BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12304
(620 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/523 (43%), Positives = 311/523 (59%), Gaps = 70/523 (13%)
Query: 103 SKEFLPKFPMPLD------TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASY 156
S E P+ P P + T L+ LD+F+GCGGL EG QAG+A+ CW++E E A S+
Sbjct: 780 SSEETPREPEPTEANAQPITRLRGLDVFAGCGGLSEGFHQAGIAESCWAIEKEEPAAQSF 839
Query: 157 DANFQECSVIQDDCNLVLKSLLKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARE 215
N +V DDCNL+LK++++G T + G LPQK EV+L+ GPPCQGFS +NR
Sbjct: 840 RLNNPGATVFTDDCNLLLKAVMEGQTVNDVGQKLPQKGEVELLCGGPPCQGFSGMNRFNS 899
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
E S KN L+ ++LS+CD ++PK+ +LENV V F ++ +L+ CLL+M YQ TF
Sbjct: 900 REYSMFKNSLIASYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLALRCLLRMGYQCTFG 959
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF-------SNQLFTINGNLVANKT 328
VLQ+GNYGV Q+R R +ILA+ PG KLP +P+PLH F S Q+ N +
Sbjct: 960 VLQAGNYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFAPRGMQLSVQVGDKRYNSCVQRM 1019
Query: 329 SHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELL 386
S AP+R+I+VRDA+SDLP V GA + ++HFQRM++ + +
Sbjct: 1020 SSAPFRTISVRDAMSDLPEVKNGAKAEKISYSVEAQSHFQRMIRGHQH--------QPVC 1071
Query: 387 QDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQH----SYTEKLKYNAKKK- 441
+DHICK +PL+ R++ IP +P ADWRDLPNI V+L G YT + K N +
Sbjct: 1072 RDHICKDFNPLVHARMQHIPLYPGADWRDLPNIEVRLSDGSKCKKLCYTHRDKKNGRSPS 1131
Query: 442 ---KSVCDCKSSSSCTSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKN 497
+ VC C S SC + ++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1132 GALRGVCQCADSGSCDAMDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------- 1183
Query: 498 TIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREY 557
F T VT P P+ KQG++LHPEQ RV++VRE
Sbjct: 1184 -----------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVREC 1214
Query: 558 ARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
AR+QGFPD+Y F G I D ++Q+GNAVPPP+AKAIG EI KC+
Sbjct: 1215 ARSQGFPDTYRFFGNIQDRHRQVGNAVPPPMAKAIGSEIKKCV 1257
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 309/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1133 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1192
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1193 MAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1252
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1253 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1312
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1313 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1372
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1373 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1424
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C SS+ +G + +
Sbjct: 1425 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDKKNGC----SSTGALRGVCSCVEAGKA 1478
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1479 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1517
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1518 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1577
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1578 LAKAIGLEIKRCM 1590
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 309/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1316 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C SS+ +G + +
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDKKNGC----SSTGALRGVCSCVEAGKA 1481
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1482 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1520
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1521 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1580
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1581 LAKAIGLEIKRCM 1593
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/501 (44%), Positives = 300/501 (59%), Gaps = 62/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EGL QAGVA+ W++E + + A +Y N + SV DCN L+ +
Sbjct: 930 LRTLDVFAGCGGLSEGLKQAGVAESLWAIENDTAAAHAYRLNNPKASVFTTDCNSFLEKV 989
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ G T G SLP+K EVDL+ GPPCQGFS +NR S KN L+ +F+SFCD ++
Sbjct: 990 INGETSLGGQSLPKKGEVDLLCGGPPCQGFSGMNRFNSRAYSSFKNSLIVSFISFCDYYK 1049
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P++ ++ENV V F K+ +L+ CL +M YQ TF +LQ+G+YG+ Q+R R++++A+
Sbjct: 1050 PRFFLMENVRNFVSFKKSAVLKLTLSCLSRMGYQCTFGILQAGSYGIPQTRRRMILIAAA 1109
Query: 298 PGYKLPSFPQPLHAFSNQL--FTINGNLVANKT-----SHAPYRSITVRDAISDLPRVSQ 350
PG LP FP PLH FS T++ + V T APYR+ITV DA+SDLP++
Sbjct: 1110 PGEILPRFPNPLHVFSKSTCQLTVDVDNVKYFTFTDVHESAPYRAITVYDALSDLPKIKS 1169
Query: 351 GAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
G+N + N P THFQR M+ G ++ L DHICK L PL+E R+ LIP+
Sbjct: 1170 GSNEVVMRYENDPLTHFQRKMRSG-------MDDELALYDHICKDLGPLVEARMGLIPTK 1222
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCTSKG-QK 459
+DWRDLPNI V+L G + + KYN KK + +C C SC+ + Q
Sbjct: 1223 TGSDWRDLPNIVVRLSDGTCTTKLEYKYNDKKAGVSSTGAPRGICSCSEGKSCSLRDKQV 1282
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
NT+IPW L HTA+R+N+W G+ GR+ WD F
Sbjct: 1283 NTLIPWCLPHTANRHNHWAGLYGRIEWD-GF----------------------------- 1312
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
F T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F G I D ++Q
Sbjct: 1313 -------FSTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGSIQDKHRQ 1365
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGNAVPPPLAKAIG EI K +
Sbjct: 1366 IGNAVPPPLAKAIGLEIRKSV 1386
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 309/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1099 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1158
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1159 MAGEATNPRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1218
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1219 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1278
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1279 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1338
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1339 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1390
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C SS+ +G + +
Sbjct: 1391 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDKKNGC----SSTGALRGVCSCVEAGKA 1444
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1445 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1483
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1484 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1543
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1544 LAKAIGLEIKRCM 1556
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 309/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1199 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1258
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1259 MAGEATNPRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1318
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1319 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1378
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1379 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1438
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1439 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1490
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C SS+ +G + +
Sbjct: 1491 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDKKNGC----SSTGALRGVCSCVEAGKA 1544
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1545 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1583
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1584 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1643
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1644 LAKAIGLEIKRCM 1656
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/628 (39%), Positives = 339/628 (53%), Gaps = 84/628 (13%)
Query: 5 VQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLS-VIKKTVCVDFVTNDSSEEEILD 61
V+ + RP DT LG F D + ++ ++ ++L+ V+ K V V D EE +
Sbjct: 807 VKRIYRPADTHLGRDAGFRSDWNLVYWSDEIHKLELNKVVDKCVLVCSTAIDEPIEEFVR 866
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIH---------SKEFLPKFP- 111
+Y ++ F P P+E I +K P +P
Sbjct: 867 G----GPNRMYFNKAYNPAEREFEPP---PVEAERIGSSSKGKGGKSLKSAKSIQPTYPS 919
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
P PLK LD+F+GCGGL EGL Q+GVAK W++E E + A ++ N + +V DDCN
Sbjct: 920 YPKIEPLKTLDIFAGCGGLSEGLHQSGVAKTYWAIECEPTAAQAFRLNNPDAAVFTDDCN 979
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+LK + G + G LP K V+L+ GPPCQGFS +NR + S +N L+ ++LS
Sbjct: 980 TILKMAIDGQLEQNGQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQYSSFRNSLIVSYLS 1039
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++P++ ILENV V F +N +L+ CL++M YQ TF VLQ+GNYGV+Q+R R
Sbjct: 1040 YCDYYRPRFFILENVRNFVSFKRNMVLKLTMRCLVRMGYQCTFGVLQAGNYGVSQTRRRA 1099
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISD 344
I A+ PG KLP +P+P H FS + ++ + +K APYR++TVRDA+SD
Sbjct: 1100 FIFAAAPGEKLPLYPEPTHVFSRRGCQLSVAVGRDKFYSNCRWLLSAPYRTVTVRDAMSD 1159
Query: 345 LPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP + GA + P++HFQR M+ +L+DHI K ++PL+E RI
Sbjct: 1160 LPEIPNGAKQEEISYGGDPQSHFQRWMR------GTDSEQSSVLRDHISKEMAPLVEARI 1213
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK---------KSVCDCKSSSSC 453
IPS P +DWRDLPN V+L G T KL+Y + K + VC C C
Sbjct: 1214 AFIPSKPGSDWRDLPNTEVRLKDG--VMTVKLRYTHEDKNGRSLSGAMRGVCSCAEGRQC 1271
Query: 454 TS-KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
Q NT+IPW L HT +R+NNW G+ GRL WD F
Sbjct: 1272 DPLDKQHNTLIPWCLPHTGNRHNNWAGLYGRLEWD-GF---------------------- 1308
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
F T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G
Sbjct: 1309 --------------FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGN 1354
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPLA+AIG EI KC+
Sbjct: 1355 ITDKHRQVGNAVPPPLARAIGLEIHKCV 1382
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/506 (43%), Positives = 302/506 (59%), Gaps = 48/506 (9%)
Query: 108 PKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
P FP + L+ LD+F+GCGGL EGL QAGVA+ W++E++ + A +Y N +V
Sbjct: 871 PDFPQ-IKKKLRTLDVFAGCGGLSEGLHQAGVAESSWAIEVDEAAAHAYRLNNPNAAVFT 929
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
DCN LK ++ G T G LPQ+ EVDL+ GPPCQGFS +NR S KN LV
Sbjct: 930 GDCNAYLKKVMDGETMAGGQRLPQRGEVDLLCGGPPCQGFSGMNRFNSRAYSLFKNSLVV 989
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
++LS+CD ++P++ I+ENV V F K+ +L+ CL++M YQ TF +LQ+GNYGV Q+
Sbjct: 990 SYLSYCDYYRPRFFIMENVRNFVTFKKSMVLKLTLRCLIRMGYQCTFGILQAGNYGVPQT 1049
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVR 339
R R++ILA+ PG LP +P PLH FS ++ ++ NK APY+ T+R
Sbjct: 1050 RRRMIILAAAPGEVLPKYPNPLHVFSKSACNLS-VVIDNKKYFPTYDWVESAPYKVTTIR 1108
Query: 340 DAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
DA+SDLP + G N + + P +HFQR ++ G + D LL DHICK L PL
Sbjct: 1109 DALSDLPSIKSGKNEDVMSYGSEPLSHFQRKLRAG--VSD------SLLLDHICKDLGPL 1160
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
+E R+ IP+ +DWRDLPNI + L G H T KLKYN KK+ KSS+
Sbjct: 1161 VEARMAHIPTVSGSDWRDLPNIVIPLSDGNH--TNKLKYNYHDKKA---GKSSTGAL--- 1212
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
+GV E + Q NT+IPW L HT +R+N+W G+
Sbjct: 1213 --------------------RGVCSCCTGKECNPLDRQDNTLIPWCLPHTGNRHNHWAGL 1252
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ WD F T +T P P+ KQG++LHP+Q RV++VRE AR+QGFPD++ F G I D +
Sbjct: 1253 YGRIEWDGFFSTTITNPEPMGKQGRVLHPDQTRVVSVRECARSQGFPDNFRFYGNIQDKH 1312
Query: 578 KQIGNAVPPPLAKAIGYEIIKCIGNA 603
+Q+GNAVPPPLA AIG EI K + A
Sbjct: 1313 RQVGNAVPPPLAAAIGMEIRKSVSIA 1338
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIK-KTVCVDFVTNDSSEE---EI 59
H WL R ++T+LG+ ++S LFL + C+ + +S +K KT + T D+ E
Sbjct: 528 HATWLWRGSETVLGETS--NSSELFLVDDCQDVPVSYVKSKTTVLHRDTPDNWNELGNTS 585
Query: 60 LDNEHEEKDETIYTEYYRKTKD 81
++N +E E I + YY+K D
Sbjct: 586 VNNSMDESKEDITSFYYQKRYD 607
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 303/500 (60%), Gaps = 61/500 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EG QAGVA CW+VE++ A ++ N + +V DDCN++L +
Sbjct: 984 LRMLDVFAGCGGLSEGFHQAGVADSCWAVEIDEPAAQAFRLNNSQTTVFTDDCNILLSLV 1043
Query: 178 LKG-HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T +G LPQK +V+L+ GPPCQGFS +NR E S+ KN LV ++LSFC+ +
Sbjct: 1044 MEGAKTNSRGQLLPQKGDVELLCGGPPCQGFSGMNRFNSREYSQFKNSLVISYLSFCEYY 1103
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F K+ +L+ CL+KM YQ TF VLQ+G YGV Q+R R +ILA+
Sbjct: 1104 RPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVLQAGQYGVPQTRRRAIILAA 1163
Query: 297 KPGYKLPSFPQPLHAFSNQL--FTINGNLVANKTS----HAPYRSITVRDAISDLPRVSQ 350
PG KLP FP P H FS + T+ N + + S APYR+ITVRD++SDLP +
Sbjct: 1164 APGEKLPHFPNPTHVFSPRACQLTVVVNDIKYEGSIRMDSAPYRTITVRDSMSDLPHIKN 1223
Query: 351 GA--NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
G+ ++ P H+QR+M+ + +L DHICK ++PL+ R+R IP
Sbjct: 1224 GSAVRSMNYNGEPHCHYQRLMRGNQH--------QPVLYDHICKEMNPLVAARMRFIPIG 1275
Query: 409 PNADWRDLPNICVKL------PRGQHSYTEKLKYNAKKK--KSVCDCKSSSSCTSKGQKN 460
P +DWRDLPN C++L P+ Q+++ +K AK K + VC C + C
Sbjct: 1276 PGSDWRDLPNKCIRLSDGTTAPKLQYTHHDKKNGRAKNKSLRGVCPCATGQPC------- 1328
