCC-EEEECCCCcH
Confidence 34333344455544 5665 57 6667899999999998875432 22 445 7888888999
Q ss_pred hHHHHHHHcCCCCCC-eEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCc
Q psy12303 180 SVRSCAAVCGLGTDN-CVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNM 255 (480)
Q Consensus 180 s~~~~~~~~g~~~~~-v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~ 255 (480)
++..++...|. + ++.+|.++++.++.+ +++. .++++|++++++||||.+.| +++|.++|+++|+
T Consensus 130 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~-l~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~ 197 (400)
T 3asa_A 130 AYLDIARLTGA---KEIIALPCLQENAFFPE-FPED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEI 197 (400)
T ss_dssp HHHHHHHHTTC---SEEEEEECCGGGTTCCC-CCTT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC---cceEecccchhcCcccC-hhhc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 99999988887 7 888998754322221 2211 23788999999999999987 6678899999999
Q ss_pred EEEeeccccccccccccccCcccCCCC---CCccceeCccccCC-CcccceEEEEeCchh------hHhhhcCCcccccc
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIE---RADSVTWNPHKLMG-TLLQCSTIHFKQDGL------LISCNQMSAEYLFM 325 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~---~~D~~~~s~hK~~~-~p~~~g~~~~~~~~~------~~~~~~~~~~~l~~ 325 (480)
++++|++|+.+...... .. .+..++ +.++++.+++|+++ .+.++|++++++... +............
T Consensus 198 ~li~De~~~~~~~~~~~-~~-~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (400)
T 3asa_A 198 LILFDAAYSTFISDPSL-PK-SIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTF- 274 (400)
T ss_dssp EEEEECTTGGGCCCTTS-CS-SGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHC-
T ss_pred EEEEEchhhhhhcCCCC-CC-chhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCc-
Confidence 99999999965432110 01 111221 23477889999997 445689988755431 2211100000000
Q ss_pred cccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEee
Q psy12303 326 QDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYL 405 (480)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~ 405 (480)
.+ ...+...++...+....+++..++..++++++.+.|++ . ++++..+.....+.+.+.
T Consensus 275 -----------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~ 333 (400)
T 3asa_A 275 -----------------NG--ASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLA-T-GFEVFGGEHAPYLWVKPT 333 (400)
T ss_dssp -----------------CC--CCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH-T-TCEEEECSSSSEEEEECC
T ss_pred -----------------cC--CChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeeCCCCceEEEEecc
Confidence 00 12222223323221114667778888999999999999 5 888764333333433313
Q ss_pred cCccCCCchhhHHHHhhhhhHHHHHHHHhc-ccEEEeeeeeCC--cccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 406 PTRVRNMPHEKRLNILGEITPILKGRMMQA-GTMMVGYQPLND--LPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-g~~~~~~~~~~~--~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.... ..++.+.|.++ |+. +.++...+ ..+++|++ . .+++++|++++++|++++++
T Consensus 334 ~~~~~--------------~~~~~~~l~~~~gv~-v~~g~~f~~~~~~~iRis-~--~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 334 QANIS--------------DRDLFDFFLREYHIA-ITPGIGFGRSGSGFVRFS-S--LGKREDILAACERLQMAPAL 392 (400)
T ss_dssp CTTCC--------------TTTHHHHHHHHHSEE-CEEGGGGCGGGTTCEEEE-C--CSCHHHHHHHHHHHHC----
T ss_pred CCCCC--------------HHHHHHHHHHhCCEE-EeChhHhCCCCCCEEEEE-e--eCCHHHHHHHHHHHHHHHHh
Confidence 32211 11345566554 644 44322111 14689998 3 56899999999999988764
No 195
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.87 E-value=9.6e-21 Score=190.12 Aligned_cols=315 Identities=12% Similarity=0.032 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE-ecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF-TSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl-~~~~~h~s~~~~~~~~g 189 (480)
.....+++++++++++.+.+.++|++|||+||..|+++++... ...|. ||+..|+ .....|.....+....+
T Consensus 117 ~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~----~~~g~---~g~~~ii~~~~~yhg~~~~~~~~~~ 189 (457)
T 3tfu_A 117 HEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYW----RGRGL---PGKRRLMTWRGGYHGDTFLAMSICD 189 (457)
T ss_dssp CHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTCCCCSSHHHHTTSC
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHH----HhcCC---CCCceEEEEcCCcCCccHHhhcccC
Confidence 3455678888999998765689999999999999999998631 11222 3343444 45555555444433311
Q ss_pred -C---------CCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEecc-CCCccccccC----hHHHHHHHHH
Q psy12303 190 -L---------GTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTS-GTTVLGAFDP----IEEIADICQK 252 (480)
Q Consensus 190 -~---------~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~~----l~~I~~i~~~ 252 (480)
. ....+..+|... ....|+++|++++++.. .++++|+++. +++++|.+.+ +++|.++|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~ 266 (457)
T 3tfu_A 190 PHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRR 266 (457)
T ss_dssp CC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHH
T ss_pred CcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHH
Confidence 0 001334444432 22358899999998531 2388999999 8999998876 9999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
||+++|+|++|.++......+.. ...++ ..|+++ +.|.++++ .+.|+++.++ +..+.........+.+.
T Consensus 267 ~gillI~DEv~~g~gr~G~~~a~-~~~~~-~pdiit--~sK~l~gG~~~lG~v~~~~-~i~~~~~~~~~~~~~~~----- 336 (457)
T 3tfu_A 267 YEVLLIFDEIATGFGRTGALFAA-DHAGV-SPDIMC--VGKALTGGYLSLAATLCTA-DVAHTISAGAAGALMHG----- 336 (457)
T ss_dssp HTCEEEEECTTTTTTTTSSSSTH-HHHTC-CCSEEE--ECGGGGTTSSCCEEEEEEH-HHHHHHHHSSSCSCCCC-----
T ss_pred cCCEEEEEcCccCCccccchhHh-HhcCC-CceEEE--EChhhhCCCcceEEEEEcH-HHHHHhhccCCCceeEe-----
Confidence 99999999999875432222211 12233 578776 55988876 3789888754 34433321111100000
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeEEecCCceeEEEEEeecCcc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM--PDKFYLILEPEMVNVSFWYLPTRV 409 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~--~~g~~~~~~~~~~~v~f~~~~~~~ 409 (480)
.+.....+++.+++..+..-.-++..++..++.+++++.|++. .+++..+ ++...++.+.+. ...
T Consensus 337 -----------~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~-~~~ 403 (457)
T 3tfu_A 337 -----------PTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECD-RPV 403 (457)
T ss_dssp -----------CTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEES-SCC
T ss_pred -----------cCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEEC-Ccc
Confidence 0111234444444433321111345677778888888888761 2455443 233344444332 111
Q ss_pred CCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 410 RNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 410 ~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ..++.++|.++|+++... .+++|++ ++...|++||++++++|++++++
T Consensus 404 ~--------------~~~~~~~l~~~Gv~v~~~------~~~lRi~-p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 404 D--------------LAVATPAALDRGVWLRPF------RNLVYAM-PPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp C--------------HHHHHHHHHHTTEECCCB------TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred c--------------HHHHHHHHHHCCeEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 245778888888543321 4699998 88889999999999999998764
No 196
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.87 E-value=1.6e-20 Score=186.06 Aligned_cols=300 Identities=11% Similarity=0.037 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++++++++++|.+ ++++|+|||+|+..++.+++... ...|. +| +.+|+.+...|.+...+....+.
T Consensus 81 ~~~~~l~~~la~~~~~~--~v~~~~gg~~a~~~al~~~~~~~----~~~~~---~g~~~vi~~~~~y~~~~~~~~~~~~~ 151 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKFA----HDRYG---SHKSGIVAFKNAFHGRTLFTVSAGGQ 151 (406)
T ss_dssp HHHHHHHHHHHHHSSCS--EEEEESSHHHHHHHHHHHHHHHH----HHHTC---TTCCEEEEETTCCCCSSHHHHHHSSC
T ss_pred HHHHHHHHHHHhhCCCC--eEEEeCcHHHHHHHHHHHHHHHH----HhcCC---CCCcEEEEECCCcCCCcHHHhhccCC
Confidence 44567788899999876 69999999999999999886521 11111 23 43555555566665555555442
Q ss_pred CC---------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-----cChHHHHHHHHHcCcE
Q psy12303 191 GT---------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-----DPIEEIADICQKYNMW 256 (480)
Q Consensus 191 ~~---------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-----~~l~~I~~i~~~~~~~ 256 (480)
.. ..+..+|.+ |+++|+++++++ +++|+++ |+|++|.+ .++++|.++|++||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~ 219 (406)
T 4adb_A 152 PAYSQDFAPLPADIRHAAYN-----DINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNAL 219 (406)
T ss_dssp GGGTGGGCSCCSSEEEECTT-----CHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCE
T ss_pred ccccccCCCCCCCceEeCCC-----cHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 11 244555543 899999988744 8999999 88999865 4699999999999999
Q ss_pred EEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCC
Q psy12303 257 LHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDT 336 (480)
Q Consensus 257 l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (480)
+|+|++|+++......... ...++ ..|+++ ++|+++++.++|+++.+ ++..+....... .
T Consensus 220 li~De~~~~~~~~g~~~~~-~~~~~-~~d~~t--~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~----~----------- 279 (406)
T 4adb_A 220 LIFDEVQTGVGRTGELYAY-MHYGV-TPDLLT--TAKALGGGFPVGALLAT-EECARVMTVGTH----G----------- 279 (406)
T ss_dssp EEEECTTTTTTTTSSSSHH-HHHTC-CCSEEE--ECGGGGTTSCCEEEEEC-HHHHHTCCTTSS----C-----------
T ss_pred EEEeccccCCCccchhHHH-HhcCC-CCCEEE--echhhcCCCCeEEEEEc-HHHHhhhccCCc----C-----------
Confidence 9999999854332221111 11222 467776 58999966678987764 444433211100 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC----CeEEecCCceeEEEEEeecCccCCC
Q psy12303 337 GDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD----KFYLILEPEMVNVSFWYLPTRVRNM 412 (480)
Q Consensus 337 ~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~----g~~~~~~~~~~~v~f~~~~~~~~~~ 412 (480)
..+ ....+...+++..+..-..++..++..++++++.+.|++ .. .+.-. ......+.+.+. ....
T Consensus 280 ~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~-~~~g~~~~~~~~-~~~~-- 348 (406)
T 4adb_A 280 TTY------GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNT-INHRYGLFSEV-RGLGLLIGCVLN-ADYA-- 348 (406)
T ss_dssp CSS------TTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHH-HHHHHCCEEEE-EEETTEEEEEEC-TTTT--
T ss_pred CCC------CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HHHhCCCceEE-EEEEEEEEEEEe-CCcH--
Confidence 000 112333333333221111156677778888888888876 31 12111 112233344332 1100
Q ss_pred chhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 413 PHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....++.+.|.++|+.+... + .+++|++ ++..+|++||++++++|++++++
T Consensus 349 ----------~~~~~~~~~l~~~gi~v~~~----~-~~~iRi~-~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 349 ----------GQAKQISQEAAKAGVMVLIA----G-GNVVRFA-PALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp ----------TCHHHHHHHHHHTTEECEES----S-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHCCcEEeec----C-CCeEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 00246778888888543332 2 5799998 88899999999999999987753
No 197
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.87 E-value=5.6e-20 Score=185.50 Aligned_cols=326 Identities=14% Similarity=0.053 Sum_probs=198.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHc
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~ 188 (480)
..+...++.++++++++.+...++|++|||+||..|+++++... ...|. +| +.+|+.....|.....+....
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~----~~~g~---~~~~~vi~~~~~yHg~~~~~~~~~ 167 (476)
T 3i5t_A 95 ATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYN----NVLGR---PQKKRIIVRYDGYHGSTALTAACT 167 (476)
T ss_dssp BCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTCCCCSSHHHHHTC
T ss_pred CCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEEcCCcCcCChhhcccc
Confidence 35667788899999997666689999999999999999998641 22332 22 334555555666655555443
Q ss_pred CCC---------CCCeEEeeCCCC--C-CCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 189 GLG---------TDNCVEVPSDKR--G-RLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 189 g~~---------~~~v~~v~~~~~--~-~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
|.. ...+..++.... . ..| +++|++++++.. ...+++|+++.++++.|.+.+ ++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~ 245 (476)
T 3i5t_A 168 GRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHA 245 (476)
T ss_dssp CCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHH
T ss_pred CChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHH
Confidence 321 113445543221 1 122 788998887531 123789999999999998665 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcc-cCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC---
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPR-LTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS--- 319 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~--- 319 (480)
+|.++|++||+++|+|++|+++......+.. . ..++ ..|++++ .|.++++ .+.|+++.+ +++.+......
T Consensus 246 ~l~~lc~~~gillI~DEv~~g~gr~G~~~~~-~~~~~v-~pdi~t~--sK~l~~G~~plg~v~~~-~~i~~~~~~~~~~~ 320 (476)
T 3i5t_A 246 RFKAICEKHDILYISDEVVTGFGRCGEWFAS-EKVFGV-VPDIITF--AKGVTSGYVPLGGLAIS-EAVLARISGENAKG 320 (476)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSCHH-HHTTCC-CCSEEEE--CGGGGTTSSCCEEEEEC-HHHHHTTSGGGCTT
T ss_pred HHHHHHHHcCCEEEEEecccCCccccCceee-ecccCC-Ccchhhh--hhhhcCCCcCeEEEEEC-HHHHHHHhcCCccc
Confidence 9999999999999999999976443322222 2 3344 5788875 4999887 688988874 44444322110
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCc
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPE 396 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~ 396 (480)
..+... .+.....+++.+++..+..-.-+++.++..++.+++.+.|++ + |.+..+ ++.
T Consensus 321 ~~~~~~-----------------~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~v~~v-~~~ 381 (476)
T 3i5t_A 321 SWFTNG-----------------YTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALAS-LRDLPGVAET-RSV 381 (476)
T ss_dssp CEECCC-----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT-TTTSTTEEEE-EEE
T ss_pred cccccc-----------------CCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhcCCCeEEE-Eec
Confidence 001100 111123444444444332111145667777888888888775 4 444443 233
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.+........ .+.. .......+.+.+.++|.++... .+++|++ ++..+|+++|++++++|+++
T Consensus 382 G~~~~i~~~~~~~~~~---~~~~-~~~~~~~~~~~l~~~Gv~v~~~------g~~iRi~-p~l~~t~e~i~~~l~~l~~~ 450 (476)
T 3i5t_A 382 GLVGCVQCLLDPTRAD---GTAE-DKAFTLKIDERCFELGLIVRPL------GDLCVIS-PPLIISRAQIDEMVAIMRQA 450 (476)
T ss_dssp TTEEEEEECCC--------CCHH-HHHHHHHHHHHHHHTTEECEEE------TTEEEEC-CCTTCCHHHHHHHHHHHHHH
T ss_pred CceeEEEEecCccccc---cccc-hhHHHHHHHHHHHHCCCEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHH
Confidence 4444454432210000 0000 0012346778888898554432 2699999 88999999999999999987
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 451 l~~ 453 (476)
T 3i5t_A 451 ITE 453 (476)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 198
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.87 E-value=1.1e-21 Score=192.03 Aligned_cols=293 Identities=13% Similarity=0.071 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC---chhHHHHHH
Q psy12303 111 ILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC---HYSVRSCAA 186 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~---h~s~~~~~~ 186 (480)
..+++++.+++++++|.+ +.++++++|||+|+..++.++ . |+ .|+++... |+++...+.
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~--------------gd-~Vl~~~~~y~~~~~~~~~~~ 119 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--K--------------PK-KVIHYLPELPGHPSIERSCK 119 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--C--------------CS-EEEEECSSSSCCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--C--------------CC-EEEEecCCCCccHHHHHHHH
Confidence 355677888889999983 356899999999999998865 2 35 67777773 555555677
Q ss_pred HcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEE-EEeccCCCccc-cccChHHHHHHHHHcCcEEEeecccc
Q psy12303 187 VCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFF-VNCTSGTTVLG-AFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 187 ~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~-v~~~~~~~~~G-~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
..|. +++.+ .|+++|+++ ++ ++++ |++++++|++| ...++++|.++|++||+++|+|++|+
T Consensus 120 ~~g~---~~~~v-------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~ 182 (374)
T 2aeu_A 120 IVNA---KYFES-------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASG 182 (374)
T ss_dssp HTTC---EEEEE-------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred HcCc---EEEEe-------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcc
Confidence 7777 66666 388888876 32 3889 99999999999 88999999999999999999999998
Q ss_pred cccc-cc-c--cccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCcc
Q psy12303 265 GGLL-LS-K--KYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKV 340 (480)
Q Consensus 265 ~~~~-~~-~--~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (480)
.+.. +. . .... ++|+++.|+||++++ .+.|+++.++ +..+...... ...
T Consensus 183 ~~~~~~~~~~~~~~~-------~~di~~~S~sK~l~g-~~~G~~~~~~-~~~~~l~~~~-~~~----------------- 235 (374)
T 2aeu_A 183 ARVRLLFNQPPALKL-------GADLVVTSTDKLMEG-PRGGLLAGKK-ELVDKIYIEG-TKF----------------- 235 (374)
T ss_dssp HHHHHHTTCCCHHHH-------TCSEEEEETTSSSSS-CSCEEEEEEH-HHHHHHHHHH-HTT-----------------
T ss_pred cccccccccCCcccc-------CCcEEEecCcccccC-cceEEEEECH-HHHHHHHHhh-ccc-----------------
Confidence 7641 11 1 1112 579999999999876 4788887654 4444332111 000
Q ss_pred ccCCCCCCchH---HHHHHHHhcHHHHHHHHHHHHHH----HHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCccC
Q psy12303 341 IQCGRHNDIFK---LWLQWRAKGDEGFEKQIDRLMEL----AEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTRVR 410 (480)
Q Consensus 341 ~~~~r~~~~l~---~~~~l~~~g~~~~~~~~~~~~~l----~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~~~ 410 (480)
+.....+. +..++..+..+.++...++...+ .+.+.+.|.. . +|+.+...|....+.+ .....
T Consensus 236 ---~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~~~~~~~g~~~~~-~~~~~-- 308 (374)
T 2aeu_A 236 ---GLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKA-IDDNINIVYERTPTGFVIKR-VYKDD-- 308 (374)
T ss_dssp ---TCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTT-TCTTEEEEEEECSSEEEEEE-EESSH--
T ss_pred ---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCcceeeCCceEEEEe-ecccc--
Confidence 00012223 33334433333344444444444 4666666665 4 4666644454433332 11110
Q ss_pred CCchhhHHHHhhhhhHHHHHH-HHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 411 NMPHEKRLNILGEITPILKGR-MMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~~-l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
... .. ...++... +.+.|+++.....+.+..+++|++++....++.+++++++.|++.+++
T Consensus 309 ------~~~-~~-~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 309 ------TIN-IK-KLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp ------HHH-HH-HHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred ------ccc-cc-chHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 000 00 01123333 345674443322222224689999655555666699999999887764
No 199
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.87 E-value=3.4e-20 Score=186.21 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
.....++++.++++++.+...+++|+|||+|+..++++++... +.+|.+ +++.+|+.+...|.+...++...|.
T Consensus 92 ~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~----~~~g~~--~~~~vi~~~~~yhg~~~~~~~~~g~ 165 (449)
T 3a8u_X 92 HPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYW----RLKGQA--TKTKMIGRARGYHGVNIAGTSLGGV 165 (449)
T ss_dssp CHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHH----HHTTCT--TCCEEEEETTCCCCSSHHHHHHCCC
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHH----HhcCCC--CCCEEEEECCCcCCCChhhhhccCC
Confidence 3455677888999988766789999999999999999887521 112210 2243454566667666666666542
Q ss_pred -------C--CCCeEEeeCCCCC-----CCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 191 -------G--TDNCVEVPSDKRG-----RLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 191 -------~--~~~v~~v~~~~~~-----~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
+ ...+..++.+..+ .+| +++|++++++.. ..++++|+++..++++|.+.| ++
T Consensus 166 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~~l~ 243 (449)
T 3a8u_X 166 NGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEGYLK 243 (449)
T ss_dssp HHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred hhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHHHHH
Confidence 1 1145566654321 256 999999997531 013788888877778999888 99
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccc
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYL 323 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l 323 (480)
+|.++|++||+++|+|++|+++......... ...++ ..|+++ ++|+++++ .++|++++++ ++.+.......+
T Consensus 244 ~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~-~~~~~-~~di~s--~sK~l~~G~~~~G~~~~~~-~~~~~l~~~~~~-- 316 (449)
T 3a8u_X 244 RNREICNQHNILLVFDEVITGFGRTGSMFGA-DSFGV-TPDLMC--IAKQVTNGAIPMGAVIAST-EIYQTFMNQPTP-- 316 (449)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSHH-HHHTC-CCSEEE--ECGGGGTTSSCCEEEEEEH-HHHHHHHTCSSC--
T ss_pred HHHHHHHHhCCEEEEeccccCccccCcchhh-hhcCC-CCCEEE--EcccccCCCCceEEEEECH-HHHHHhhccCcc--
Confidence 9999999999999999999654322111111 11222 467765 56999864 5689988764 444443321100
Q ss_pred cccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEec--CCceeEEE
Q psy12303 324 FMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLIL--EPEMVNVS 401 (480)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~--~~~~~~v~ 401 (480)
... ..+.. ..+.....+.+.+++..+..-.-++..++..++.+++.+.|++ +.++.++. ++...++.
T Consensus 317 ---~~~--~~~~~-----~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~~~~g~~~~ 385 (449)
T 3a8u_X 317 ---EYA--VEFPH-----GYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG-IKGAKNVIDIRNFGLAGA 385 (449)
T ss_dssp ---TTS--CSSCC-----CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT-TTTSTTEEEEEEETTEEE
T ss_pred ---ccc--ccccc-----cCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HhcCCCeEEEeeeEEEEE
Confidence 000 00000 0011123333333333221100124677888888999999887 43332111 23333444
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+.... ... . .. ..++.+.|.++|++ +.+. + +++|++ ++..+|+++|++++++|++++++
T Consensus 386 i~~~~~~-~~~---~----~~--~~~~~~~l~~~Gv~-v~~~---g--~~iRis-~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 386 IQIAPRD-GDA---I----VR--PFEAGMALWKAGFY-VRFG---G--DTLQFG-PTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp EEECCBT-TBS---S----HH--HHHHHHHHHHHTEE-CEEE---T--TEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCc-ccc---c----cc--HHHHHHHHHHCCcE-EecC---C--CEEEEE-CCCcCCHHHHHHHHHHHHHHHHH
Confidence 4332111 000 0 00 12466777788844 3332 2 689999 77889999999999999988764
No 200
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.87 E-value=1.2e-20 Score=189.39 Aligned_cols=350 Identities=11% Similarity=0.020 Sum_probs=211.1
Q ss_pred HHHHHHHHhhccCC-ccCCCCCccccccCCCChHHhHHHHHHHHc---CcCCcchhcChhhHHHHHHHHHHHHHHhCCC-
Q psy12303 54 QKLIDDCFTTLKYQ-VRTGHPMFMNQLSCGLDVVSMAGEWLIATA---NTNMFTYEIAPVFILMETVVLEKMRQIIGWQ- 128 (480)
Q Consensus 54 ~~i~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~- 128 (480)
-.+.+.++..-.+. +......|+++...+...+++. +...... ......|....+..++.+++.+++ +|.+
T Consensus 37 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~-~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~~~ 112 (448)
T 3meb_A 37 LNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVK-EAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGKDS 112 (448)
T ss_dssp HHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHH-HHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCTTC
T ss_pred HHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHH-HHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCCCc
Confidence 34444454433222 3345556666554444444444 4333332 122334444445555555544444 3776
Q ss_pred ----CCCeEE--CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHH----HcCCCCCCeEEe
Q psy12303 129 ----GGDSIL--APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAA----VCGLGTDNCVEV 198 (480)
Q Consensus 129 ----~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~v 198 (480)
++++++ |+|||+|+..++...... .||+ .|+++.++|.++...++ ..|. +++.+
T Consensus 113 ~~~~~~~i~~~~t~ggt~al~l~~~~~~~~------------~~gd-~Vlv~~p~~~~~~~~~~~~~~~~G~---~v~~~ 176 (448)
T 3meb_A 113 KAAQEGRIASCQSLSGTGSLHIGFEFLHLW------------MPKA-EFYMPSTTWPNHYGIYDKVFNKLKV---PYKEY 176 (448)
T ss_dssp HHHHTTCEEEEEESHHHHHHHHHHHHHHHH------------CTTC-CEEEESSCCTHHHHHHHHHHCTTTS---CCEEE
T ss_pred cccCcCcEEEEECCcHHHHHHHHHHHHHHh------------CCCC-EEEECCCCCHhHHHHHHhhHHhCCC---eEEEE
Confidence 578999 999999998754432211 1445 78888999999999999 8887 78889
Q ss_pred eC-CCC--CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcCcEEEeeccccccccccc-
Q psy12303 199 PS-DKR--GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSK- 271 (480)
Q Consensus 199 ~~-~~~--~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~- 271 (480)
|+ +++ +.+|+++|++++++. ...++++++++++||||.+.+ +++|+++|++||+++++|++|+++.....
T Consensus 177 ~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 177 TYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp CCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred eccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 98 654 899999999999752 123788999999999999977 55699999999999999999987654320
Q ss_pred --cccCcccCCCCCCccceeCccccCCCc-ccceEE--EE--------eCc----hhhHhhhcC-CcccccccccccCcc
Q psy12303 272 --KYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTI--HF--------KQD----GLLISCNQM-SAEYLFMQDKLYDVR 333 (480)
Q Consensus 272 --~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~--~~--------~~~----~~~~~~~~~-~~~~l~~~~~~~~~~ 333 (480)
......+.....-.+++.|++|.++.| .++|++ +. .++ .+....... ...+.
T Consensus 254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---------- 323 (448)
T 3meb_A 254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS---------- 323 (448)
T ss_dssp HHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS----------
T ss_pred cCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC----------
Confidence 000000101112235688999999853 567887 54 333 222211100 00000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcCC--CC------eEEecCCce
Q psy12303 334 YDTGDKVIQCGRHNDIFKLWLQWRAKGD--------EGFEKQIDRLMELAEYMVKKIKSMP--DK------FYLILEPEM 397 (480)
Q Consensus 334 ~~~~~~~~~~~r~~~~l~~~~~l~~~g~--------~~~~~~~~~~~~l~~~l~~~l~~~~--~g------~~~~~~~~~ 397 (480)
....+..+++...+.. +.++++.++..++++++.+.|++ . ++ +... .|+.
T Consensus 324 ------------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~~~~~-~~~~ 389 (448)
T 3meb_A 324 ------------MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAK-RKTPGPGSKGTWDHI-LTAI 389 (448)
T ss_dssp ------------SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCSTTTCCCTHH-HHCC
T ss_pred ------------CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCcCccccccee-CCCc
Confidence 0122333333333211 44677888889999999999998 5 44 4432 3556
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHH-HhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRM-MQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
+.++|...+ .+...++ .+.| +++.++ . .|+++. ..++++|++++++|+++
T Consensus 390 g~~~~~~~~-------------------~~~~~~ll~~~g-V~v~~G-----~--gRis~a--~~~~~~i~~~~~~l~~~ 440 (448)
T 3meb_A 390 GMFTFTGLT-------------------PEHVDYLKEKWS-IYLVKA-----G--GRMSMC--GLTESNCDYVAEAIHDA 440 (448)
T ss_dssp SSEEECCCC-------------------HHHHHHHHHHHC-EEECSG-----G--GEEEGG--GCCTTTHHHHHHHHHHH
T ss_pred eEEEecCCC-------------------HHHHHHHHHhCC-EEEeCC-----C--cEEEEe--cCCHHHHHHHHHHHHHH
Confidence 666662211 1233444 3456 444431 1 299953 23566799999999988
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 441 l~~ 443 (448)
T 3meb_A 441 VTK 443 (448)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 201
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.87 E-value=6.4e-20 Score=184.70 Aligned_cols=328 Identities=11% Similarity=0.027 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCC-ceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKG-QLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g-~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...+++++++++++.+.+.++||+|||+|+..++++++... ...|. || +.+|+.....|.....+....|
T Consensus 94 ~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~----~~~g~---~~~~~vi~~~~~yhg~~~~~~~~~~ 166 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYN----NVLGR---PEKKKIISRWRGYHGSGVMTGSLTG 166 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHH----HHTTC---TTCCEEEEETTCCCCSSHHHHHHCC
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHH----HhcCC---CCCCEEEEECCCcCCCCHHHhhccC
Confidence 4566778888999987666689999999999999999998631 12222 22 4344445555665555554433
Q ss_pred CC---------CCCeEEeeCCC-----CCCCC--------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----h
Q psy12303 190 LG---------TDNCVEVPSDK-----RGRLI--------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----I 243 (480)
Q Consensus 190 ~~---------~~~v~~v~~~~-----~~~~d--------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l 243 (480)
.. ...+..+|... +..++ +++|++++++. ...++++|+++..++++|.+.+ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~--~~~~~aaii~ep~~~~~G~~~~~~~~l 244 (460)
T 3gju_A 167 LDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE--GPETIAAFIGEPILGTGGIVPPPAGYW 244 (460)
T ss_dssp CGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHH
T ss_pred CcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHH
Confidence 21 12456666432 11233 58888888742 1123789999998888888766 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcC--Cc
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQM--SA 320 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~--~~ 320 (480)
++|.++|++||+++|+|++|+++......+.. ...++ ..|++++ .|.++++ .+.|+++.++ ++.+..... ..
T Consensus 245 ~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~-~~~~~-~pdi~t~--sK~l~gG~~~lg~v~~~~-~i~~~~~~~~~~~ 319 (460)
T 3gju_A 245 EKIQAVLKKYDVLLVADEVVTGFGRLGTMFGS-DHYGI-KPDLITI--AKGLTSAYAPLSGVIVAD-RVWQVLVQGSDKL 319 (460)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH-HHHTC-CCSEEEE--CGGGTTTSSCCEEEEEEH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcccccchH-hhcCC-CCCeeee--ehhhcCCCCCeEEEEECH-HHHHHHhcccccc
Confidence 99999999999999999999976433222111 12233 5677774 5999877 5889888754 343332110 00
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHH---HHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCc
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQ---WRAKGDEG-FEKQIDRLMELAEYMVKKIKSMPDKFYLILEPE 396 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~---l~~~g~~~-~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~ 396 (480)
..+.+. .+.....+...++ ++.+..+. ++...+....+.+.|.+.+.+ .+.+..+ ++.
T Consensus 320 ~~~~~~----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~~ 381 (460)
T 3gju_A 320 GSLGHG----------------WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGG-HKNVGEV-RGD 381 (460)
T ss_dssp CSCSCC----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT-STTEEEE-EEE
T ss_pred cccccC----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE-eee
Confidence 000000 0011233333333 33322222 233333333445555555566 5666554 333
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
...+.+.+........ .+.. -.....++.+.+.++|+++... . . .+++|++ ++..+|+++|++++++|+++
T Consensus 382 g~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~l~~~Gv~v~~~-~--~-~~~iRi~-~~~~~t~e~i~~~l~~l~~~ 452 (460)
T 3gju_A 382 GMLAAVEFVADKDDRV---FFDA-SQKIGPQVATALAASGVIGRAM-P--Q-GDILGFA-PPLCLTREQADIVVSKTADA 452 (460)
T ss_dssp TTEEEEEECSBTTTTB---CCCG-GGCHHHHHHHHHHHTTEECEEC-S--S-SCEEEEC-CCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEccCccccc---cccc-hHHHHHHHHHHHHHCCeEEecC-C--C-CCEEEEE-CCCCCCHHHHHHHHHHHHHH
Confidence 4444454432210000 0000 0011346778888998544432 2 2 4799999 88899999999999999987
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 453 l~~ 455 (460)
T 3gju_A 453 VKS 455 (460)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 202
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.87 E-value=8.9e-20 Score=183.06 Aligned_cols=325 Identities=11% Similarity=0.032 Sum_probs=182.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC-chhHHHHHHHc
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC-HYSVRSCAAVC 188 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~-h~s~~~~~~~~ 188 (480)
......+++++++++++.+...++||+|||+|+..|+++++... ...|.. .++ .|++.+.. |.+...+....
T Consensus 85 ~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~----~~~G~~--~~~-~vi~~~~~yhg~~~~~~~~~ 157 (448)
T 3dod_A 85 TNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYW----KNIGKP--EKQ-KFIAMKNGYHGDTIGAVSVG 157 (448)
T ss_dssp EEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHH----HHTTCT--TCC-EEEEEC--------------
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHH----HhhCCC--CCC-EEEEECCCCCCccHHHHHhc
Confidence 34566778899999987655679999999999999999998631 112210 014 55555444 54443333332
Q ss_pred CCC---------CCCeEEeeCCCCCCC-----------CHHHHHHHHHHHHHCCCccEEEEeccCC-CccccccC----h
Q psy12303 189 GLG---------TDNCVEVPSDKRGRL-----------IPSELERLVLERKAKGDIPFFVNCTSGT-TVLGAFDP----I 243 (480)
Q Consensus 189 g~~---------~~~v~~v~~~~~~~~-----------d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~~----l 243 (480)
|.. ...+..+|.+..++. |+++|+++++... .++++|+++..+ ++.|.+.+ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~~~~l 234 (448)
T 3dod_A 158 SIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMPEGYL 234 (448)
T ss_dssp ---------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECCTTHH
T ss_pred CCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCCHHHH
Confidence 211 113455665544443 4889999997321 237888888887 88887766 9
Q ss_pred HHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcC---C
Q psy12303 244 EEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQM---S 319 (480)
Q Consensus 244 ~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~---~ 319 (480)
++|.++|++||+++|+|++|+++......+.. ...++ ..|++++ .|.+++++ ++|+++.++ ++.+..... .