Query: 461 TIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGR 520
D S+ G T+IPW L HT +R+N+W G+ GR
Sbjct: 1329 --------------------------DSSYRQYG---TLIPWCLPHTGNRHNHWAGLYGR 1359
Query: 521 LAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
L WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD++ F G I D ++Q+
Sbjct: 1360 LEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTFRFFGTILDKHRQV 1419
Query: 581 GNAVPPPLAKAIGYEIIKCI 600
GNAVPPPLAKAIG EI + +
Sbjct: 1420 GNAVPPPLAKAIGLEIKRSV 1439
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/518 (43%), Positives = 310/518 (59%), Gaps = 66/518 (12%)
Query: 102 HSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ 161
SKE P P P T L+ LD+F+GCGGL EG QAG+A W+VE+ A +Y N
Sbjct: 785 ESKEQQP--PSPAFTKLRMLDVFAGCGGLSEGFHQAGIADSKWAVEVMEPAAQAYRLNNP 842
Query: 162 ECSVIQDDCNLVLKSLLKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
+C+V DDCN++LK +++G T + G LPQK +V+L+ GPPCQGFS +NR + S+
Sbjct: 843 DCTVFTDDCNILLKLVMEGATTNSTGQRLPQKGDVELLCGGPPCQGFSGMNRFNSRQYSQ 902
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSG 280
KN LV +FLS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G
Sbjct: 903 FKNSLVVSFLSYCDFYRPKFFLLENVRNFVSFKSSMVLKLTLRCLIRMGYQCTFGVLQAG 962
Query: 281 NYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTINGNLVANKTSH----APY 333
NYGVAQ+R R +ILA+ PG KLP +P+P H FS QL + N + APY
Sbjct: 963 NYGVAQTRRRAIILAAAPGEKLPMYPEPQHVFSPRACQLSVMVDEKKYNSNTQWRQSAPY 1022
Query: 334 RSITVRDAISDLPRVSQG--ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHIC 391
R+IT+RD +SDLP + G A + P+++FQ++++ G++ I L+DHIC
Sbjct: 1023 RTITIRDTMSDLPSIRNGHSATEISYDGEPRSYFQKIIR-GNQYQPI-------LRDHIC 1074
Query: 392 KILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHS----YTEKLKYNAKKK----KS 443
K ++ L+E R+R +P P +DWRDLPNI V+L G S YT + K N +
Sbjct: 1075 KDMNALVEARMRHVPLAPGSDWRDLPNIVVRLSDGSSSKLLQYTHEDKKNGTSSTGALRG 1134
Query: 444 VCDCKSSSSCTSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPW 502
VC C ++C ++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1135 VCSCAEGTACDQNDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------------ 1181
Query: 503 SLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQG 562
F T VT P P+ KQG++LHPEQ RV++VRE AR+QG
Sbjct: 1182 ------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1217
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
FPD+Y F G I D ++Q+GNAVPPP+A AIG EI KC+
Sbjct: 1218 FPDTYRFYGSILDKHRQVGNAVPPPMAAAIGREIKKCL 1255
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 309/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 463 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 522
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 523 MAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 582
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 583 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 642
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG +LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 643 APGEQLPLFPEPLHVFAPRACQLXXVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 702
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 703 NGASSLEILYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 754
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C SS+ +G + +
Sbjct: 755 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDKKNGC----SSTGALRGVCSCVEAGKA 808
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 809 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 847
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 848 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 907
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 908 LAKAIGLEIKRCM 920
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 303/493 (61%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC---------------------- 1463
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
S + +GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1464 ----SSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1519
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1520 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1579
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1580 LAKAIGLEIKRCM 1592
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 307/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1201
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1202 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1261
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1262 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1321
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1322 APGEKLPLFPEPLHVFAPRACQLSVVVDDRKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1381
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1382 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1433
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SS+ +G + +
Sbjct: 1434 APGSDWRDLPNIEVRLSDG--TMARKLRYTYHDRKN----GRSSTGALRGVCSCVEAGKA 1487
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1488 CDSAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1526
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1527 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1586
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1587 LAKAIGLEIKRCM 1599
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 303/493 (61%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 855 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 914
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 915 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 974
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 975 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1034
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1035 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1094
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1095 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1146
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C
Sbjct: 1147 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC---------------------- 1182
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
S + +GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1183 ----SSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1238
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1239 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1298
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1299 LAKAIGLEIKRCM 1311
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/491 (44%), Positives = 307/491 (62%), Gaps = 43/491 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1135 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAHAFRLNNPGSTVFTEDCNVLLKLV 1194
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1195 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1254
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1255 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1314
Query: 297 KPGYKLPSFPQPLHA-FSNQLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVSQG 351
PG +LP FP+PL A + QL + + V+N T S P+R+ITVRD +SDLP + G
Sbjct: 1315 APGEQLPLFPEPLFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIRNG 1374
Query: 352 ANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
A+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP P
Sbjct: 1375 ASAQDISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPLAP 1426
Query: 410 NADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVH 469
+DWRDLPNI V+L G + KL+YN KK+ C SS+ +G + +
Sbjct: 1427 GSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC----SSTGALRGVCSCVEVGKACD 1480
Query: 470 TASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDT 529
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1481 PAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFST 1519
Query: 530 IVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPPLA
Sbjct: 1520 TVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLA 1579
Query: 590 KAIGYEIIKCI 600
KAIG EI +C+
Sbjct: 1580 KAIGLEIKRCM 1590
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 301/493 (61%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEISYNGEPQSWFQRQLR-GSQYQPT-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC---------------------- 1463
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
S +GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1464 ----SSTGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1519
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1520 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1579
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1580 LAKAIGLEIKRCM 1592
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/504 (44%), Positives = 300/504 (59%), Gaps = 64/504 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EGL Q+GV+K W++E + A+++ N +V +DCN +LK +
Sbjct: 872 LRTLDVFAGCGGLSEGLHQSGVSKTLWAIEQDSDAASAFKQNNPNATVFTEDCNTLLKEV 931
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G ++ KG LPQK EVDLI GPPCQGFS +NR + S+ KN LV +FLS+CD F
Sbjct: 932 MSGKLKNDKGQCLPQKGEVDLICGGPPCQGFSGMNRFNSRQYSQFKNSLVVSFLSYCDYF 991
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PKY ILENV V F ++ +L+ +CL+ M YQ TF VLQ+GNYG+ Q+R R+ ILA+
Sbjct: 992 RPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTFGVLQAGNYGIPQTRRRLFILAA 1051
Query: 297 KPGYKLPSFPQPLHAF----SNQLFTINGNLVANK---TSHAPYRSITVRDAISDLPRVS 349
P KLP FP+P H F SN T++ ++ AP R+ITVRDA+SDLP +
Sbjct: 1052 APNLKLPLFPEPTHVFSLRASNLQVTVDDKRFTTNCKWSTSAPLRTITVRDALSDLPEIP 1111
Query: 350 QGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ + ++ KTHFQR+++ + +L+DH CK +SPL+E RIR IP+
Sbjct: 1112 NGADRVVMNYNEDCKTHFQRLIRGNQS--------QPILRDHTCKYMSPLVEARIRHIPT 1163
Query: 408 FPNADWRDLPNICVKLPRG----QHSYTEKLKYNAKKK----KSVCDCKSSSSCTS-KGQ 458
+DWRDLPNI + L G Q Y + N K + VC C S C Q
Sbjct: 1164 TKGSDWRDLPNISMTLSDGTTIKQLKYMHHDRKNGKSPQGYLRGVCACASGRRCDPLDRQ 1223
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
NT+IPW L HTA+R+N+W G+ GRL W
Sbjct: 1224 YNTLIPWCLPHTANRHNHWSGLYGRLEW-------------------------------- 1251
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F G I + ++
Sbjct: 1252 -----DGYFSTTVTNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFQFYGPIIEKHR 1306
Query: 579 QIGNAVPPPLAKAIGYEIIKCIGN 602
Q+GNAVPPP+A+AIG EI K I N
Sbjct: 1307 QVGNAVPPPMARAIGLEIRKSIIN 1330
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/501 (42%), Positives = 297/501 (59%), Gaps = 62/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1190
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1191 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1250
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1251 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1310
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH-------APYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS++ +++ + K APYR+ITVRD +SDLP ++
Sbjct: 1311 APGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQWCLSAPYRTITVRDTMSDLPTIN 1370
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA + P++ FQ+ ++ G++ I L+DHICK +S L+ R++ IP
Sbjct: 1371 NGAQKLEISYDGEPQSDFQKKIR-GNQYQPI-------LRDHICKDMSSLVAARMKHIPL 1422
Query: 408 FPNADWRDLPNICVKLPRG----QHSYTEKLKYNAKKK----KSVCDCKSSSSCTSKGQK 459
P +DWRDLPNI V L G + YT K K N K + VC C +C +
Sbjct: 1423 APGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALRGVCSCAEGDACDPSDR- 1481
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
Q +T+IPW L HT +R+NNW G+ G
Sbjct: 1482 -----------------------------------QFSTLIPWCLPHTGNRHNNWAGLYG 1506
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++Q
Sbjct: 1507 RLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQ 1566
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGNAVPPP+A AIG EI C+
Sbjct: 1567 IGNAVPPPMAAAIGMEIKVCL 1587
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/502 (42%), Positives = 295/502 (58%), Gaps = 68/502 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+ FSGCGGL EGL Q+G+A W++++++ + ++ NF + + DCN LK +
Sbjct: 698 LKTLNAFSGCGGLAEGLRQSGIADIAWAIDIDKPTSEAFKLNFSNIVMFESDCNFFLKEV 757
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L G T K G P+K EV+ + GPPCQGFS +NR E+S+ N L+ T+LSFCD +
Sbjct: 758 LSGKTFDKDGNRYPEKGEVEFLCGGPPCQGFSTMNRFTTKEESQYNNSLIITYLSFCDYY 817
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV + F K+ + + CL+ M YQ +F VLQ+GNYG+ QSR R+ ILA+
Sbjct: 818 RPKFFLLENVKNFLSFKKSLFFKHVLSCLVTMGYQCSFGVLQAGNYGLPQSRRRLFILAA 877
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK---------TSHAPYRSITVRDAISDLPR 347
PGY+LP FP+P H F L + + + AP+R++TVRDAI DLP
Sbjct: 878 APGYRLPFFPKPTHVFYGSLKNFDSEMNYTNFRCRFSKTLSPSAPFRNVTVRDAIFDLPP 937
Query: 348 VSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
V + +N +P T +QR +K S + +H DHI K +SPL E RIR IP+
Sbjct: 938 VGKASNKNFSSSP--TSYQRFLKTSS--YSVH--------DHITKEISPLNEARIRHIPA 985
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCTSKG-Q 458
DWRDLPNI V+L G + K Y+ +K + VC C S SCT K Q
Sbjct: 986 SKGCDWRDLPNIQVRLRDGTLTNLLKYSYHDRKNGKSCCGLLRGVCSCASGKSCTPKARQ 1045
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
NT+IPW L HTA+RNNNW G+ GRL WD GV
Sbjct: 1046 NNTLIPWFLAHTANRNNNWSGLYGRLDWD----------------------------GV- 1076