T Consensus 235 ~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~-~~~~~-~~di~t~--sK~l~~G~~~ig~v~~~~-~~~~~~~~~~~~~ 309 (448)
T 3dod_A 235 AGVRELCTTYDVLMIVDEVATGFGRTGKMFAC-EHENV-QPDLMAA--GKGITGGYLPIAVTFATE-DIYKAFYDDYENL 309 (448)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGG-GGGTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HHHHTTCSCGGGC
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcccchhhh-hhcCC-CCCEEEe--cccccCCcCceEEEEECH-HHHHHhhhccccC
Confidence 99999999999999999999975433222222 22333 4677764 59998774 889888654 444332210 0
Q ss_pred cccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh---cCCCCeEEecCCc
Q psy12303 320 AEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK---SMPDKFYLILEPE 396 (480)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~---~~~~g~~~~~~~~ 396 (480)
..+... .+.....+.+.+++..+..-.-+++.++..++.+++++.|. + .+.+..+ .+.
T Consensus 310 ~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~~~-~~~ 370 (448)
T 3dod_A 310 KTFFHG-----------------HSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHA-LPHVGDI-RQL 370 (448)
T ss_dssp CCCCCC-----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT-STTEEEE-EEE
T ss_pred Cccccc-----------------CCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEE-Eee
Confidence 001000 01112333344433333110112344555555555555554 4 4444432 233
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
..++.+.+.... .... ...... ....++.+.|.++|+++ .+. .+++|++ ++..+|+++|++++++|+++
T Consensus 371 g~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~~~~l~~~Gv~~-~~~-----~~~iRi~-~~~~~t~e~i~~~l~~l~~~ 439 (448)
T 3dod_A 371 GFMCGAELVRSK-ETKE--PYPADR-RIGYKVSLKMRELGMLT-RPL-----GDVIAFL-PPLASTAEELSEMVAIMKQA 439 (448)
T ss_dssp TTEEEEEECSBT-TTTB--CCCGGG-CHHHHHHHHHHHTTEEC-CEE-----TTEEEEC-CCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEccCc-cccc--ccchhh-HHHHHHHHHHHHCCcEE-ecc-----CCEEEEE-CCCCCCHHHHHHHHHHHHHH
Confidence 334444443211 0000 000000 01246778888888544 332 3699999 88999999999999999987
Q ss_pred hcc
Q psy12303 477 GHD 479 (480)
Q Consensus 477 ~~~ 479 (480)
+++
T Consensus 440 l~~ 442 (448)
T 3dod_A 440 IHE 442 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 203
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.86 E-value=6.7e-20 Score=182.81 Aligned_cols=317 Identities=12% Similarity=0.052 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHh-CCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 112 LMETVVLEKMRQII-GWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~-g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
....++++.+++++ |-.+.++++|+||++|+..++..++... + + +.+|+.+...|.+...++...|.
T Consensus 84 ~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~-------~----~-~~vi~~~p~y~~~~~~~~~~~g~ 151 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT-------K----R-SGTIAFSGAYHGRTHYTLALTGK 151 (426)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH-------T----C-CEEEEETTCCCCSSHHHHHHSSC
T ss_pred HHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhh-------C----C-CeEEEECCCcCCCchHhhhhcCC
Confidence 44456777788888 5122679999999999999998554310 0 3 33555566666666677777664
Q ss_pred C--------C--CCeEEeeCCC-----CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 191 G--------T--DNCVEVPSDK-----RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 191 ~--------~--~~v~~v~~~~-----~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
. . ..++.+|.+. ++.+|+++|++++++.. .+.++++|+++...+++|.+.+ +++|.++|+
T Consensus 152 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~ 230 (426)
T 1sff_A 152 VNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCD 230 (426)
T ss_dssp CTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHH
T ss_pred ccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHH
Confidence 2 0 1267788753 23478999999997410 0113778887654444997777 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+++|+|++|+++......... ...++ .+|++ +++|+++.+.++|++++++ ++...... ... .
T Consensus 231 ~~~~~li~De~~~~~~~~g~~~~~-~~~~~-~~di~--s~sK~~~~GlriG~~~~~~-~~~~~l~~---~~~-~------ 295 (426)
T 1sff_A 231 EHGIMLIADEVQSGAGRTGTLFAM-EQMGV-APDLT--TFAKSIAGGFPLAGVTGRA-EVMDAVAP---GGL-G------ 295 (426)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGG-GGTTS-CCSEE--EECGGGGTSSCCEEEEEEH-HHHTTSCT---TSB-C------
T ss_pred HcCCEEEEechhhccCcccchhhh-hhcCC-CCCEE--EEcccccCCCceEEEEEcH-HHHhhhcc---CCc-C------
Confidence 999999999999964322211111 11222 46766 4679998656689999765 33332211 000 0
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
.++ ........++..+++.+.. .+..++..++++++.+.|++. .+.+..+ ++....+.+.+.+..
T Consensus 296 -----~~~---~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 363 (426)
T 1sff_A 296 -----GTY---AGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDG 363 (426)
T ss_dssp -----CSS---SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGG
T ss_pred -----cCC---CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCc
Confidence 000 0001122233334444322 234566777777777777650 3434332 234445555443110
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
....... . ...++.+.|.++|+.+ .+... . .+++|++ ++..+++++|++++++|++++++
T Consensus 364 ~~~~~~~-----~--~~~~l~~~l~~~gi~v-~~~~~-~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 364 DHNKPDA-----K--LTAEIVARARDKGLIL-LSCGP-Y-YNVLRIL-VPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp CTTSBCH-----H--HHHHHHHHHHHTTEEC-EEEST-T-SCEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCh-----H--HHHHHHHHHHHCCcEE-ecCCC-C-CCEEEEE-CCccCCHHHHHHHHHHHHHHHHH
Confidence 0000000 0 1245677888888544 33222 1 4799999 77789999999999999987653
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.86 E-value=4.8e-20 Score=184.25 Aligned_cols=320 Identities=13% Similarity=0.080 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC-
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL- 190 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~- 190 (480)
....++++.+++++|.+..++++|+||++|+..++++++.. .| ++.+|+.....|.+...+....+.
T Consensus 85 ~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~-------~~-----~~~vi~~~~~yhg~~~~~~~~~~~~ 152 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLV-------TG-----KYEIVGFAQSWHGMTGAAASATYSA 152 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHH-------HT-----CCEEEEETTCCCCSSHHHHHTCCSS
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh-------hC-----CCeEEEECCCcCCCChhHHhhcCCc
Confidence 45567778899999987778999999999999999987642 11 133444555566666555544321
Q ss_pred -------CCCCeEEeeCCCCC------------CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHH
Q psy12303 191 -------GTDNCVEVPSDKRG------------RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIA 247 (480)
Q Consensus 191 -------~~~~v~~v~~~~~~------------~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~ 247 (480)
....+..++.+... .+|+++|++++++. ....+++|+++..++++|.+.+ +++|.
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 230 (433)
T 1zod_A 153 GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYMAALK 230 (433)
T ss_dssp CCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHHHHHH
T ss_pred cccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHH
Confidence 01245566553211 23689999998753 1123778887766688997765 99999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++|++||+++|+|++|+++......... ...++ ..|+++ +.|+++++.++|++++++ ++.+..... .+...
T Consensus 231 ~l~~~~~~~li~DEv~~~~g~~g~~~~~-~~~~~-~~di~s--~sK~~~~G~~ig~~~~~~-~~~~~~~~~--~~~~~-- 301 (433)
T 1zod_A 231 RKCEARGMLLILDEAQTGVGRTGTMFAC-QRDGV-TPDILT--LSKTLGAGLPLAAIVTSA-AIEERAHEL--GYLFY-- 301 (433)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTH-HHHTC-CCSEEE--ECHHHHTTSSCEEEEECH-HHHHHHHHT--TCCCC--
T ss_pred HHHHHhCCEEEEeccccCCCcCchHhHH-hhcCC-CCCEEE--ecccccCCCCeeEEEEhH-HHHHhhccC--CCCCC--
Confidence 9999999999999999965432221111 11123 467665 569998778899998764 444433221 01000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEe
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~ 404 (480)
.++ ++..+...++.++++.+.. ++..++..++++++.+.|++. .+.+..+ ++....+.+.+
T Consensus 302 ---------~t~---~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~ 365 (433)
T 1zod_A 302 ---------TTH---VSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEI 365 (433)
T ss_dssp ---------CTT---TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEE
T ss_pred ---------CCC---CcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEE
Confidence 000 0111112222333333222 234566777777777777650 2444432 33444454544
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
........... ....++.+.|.+.|++ +.+....+..+++|++ ++..+|+++|++++++|++++++
T Consensus 366 ~~~~~~~~~~~-------~~~~~~~~~l~~~Gv~-v~~~~~~~~~~~lRi~-~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 366 VKDRRTKEPAD-------GLGAKITRECMNLGLS-MNIVQLPGMGGVFRIA-PPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp EEETTTTEECT-------THHHHHHHHHHHTTEE-CCEECCTTSCCEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCccccCCCh-------HHHHHHHHHHHHCCCe-EeccCCCCCCCEEEEE-CCcCCCHHHHHHHHHHHHHHHHH
Confidence 32110000000 0124567788888854 3333222213799998 88889999999999999987754
No 205
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.86 E-value=3.7e-21 Score=189.90 Aligned_cols=308 Identities=13% Similarity=-0.036 Sum_probs=193.4
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhCCCCCCeEE--CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIGWQGGDSIL--APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
..|....+..++++.+.+++... +.+++++++ |+|||+|+..++.+++... ||+ .|+++.++|+
T Consensus 63 ~~y~~~~g~~~lr~~la~~~~~~-~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~------------~gd-~vl~~~p~~~ 128 (394)
T 2ay1_A 63 KTYAGLSGEPEFQKAMGELILGD-GLKSETTATLATVGGTGALRQALELARMAN------------PDL-RVFVSDPTWP 128 (394)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHGG-GCCGGGEEEEEEEHHHHHHHHHHHHHHHHC------------TTC-CEEEEESCCH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCC-CCCcccEEEEecCCchhHHHHHHHHHHhcC------------CCC-EEEEcCCCCh
Confidence 34544444556666655554221 225667888 9999999999998876420 345 6778888999
Q ss_pred hHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHcC
Q psy12303 180 SVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKYN 254 (480)
Q Consensus 180 s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~~ 254 (480)
++...+...|. +++.+|.+ +++.+|+++|++++++. ...++++++++++|+||.+.+ +++|.++|++||
T Consensus 129 ~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~ 202 (394)
T 2ay1_A 129 NHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTG 202 (394)
T ss_dssp HHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999888 78889885 56789999999998752 123678888999999999976 568899999999
Q ss_pred cEEEeecccccccccc--ccccCcccCCCCCCccceeCccccCCC-cccceEEEE--eCchhhHhhhcCCcccccccccc
Q psy12303 255 MWLHVDAAWGGGLLLS--KKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHF--KQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~--~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
+++++|++|+.+.... +......+.....-.+++.|++|+++. +.++|++++ .+++.+..............
T Consensus 203 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~--- 279 (394)
T 2ay1_A 203 ALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQT--- 279 (394)
T ss_dssp CEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT---
T ss_pred CEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhh---
Confidence 9999999998765421 000000011110123567789999984 456799887 34433221110000000000
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEEecCCcee
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G------DEGFEKQIDRLMELAEYMVKKIKSMPD---KFYLILEPEMV 398 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g------~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~~~~~~~~ 398 (480)
+ .+ ...+..+++...+ + .+.++++.++..++++++.+.|++ .. ++++. .|..+
T Consensus 280 ---------~--~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-~~~~g 343 (394)
T 2ay1_A 280 ---------Y--SF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRD-LSGSDRFGFV-AEHRG 343 (394)
T ss_dssp ---------T--SS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTSSTTTHH-HHCCS
T ss_pred ---------c--CC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCeeEE-cCCce
Confidence 0 00 1222333333222 1 246777888888999999999987 43 35543 34445
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
+++|...+ ...+...+.+.|+ .+.+ .+|++ ++ .++++++++++++|+++.
T Consensus 344 ~~~~~~~~------------------~~~~~~~l~~~gi-~v~~--------~~Ris-~~-~~~~~~i~~~~~~l~~~~ 393 (394)
T 2ay1_A 344 MFSRLGAT------------------PEQVKRIKEEFGI-YMVG--------DSRIN-IA-GLNDNTIPILARAIIEVG 393 (394)
T ss_dssp SEEECCCC------------------HHHHHHHHHHHCE-ECCT--------TCEEE-GG-GCCTTTHHHHHHHHHHHT
T ss_pred EEEeeCCC------------------HHHHHHHHHhCCE-EecC--------CCeEE-ee-cCCHhhHHHHHHHHHHcc
Confidence 55442111 1234455556673 3332 36999 44 478999999999998763
No 206
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.86 E-value=1.4e-19 Score=181.66 Aligned_cols=317 Identities=13% Similarity=0.053 Sum_probs=186.3
Q ss_pred hHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 110 FILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
..+...+++++++++++.+ ...++||+|||+||..|+++++.. .| ++.+|......|.....+....
T Consensus 102 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~-------~g-----~~~ii~~~~~yhG~~~~~~~~~ 169 (451)
T 3oks_A 102 PYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSH-------TH-----KPAVVAFDHAYHGRTNLTMALT 169 (451)
T ss_dssp CCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHH-------HC-----CCEEEEETTCCCCSSHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHh-------cC-----CCeEEEEcCCcCCccHHHHHhc
Confidence 3456677889999998753 357999999999999999998863 11 1334444555565555554443
Q ss_pred CCC----------CCCeEEeeCCCCC-----CC--------CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---
Q psy12303 189 GLG----------TDNCVEVPSDKRG-----RL--------IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP--- 242 (480)
Q Consensus 189 g~~----------~~~v~~v~~~~~~-----~~--------d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~--- 242 (480)
+.. ...+..+|....+ .+ +++.+++.+++.. .+..+++|+++..+++.|.+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~~~ 248 (451)
T 3oks_A 170 AKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPADG 248 (451)
T ss_dssp CCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTT
T ss_pred CCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCCHH
Confidence 321 1145667665211 01 2444555555321 1234778888887777777766
Q ss_pred -hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcc
Q psy12303 243 -IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAE 321 (480)
Q Consensus 243 -l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 321 (480)
+++|.++|++||+++|+|++|+++......... ...++ ..|+++ +.|.++++.++|+++.+ +++.+......
T Consensus 249 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~-~~~~~-~pdi~t--~sK~l~~G~~iG~v~~~-~~~~~~~~~~~-- 321 (451)
T 3oks_A 249 FLPTLLDWCRKNDVVFIADEVQTGFARTGAMFAC-EHEGI-DPDLIV--TAKGIAGGLPLSAVTGR-AEIMDSPHVSG-- 321 (451)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGG-GGGTC-CCSEEE--ECGGGGTTSSCEEEEEE-HHHHTCSCTTS--
T ss_pred HHHHHHHHHHHcCCEEEEEecccCCCccccchhh-hhcCC-CCCeee--ehhhhhCCcceEEEEEC-HHHHhhhcCCC--
Confidence 999999999999999999999875433222222 22233 567776 45999888889988764 34433221100
Q ss_pred cccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCCeEEecCCce
Q psy12303 322 YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIK----SMPDKFYLILEPEM 397 (480)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~----~~~~g~~~~~~~~~ 397 (480)
. . .+-....+...+++..+..-.-+++.++..++.+++++.|. + .+.+..+ ++..
T Consensus 322 -~-~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~-~~~G 380 (451)
T 3oks_A 322 -L-G-----------------GTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAE-DDRIGDV-RGRG 380 (451)
T ss_dssp -B-C-----------------CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-CTTEEEE-EEET
T ss_pred -c-C-----------------CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE-EEee
Confidence 0 0 01112334444444333110012344555555555555544 4 4555543 2334
Q ss_pred eEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhh
Q psy12303 398 VNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLG 477 (480)
Q Consensus 398 ~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~ 477 (480)
..+.+.+.... ....... ...++.+.+.++|+++... ... .+++|++ ++..+|+++|++++++|++++
T Consensus 381 ~~~~~~~~~~~-~~~~~~~-------~~~~~~~~l~~~Gv~v~~~-~~~--~~~iRi~-~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 381 AMIAMELVKAG-TTEPDAD-------LTKALCAGAHAAGVIVLSC-GTY--GNVVRFL-PPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp TEEEEEEBSTT-SCCBCHH-------HHHHHHHHHHHTTEECEEE-CTT--SCEEEEC-CCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCc-cCCCCHH-------HHHHHHHHHHhCCcEEecC-CCC--CCEEEEE-CCCCCCHHHHHHHHHHHHHHH
Confidence 44555443211 0000000 1246778888999554443 211 3689999 888999999999999999987
Q ss_pred cc
Q psy12303 478 HD 479 (480)
Q Consensus 478 ~~ 479 (480)
++
T Consensus 449 ~~ 450 (451)
T 3oks_A 449 RG 450 (451)
T ss_dssp HC
T ss_pred hh
Confidence 64
No 207
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.86 E-value=1.5e-21 Score=192.91 Aligned_cols=303 Identities=11% Similarity=-0.008 Sum_probs=194.0
Q ss_pred cchhcChhhHHHHHHHHHHHHHHhC--CCCCCeEE--CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC
Q psy12303 102 FTYEIAPVFILMETVVLEKMRQIIG--WQGGDSIL--APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC 177 (480)
Q Consensus 102 ~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~ 177 (480)
..|...++..++.+.+.+++.+..+ ++++++++ |+|||+|+..++.+++.. .||+ .|++..++
T Consensus 63 ~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~------------~~gd-~Vl~~~p~ 129 (396)
T 2q7w_A 63 KNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKN------------TSVK-RVWVSNPS 129 (396)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH------------SCCC-EEEEEESC
T ss_pred cCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHh------------CCCC-EEEEcCCC
Confidence 3454445556666665555533222 23567888 999999999998876531 0445 78888889
Q ss_pred chhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHH
Q psy12303 178 HYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQK 252 (480)
Q Consensus 178 h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~ 252 (480)
|+++...++..|. +++.+|.+ +++.+|+++|++++++. ..+++++++++++||||.+.+ +++|.++|++
T Consensus 130 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 203 (396)
T 2q7w_A 130 WPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVE 203 (396)
T ss_dssp CTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999887 78889885 56789999999998642 123788899999999999865 5689999999
Q ss_pred cCcEEEeecccccccccc--ccccCcccCCCCCCccceeCccccCCC-cccceEEEE--eCch----hhHhhhcC-Cccc
Q psy12303 253 YNMWLHVDAAWGGGLLLS--KKYRHPRLTGIERADSVTWNPHKLMGT-LLQCSTIHF--KQDG----LLISCNQM-SAEY 322 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~--~~~~~~~~~~~~~~D~~~~s~hK~~~~-p~~~g~~~~--~~~~----~~~~~~~~-~~~~ 322 (480)
||+++++|++|+.+.... +......+......++++.|++|.++. +.++|++++ .+++ +....... ...+
T Consensus 204 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (396)
T 2q7w_A 204 KGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANY 283 (396)
T ss_dssp HTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhcc
Confidence 999999999998765421 100000011111235778899999984 355799886 2442 22211100 0000
Q ss_pred ccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCCC---CeEE
Q psy12303 323 LFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--------DEGFEKQIDRLMELAEYMVKKIKSMPD---KFYL 391 (480)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--------~~~~~~~~~~~~~l~~~l~~~l~~~~~---g~~~ 391 (480)
. + ...+...++...+. .+.+++..++..++++++.+.|++ .. ++++
T Consensus 284 ~-------------------~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~ 340 (396)
T 2q7w_A 284 S-------------------N---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQE-KGANRDFSF 340 (396)
T ss_dssp S-------------------S---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH-TTCCSCCTH
T ss_pred C-------------------C---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcce
Confidence 0 0 12333333333331 246677788888999999999998 53 3665
Q ss_pred ecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHH
Q psy12303 392 ILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLT 471 (480)
Q Consensus 392 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~ 471 (480)
. .|..+.++|... . ...+...+.+.|+ ++.+ .+|+++. . .++++++++++
T Consensus 341 ~-~~~~~~~~~~~~----~--------------~~~~~~~l~~~gv-~v~~--------~~Ris~~-~-~~~e~i~~~~~ 390 (396)
T 2q7w_A 341 I-IKQNGMFSFSGL----T--------------KEQVLRLREEFGV-YAVA--------SGRVNVA-G-MTPDNMAPLCE 390 (396)
T ss_dssp H-HHCCSSEEECCC----C--------------HHHHHHHHHHHCE-ECCT--------TCEEEGG-G-CCTTTHHHHHH
T ss_pred e-cCCCceEEEecC----C--------------HHHHHHHHHhcCe-eecC--------CceEEEe-e-cCHHHHHHHHH
Confidence 3 355555554211 0 1134455556673 3332 2699944 3 38999999999
Q ss_pred HHHHh
Q psy12303 472 EMDRL 476 (480)
Q Consensus 472 ~l~~~ 476 (480)
+|+++
T Consensus 391 ~l~~~ 395 (396)
T 2q7w_A 391 AIVAV 395 (396)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99875
No 208
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.85 E-value=9e-19 Score=175.78 Aligned_cols=318 Identities=12% Similarity=0.034 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc
Q psy12303 110 FILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC 188 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~ 188 (480)
..+...+++++++++++.+ ...++||+|||+||..|+++++.. .| ++.+|+.....|.....+....
T Consensus 105 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~-------~g-----~~~ii~~~~~yhg~~~~~~~~~ 172 (453)
T 4ffc_A 105 PYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLA-------TG-----RPAVVAFDNAYHGRTNLTMALT 172 (453)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH-------HC-----CCEEEEETTCCCCSSHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHh-------cC-----CCEEEEEcCccCCcchHHHhhc
Confidence 3466678889999999754 357999999999999999998753 11 1334555555666655555543
Q ss_pred CCC----------CCCeEEeeCCC----CCCCC-HHHHHHHHHHHHH--CCCccEEEEeccCCCccccccC----hHHHH
Q psy12303 189 GLG----------TDNCVEVPSDK----RGRLI-PSELERLVLERKA--KGDIPFFVNCTSGTTVLGAFDP----IEEIA 247 (480)
Q Consensus 189 g~~----------~~~v~~v~~~~----~~~~d-~~~L~~~i~~~~~--~~~~~~~v~~~~~~~~~G~~~~----l~~I~ 247 (480)
+.. ...+..+|... ...++ .+.++..++.-.+ ....+++|+++..++..|.+.+ +++|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~ 252 (453)
T 4ffc_A 173 AKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLT 252 (453)
T ss_dssp CCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred CCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHH
Confidence 321 11456666642 11233 2333322222111 1223677777777666677765 99999
Q ss_pred HHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 248 DICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 248 ~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++|++||+++|+|++|.++......... ...++ ..|++++ .|.++++.++|+++.+ +++.+...... . .
T Consensus 253 ~l~~~~~~llI~DEv~~g~g~~g~~~a~-~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~-~~i~~~~~~~~---~-~-- 321 (453)
T 4ffc_A 253 AWASENGVVFIADEVQTGFARTGAWFAS-EHEGI-VPDIVTM--AKGIAGGMPLSAVTGR-AELMDAVYAGG---L-G-- 321 (453)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSTH-HHHTC-CCSEEEE--CGGGGTTSSCEEEEEE-HHHHTTSCTTS---S-C--
T ss_pred HHHHHcCCEEEEecCccCCCcccccchh-hhcCC-CcchHhh--hhhhcCCcCeEEEEEC-HHHHhhhcccC---c-C--
Confidence 9999999999999999876433222111 12233 5677764 5999877889998764 44443221100 0 0
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCCeEEecCCceeEEEEE
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKI----KSMPDKFYLILEPEMVNVSFW 403 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l----~~~~~g~~~~~~~~~~~v~f~ 403 (480)
.+-....+...+++..+..-.-+++.++..++.+++++.| .+ ++.+..+ ++....+.+.
T Consensus 322 ---------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~-~~~g~~~~~~ 384 (453)
T 4ffc_A 322 ---------------GTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEE-VDIIGEV-RGRGAMLAIE 384 (453)
T ss_dssp ---------------CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-CSSEEEE-EEETTEEEEE
T ss_pred ---------------CCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE-EeeceEEEEE
Confidence 0011233444444333311111234445555555555544 44 5655543 2334444454
Q ss_pred eecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 404 YLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.... ....... ...++.+.+.++|+++.. .... .+++|++ ++..+|+++|++++++|++++++
T Consensus 385 ~~~~~-~~~~~~~-------~~~~~~~~l~~~Gv~v~~-~~~~--~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 385 IVKPG-TLEPDAA-------LTKSIAAEALSQGVLILT-CGTF--GNVIRLL-PPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp EBCTT-SCCBCHH-------HHHHHHHHHHHTTEECCE-ECTT--SCEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCc-ccCCCHH-------HHHHHHHHHHhCCCEEec-CCCC--CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 43211 0000000 134677888889854433 2222 3699999 88899999999999999988754
No 209
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.85 E-value=1.2e-20 Score=192.93 Aligned_cols=361 Identities=11% Similarity=0.054 Sum_probs=214.3
Q ss_pred hHHhHHHHHHHHcCcCCcchhcChhhHHHHHHHHHHHHHHhC--CC---CCCeEECCChhHHHHHHHHHHHHhcCchhHh
Q psy12303 85 VVSMAGEWLIATANTNMFTYEIAPVFILMETVVLEKMRQIIG--WQ---GGDSILAPGGSISNLYAFLAARHKMFPTYKE 159 (480)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~---~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~ 159 (480)
++.++.++....... ..+....+..++++++.+++.+..+ .+ +.++++|+|+|+|+..++.++..+.+
T Consensus 117 ~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l----- 189 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHL----- 189 (533)
T ss_dssp HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTS-----
T ss_pred CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhc-----
Confidence 556665665555432 1122445667888998888877733 22 35799999999999999887432211
Q ss_pred cCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC----CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCC
Q psy12303 160 KGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD----KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTT 235 (480)
Q Consensus 160 ~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~----~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~ 235 (480)
..||+ .|+++.++|.++..++...|. +++.++++ .++.+|+++|++++++. +++|++++++|
T Consensus 190 ----~~~gd-~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~N 255 (533)
T 3f6t_A 190 ----LKKGD-KIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTN 255 (533)
T ss_dssp ----SCTTC-EEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCT
T ss_pred ----cCCcC-EEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCC
Confidence 01556 889999999999988888887 77888875 35789999999988654 89999999999
Q ss_pred ccccccChH---HHHHHHH-HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCch
Q psy12303 236 VLGAFDPIE---EIADICQ-KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDG 310 (480)
Q Consensus 236 ~~G~~~~l~---~I~~i~~-~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~ 310 (480)
|+|.+.+.+ +|+++|+ +||+++++|++|+.+...... ......+.++++.|++|.++.| ..+|++++++..
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~----~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 331 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKS----IYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKN 331 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCC----HHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccC----HhhcCCCCEEEEecCcccCCCcccceEEEEECcHH
Confidence 999998765 7888888 689999999999976542111 1111124568888999999843 568999987764
Q ss_pred hhHhhhcCCcc---------cc--cccccccC-------cccCCCCccccCCCCCCchHHHH----HHHHh--------c
Q psy12303 311 LLISCNQMSAE---------YL--FMQDKLYD-------VRYDTGDKVIQCGRHNDIFKLWL----QWRAK--------G 360 (480)
Q Consensus 311 ~~~~~~~~~~~---------~l--~~~~~~~~-------~~~~~~~~~~~~~r~~~~l~~~~----~l~~~--------g 360 (480)
.........++ |- ........ .......... . ........+ ++..+ .
T Consensus 332 ~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~-~--~~~~~~q~a~a~~a~~~L~~~~g~~~~ 408 (533)
T 3f6t_A 332 VFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHT-A--GLSTPQQIMEALFSMTHLLTSTNGGSD 408 (533)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGG-C--SCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred HHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcc-c--CCChHHHHHHHHHHHHHHhhhccccch
Confidence 33222111110 00 00000000 0000000000 0 011111111 23322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh--hhhHHHHHHHH-hccc
Q psy12303 361 DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG--EITPILKGRMM-QAGT 437 (480)
Q Consensus 361 ~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~--~~~~~i~~~l~-~~g~ 437 (480)
...++++.++..+.++++.+.|.- ++.+ ..|..+.+++...+.........++...+. ....++..++. +.|+
T Consensus 409 ~~~~~~~~~~~~~r~~~l~~~L~~---~~~~-~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV 484 (533)
T 3f6t_A 409 DPYIDIARKLVSERYDQLHDAMQA---PKDE-TDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGV 484 (533)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC---CCCC-STTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---Cccc-cCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCE
Confidence 356677788888889999998852 4543 356666666543221000000000000000 00123444444 5575
Q ss_pred EEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 438 MMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 438 ~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
.+.+...+....+++|+++.+ .++++|++++++|.+++++
T Consensus 485 ~v~pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 485 VLVDGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp SSCTTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHH
Confidence 443322222225799999533 5799999999999988754
No 210
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.85 E-value=5.1e-20 Score=181.32 Aligned_cols=217 Identities=14% Similarity=0.080 Sum_probs=157.3
Q ss_pred HHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH-----cC
Q psy12303 115 TVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-----CG 189 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-----~g 189 (480)
.++.+.++++.|.+ .+++++||++|+..+ ..... ||+ .|+++...|.+....+.. .|
T Consensus 70 ~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~--------------~gd-~Vi~~~~~y~~~~~~~~~~~~~~~g 131 (400)
T 3nmy_A 70 FAYERCVAALEGGT--RAFAFASGMAATSTV-MELLD--------------AGS-HVVAMDDLYGGTFRLFERVRRRTAG 131 (400)
T ss_dssp HHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSC--------------TTC-EEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred HHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcC--------------CCC-EEEEeCCCchHHHHHHHHhhHhhcC
Confidence 34555688888886 478888889988763 22211 456 788888888866665443 47
Q ss_pred CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccccc
Q psy12303 190 LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGLLL 269 (480)
Q Consensus 190 ~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~~~ 269 (480)
+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|.++|++||+++++|++|+.+...
T Consensus 132 ~---~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~ 197 (400)
T 3nmy_A 132 L---DFSFVDLT-----DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ 197 (400)
T ss_dssp C---EEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC
T ss_pred e---EEEEECCC-----CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 6 78888876 899999998765 899999999999999999999999999999999999999866543
Q ss_pred cccccCcccCCCCCCccceeCccccCCCcc-cc-e-EEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 270 SKKYRHPRLTGIERADSVTWNPHKLMGTLL-QC-S-TIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 270 ~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~-g-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
.+. .. ++|+++.|++|++++|. .. | +++++++.+......... . .+..
T Consensus 198 ~~~-~~-------g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~-~--------------------~g~~ 248 (400)
T 3nmy_A 198 RPL-SL-------GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN-S--------------------IGGV 248 (400)
T ss_dssp CGG-GG-------TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHH-H--------------------HCCB
T ss_pred Chh-hc-------CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHH-h--------------------cCCC
Confidence 222 23 78999999999999773 33 4 455556554443221100 0 1111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 347 NDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 347 ~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
...+.+|+.++. .+.+..+.++..+++.++.+.|++ .|.+.-+..|
T Consensus 249 ~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~-~p~v~~V~~p 294 (400)
T 3nmy_A 249 QGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLET-HPAIEKVIYP 294 (400)
T ss_dssp CCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTT-CTTEEEEECT
T ss_pred CCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHc-CCCEeEEECC
Confidence 345667777665 455677888999999999999999 8888765433
No 211
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.84 E-value=6.6e-20 Score=180.84 Aligned_cols=222 Identities=12% Similarity=0.086 Sum_probs=160.0
Q ss_pred HHHHHHHHHHhCCCCCCeEE---CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC-CCchhHHHHH-----
Q psy12303 115 TVVLEKMRQIIGWQGGDSIL---APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD-QCHYSVRSCA----- 185 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~---t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~-~~h~s~~~~~----- 185 (480)
.++.+.+++++|.+. .++ ++|||+||..++.+..+ ||+ .|+++. ..|......+
T Consensus 76 ~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~--------------pGD-~Vl~~~~~~y~~~~~~~g~~~~ 138 (427)
T 3i16_A 76 DSLDAVYARVFNTES--ALVRPHFVNGTHALGAALFGNLR--------------PGN-TMLSVCGEPYDTLHDVIGITEN 138 (427)
T ss_dssp HHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHHCC--------------TTC-EEEESSSSCCGGGHHHHTCSCC
T ss_pred HHHHHHHHHHhCCcc--eEEeCCCccHHHHHHHHHHHHhC--------------CCC-EEEEeCCCccHHHHHHHhcccc
Confidence 344566999999976 355 89999999988887643 556 777776 7787666433
Q ss_pred ------HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHH--HHHHCCCccEEEEecc----CCCccccccChHHHHHHHHH-
Q psy12303 186 ------AVCGLGTDNCVEVPSDKRGRLIPSELERLVL--ERKAKGDIPFFVNCTS----GTTVLGAFDPIEEIADICQK- 252 (480)
Q Consensus 186 ------~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~--~~~~~~~~~~~v~~~~----~~~~~G~~~~l~~I~~i~~~- 252 (480)
...|+ +++.++.+++|.+|+++|+++++ ++ |++|++++ ++|++|.+.|+++|+++|++
T Consensus 139 ~~~~~l~~~G~---~~~~v~~~~~g~~D~e~l~~~l~~~~~------tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~ 209 (427)
T 3i16_A 139 SNMGSLKEFGI---NYKQVDLKEDGKPNLEEIEKVLKEDES------ITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNI 209 (427)
T ss_dssp CSSCCTGGGTC---EEEECCCCTTSSCCHHHHHHHHHTCTT------EEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEecCccCCCcCHHHHHHHhhCCCC------CEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHh
Confidence 33455 78899998889999999999998 44 89999999 99999999999999999999
Q ss_pred -cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcC-Cccccccccc
Q psy12303 253 -YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQM-SAEYLFMQDK 328 (480)
Q Consensus 253 -~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~ 328 (480)
+|+++++|++|+.+......... ++|+++.|+||+++++. ..|+++ .++++.+..... ....+..
T Consensus 210 ~~g~~livD~a~~~~~~~~~p~~~-------gaDiv~~S~sK~lgg~g~~~gG~i~-~~~~li~~l~~~~~~~~~g~--- 278 (427)
T 3i16_A 210 RKDIICFVDNCYGEFMDTKEPTDV-------GADLIAGSLIKNIGGGIAPTGGYLA-GTKDCIEKTSYRLTVPGIGG--- 278 (427)
T ss_dssp CTTSEEEEECTTTTTSSSSCGGGG-------TCSEEEEETTSGGGTTTCCSCEEEE-ECHHHHHHHHHHHSCTTTGG---
T ss_pred CCCCEEEEECCCccccccCCcccc-------CCeEEEecCcccCCCCCCceEEEEE-ECHHHHHHHHHhcccCccCc---
Confidence 99999999999877643332233 78999999999998642 235555 456555544321 1111100
Q ss_pred ccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 329 LYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..+-.+. ..|+.++. ......+.++..+++.++.+.|++ + ++++.
T Consensus 279 -------------~~~~~~~--~a~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~-~-g~~V~ 323 (427)
T 3i16_A 279 -------------ECGSTFG--VVRSMYQG--LFLAPHISMEALKGAILCSRIMEL-A-GFEVM 323 (427)
T ss_dssp -------------GCCCCTT--CHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-T-TCEEE
T ss_pred -------------cCCccHH--HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh-C-CCeec
Confidence 0010011 14555443 455678889999999999999999 4 66774
No 212
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=3.9e-20 Score=181.94 Aligned_cols=223 Identities=9% Similarity=0.020 Sum_probs=160.1
Q ss_pred HHHHHHHHHHhCCCCCCeEE---CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC-CCchhHHHHH-----
Q psy12303 115 TVVLEKMRQIIGWQGGDSIL---APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD-QCHYSVRSCA----- 185 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~---t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~-~~h~s~~~~~----- 185 (480)
.++.+.+++++|.+. .++ ++|||+||..++.+... ||+ .|+++. ..|......+
T Consensus 62 ~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~--------------~GD-~Vl~~~~~~y~~~~~~~~~~g~ 124 (409)
T 3jzl_A 62 DTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGILR--------------PDD-ELLYITGQPYDTLEEIVGIRKQ 124 (409)
T ss_dssp HHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHHCC--------------TTC-EEEECSSSCCTTHHHHHTSSSS
T ss_pred HHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHhcC--------------CCC-EEEEeCCCCcHhHHHHHhcccc
Confidence 345566899999875 455 89999999998887643 556 777776 7888777544
Q ss_pred -----HHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEecc----CCCccccccChHHHHHHHHH--cC
Q psy12303 186 -----AVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTS----GTTVLGAFDPIEEIADICQK--YN 254 (480)
Q Consensus 186 -----~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~~l~~I~~i~~~--~~ 254 (480)
...|+ +++.++.+++|.+|+++|+++++++ |++|++++ ++|++|.+.|+++|.++|++ +|
T Consensus 125 ~~~~l~~~G~---~~~~v~~~~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~ 195 (409)
T 3jzl_A 125 GQGSLKDFHI---GYSSVPLLENGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPE 195 (409)
T ss_dssp SSSCTGGGTC---EEEECCCCTTSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTT
T ss_pred hhhHHHHcCC---EEEEeCCCCCCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCC
Confidence 33455 7889999888999999999999764 89999999 99999999999999999999 99
Q ss_pred cEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc-cceEEEEeCchhhHhhhcC-CcccccccccccCc
Q psy12303 255 MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL-QCSTIHFKQDGLLISCNQM-SAEYLFMQDKLYDV 332 (480)
Q Consensus 255 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~-~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~ 332 (480)
+++|+|++|+.+......... ++|+++.|+||+++++. ..|.+++.++++.+..... ..+++...
T Consensus 196 ~~livD~a~~~~~~~~~p~~~-------g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~------ 262 (409)
T 3jzl_A 196 VIVFVDNCYGEFVEYQEPPEV-------GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGRE------ 262 (409)
T ss_dssp CEEEEECTTCTTTSSCCSGGG-------TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGG------
T ss_pred CEEEEeCCcccccccCCcccc-------CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccccccc------
Confidence 999999999877633222233 78999999999998753 2334444566665544321 11111000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
.+..... .++.++. ......++++..+++.++.+.|++ .|+++.
T Consensus 263 ----------~g~~~~~--~~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~--~g~~v~ 306 (409)
T 3jzl_A 263 ----------AGASLYS--LLEMYQG--FFLAPHVTAQAIKGARFTAAMLAE--FGVEAD 306 (409)
T ss_dssp ----------CCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH--TTCEEE
T ss_pred ----------ccccHHH--HHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHh--CCCccc
Confidence 0100111 2333333 455677888999999999999999 467774
No 213
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.84 E-value=4.8e-20 Score=183.95 Aligned_cols=315 Identities=14% Similarity=0.068 Sum_probs=180.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
......+++++++++++ +...++|++|||+|+..+++.++.. .| + +.+|+.....|.....+....+
T Consensus 90 ~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~a~~~-------~~----~-~~vi~~~~~yhg~~~~~~~~~~ 156 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRIMRAY-------TG----R-DKIIKFEGCYHGHADMFLVKAG 156 (427)
T ss_dssp CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHH-------HC----C-CEEEEEETCCCCSCGGGCSSCC
T ss_pred CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHh-------hC----C-CEEEEECCCcCCCCHHHHHhcC
Confidence 34666788899999987 5568999999999999999888753 11 1 3245555555543332221111
Q ss_pred CC-----------C-----CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHH
Q psy12303 190 LG-----------T-----DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADI 249 (480)
Q Consensus 190 ~~-----------~-----~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i 249 (480)
.+ . ..+..+|.+ |+++|++++++. +..+++|+++..++++|.+.+ +++|.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l 228 (427)
T 3fq8_A 157 SGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREI 228 (427)
T ss_dssp THHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred CcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHH
Confidence 10 0 124455544 899999999763 123889999999999999988 9999999
Q ss_pred HHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccc
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKL 329 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (480)
|++||+++|+|++|+++ ........ ...++ ..|++++ .|.++++.++|+++. ++++++...... .+...
T Consensus 229 ~~~~~~~li~DEv~~g~-~~g~~~~~-~~~~~-~~di~t~--sK~~~~G~~~G~~~~-~~~~~~~~~~~~-~~~~~---- 297 (427)
T 3fq8_A 229 TLEHDALLVFDEVITGF-RIAYGGVQ-EKFGV-TPDLTTL--GKIIGGGLPVGAYGG-KREIMQLVAPAG-PMYQA---- 297 (427)
T ss_dssp HHHTTCEEEEECTTTBT-TTBTTHHH-HHTTC-CCSEEEE--CGGGGTTSSCEEEEE-CHHHHTTBTTTS-SBCCC----
T ss_pred HHHcCCEEEEecccccc-ccCcchhh-HhcCC-CCChhhh--hhhhhCCcceEEEEE-cHHHHHhhccCC-Ccccc----
Confidence 99999999999999965 32221111 12233 4677665 499987777898875 455444322110 01100
Q ss_pred cCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeec
Q psy12303 330 YDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 330 ~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~ 406 (480)
.+.....+.+.+++..+..-.-+++.++..++.+++++.|++ . .++....+.....+.+.+..
T Consensus 298 -------------~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~g~~~~~~~~~ 363 (427)
T 3fq8_A 298 -------------GTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLA-IAQETGHAACGGQVSGMFGFFFTE 363 (427)
T ss_dssp -------------CTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH-HHHHTTCCCEEEEETTEEEEESSS
T ss_pred -------------CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HHHhCCCCeEEEEeeeEEEEEEec
Confidence 011123344444443321100034455666666666666554 2 12211111223344444322
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
....+. ......-.....++.+.|.++|+++ .+. + ..|++ .+..+|++||++++++|+++++++
T Consensus 364 ~~~~~~--~~~~~~~~~~~~~l~~~l~~~Gi~v-~~~---~---~~r~~-~~~~~t~e~i~~~l~~l~~~l~~~ 427 (427)
T 3fq8_A 364 GPVHNY--EDAKKSDLQKFSRFHRGMLEQGIYL-APS---Q---FEAGF-TSLAHTEEDIDATLAAARTVMSAL 427 (427)
T ss_dssp CCCCSH--HHHTTSCHHHHHHHHHHHHHTTEEC-CSS---T---TSCEE-CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred Cccccc--cccccccHHHHHHHHHHHHHCCcEE-ecC---C---CCCEE-eeCcCCHHHHHHHHHHHHHHHHhC
Confidence 111100 0000000001246778888888443 321 1 12555 567889999999999999987653
No 214
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.7e-19 Score=180.29 Aligned_cols=312 Identities=12% Similarity=0.090 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....+++++++++++ +...++|++|||+|+..++++++.. . +++.+|+.....|.....+....|.+
T Consensus 95 ~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~~a~~~-------~-----~~~~vi~~~~~yhg~~~~~~~~~g~~ 161 (434)
T 3l44_A 95 ALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIRVARAY-------T-----GRTKIMKFAGCYHGHSDLVLVAAGSG 161 (434)
T ss_dssp HHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHHHHHHH-------H-----CCCEEEEETTCCCCSSGGGGBC----
T ss_pred HHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHHh-------h-----CCCEEEEEcCccCCCcHHHHhhcCCc
Confidence 445567778888887 4568999999999999999998763 1 12434444444454433332222211
Q ss_pred C----------------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 192 T----------------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 192 ~----------------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
. ..+..+|.+ |+++|++++++.. ..+++|+++..++++|.+.| +++|.++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 233 (434)
T 3l44_A 162 PSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVH 233 (434)
T ss_dssp ---CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHH
Confidence 0 033444433 8999999998642 12788899888888888887 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||++||+|++|.++ ........ ...++ ..|+++ +.|.++++.++|+++. ++++.+........+..
T Consensus 234 ~~~illI~DEv~~g~-~~g~~~~~-~~~~~-~~di~t--~sK~~~~G~~iG~~~~-~~~i~~~~~~~~~~~~~------- 300 (434)
T 3l44_A 234 EAGALVIYDEVITAF-RFMYGGAQ-DLLGV-TPDLTA--LGKVIGGGLPIGAYGG-KKEIMEQVAPLGPAYQA------- 300 (434)
T ss_dssp TTTCEEEEECTTTTT-TSSSSCHH-HHHTC-CCSEEE--EEGGGGTTSSCEEEEE-CHHHHTTBTTTSSBCCC-------
T ss_pred HcCCEEEEeccccce-eccccHHH-HHcCC-CCCeee--hhhhhcCCcCeeeEEE-cHHHHHhhccCCCcccC-------
Confidence 999999999999876 32221111 12233 467666 5699888889999865 44444332211001110
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
.+.....+.+.+++..+..-.-+++.++..++.+++++.|++. .+.+..+ ++....+.+.+....
T Consensus 301 -----------~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 368 (434)
T 3l44_A 301 -----------GTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYFTTNT 368 (434)
T ss_dssp -----------CTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEESSSC
T ss_pred -----------CCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEEecCc
Confidence 0111233344433333211000344556666666666666540 2322222 233444555443222
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
..+. ......-.....++.+.|.++|++ +.+. + ...+|++ ..+|++|+++++++|++++++
T Consensus 369 ~~~~--~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~-~~~~rl~---~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 369 IEDY--DAAQDTDGEMFGKFFKLMLQEGVN-LAPS---K-YEAWFLT---TEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp CCSH--HHHHHSCHHHHHHHHHHHHHTTEE-CCSS---T-TCCEECC---TTCCHHHHHHHHHHHHHHHHH
T ss_pred ccch--hhccccCHHHHHHHHHHHHHCCeE-Eeec---C-CCcEEEe---cccCHHHHHHHHHHHHHHHHH
Confidence 1110 000000001124577888888844 3331 2 3467865 567999999999999988753
No 215
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.83 E-value=1.9e-19 Score=180.48 Aligned_cols=319 Identities=11% Similarity=0.062 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIG-WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g-~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g 189 (480)
.+...++.+.++++++ .+.++++|++|||+||..++++++..........|....+|+.+|+.....|.....+....|
T Consensus 100 ~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~ 179 (449)
T 2cjg_A 100 SVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTN 179 (449)
T ss_dssp CHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCC
T ss_pred CHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcC
Confidence 3455667788889887 455689999999999999999886321000000111111135344444445654333222222
Q ss_pred --------CC--CCCeEEeeCCC--CC--------CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHH
Q psy12303 190 --------LG--TDNCVEVPSDK--RG--------RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEE 245 (480)
Q Consensus 190 --------~~--~~~v~~v~~~~--~~--------~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~ 245 (480)
.. ...+..+|.++ .. ..++++|++++++. +.++++|+++..++++|.+.+ +++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~ 256 (449)
T 2cjg_A 180 TKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAA 256 (449)
T ss_dssp SCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHH
T ss_pred CchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHH
Confidence 21 12566777654 11 24566688888642 234889998888889998766 999
Q ss_pred HHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccc
Q psy12303 246 IADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFM 325 (480)
Q Consensus 246 I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~ 325 (480)
|.++|++||+++|+|++|++.......+.. ...++ ..|+++ +.|++ ++|++++++ ++...... .++..
T Consensus 257 l~~l~~~~g~lli~DEv~~g~g~~g~~~~~-~~~~~-~~di~t--~sK~l----~iG~~~~~~-~~~~~l~~---~~~~~ 324 (449)
T 2cjg_A 257 MRELCDEFDALLIFDEVQTGCGLTGTAWAY-QQLDV-APDIVA--FGKKT----QVCGVMAGR-RVDEVADN---VFAVP 324 (449)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSSTH-HHHTC-CCSEEE--ECGGG----SSEEEEECG-GGGGSTTC---TTTST
T ss_pred HHHHHHHCCcEEEEeccccCCCccCcceee-cccCC-CceEEE--ecCcc----cEEEEEECH-HHhhhhhh---cccCC
Confidence 999999999999999999965332221111 11233 568776 45988 478888754 44432110 01000
Q ss_pred cccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCC-eEEecCCceeEEE
Q psy12303 326 QDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDK-FYLILEPEMVNVS 401 (480)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g-~~~~~~~~~~~v~ 401 (480)
. . ...++ ++..+...++.++++.+.. +++.++..++.+++.+.|++. .+. +..+ ++...++.
T Consensus 325 ~-~------~~~t~---~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~ 390 (449)
T 2cjg_A 325 S-R------LNSTW---GGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCA 390 (449)
T ss_dssp T-S------SCCSS---SSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEE
T ss_pred c-c------cccCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEE
Confidence 0 0 00000 1111122233333433222 345677778888888888750 344 5433 23444444
Q ss_pred EEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 402 FWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 402 f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+.+. .. . ...++.+.|.++|+++ .+. + .+++|++ ++..+|+++|++++++|++++++
T Consensus 391 ~~~~-~~-------~-------~~~~~~~~l~~~Gv~v-~~~---g-~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 391 FSLP-TT-------A-------DRDELIRQLWQRAVIV-LPA---G-ADTVRFR-PPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EECS-SH-------H-------HHHHHHHHHHHTTEEC-EEE---T-TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEC-Ch-------H-------HHHHHHHHHHHCCeEE-ecC---C-CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 4321 10 0 0245777888888444 332 2 4799999 88899999999999999988754
No 216
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.83 E-value=1.8e-19 Score=178.74 Aligned_cols=308 Identities=10% Similarity=0.082 Sum_probs=193.1
Q ss_pred cCcCCcchhcChhhHHHHHHHHHHHHHHhCCC-----CCCeE--ECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCce
Q psy12303 97 ANTNMFTYEIAPVFILMETVVLEKMRQIIGWQ-----GGDSI--LAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQL 169 (480)
Q Consensus 97 ~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~-----~~~~~--~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~ 169 (480)
.......|...++..++++++.+++ .|.. +.++. .|.+|++|+..+..+++... .+|+
T Consensus 68 ~~~~~~~y~~~~g~~~lr~~ia~~~---~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~-----------~~gd- 132 (409)
T 4eu1_A 68 TLGTNMDYAPVTGIASFVEEAQKLC---FGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFV-----------ANCN- 132 (409)
T ss_dssp CCCSCCCCCCTTCCHHHHHHHHHHH---HCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTS-----------SSCC-
T ss_pred CccccccCCCCCCcHHHHHHHHHHH---cCCCchhhccCceeeeecccchHHHHHHHHHHHHhc-----------CCCC-
Confidence 3334445555555566766665555 3554 45664 49999999887765443210 1445
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeC--CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS--DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IE 244 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~--~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~ 244 (480)
.|+++.++|.++...++..|. +++.+|. ++++.+|+++|++++++. ...++++++++++||||.+.+ ++
T Consensus 133 ~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~ 206 (409)
T 4eu1_A 133 RIYGPDVGYPNHESIFAKAGM---ELTPYSYYDPATKGLNLAGMLECLDKA---PEGSVILVHACAHNPTGVDPTHDDWR 206 (409)
T ss_dssp EEEEESSCCTHHHHHHHHTTC---EEEEECCEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCC---eEEEEEeecCcCCcCcHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHH
Confidence 888999999999999999998 7888987 346789999999999752 123678888999999999977 55
Q ss_pred HHHHHHHHcCcEEEeeccccccccccc---cccCcccCCCCCCccceeCccccCCCc-ccceEE--EEeCch----hhHh
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSK---KYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTI--HFKQDG----LLIS 314 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~---~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~--~~~~~~----~~~~ 314 (480)
+|.++|++||+++++|++|+.+..... ......+.+...-.+++.|++|.++.| .++|++ ++.++. +...
T Consensus 207 ~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~ 286 (409)
T 4eu1_A 207 QVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQ 286 (409)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHH
Confidence 599999999999999999988664321 000001111112235667899999854 568887 666665 3222
Q ss_pred hhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 315 CNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKG--------DEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g--------~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
.......... + ...+..+++...+. .+.++++.++..++++++.+.|++ .
T Consensus 287 ~~~~~~~~~~------------------~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 344 (409)
T 4eu1_A 287 LALLIRPMYN------------------N---PPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA-C 344 (409)
T ss_dssp HHHHHHHHHS------------------S---CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHhhhcC------------------C---CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 1110000000 0 11223333333221 344677888899999999999998 4
Q ss_pred C--C-eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCCcccEEEEecccCCCC
Q psy12303 387 D--K-FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLNDLPNFFRNIISSAAVT 462 (480)
Q Consensus 387 ~--g-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~~~~~~R~~~~~~~~t 462 (480)
. + +++. +|..+.+.|. .+. .+...++. +.| +++.+ + .|+++. . .+
T Consensus 345 g~~~~~~~~-~~~~~~~~~~----~~~---------------~~~~~~ll~~~g-v~v~p----~----~Ri~~~-~-~~ 393 (409)
T 4eu1_A 345 GSVHDWSHI-ERQVGMMAYT----GLT---------------REQVELLRSEYH-IYMTL----N----GRAAVS-G-LN 393 (409)
T ss_dssp TCCSCCHHH-HHSCSSEEEC----CCC---------------HHHHHHHHHHHC-EECCT----T----CEEEGG-G-CC
T ss_pred CCCCCccee-cCCceEEEEe----CCC---------------HHHHHHHHHcCC-EEEcC----C----CEEEEE-e-cC
Confidence 2 1 5543 4556666552 110 12334444 446 44443 1 388843 2 45
Q ss_pred HHHHHHHHHHHHHhhc
Q psy12303 463 EGDIDFLLTEMDRLGH 478 (480)
Q Consensus 463 ~~di~~~~~~l~~~~~ 478 (480)
+++|++++++|+++++
T Consensus 394 ~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 394 STNVEYVSQAIHNVTK 409 (409)
T ss_dssp TTTHHHHHHHHHHHHC
T ss_pred HhhHHHHHHHHHHHhC
Confidence 6779999999998753
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=2.5e-19 Score=178.82 Aligned_cols=312 Identities=12% Similarity=0.050 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....++++.++++++ +...++|++|||+|+..++++++.. . +++.+|+.....|.....++...|.+
T Consensus 93 ~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~a~~~-------~-----~~~~vi~~~~~yhg~~~~~~~~~g~~ 159 (429)
T 3k28_A 93 EIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRLARGY-------T-----GRNKILKFIGCYHGHGDSLLIKAGSG 159 (429)
T ss_dssp HHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHH-------H-----TCCEEEEEETCCCCSCGGGCSSCCTT
T ss_pred HHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHh-------h-----CCCEEEEECCCcCCCcHHHHHhcCCc
Confidence 344566777888886 4567999999999999999998763 1 11434555555665544443333321
Q ss_pred C----------------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 192 T----------------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 192 ~----------------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
. ..++.+|.+ |+++|++++++.. ..+++|+++..++++|.+.+ +++|.++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 231 (429)
T 3k28_A 160 VATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTE 231 (429)
T ss_dssp C-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHH
Confidence 1 023333332 8999999998532 13788999888888898888 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+++|+|++|.++ ........ ...++ ..|+++ +.|.++++.++|+++.+ +++.+........+..
T Consensus 232 ~~~~~li~DEv~~g~-~~g~~~~~-~~~~~-~~di~t--~sK~~~~G~~iG~~~~~-~~~~~~~~~~~~~~~~------- 298 (429)
T 3k28_A 232 QNGALLIFDEVMTGF-RVAYNCGQ-GYYGV-TPDLTC--LGKVIGGGLPVGAYGGK-AEIMRQVAPSGPIYQA------- 298 (429)
T ss_dssp HHTCEEEEECTTTTT-TSSTTHHH-HHHTC-CCSEEE--ECGGGGTTSCCEEEEEC-HHHHTTBTTTSSBCCC-------
T ss_pred HcCCEEEEecccccc-ccCcchHH-HHhCC-CCceeh--hhhhhcCCCCeEEEEEc-HHHHhhhccCCCcccc-------
Confidence 999999999999865 32211111 11233 467766 55999877889988764 4444332211100100
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
.+.....+.+.+++..+.... ++..++..++.+++.+.|++. .+.+..+ ++....+.+.+....
T Consensus 299 -----------~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 365 (429)
T 3k28_A 299 -----------GTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEP 365 (429)
T ss_dssp -----------CTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSC
T ss_pred -----------CCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCC
Confidence 011123444444443331101 456667777777777776650 2332222 233344445443221
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
..+. ......-.....++.+.|.++|++ +.+. + .+.+|++ ..+|++|+++++++|+++++++
T Consensus 366 ~~~~--~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~-~~~~r~~---~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 366 VINY--DAAKSSNLQFFAAYYREMVEQGVF-LPPS---Q-FEGLFLS---TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp CCSH--HHHTTSCHHHHHHHHHHHHHTTEE-CCSS---T-TSCBCCC---TTCCHHHHHHHHHHHHHHHHTC
T ss_pred cccc--cccccccHHHHHHHHHHHHHCCeE-EecC---C-CCCEEEE---CCCCHHHHHHHHHHHHHHHHHH
Confidence 1100 000000000124677888888844 3331 2 3567765 5789999999999999987653
No 218
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.82 E-value=3.1e-19 Score=176.06 Aligned_cols=223 Identities=12% Similarity=0.053 Sum_probs=156.8
Q ss_pred HHHHHHHHHHhCCCCCCeEE---CCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC-CCchhHHHH------
Q psy12303 115 TVVLEKMRQIIGWQGGDSIL---APGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD-QCHYSVRSC------ 184 (480)
Q Consensus 115 ~~~~~~la~~~g~~~~~~~~---t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~-~~h~s~~~~------ 184 (480)
.++.+.+++++|.+. .++ ++|||+||..++.+..+ ||| .|+++. ..|......
T Consensus 77 ~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~--------------pGD-~Vl~~~~~~y~~~~~~~g~~~~ 139 (427)
T 3hvy_A 77 DSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLR--------------PND-TMMSICGMPYDTLHDIIGMDDS 139 (427)
T ss_dssp HHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCC--------------TTC-EEEECSSSCCGGGHHHHTCCTT
T ss_pred HHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcC--------------CCC-EEEEeCCCCchhHHHHhccccc
Confidence 345566999999976 455 89999999988877643 666 677776 677665533
Q ss_pred -----HHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEecc----CCCccccccChHHHHHHHHH--c
Q psy12303 185 -----AAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTS----GTTVLGAFDPIEEIADICQK--Y 253 (480)
Q Consensus 185 -----~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~~l~~I~~i~~~--~ 253 (480)
+...|+ +++.++. +++.+|+++|++++++. .+|++|++++ ++|++|.+.|+++|.++|++ +
T Consensus 140 ~~~~~l~~~G~---~~~~v~~-~~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~ 211 (427)
T 3hvy_A 140 KKVGSLREYGV---KYKMVDL-KDGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNE 211 (427)
T ss_dssp CCSCCTGGGTC---EEEECCC-BTTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCS
T ss_pred hhhhHHHHcCC---EEEEecC-CCCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCC
Confidence 333455 7888888 67899999999999831 1289999999 99999999999999999999 8
Q ss_pred CcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcc--cceEEEEeCchhhHhhhcC-Cccccccccccc
Q psy12303 254 NMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLL--QCSTIHFKQDGLLISCNQM-SAEYLFMQDKLY 330 (480)
Q Consensus 254 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~--~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 330 (480)
|+++++|+||+.+......... ++|+++.|+||+++++. ..|+++ .++++.+..... ....+..
T Consensus 212 g~~livD~a~~~~~~~~~p~~~-------gaDiv~~S~sK~lgg~g~~~GG~i~-~~~~li~~l~~~~~~~~~g~----- 278 (427)
T 3hvy_A 212 NVIVFVDNCYGEFVEEKEPTDV-------GADIIAGSLIKNIGGGIATTGGYIA-GKEEYVTQATFRVTVPGIGG----- 278 (427)
T ss_dssp SSEEEEECTTCTTTSSSCGGGG-------TCSEEEEETTSGGGTTTCCSCEEEE-ECHHHHHHHHHHHSCTTTGG-----
T ss_pred CCEEEEECCccccccCCCCccc-------CCeEEEECCcccccccccceEEEEE-ECHHHHHHHHHHhhcCCccc-----
Confidence 9999999999887643222233 78999999999998642 235555 456555544321 1111100
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..+-.+. .+|+.++. ......+.++..+++.++.+.|++ .|+++.
T Consensus 279 -----------~~~~~~~--~a~~~~~g--l~~~~~r~~~~~~~a~~la~~L~~--~g~~V~ 323 (427)
T 3hvy_A 279 -----------ECGSTFG--VMRSLYEG--LFMAPHVTIEAVKGAVFCARIMEL--AGFDVL 323 (427)
T ss_dssp -----------GCCCCTT--CHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH--TTCEEE
T ss_pred -----------ccCCCHH--HHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHh--CCCeec
Confidence 0111011 13444433 445567888999999999999999 466774
No 219
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.82 E-value=5.4e-19 Score=183.27 Aligned_cols=315 Identities=16% Similarity=0.124 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCC
Q psy12303 114 ETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTD 193 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~ 193 (480)
-.++.+.+|+++|.+. ..++++|+|.||..++.+..+ ||+ .|+++..+|.|+..++...|.
T Consensus 197 i~eaE~~lA~~fGa~~-a~~v~nGts~An~~ai~al~~--------------pGD-~VLv~r~~H~S~~~~l~lsGa--- 257 (715)
T 3n75_A 197 HKEAEQYIARVFNADR-SYMVTNGTSTANKIVGMYSAP--------------AGS-TILIDRNCHKSLTHLMMMSDV--- 257 (715)
T ss_dssp HHHHHHHHHHHHTCSE-EEEESSHHHHHHHHHHHHHCC--------------TTC-EEEEESSCCHHHHHHHHHSCC---
T ss_pred HHHHHHHHHHHhCCCC-ceEECcHHHHHHHHHHHHhCC--------------CCC-EEEECCCccHHHHHHHHHcCC---
Confidence 3456677999999975 345566667999888887754 556 899999999999999999988
Q ss_pred CeEEeeCCCC-CC----C-----CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 194 NCVEVPSDKR-GR----L-----IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 194 ~v~~v~~~~~-~~----~-----d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
++++++.+.+ +. + |+++|++++++... ...|++|+++++ |++|.+.|+++|.++|+++ ++++|+||
T Consensus 258 ~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH 333 (715)
T 3n75_A 258 TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAW 333 (715)
T ss_dssp EEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTT
T ss_pred EEEEEeccccccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEcccc
Confidence 7778876532 32 4 89999999986421 112458999999 8999999999999999876 38999999
Q ss_pred ccccccccccc-CcccCCCCCCccc---eeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCc
Q psy12303 264 GGGLLLSKKYR-HPRLTGIERADSV---TWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDK 339 (480)
Q Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~D~~---~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 339 (480)
+.+..+.+... ...+..-..+|.+ +.|+||+++++.++|++++++........ ....++..+...
T Consensus 334 ~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~-~~~~~~~STSps---------- 402 (715)
T 3n75_A 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFN-EAYMMHTTTSPH---------- 402 (715)
T ss_dssp CTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHH-HHHHHTSCSSCC----------
T ss_pred ccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHH-HHHHhhcCCCch----------
Confidence 98765444332 1011111136776 89999999998889999987652111111 001111110000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCC------eEEecCCcee-EEEEEe--------
Q psy12303 340 VIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDK------FYLILEPEMV-NVSFWY-------- 404 (480)
Q Consensus 340 ~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g------~~~~~~~~~~-~v~f~~-------- 404 (480)
+ ....++-.+++.+..+.-.++.++..++++++++.|++ +++ ++++.+.... .-||..
T Consensus 403 -y-----~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~g 475 (715)
T 3n75_A 403 -Y-----GIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHG 475 (715)
T ss_dssp -H-----HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTC
T ss_pred -H-----HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-hhhhcccceeeccCcccccchhhhccCccccccc
Confidence 0 01112222333333222255778999999999999988 654 5666433211 111211
Q ss_pred -----------ecCcc----CCCchh-hH-HHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHH
Q psy12303 405 -----------LPTRV----RNMPHE-KR-LNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDID 467 (480)
Q Consensus 405 -----------~~~~~----~~~~~~-~~-~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~ 467 (480)
.|.++ .+.+.+ .+ ...+. ...+.+.|.+.| +.+..+. .+.+-+. .++..|+++++
T Consensus 476 f~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~--g~~~~~~L~~~~-I~~E~~d----~~~vl~l-~s~g~~~~~~~ 547 (715)
T 3n75_A 476 FKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIP--ASIVAKYLDEHG-IVVEKTG----PYNLLFL-FSIGIDKTKAL 547 (715)
T ss_dssp CTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCC--HHHHHHHHHHTT-CCCSEEE----TTEEEEE-CCTTCCHHHHH
T ss_pred ccccccCcccCCCeEEEEEcCCCCCCCccccCCCc--HHHHHHHHHHCC-CEEEecC----CCcEEEE-eCCCCCHHHHH
Confidence 11110 000000 00 00010 124556666665 4444332 3455555 77889999999
Q ss_pred HHHHHHHHhh
Q psy12303 468 FLLTEMDRLG 477 (480)
Q Consensus 468 ~~~~~l~~~~ 477 (480)
+++++|.++.
T Consensus 548 ~L~~aL~~~~ 557 (715)
T 3n75_A 548 SLLRALTDFK 557 (715)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 220
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.82 E-value=2.9e-18 Score=171.11 Aligned_cols=314 Identities=11% Similarity=0.078 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
....+++++++++++ ....++|++|||+|+..++++++.. .| ++.+|+.....|.....++...+.+
T Consensus 93 ~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~~a~~~-------~~-----~~~ii~~~~~yhg~~~~~~~~~~~~ 159 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIRLARGY-------TG-----RDKIIKFEGCYHGHADCLLVKAGSG 159 (429)
T ss_dssp HHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHH-------HC-----CCEEEEETTCCCC------------
T ss_pred HHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHHHHHHh-------hC-----CCEEEEEcCccCCCChhhhhhcCCc
Confidence 555677888999887 4567999999999999999988753 11 1335555556666655333222211
Q ss_pred C----------------CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHH
Q psy12303 192 T----------------DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQ 251 (480)
Q Consensus 192 ~----------------~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~ 251 (480)
. ..+..++.+ |+++|++++++. +..+++|+++..+++.|.+.| +++|.++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~ 231 (429)
T 4e77_A 160 ALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCD 231 (429)
T ss_dssp ------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 0 022333332 899999999752 223788888877777888877 999999999
Q ss_pred HcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccC
Q psy12303 252 KYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYD 331 (480)
Q Consensus 252 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (480)
+||+++|+|++|+++ ........ ...++ ..|+++ +.|.++++.+.|+++. +++..+........+..
T Consensus 232 ~~~~lli~DEv~~g~-r~g~~~~~-~~~~~-~pdi~t--~sK~~~~G~~~G~~~~-~~~~~~~l~~~~~~~~~------- 298 (429)
T 4e77_A 232 EFGALLIIDEVMTGF-RVALAGAQ-DYYHV-IPDLTC--LGKIIGGGMPVGAFGG-RREVMNALAPTGPVYQA------- 298 (429)
T ss_dssp HHTCEEEEEETTTBT-TTBTTCHH-HHTTC-CCSEEE--EEGGGGTTSCCEEEEE-CHHHHTTBTTTSSBCC--------
T ss_pred HcCCEEEEeccccCc-ccCcchHH-HhcCC-CCCeee--ecccccCCCCeEEEEE-CHHHHHHhccCCCcccc-------
Confidence 999999999999966 32222111 22233 457765 5699987788898775 44444332211100110
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeecCc
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLPTR 408 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~~~ 408 (480)
+ +.....+.+.+++..+..-.-+++.++..++.+++++.|++ . .++....+....++.+.+....