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
F+T+ T P P N+QGK+LHPE+DR++T+RE ARAQG PDS+ F G + D ++
Sbjct: 1077 --------FNTVTTNPEPSNQQGKVLHPEEDRIITIRESARAQGMPDSFKFYGAVADKFR 1128
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPP+A+AIG+EI+K +
Sbjct: 1129 QVGNAVPPPIARAIGHEILKSL 1150
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/635 (38%), Positives = 349/635 (54%), Gaps = 88/635 (13%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + D + LF ++ +D S ++ V+F D E
Sbjct: 1019 IKIRINKFYRPENTHRSASAFYGTDINLLFWSDEEAVVDFSDVQGRCTVEF--EDDLLEN 1076
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NAR-PLELAYIL---------KIIHSKEF 106
+ D D ++E Y K K F P +AR PL ++ KE
Sbjct: 1077 LQDYSKGGPDRFYFSEAY-NAKSKKFEDPPNHARNPLNKGKGKGKGKGNAKCQVSEPKEP 1135
Query: 107 LPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI 166
+P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1136 ETAIKLP---KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPSSTVF 1192
Query: 167 QDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S KN L
Sbjct: 1193 TEDCNVLLKLVMAGKLTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSTFKNSL 1252
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
V +FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVA
Sbjct: 1253 VVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVA 1312
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITV 338
Q+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T + PYR+ITV
Sbjct: 1313 QTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLTSGPYRTITV 1372
Query: 339 RDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSP 396
RD +SDLP + GA+ + P++ FQR ++D + + +L+DHICK +SP
Sbjct: 1373 RDTMSDLPEIQNGASAPEISYSGEPQSWFQRQLRDSA--------YQPILRDHICKDMSP 1424
Query: 397 LMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCD 446
L+ R++ IP P +DWRDLPNI V L G T+KL+YN KK+ VC
Sbjct: 1425 LVAARMKNIPRSPGSDWRDLPNIEVLLSDGVR--TKKLRYNFHDKKNGRSSTGAMRGVCS 1482
Query: 447 CKSSSSCTSKG-QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
C + C++ G Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1483 CYRGTRCSASGXQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------------- 1526
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGF D
Sbjct: 1527 ---------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFRD 1565
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+Y F G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1566 TYRFFGSILDRHRQVGNAVPPPLAKAIGLEIKLCM 1600
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 306/493 (62%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1207 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1266
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1267 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1326
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1327 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1386
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1387 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1446
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1447 NGASALEISYNGEPQSWFQRQLR-GTQYQPI-------LRDHICKDMSALVAARMRHIPL 1498
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1499 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1552
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1553 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1591
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1592 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1651
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1652 LAKAIGLEIKLCV 1664
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 303/493 (61%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+ SGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1106 LRTLDVSSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1165
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1166 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1225
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1226 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1285
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1286 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1345
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1346 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1397
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C+S G
Sbjct: 1398 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKN--------GCSSAGA--------- 1438
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1439 ---------LRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1489
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1490 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1549
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1550 LAKAIGLEIKRCM 1562
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1214
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1215 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1274
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1275 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1334
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1335 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1394
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1395 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1446
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1447 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1500
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1501 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1539
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1540 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1599
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1600 LAKAIGLEIKLCM 1612
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1214
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1215 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1274
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1275 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1334
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1335 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1394
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1395 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1446
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1447 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1500
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1501 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1539
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1540 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1599
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1600 LAKAIGLEIKLCM 1612
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 303/493 (61%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V + CN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEYCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MGGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C+S G
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKN--------GCSSAGA--------- 1468
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
+GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1469 ---------LRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1519
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1520 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1579
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1580 LAKAIGLEIKRCM 1592
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 305/494 (61%), Gaps = 47/494 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1134 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1193
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1194 MAGEETNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1253
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1254 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1313
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1314 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1373
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1374 NGASALEISYNGEPQSWFQRQLR-GTQYQPI-------LRDHICKDMSALVAARMRHIPL 1425
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K
Sbjct: 1426 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRK------------------------- 1458
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
+ S N +GV + ++ D ++ NT+IPW L HT +R+N+W G+ GRL WD
Sbjct: 1459 -NGYSSNRALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGF 1517
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPP
Sbjct: 1518 FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPP 1577
Query: 587 PLAKAIGYEIIKCI 600
PLAKAIG EI C+
Sbjct: 1578 PLAKAIGLEIKLCV 1591
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 305/494 (61%), Gaps = 47/494 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1148 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1207
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1208 MAGEETNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1267
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1268 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1327
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1328 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1387
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1388 NGASALEISYNGEPQSWFQRQLR-GTQYQPI-------LRDHICKDMSALVAARMRHIPL 1439
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K
Sbjct: 1440 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRK------------------------- 1472
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
+ S N +GV + ++ D ++ NT+IPW L HT +R+N+W G+ GRL WD
Sbjct: 1473 -NGYSSNRALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGF 1531
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPP
Sbjct: 1532 FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPP 1591
Query: 587 PLAKAIGYEIIKCI 600
PLAKAIG EI C+
Sbjct: 1592 PLAKAIGLEIKLCV 1605
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GTQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1484
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1485 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1523
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1524 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1583
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1584 LAKAIGLEIKLCM 1596
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1484
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1485 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1523
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1524 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1583
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1584 LAKAIGLEIKLCM 1596
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1034 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1093
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1094 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1153
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1154 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1213
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1214 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1273
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1274 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1325
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1326 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1379
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1380 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1418
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1419 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1478
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1479 LAKAIGLEIKLCM 1491
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1484
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1485 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1523
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1524 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1583
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1584 LAKAIGLEIKLCM 1596
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/527 (43%), Positives = 310/527 (58%), Gaps = 77/527 (14%)
Query: 111 PMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P L P L+ LD+FSGCGGL EG QAGV++ W++E+ A ++ N +V +D
Sbjct: 1046 PTELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTED 1105
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1106 CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1165
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1166 FLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1225
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVAN--KTSHAPYRSITVRDA 341
R ++LA+ PG KLP FP+PLH F+ QL + + V+N +T P+R+ITVRD
Sbjct: 1226 RRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDT 1285
Query: 342 ISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+
Sbjct: 1286 MSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVA 1337
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKS 449
R+R IP P +DWRDLPNI V+L G + T KL+Y +KK+ VC C
Sbjct: 1338 ARMRHIPLAPGSDWRDLPNIEVRLSDG--TSTRKLRYTHHEKKNGRSSSGALRGVCSCAE 1395