T Consensus 299 -----~------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 366 (429)
T 4e77_A 299 -----G------TLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRH-AAKEENIPLVVNHVGGMFGLFFTNAD 366 (429)
T ss_dssp ------------CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH-HHHHTTCCCEEEEETTEEEEECCSSS
T ss_pred -----C------CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HHHhCCCceEEEEeeeEEEEEEccCc
Confidence 0 11123334443333321100134455566666666666554 2 1222111223334444432210
Q ss_pred cCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 409 VRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 409 ~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
. ..+-......-.....++.+.|.++|++ +.+. + ...+|+ +..+|++|+++++++|+++++++
T Consensus 367 ~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~---~-~~~~~~---~~~~t~e~i~~~l~~l~~~l~~~ 429 (429)
T 4e77_A 367 T-VTCYQDVMNCDVERFKRFFHLMLEEGVY-LAPS---A-FEAGFM---SLAHSNEDIQKTVNAARRCFAKL 429 (429)
T ss_dssp C-CCSHHHHHTSCHHHHHHHHHHHHHTTEE-CCSS---T-TSCEEC---CTTCCHHHHHHHHHHHHHHHTTC
T ss_pred c-cccccccccccHHHHHHHHHHHHHCCeE-Eeec---C-CCCEEE---eccCCHHHHHHHHHHHHHHHHhC
Confidence 0 0000000000001124677888888844 3331 1 234454 46789999999999999988754
No 221
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.81 E-value=9.5e-19 Score=174.90 Aligned_cols=310 Identities=13% Similarity=0.108 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH---
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV--- 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~--- 187 (480)
.....+++++++++++ ....++|++|||+|+..+++++|.. . +++.+|+.....|.....+...
T Consensus 95 ~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ar~~-------~-----~~~~vi~~~~~yhg~~~~~~~~~~~ 161 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRLARGY-------T-----GRDLILKFDGCYHGSHDAVLVAAGS 161 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHHHHHH-------H-----CCCEEEEEETCCCCSSGGGSEECC-
T ss_pred CHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHh-------h-----CCCeEEEEcCCcCCCCHHHHHhcCC
Confidence 4556678888999885 3457999999999999999987642 1 1143555554455433222111
Q ss_pred ----------cCCC---CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 188 ----------CGLG---TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 188 ----------~g~~---~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
.|+. ...+..+|.+ |+++|++++++.. .++++|+++..++++|.+.| +++|.++|
T Consensus 162 ~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 233 (434)
T 2epj_A 162 AAAHYGVPTSAGVPEAVARLTLVTPYN-----DVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAALQRLS 233 (434)
T ss_dssp -----CEESSTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHH
T ss_pred CccccCCCCCCCCCCcccCceEecCCC-----CHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHH
Confidence 1221 0135666653 8999999997531 13788888888788999888 99999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++|+|++|+++ ........ ...++ .+|+++ ++|+++++.++|+++.++ +.++........+.
T Consensus 234 ~~~g~~lI~DEv~~g~-~~g~~~~~-~~~~~-~~di~s--~sK~l~~G~~~G~v~~~~-~~~~~l~~~~~~~~------- 300 (434)
T 2epj_A 234 RESGALLILDEVVTGF-RLGLEGAQ-GYFNI-EGDIIV--LGKIIGGGFPVGAVAGSR-EVMSLLTPQGKVFN------- 300 (434)
T ss_dssp HHHTCEEEEEETTTTT-TSSTTHHH-HHHTC-CCSEEE--EEGGGGTTSSCEEEEECH-HHHTTBTTTSSBCC-------
T ss_pred HHcCCEEEEEcchhce-eCCcchhh-HHhCC-CCCeee--ecchhcCCcceeeeeecH-HHHHhhccCCCccc-------
Confidence 9999999999999965 32221111 11233 467765 569998777889988754 44432211000000
Q ss_pred CcccCCCCccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEe
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWL---QWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWY 404 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~---~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~ 404 (480)
.+++ ..+.+.+.+ +++.+.. ++..++..++++++.+.|++ + .++....++...++.+.+
T Consensus 301 -----~~t~------~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~~~~i~~ 365 (434)
T 2epj_A 301 -----AGTF------NAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASE-VLDRTGLPYTINRVESMMQLFI 365 (434)
T ss_dssp -----CCTT------TTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHH-HHHHHTCCEEEEEETTEEEEEE
T ss_pred -----CCCC------CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHH-HHhhCCCcEEEEEeeeEEEEEE
Confidence 0000 122333333 3333211 34667777888888888876 4 133211123334444443
Q ss_pred ecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 405 LPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
............... .....++.+.|.++|+ ++.+. + ...+|+ +..+|++|+++++++|++++++
T Consensus 366 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv-~v~~~---~-~~~~~~---~~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 366 GVEEVSNAAQARKAD--KKFYVKLHEEMLRRGV-FIAPS---N-LEAVFT---GLPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp TCSCCSSHHHHTTSC--HHHHHHHHHHHHHTTE-ECCSS---T-TSCEEC---CTTCSHHHHHHHHHHHHHHHHH
T ss_pred eCCCcccchhccccC--HHHHHHHHHHHHHCCe-EEecc---C-CCcEEE---eccCCHHHHHHHHHHHHHHHHH
Confidence 221110000000000 0012467788888884 34332 1 223454 4678999999999999987654
No 222
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.80 E-value=3.6e-18 Score=168.91 Aligned_cols=308 Identities=13% Similarity=0.079 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCC
Q psy12303 112 LMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLG 191 (480)
Q Consensus 112 ~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~ 191 (480)
..+.++.+.++++++. ...+.|+++||+||+.|++.+|.. .|. +..|......|.........-+-.
T Consensus 127 ~~~~~lae~l~~~~p~-~~~v~f~~SGsEA~e~AiklAr~~-------tgr-----~~ii~~~~~yHG~t~~~~~~~~~~ 193 (454)
T 4ao9_A 127 LLEGRLARLICERFPQ-IEQLRFTNSGTEANLMALTAALHF-------TGR-----RKIVVFSGGYHGGVLGFGARPSPT 193 (454)
T ss_dssp SSHHHHHHHHHHHSTT-CSEEEEESSHHHHHHHHHHHHHHH-------HTC-----CEEEEETTCBCSTTCBBSSSBCTT
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEeCchHHHHHHHHHHHHhc-------ccC-----CeEEEEeCCcCCccccccccccCc
Confidence 3455677778888753 246999999999999999999875 222 324555566666432211111111
Q ss_pred --CCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEeeccccc
Q psy12303 192 --TDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 192 --~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
...+..+|.+ |++++++.+++. +..+++|++.......|.+.| +++|.++|++||++||+|+++.|
T Consensus 194 ~~~~~~~~~p~n-----d~~~l~~~l~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG 265 (454)
T 4ao9_A 194 TVPFDFLVLPYN-----DAQTARAQIERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS 265 (454)
T ss_dssp SCCSEEEEECTT-----CHHHHHHHHHHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred cCCCCcccCCCc-----hHHHHHHHHhhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC
Confidence 1123445554 899999999764 234899999999999999877 99999999999999999999984
Q ss_pred cccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCC
Q psy12303 266 GLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGR 345 (480)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r 345 (480)
.....+.. ...|+ .+|+++ +.|.++++++.|++..+. ++++........+... +++ .+.
T Consensus 266 --R~G~~~a~-e~~gv-~PDi~t--~gK~lggG~Piga~~~~~-ei~~~~~~~~~~~~h~-----------~T~---~gn 324 (454)
T 4ao9_A 266 --RLAPHGLA-NKLGI-RSDLTT--LGKYIGGGMSFGAFGGRA-DVMALFDPRTGPLAHS-----------GTF---NNN 324 (454)
T ss_dssp --GGSTTCHH-HHHTC-CCSEEE--EEGGGGTTSSCEEEEECH-HHHGGGCTTTCSCCCC-----------CTT---TTC
T ss_pred --CCccccch-hccCC-CCcEEE--eccccCCCCcceeeeeHH-HHHHHHhhccCCcccc-----------CCC---CCC
Confidence 32222222 33455 689988 569888888899988654 4444322111111100 111 111
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCC-eEEecCCceeEEEEEeecCccCCCchh-hHHHH
Q psy12303 346 HNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDK-FYLILEPEMVNVSFWYLPTRVRNMPHE-KRLNI 420 (480)
Q Consensus 346 ~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g-~~~~~~~~~~~v~f~~~~~~~~~~~~~-~~~~~ 420 (480)
+....+..++|+.+-.+ +..++..++.++|++.|++. .+- .++- -...++.+.+........... .....
T Consensus 325 Pla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr--g~G~m~gi~f~~~~~~~~~~~~~~d~~ 399 (454)
T 4ao9_A 325 VMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFT--GIGSLMNAHFVQGDVRSSEDLAAVDGR 399 (454)
T ss_dssp HHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEE--EETTEEEEESCCSCCCSGGGGTTCCHH
T ss_pred HHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEe--eeceEEEEEEecCCCCCHHHHHhhhHH
Confidence 12233344445554333 33455556666666665540 221 1221 123344555544332221111 11111
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
+...+...|.++|+ ++.+ .+.+. ++..+|++|||+++++|++++.+
T Consensus 400 ---~~~~~~~~ll~~Gv-~~~p------~~~~~---~s~~~T~~dId~~l~al~~~l~~ 445 (454)
T 4ao9_A 400 ---LRQLLFFHLLNEDI-YSSP------RGFVV---LSLPLTDADIDRYVAAIGSFIGG 445 (454)
T ss_dssp ---HHHHHHHHHHHTTE-ECCT------TCEEE---CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHCCE-EEcC------CCCEE---EeCCCCHHHHHHHHHHHHHHHHh
Confidence 22456778889984 3332 12333 34557999999999999998754
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.80 E-value=2.9e-18 Score=172.29 Aligned_cols=313 Identities=11% Similarity=0.062 Sum_probs=174.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH--
Q psy12303 110 FILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV-- 187 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~-- 187 (480)
..+++.+++++++++++ +.+.+++++|||+|+..++++++.. .+ + +.+|+.....|.....+...
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ar~~-------~~----~-~~vi~~~~~yhg~~~~~~~~~~ 161 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRVARAF-------TG----R-RMILRFEGHYHGWHDFSASGYN 161 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHHHHH-------HC----C-CEEEEECC--------------
T ss_pred CCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHHHHHh-------hC----C-CEEEEEcCCcCCCchhhHhhcC
Confidence 46788899999999986 5567999999999999999987642 11 1 32455544445333322221
Q ss_pred --------cCCCC---CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHH
Q psy12303 188 --------CGLGT---DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQK 252 (480)
Q Consensus 188 --------~g~~~---~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~ 252 (480)
.|+.. ..+..+|. .|+++|++++++.. .++++|+++..++++|.+.| +++|.++|++
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~ 233 (453)
T 2cy8_A 162 SHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQ 233 (453)
T ss_dssp --------------CGGGEEEECT-----TCHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHH
T ss_pred CccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 12210 12444544 38999999998531 13788888887788998877 9999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCc
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDV 332 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 332 (480)
||+++++|++|+++ ........ ...++ ..|+++ ++|+++++.++|+++.++ ++.+............
T Consensus 234 ~g~~lI~DEv~~g~-~~g~~~~~-~~~~~-~~di~s--~sK~l~~G~~~G~v~~~~-~~~~~l~~~~~~~~~~------- 300 (453)
T 2cy8_A 234 YGALFILDEVISGF-RVGNHGMQ-ALLDV-QPDLTC--LAKASAGGLPGGILGGRE-DVMGVLSRGSDRKVLH------- 300 (453)
T ss_dssp TTCEEEEECTTTTT-TTCTTHHH-HHHTC-CCSEEE--EEGGGGTTSSCEEEEECH-HHHTTSSSCC-------------
T ss_pred cCCEEEEecCcccc-ccCchhhh-HHhCC-CCcEEE--EChhhhCCcceEEEechH-HHHHHhccccCCCcee-------
Confidence 99999999999965 32211111 11233 467664 669998777899988754 4443221100000000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeec--
Q psy12303 333 RYDTGDKVIQCGRHNDIFKLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLP-- 406 (480)
Q Consensus 333 ~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~-- 406 (480)
.+ +-....+.+.+++..+.. - .++..++..++++++.+.|++ . .++....++...++.+.+.+
T Consensus 301 ---~~------t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~~~~i~~~~~~ 369 (453)
T 2cy8_A 301 ---QG------TFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNH-LFARKGLNWLAYGRFSGFHLMPGLPP 369 (453)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHH-HHHHTTCCEEEECCTTEEEEEETSCT
T ss_pred ---CC------CCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHH-HHhhCCCcEEEEEeeeEEEEEEeccc
Confidence 00 001233333333333221 1 244567777788888887765 3 13321123444455554421
Q ss_pred ---C-ccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 407 ---T-RVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 407 ---~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
. ...+......... ....++.+.|.++|+++ .+ . +.+|+ +..+++++|++++++|++++++
T Consensus 370 ~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~Gv~v-~~----~--~~~~l---~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 370 NTTDTGSITRAEVARPDV--KMIAAMRMALILEGVDI-GG----R--GSVFL---SAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp TCCCCHHHHTTCSCCCCH--HHHHHHHHHHHHTTEEC-BT----T--TEEEC---CTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccH--HHHHHHHHHHHHCCeEE-eC----C--CCEEe---eccCCHHHHHHHHHHHHHHHHH
Confidence 0 0000000000000 01245777888888443 22 2 23553 4778999999999999987653
No 224
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.79 E-value=2e-17 Score=166.58 Aligned_cols=314 Identities=16% Similarity=0.096 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCC-------------CccCC---ceEEEec
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGL-------------SAIKG---QLVMFTS 174 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~-------------~~~~g---~~~vl~~ 174 (480)
.++++++.+.++++++.+...++|++|||+||..|+++++.... .+.+|. ...|| +.+|...
T Consensus 109 ~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~--~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~ 186 (472)
T 1ohv_A 109 ENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYR--SKERGQSAFSKEELETCMINQAPGCPDYSILSFM 186 (472)
T ss_dssp TTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHH--HHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEET
T ss_pred HHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhh--hhccCcccccccccccccccccccCCCCeEEEEC
Confidence 56677777767777654455799999999999999999974210 000010 00123 4355556
Q ss_pred CCCchhHHHHHHHcCCC--------CCCeEEeeCCC-CC-------------CCCHHHHHHHHHHHHHCCCccEEEEecc
Q psy12303 175 DQCHYSVRSCAAVCGLG--------TDNCVEVPSDK-RG-------------RLIPSELERLVLERKAKGDIPFFVNCTS 232 (480)
Q Consensus 175 ~~~h~s~~~~~~~~g~~--------~~~v~~v~~~~-~~-------------~~d~~~L~~~i~~~~~~~~~~~~v~~~~ 232 (480)
...|.+...++...|.. ...+..++... .+ ..|+++|+++|++....+.++++|+++.
T Consensus 187 ~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~ 266 (472)
T 1ohv_A 187 GAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEP 266 (472)
T ss_dssp TCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcC
Confidence 66777766666655431 00111223211 01 1268899999987433222489999998
Q ss_pred CCCccccccC----hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCC-CCccceeCccccC-CCcccceEEEE
Q psy12303 233 GTTVLGAFDP----IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIE-RADSVTWNPHKLM-GTLLQCSTIHF 306 (480)
Q Consensus 233 ~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-~~D~~~~s~hK~~-~~p~~~g~~~~ 306 (480)
.++++|.+.| +++|.++|++||+++|+|++|+++......+.. ...++. .+|+++++ |++ ++ |+++
T Consensus 267 v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~-~~~gv~~~~Di~t~s--K~~l~G----G~~~- 338 (472)
T 1ohv_A 267 IQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAH-EHWGLDDPADVMTFS--KKMMTG----GFFH- 338 (472)
T ss_dssp SBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGG-GGGCCSSCCSEEEEC--GGGSSE----EEEE-
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhc-cccCCCCCCCEEEEc--cccccC----CccC-
Confidence 8899999877 999999999999999999999864332111111 122331 27887654 984 42 4443
Q ss_pred eCchhhHhhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 307 KQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
.+.+ . ....... .+++ ++......++.++++.+.. .++.++..+++++|.+.|++ +
T Consensus 339 -~~~~-~---~~~~~~~------------~~T~---~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~-l 394 (472)
T 1ohv_A 339 -KEEF-R---PNAPYRI------------FNTW---LGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLD-L 394 (472)
T ss_dssp -CGGG-S---CSSSSSS------------CCSS---SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHH-H
T ss_pred -chhh-c---ccccccc------------cCcc---CccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH-H
Confidence 3222 1 0011000 0110 1111122233334443322 34567777888888888765 3
Q ss_pred ----CC-eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCC
Q psy12303 387 ----DK-FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAV 461 (480)
Q Consensus 387 ----~g-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~ 461 (480)
|+ +..+ .+...++.+.+ +.. . ....+.+.|.++|+++. +. + .+++|++ ++..+
T Consensus 395 ~~~~~~~v~~~-~~~g~~~~~~~-~~~-------~-------~~~~~~~~l~~~Gv~~~-~~---g-~~~iRi~-~~~~~ 452 (472)
T 1ohv_A 395 QARYPQFISRV-RGRGTFCSFDT-PDE-------S-------IRNKLISIARNKGVMLG-GC---G-DKSIRFR-PTLVF 452 (472)
T ss_dssp HHHCTTTCEEE-EEETTEEEEEC-SSH-------H-------HHHHHHHHHHHTTEECE-EE---T-TTEEEEC-CCTTC
T ss_pred HhhCCCcEEee-cCCceEEEEEe-CCh-------h-------HHHHHHHHHHHCCeEEe-cC---C-CCEEEEE-CCCCC
Confidence 43 3322 23333444422 110 0 12457778888885443 31 2 4699999 88999
Q ss_pred CHHHHHHHHHHHHHhhccC
Q psy12303 462 TEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 462 t~~di~~~~~~l~~~~~~l 480 (480)
|++||++++++|+++++++
T Consensus 453 t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 453 RDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp CHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987653
No 225
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.79 E-value=4.6e-18 Score=167.35 Aligned_cols=290 Identities=10% Similarity=0.007 Sum_probs=182.4
Q ss_pred cchhcChhh-----HHHHHHHHHHHHHHhCC--CC-CCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCc---eE
Q psy12303 102 FTYEIAPVF-----ILMETVVLEKMRQIIGW--QG-GDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQ---LV 170 (480)
Q Consensus 102 ~~~~~~~~~-----~~~e~~~~~~la~~~g~--~~-~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~---~~ 170 (480)
..|....+. .++++.+.+++. ..|. .+ .++++|+|+++++..++.+..+ ||+ ..
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~Gd~~~~~ 121 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALSS--------------LARSQPVS 121 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHHH--------------TSSSSSEE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhcC--------------CCCCCcce
Confidence 345444454 677777777665 3454 23 5799999999999999988865 333 27
Q ss_pred EEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHH
Q psy12303 171 MFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADIC 250 (480)
Q Consensus 171 vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~ 250 (480)
|+++.++|+++...++..|. +++.++.|.++ +. . .++++|++++++||||.+.+ +|++
T Consensus 122 Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~~-l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~~-- 179 (391)
T 3bwn_A 122 VVAAAPFYSTYVEETTYVRS---GMYKWEGDAWG-FD--------K------KGPYIELVTSPNNPDGTIRE--TVVN-- 179 (391)
T ss_dssp EEECSSCCTHHHHHHHTTCB---TTEEEEEESTT-CC--------C------CSCEEEEEESSCTTTCCCCC--CCC---
T ss_pred EEEcCCCchhHHHHHHHcCC---eEEEecCCHHH-cC--------C------CCCEEEEECCCCCCCchhHH--HHHH--
Confidence 88999999999999999887 66778876542 11 0 23889999999999999975 5544
Q ss_pred HHcC--cEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccc
Q psy12303 251 QKYN--MWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQD 327 (480)
Q Consensus 251 ~~~~--~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 327 (480)
++++ +++++|++|..... . .+....+.++++.|++|.++.| ..+|++++.++.+......... +...
T Consensus 180 ~~~~~~~~ii~De~y~~~~~------~-~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~-~~~~-- 249 (391)
T 3bwn_A 180 RPDDDEAKVIHDFAYYWPHY------T-PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYII-VNSI-- 249 (391)
T ss_dssp ----CCCEEEEECTTCSTTT------S-CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHH-HHHS--
T ss_pred HhhcCCCEEEEeCCCCCCCC------C-ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhc-cccc--
Confidence 2255 99999999974210 0 1111225678899999999744 5679988756555443321110 0000
Q ss_pred cccCcccCCCCccccCCCCCCchHHHHHHHHh--c----------HHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecCC
Q psy12303 328 KLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--G----------DEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILEP 395 (480)
Q Consensus 328 ~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--g----------~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~~ 395 (480)
+ ...+...++...+ + .+.++++.++..++++++.+.|++ .+++++..+.
T Consensus 250 ---------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~ 310 (391)
T 3bwn_A 250 ---------------G---VSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKE-SDAFTLPKYP 310 (391)
T ss_dssp ---------------S---CCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHT-CSSEECCCCC
T ss_pred ---------------C---CCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccccCC
Confidence 0 1222222222222 1 235677888889999999999999 7888764321
Q ss_pred ------------ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCc-ccEEEEecccCCCC
Q psy12303 396 ------------EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDL-PNFFRNIISSAAVT 462 (480)
Q Consensus 396 ------------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~-~~~~R~~~~~~~~t 462 (480)
..+.+.+.-.+.. ..+...+.+.|+.+... ...+. .+++|+++. ++
T Consensus 311 ~~~~~f~~~~~~~~g~~~~~~~~~~-----------------~~~~~~l~~~gV~v~pg-~~fg~~~~~iRis~~---~~ 369 (391)
T 3bwn_A 311 EAFCNYFGKSLESYPAFAWLGTKEE-----------------TDLVSELRRHKVMSRAG-ERCGSDKKHVRVSML---SR 369 (391)
T ss_dssp CEEETTTTEEECCCCSEEEEEESSS-----------------CCHHHHHHHTTEECEEG-GGGTCCTTEEEEESC---SC
T ss_pred ccccccccccCCCcceEEEecCCcH-----------------HHHHHHHHHCCEEEccC-CCCCCCCCEEEEEec---CC
Confidence 1122333222211 12345566777544432 22222 579999944 38
Q ss_pred HHHHHHHHHHHHHhhc
Q psy12303 463 EGDIDFLLTEMDRLGH 478 (480)
Q Consensus 463 ~~di~~~~~~l~~~~~ 478 (480)
++++++++++|+++++
T Consensus 370 ~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 370 EDVFNVFLERLANMKL 385 (391)
T ss_dssp HHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 226
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.79 E-value=2.1e-17 Score=158.41 Aligned_cols=310 Identities=16% Similarity=0.138 Sum_probs=195.1
Q ss_pred hcChhhHHHHHHHHHHHHHHhCCCCCC---eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCC---c
Q psy12303 105 EIAPVFILMETVVLEKMRQIIGWQGGD---SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQC---H 178 (480)
Q Consensus 105 ~~~~~~~~~e~~~~~~la~~~g~~~~~---~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~---h 178 (480)
.......++|.-.++..+++||++... -+-.-||+.||+.+..++.+ ||| .|+..+.. |
T Consensus 93 gGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~--------------PGD-~ilg~~l~~GGH 157 (490)
T 3ou5_A 93 GGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQ--------------PHD-RIMGLDLPDGGH 157 (490)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC---------------CC-CEECBC------
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcC--------------CCC-EEEecccCCCCc
Confidence 344556789999999999999998752 25566889999999988865 667 66666655 4
Q ss_pred hhHH-----HHHHHcCCCCCCeEEeeCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHH
Q psy12303 179 YSVR-----SCAAVCGLGTDNCVEVPSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQK 252 (480)
Q Consensus 179 ~s~~-----~~~~~~g~~~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~ 252 (480)
.++. +.....|.-. +.+..++| +++.+|.+++++..++.+ |++|++ |.+..-...|++++.+||++
T Consensus 158 ltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~t~~IDyd~~~~~A~~~k-----PklIi~--G~SaY~r~id~~~~reIAd~ 229 (490)
T 3ou5_A 158 LTHGYMSDVKRISATSIFF-ESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIA--GTSAYARLIDYARMREVCDE 229 (490)
T ss_dssp -----------------------CBCEETTTTEECHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHH
T ss_pred ccccccCCCcccccccccc-cccccccCCCCCcccHHHHHHHHhhcC-----CCeEEE--CCccCccccCHHHHHHHHhh
Confidence 3333 2223333311 33444555 468999999999998863 889887 55556667899999999999
Q ss_pred cCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCch--------------hhHhhhcC
Q psy12303 253 YNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDG--------------LLISCNQM 318 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~--------------~~~~~~~~ 318 (480)
.|++|++|.||-.|.+....+..| + +.+|+++.+.||.+.+|. .|++++++.. +.......
T Consensus 230 vGA~Lm~DmAHiaGLVA~g~~psP-~---~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~a 304 (490)
T 3ou5_A 230 VKAHLLADMAHISGLVAAKVIPSP-F---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 304 (490)
T ss_dssp HTCEEEEECGGGHHHHHTTSSCCG-G---GTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHHHHH
T ss_pred cccEEEechhhhhhhhcccccCCc-c---ccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHHHhh
Confidence 999999999999988876665553 2 368999999999999876 5777777631 11111100
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEecC-Cc
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIF-KLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLILE-PE 396 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l-~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~~~-~~ 396 (480)
.+. +++++-....+ +...+++..-...+.++.++..++++.|.+.|.+ .|+.++.. ..
T Consensus 305 ----VFP--------------g~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~--~G~~vvsGgTd 364 (490)
T 3ou5_A 305 ----VFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE--RGYSLVSGGTD 364 (490)
T ss_dssp ----HTT--------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH--TTCEEGGGSCS
T ss_pred ----cCc--------------cccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh--CCCeeecCCCC
Confidence 000 11222222222 2223343322445688899999999999999999 79999863 33
Q ss_pred eeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCC-----cccEEEEec---ccCCCCHHHHHH
Q psy12303 397 MVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLND-----LPNFFRNII---SSAAVTEGDIDF 468 (480)
Q Consensus 397 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~-----~~~~~R~~~---~~~~~t~~di~~ 468 (480)
...+.+...+..+. .++..+.|-+.|+. +.....++ ....+|+.. ......++|+++
T Consensus 365 nHlvLvDl~~~g~t--------------G~~ae~~Le~agIt-vNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~ 429 (490)
T 3ou5_A 365 NHLVLVDLRPKGLD--------------GARAERVLELVSIT-ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRR 429 (490)
T ss_dssp SSEEEEECGGGTCC--------------HHHHHHHHHHTTEE-CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHH
T ss_pred ceEEEEeccccCCC--------------HHHHHHHHHHcCcE-ECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHH
Confidence 44455543333222 23444555566643 32211111 145799984 345678899999
Q ss_pred HHHHHHHhh
Q psy12303 469 LLTEMDRLG 477 (480)
Q Consensus 469 ~~~~l~~~~ 477 (480)
+.+.|.+++
T Consensus 430 IA~~I~~~l 438 (490)
T 3ou5_A 430 VVDFIDEGV 438 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887754
No 227
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.79 E-value=4.7e-16 Score=154.47 Aligned_cols=382 Identities=14% Similarity=0.078 Sum_probs=222.1
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCccCCCC-----------------CccccccC------CCChHHhHHHHHHHHcCcC
Q psy12303 44 LDIPEKGLPLQKLIDDCFTTLKYQVRTGHP-----------------MFMNQLSC------GLDVVSMAGEWLIATANTN 100 (480)
Q Consensus 44 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~p-----------------~~~~~~~~------~~~~~~~~~~~l~~~~~~~ 100 (480)
-.+| |....++++..++.++.+.....| +|+++..+ +...+.+.. .+...+..-
T Consensus 20 t~iP--GP~s~~l~~r~~~~~~~~~~~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~-Ai~~q~~~~ 96 (456)
T 4atq_A 20 GAFP--GPKSQALAERRSAVVAAGVASGVPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVA-AVQEAAAHF 96 (456)
T ss_dssp SSSS--CHHHHHHHHHHHHHBCTTCCCSCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHH-HHHHHHHHC
T ss_pred CCCC--ChHHHHHHHHHHHhCCCCCCCCCCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCCCHHHHH-HHHHHHhhc
Confidence 3445 334678888888888766533323 35554322 444555553 332222211
Q ss_pred CcchhcChhhHHHHHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCch
Q psy12303 101 MFTYEIAPVFILMETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHY 179 (480)
Q Consensus 101 ~~~~~~~~~~~~~e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~ 179 (480)
.+... .....+.+.++.+.+++++..+ ...++|+++||+||..|++.||.. .|. +..|......|.
T Consensus 97 ~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~-------t~r-----~~ii~~~~~yHG 163 (456)
T 4atq_A 97 THTCF-MVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLA-------TGR-----DAVVAFDHAYHG 163 (456)
T ss_dssp SCCTT-TTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH-------HCC-----CEEEEETTCCCC
T ss_pred cCccc-CccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhh-------hcC-----CeEEEEecccCC
Confidence 11100 0111244456778888888653 245889999999999999999875 221 324555566677
Q ss_pred hHHHHHHHcCCC----------CCCeEEeeCCCC------CCCCHHHHHHHHHHHH--HCCCccEEEEeccCCCcccccc
Q psy12303 180 SVRSCAAVCGLG----------TDNCVEVPSDKR------GRLIPSELERLVLERK--AKGDIPFFVNCTSGTTVLGAFD 241 (480)
Q Consensus 180 s~~~~~~~~g~~----------~~~v~~v~~~~~------~~~d~~~L~~~i~~~~--~~~~~~~~v~~~~~~~~~G~~~ 241 (480)
....+....+.. ...+..+|.... ..-+.+.+++.++... ..+..+++|++...+...|.+.
T Consensus 164 ~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~ 243 (456)
T 4atq_A 164 RTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIV 243 (456)
T ss_dssp SSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBC
T ss_pred ccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccc
Confidence 766666554421 124566665421 1224555555554322 1344589999999998888885
Q ss_pred C----hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhc
Q psy12303 242 P----IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQ 317 (480)
Q Consensus 242 ~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~ 317 (480)
| +++|.++|++||+++|+|+++.|+......+.+ ...|+ ..|+++++ |.+++.++.|.++.+++ .....
T Consensus 244 p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~-e~~gv-~PDivt~g--K~lggg~P~~av~~~~~-i~~~~-- 316 (456)
T 4atq_A 244 PAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAV-DHEGV-VPDIITMA--KGIAGGLPLSAITGRAD-LLDAV-- 316 (456)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG-GGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHH-HHTTS--
T ss_pred cchhhhHHHHHHHhhcCCceEecccccccCCccccccc-cccCC-CCchhhhh--hcccCcCCceeeEecHH-HHhcc--
Confidence 5 899999999999999999999997666555555 55667 68999964 88887888999987654 32221
Q ss_pred CCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCC--eEEe
Q psy12303 318 MSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM---PDK--FYLI 392 (480)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~---~~g--~~~~ 392 (480)
.+.... +++ .+.+....++.++|+.+-.++ +.++..++.++|.+.|++. .+. ..++
T Consensus 317 -~~~~~~------------~Tf---~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v 377 (456)
T 4atq_A 317 -HPGGLG------------GTY---GGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVV 377 (456)
T ss_dssp -CTTSSC------------CSS---SSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CE
T ss_pred -cccCCC------------CCC---CCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCce
Confidence 111100 001 111122333334444443333 4455666666666655540 221 1222
Q ss_pred cCC--ceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHH
Q psy12303 393 LEP--EMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLL 470 (480)
Q Consensus 393 ~~~--~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~ 470 (480)
.+. .+.++.+.+..+... ... .+...++.+.+.++|.++... ... .+.+|++ +....|+++||+++
T Consensus 378 ~~VRG~Gl~~giel~~~~~~-~~~-------~~~~~~v~~~~~~~Gvl~~~~-g~~--~~~irl~-PpL~it~~~id~~l 445 (456)
T 4atq_A 378 GDIRGRGAMLAIELVQPGSK-EPN-------AELTKAVAAACLKEGVIILTC-GTY--GNVIRLL-PPLVISDELLIDGL 445 (456)
T ss_dssp EEEEEETTEEEEEEBCTTSC-CBC-------HHHHHHHHHHHHHTTEECEEE-CTT--SCEEEEC-CCTTCCHHHHHHHH
T ss_pred EEeeecceEEEEEEecCCCC-CcC-------HHHHHHHHHHHHHCCCEEEec-CCC--CCEEEEE-CCCCCCHHHHHHHH
Confidence 221 122334444322211 011 112356788899999654432 211 4689999 98999999999999
Q ss_pred HHHHHhhcc
Q psy12303 471 TEMDRLGHD 479 (480)
Q Consensus 471 ~~l~~~~~~ 479 (480)
+.|++.++.
T Consensus 446 ~~l~~al~a 454 (456)
T 4atq_A 446 EVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988763
No 228
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.79 E-value=6.6e-18 Score=168.45 Aligned_cols=326 Identities=12% Similarity=0.060 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEE-ecCCCchhHHHHHHHcC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMF-TSDQCHYSVRSCAAVCG 189 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl-~~~~~h~s~~~~~~~~g 189 (480)
.+.+.++.+.|+++.+.+-..+.|++|||+||..|++++|.. ...+|. +++..|+ .....|.....++...|
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~----~~~~g~---~~r~~ii~~~~~yHG~t~~a~s~tg 182 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFL----HAAEGK---PQKRKILTRWNAYHGVTAVSASMTG 182 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHH----HHHTTC---TTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred CHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHH----HHhcCC---CCcceEEEeeceECCCccccccccc
Confidence 344556788899998766567999999999999999999864 123443 3333444 45556776666665544
Q ss_pred C--------CCCCeEEeeCCC------CCCCC-------HHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hH
Q psy12303 190 L--------GTDNCVEVPSDK------RGRLI-------PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IE 244 (480)
Q Consensus 190 ~--------~~~~v~~v~~~~------~~~~d-------~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~ 244 (480)
. ....+..++... .+..+ .+++++.+.+. ....+++|++...+...|.+.| ++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~EPiqg~gG~~~p~~~fl~ 260 (473)
T 4e3q_A 183 KPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE--GADTIAGFFAEPVMGAGGVIPPAKGYFQ 260 (473)
T ss_dssp CGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred cccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh--CCCceEEEEeCCccCCCCceeCCHHHHH
Confidence 2 112344444321 11111 23455555432 2234889999999998898855 89
Q ss_pred HHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCC---c
Q psy12303 245 EIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMS---A 320 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~---~ 320 (480)
+|.++|++||++||+|+++.|+......+.. ...++ ..|++++ .|.++++ .+.|+++++++ +.+...... .