Query: 450 SSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTA 508
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1396 GKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------------------ 1436
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y
Sbjct: 1437 ------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1478
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI--------GNAVPPP 607
G I D ++Q+GNAVPPPLAKAIG EI C+ G AV PP
Sbjct: 1479 LFGNILDKHRQVGNAVPPPLAKAIGLEIRACVGARMREESGAAVAPP 1525
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1034 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1093
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1094 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1153
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1154 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1213
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1214 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1273
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1274 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1325
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1326 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1379
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1380 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1418
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1419 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1478
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1479 LAKAIGLEIKLCM 1491
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 302/489 (61%), Gaps = 45/489 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 862
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 863 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 922
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 923 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 982
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 983 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1042
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ + +L+DHICK +S L+ R+R IP
Sbjct: 1043 NGASALEISYNGEPQSWFQRQLRGA--------QYQPILRDHICKDMSALVAARMRHIPL 1094
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1095 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1148
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
H A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1149 CHPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1187
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1188 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1247
Query: 588 LAKAIGYEI 596
LAKAIG EI
Sbjct: 1248 LAKAIGLEI 1256
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1154 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1213
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1214 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1273
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1274 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1333
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1334 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1393
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1394 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1445
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1446 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1499
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1500 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1538
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1539 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1598
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1599 LAKAIGLEIKLCM 1611
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1214
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1215 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1274
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1275 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1334
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1335 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1394
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1395 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1446
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1447 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1500
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1501 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1539
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1540 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1599
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1600 LAKAIGLEIKLCM 1612
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1484
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1485 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1523
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1524 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1583
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1584 LAKAIGLEIKLCM 1596
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1260
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1261 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1320
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1321 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1380
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1381 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1440
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1441 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1492
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1493 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1546
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1547 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1585
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1586 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1645
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1646 LAKAIGLEIKLCM 1658
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1201 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1260
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1261 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1320
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1321 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1380
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1381 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1440
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1441 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1492
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1493 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1546
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1547 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1585
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1586 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1645
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1646 LAKAIGLEIKLCM 1658
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1125 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1184
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1185 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1244
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1245 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1304
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1305 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1364
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1365 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1416
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1417 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1470
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1471 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1509
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1510 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1569
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1570 LAKAIGLEIKLCM 1582
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 304/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHT-QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1484
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1485 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1523
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1524 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1583
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1584 LAKAIGLEIKLCM 1596
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1064 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1123
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1124 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1183
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1184 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1243
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1244 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1303
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1304 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1355
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1356 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1409
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1410 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1448
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1449 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1508
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1509 LAKAIGLEIKLCM 1521
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 303/494 (61%), Gaps = 48/494 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAG+A+ W++E E + A +Y N +V DDCN++LK +
Sbjct: 894 LKTLDVFAGCGGLSEGLHQAGIAENLWAIEKEEAAANAYRLNNPNTTVFTDDCNILLKKV 953
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T ++ G LPQK +V+L+ GPPCQGFS +NR + S KN LV ++LS+CD +
Sbjct: 954 MDGETTNEIGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSYLSYCDYY 1013
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P + I+ENV V F ++ +L+ CL++M YQ TF +LQ+GNYGV Q+R R++ILA+
Sbjct: 1014 RPNFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRIIILAA 1073
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ LV NK T AP+R+I+VRDA+ DLP +
Sbjct: 1074 APGQILPQYPEPTHVFSKRACQLSV-LVDNKKYSTNCSWTESAPFRTISVRDALFDLPEI 1132
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + N +HFQR ++ + LL+DHICK ++PL+E RI IP
Sbjct: 1133 KNGWNKEEMSYTNDAISHFQRRIRGKQ--------YQPLLRDHICKEMAPLVETRIAHIP 1184
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWS 466
+DWRDLPNI V+L G +Y++KL+Y KK KSS+
Sbjct: 1185 VASGSDWRDLPNITVRLSDG--TYSKKLEYTHDDKKV---GKSSTGA------------- 1226
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
++GV + Q NT+IPW L HT +R+N+W G+ GRL W+
Sbjct: 1227 ----------YRGVCSCCMGKQCDPTDKQFNTLIPWCLPHTGNRHNHWAGLYGRLEWNGF 1276
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
F T +T P P+ KQG++LHP Q RV++VRE AR+QGFPDS+ F G I D ++QIGNAVPP
Sbjct: 1277 FSTTITNPEPMGKQGRVLHPVQTRVVSVRECARSQGFPDSFRFYGTILDKHRQIGNAVPP 1336
Query: 587 PLAKAIGYEIIKCI 600
PL AIG+E+ KC+
Sbjct: 1337 PLGVAIGHELRKCL 1350
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 300/503 (59%), Gaps = 64/503 (12%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ LD+F+GCGGL EGL QAGVA+ W++E + + +Y N + C V +DCN +LK+
Sbjct: 945 PLRTLDVFAGCGGLSEGLHQAGVAECKWAIENVEAASHAYSLNNKSCIVFNEDCNALLKT 1004
Query: 177 LLKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
++ G G+ LP + EV+L+ GPPCQGFS +NR E S KN LV ++LSFCD
Sbjct: 1005 VMSGAKHSANGLRLPMQGEVELLCGGPPCQGFSGMNRFNSREYSNFKNSLVASYLSFCDY 1064
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
++PKY ILENV V F K +L+ LL M YQ TF +LQ+GNYGV Q+R R++ILA
Sbjct: 1065 YRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILA 1124
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRV 348
+ PGY LP +P+P H FS + T+ + + S AP R+ T++DA+SDLP++
Sbjct: 1125 AAPGYNLPFYPEPTHVFSRRACTLTTTIDGKRFSTNIHWDESAPKRTCTIQDAMSDLPQI 1184
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
GAN + + P++HFQR++ R +D + LR DHICK ++PL++ RI IP
Sbjct: 1185 CNGANKIEIEYGSMPESHFQRLV----RSNDENSKLR----DHICKNMAPLIQARISRIP 1236
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCTS-KG 457
+ P +DWRDLPNI V L G + +Y+ K+ + VC C S +C+
Sbjct: 1237 TTPGSDWRDLPNISVTLSDGTKCKVLQYRYDDKRNGRSSSGAVRGVCACASGRACSPLDK 1296
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
Q+NT+IPW L HT +R+N+W G+ GRL+W F T
Sbjct: 1297 QENTLIPWCLPHTGNRHNHWAGLYGRLSWGGYFSTT------------------------ 1332
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
VT P P+ KQG++LHP+Q RV++VRE AR+QGFPD+Y+F G + D +
Sbjct: 1333 -------------VTDPEPMGKQGRVLHPDQHRVVSVRECARSQGFPDTYLFAGSVQDKH 1379
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+QIGNAVPPPL A+G EI K +
Sbjct: 1380 RQIGNAVPPPLGAALGREIKKAL 1402
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1313 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1372
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1373 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1432
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1433 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1492
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1493 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1552
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1553 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1604
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1605 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1658
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1659 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1697
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1698 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1757
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1758 LAKAIGLEIKLCM 1770
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/503 (43%), Positives = 298/503 (59%), Gaps = 64/503 (12%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ LD+F+GCGGL EGL ++GVA+ W+VE + A +Y N + C V +DCN +LK
Sbjct: 902 PLRTLDVFAGCGGLSEGLHRSGVAECRWAVENLEAAAHAYSINNKNCIVFNEDCNALLKD 961
Query: 177 LLKGHTQHKG-VSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ G T G + +P + EV+L+ GPPCQGFS +NR E S KN LV ++LSFCD
Sbjct: 962 AMDGATHSAGGLRIPMQGEVELLCGGPPCQGFSGMNRFNSREYSNFKNSLVASYLSFCDF 1021
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
++PKY ILENV V F K +L+ LL M YQ TF +LQ+GNYGV Q+R R++ILA
Sbjct: 1022 YRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILA 1081
Query: 296 SKPGYKLPSFPQPLHAFSNQ----LFTINGNLVANKT---SHAPYRSITVRDAISDLPRV 348
+ PGYKLP +P+P H FS + TI+G AP R+ T++DA+SDLP++
Sbjct: 1082 AAPGYKLPLYPEPTHVFSRRACSLTTTIDGKRFVTNIQWDESAPRRTCTIQDAMSDLPQI 1141
Query: 349 SQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
GAN + P+T+FQR++ R D LR DHICK ++PL++ R+ IP
Sbjct: 1142 CNGANRIEIDYGCMPETYFQRLI----RSRDESAKLR----DHICKNMAPLIQARMSRIP 1193
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCT-SKG 457
+ P +DWRDLPNI V L G + +Y+ K + VC C + C+ +
Sbjct: 1194 TTPGSDWRDLPNISVALSDGTKCKVLQYRYDDIKNGRSTSGALRGVCACSAGGVCSVADK 1253
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
Q+NT+IPW L HTA+R+NNW G+ GR++W
Sbjct: 1254 QENTLIPWCLPHTANRHNNWAGLYGRISW------------------------------- 1282
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
D F T VT P P+ KQG++LHPEQ+RV++VRE AR+QGFPD+Y+F G I D +
Sbjct: 1283 ------DGYFSTTVTDPEPMGKQGRVLHPEQNRVVSVRECARSQGFPDTYLFAGSIQDKH 1336
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+Q+GNAVPPPL A+G EI K +
Sbjct: 1337 RQVGNAVPPPLGAALGREIKKAL 1359
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/506 (43%), Positives = 296/506 (58%), Gaps = 76/506 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EGL QAGVA+ W++E E A +Y N C+V DDCN +LK
Sbjct: 789 LRSLDVFAGCGGLSEGLHQAGVAESLWAIEKEEPAAQAYRLNNPGCTVFTDDCNTLLKLA 848
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G +PQ+ EV+L+ GPPCQGFS +NR E S KN LV ++LS+CD +
Sbjct: 849 MEGEATNSTGQKIPQRGEVELLCGGPPCQGFSGMNRFNTREYSLFKNSLVVSYLSYCDFY 908
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ ILENV V F K+ +L+ CLL+M YQ TF VLQ+G YGV Q+R R +I+A+
Sbjct: 909 RPRFFILENVRNFVSFKKSMVLKLTLRCLLRMGYQCTFGVLQAGCYGVPQTRRRAIIMAA 968
Query: 297 KPGYKLPSFPQPLHAFS-----------NQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
PG +LP +P+P H FS + FT N +T+ APYR+ITVRDA+SDL
Sbjct: 969 APGEELPLYPEPTHCFSPRTCQLTVMVDEKKFTSN----ITRTASAPYRTITVRDAMSDL 1024
Query: 346 PRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
P + GA+ + +HFQR ++ + LL+DHICK +S L+E R+R
Sbjct: 1025 PEIRNGASAAESSYEGEAISHFQRQIRGN--------QYQPLLRDHICKEMSALVEARMR 1076
Query: 404 LIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSC 453
IP P +DWRDLPN ++L G +Y++KL+Y KK+ VC C C
Sbjct: 1077 HIPLAPGSDWRDLPNKEIRLSDG--TYSKKLQYTHHDKKNEKGSSQRLRGVCSCAEGRPC 1134
Query: 454 T-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
+ Q NT+IPW L HT +R+N+W G+ GRL W
Sbjct: 1135 EPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEW-------------------------- 1168
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
D F T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G
Sbjct: 1169 -----------DGYFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGS 1217
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIK 598
I D ++Q+GNAVPPPLA AIG EI K
Sbjct: 1218 ILDKHRQVGNAVPPPLAAAIGREIKK 1243
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 303/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 803 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 862
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 863 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 922
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 923 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 982
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 983 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1042
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ + +L+DHICK +S L+ R+R IP
Sbjct: 1043 NGASALEISYNGEPQSWFQRQLRGA--------QYQPILRDHICKDMSALVAARMRHIPL 1094
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1095 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 1148
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1149 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1187
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1188 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1247
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 1248 LAKAIGLEIKLCM 1260
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/622 (39%), Positives = 346/622 (55%), Gaps = 62/622 (9%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + + D + L+ ++ +D S ++ V++ + E
Sbjct: 1018 IKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEY--GEDLLES 1075
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDT 116
I D D + E Y +K K F P +AR K + P+ P +
Sbjct: 1076 IQDYSQGGPDRFYFLEAY-NSKTKSFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEP 1134
Query: 117 P-------LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1135 EAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1194
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1195 CNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1254
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1255 FLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1314
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD
Sbjct: 1315 RRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDT 1374
Query: 342 ISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS I L+DHICK +S L+
Sbjct: 1375 MSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDHICKDMSALVA 1426
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS-SSCTSKGQ 458
R+R IP P +DWRDLPNI V+L G T KL+Y K+ C + S +
Sbjct: 1427 ARMRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLRYTFHDTKNGCSSTGALRGVCSCAE 1484
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
T P ASR Q NT+IPW L HT +R+N+W G+
Sbjct: 1485 GKTCDP------ASR---------------------QFNTLIPWCLPHTGNRHNHWAGLY 1517
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++
Sbjct: 1518 GRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHR 1577
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPPLAKAIG EI C+
Sbjct: 1578 QVGNAVPPPLAKAIGLEIKLCL 1599
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/622 (39%), Positives = 346/622 (55%), Gaps = 62/622 (9%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + + D + L+ ++ +D S ++ V++ + E
Sbjct: 900 IKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEY--GEDLLES 957
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDT 116
I D D + E Y +K K F P +AR K + P+ P +
Sbjct: 958 IQDYSQGGPDRFYFLEAY-NSKTKSFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEP 1016
Query: 117 P-------LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1017 EAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1076
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1077 CNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1136
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1137 FLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1196
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD
Sbjct: 1197 RRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDT 1256
Query: 342 ISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS I L+DHICK +S L+
Sbjct: 1257 MSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDHICKDMSALVA 1308
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS-SSCTSKGQ 458
R+R IP P +DWRDLPNI V+L G T KL+Y K+ C + S +
Sbjct: 1309 ARMRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLRYTFHDTKNGCSSTGALRGVCSCAE 1366
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
T P ASR Q NT+IPW L HT +R+N+W G+
Sbjct: 1367 GKTCDP------ASR---------------------QFNTLIPWCLPHTGNRHNHWAGLY 1399
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++
Sbjct: 1400 GRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHR 1459
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPPLAKAIG EI C+
Sbjct: 1460 QVGNAVPPPLAKAIGLEIKLCL 1481
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 295/501 (58%), Gaps = 62/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1311
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH-------APYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS + +++ + K APYR+ITVRD++SDLP ++
Sbjct: 1312 APGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITVRDSMSDLPTIN 1371
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA + P++ FQ+ ++ G++ I L DHICK +S L+ R++ IP
Sbjct: 1372 NGAQKLEISYDGEPQSDFQKKIR-GNQYQPI-------LSDHICKDMSSLVAARMKHIPL 1423
Query: 408 FPNADWRDLPNICVKLPRG----QHSYTEKLKYNAKKK----KSVCDCKSSSSCTSKGQK 459
P +DWRDLPNI V L G + YT + K N K + VC C +C +
Sbjct: 1424 APGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRGVCSCAEGDACDPSDR- 1482
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
Q +T+IPW L HT + +NNW G+ G
Sbjct: 1483 -----------------------------------QFSTLIPWCLPHTGNWHNNWAGLYG 1507
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++Q
Sbjct: 1508 RLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQ 1567
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGNAVPPP+A AIG EI C+
Sbjct: 1568 IGNAVPPPMAAAIGMEIKVCL 1588
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 303/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 63 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 122
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 123 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 182
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 183 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 242
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 243 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 302
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ + +L+DHICK +S L+ R+R IP
Sbjct: 303 NGASALEISYNGEPQSWFQRQLRGA--------QYQPILRDHICKDMSALVAARMRHIPL 354
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 355 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 408
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 409 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 447
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 448 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 507
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 508 LAKAIGLEIKLCM 520
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/504 (42%), Positives = 298/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAG+ W++E + A +Y N +V +DCN++L+ +
Sbjct: 973 LKTLDVFAGCGGLSEGLRQAGIIDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLLRKV 1032
Query: 178 LKGHTQ-HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G + + G LPQK EV+L+ GPPCQGFS +NR + S KN LV + LS+CD +
Sbjct: 1033 MNGELRDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSCLSYCDYY 1092
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ I+ENV V F K+ +L+ CL++M YQ TF +LQ+GNYG+ Q+R R++ILA+
Sbjct: 1093 RPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAA 1152
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ +V NK T APYR+I+VRDA+SDLP +
Sbjct: 1153 APGEVLPKYPEPTHVFSKRACQLSV-IVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNI 1211
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + + P +HFQR ++ +L+DHICK ++PL+E RI IP
Sbjct: 1212 RNGWNKEEIAYGDEPISHFQRKIRPKEP--------DAILRDHICKDMAPLVEARIAHIP 1263
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSK 456
+ +DWRDLPNI V+L G +Y++KL+Y KKS VC+C + C
Sbjct: 1264 TASGSDWRDLPNIAVRLSDG--TYSKKLEYTHNDKKSGKSSTGALRGVCNCSAGKICDP- 1320
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
M Q NT+IPW L HT R+N W G
Sbjct: 1321 -----------------------------------MDRQYNTLIPWCLPHTGKRHNQWAG 1345
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
+ GRL WD F T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F G I D
Sbjct: 1346 LYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILDK 1405
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++QIGNAVPPPL A+G EI +C+
Sbjct: 1406 HRQIGNAVPPPLGAALGLEIRQCL 1429
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 303/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 600
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 601 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 660
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 661 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 720
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 721 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 780