T Consensus 261 ~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~-e~~gv-~PDi~t~--~K~l~gG~~Pl~av~~~~~-i~~~~~~~~~~~~ 335 (473)
T 4e3q_A 261 AILPILRKYDIPVISDEVICGFGRTGNTWGC-VTYDF-TPDAIIS--SKNLTAGFFPMGAVILGPE-LSKRLETAIEAIE 335 (473)
T ss_dssp HHHHHHHHTTCCEEEECTTTSSSTTSSSCHH-HHTTC-CCSEEEE--CGGGGTTSSCCEEEEECHH-HHHHHHHHHHHHS
T ss_pred HHHHHhcccceEEeccCccccCCcccchhHH-HhcCC-CCChHHh--cccccCCCCCcccccccHH-HHHHhcccccccc
Confidence 9999999999999999999998765555444 45566 6899984 5988777 78999987654 333221100 0
Q ss_pred ccccccccccCcccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeEEecCCcee
Q psy12303 321 EYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSM--PDKFYLILEPEMV 398 (480)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~--~~g~~~~~~~~~~ 398 (480)
.+. +. .+.....+++.+++..+..-.-+.+.++..++.++|.+.|++. .|.+.-+ .-.+.
T Consensus 336 ~~~-hg----------------~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-RG~Gl 397 (473)
T 4e3q_A 336 EFP-HG----------------FTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEY-RGIGF 397 (473)
T ss_dssp CCC-CC----------------CTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETT
T ss_pred ccc-cC----------------CCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEE-eecce
Confidence 111 00 1111234444444433221111334566667777777777651 2443211 11122
Q ss_pred EEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 399 NVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 399 ~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
++.+.+.......... +.. ..+...+.+.+.++|.++... .+.+|++ +....|++|||++++.+++.++
T Consensus 398 ~~gielv~~~~~~~~~-~~~---~~~~~~~~~~~~~~Gll~~~~------g~~i~l~-PPL~it~~eid~~~~~l~~al~ 466 (473)
T 4e3q_A 398 MWALEAVKDKASKTPF-DGN---LSVSERIANTCTDLGLICRPL------GQSVVLC-PPFILTEAQMDEMFDKLEKALD 466 (473)
T ss_dssp EEEEEECSBTTTTBCC-CGG---GCHHHHHHHHHHHTTEECEEE------TTEEEEC-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCccccccc-ccc---HHHHHHHHHHHHHCCcEEEec------CCEEEEe-CCCCCCHHHHHHHHHHHHHHHH
Confidence 3334333221110000 000 112356788899999654332 3689998 8899999999999999988765
Q ss_pred c
Q psy12303 479 D 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 467 ~ 467 (473)
T 4e3q_A 467 K 467 (473)
T ss_dssp H
T ss_pred H
Confidence 4
No 229
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.79 E-value=1.1e-18 Score=173.13 Aligned_cols=224 Identities=11% Similarity=0.049 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHhCCCCCCe-EECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC-CCchhHHHHHHH----
Q psy12303 114 ETVVLEKMRQIIGWQGGDS-ILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD-QCHYSVRSCAAV---- 187 (480)
Q Consensus 114 e~~~~~~la~~~g~~~~~~-~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~-~~h~s~~~~~~~---- 187 (480)
.+++.+++++++|.+.... ++++|||+||..++.++.. ||+ .|+++. ..|.++...+..
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~--------------~Gd-~Vl~~~~~~y~~~~~~~~l~g~~ 131 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILR--------------PGD-ELLYITGKPYDTLEEIVGVRGKG 131 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCC--------------TTC-EEEECSSSCCTTHHHHTTSSSCS
T ss_pred HHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCC--------------CCC-EEEEeCCCCchhHHHHHhhcccc
Confidence 5667888999999975322 1245889999988876543 556 677776 889888876643
Q ss_pred ------cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEecc----CCCccccccChHHHHHHHHH--cCc
Q psy12303 188 ------CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTS----GTTVLGAFDPIEEIADICQK--YNM 255 (480)
Q Consensus 188 ------~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~~l~~I~~i~~~--~~~ 255 (480)
.|. +++.++.++++.+|+++|+++++++ |++|++++ +++++|...++++|.++|++ +|+
T Consensus 132 ~~~~~~~G~---~~~~v~~~~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~ 202 (431)
T 3ht4_A 132 VGSFKEYNI---GYNAVPLTEGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDV 202 (431)
T ss_dssp SSCSGGGTC---EEEECCBCTTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTC
T ss_pred cchHHHcCC---EEEEeCCCCCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCC
Confidence 455 7899999888999999999999764 89999997 77777778899999999999 999
Q ss_pred EEEeeccccccccccccccCcccCCCCCCccceeCccccCCC---cccceEEEEeCchhhHhhhcC-CcccccccccccC
Q psy12303 256 WLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGT---LLQCSTIHFKQDGLLISCNQM-SAEYLFMQDKLYD 331 (480)
Q Consensus 256 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~---p~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 331 (480)
++++|++|+.+......... ++|+++.|++|++++ |.| |+++. ++++.+..... ....+..
T Consensus 203 ~livDea~~~~~~~~~~~~~-------g~Di~~~S~sK~lgg~~~~~G-G~v~~-~~~li~~l~~~~~~~~~g~------ 267 (431)
T 3ht4_A 203 VVFVDNCYGEFIEEQEPCHV-------GADLMAGSLIKNPGGGIVKTG-GYIVG-KEQYVEACAYRLTSPGIGA------ 267 (431)
T ss_dssp EEEEECTTCTTSSSCCGGGT-------TCSEEEEETTSGGGTTTCSSC-EEEEE-CHHHHHHHHHHHSCTTTTT------
T ss_pred EEEEeCCChhhccCCCcccc-------CCeEEEcCccccCCCCCCCce-EEEEe-cHHHHHHHHHHhccCCccc------
Confidence 99999999988753333333 689999999999765 344 66665 45554443210 1110100
Q ss_pred cccCCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEe
Q psy12303 332 VRYDTGDKVIQCGRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~~ 392 (480)
..+..+.. .++.++ +......++++..++++++.+.|++ .|+++.
T Consensus 268 ----------~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~--~g~~v~ 312 (431)
T 3ht4_A 268 ----------EAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEK--LGMNTS 312 (431)
T ss_dssp ----------SCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH--HTCCEE
T ss_pred ----------ccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHh--CcCEec
Confidence 01111111 122222 2344577788899999999999998 466664
No 230
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.78 E-value=1.2e-17 Score=166.47 Aligned_cols=309 Identities=13% Similarity=0.113 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCC
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGL 190 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~ 190 (480)
..+..++.++++++++ +.+.+++++|||+|+..+++++|... +++.+|+.....|.....+....|.
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~ar~~~------------~~~~vi~~~~~yhg~~~~~~~~~~~ 157 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRLARGYT------------GRPYIVKFRGNYHGHADGLLVEAGS 157 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHHHHHHH------------CCCEEEEETTCCCCCCGGGSEECCS
T ss_pred CHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh------------CCCEEEEECCCcCCCcHHHHHhcCC
Confidence 4566778888999886 45679999999999999999876421 1143555555555433322221111
Q ss_pred -----------CC-----CCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHH
Q psy12303 191 -----------GT-----DNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADIC 250 (480)
Q Consensus 191 -----------~~-----~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~ 250 (480)
+. ..++.+|.+ |+++|++++++.. ..+++|+++..++++|.+.| +++|.++
T Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l- 228 (424)
T 2e7u_A 158 GALTLGVPSSAGVPEEYAKLTLVLEYN-----DPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA- 228 (424)
T ss_dssp SSCCBCEESSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-
T ss_pred cccccCCCCCCCCCCccCCceEeCCCC-----CHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-
Confidence 10 135555543 8999999997531 12778887776666898877 9999999
Q ss_pred HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCccccccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLY 330 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 330 (480)
++||+++++|++|+++ ........ ...++ ..|++ +++|+++++.++|+++.++ ++.+........+.
T Consensus 229 ~~~g~~lI~DEv~~g~-~~g~~~~~-~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~-~~~~~~~~~~~~~~------- 295 (424)
T 2e7u_A 229 KAYGVLLIADEVMTGF-RLAFGGAT-ELLGL-KPDLV--TLGKILGGGLPAAAYAGRR-EIMEKVAPLGPVYQ------- 295 (424)
T ss_dssp GGGTCEEEEECTTTTT-TSSTTHHH-HHHTC-CCSEE--EECGGGGTTSSCEEEEECH-HHHTTBTTTSSBCC-------
T ss_pred HHcCCEEEEecCcccc-ccchhHHH-HHhCC-Ccchh--hhhhhhhCCcceEEEEEcH-HHHhhhcccCCccc-------
Confidence 9999999999999965 32221111 12233 46766 4679999777889988754 44433221000000
Q ss_pred CcccCCCCccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCC---CCeEEecCCceeEEEEEeec
Q psy12303 331 DVRYDTGDKVIQCGRHNDIFKLWLQWRAKGD-EGFEKQIDRLMELAEYMVKKIKSMP---DKFYLILEPEMVNVSFWYLP 406 (480)
Q Consensus 331 ~~~~~~~~~~~~~~r~~~~l~~~~~l~~~g~-~~~~~~~~~~~~l~~~l~~~l~~~~---~g~~~~~~~~~~~v~f~~~~ 406 (480)
.+++ ..+.+.+.+++..+.. +..+++.++..++.+++.+.|++ . .++....++...++.+.+..
T Consensus 296 -----~~t~------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~~~~i~~~~ 363 (424)
T 2e7u_A 296 -----AGTL------SGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKE-VLKEKGLPHTVNRVGSMITVFFTE 363 (424)
T ss_dssp -----CCTT------CSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH-HHHHTTCCCEEEEETTEEEEESSS
T ss_pred -----CCCC------CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HHHhCCCceEEEeeceEEEEEEeC
Confidence 0000 1223333333333211 11245677778888888888876 4 13321112333444443321
Q ss_pred CccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHh
Q psy12303 407 TRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRL 476 (480)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~ 476 (480)
............. .....++.+.|.++|+ ++.+.. ...+|+ +..+|++++++++++|+++
T Consensus 364 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv-~v~~~~----~~~~~~---~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 364 GPVVTFQDARRTD--TELFKRFFHGLLDRGI-YWPPSN----FEAAFL---SVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SCCCSHHHHTTSC--HHHHHHHHHHHHTTTE-ECCSSS----SSCEEC---CTTCCHHHHHHHHHHHHHH
T ss_pred CCCcchhhhcccC--HHHHHHHHHHHHHCCe-EEeccC----CCceEe---eccCCHHHHHHHHHHHHHh
Confidence 1110000000000 0012467788888884 443321 123453 4678999999999999875
No 231
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.78 E-value=2e-17 Score=162.86 Aligned_cols=306 Identities=11% Similarity=-0.012 Sum_probs=197.7
Q ss_pred CCcchhcChhhHHHHHHHHHHHHHHhCC--CCCC--eEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecC
Q psy12303 100 NMFTYEIAPVFILMETVVLEKMRQIIGW--QGGD--SILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSD 175 (480)
Q Consensus 100 ~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~ 175 (480)
....|....+..++.+.+.+|+.+..+. ++++ +++|+|+++|+..++.+..+. .| + .|+++.
T Consensus 64 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~------------~~-d-~Vlv~~ 129 (405)
T 3k7y_A 64 KEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKML------------NV-E-TLYVTN 129 (405)
T ss_dssp CCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTT------------TC-C-EEEEES
T ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhc------------CC-C-EEEEeC
Confidence 3456766777888888888888554443 2343 589999999999998877642 04 4 889999
Q ss_pred CCchhHHHHHHHcCCCCCCeEEeeC-CC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccC-CCccccccC---hHHHHHH
Q psy12303 176 QCHYSVRSCAAVCGLGTDNCVEVPS-DK-RGRLIPSELERLVLERKAKGDIPFFVNCTSG-TTVLGAFDP---IEEIADI 249 (480)
Q Consensus 176 ~~h~s~~~~~~~~g~~~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~~---l~~I~~i 249 (480)
++++.+...++..|. +++.+|+ ++ ++.+|+++|++++++. .++++|+++.+ +||||.+.+ +++|+++
T Consensus 130 P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~ 202 (405)
T 3k7y_A 130 PPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEI 202 (405)
T ss_dssp SCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999998 8888987 33 5889999999999752 12567777654 899999966 6778899
Q ss_pred HHHcCcEEEeecccccccccc-ccc--cCcccCCCCCCccceeCccccCC-CcccceEEEE--eCchhhHhhhcC-----
Q psy12303 250 CQKYNMWLHVDAAWGGGLLLS-KKY--RHPRLTGIERADSVTWNPHKLMG-TLLQCSTIHF--KQDGLLISCNQM----- 318 (480)
Q Consensus 250 ~~~~~~~l~vD~a~~~~~~~~-~~~--~~~~~~~~~~~D~~~~s~hK~~~-~p~~~g~~~~--~~~~~~~~~~~~----- 318 (480)
|++|++++++|++|....... +.. ....+.....--+++.|++|.++ .+..+|++++ .+++........
T Consensus 203 ~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~ 282 (405)
T 3k7y_A 203 VLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIV 282 (405)
T ss_dssp HHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999999999999998765321 100 00011111112355679999998 5578999864 444433221100
Q ss_pred CcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh-----c---HHHHHHHHHHHHHHHHHHHHHHh----cCC
Q psy12303 319 SAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK-----G---DEGFEKQIDRLMELAEYMVKKIK----SMP 386 (480)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~-----g---~~~~~~~~~~~~~l~~~l~~~l~----~~~ 386 (480)
...+.. ...+...++...+ + .+.+.++.++..+.++++.+.|+ + .
T Consensus 283 ~~~~~~----------------------~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~-~ 339 (405)
T 3k7y_A 283 RKFYSS----------------------PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKK-Y 339 (405)
T ss_dssp HTTTSS----------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-G
T ss_pred hcccCC----------------------CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-c
Confidence 001100 1122222222111 1 23345666778888999999998 7 4
Q ss_pred C---CeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCH
Q psy12303 387 D---KFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTE 463 (480)
Q Consensus 387 ~---g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~ 463 (480)
. ++++ .+|+.++++|.-.+. +..++|.+.| +++.+ + + |+++.. .++
T Consensus 340 g~~~~~~~-~~p~gg~f~~~~l~~-------------------~~~~~L~~~g-V~v~p----~--~--Ris~a~--~~~ 388 (405)
T 3k7y_A 340 NLNYDWNV-YKKQRGLFSFVPLLA-------------------KIAEHLKTHH-IYIIN----N--G--RINVSG--ITK 388 (405)
T ss_dssp TCCCCGGG-GSSCCSSEEECGGGG-------------------GGTTTTTTTT-EECCT----T--S--EEEGGG--CCT
T ss_pred CCCCCCcc-ccCCceEEEecCCCH-------------------HHHHHHHHCC-EeecC----C--C--eEEEec--cCH
Confidence 2 1454 367788777632211 1123454555 44443 2 2 998543 468
Q ss_pred HHHHHHHHHHHHhhccC
Q psy12303 464 GDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 464 ~di~~~~~~l~~~~~~l 480 (480)
++|++++++|+++++.+
T Consensus 389 ~~i~~~~~~i~~~~~~~ 405 (405)
T 3k7y_A 389 NNVDYIADKICLSLSQI 405 (405)
T ss_dssp THHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999987653
No 232
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.77 E-value=3.2e-18 Score=175.06 Aligned_cols=349 Identities=10% Similarity=0.055 Sum_probs=195.2
Q ss_pred chhcChhhHHHHHH-HHHHHHHHhCC-----CCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCC
Q psy12303 103 TYEIAPVFILMETV-VLEKMRQIIGW-----QGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQ 176 (480)
Q Consensus 103 ~~~~~~~~~~~e~~-~~~~la~~~g~-----~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~ 176 (480)
.|....+...+.++ +..++.+..+. +++++++|+|+++++..++.++..+.+ ..||+ .|+++.+
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l---------~~~Gd-~Vlv~~P 202 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGL---------LKAGD-KVAIGMP 202 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTS---------SCTTC-EEEEEES
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhc---------CCCCC-EEEEeCC
Confidence 45444444455544 44555665432 246899999999999998877532110 01556 7888889
Q ss_pred CchhHHHHHHHcCCCCCCeEEeeCCC--CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHH-
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVPSDK--RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADIC- 250 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~- 250 (480)
+|+.+..++...+.+. +++.+|.++ ++.+|+++|++++++. +++|++++++||||.+.+ +++|.++|
T Consensus 203 ~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~ 275 (546)
T 2zy4_A 203 VFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERVRNIVA 275 (546)
T ss_dssp CCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGSTT------EEEEEEESSCSSSCBCCCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHHH
Confidence 9999988877665443 778888865 3579999998876433 899999999999999976 56678888
Q ss_pred -HHcCcEEEeeccccccccccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCc--------
Q psy12303 251 -QKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSA-------- 320 (480)
Q Consensus 251 -~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~-------- 320 (480)
+++|+++++|++|+.+...... ......+.++++.|++|+++.| ..+|+++..+..+........+
T Consensus 276 ~~~~~~~ii~De~y~~~~~~~~s----~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~ 351 (546)
T 2zy4_A 276 EHRPDLMILTDDVYGTFADDFQS----LFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351 (546)
T ss_dssp HTCTTCEEEEECTTGGGSTTCCC----HHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred hccCCcEEEEeCcchhhcccCcC----HHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHH
Confidence 7899999999999976531111 1111113567788999999744 6789999876534333211110
Q ss_pred -ccccccccccCcc----c--CCCCccccCCCCCCchHHHH----HH-HHh--cHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12303 321 -EYLFMQDKLYDVR----Y--DTGDKVIQCGRHNDIFKLWL----QW-RAK--GDEGFEKQIDRLMELAEYMVKKIKSMP 386 (480)
Q Consensus 321 -~~l~~~~~~~~~~----~--~~~~~~~~~~r~~~~l~~~~----~l-~~~--g~~~~~~~~~~~~~l~~~l~~~l~~~~ 386 (480)
.|........... + +........+.........+ ++ ..+ +....++..+...+..+.+.+.|..
T Consensus 352 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~~-- 429 (546)
T 2zy4_A 352 HRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGM-- 429 (546)
T ss_dssp HHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGTS--
T ss_pred HHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 0000000000000 0 00000000000011111111 11 111 2344556666666677777776643
Q ss_pred CCeEEecCCceeEEEEEeecCccCCCchhhHHHHhh---hhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCH
Q psy12303 387 DKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILG---EITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTE 463 (480)
Q Consensus 387 ~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~---~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~ 463 (480)
++.. .++..+.+++...+.-........+...+. .-...+.+.+.+.|+.+.+...+....+++|+++. ..++
T Consensus 430 -~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~--~~~~ 505 (546)
T 2zy4_A 430 -PPLR-DENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA--NLNE 505 (546)
T ss_dssp -SCCC-CTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS--SSCH
T ss_pred -Cccc-CCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec--cCCH
Confidence 2332 345666554432211000000000000010 00123566777888665543333222568999953 3479
Q ss_pred HHHHHHHHHHHHhhc
Q psy12303 464 GDIDFLLTEMDRLGH 478 (480)
Q Consensus 464 ~di~~~~~~l~~~~~ 478 (480)
+++++++++|+++++
T Consensus 506 e~i~~~~~~l~~~l~ 520 (546)
T 2zy4_A 506 YEYAAIGRALRKMAD 520 (546)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 233
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.77 E-value=2.3e-18 Score=171.32 Aligned_cols=291 Identities=8% Similarity=-0.053 Sum_probs=183.8
Q ss_pred hHHHHHHHHHHHHHHhC--CCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHH
Q psy12303 110 FILMETVVLEKMRQIIG--WQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAV 187 (480)
Q Consensus 110 ~~~~e~~~~~~la~~~g--~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~ 187 (480)
..++++.+++++.+..+ +++.++++|+|+++++..++.+..... .+....||+ .|+++.+.|+.+...++.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~------~~~~~~~Gd-~Vlv~~P~y~~~~~~~~~ 174 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNM------TATPDAPES-KVVAHAPFYPVFREQTKY 174 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCT------TTCTTSCCE-EEEECSSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhcc------ccccCCCCC-EEEEeCCCcccHHHHHHH
Confidence 57778887777776544 466789999999999999988771000 000001555 899999999999999999
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.|. +++. +.+|+++|++++++. +++|++++++||||.+.+ +. ++ +++.+.|+++....
T Consensus 175 ~g~---~~~~------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~-~~----l~--~~~~i~d~~~~~~~ 232 (427)
T 2hox_A 175 FDK---KGYV------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-AV----IK--GCKSIYDMVYYWPH 232 (427)
T ss_dssp SCB---TTEE------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-CS----ST--TCEEEEECTTCSTT
T ss_pred cCC---eeee------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH-HH----Hc--CCCEEEeecccCCC
Confidence 987 4433 345778888877654 889999999999999988 42 33 56788888764211
Q ss_pred cccccccCcccCCCCCCccceeCccccCCCc-ccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccCCCC
Q psy12303 268 LLSKKYRHPRLTGIERADSVTWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRH 346 (480)
Q Consensus 268 ~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~ 346 (480)
. +.. .+. .+.++++.|++|.++.| ..+|+++++++.+............. .
T Consensus 233 ~--s~~---~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~---------------------~ 284 (427)
T 2hox_A 233 Y--TPI---KYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTE---------------------G 284 (427)
T ss_dssp T--SCC---CSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTS---------------------S
T ss_pred C--Ccc---ccC--CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCC---------------------C
Confidence 0 000 011 36789999999999744 56899998666655443321110000 0
Q ss_pred CCchHHHHHHHHh--cH-----------HHHHHHHHHHHHHHHHHHHHHhcCCCCeEE--ec-----------CCceeEE
Q psy12303 347 NDIFKLWLQWRAK--GD-----------EGFEKQIDRLMELAEYMVKKIKSMPDKFYL--IL-----------EPEMVNV 400 (480)
Q Consensus 347 ~~~l~~~~~l~~~--g~-----------~~~~~~~~~~~~l~~~l~~~l~~~~~g~~~--~~-----------~~~~~~v 400 (480)
...+...++...+ +. +.+++..++..++.+++.+.|++ .+|+.+ +. .|..+++
T Consensus 285 ~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~p~~g~f 363 (427)
T 2hox_A 285 TPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ-SDRFSYQELPQSEYCNYFRRMRPPSPSY 363 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT-SSSEECCCCCSCEEETTTTEEECCCCSE
T ss_pred CCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh-CcCccccccccccccccccccCCCCceE
Confidence 1222222222222 11 23445667788889999999999 788876 21 2334555
Q ss_pred EEEeecCccCCCchhhHHHHhhhhhHHHHHHHH-hcccEEEeeeeeCC-cccEEEEecccCCCCHHHHHHHHHHHHHhhc
Q psy12303 401 SFWYLPTRVRNMPHEKRLNILGEITPILKGRMM-QAGTMMVGYQPLND-LPNFFRNIISSAAVTEGDIDFLLTEMDRLGH 478 (480)
Q Consensus 401 ~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~g~~~~~~~~~~~-~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~ 478 (480)
+|.-.+.. ..++.+++. +.|+. +.++...+ ..+++|+++. ++++++++++++|+++++
T Consensus 364 ~~~~~~~~----------------~~~~~~~ll~~~gI~-v~pg~~f~~~~~~~Ris~~---~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 364 AWVKCEWE----------------EDKDCYQTFQNGRIN-TQNGVGFEASSRYVRLSLI---KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp EEEEECSG----------------GGCSHHHHHHHTTEE-CEEGGGGTSCTTEEEEECS---SCHHHHHHHHHHHHHHHT
T ss_pred EEEECCCc----------------HHHHHHHHHHHCCEE-EcCCCccCCCCCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence 55333321 012344544 56644 44322222 1579999954 389999999999998765
No 234
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.67 E-value=4.1e-15 Score=146.44 Aligned_cols=338 Identities=10% Similarity=0.032 Sum_probs=198.7
Q ss_pred CccccccCCCChHHhHHHHHHHHcCcC-CcchhcChhhHHHHHHHHHHHHHHhCC--CC--CCeEECCChhHHHHHHHHH
Q psy12303 74 MFMNQLSCGLDVVSMAGEWLIATANTN-MFTYEIAPVFILMETVVLEKMRQIIGW--QG--GDSILAPGGSISNLYAFLA 148 (480)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~--~~--~~~~~t~ggt~a~~~al~~ 148 (480)
-|.+--.-++.++++. ++.....+.+ ...|....+..++.+.+.+++ +|- +. ...+-|.|||.|+..++..
T Consensus 53 ~y~d~~g~~~vl~~Vk-~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~ 128 (420)
T 4h51_A 53 AYRDEQGRPYPLRVVR-KAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVELENLVAVQTLSGTGAVSLGAKL 128 (420)
T ss_dssp CCBCTTSCBCCCHHHH-HHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CGGGEEEEEEEHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCHHHH-HHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccccccceeeecCchHHHHHHHHH
Confidence 3444333344445443 3333333333 234766677777777765554 343 22 2345689999999888876
Q ss_pred HHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCC--CCCCCCHHHHHHHHHHHHHCCCccE
Q psy12303 149 ARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSD--KRGRLIPSELERLVLERKAKGDIPF 226 (480)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~ 226 (480)
+.... ..||+ .|++++++++++...++..|.. .|...+.. +++.+|.+.+.+.++.. ..+++
T Consensus 129 l~~~~----------~~pgd-~V~ip~P~w~~y~~i~~~aG~~--~V~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~ 192 (420)
T 4h51_A 129 LTRVF----------DAETT-PIYLSDPTWPNHYGVVKAAGWK--NICTYAYYDPKTVSLNFEGMKKDILAA---PDGSV 192 (420)
T ss_dssp HTTTS----------CTTTS-CEEEEESCCTHHHHHHHHTTCC--CEEEEECEEGGGTEECHHHHHHHHHHS---CSSCE
T ss_pred HHHhc----------CCCCC-EEEEecCCchhHHHHHHHcCCe--EEEeeccccccccCCCHHHHHHHHhcc---CCCcE
Confidence 65421 11556 7899999999999999999873 24444432 35678988888887653 33478
Q ss_pred EEEeccCCCccccccC---hHHHHHHHHHcCcEEEeecccccccccccc-ccCc--ccCCCCCCccceeCccccCCCc-c
Q psy12303 227 FVNCTSGTTVLGAFDP---IEEIADICQKYNMWLHVDAAWGGGLLLSKK-YRHP--RLTGIERADSVTWNPHKLMGTL-L 299 (480)
Q Consensus 227 ~v~~~~~~~~~G~~~~---l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~-~~~~--~~~~~~~~D~~~~s~hK~~~~p-~ 299 (480)
+++.+.++||||...+ +++|.++|++++++++.|++|.++...... .... .......--+++.|++|.++.+ .
T Consensus 193 vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~ 272 (420)
T 4h51_A 193 FILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSE 272 (420)
T ss_dssp EEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGG
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccC
Confidence 8899999999999854 788999999999999999999887542111 0000 0000001124566899987754 6
Q ss_pred cceEEEEeCchhhH--hhhcCCcccccccccccCcccCCCCccccCCCCCCchHHHHHHHHh--------cHHHHHHHHH
Q psy12303 300 QCSTIHFKQDGLLI--SCNQMSAEYLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRAK--------GDEGFEKQID 369 (480)
Q Consensus 300 ~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~~--------g~~~~~~~~~ 369 (480)
.+|++.+....... ....... .+.... ++ + ............+ -.+.++.+.+
T Consensus 273 RvG~~~~~~~~~~~~~~~~~~l~-~~~r~~-----------~s--~---~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~ 335 (420)
T 4h51_A 273 RAGTLSLLLKDKTKRADVKSVMD-SLIREE-----------YT--C---PPAHGARLAHLILSNNELRKEWEAELSAMAE 335 (420)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHH-HHHHTT-----------TS--S---CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecccCHHHHHHHHHHHH-Hhhhcc-----------cC--c---chHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 78998876552211 1100000 000000 00 0 1111222222211 1345667778
Q ss_pred HHHHHHHHHHHHHhcCC--CC-eEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHhcccEEEeeeeeC
Q psy12303 370 RLMELAEYMVKKIKSMP--DK-FYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQAGTMMVGYQPLN 446 (480)
Q Consensus 370 ~~~~l~~~l~~~l~~~~--~g-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~g~~~~~~~~~~ 446 (480)
+..++++.|.+.|++ . ++ +..+ .++.++|+|. ++ +.+..++|.+.|+ ++.+
T Consensus 336 r~~~~R~~l~~~L~~-~g~~~~~~~i-~~q~GmF~~~----gl---------------s~e~v~~L~e~~V-y~~~---- 389 (420)
T 4h51_A 336 RIRTMRRTVYDELLR-LQTPGSWEHV-INQIGMFSFL----GL---------------SKAQCEYCQNHNI-FITV---- 389 (420)
T ss_dssp HHHHHHHHHHHHHHH-TTCSSCCTHH-HHCCSSEEEC----CC---------------CHHHHHHHHHTTE-ECCT----
T ss_pred HHHHHHHHHHHHHHH-hCCCCCCCee-cCCCceEEec----Cc---------------CHHHHHHHHhCCE-EEcC----
Confidence 888899999999988 3 11 2222 3455666652 11 1233456666764 3322
Q ss_pred CcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 447 DLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 447 ~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
+ + |+++.. .+++.|++++++|.++++++
T Consensus 390 ~--g--Ris~Ag--l~~~ni~~~a~aI~~vvr~i 417 (420)
T 4h51_A 390 S--G--RANMAG--LTHETALMLAQTINDAVRNV 417 (420)
T ss_dssp T--C--EEEGGG--CCHHHHHHHHHHHHHHHC--
T ss_pred C--C--EEEecc--CCHHHHHHHHHHHHHHHHHh
Confidence 2 2 998654 58999999999999988763
No 235
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.47 E-value=8.6e-18 Score=167.40 Aligned_cols=311 Identities=11% Similarity=0.031 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHH---HH
Q psy12303 111 ILMETVVLEKMRQIIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCA---AV 187 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~---~~ 187 (480)
...+.++.+.++++++ ....++|++|||+||+.|++++|.. .| ++.+|......|.+...++ ..
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik~ar~~-------tg-----r~~ii~~~~~yHG~~~~~~sg~~~ 205 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALATATAI-------TG-----RKTVLAFDGGYHGGLLNFASGHAP 205 (465)
Confidence 4556677788888884 2346999999999999999998742 11 1324444555566554443 11
Q ss_pred cCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC----hHHHHHHHHHcCcEEEeeccc
Q psy12303 188 CGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP----IEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 188 ~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.|+.. .++.+|.+ |+++|++++++. +.++++|+++..++++|.+.| +++|.++|++||+++++|++|
T Consensus 206 ~g~~~-~~~~~~~~-----d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 276 (465)
T 2yky_A 206 TNAPY-HVVLGVYN-----DVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVM 276 (465)
Confidence 12211 23334432 788999999742 123888888877777998766 999999999999999999999
Q ss_pred cccccccccccCcccCCCCCCccceeCccccCCCcccceEEEEeCchhhHhhhcCCcccccccccccCcccCCCCccccC
Q psy12303 264 GGGLLLSKKYRHPRLTGIERADSVTWNPHKLMGTLLQCSTIHFKQDGLLISCNQMSAEYLFMQDKLYDVRYDTGDKVIQC 343 (480)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~D~~~~s~hK~~~~p~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (480)
+ + ........ ...++ .+|+++ +.|+++++.++|+++.+. ++++.........+.. .+++ +
T Consensus 277 ~-~-r~g~~~a~-~~~gv-~pDi~t--~sK~lg~G~piG~v~~~~-~i~~~l~~~~~g~~~~----------~~T~---~ 336 (465)
T 2yky_A 277 T-S-RLSGGGAQ-EMLGI-SADLTT--LGKYIGGGMSFGAFGGRR-DLMERFDPARDGAFAH----------AGTF---N 336 (465)
Confidence 9 5 22222111 22233 467765 679999878889887654 3443322100000000 0000 1
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEe--cCCceeEEEEEeecCccCCCchhhHHHH
Q psy12303 344 GRHNDIFKLWLQWRAKGDEGFEKQIDRLMELAEYMVKKIKSMPD-KFYLI--LEPEMVNVSFWYLPTRVRNMPHEKRLNI 420 (480)
Q Consensus 344 ~r~~~~l~~~~~l~~~g~~~~~~~~~~~~~l~~~l~~~l~~~~~-g~~~~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 420 (480)
+.+....++.++|+.+.. +.+.++..++.+++++.|++ .. ...+. .+..+.++.+.+......+.......+
T Consensus 337 ~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d- 411 (465)
T 2yky_A 337 NNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNR-IAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAAD- 411 (465)
Confidence 112233333444554433 24567777888888888876 31 22221 123344444443321111000000000
Q ss_pred hhhhhHHHHHHHHhcccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhcc
Q psy12303 421 LGEITPILKGRMMQAGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHD 479 (480)
Q Consensus 421 l~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~ 479 (480)
......+.+.|.++|+++... .. + . ++..+|++||++++++|++++++
T Consensus 412 -~~~~~~~~~~ll~~GV~v~p~-~~-~---~-----~s~~~t~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 412 -QQLKELFFFHMLRKGIYLAPR-GM-Y---A-----LSLEIADAGRDAFAEALADFIGE 459 (465)
Confidence 011246778888888554332 21 1 1 33568999999999999987764
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.59 E-value=2.8e-14 Score=151.76 Aligned_cols=324 Identities=11% Similarity=0.002 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHhCCC-CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCc-----cCCce-EEEecCCCchhHHHHHH
Q psy12303 114 ETVVLEKMRQIIGWQ-GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSA-----IKGQL-VMFTSDQCHYSVRSCAA 186 (480)
Q Consensus 114 e~~~~~~la~~~g~~-~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~-----~~g~~-~vl~~~~~h~s~~~~~~ 186 (480)
..++.+.|+++++-+ -..++|++|||+||..||++++.++ ....|... .|++. .|......|.....++.