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ + +L+DHICK +S L+ R+R IP
Sbjct: 781 NGASALEISYNGEPQSWFQRQLRGA--------QYQPILRDHICKDMSALVAARMRHIPL 832
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 833 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 886
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 887 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 925
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 926 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 985
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 986 LAKAIGLEIKLCM 998
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 295/501 (58%), Gaps = 62/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 980 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1039
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1040 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1099
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1100 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1159
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH-------APYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS + +++ + K APYR+ITVRD++SDLP ++
Sbjct: 1160 APGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITVRDSMSDLPTIN 1219
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA + P++ FQ+ ++ G++ I L DHICK +S L+ R++ IP
Sbjct: 1220 NGAQKLEISYDGEPQSDFQKKIR-GNQYQPI-------LSDHICKDMSSLVAARMKHIPL 1271
Query: 408 FPNADWRDLPNICVKLPRG----QHSYTEKLKYNAKKK----KSVCDCKSSSSCTSKGQK 459
P +DWRDLPNI V L G + YT + K N K + VC C +C +
Sbjct: 1272 APGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRGVCSCAEGDACDPSDR- 1330
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
Q +T+IPW L HT + +NNW G+ G
Sbjct: 1331 -----------------------------------QFSTLIPWCLPHTGNWHNNWAGLYG 1355
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++Q
Sbjct: 1356 RLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQ 1415
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGNAVPPP+A AIG EI C+
Sbjct: 1416 IGNAVPPPMAAAIGMEIKVCL 1436
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/622 (39%), Positives = 346/622 (55%), Gaps = 62/622 (9%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + + D + L+ ++ +D S ++ V++ + E
Sbjct: 1031 IKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEY--GEDLLES 1088
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDT 116
I D D + E Y +K K F P +AR K + P+ P +
Sbjct: 1089 IQDYSQGGPDRFYFLEAY-NSKTKSFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEP 1147
Query: 117 P-------LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1148 EAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1207
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1208 CNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1267
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1268 FLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1327
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD
Sbjct: 1328 RRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDT 1387
Query: 342 ISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS I L+DHICK +S L+
Sbjct: 1388 MSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDHICKDMSALVA 1439
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS-SSCTSKGQ 458
R+R IP P +DWRDLPNI V+L G T KL+Y K+ C + S +
Sbjct: 1440 ARMRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLRYTFHDTKNGCSSTGALRGVCSCAE 1497
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
T P ASR Q NT+IPW L HT +R+N+W G+
Sbjct: 1498 GKTCDP------ASR---------------------QFNTLIPWCLPHTGNRHNHWAGLY 1530
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++
Sbjct: 1531 GRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHR 1590
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPPLAKAIG EI C+
Sbjct: 1591 QVGNAVPPPLAKAIGLEIKLCL 1612
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 304/510 (59%), Gaps = 70/510 (13%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P+ LK LD+F+GCGGL EGL QA +A+ W++E E A +Y N+ +V +DCN+
Sbjct: 1169 PISRKLKTLDVFAGCGGLSEGLHQADIAENLWAIEKEEPAAYAYRLNYPNATVFTEDCNI 1228
Query: 173 VLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+L+ ++ G T G LPQK +V+L+ GPPCQGFS +NR + S KN LV ++LS
Sbjct: 1229 LLQKVMNGDATNEIGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSYLS 1288
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++PK+ I+ENV V F K+ +L+ CL++M YQ TF +LQ+GNYGV Q+R R+
Sbjct: 1289 YCDYYRPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRM 1348
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKT--------SHAPYRSITVRDAIS 343
VILA+ PG LP +P+P H FS + ++ LV NK APYR+ITV+DA+
Sbjct: 1349 VILAAAPGQTLPKYPEPTHVFSKRACQLSV-LVDNKKYSSNCSWIDSAPYRTITVKDAMF 1407
Query: 344 DLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP + G N +++ P +HFQR M+ + +L+DHICK ++PL+E R
Sbjct: 1408 DLPEIKNGWNKEEMPYNSEPLSHFQRKMRGKQ--------YQPVLRDHICKEMAPLVEGR 1459
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSS 451
+ IP +DWRDLPNI ++L G +Y++KL+Y KK+ VC C +
Sbjct: 1460 MAHIPIASGSDWRDLPNITIRLSDG--TYSKKLEYPYDDKKAGKSSTGAYRGVCSCCNGK 1517
Query: 452 SCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1518 PCDPTDRQFNTLIPWCLPHTGNRHNHWSGLYGRLEWD-GF-------------------- 1556
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
F T +T P P+ KQG++LHP + RV++VRE AR+QGFPDS+ F
Sbjct: 1557 ----------------FSTTITNPEPMGKQGRVLHPVETRVVSVRECARSQGFPDSFRFY 1600
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I D ++Q+GNAVPPPL+ AIGYEI KCI
Sbjct: 1601 GSILDKHRQVGNAVPPPLSAAIGYEIRKCI 1630
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 303/493 (61%), Gaps = 45/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 495 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 554
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 555 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 614
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 615 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 674
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 675 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 734
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ + +L+DHICK +S L+ R+R IP
Sbjct: 735 NGASALEISYNGEPQSWFQRQLRGA--------QYQPILRDHICKDMSALVAARMRHIPL 786
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 787 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCVEAGKA 840
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A+R Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 841 CDPAAR---------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 879
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 880 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 939
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI C+
Sbjct: 940 LAKAIGLEIKLCM 952
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/622 (39%), Positives = 346/622 (55%), Gaps = 62/622 (9%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + + D + L+ ++ +D S ++ V++ + E
Sbjct: 1019 IKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEY--GEDLLES 1076
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDT 116
I D D + E Y +K K F P +AR K + P+ P +
Sbjct: 1077 IQDYSQGGPDRFYFLEAY-NSKTKSFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEP 1135
Query: 117 P-------LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1136 EAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1195
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1196 CNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1255
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1256 FLSYCDYYRPRFFLLENVRNSVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1315
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD
Sbjct: 1316 RRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDT 1375
Query: 342 ISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS I L+DHICK +S L+
Sbjct: 1376 MSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDHICKDMSALVA 1427
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS-SSCTSKGQ 458
R+R IP P +DWRDLPNI V+L G T KL+Y K+ C + S +
Sbjct: 1428 ARMRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLRYTFHDTKNGCSSTGALRGVCSCAE 1485
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
T P ASR Q NT+IPW L HT +R+N+W G+
Sbjct: 1486 GKTCDP------ASR---------------------QFNTLIPWCLPHTGNRHNHWAGLY 1518
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++
Sbjct: 1519 GRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHR 1578
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPPLAKAIG EI C+
Sbjct: 1579 QVGNAVPPPLAKAIGLEIKLCL 1600
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 300/493 (60%), Gaps = 46/493 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V DCN+++K +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRFNNPGSTVFTKDCNVLVKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G L QK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLLQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++ YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRRGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEISYNREPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+YN KK+ C
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC---------------------- 1463
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
S + +GV + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1464 ----SSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1519
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1520 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1579
Query: 588 LAKAIGYEIIKCI 600
LAKAIG EI +C+
Sbjct: 1580 LAKAIGLEIKRCM 1592
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/500 (42%), Positives = 300/500 (60%), Gaps = 53/500 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++ K +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLRKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSNQ------------LFTINGNLVANKT--SHAPYRSITVRDAI 342
PG LP FP+P+H + + + + V+N T S P+R+ITVRD +
Sbjct: 1316 APGEPLPLFPEPVHVVAPRXXXXXXXXCPLRVVVDDKKFVSNITRLSSGPFRTITVRDTM 1375
Query: 343 SDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
SDLP + GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+
Sbjct: 1376 SDLPEIRNGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAA 1427
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKN 460
R+R IP P +DWRDLPNI V+L G + KL+YN KK+ C
Sbjct: 1428 RMRHIPLAPGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGC--------------- 1470
Query: 461 TIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGR 520
S + +GV + Q NT+IPW L HT +R+N+W G+ GR
Sbjct: 1471 -----------SSSGALRGVCSCVEGKPCGPAARQFNTLIPWCLPHTGNRHNHWAGLYGR 1519
Query: 521 LAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
L WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+
Sbjct: 1520 LEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQV 1579
Query: 581 GNAVPPPLAKAIGYEIIKCI 600
GNAVPPPLAKAIG EI +C+
Sbjct: 1580 GNAVPPPLAKAIGLEIKRCM 1599
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 300/494 (60%), Gaps = 48/494 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAG+ W++E + A +Y N +V +DCN++L +
Sbjct: 968 LKTLDVFAGCGGLSEGLRQAGIVDNQWAIERDEPAACAYRLNNPNTTVFCEDCNVLLSKV 1027
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+KG + G LPQK EV+L+ GPPCQGFS +NR + S KN LV + LS+CD +
Sbjct: 1028 MKGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVASCLSYCDYY 1087
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ I+ENV V F ++ +L+ CL++M YQ TF +LQ+GNYG+ Q+R R++ILA+
Sbjct: 1088 RPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAA 1147
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKT--------SHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ +V NK APYR+I+VRDA+SDLP +
Sbjct: 1148 APGEVLPKYPEPTHVFSKRACQLSV-IVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNI 1206
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + + P +HFQR ++ +L+DHICK ++PL+E RI IP
Sbjct: 1207 RNGWNTEEMAYSDEPISHFQRKVRPKEP--------DAILRDHICKDMAPLVEARIAHIP 1258
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWS 466
+ +DWRDLPNI V+L G +Y++KL+Y KK+ KSS+
Sbjct: 1259 TASGSDWRDLPNIAVRLSDG--TYSKKLEYLYHDKKA---GKSSTGAH------------ 1301
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
+GV A M Q NT+IPW L HT R+N+W G+ GRL WD
Sbjct: 1302 -----------RGVCSCCAGKMCDPMARQYNTLIPWCLPHTGRRHNHWAGLYGRLEWDGF 1350
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
F T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPD++ F G I D ++QIGNAVPP
Sbjct: 1351 FGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDTFRFYGNILDKHRQIGNAVPP 1410
Query: 587 PLAKAIGYEIIKCI 600
PL A+G+EI KC+
Sbjct: 1411 PLGAALGFEIRKCL 1424
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/504 (43%), Positives = 310/504 (61%), Gaps = 45/504 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+ + W++E+ A ++ N +V +DCN++LK +
Sbjct: 1135 LRTLDVFSGCGGLSEGFHQAGICETLWAIEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLV 1194
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G ++ LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1195 MGGKVVNELQQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1254