T Consensus 426 ~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~---~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals 502 (831)
T 4a0g_A 426 ALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKF---CVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAME 502 (831)
T ss_dssp HHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHH---HHTTTC---------CCEEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHH---HhhcCCCccccccccCccEEEEecCCcccCceeeee
Confidence 345677788887643 3469999999999999999994211 11223210 01233 45556667888888887
Q ss_pred HcCCCC-----------C--------------CeEEeeCCCCCC---------CC------------------HHHHHHH
Q psy12303 187 VCGLGT-----------D--------------NCVEVPSDKRGR---------LI------------------PSELERL 214 (480)
Q Consensus 187 ~~g~~~-----------~--------------~v~~v~~~~~~~---------~d------------------~~~L~~~ 214 (480)
..|... . .+..++....++ -+ .++|++.
T Consensus 503 ~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 582 (831)
T 4a0g_A 503 AQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKH 582 (831)
T ss_dssp TSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHH
T ss_pred ccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHH
Confidence 766310 0 011222221100 01 2566666
Q ss_pred HHHHH--HCCCccEEEEeccC-CCccccccC----hHHHHHHHHHcCcEEEeeccccccccccccccCcccCCCCCCccc
Q psy12303 215 VLERK--AKGDIPFFVNCTSG-TTVLGAFDP----IEEIADICQKYNMWLHVDAAWGGGLLLSKKYRHPRLTGIERADSV 287 (480)
Q Consensus 215 i~~~~--~~~~~~~~v~~~~~-~~~~G~~~~----l~~I~~i~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~ 287 (480)
|++.. ..+..+++|++... +...|.+.+ +++|.++|++||+++|+|+++.++......+.. ...|+ ..|++
T Consensus 583 l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~-e~~gv-~PDii 660 (831)
T 4a0g_A 583 LQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTT-ELLGC-KPDIA 660 (831)
T ss_dssp C---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTH-HHHSS-CCSEE
T ss_pred HHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhh-HhcCC-CCcEE
Confidence 65421 22345889999886 788888765 899999999999999999999987554443333 33455 67988
Q ss_pred eeCccccCCCc-ccceEEEEeCchhhHhhhcCCcc-cccccccccCcccCCCCccccCCCCCCchHHHHHHHH---hcHH
Q psy12303 288 TWNPHKLMGTL-LQCSTIHFKQDGLLISCNQMSAE-YLFMQDKLYDVRYDTGDKVIQCGRHNDIFKLWLQWRA---KGDE 362 (480)
Q Consensus 288 ~~s~hK~~~~p-~~~g~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~r~~~~l~~~~~l~~---~g~~ 362 (480)
+ +.|.++++ .+.|+++++++ +.+........ .+.+ ..+.....+++.+++.. +..+
T Consensus 661 t--lsK~L~gG~~Plgav~~~~~-i~~~~~~~~~~~~~~h----------------g~T~~g~Pla~Aaala~L~~i~~~ 721 (831)
T 4a0g_A 661 C--FAKLLTGGMVPLAVTLATDA-VFDSFSGDSKLKALLH----------------GHSYSAHAMGCATAAKAIQWFKDP 721 (831)
T ss_dssp E--ECGGGGTTSSCCEEEEECHH-HHHTTCSSCGGGSCCC----------------CCTTTTCHHHHHHHHHHHHHHHCT
T ss_pred E--EecccccCccCcEEEEECHH-HHHHHhccccccccee----------------ecCCcccHHHHHHHHHHHHHHHhh
Confidence 7 56999876 47898887543 33322111000 0000 01111234444444433 2111
Q ss_pred HHHHHHHHHHHH--------HHHHHHHHhcCCCCeEEecCCceeEEEEEeecCccCCCchhhHHHHhhhhhHHHHHHHHh
Q psy12303 363 GFEKQIDRLMEL--------AEYMVKKIKSMPDKFYLILEPEMVNVSFWYLPTRVRNMPHEKRLNILGEITPILKGRMMQ 434 (480)
Q Consensus 363 ~~~~~~~~~~~l--------~~~l~~~l~~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~ 434 (480)
.+ .++..++ .+.+.+.+.+ .|.+.-+. ..+.++.+.+....... ... .....++.+.+.+
T Consensus 722 ~l---~~~~~~~~~~l~~~l~~~l~~~l~~-~~~v~~vr-g~Gl~~~iel~~~~~~~----~~~---~~~a~~~~~~l~e 789 (831)
T 4a0g_A 722 ET---NHNITSQGKTLRELWDEELVQQISS-HSAVQRVV-VIGTLFALELKADASNS----GYA---SLYAKSLLIMLRE 789 (831)
T ss_dssp TT---CTTBCTTSSBBCCCSCHHHHHHHHH-STTEEEEE-EETTEEEEEEC----------------CHHHHHHHHHHHH
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHhh-CCCceeEe-ecccEEEEEEecCcccc----ccc---hHHHHHHHHHHHH
Confidence 11 1222111 2235556667 67665432 33344444443211000 000 0113467788889
Q ss_pred cccEEEeeeeeCCcccEEEEecccCCCCHHHHHHHHHHHHHhhccC
Q psy12303 435 AGTMMVGYQPLNDLPNFFRNIISSAAVTEGDIDFLLTEMDRLGHDL 480 (480)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~R~~~~~~~~t~~di~~~~~~l~~~~~~l 480 (480)
+|.++... .+.+|++ +++.+|++||++++++|+++++++
T Consensus 790 ~Gv~v~p~------g~~lrl~-pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 790 DGIFTRPL------GNVIYLM-CGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp TTEECCCB------TTEEEEE-CCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred CCcEEEec------CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 98544321 4699999 888999999999999999987753
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=74.50 E-value=4.9 Score=34.09 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=40.2
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
-|..++=.+-.|..|..|++....+..|.....+++.+++++||+.++.
T Consensus 146 TEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 146 TEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp HHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4556665566788899999887767889999999999999999997753
No 238
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=69.67 E-value=49 Score=28.58 Aligned_cols=68 Identities=15% Similarity=0.039 Sum_probs=48.1
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA 247 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~ 247 (480)
+..++.....-+.....+.++|. ++.....+ +.+++++.+++.+++|.. +|+. + .-..
T Consensus 108 kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-----~~ee~~~~i~~l~~~G~~--vVVG--~----------~~~~ 165 (225)
T 2pju_A 108 SIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-----TEEDARGQINELKANGTE--AVVG--A----------GLIT 165 (225)
T ss_dssp CEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-----SHHHHHHHHHHHHHTTCC--EEEE--S----------HHHH
T ss_pred cEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-----CHHHHHHHHHHHHHCCCC--EEEC--C----------HHHH
Confidence 44566666666677888888988 66666655 788899999998888844 4554 1 1237
Q ss_pred HHHHHcCcEE
Q psy12303 248 DICQKYNMWL 257 (480)
Q Consensus 248 ~i~~~~~~~l 257 (480)
++|+++|+.-
T Consensus 166 ~~A~~~Gl~~ 175 (225)
T 2pju_A 166 DLAEEAGMTG 175 (225)
T ss_dssp HHHHHTTSEE
T ss_pred HHHHHcCCcE
Confidence 7889998763
No 239
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=67.69 E-value=40 Score=28.41 Aligned_cols=68 Identities=16% Similarity=0.198 Sum_probs=43.7
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHH
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIA 247 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~ 247 (480)
+..++.....-+.....+.++|. ++.....+ +.+++++.+++.+++|.. +|+. + .-..
T Consensus 96 kIavvg~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~i~~l~~~G~~--vvVG--~----------~~~~ 153 (196)
T 2q5c_A 96 ELALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-----SEDEITTLISKVKTENIK--IVVS--G----------KTVT 153 (196)
T ss_dssp EEEEEEESSCSSCHHHHHHHHTC---EEEEEEEC-----SGGGHHHHHHHHHHTTCC--EEEE--C----------HHHH
T ss_pred cEEEEeCcchhhHHHHHHHHhCC---ceEEEEeC-----CHHHHHHHHHHHHHCCCe--EEEC--C----------HHHH
Confidence 43455555556667778888887 55555554 566778888887777744 4554 1 1236
Q ss_pred HHHHHcCcEE
Q psy12303 248 DICQKYNMWL 257 (480)
Q Consensus 248 ~i~~~~~~~l 257 (480)
++|+++|+.-
T Consensus 154 ~~A~~~Gl~~ 163 (196)
T 2q5c_A 154 DEAIKQGLYG 163 (196)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHHcCCcE
Confidence 7788888753
No 240
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=66.43 E-value=12 Score=31.69 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHCCCccEEEEeccC-CCccccccChHHHHHHHHHcCcEEEe
Q psy12303 210 ELERLVLERKAKGDIPFFVNCTSG-TTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 210 ~L~~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.-|.+++=.+-.|..|..|++... .+..|.....+++.+++++||+.++.
T Consensus 144 hTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 144 HTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp HHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 446666666667888999888772 46789999999999999999998753
No 241
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=64.81 E-value=9.2 Score=35.04 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=39.9
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 25 TPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 25 TPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45677899999999999998888875544444333333333334445566665553 467766
No 242
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=63.97 E-value=53 Score=29.57 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=48.6
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +++.+. ..++....+.+|.+.++..++++ +.+|+.....++ +-+..
T Consensus 181 ~~v~---~H~af~Yf~~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~ 245 (286)
T 3gi1_A 181 TFVT---QHTAFSYLAKRFGL---KQLGISGISPEQEPSPRQLKEIQDFVKEYN--VKTIFAEDNVNP-------KIAHA 245 (286)
T ss_dssp EEEE---EESCCHHHHHHTTC---EEEEEECSCC---CCHHHHHHHHHHHHHTT--CCEEEECTTSCT-------HHHHH
T ss_pred EEEE---ECCchHHHHHHCCC---eEeeccccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh-------HHHHH
Confidence 5555 58888999999999 555443 34455678888888887776665 556666544332 34456
Q ss_pred HHHHcCcEEE
Q psy12303 249 ICQKYNMWLH 258 (480)
Q Consensus 249 i~~~~~~~l~ 258 (480)
++++.|+.+.
T Consensus 246 la~~~g~~v~ 255 (286)
T 3gi1_A 246 IAKSTGAKVK 255 (286)
T ss_dssp HHHTTTCEEE
T ss_pred HHHHhCCeEE
Confidence 7888898765
No 243
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=63.47 E-value=8.1 Score=35.52 Aligned_cols=63 Identities=11% Similarity=-0.052 Sum_probs=42.6
Q ss_pred EeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 197 EVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 197 ~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
..|.++++.+|.+.+++.++...++|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 17 vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 17 PTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred eCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 346678899999999999998888886655555544444444445555666666554 356655
No 244
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=62.79 E-value=14 Score=31.89 Aligned_cols=49 Identities=16% Similarity=0.047 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 210 ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 210 ~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.-|..++=.+-.|..|..|++..- +..|.....+++.++|++||+.++.
T Consensus 164 HTEaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 164 HTEMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 345566656667888999988887 5679999999999999999988753
No 245
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=61.92 E-value=11 Score=34.51 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=38.7
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 21 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 21 TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999998888875543333333333333333445555555543 467766
No 246
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=61.78 E-value=12 Score=34.29 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=37.8
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 26 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 26 TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 35567899999999999998888775433333333333333333445555655543 366654
No 247
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=61.37 E-value=9.9 Score=34.69 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=38.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35577899999999999998888875543333333333333334445566655543 466666
No 248
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=60.84 E-value=58 Score=29.43 Aligned_cols=74 Identities=8% Similarity=0.075 Sum_probs=50.9
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +...+. +.++....+.+|.+.++..++++. .+|+.....++ +-+..
T Consensus 185 ~~v~---~H~af~Yf~~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v--~~if~e~~~~~-------~~~~~ 249 (294)
T 3hh8_A 185 LIVT---SEGCFKYFSKAYGV---PSAYIWEINTEEEGTPDQISSLIEKLKVIKP--SALFVESSVDR-------RPMET 249 (294)
T ss_dssp CEEE---EESCCHHHHHHHTC---CEEEEESSCCSCCCCHHHHHHHHHHHHHSCC--SCEEEETTSCS-------HHHHH
T ss_pred EEEE---ECChHHHHHHHcCC---ceeeccccCCCCCCCHHHHHHHHHHHHHcCC--CEEEEeCCCCc-------HHHHH
Confidence 4555 58888899999999 555543 445567888999888887777664 45555443322 45667
Q ss_pred HHHHcCcEEE
Q psy12303 249 ICQKYNMWLH 258 (480)
Q Consensus 249 i~~~~~~~l~ 258 (480)
++++.|+.+.
T Consensus 250 ia~~~g~~v~ 259 (294)
T 3hh8_A 250 VSKDSGIPIY 259 (294)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHhCCcEE
Confidence 7899998764
No 249
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.69 E-value=11 Score=34.18 Aligned_cols=62 Identities=15% Similarity=0.186 Sum_probs=38.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHH-CCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKA-KGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~-~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+ .|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 13 VSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred cCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 35567899999999999998888 775543344333333333334445555655543 466664
No 250
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.63 E-value=11 Score=34.71 Aligned_cols=62 Identities=19% Similarity=0.071 Sum_probs=40.8
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc--CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY--NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~--~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 18 TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 35577899999999999999888886544444444433333334445666666554 577776
No 251
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=60.06 E-value=18 Score=31.09 Aligned_cols=49 Identities=22% Similarity=0.115 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 210 ELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 210 ~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.-|.+++=.+-.|..|..|++... +..|.....+++.+++++||+.++.
T Consensus 153 hTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 153 HTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 345566656667888988888766 6679999999999999999987753
No 252
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=59.78 E-value=67 Score=28.94 Aligned_cols=73 Identities=14% Similarity=0.057 Sum_probs=47.9
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI 249 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i 249 (480)
.+++ .|.++...++.+|+ +.+.+.. .+....+..|.+.++..++++ +.+|+.....++ +-+..|
T Consensus 192 ~~v~---~H~af~Yf~~~yGl---~~~~~~~-~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~~-------~~~~~i 255 (291)
T 1pq4_A 192 KFIV---FHPSWAYFARDYNL---VQIPIEV-EGQEPSAQELKQLIDTAKENN--LTMVFGETQFST-------KSSEAI 255 (291)
T ss_dssp EEEE---SSCCCHHHHHHTTC---EEEESCB-TTBCCCHHHHHHHHHHHHTTT--CCEEEEETTSCC-------HHHHHH
T ss_pred EEEE---ECCchHHHHHHCCC---EEeeccc-CCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh-------HHHHHH
Confidence 5655 57788889999998 5554432 235678888988888776655 456666544332 233456
Q ss_pred HHHcCcEEE
Q psy12303 250 CQKYNMWLH 258 (480)
Q Consensus 250 ~~~~~~~l~ 258 (480)
+++.|+.++
T Consensus 256 a~~~g~~v~ 264 (291)
T 1pq4_A 256 AAEIGAGVE 264 (291)
T ss_dssp HHHHTCEEE
T ss_pred HHHcCCeEE
Confidence 888887653
No 253
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=58.63 E-value=12 Score=34.30 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=36.5
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 5567899999999999998888875433333333322222333344555555543 356554
No 254
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=58.26 E-value=11 Score=34.63 Aligned_cols=62 Identities=15% Similarity=0.030 Sum_probs=40.9
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 24 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 24 TPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 45677899999999999998877775544444444433333444456677777664 466665
No 255
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=57.69 E-value=14 Score=34.59 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=38.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...++|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 69 TPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 69 TPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45677899999999999998888885533333333333333334444555555443 467766
No 256
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=56.86 E-value=54 Score=29.41 Aligned_cols=75 Identities=8% Similarity=-0.003 Sum_probs=48.6
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADI 249 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i 249 (480)
.+++ .|.++...++.+|+.. +-.+...++...++.+|.+.++..++++ +++|+.....++ +-+..+
T Consensus 176 ~~v~---~H~af~Yf~~~yGl~~--~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~i 241 (284)
T 2prs_A 176 GYFV---FHDAYGYFEKQFGLTP--LGHFTVNPEIQPGAQRLHEIRTQLVEQK--ATCVFAEPQFRP-------AVVESV 241 (284)
T ss_dssp CEEE---EESCCHHHHHHHTCCC--CEEEESSTTSCCCHHHHHHHHHHHHHTT--CCEEEECTTSCS-------HHHHHH
T ss_pred eEEE---ECccHHHHHHHCCCeE--eEeeccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh-------HHHHHH
Confidence 4555 5888889999999842 2223445556778888888887766655 456666544322 344556
Q ss_pred HHHcCcEEE
Q psy12303 250 CQKYNMWLH 258 (480)
Q Consensus 250 ~~~~~~~l~ 258 (480)
+++.|+.+.
T Consensus 242 a~~~g~~v~ 250 (284)
T 2prs_A 242 ARGTSVRMG 250 (284)
T ss_dssp TTTSCCEEE
T ss_pred HHHcCCeEE
Confidence 778887763
No 257
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=56.80 E-value=8.6 Score=35.45 Aligned_cols=62 Identities=18% Similarity=0.062 Sum_probs=39.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 34 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 34 TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35577899999999999999888886543444333333333334445566666553 466665
No 258
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=56.76 E-value=10 Score=34.41 Aligned_cols=62 Identities=16% Similarity=0.119 Sum_probs=37.9
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 11 TPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 35677899999999999988777775433333333333332334445566665553 466665
No 259
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=56.63 E-value=9.3 Score=35.22 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=38.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 32 TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 32 TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999998888885543333333333333334445566665553 466665
No 260
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=56.61 E-value=12 Score=34.70 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=38.0
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999998877775433333333333332333445555555543 467766
No 261
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=56.39 E-value=37 Score=29.16 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=53.0
Q ss_pred chhHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcC
Q psy12303 178 HYSVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYN 254 (480)
Q Consensus 178 h~s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~ 254 (480)
--+++.++.++ .+|...+.+.|.. |.-.+++|+...+...++|. .+ -|||-+ +++++|.++|.+.|
T Consensus 144 ~V~vetAiaml~dmG~~SvKffPm~--Gl~~l~E~~avAka~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~aG 212 (249)
T 3m0z_A 144 IVPLETAIALLKDMGGSSIKYFPMG--GLKHRAEFEAVAKACAAHDF-----WL----EPTGGIDLENYSEILKIALDAG 212 (249)
T ss_dssp EEEHHHHHHHHHHTTCCEEEECCCT--TTTTHHHHHHHHHHHHHTTC-----EE----EEBSSCCTTTHHHHHHHHHHHT
T ss_pred eeeHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhhHHHHHHHHHHcC
Confidence 34567777665 3555578888875 44467888888887777664 22 578877 68999999999999
Q ss_pred cEEEeeccc
Q psy12303 255 MWLHVDAAW 263 (480)
Q Consensus 255 ~~l~vD~a~ 263 (480)
+..++=-.|
T Consensus 213 v~~viPHIY 221 (249)
T 3m0z_A 213 VSKIIPHIY 221 (249)
T ss_dssp CSCBCCBCC
T ss_pred CCeeccccc
Confidence 876554333
No 262
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=56.30 E-value=37 Score=32.09 Aligned_cols=61 Identities=10% Similarity=-0.042 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHHCCCccEEEEeccCC-Ccc-c-cccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 206 LIPSELERLVLERKAKGDIPFFVNCTSGT-TVL-G-AFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 206 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~-G-~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
.++++++.+++.....|..-.+++-+..+ .++ + ...++..|..+.+..++++++|..|+.|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 68999999998877666543333333122 222 1 2247888988888889999999999876
No 263
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=56.09 E-value=10 Score=34.90 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=38.5
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 33 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 33 TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35677899999999999998877775433333333333333334445566655543 366666
No 264
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=55.88 E-value=14 Score=34.57 Aligned_cols=64 Identities=14% Similarity=0.046 Sum_probs=39.8
Q ss_pred EEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 196 VEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 196 ~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
...|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 39 lvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 39 VSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp ECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred eECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3456677899999999999998888876544444444433333334445555555543 355554
No 265
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=55.53 E-value=11 Score=34.76 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=40.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 17 TPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp CCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999998888876544444444444433444455666666654 356665
No 266
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=55.38 E-value=11 Score=34.18 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=36.4
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 11 TPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999988777775433333333333222333345555555543 355554
No 267
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=54.38 E-value=70 Score=28.20 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=53.0
Q ss_pred HhCCCCCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCC
Q psy12303 124 IIGWQGGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKR 203 (480)
Q Consensus 124 ~~g~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~ 203 (480)
+|.+.. .+++.+||+.++=.++.....+ .| - .|++....-....+.++.+.....++..+.+|-
T Consensus 4 ~f~L~g-KvalVTGas~GIG~aia~~la~-------~G------a-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv- 67 (255)
T 4g81_D 4 LFDLTG-KTALVTGSARGLGFAYAEGLAA-------AG------A-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDV- 67 (255)
T ss_dssp TTCCTT-CEEEETTCSSHHHHHHHHHHHH-------TT------C-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-
T ss_pred CcCCCC-CEEEEeCCCcHHHHHHHHHHHH-------CC------C-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-
Confidence 444443 3555556665554444333221 23 2 344443333334444433321112677777663
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
-|.+++++.+++..++-.+.-+++-++|....+.+
T Consensus 68 --~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~ 102 (255)
T 4g81_D 68 --TDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPM 102 (255)
T ss_dssp --TCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCG
T ss_pred --CCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCh
Confidence 37888888888877665556677777776655544
No 268
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=51.69 E-value=55 Score=29.36 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=48.2
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +.+.+. ..++....+.+|.+.++..++++ +.+|+.....++ +-+..
T Consensus 179 ~~v~---~H~af~Yf~~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~-------~~~~~ 243 (284)
T 3cx3_A 179 TFVT---QHTAFSYLAKRFGL---NQLGIAGISPEQEPSPRQLTEIQEFVKTYK--VKTIFTESNASS-------KVAET 243 (284)
T ss_dssp CEEE---EESCCHHHHHHTTC---CEEEEECSSTTCCCCSHHHHHHHHHHHHTT--CCCEEECSSSCC-------HHHHH
T ss_pred EEEE---ECCchHHHHHHcCC---EEeeccCCCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCc-------HHHHH
Confidence 4555 58888899999999 555443 34455678888888887766655 446666544332 34555
Q ss_pred HHHHcCcEE
Q psy12303 249 ICQKYNMWL 257 (480)
Q Consensus 249 i~~~~~~~l 257 (480)
++++.|+.+
T Consensus 244 ia~~~g~~v 252 (284)
T 3cx3_A 244 LVKSTGVGL 252 (284)
T ss_dssp HHSSSSCCE
T ss_pred HHHHcCCeE
Confidence 688888765
No 269
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=51.22 E-value=16 Score=33.08 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=35.6
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.++++ +|.+.+++.++...++|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 556788 999999999998888775533333333333333333445555555543 355554
No 270
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=50.81 E-value=1.5e+02 Score=27.21 Aligned_cols=86 Identities=10% Similarity=0.105 Sum_probs=48.4
Q ss_pred ceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHH-HHHHHHHH-HCCCccEEEEeccCCCccc------c
Q psy12303 168 QLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSEL-ERLVLERK-AKGDIPFFVNCTSGTTVLG------A 239 (480)
Q Consensus 168 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L-~~~i~~~~-~~~~~~~~v~~~~~~~~~G------~ 239 (480)
..+++++...-..- .-++.+|+...++.....+ +.+++ .+.++... -+...|.+|++...++..- .
T Consensus 59 ~~vlyId~E~s~~~-~ra~~lGvd~d~llv~~~~-----~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~ 132 (333)
T 3io5_A 59 AVCLFYDSEFGITP-AYLRSMGVDPERVIHTPVQ-----SLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDA 132 (333)
T ss_dssp CEEEEEESSCCCCH-HHHHHTTCCGGGEEEEECS-----BHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC------
T ss_pred ceEEEEeccchhhH-HHHHHhCCCHHHeEEEcCC-----CHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCc
Confidence 44777775443333 3467788876677666543 45554 33333220 1223488999888877652 1
Q ss_pred ccC---------------hHHHHHHHHHcCcEEEe
Q psy12303 240 FDP---------------IEEIADICQKYNMWLHV 259 (480)
Q Consensus 240 ~~~---------------l~~I~~i~~~~~~~l~v 259 (480)
..+ +.++..+++++|+.+++
T Consensus 133 ~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~ 167 (333)
T 3io5_A 133 LNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIA 167 (333)
T ss_dssp --------CTHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 111 33456678999987654
No 271
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=50.14 E-value=69 Score=29.20 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=49.6
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +...+. ..++....+.+|.+.++..++++ +++|+.....++ +-+..
T Consensus 192 ~~v~---~H~af~Yfa~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~~-------~~~~~ 256 (312)
T 2o1e_A 192 EFIT---QHTAFGYLAKEYGL---KQVPIAGLSPDQEPSAASLAKLKTYAKEHN--VKVIYFEEIASS-------KVADT 256 (312)
T ss_dssp EEEE---SSCTTHHHHHHTTC---EEEECSSCCSSSCCCHHHHHHHHHHTTSSC--CCEEECSSCCCH-------HHHHH
T ss_pred EEEE---ECCchHHHHHHCCC---eEEEeeccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh-------HHHHH
Confidence 5655 58888999999999 544443 33456788999998888765544 556666544332 45566
Q ss_pred HHHHcCcEE
Q psy12303 249 ICQKYNMWL 257 (480)
Q Consensus 249 i~~~~~~~l 257 (480)
|+++.|+.+
T Consensus 257 ia~e~g~~v 265 (312)
T 2o1e_A 257 LASEIGAKT 265 (312)
T ss_dssp HHHHTCCEE
T ss_pred HHHHhCCcE
Confidence 688888876
No 272
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=50.00 E-value=16 Score=33.21 Aligned_cols=56 Identities=11% Similarity=-0.045 Sum_probs=35.7
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+.
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 13 TPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 35567899999999999998888875543333333333333334455666666654
No 273
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=49.07 E-value=20 Score=33.40 Aligned_cols=59 Identities=17% Similarity=-0.076 Sum_probs=35.7
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh---HHHHHHHHHcCcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI---EEIADICQKYNMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l---~~I~~i~~~~~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++. |||--+..... .++.+.+-.-++++++
T Consensus 36 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~---GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGMSAVVYC---GSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEES---SGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeC---ccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 35567899999999999998888875543333 44434444443 4444442223455554
No 274
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=48.88 E-value=26 Score=30.30 Aligned_cols=48 Identities=13% Similarity=0.014 Sum_probs=37.5
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCc-----------cccccChHHHHHHHHHcCcEEEe
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTV-----------LGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~-----------~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
-|.+++=.+-.|..|..|++... +. .|.....+++.+++++||+.++.
T Consensus 154 TEAaVDLarLAGl~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 154 TEAGVELCRLAGKRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp HHHHHHHHHHTTCCSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 35566655667888888887766 44 68999999999999999998754
No 275
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=48.69 E-value=49 Score=30.14 Aligned_cols=73 Identities=14% Similarity=0.255 Sum_probs=51.1
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEe-eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEV-PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v-~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +...+ ++.++....+.+|.+.++..++++ +++|+.....++ +-+..
T Consensus 192 ~~v~---~H~af~Yfa~~yGl---~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~--v~~If~e~~~~~-------k~~~~ 256 (307)
T 3ujp_A 192 FLVS---CEGAFSYLARDYGM---EEIYMWPINAEQQFTPKQVQTVIEEVKTNN--VPTIFCESTVSD-------KGQKQ 256 (307)
T ss_dssp EEEE---EESTTHHHHHHTTC---EEEEEESSCCSSCCCHHHHHHHHHHHHTTT--CSEEEEETTSCS-------HHHHH
T ss_pred EEEE---ECchHHHHHHHCCC---cEEEeeccCCCCCCCHHHHHHHHHHHHhcC--CcEEEEeCCCCh-------HHHHH
Confidence 4554 68889999999999 44444 455566788999998888776655 446666544332 55667
Q ss_pred HHHHcCcEE
Q psy12303 249 ICQKYNMWL 257 (480)
Q Consensus 249 i~~~~~~~l 257 (480)
++++.|+.+
T Consensus 257 ia~e~g~~v 265 (307)
T 3ujp_A 257 VAQATGARF 265 (307)
T ss_dssp TTTTTCCEE
T ss_pred HHHHhCCce
Confidence 788888875
No 276
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=48.20 E-value=13 Score=34.31 Aligned_cols=59 Identities=15% Similarity=0.035 Sum_probs=33.8
Q ss_pred eeCCC-CCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDK-RGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++ ++.+|.+.+++.++...+.|..-. +..|||--+.. +.-.++.+.+.+. ++++++
T Consensus 21 TPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl---~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 21 TPFRKSDGSIDWHHYKETVDRIVDNGIDVI---VPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp CCBCTTTCCBCHHHHHHHHHHHHTTTCCEE---CTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCccCCCCCCCHHHHHHHHHHHHHcCCCEE---EeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45567 788888888888887777764422 22343333333 3334455555443 356554
No 277
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=47.65 E-value=14 Score=33.44 Aligned_cols=53 Identities=28% Similarity=0.270 Sum_probs=34.2
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccccc---ChHHHHHHHHHc
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFD---PIEEIADICQKY 253 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---~l~~I~~i~~~~ 253 (480)
.|.++++.+|.+.+++.++...++|..-.++. |||--+... .-.++.+.+.+.
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~---GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 9 TPFDKQGKVNVDALKTHAKNLLEKGIDAIFVN---GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEET---STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC---ccccChhhCCHHHHHHHHHHHHHH
Confidence 35567899999999999998888875433333 444444443 345555555554
No 278
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=47.33 E-value=8.8 Score=37.65 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=29.2
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.++..|+.++++++++-|+++||.|++|.+..-
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 467889999999999999999999999986543
No 279
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=47.01 E-value=15 Score=33.86 Aligned_cols=59 Identities=14% Similarity=-0.068 Sum_probs=37.2
Q ss_pred eeC-CCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccC---hHHHHHHHHHc---CcEEEe
Q psy12303 198 VPS-DKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDP---IEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~-~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~---l~~I~~i~~~~---~~~l~v 259 (480)
.|. ++++.+|.+.+++.++...+.|..- ++..|||--+.... -.++.+.+.+. ++++++
T Consensus 21 TPF~~~dg~iD~~~l~~lv~~li~~Gv~g---l~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 21 VPFLEGTREIDWKGLDDNVEFLLQNGIEV---IVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp CCBCTTTCCBCHHHHHHHHHHHHHTTCSE---ECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHcCCCE---EEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 466 7789999999999999888877543 22344444444333 44555555543 467766
No 280
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=46.71 E-value=9.5 Score=34.87 Aligned_cols=59 Identities=19% Similarity=0.133 Sum_probs=37.4
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHc---CcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~---~~~l~v 259 (480)
.|.++++.+|.+.+++.++...+.|..-.++ .|||--+.. +.-.++.+.+.+. ++++++
T Consensus 14 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v---~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 14 SPVDAEGRVRADVMGRLCDDLIQAGVHGLTP---LGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSCBBT---TSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEE---CccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3567789999999999999888877543333 344444444 3344555555553 355555
No 281
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=46.67 E-value=17 Score=32.95 Aligned_cols=56 Identities=21% Similarity=0.086 Sum_probs=34.5
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
.|.++++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+.
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 9 TPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 35567899999999999998888875433333333322222333445566666554
No 282
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=46.11 E-value=13 Score=34.27 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=39.2
Q ss_pred eCC-CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSD-KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.+ +++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 21 Pf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 21 FFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp CEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 456 7889999999999998888775544444444433333344455566666554 466666
No 283
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=44.65 E-value=90 Score=27.79 Aligned_cols=92 Identities=17% Similarity=0.101 Sum_probs=51.6
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHH
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSE 210 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~ 210 (480)
.+++.+||+.++=.++.....+ .| -.++++.. .-......++.+|. ++..++.|- -|.++
T Consensus 30 KvalVTGas~GIG~aiA~~la~-------~G------a~V~i~~r-~~~~l~~~~~~~g~---~~~~~~~Dv---~~~~~ 89 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVA-------EG------ARVFITGR-RKDVLDAAIAEIGG---GAVGIQADS---ANLAE 89 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-------TT------CEEEEEES-CHHHHHHHHHHHCT---TCEEEECCT---TCHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHH-------CC------CEEEEEEC-CHHHHHHHHHHcCC---CeEEEEecC---CCHHH
Confidence 3556566665554444333222 33 32555543 33445666666664 566677663 37788
Q ss_pred HHHHHHHHHHCCCccEEEEeccCCCccccccC
Q psy12303 211 LERLVLERKAKGDIPFFVNCTSGTTVLGAFDP 242 (480)
Q Consensus 211 L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~ 242 (480)
+++.+++..++-.+.-+++-+++....+.+.+
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~ 121 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGE 121 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCCCCCCCTTS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence 88887765544334667777777666655543
No 284
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=44.51 E-value=30 Score=30.10 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=50.1
Q ss_pred hHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc--cChHHHHHHHHHcCcE
Q psy12303 180 SVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF--DPIEEIADICQKYNMW 256 (480)
Q Consensus 180 s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~~l~~I~~i~~~~~~~ 256 (480)
+++.++.++ .+|...+.+.|.. |.-.+++|+...+...++|. .+ -|||-+ +++++|.++|.+.|+.