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1255 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1314
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T AP+R+ITVRD +SDLP +
Sbjct: 1315 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLGSAPFRTITVRDTMSDLPEIR 1374
Query: 350 QGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS + + ++DHICK +SPL+ R+R IP
Sbjct: 1375 NGASAPEIAYNGEPQSWFQRQLR-GS-------HYQPTVRDHICKDMSPLVAARMRHIPL 1426
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V L G + +KL+Y+ + KK+ C+S G + S
Sbjct: 1427 APGSDWRDLPNIEVPLSDG--TVAKKLRYSYQDKKN--------GCSSSGALRGVC--SC 1474
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
A + + M Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1475 AEGAGKACD--------------TMARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1520
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1521 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPP 1580
Query: 588 LAKAIGYEIIKC-IGNAVPPPLAK 610
LAKAIG EI C + A P AK
Sbjct: 1581 LAKAIGLEIKLCMLAKAREAPSAK 1604
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 303/504 (60%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1037 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1096
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1097 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1156
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1157 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1216
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T + AP+R+ITVRD +SDLP +
Sbjct: 1217 APGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIR 1276
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1277 NGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAGRMRHIPL 1328
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPNI V+L G + T KL+Y +KK+ VC C C +
Sbjct: 1329 APGSDWRDLPNIEVRLSDG--TTTRKLRYTHHEKKNGRSNTGALRGVCSCAEGKPCDPAD 1386
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1387 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1419
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D
Sbjct: 1420 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1469
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1470 HRQVGNAVPPPLAKAIGLEIKLCV 1493
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/507 (42%), Positives = 301/507 (59%), Gaps = 70/507 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAGVA+ W++E E S A +Y N +V +DCN++LK +
Sbjct: 895 LKTLDVFAGCGGLSEGLHQAGVAENLWAIEKEESAAYAYRLNNPNATVFIEDCNVLLKKV 954
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T ++ G LPQK +V+L+ GPPCQGFS +NR + S KN LV ++LS+CD +
Sbjct: 955 MNGETTNEIGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSYLSYCDYY 1014
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P + I+ENV V F ++ +L+ CL++M YQ TF +LQ+GNYG+ Q+R R++ILA+
Sbjct: 1015 RPNFFIMENVRNFVSFKRSMVLKLTLRCLIRMGYQCTFGILQAGNYGIPQTRRRMIILAA 1074
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ LV NK AP+R+I+V+DA+ DLP +
Sbjct: 1075 APGQMLPKYPEPSHVFSKRACQLSV-LVDNKKYSSNCNWIDSAPFRTISVKDAMFDLPEI 1133
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + N P THFQR M+ + LL+DHICK ++PL+E R+ IP
Sbjct: 1134 KNGWNKEEMSYTNEPTTHFQRKMRGKQ--------YQPLLRDHICKEMTPLVEARMAHIP 1185
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-S 455
+DWRDLPNI V+L G +Y ++L+Y KK+ VC C + SC +
Sbjct: 1186 IASGSDWRDLPNIAVRLSDG--TYCKQLEYTHDDKKAGRSSVGAYRGVCCCCTGKSCDPT 1243
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HT +R+N+W G+ GRL W
Sbjct: 1244 DRQFNTLIPWCLPHTGNRHNHWAGLYGRLEW----------------------------- 1274
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
+ F T +T P P+ KQG++LHP Q RV++VRE AR+QGFPDS+ F G I D
Sbjct: 1275 --------NGYFSTTITNPEPMGKQGRVLHPVQTRVVSVRECARSQGFPDSFRFYGTILD 1326
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIGN 602
++QIGNAVPPPL AIG+EI CI N
Sbjct: 1327 KHRQIGNAVPPPLGVAIGHEIRNCIQN 1353
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/495 (43%), Positives = 300/495 (60%), Gaps = 50/495 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EG QAG+ + W++E++ A ++ N +V DDCNL+L +
Sbjct: 1101 LKSLDVFAGCGGLSEGFHQAGLCESNWAIEIDEPAAQAFRLNNPGSTVFTDDCNLLLSLV 1160
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T +G LPQ+ EV+++ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1161 MEGEKTNGRGQKLPQRGEVEVLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1220
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V + KN +L+ CL++M YQ TF VLQ+G+YGV Q+R R +ILA+
Sbjct: 1221 RPKFFLLENVRNFVSYKKNMVLKLALRCLVRMGYQCTFGVLQAGHYGVPQTRRRAIILAA 1280
Query: 297 KPGYKLPSFPQPLHAFSNQL---------FTINGNLVANKTSHAPYRSITVRDAISDLPR 347
PG KLP +P+P H F+ + IN N+ + APYR+ITVR A+SDLP
Sbjct: 1281 APGQKLPFYPEPNHVFAPRACQLSVLVDERKINSNI--SWLESAPYRTITVRAAMSDLPE 1338
Query: 348 VSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
+ G + P++ FQR ++ G++ I L+DHICK +S L+ R+R I
Sbjct: 1339 IHNGHQKLEISYDGEPQSAFQRKIR-GNQYQPI-------LRDHICKEMSQLVATRMRHI 1390
Query: 406 PSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPW 465
P P +DWRDLPNI + LP G + KL+Y K KK
Sbjct: 1391 PLAPGSDWRDLPNIQITLPDG--NICRKLRYTHKDKK----------------------- 1425
Query: 466 SLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
+ S N + +GV ++ Q NT+IPW L HT +R+N+W G+ GRL WD
Sbjct: 1426 ---NGYSSNGSLRGVCSCAEGEKCDTAYRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDG 1482
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I + ++Q+GNAVP
Sbjct: 1483 FFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGTILEKHRQVGNAVP 1542
Query: 586 PPLAKAIGYEIIKCI 600
PPL+ AIG EI KC+
Sbjct: 1543 PPLSAAIGREIKKCV 1557
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/523 (42%), Positives = 308/523 (58%), Gaps = 69/523 (13%)
Query: 111 PMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P L P + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1017 PQALKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1076
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1077 CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1136
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
+LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1137 YLSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1196
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP +P+PLH F+ + ++ V+N T + YR+ITVRD
Sbjct: 1197 RRAIILAAAPGEKLPRYPEPLHVFAPRACSLTVAVDEKKYVSNVTRGNGGIYRTITVRDT 1256
Query: 342 ISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA ++ P++ FQR ++ GS+ I L+DHICK +S L+E
Sbjct: 1257 MSDLPEIRNGAASLEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVE 1308
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKS 449
R+R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C
Sbjct: 1309 ARMRHIPLAPGSDWRDLPNIEVRLKDG--TTTKKLRYTHHDKKNGRSSTGALRGVCTCAG 1366
Query: 450 SSSCTSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTA 508
+C S ++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1367 GKTCDSADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------------------ 1407
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
F T VT P P+ KQG++LH EQ RV++VRE AR+QGFPD+Y
Sbjct: 1408 ------------------FSTTVTNPEPMGKQGRVLHAEQHRVVSVRECARSQGFPDTYR 1449
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAKA 611
F G I D ++Q+GNAVPPPL++AIG EI KC+ + + A A
Sbjct: 1450 FFGNILDKHRQVGNAVPPPLSRAIGLEIKKCVSDRMKEEQAAA 1492
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/519 (42%), Positives = 304/519 (58%), Gaps = 68/519 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QA V++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1076 LRSLDVFSGCGGLSEGFHQAEVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1135
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1136 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1195
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R ++LA+
Sbjct: 1196 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAA 1255
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVAN--KTSHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N +T P+R+ITVRD +SDLP +
Sbjct: 1256 APGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIR 1315
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1316 NGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1367
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPNI V+L G T KL+Y +KK+ VC C +C +
Sbjct: 1368 APGSDWRDLPNIEVRLSDG--ITTRKLRYTHHEKKNGRSSTGALRGVCSCAEGKACDPAD 1425
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1426 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1458
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G + D
Sbjct: 1459 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNVLDK 1508
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAKAIGYE 615
++Q+GNAVPPPLAKAIG EI C+ + I E
Sbjct: 1509 HRQVGNAVPPPLAKAIGLEIKSCVSAKIKEGATDTIKRE 1547
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1149 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1208
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1209 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1268
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1269 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1328
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1329 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1388
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1389 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1440
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1441 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1498
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1499 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1531
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1532 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1581
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1582 HRQVGNAVPPPLAKAIGLEIKLCL 1605
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1201 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1260
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1261 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1320
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1321 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1380
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1381 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1432
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y K+ VC C +C +
Sbjct: 1433 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1490
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1491 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1523
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1524 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1573
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1574 HRQVGNAVPPPLAKAIGLEIKLCL 1597
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1160 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1219
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1220 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1279
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1280 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1339
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1340 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1399
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1400 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1451
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1452 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1509
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1510 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1542
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1543 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1592
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1593 HRQVGNAVPPPLAKAIGLEIKLCL 1616
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1201
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1202 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1261
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1262 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1321
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1322 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1381
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1382 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1433
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1434 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1491
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1492 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1524
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1525 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1574
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1575 HRQVGNAVPPPLAKAIGLEIKLCL 1598
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1205 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1264
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1265 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1324
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1325 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1384
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1385 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1444