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~--Gl~~leEl~avAkAca~~g~-----~l----EPTGGIdl~Nf~~I~~i~l~aGv~ 237 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMK--GLAHEEEYRAVAKACAEEGF-----AL----EPTGGIDKENFETIVRIALEANVE 237 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCT--TTTTHHHHHHHHHHHHHHTC-----EE----EEBSSCCTTTHHHHHHHHHHTTCS
T ss_pred eHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhHHHHHHHHHHHcCCC
Confidence 467776665 3444577888875 44467888877777666553 22 578877 6899999999999986
Q ss_pred EEeeccc
Q psy12303 257 LHVDAAW 263 (480)
Q Consensus 257 l~vD~a~ 263 (480)
.++=-+|
T Consensus 238 ~viPHIY 244 (275)
T 3m6y_A 238 QVIPHVY 244 (275)
T ss_dssp CBCCEEC
T ss_pred eeccccc
Confidence 6543333
No 285
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=44.13 E-value=18 Score=32.73 Aligned_cols=60 Identities=10% Similarity=0.010 Sum_probs=33.6
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.+ ++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 12 PFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp CEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445 788888888888888777775433333333333222333344555555443 356554
No 286
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=42.35 E-value=27 Score=26.89 Aligned_cols=43 Identities=16% Similarity=-0.032 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
..+...+.+++..+.|.+ .|+++.|.. =+++.++|+++|+.++
T Consensus 67 p~~~v~~~v~e~~~~g~k--~v~~~~G~~-------~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPK--RVIFNPGTE-------NEELEEILSENGIEPV 109 (122)
T ss_dssp CHHHHGGGHHHHHHHCCS--EEEECTTCC-------CHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHhcCCC--EEEECCCCC-------hHHHHHHHHHcCCeEE
Confidence 445666666666666644 577776632 2799999999999987
No 287
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=41.70 E-value=17 Score=33.16 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=36.8
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc----CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY----NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~----~~~l~v 259 (480)
|. +++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 19 Pf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 19 PF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp CE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred Cc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 44 5789999999999998888875533333333333322334445556655543 477776
No 288
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.00 E-value=20 Score=32.53 Aligned_cols=60 Identities=18% Similarity=0.219 Sum_probs=34.3
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.+ ++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. .+++++
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 12 PFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp CEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 446 788999999999988877775433333333322222233344555555543 366654
No 289
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=40.85 E-value=13 Score=36.15 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=27.5
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|+.++++++++-|+++|+.|++|.++-
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 45667888999999999999999999998654
No 290
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=38.78 E-value=20 Score=32.76 Aligned_cols=60 Identities=23% Similarity=0.186 Sum_probs=36.3
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.+ ++.+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 24 Pf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 24 PFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp CEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 456 889999999999998888875533333333333333333445555655543 355554
No 291
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=38.70 E-value=50 Score=32.74 Aligned_cols=30 Identities=10% Similarity=-0.024 Sum_probs=26.7
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|+.++++++++-|+++|+.|++|.+..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 677899999999999999999999997543
No 292
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=36.63 E-value=9.6 Score=34.51 Aligned_cols=57 Identities=16% Similarity=0.079 Sum_probs=34.2
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccCh---HHHHHHHHHcCcEEEe
Q psy12303 198 VPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPI---EEIADICQKYNMWLHV 259 (480)
Q Consensus 198 v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l---~~I~~i~~~~~~~l~v 259 (480)
.|.++++.+|.+.+++.++...++ ..-.+ ..|||--+..... .++.+.+.+ ++++++
T Consensus 8 TPf~~dg~iD~~~l~~lv~~li~~-v~gl~---v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 8 TPFDREGRLDEEAFRELAQALEPL-VDGLL---VYGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHGGG-SSCCE---ETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHhh-CCEEE---ECCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 456778999999999999876554 32222 3355444544444 444455445 555553
No 293
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=36.60 E-value=1.2e+02 Score=27.62 Aligned_cols=74 Identities=14% Similarity=0.245 Sum_probs=50.4
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEe-eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEV-PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v-~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +...+ ...++....+.+|.+.++..++++ +.+|+.....++ +-+..
T Consensus 206 ~~v~---~H~af~Yfa~~yGL---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~~-------~~~~~ 270 (321)
T 1xvl_A 206 FLVS---CEGAFSYLARDYGM---EEIYMWPINAEQQFTPKQVQTVIEEVKTNN--VPTIFCESTVSD-------KGQKQ 270 (321)
T ss_dssp EEEE---EESTTHHHHHHTTC---EEEEEESSSSSCSCCHHHHHHHHHHHHTTT--CSEEEEETTSCS-------HHHHH
T ss_pred EEEE---ECchHHHHHHHCCC---eEEEeeccCCCCCCCHHHHHHHHHHHHHcC--CcEEEEeCCCCh-------HHHHH
Confidence 4555 58889999999999 44444 344556788999988888776655 446666544332 44456
Q ss_pred HHHHcCcEEE
Q psy12303 249 ICQKYNMWLH 258 (480)
Q Consensus 249 i~~~~~~~l~ 258 (480)
++++.|+.+.
T Consensus 271 iA~e~g~~v~ 280 (321)
T 1xvl_A 271 VAQATGARFG 280 (321)
T ss_dssp HHTTTCCEEE
T ss_pred HHHhcCCcee
Confidence 6888998863
No 294
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=36.55 E-value=17 Score=30.67 Aligned_cols=49 Identities=12% Similarity=0.148 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC--cEEEeecccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN--MWLHVDAAWGGG 266 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~--~~l~vD~a~~~~ 266 (480)
|.++|+++++.. ...|++ -.|.+..++++.+.+|++| +.+|+|-..|..
T Consensus 18 ~~~~l~~al~s~------~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls 68 (192)
T 3kts_A 18 NQKDMEKILELD------LTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNGLK 68 (192)
T ss_dssp SSHHHHHHTTSS------CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEETCC
T ss_pred CHHHHHHHHcCC------CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhccC
Confidence 678899888653 334444 2467789999999999997 566777766553
No 295
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=36.32 E-value=1.2e+02 Score=26.77 Aligned_cols=62 Identities=15% Similarity=-0.031 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHCCCccEEEEeccCC---CccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 206 LIPSELERLVLERKAKGDIPFFVNCTSGT---TVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 206 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~---~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
.+++++..+++.....|..-..++-..++ +..=...++..|..+.+..++++|+|..|+.+.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 38999999998776666543344442211 222222467888888888799999999999764
No 296
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=36.15 E-value=18 Score=35.52 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=27.3
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|+.++++++++.|+++|+.|++|.+..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44567888899999999999999999998654
No 297
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=35.85 E-value=18 Score=34.89 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=24.5
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|..++++++++-|+++|+.|++|.+..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34556777788888888888888888887553
No 298
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=35.78 E-value=18 Score=35.41 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=27.3
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|+.++++++++-|+++|+.|++|.+..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44557888889999999999999999998654
No 299
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=35.35 E-value=19 Score=35.39 Aligned_cols=32 Identities=9% Similarity=0.042 Sum_probs=27.5
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|+.++++++++-|+++|+.|++|.+..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 44567888899999999999999999998654
No 300
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.94 E-value=19 Score=35.68 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=27.3
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.....|+.++++++++.|+++|+.|++|.+..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 34557888899999999999999999998654
No 301
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=34.57 E-value=1.6e+02 Score=25.68 Aligned_cols=78 Identities=9% Similarity=0.075 Sum_probs=49.8
Q ss_pred EEEecCCC-ch-hHHHHHHHcCCCCCCeEEeeCC--------CCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 170 VMFTSDQC-HY-SVRSCAAVCGLGTDNCVEVPSD--------KRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 170 ~vl~~~~~-h~-s~~~~~~~~g~~~~~v~~v~~~--------~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
.|+.+..+ +. .+....+..+. .+..+|+. ..+.|++++..++++.. .++.++.+|-.+..-.
T Consensus 162 ~i~~~GDt~~~~~~~~~~~~~~~---Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l-----~~~~vi~~H~~~~~~~ 233 (264)
T 3rpc_A 162 TVYLVGDTVWTSDVEKALLRFDP---NVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRK-----PEAKIIAVHMDTVNHT 233 (264)
T ss_dssp CEEECCSCCSCHHHHHHHHHHCC---SEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHC-----TTSEEEEESCSSSTTB
T ss_pred EEEEECCcCchHHHHHHHHHhCC---CEEEEecCccccccccCCcccCHHHHHHHHHhC-----CcCeEEEEcccccccc
Confidence 44444444 33 23344444555 66777776 35789988888777553 2667888877654434
Q ss_pred ccChHHHHHHHHHcCc
Q psy12303 240 FDPIEEIADICQKYNM 255 (480)
Q Consensus 240 ~~~l~~I~~i~~~~~~ 255 (480)
-.+.+++.+.+++.|+
T Consensus 234 ~~~~~~l~~~~~~~g~ 249 (264)
T 3rpc_A 234 ATSRKDVRKFIKGNNI 249 (264)
T ss_dssp CSCHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHcCC
Confidence 4678899999988765
No 302
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=34.07 E-value=17 Score=35.26 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=19.0
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
...|+.++++++++-|+++|+.|++|.+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34556666777777777777777777654
No 303
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=33.65 E-value=28 Score=31.58 Aligned_cols=60 Identities=15% Similarity=0.027 Sum_probs=35.9
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~---~~~l~v 259 (480)
|.+++ .+|.+.+++.++...+.|..-.++..+.|..++=+.+.-.++.+.+.+. ++++++
T Consensus 14 Pf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 14 PFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp CEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44567 8999999999988877775543444333333333334445566665553 456665
No 304
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=33.63 E-value=19 Score=34.86 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=22.7
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
....|..++++++++.|+++|+.+++|.+.
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 345566777888888888888888888754
No 305
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=33.49 E-value=41 Score=30.25 Aligned_cols=74 Identities=11% Similarity=0.011 Sum_probs=48.2
Q ss_pred CchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCc
Q psy12303 177 CHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNM 255 (480)
Q Consensus 177 ~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~ 255 (480)
.|.++...++.+|+ +.+.+. +.++....+.+|.+.++..++++ +.+|+.....++ ...+.|.++|++.|+
T Consensus 169 ~H~af~Y~~~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~if~e~~~~~----~~~~~l~~~a~~~g~ 239 (282)
T 3mfq_A 169 PHDAFNYFAASYDF---TLYAPQGVSTDSEVANSDMIETVNLIIDHN--IKAIFTESTTNP----ERMKKLQEAVKAKGG 239 (282)
T ss_dssp SSSCCHHHHHHTTC---EEECSSCSSSCSCCCHHHHHHHHHHHHHHT--CCEEECBTTSCT----HHHHHHHHHHHTTSC
T ss_pred ECchHHHHHHHCCC---eEecccccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh----HHHHHHHHHHHhcCC
Confidence 68888899999998 444332 33445677888888777655544 556665433221 126778889999997
Q ss_pred EEEe
Q psy12303 256 WLHV 259 (480)
Q Consensus 256 ~l~v 259 (480)
.+.+
T Consensus 240 ~v~~ 243 (282)
T 3mfq_A 240 QVEV 243 (282)
T ss_dssp CCEE
T ss_pred ceEE
Confidence 6543
No 306
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=33.42 E-value=1.6e+02 Score=22.40 Aligned_cols=48 Identities=13% Similarity=0.188 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHCC-----CccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 207 IPSELERLVLERKAKG-----DIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~-----~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
|++++.+.|++..++. ..|..|-++.-. ...++.+|.++++++|+.++
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 8888888887765443 224444333322 23579999999999998663
No 307
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=33.32 E-value=2.6e+02 Score=24.84 Aligned_cols=67 Identities=18% Similarity=0.079 Sum_probs=36.8
Q ss_pred EEEecCCCchhHHHHHHHcC-CCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCG-LGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g-~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.... .........+. .+..++..+..|- -|.+++++.+++..++-.++-.++-+++....+.+
T Consensus 68 V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 135 (293)
T 3rih_A 68 VAVAARSP-RELSSVTAELGELGAGNVIGVRLDV---SDPGSCADAARTVVDAFGALDVVCANAGIFPEARL 135 (293)
T ss_dssp EEEEESSG-GGGHHHHHHHTTSSSSCEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred EEEEECCH-HHHHHHHHHHHhhCCCcEEEEEEeC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 55554433 33444444332 2223677777763 37788888777654332235677777776555544
No 308
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=32.96 E-value=1.5e+02 Score=26.92 Aligned_cols=76 Identities=11% Similarity=0.098 Sum_probs=48.2
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEee-CCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHH
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVP-SDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIAD 248 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~-~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~ 248 (480)
.+++ .|.++...++.+|+ +.+.+. ..++....+.+|.+.++..++++ +++|+.....++ ...+.|++
T Consensus 199 ~~v~---~H~af~Yfa~~yGl---~~~~~~~~~~~~eps~~~l~~l~~~ik~~~--v~~If~e~~~~~----~~~~~la~ 266 (313)
T 1toa_A 199 VLVT---AHDAFGYFSRAYGF---EVKGLQGVSTASEASAHDMQELAAFIAQRK--LPAIFIESSIPH----KNVEALRD 266 (313)
T ss_dssp EEEE---EESCCHHHHHHHTC---EEEEEECSSCSSCCCHHHHHHHHHHHHHTT--CSEEEEETTSCT----HHHHHHHH
T ss_pred EEEE---ECCcHHHHHHHCCC---eEEEeeccCCCCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCCh----HHHHHHHc
Confidence 4555 58888899999999 444443 34456778888888888776665 446666544322 11344543
Q ss_pred H--HHHcCcEE
Q psy12303 249 I--CQKYNMWL 257 (480)
Q Consensus 249 i--~~~~~~~l 257 (480)
. |++.|+.+
T Consensus 267 ~~~A~e~gv~v 277 (313)
T 1toa_A 267 AVQARGHVVQI 277 (313)
T ss_dssp HHHTTTCCCEE
T ss_pred cchhhhcCCce
Confidence 3 37888775
No 309
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=32.81 E-value=2.3e+02 Score=24.74 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.++.+++++.++...++=.....|.=-.|+-.|..-..++.+.+.++++|++++=
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm~~l~~~gL~fvD 133 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIID 133 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCCEEEc
Confidence 5788999999987765433333333223444444445688999999999966543
No 310
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=32.79 E-value=19 Score=34.34 Aligned_cols=31 Identities=6% Similarity=0.026 Sum_probs=25.1
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
...|+.++++++++-|+++|+.|++|.+..-
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH 93 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVINH 93 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 4567788889999999999999999986543
No 311
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=32.58 E-value=1.9e+02 Score=25.05 Aligned_cols=43 Identities=9% Similarity=0.044 Sum_probs=26.7
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..++-.++-.++-+++....+.
T Consensus 55 ~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (258)
T 3oid_A 55 KVLVVKANV---GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP 97 (258)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred cEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 667777663 3778888887765443223567777777544443
No 312
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=32.33 E-value=18 Score=35.35 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=25.5
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.+...|+.++++++++-|+++|+.|++|.+..
T Consensus 90 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 90 LNENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34556778888999999999999999998654
No 313
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=32.18 E-value=2.1e+02 Score=25.01 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=34.2
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.. ........+..++. ++..+..|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 54 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 117 (266)
T 3grp_A 54 VGLHGT-REDKLKEIAADLGK---DVFVFSANL---SDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLF 117 (266)
T ss_dssp EEEEES-CHHHHHHHHHHHCS---SEEEEECCT---TSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----
T ss_pred EEEEeC-CHHHHHHHHHHhCC---ceEEEEeec---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 444433 33344455555554 667777663 37788888777654332235677777776555444
No 314
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=32.14 E-value=2.5e+02 Score=24.26 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=32.3
Q ss_pred EEEecCCCchhHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCC
Q psy12303 170 VMFTSDQCHYSVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTT 235 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~ 235 (480)
++++..............+ ..+. ++..+..|- -|.+++++.+++..++-.++-.++.+++..
T Consensus 35 V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 35 VVLTYNGAAEGAATAVAEIEKLGR-SALAIKADL---TNAAEVEAAISAAADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCT---TCHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCC---CCHHHHHHHHHHHHHHhCCCCEEEECCCcc
Confidence 5555343333333333332 2222 566666663 377888888776544322356677666543
No 315
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=31.75 E-value=2.6e+02 Score=24.86 Aligned_cols=84 Identities=17% Similarity=0.073 Sum_probs=51.6
Q ss_pred CCchhHHHHHHHcCCCCCCeEEeeCCCCCC-CCHHHHHHHHHHHHHCCCccEEEEeccCC-Cccc---cccChHHHHHHH
Q psy12303 176 QCHYSVRSCAAVCGLGTDNCVEVPSDKRGR-LIPSELERLVLERKAKGDIPFFVNCTSGT-TVLG---AFDPIEEIADIC 250 (480)
Q Consensus 176 ~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~-~~~G---~~~~l~~I~~i~ 250 (480)
..+..+.+.+...|. .| -+ ++|. .++++++.+++.....|..- ++++.-|+ +..+ ...++..|..+.
T Consensus 132 ~~n~~ll~~~a~~~k---PV-~l---k~G~~~t~~ei~~Ave~i~~~Gn~~-i~L~~Rg~~~yp~y~~~~vdl~~i~~lk 203 (276)
T 1vs1_A 132 MQNFPLLREVGRSGK---PV-LL---KRGFGNTVEELLAAAEYILLEGNWQ-VVLVERGIRTFEPSTRFTLDVAAVAVLK 203 (276)
T ss_dssp TTCHHHHHHHHHHTC---CE-EE---ECCTTCCHHHHHHHHHHHHHTTCCC-EEEEECCBCCSCCSSSSBCBHHHHHHHH
T ss_pred ccCHHHHHHHHccCC---eE-EE---cCCCCCCHHHHHHHHHHHHHcCCCe-EEEEeCCcCCCCCcCcchhCHHHHHHHH
Confidence 344445555544554 33 23 3344 48999999998877766432 33332132 2212 224678888877
Q ss_pred HHcCcEEEeeccccccc
Q psy12303 251 QKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 251 ~~~~~~l~vD~a~~~~~ 267 (480)
+..++++++|..|+.+.
T Consensus 204 ~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 204 EATHLPVIVDPSHPAGR 220 (276)
T ss_dssp HHBSSCEEECCHHHHCS
T ss_pred HHhCCCEEEeCCCCCCc
Confidence 77799999999999764
No 316
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=31.40 E-value=1.5e+02 Score=25.88 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=27.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 69 ~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 112 (270)
T 3is3_A 69 DAIAIKADI---RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112 (270)
T ss_dssp CEEEEECCT---TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred cEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 667777663 37788888777654332235677777775555544
No 317
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=31.31 E-value=25 Score=31.74 Aligned_cols=54 Identities=24% Similarity=0.205 Sum_probs=32.2
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHc
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKY 253 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~ 253 (480)
|.+ ++.+|.+.+++.++...++|..-.++..+.|..++=+.+.-.++.+.+.+.
T Consensus 10 Pf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 10 TFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp CEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 446 789999999999988887775433333333332222333445566665554
No 318
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=31.03 E-value=2.2e+02 Score=26.35 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=43.6
Q ss_pred CCC-CCHHHHHHHHHHHHHCCCccEEEEeccCC----CccccccChHHHHHHHHHcCcEEEeeccccccc
Q psy12303 203 RGR-LIPSELERLVLERKAKGDIPFFVNCTSGT----TVLGAFDPIEEIADICQKYNMWLHVDAAWGGGL 267 (480)
Q Consensus 203 ~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~----~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~~ 267 (480)
+|. .++++++.+++.....|.. .++++..|+ +++=...++..|..+.+..++++++|..|+.+.
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~-~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNT-KIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCC-CEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCC-eEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 344 4899999999887776643 234442333 122233568888888888799999999999764
No 319
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.02 E-value=21 Score=35.54 Aligned_cols=29 Identities=10% Similarity=0.234 Sum_probs=20.8
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
...|+.++++++++-|+++|+.|++|.++
T Consensus 74 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 74 PQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34566677777777777777777777755
No 320
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=30.95 E-value=61 Score=27.59 Aligned_cols=84 Identities=11% Similarity=0.064 Sum_probs=44.4
Q ss_pred ecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCH-HHHHHHHHHHHHCCCccEEEEeccCCC---cc----ccccChH
Q psy12303 173 TSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIP-SELERLVLERKAKGDIPFFVNCTSGTT---VL----GAFDPIE 244 (480)
Q Consensus 173 ~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~-~~L~~~i~~~~~~~~~~~~v~~~~~~~---~~----G~~~~l~ 244 (480)
+...+-.....+++. .+ .++--|-+.....|. ..+.++..+. | + ++=++..+- +. |++.+..
T Consensus 81 v~~~~~~~n~~a~~~-~v---DII~Hp~~~~~~~~~~~~~a~~A~e~---g--v-~lEIn~s~~~~~~~~~R~~~~~~~~ 150 (212)
T 1v77_A 81 VESNDLRVIRYSIEK-GV---DAIISPWVNRKDPGIDHVLAKLMVKK---N--V-ALGFSLRPLLYSNPYERANLLRFMM 150 (212)
T ss_dssp EECSCHHHHHHHHHT-TC---SEEECTTTTSSSCSCCHHHHHHHHHH---T--C-EEEEESHHHHHSCHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHhC-CC---CEEecccccccCCCCCHHHHHHHHHC---C--e-EEEEECcHHhcCCcchHHHHHHHHH
Confidence 333343445566666 55 555555544333333 2333333333 1 3 343333221 12 2356778
Q ss_pred HHHHHHHHcCcEEEeec-ccccc
Q psy12303 245 EIADICQKYNMWLHVDA-AWGGG 266 (480)
Q Consensus 245 ~I~~i~~~~~~~l~vD~-a~~~~ 266 (480)
++.++|+++|+++++.- ||...
T Consensus 151 ~il~l~k~~g~~ivisSDAh~~~ 173 (212)
T 1v77_A 151 KAWKLVEKYKVRRFLTSSAQEKW 173 (212)
T ss_dssp HHHHHHHHHTCCEEEECCCSSGG
T ss_pred HHHHHHHhcCCCEEEeCCCCChh
Confidence 99999999999887763 44443
No 321
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=30.86 E-value=27 Score=24.80 Aligned_cols=19 Identities=16% Similarity=0.244 Sum_probs=17.4
Q ss_pred hHHHHHHHHHcCcEEEeec
Q psy12303 243 IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~ 261 (480)
-.+|.++|+++|++++-|-
T Consensus 29 A~~I~~~A~e~~VPi~e~~ 47 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDI 47 (83)
T ss_dssp HHHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHHcCCCEEeCH
Confidence 4889999999999999986
No 322
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=30.18 E-value=21 Score=34.37 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=18.0
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
...|+.++++++++-|+++|+.|++|.++
T Consensus 76 p~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 76 PNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555566666666666666666666644
No 323
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=30.10 E-value=24 Score=32.10 Aligned_cols=23 Identities=22% Similarity=0.143 Sum_probs=17.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCc
Q psy12303 202 KRGRLIPSELERLVLERKAKGDI 224 (480)
Q Consensus 202 ~~~~~d~~~L~~~i~~~~~~~~~ 224 (480)
+++.+|.+.+++.++...+.|..
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~ 36 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQIKHGAH 36 (297)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCS
T ss_pred CCCCcCHHHHHHHHHHHHHcCCC
Confidence 56788888888888877777644
No 324
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=30.07 E-value=54 Score=29.60 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHHHCCCccEEE-EeccCC---------------CccccccChHHHHHHHHHcCcEEEeec
Q psy12303 207 IPSELERLVLERKAKGDIPFFV-NCTSGT---------------TVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v-~~~~~~---------------~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
+.+.+++.|+.-++.|..+.=| +...+. ........++++.++|+++|+.+++|-
T Consensus 40 ~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 40 NKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 5566777777666666553222 211111 011223447999999999999998875
No 325
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.92 E-value=2.3e+02 Score=24.20 Aligned_cols=44 Identities=11% Similarity=-0.131 Sum_probs=28.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..+.-.++-+++.+++....+.+
T Consensus 64 ~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 107 (256)
T 3ezl_A 64 DFYASEGNV---GDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVF 107 (256)
T ss_dssp CCEEEECCT---TCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCT
T ss_pred eeEEEecCC---CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence 556666652 37788888887665443446777877776555543
No 326
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=29.85 E-value=21 Score=35.03 Aligned_cols=29 Identities=7% Similarity=0.247 Sum_probs=19.8
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
...|+.++++++++-|+++|+.|++|.+.
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34566666777777777777777777654
No 327
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=29.69 E-value=19 Score=35.23 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=27.5
Q ss_pred cCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 232 SGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 232 ~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
......|+.++++++++-|+++|+.|++|.+.-
T Consensus 66 ~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 66 IINTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp CSEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 344567888999999999999999999998653
No 328
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.41 E-value=2e+02 Score=24.54 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=26.4
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..++.|- -|.+++++.+++..++-.++-.++-+++....+.+
T Consensus 55 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (246)
T 3osu_A 55 DSFAIQANV---ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL 98 (246)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred cEEEEEccC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 566666653 37777877777654332235677777776554443
No 329
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=29.22 E-value=2.1e+02 Score=25.18 Aligned_cols=55 Identities=13% Similarity=-0.143 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
.++.+++++.++...++=.....|.=-.|+-.|..-..++.+.+.++++|++|+=
T Consensus 106 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~FlD 160 (261)
T 2qv5_A 106 GDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLD 160 (261)
T ss_dssp TSCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCCEEEc
Confidence 3789999999998766533322332223333344445689999999999977643
No 330
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=29.16 E-value=21 Score=34.86 Aligned_cols=25 Identities=12% Similarity=0.376 Sum_probs=12.2
Q ss_pred cccccChHHHHHHHHHcCcEEEeec
Q psy12303 237 LGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 237 ~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
.|+.++++++++-|+++|+.|++|.
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3444444555555555555555554
No 331
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.98 E-value=1.7e+02 Score=25.55 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=27.7
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..+.-.++-+++-+++....+.+
T Consensus 78 ~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 121 (267)
T 3u5t_A 78 KALTAQADV---SDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI 121 (267)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred eEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 667777663 37788888877654432346677777776554443
No 332
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=28.85 E-value=2.5e+02 Score=24.31 Aligned_cols=44 Identities=16% Similarity=-0.065 Sum_probs=26.6
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+.+++.+++..+.-.++-.++.+++....+.+
T Consensus 76 ~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 119 (269)
T 3gk3_A 76 DFKAYAVDV---ADFESCERCAEKVLADFGKVDVLINNAGITRDATF 119 (269)
T ss_dssp CCEEEECCT---TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCT
T ss_pred ceEEEEecC---CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcch
Confidence 566666653 37778887777654332235577777776554443
No 333
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.84 E-value=2.2e+02 Score=24.97 Aligned_cols=64 Identities=17% Similarity=0.073 Sum_probs=36.8
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.. ...........++. ++..++.|- -|.+++++.+++..+.-.++-+++-+++....+.+
T Consensus 54 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 54 VVVADV-NEDAAVRVANEIGS---KAFGVRVDV---SSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp EEEEES-SHHHHHHHHHHHCT---TEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred EEEEeC-CHHHHHHHHHHhCC---ceEEEEecC---CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 555543 33344444454554 566677663 37788888877654332235677777776555544
No 334
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=28.70 E-value=1.8e+02 Score=25.39 Aligned_cols=43 Identities=19% Similarity=0.023 Sum_probs=26.5
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..++-.++-+++-+++....+.
T Consensus 79 ~~~~~~~D~---~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 121 (269)
T 4dmm_A 79 EAFAVKADV---SQESEVEALFAAVIERWGRLDVLVNNAGITRDTL 121 (269)
T ss_dssp CEEEEECCT---TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred cEEEEECCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 667777663 3778888877765433223567777777555443
No 335
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.59 E-value=2.2e+02 Score=24.84 Aligned_cols=43 Identities=14% Similarity=0.014 Sum_probs=27.7
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..++..++-+++-+++....+.
T Consensus 76 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 118 (271)
T 4ibo_A 76 DAEAVAFDV---TSESEIIEAFARLDEQGIDVDILVNNAGIQFRKP 118 (271)
T ss_dssp CEEECCCCT---TCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCC
T ss_pred ceEEEEcCC---CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence 666776663 3788888888776554444667777777554443
No 336
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=28.57 E-value=2.1e+02 Score=26.19 Aligned_cols=31 Identities=10% Similarity=0.124 Sum_probs=21.0
Q ss_pred ceEEEecCCCc-----------hhHHHHHHHcCCCCCCeEEeeCC
Q psy12303 168 QLVMFTSDQCH-----------YSVRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 168 ~~~vl~~~~~h-----------~s~~~~~~~~g~~~~~v~~v~~~ 201 (480)
+.+|+++...- ......++.+|. +|+.++.+
T Consensus 94 ~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA---~v~~~~~~ 135 (341)
T 1f2d_A 94 KCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGA---DVRVIEDG 135 (341)
T ss_dssp EEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTC---EEEECCCC
T ss_pred ceEEEeccCCCccccccccccccccHHHHHhCCC---EEEEeCCc
Confidence 55777776543 226677888888 88877754
No 337
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=28.57 E-value=2e+02 Score=24.66 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=36.0
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++. .........+..++. ++..+..|- -|.+++++.+++..+.-.++-.++-+++....+.+
T Consensus 33 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 33 VIVSD-INAEGAKAAAASIGK---KARAIAADI---SDPGSVKALFAEIQALTGGIDILVNNASIVPFVAW 96 (247)
T ss_dssp EEEEC-SCHHHHHHHHHHHCT---TEEECCCCT---TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---ceEEEEcCC---CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 44443 333444555555554 667776663 37778887777654332235567777776555443
No 338
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=28.56 E-value=21 Score=35.02 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=25.4
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+....|+.++++++++.|+++|+.|++|.+..
T Consensus 90 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 90 VNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 44556777888888888899999999998654
No 339
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=28.53 E-value=1.7e+02 Score=25.59 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=26.9
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..+.-.++-+++-+++....+.
T Consensus 82 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 124 (271)
T 3v2g_A 82 RAVAIRADN---RDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP 124 (271)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred cEEEEECCC---CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence 667777763 3788888888765443223567777777554443
No 340
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=28.12 E-value=2.6e+02 Score=23.32 Aligned_cols=102 Identities=20% Similarity=0.219 Sum_probs=59.8
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHc-CCCCCCeEEeeCCC------C
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVC-GLGTDNCVEVPSDK------R 203 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~-g~~~~~v~~v~~~~------~ 203 (480)
-.+|-..|.+-....+..+.++ .++.|+ +.+|+.| ..-.+-.++.+.+ |+ +++.|.... .
T Consensus 17 ~~YF~~~G~eNT~~tl~la~er----a~e~~I-----k~iVVAS-~sG~TA~k~~e~~~~i---~lVvVTh~~GF~~pg~ 83 (201)
T 1vp8_A 17 IVYFNKPGRENTEETLRLAVER----AKELGI-----KHLVVAS-SYGDTAMKALEMAEGL---EVVVVTYHTGFVREGE 83 (201)
T ss_dssp CEEESSCSGGGHHHHHHHHHHH----HHHHTC-----CEEEEEC-SSSHHHHHHHHHCTTC---EEEEEECCTTSSSTTC
T ss_pred EEEecCCCcccHHHHHHHHHHH----HHHcCC-----CEEEEEe-CCChHHHHHHHHhcCC---eEEEEeCcCCCCCCCC
Confidence 3556666666555566666655 234455 4244444 4666667777766 33 777776542 2
Q ss_pred CCCCHHHHHHHHHHHHHCCCccEEEEeccCCC--------ccccccChHHHHHHHH
Q psy12303 204 GRLIPSELERLVLERKAKGDIPFFVNCTSGTT--------VLGAFDPIEEIADICQ 251 (480)
Q Consensus 204 ~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~--------~~G~~~~l~~I~~i~~ 251 (480)
..|+++ .++.|++. | .+.+..++.-. -.|-+.|.+-|++..|
T Consensus 84 ~e~~~e-~~~~L~~~---G--~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 84 NTMPPE-VEEELRKR---G--AKIVRQSHILSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp CSSCHH-HHHHHHHT---T--CEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CcCCHH-HHHHHHhC---C--CEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 355654 44445443 3 66777777733 3445678888888887
No 341
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=27.93 E-value=2.8e+02 Score=23.85 Aligned_cols=66 Identities=8% Similarity=0.008 Sum_probs=35.0
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++++.. .-.........+.....++..+..|- -|.+++++.+++..++-.++-.++-+++....+.
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 98 (257)
T 3imf_A 33 VVITGR-TKEKLEEAKLEIEQFPGQILTVQMDV---RNTDDIQKMIEQIDEKFGRIDILINNAAGNFICP 98 (257)
T ss_dssp EEEEES-CHHHHHHHHHHHCCSTTCEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 555543 33334444444432223677777663 3777888877765433223556777676544443
No 342
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=27.51 E-value=25 Score=35.58 Aligned_cols=30 Identities=17% Similarity=0.453 Sum_probs=20.4
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|+.++++++++-|+++|+.|++|.++.
T Consensus 217 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 217 PHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 344556667777777777777777777554
No 343
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.43 E-value=2.8e+02 Score=23.79 Aligned_cols=43 Identities=14% Similarity=-0.015 Sum_probs=27.9
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..++.|- -|.+++++.+++..+. .++-+++-+++....+.+
T Consensus 57 ~~~~~~~Dv---~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 57 RIVARSLDA---RNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECCT---TCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred eEEEEECcC---CCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence 666777663 3778888888765554 346777777776554433
No 344
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=27.29 E-value=2.5e+02 Score=23.80 Aligned_cols=44 Identities=11% Similarity=-0.040 Sum_probs=29.4
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..+...++-.|+.+++....+.+
T Consensus 55 ~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 98 (247)
T 3lyl_A 55 KARGLVLNI---SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLM 98 (247)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCG
T ss_pred ceEEEEecC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence 666777663 37888888888766554456677777776554443
No 345
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=26.97 E-value=22 Score=34.91 Aligned_cols=15 Identities=7% Similarity=0.171 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHCC
Q psy12303 208 PSELERLVLERKAKG 222 (480)
Q Consensus 208 ~~~L~~~i~~~~~~~ 222 (480)
.+++++.+++..++|
T Consensus 102 ~~df~~Lv~~aH~~G 116 (488)
T 2wc7_A 102 NEAFKELLDAAHQRN 116 (488)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCC
Confidence 355555555555554
No 346
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=26.93 E-value=93 Score=24.46 Aligned_cols=50 Identities=12% Similarity=0.008 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
..+...+.+++..+.|.+ .+++..+ . .-+++.++|+++|+.++-+.|.+.
T Consensus 86 p~~~~~~vv~~~~~~gi~--~i~~~~g-----~--~~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 86 KPKLTMEYVEQAIKKGAK--VVWFQYN-----T--YNREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEECTT-----C--CCHHHHHHHHHTTCEEEESCCHHH
T ss_pred CHHHHHHHHHHHHHcCCC--EEEECCC-----c--hHHHHHHHHHHcCCEEEcCCchhh
Confidence 345666666666555543 4455433 2 258999999999999887877654
No 347
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=26.70 E-value=39 Score=26.60 Aligned_cols=49 Identities=20% Similarity=0.047 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 208 PSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 208 ~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
.+...+.+++..+.|.+ .++++.+.. -+++.++|+++|+.++-+.|.+.
T Consensus 80 ~~~~~~v~~~~~~~gi~--~i~~~~g~~-------~~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 80 PSALMDHLPEVLALRPG--LVWLQSGIR-------HPEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp HHHHTTTHHHHHHHCCS--CEEECTTCC-------CHHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHHHHHHHHcCCC--EEEEcCCcC-------HHHHHHHHHHcCCEEEcCCccce
Confidence 34555555555555543 445544421 38999999999999998887664
No 348
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=26.59 E-value=31 Score=34.89 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=26.5
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
....|..++++++++-|+++|+.|++|.+..
T Consensus 202 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 232 (599)
T 3bc9_A 202 RTKYGTKGELENAIDALHNNDIKVYFDAVLN 232 (599)
T ss_dssp SBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 4557888899999999999999999998654
No 349
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.37 E-value=25 Score=35.33 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=10.8
Q ss_pred CHHHHHHHHHHHHHCCCc
Q psy12303 207 IPSELERLVLERKAKGDI 224 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~ 224 (480)
+.+++++.+++..++|.+
T Consensus 91 t~~df~~lv~~aH~~Gi~ 108 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMR 108 (570)
T ss_dssp CHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHCCCE
Confidence 456666666666666543
No 350
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=26.26 E-value=27 Score=35.22 Aligned_cols=31 Identities=19% Similarity=0.542 Sum_probs=23.1
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+...|+.++++++++-|+++|+.|++|.++.
T Consensus 212 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 212 DPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 3445566678888888888888888888654
No 351
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=25.98 E-value=81 Score=23.60 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=27.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCeEECCChhH
Q psy12303 108 PVFILMETVVLEKMRQIIGWQGGDSILAPGGSI 140 (480)
Q Consensus 108 ~~~~~~e~~~~~~la~~~g~~~~~~~~t~ggt~ 140 (480)
|.-..--+++.++|++.||.+..++.+..|.|.
T Consensus 46 P~dGkAN~ali~~LAk~l~V~ks~V~Iv~G~tS 78 (108)
T 1n91_A 46 PVDGQANSHLVKFLGKQFRVAKSQVVIEKGELG 78 (108)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCTTTEEESSCTTS
T ss_pred CCCChHHHHHHHHHHHHhCCccceEEEEecCCC
Confidence 333466678999999999999999999999874
No 352
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=25.97 E-value=2.3e+02 Score=24.82 Aligned_cols=64 Identities=13% Similarity=-0.022 Sum_probs=35.9
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.. ........+..++. .+..++.|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 56 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 56 VLCADI-DGDAADAAATKIGC---GAAACRVDV---SDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp EEEEES-SHHHHHHHHHHHCS---SCEEEECCT---TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred EEEEeC-CHHHHHHHHHHcCC---cceEEEecC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 454443 33344555555554 556666653 37788888777654332235677777776554444
No 353
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=25.95 E-value=27 Score=34.94 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=9.7
Q ss_pred CHHHHHHHHHHHHHCCC
Q psy12303 207 IPSELERLVLERKAKGD 223 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~ 223 (480)
+.+++++.+++..++|.
T Consensus 78 t~~df~~Lv~~aH~~Gi 94 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGM 94 (557)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCC
Confidence 35566666666555553
No 354
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=25.94 E-value=3.1e+02 Score=23.61 Aligned_cols=44 Identities=11% Similarity=-0.036 Sum_probs=25.9
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 61 ~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 104 (262)
T 3pk0_A 61 KVIGVQTDV---SDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPL 104 (262)
T ss_dssp CEEEEECCT---TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCT
T ss_pred cEEEEEcCC---CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 666776663 36777777776544332235567776765544443
No 355
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=25.94 E-value=25 Score=35.53 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=19.3
Q ss_pred ccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 236 VLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 236 ~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
..|+.++++++++-|+++|+.|++|.++.
T Consensus 215 ~~Gt~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 215 QFGDLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 34555667777777777777777776543
No 356
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=25.74 E-value=2.3e+02 Score=24.51 Aligned_cols=43 Identities=14% Similarity=-0.011 Sum_probs=25.7
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..+....+-.|+.+++....+.
T Consensus 77 ~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~ 119 (267)
T 4iiu_A 77 NGRLLSFDV---ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAA 119 (267)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCC
T ss_pred ceEEEEecC---CCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCc
Confidence 566676653 3778888877765433223556777666554443
No 357
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.58 E-value=21 Score=34.29 Aligned_cols=27 Identities=26% Similarity=0.426 Sum_probs=14.8
Q ss_pred cccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 237 LGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 237 ~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.|..++++++++-|+++|+.+++|.+.
T Consensus 71 ~G~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 71 LGTEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp TEEHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 455555555555555555555555543
No 358
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.52 E-value=2.3e+02 Score=24.65 Aligned_cols=44 Identities=7% Similarity=-0.060 Sum_probs=27.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..++.|- -|.+++++.+++..+...++-.++.+++....+.+
T Consensus 80 ~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 123 (271)
T 4iin_A 80 KAAVIKFDA---ASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLA 123 (271)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCG
T ss_pred ceEEEECCC---CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCccc
Confidence 666777663 37777887777654432335677777776554443
No 359
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=25.46 E-value=36 Score=24.98 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=17.7
Q ss_pred hHHHHHHHHHcCcEEEeecc
Q psy12303 243 IEEIADICQKYNMWLHVDAA 262 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~a 262 (480)
-.+|.++|+++|++++-|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 48899999999999999863
No 360
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=25.13 E-value=67 Score=24.64 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeec
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~ 261 (480)
.+++++++..+++. |-+|++ |+-..+.+.+-+++.+..+++|+-+.+--
T Consensus 48 ~l~~~~l~~ll~~~------~evlii--GtG~~~~~~~~~~~~~~l~~~gI~ve~m~ 96 (122)
T 2ab1_A 48 GVQPADVKEVVEKG------VQTLVI--GRGMSEALKVPSSTVEYLKKHGIDVRVLQ 96 (122)
T ss_dssp CCCHHHHHHHHTTC------CSEEEE--EECSSCCSCCCHHHHHHHHHTTCEEEEEC
T ss_pred HCCHHHHHHHhhCC------CCEEEE--CCCCCCccCCCHHHHHHHHHcCCEEEEeC
Confidence 47889999888754 666776 43345555456888999999998776654
No 361
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=24.97 E-value=1.4e+02 Score=27.08 Aligned_cols=31 Identities=3% Similarity=-0.010 Sum_probs=23.0
Q ss_pred ceEEEecCCC-chhHHHHHHHcCCCCCCeEEeeCC
Q psy12303 168 QLVMFTSDQC-HYSVRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 168 ~~~vl~~~~~-h~s~~~~~~~~g~~~~~v~~v~~~ 201 (480)
+.+|++++.. -..-...++.+|. +|+.++.+
T Consensus 97 ~~~iv~p~~~~~~~k~~~~~~~GA---~v~~~~~~ 128 (325)
T 1j0a_A 97 DAILVLRGKEELKGNYLLDKIMGI---ETRVYDAK 128 (325)
T ss_dssp EEEEEEESCCCSCHHHHHHHHTTC---EEEEESCC
T ss_pred cEEEEECCCCCCCchHHHHHHCCC---EEEEeCcc
Confidence 5578888766 5566777888888 88887754
No 362
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=24.95 E-value=30 Score=34.68 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=9.8
Q ss_pred CHHHHHHHHHHHHHCCCc
Q psy12303 207 IPSELERLVLERKAKGDI 224 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~ 224 (480)
+.+++++.+++..++|.+
T Consensus 77 t~~df~~lv~~~h~~Gi~ 94 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMK 94 (558)
T ss_dssp CHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHCCCE
Confidence 345566666655555543
No 363
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=24.79 E-value=32 Score=34.89 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=22.4
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|+.++++++++-|+++|+.|++|.+..
T Consensus 193 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 193 PRYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 345666778888888888888888887653
No 364
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.62 E-value=3e+02 Score=23.68 Aligned_cols=64 Identities=13% Similarity=-0.003 Sum_probs=36.2
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.. ...........++. .+..++.|- -|.+++++.+++..++-..+-.++-+++....+.+
T Consensus 35 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 35 VAIADI-DIERARQAAAEIGP---AAYAVQMDV---TRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp EEEEES-CHHHHHHHHHHHCT---TEEEEECCT---TCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred EEEEeC-CHHHHHHHHHHhCC---CceEEEeeC---CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 444443 33344445555543 556666652 37788888887655443346677777775544433
No 365
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.51 E-value=70 Score=24.94 Aligned_cols=29 Identities=7% Similarity=0.107 Sum_probs=23.0
Q ss_pred cEEEEeccCCCccccccChHHHHHHHHHcCcEEEe
Q psy12303 225 PFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHV 259 (480)
Q Consensus 225 ~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~v 259 (480)
+.+|++|.+ ..|-+++.++|+++|++++.
T Consensus 75 ~~~iIlt~g------~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 75 VRCLILTGN------LEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEEEETT------CCCCHHHHHHHHHHTCCEEE
T ss_pred CcEEEEcCC------CCCCHHHHHHHHHCCCeEEE
Confidence 788888655 44678899999999988764
No 366
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=24.47 E-value=35 Score=34.77 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=24.2
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+....|+.++++++++-|+++|+.|++|.+..
T Consensus 155 vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~N 186 (628)
T 1g5a_A 155 VNPALGTIGDLREVIAALHEAGISAVVDFIFN 186 (628)
T ss_dssp BCTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 34455677778888888888888888887653
No 367
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.18 E-value=2.3e+02 Score=24.85 Aligned_cols=67 Identities=10% Similarity=-0.071 Sum_probs=35.5
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++.. ...........+.....++..+..|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 51 V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 117 (279)
T 3sju_A 51 VYGCAR-DAKNVSAAVDGLRAAGHDVDGSSCDV---TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET 117 (279)
T ss_dssp EEEEES-CHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCG
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 555543 33333444333321122667777663 37788888777654332235677777776554444
No 368
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=24.11 E-value=29 Score=35.48 Aligned_cols=32 Identities=9% Similarity=0.219 Sum_probs=26.3
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
++...|+.++++++++-|+++||.|++|.+..
T Consensus 278 idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 278 VARRLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp ECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 34456677789999999999999999998754
No 369
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.00 E-value=33 Score=35.41 Aligned_cols=31 Identities=10% Similarity=0.183 Sum_probs=23.7
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
....|+.++++++++-|+++|+.|++|.+..
T Consensus 101 dp~~Gt~~df~~Lv~~aH~~GikVilD~V~N 131 (686)
T 1qho_A 101 EEHFGNWTTFDTLVNDAHQNGIKVIVDFVPN 131 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 3456777788888888888888888887553
No 370
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=23.91 E-value=33 Score=35.39 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=23.0
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
....|+.++++++++-|+++|+.|++|.+..
T Consensus 109 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 139 (686)
T 1d3c_A 109 NPAYGTIADFQNLIAAAHAKNIKVIIDFAPN 139 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCcC
Confidence 3456777778888888888888888887543
No 371
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=23.73 E-value=41 Score=24.75 Aligned_cols=19 Identities=16% Similarity=0.109 Sum_probs=17.3
Q ss_pred hHHHHHHHHHcCcEEEeec
Q psy12303 243 IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~ 261 (480)
-.+|.++|+++|++++-|-
T Consensus 29 A~~I~e~A~e~gVPi~e~~ 47 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDI 47 (98)
T ss_dssp HHHHHHHHHHHTCCEEECH
T ss_pred HHHHHHHHHHcCCCeecCH
Confidence 4889999999999999986
No 372
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=23.58 E-value=31 Score=34.56 Aligned_cols=17 Identities=12% Similarity=-0.199 Sum_probs=9.9
Q ss_pred HHHHHHHHhcCCCCeEEe
Q psy12303 375 AEYMVKKIKSMPDKFYLI 392 (480)
Q Consensus 375 ~~~l~~~l~~~~~g~~~~ 392 (480)
++.+...+-. +||+.++
T Consensus 345 ~k~~~~~l~t-~pG~P~i 361 (555)
T 2ze0_A 345 AKALGALYFF-MQGTPFI 361 (555)
T ss_dssp HHHHHHHHHT-SSSEEEE
T ss_pred HHHHHHHHHh-CCCceEE
Confidence 3444445555 6888765
No 373
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=23.50 E-value=1.5e+02 Score=23.05 Aligned_cols=50 Identities=16% Similarity=-0.026 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
..+...+.+++..+.|.+ .+++..++ . -+++.++|+++|+.++-+.|.+.
T Consensus 78 p~~~v~~v~~~~~~~g~~--~i~~~~~~-----~--~~~l~~~a~~~Gi~~igpnc~g~ 127 (138)
T 1y81_A 78 PPKVGLQVAKEAVEAGFK--KLWFQPGA-----E--SEEIRRFLEKAGVEYSFGRCIMV 127 (138)
T ss_dssp CHHHHHHHHHHHHHTTCC--EEEECTTS-----C--CHHHHHHHHHHTCEEECSCCHHH
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEcCcc-----H--HHHHHHHHHHCCCEEEcCCcceE
Confidence 346667777666665543 44443332 1 48999999999999877676654
No 374
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.44 E-value=44 Score=24.30 Aligned_cols=19 Identities=5% Similarity=-0.043 Sum_probs=17.3
Q ss_pred hHHHHHHHHHcCcEEEeec
Q psy12303 243 IEEIADICQKYNMWLHVDA 261 (480)
Q Consensus 243 l~~I~~i~~~~~~~l~vD~ 261 (480)
-.+|.++|+++|++++-|-
T Consensus 29 A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHHcCCCEEECH
Confidence 4889999999999999986
No 375
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=23.43 E-value=1.7e+02 Score=25.08 Aligned_cols=55 Identities=11% Similarity=0.053 Sum_probs=41.0
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcCcEEE
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYNMWLH 258 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~~~l~ 258 (480)
.+..+|+...+.+++++..+.++... ++.++.++-.+ .+.+++.+.+++.|+.+.
T Consensus 176 Dv~il~~~~~~h~~~~ea~~~~~~l~-----~k~vip~H~~~-----~~~~~~~~~l~~~gi~v~ 230 (235)
T 3kl7_A 176 DIAFLPVNQPYTMTVSQAAKAARMFS-----PKILYPYHYGD-----TKIGELKDALKDSGIDVR 230 (235)
T ss_dssp SEEEEECCTTTSCCHHHHHHHHHHHC-----CSEEEEESCTT-----CCTTHHHHHTTTSCCEEC
T ss_pred CEEEECCCCCcccCHHHHHHHHHHcC-----CCEEEEEcCCC-----CCHHHHHHHHhhCCCEEE
Confidence 77888888778899988888776642 66777777654 577888888877776553
No 376
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=23.41 E-value=2e+02 Score=25.13 Aligned_cols=44 Identities=7% Similarity=-0.068 Sum_probs=26.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
.+..+..|- -|.+++++.+++..+.-.++-+++-+++....+.+
T Consensus 54 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 54 TALAQVLDV---TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL 97 (264)
T ss_dssp EEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 566666652 26777777776654332235677777776554443
No 377
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=23.33 E-value=31 Score=34.93 Aligned_cols=30 Identities=10% Similarity=0.303 Sum_probs=21.6
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|+.++++++++-|+++|+.|++|-++.
T Consensus 187 ~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~N 216 (602)
T 2bhu_A 187 APYGRPEDLMALVDAAHRLGLGVFLDVVYN 216 (602)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 344666677888888888888888887553
No 378
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=23.19 E-value=29 Score=34.58 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=10.5
Q ss_pred CHHHHHHHHHHHHHCCC
Q psy12303 207 IPSELERLVLERKAKGD 223 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~ 223 (480)
+.+++++.+++..++|.
T Consensus 77 t~~df~~lv~~~h~~Gi 93 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGI 93 (543)
T ss_dssp CHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHHCCC
Confidence 45666666666666553
No 379
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=23.17 E-value=34 Score=35.29 Aligned_cols=31 Identities=13% Similarity=0.229 Sum_probs=24.0
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.....|+.++++++++-|+++|+.|++|.+.
T Consensus 104 idp~~Gt~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 104 PNPFFGTLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345677788888888888888888888754
No 380
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=23.10 E-value=1.3e+02 Score=27.53 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=20.4
Q ss_pred ceEEEecCCCchh--------HHHHHHHcCCCCCCeEEeeCC
Q psy12303 168 QLVMFTSDQCHYS--------VRSCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 168 ~~~vl~~~~~h~s--------~~~~~~~~g~~~~~v~~v~~~ 201 (480)
+.+|+++...-.. -...++.+|. +|+.++.+
T Consensus 94 ~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA---~V~~~~~~ 132 (338)
T 1tzj_A 94 KCVLVQENWVNYSDAVYDRVGNIQMSRILGA---DVRLVPDG 132 (338)
T ss_dssp EEEEEEECCSSCCCTTTTTSHHHHHHHHTTC---EEEECCC-
T ss_pred ceEEEecCCCCccccccccCccHHHHHhCCC---EEEEeCCc
Confidence 5577787655322 6677788888 78777643
No 381
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=22.96 E-value=3.4e+02 Score=23.86 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=23.5
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCC
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGT 234 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~ 234 (480)
++..+..|- -|.+++++.+++..++-.++-.++-+++.
T Consensus 98 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 98 KCVLLPGDL---SDEQHCKDIVQETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp CEEEEESCT---TSHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred cEEEEECCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 677777763 37788888777654432235566666554
No 382
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=22.93 E-value=37 Score=34.71 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=22.1
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|+.++++++++-|+++|+.|++|.+..
T Consensus 150 p~~Gt~~df~~Lv~~aH~~GI~VilD~V~N 179 (644)
T 3czg_A 150 PSLGSNDDLVALTSRLREAGISLCADFVLN 179 (644)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 445666778888888888888888887553
No 383
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.91 E-value=3.5e+02 Score=23.62 Aligned_cols=68 Identities=13% Similarity=0.200 Sum_probs=36.9
Q ss_pred EEEecCCCchhHHHHHHHc-CCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVC-GLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~-g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++++....-.........+ ......+..++.|- -|.+++++.+++..++-..+-+++-+++....+.+
T Consensus 52 V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 120 (281)
T 3v2h_A 52 IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM---TKPSEIADMMAMVADRFGGADILVNNAGVQFVEKI 120 (281)
T ss_dssp EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT---TCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCG
T ss_pred EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC---CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 5555442333333333332 22122677777663 37888888887655443335677777776555544
No 384
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=22.90 E-value=36 Score=35.12 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=20.6
Q ss_pred CccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
...|..++++++++-|+++|+.|++|.+.
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 44566677777777777777777777654
No 385
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=22.84 E-value=40 Score=34.76 Aligned_cols=28 Identities=21% Similarity=0.337 Sum_probs=23.6
Q ss_pred cccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 237 LGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 237 ~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
.|+.++++++++-|+++|+.|++|.++.
T Consensus 317 ~Gt~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 317 LGTLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 3555678999999999999999999765
No 386
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=22.77 E-value=34 Score=34.53 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=17.4
Q ss_pred ccccccChHHHHHHHHHcCcEEEeeccc
Q psy12303 236 VLGAFDPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 236 ~~G~~~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
..|+.++++++++.|+++|+.|++|.+.
T Consensus 83 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 83 TYGTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3455555666666666666666666654
No 387
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=22.77 E-value=2.3e+02 Score=24.45 Aligned_cols=61 Identities=15% Similarity=0.042 Sum_probs=32.7
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccC
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSG 233 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 233 (480)
++++....-.........+.....++..+..|- -|.+++++++++..+....+-.|+.+++
T Consensus 34 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 34 VTVTYHSDTTAMETMKETYKDVEERLQFVQADV---TKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCT---TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EEEEcCCChHHHHHHHHHHHhcCCceEEEEecC---CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 555544443333343333322112566777663 3778888888765443223567777666
No 388
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=22.53 E-value=33 Score=34.88 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=23.0
Q ss_pred CCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 234 TTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 234 ~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
+...|+.++++++++-|+++|+.|++|.++.
T Consensus 198 ~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~N 228 (617)
T 1m7x_A 198 TRRFGTRDDFRYFIDAAHAAGLNVILDWVPG 228 (617)
T ss_dssp CGGGSCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3344666778888888888888888887654
No 389
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=22.43 E-value=30 Score=34.66 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=24.1
Q ss_pred CCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 233 GTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 233 ~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
++...|..++++++++-|+++|+.+++|.++.
T Consensus 160 ~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 191 (558)
T 3vgf_A 160 VQNSYGGPEGFRKLVDEAHKKGLGVILDVVYN 191 (558)
T ss_dssp ECGGGTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccccCCHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 34556777778888888888888888887653
No 390
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=22.16 E-value=34 Score=35.41 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEec-----------------cCCCccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCT-----------------SGTTVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~-----------------~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
|+..+.+.|.--++-|.. +|-++ .+....|+.++++++++-|+++|+.|++|.+..
T Consensus 263 dl~Gi~~kLdyLk~LGvt--~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVE--TIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp CHHHHHTTHHHHHHHTCC--EEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CHHHHHHHhHHHHHcCCC--EEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 666777766655544533 22222 223445667778999999999999999998754
No 391
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=21.82 E-value=1.1e+02 Score=28.71 Aligned_cols=60 Identities=15% Similarity=-0.007 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCC-ccccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTT-VLGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
+.++..+.|+...+.|..-.+-++-.+.. ..-....+++|.++|+++|+.+++|-.....
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~ 99 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVF 99 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 56666778887777775533333322221 1223356899999999999999999866554
No 392
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=21.63 E-value=37 Score=34.49 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=19.9
Q ss_pred CccccccChHHHHHHHHHcCcEEEeecccc
Q psy12303 235 TVLGAFDPIEEIADICQKYNMWLHVDAAWG 264 (480)
Q Consensus 235 ~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~ 264 (480)
...|..++++++++-|+++|+.|++|.++.
T Consensus 197 ~~~G~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 197 SAYGTPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 344555667777777777777777776554
No 393
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=21.42 E-value=34 Score=30.99 Aligned_cols=57 Identities=21% Similarity=0.193 Sum_probs=33.2
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc---cChHHHHHHHHHc---CcEEEe
Q psy12303 199 PSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF---DPIEEIADICQKY---NMWLHV 259 (480)
Q Consensus 199 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~~l~~I~~i~~~~---~~~l~v 259 (480)
|. +++.+|.+.+++.++...+.|..-.+ ..|||--+.. +.-.++.+.+.+. ++++++
T Consensus 12 Pf-~dg~iD~~~l~~lv~~li~~Gv~gl~---~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (292)
T 2vc6_A 12 PF-ADDRIDEVALHDLVEWQIEEGSFGLV---PCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIA 74 (292)
T ss_dssp CE-ETTEECHHHHHHHHHHHHHTTCSEEE---TTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred Cc-CCCCcCHHHHHHHHHHHHHcCCCEEE---ECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44 57889999999999888777754322 2344434433 3344555555443 345543
No 394
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=21.21 E-value=1.5e+02 Score=27.72 Aligned_cols=60 Identities=15% Similarity=0.030 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeccCCCc-cccccChHHHHHHHHHcCcEEEeecccccc
Q psy12303 207 IPSELERLVLERKAKGDIPFFVNCTSGTTV-LGAFDPIEEIADICQKYNMWLHVDAAWGGG 266 (480)
Q Consensus 207 d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~-~G~~~~l~~I~~i~~~~~~~l~vD~a~~~~ 266 (480)
+.++..+.|+...+.|..-.+-.+-.+... .-....+++|.++|+++|+.+++|-.....
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l 75 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEAL 75 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 445566778877777876444444333221 122355899999999999999999765443
No 395
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=21.17 E-value=79 Score=29.35 Aligned_cols=19 Identities=16% Similarity=0.108 Sum_probs=14.6
Q ss_pred cCcEEEeeccccccccccc
Q psy12303 253 YNMWLHVDAAWGGGLLLSK 271 (480)
Q Consensus 253 ~~~~l~vD~a~~~~~~~~~ 271 (480)
..+.++.|+||+|+.+..+
T Consensus 185 ~~vt~IlD~ChSGt~ldlp 203 (350)
T 4f6o_A 185 VRLTALFDSCHSGTVLDLP 203 (350)
T ss_dssp CEEEEEECSSSCTTTTCCS
T ss_pred CeEEEEEccCCCCcccccc
Confidence 3577899999999887443
No 396
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.13 E-value=3.4e+02 Score=23.32 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=27.4
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..++.|- -|.+++++.+++..++..++-.|+.+++....+.+
T Consensus 74 ~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~ 117 (266)
T 3o38_A 74 RVEAVVCDV---TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV 117 (266)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred ceEEEEeCC---CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCc
Confidence 677777763 37788888777654432335677777775554443
No 397
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.03 E-value=2.7e+02 Score=23.96 Aligned_cols=63 Identities=14% Similarity=0.073 Sum_probs=34.6
Q ss_pred EEEecCCCchhHHHHHHHcCCCCCCeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 170 VMFTSDQCHYSVRSCAAVCGLGTDNCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 170 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++++.. ...........++. ++..++.|- -|.+++++.++...+.-.++-.++-+++....+.
T Consensus 35 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (255)
T 4eso_A 35 VLLTGR-NESNIARIREEFGP---RVHALRSDI---ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP 97 (255)
T ss_dssp EEEEES-CHHHHHHHHHHHGG---GEEEEECCT---TCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBC
T ss_pred EEEEeC-CHHHHHHHHHHhCC---cceEEEccC---CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 455543 33344444444443 566676663 3777777777654433223667777776554443
No 398
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=20.89 E-value=4.4e+02 Score=23.38 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc-cChHHHHHHHHHcCcEEEeeccc
Q psy12303 205 RLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF-DPIEEIADICQKYNMWLHVDAAW 263 (480)
Q Consensus 205 ~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~~l~~I~~i~~~~~~~l~vD~a~ 263 (480)
.++.+++++.++...+.-....+|+++ +..+.+.. +-+.++.+.++++|+.+.+|-..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 172 (320)
T 3ie7_A 114 TVSQTNKDNLLKQIAKKVKKEDMVVIA-GSPPPHYTLSDFKELLRTVKATGAFLGCDNSG 172 (320)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTCEEEEE-SCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh
Confidence 467777766554332211124455553 33332221 33678888899999999999753
No 399
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=20.79 E-value=1.1e+02 Score=16.20 Aligned_cols=18 Identities=11% Similarity=0.311 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhhcc
Q psy12303 7 FLKQLVNILLNYIKESND 24 (480)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (480)
.++++.+.|.||+.++..
T Consensus 4 ~~kkIgQkIkdFf~~l~p 21 (26)
T 2fcg_F 4 EFKRIVQRIKDFLRNLVP 21 (26)
T ss_dssp SHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 367888999999988764
No 400
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=20.67 E-value=81 Score=29.20 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=38.7
Q ss_pred CeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHHHHHHHcCCCCCCeEEeeC
Q psy12303 131 DSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVRSCAAVCGLGTDNCVEVPS 200 (480)
Q Consensus 131 ~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~v~~ 200 (480)
.++-+++|..+.-.|+.+++. |+ +.+|++++..-..-...++.+|. +|+.++.
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~---------G~-----~~~IvmP~~~~~~k~~~~~~~GA---~Vv~v~~ 141 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMK---------GY-----KMVLTMPSYTSLERRVTMRAFGA---ELILTDP 141 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHH---------TC-----EEEEEEETTSCHHHHHHHHHTTC---EEEEECG
T ss_pred EEEEeCCcHHHHHHHHHHHHc---------CC-----cEEEEECCCChHHHHHHHHHcCC---EEEEECC
Confidence 467777888887777766653 44 56888888777777778888888 7777654
No 401
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=20.55 E-value=2.1e+02 Score=23.92 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=39.8
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccccChHHHHHHHHHcC----cEEEeecc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAFDPIEEIADICQKYN----MWLHVDAA 262 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~~~l~~I~~i~~~~~----~~l~vD~a 262 (480)
+++.+..+ +.++++.+++++.. |.+|.++.-.+ .....+.++.+.+++.+ +.+++=|+
T Consensus 118 ~v~~LG~~----vp~~~l~~~~~~~~-----~d~v~lS~~~~--~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 118 TVYNLGVD----IEPGKFVEAVKKYQ-----PDIVGMSALLT--TTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp EEEECCSS----BCHHHHHHHHHHHC-----CSEEEEECCSG--GGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred EEEECCCC----CCHHHHHHHHHHcC-----CCEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 77666543 67888888887652 66777766533 34667888888888765 67777554
No 402
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.55 E-value=3.3e+02 Score=23.74 Aligned_cols=44 Identities=11% Similarity=0.184 Sum_probs=26.1
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..++-.++-+++-+++....+.+
T Consensus 82 ~~~~~~~Dl---~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (276)
T 3r1i_A 82 KALPIRCDV---TQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM 125 (276)
T ss_dssp CCEEEECCT---TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred eEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 556666653 37788888777654332235567777775554443
No 403
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.53 E-value=4e+02 Score=23.12 Aligned_cols=43 Identities=16% Similarity=0.049 Sum_probs=22.8
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCcccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGA 239 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~ 239 (480)
++..+..|- -|.+++++.+++..++-.++-+++-+++....+.
T Consensus 78 ~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 120 (280)
T 3pgx_A 78 KALTRVLDV---RDDAALRELVADGMEQFGRLDVVVANAGVLSWGR 120 (280)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBC
T ss_pred eEEEEEcCC---CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 556665552 2666777666654332223456666666544443
No 404
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.24 E-value=3.5e+02 Score=24.22 Aligned_cols=75 Identities=19% Similarity=0.131 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhCCC--------CCCeEECCChhHHHHHHHHHHHHhcCchhHhcCCCccCCceEEEecCCCchhHH
Q psy12303 111 ILMETVVLEKMRQIIGWQ--------GGDSILAPGGSISNLYAFLAARHKMFPTYKEKGLSAIKGQLVMFTSDQCHYSVR 182 (480)
Q Consensus 111 ~~~e~~~~~~la~~~g~~--------~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~g~~~~~g~~~vl~~~~~h~s~~ 182 (480)
.++++++ +.+++-+|.+ +-.+.+..||...|+.+|..+... |. .+.+...++|+ |+...
T Consensus 70 ~~L~~~f-~~la~~~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~--------g~--l~~~i~~Visn--~~~~~ 136 (292)
T 3lou_A 70 DALRREF-EPIAERFRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKM--------GE--LKMDIVGIVSN--HPDFA 136 (292)
T ss_dssp HHHHHHH-HHHHHHHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHH--------TS--SCCEEEEEEES--SSTTH
T ss_pred HHHHHHH-HHHHHhcCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHc--------CC--CCcEEEEEEeC--cHHHH
Confidence 3455554 3456666642 123433333444577777655432 21 12354566663 44445
Q ss_pred HHHHHcCCCCCCeEEeeCC
Q psy12303 183 SCAAVCGLGTDNCVEVPSD 201 (480)
Q Consensus 183 ~~~~~~g~~~~~v~~v~~~ 201 (480)
..++..|+ .+..+|..
T Consensus 137 ~~A~~~gI---p~~~~~~~ 152 (292)
T 3lou_A 137 PLAAQHGL---PFRHFPIT 152 (292)
T ss_dssp HHHHHTTC---CEEECCCC
T ss_pred HHHHHcCC---CEEEeCCC
Confidence 56888888 77777764
No 405
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=20.23 E-value=2.2e+02 Score=25.31 Aligned_cols=44 Identities=23% Similarity=0.069 Sum_probs=26.9
Q ss_pred CeEEeeCCCCCCCCHHHHHHHHHHHHHCCCccEEEEeccCCCccccc
Q psy12303 194 NCVEVPSDKRGRLIPSELERLVLERKAKGDIPFFVNCTSGTTVLGAF 240 (480)
Q Consensus 194 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~~~~G~~ 240 (480)
++..+..|- -|.+++++.+++..+....+-+|+-+++....+.+
T Consensus 81 ~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 124 (301)
T 3tjr_A 81 DAHGVVCDV---RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPL 124 (301)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred ceEEEEccC---CCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 666777663 37778888777654332235577777776555543
No 406
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.21 E-value=2.6e+02 Score=24.39 Aligned_cols=19 Identities=11% Similarity=0.144 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHhcCCCCeEE
Q psy12303 371 LMELAEYMVKKIKSMPDKFYL 391 (480)
Q Consensus 371 ~~~l~~~l~~~l~~~~~g~~~ 391 (480)
...+++.|..++.. .|+++
T Consensus 164 l~~ltr~lA~ela~--~gIrV 182 (254)
T 4fn4_A 164 LIGLTRSIAAHYGD--QGIRA 182 (254)
T ss_dssp HHHHHHHHHHHHGG--GTEEE
T ss_pred HHHHHHHHHHHhhh--hCeEE
Confidence 45567777778877 57776
No 407
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=20.20 E-value=40 Score=34.95 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=38.5
Q ss_pred CCHHHHHHHH-HHHHHCCCccEEEE--ec---------------cCCCccccccChHHHHHHHHHcCcEEEeeccccc
Q psy12303 206 LIPSELERLV-LERKAKGDIPFFVN--CT---------------SGTTVLGAFDPIEEIADICQKYNMWLHVDAAWGG 265 (480)
Q Consensus 206 ~d~~~L~~~i-~~~~~~~~~~~~v~--~~---------------~~~~~~G~~~~l~~I~~i~~~~~~~l~vD~a~~~ 265 (480)
-+...+.+.+ ...++-|....-+. .. .++...|+.++++++++-|+++|+.|++|.++.-
T Consensus 260 G~~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH 337 (722)
T 3k1d_A 260 LSYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAH 337 (722)
T ss_dssp CCHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeec
Confidence 4677777766 54445564432221 11 1223345567789999999999999999987543
Done!