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1445 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1496
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1497 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1554
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1555 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1587
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1588 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1637
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1638 HRQVGNAVPPPLAKAIGLEIKLCL 1661
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1201 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1260
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1261 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1320
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1321 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1380
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1381 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1432
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1433 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1490
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1491 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1523
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1524 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1573
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1574 HRQVGNAVPPPLAKAIGLEIKLCL 1597
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1083
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1084 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1143
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1144 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1203
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1204 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1263
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1264 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1315
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y K+ VC C +C +
Sbjct: 1316 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1373
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1374 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1406
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1407 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1456
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1457 HRQVGNAVPPPLAKAIGLEIKLCL 1480
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/502 (41%), Positives = 304/502 (60%), Gaps = 64/502 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+A+P +++EL A +Y N +V +DCN++L+ +
Sbjct: 843 LRSLDVFSGCGGLSEGFHQAGIAEPSYAIELWEPAAQAYRLNNPGATVFTEDCNVLLEMV 902
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G + K G LPQK +V+L+ GPPCQGFS +NR E S+ KN LV ++LS+CD +
Sbjct: 903 MNGEERSKCGQRLPQKGDVELLCGGPPCQGFSGMNRFNSREYSRFKNSLVVSYLSYCDYY 962
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F +L+ LL+M YQ TF VLQ+G+YGV+Q+R R +ILA+
Sbjct: 963 RPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRRAIILAA 1022
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK-------TSHAPYRSITVRDAISDLPRVS 349
PG +LP +P+PLH FS + +++ + + ++ APYR+ITV DA+SDLP++
Sbjct: 1023 APGEQLPLYPEPLHTFSTRGGSLSAQVGDTRYTNNIKWSTSAPYRTITVHDAMSDLPKIP 1082
Query: 350 QG-ANCYL-FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
G A + + P THFQRMM+ + + +++DHICK +SPL+ R+ LIP
Sbjct: 1083 NGHAKLEMPYTGEPLTHFQRMMRGK--------DYQGVVRDHICKDMSPLVAARMALIPL 1134
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCTSKGQK 459
P +DWRDLPN KL G + + +Y+ KK+ + VC C +C + ++
Sbjct: 1135 IPGSDWRDLPNKPHKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGVCSCAEGRACDAMDRQ 1194
Query: 460 -NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
NT+IPW L HT +R+NNW G+ GRL WD F
Sbjct: 1195 FNTLIPWCLPHTGNRHNNWAGLYGRLCWD-GF---------------------------- 1225
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
F T VT P P+ KQG++LHP+Q RV++VRE AR+QGFPDSY F G I D ++
Sbjct: 1226 --------FSTTVTNPEPMGKQGRVLHPQQHRVVSVRECARSQGFPDSYRFFGSILDKHR 1277
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
++GNAVPPP++KAIG +I K +
Sbjct: 1278 EVGNAVPPPMSKAIGLQIKKSL 1299
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1167 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1226
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1227 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1286
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1287 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1346
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1347 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1406
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1407 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1458
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1459 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1516
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1517 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1549
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1550 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1599
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1600 HRQVGNAVPPPLAKAIGLEIKLCL 1623
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 303/511 (59%), Gaps = 68/511 (13%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC 170
P P + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DC
Sbjct: 1020 PKPKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1079
Query: 171 NLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++
Sbjct: 1080 NVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSY 1139
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1140 LSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1199
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAI 342
R +ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +
Sbjct: 1200 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTRGNGGIYRTITVRDTM 1259
Query: 343 SDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
SDLP + GA ++ P++ FQR ++ G++ I L+DHICK +S L+E
Sbjct: 1260 SDLPEIRNGAAALEISYNGEPQSWFQRQIR-GTQYQPI-------LRDHICKDMSALVEG 1311
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSS 450
R+R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C
Sbjct: 1312 RMRYIPLAPGSDWRDLPNIEVRLKDG--TLTKKLRYTHHDKKNGRSGTGALRGVCTCAGG 1369
Query: 451 SSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS 509
C S Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1370 KPCDPSDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------------------- 1409
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F
Sbjct: 1410 -----------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1452
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I D ++Q+GNAVPPPL++AIG EI +CI
Sbjct: 1453 FGNILDKHRQVGNAVPPPLSRAIGLEIKRCI 1483
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 301/500 (60%), Gaps = 68/500 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1009 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1068
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1069 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1128
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1129 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1188
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T + AP+R+ITVRD +SDLP +
Sbjct: 1189 APGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIR 1248
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1249 NGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAGRMRHIPL 1300
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPNI V+L G + T KL+Y +KK+ VC C C +
Sbjct: 1301 APGSDWRDLPNIEVRLSDG--TTTRKLRYTHHEKKNGRSNTGALRGVCSCAEGKPCDPAD 1358
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1359 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1391
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D
Sbjct: 1392 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1441
Query: 577 YKQIGNAVPPPLAKAIGYEI 596
++Q+GNAVPPPLAKAIG EI
Sbjct: 1442 HRQVGNAVPPPLAKAIGLEI 1461
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/502 (42%), Positives = 297/502 (59%), Gaps = 64/502 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A ++ N +V DDCN +L+ +
Sbjct: 1137 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELLRLV 1196
Query: 178 LKG-HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1197 MQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1256
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1257 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1316
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS + +++ + K APYR+I+VRD++SDLP +S
Sbjct: 1317 APGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTISVRDSMSDLPTIS 1376
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA + P++ FQ+ ++ G++ I L+DH+CK +S L+ R++ IP
Sbjct: 1377 NGAQKLEISYDGEPQSDFQKKIR-GNQYQPI-------LRDHMCKDMSALVAARMKHIPL 1428
Query: 408 FPNADWRDLPNICVKLPRG--------QHSYTEKLKYNAKKKKSVCDCKSSSSCT-SKGQ 458
P +DWRDLPNI V L G H T+ K + K VC C +C S Q
Sbjct: 1429 APGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKGVCSCAEGEACDPSDRQ 1488
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
+T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1489 FSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------------- 1519
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++
Sbjct: 1520 --------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHR 1571
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
QIGNAVPPP+A AIG EI +C+
Sbjct: 1572 QIGNAVPPPMAAAIGMEIKQCL 1593
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1185
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1186 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1245
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1246 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1305
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1306 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1365
Query: 350 QGA-NCYL-FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + ++ P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1366 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1417
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y K+ VC C +C +
Sbjct: 1418 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1475
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1476 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1508
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1509 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1558
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1559 HRQVGNAVPPPLAKAIGLEIKLCL 1582
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1082
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1083 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1142
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1143 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1202
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1203 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1262
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1263 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1314
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1315 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1372
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1373 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1405
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1406 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1455
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1456 HRQVGNAVPPPLAKAIGLEIKLCL 1479
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1141 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1201 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1260
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1261 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1320
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1321 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1380
Query: 350 QGA-NCYL-FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + ++ P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1381 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1432
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 1433 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1490
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1491 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1523
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1524 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1573
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1574 HRQVGNAVPPPLAKAIGLEIKLCL 1597
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/504 (42%), Positives = 304/504 (60%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1075
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS+CD +
Sbjct: 1076 MSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1135
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PKY +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R ++LA+
Sbjct: 1136 RPKYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAA 1195
Query: 297 KPGYKLPSFPQPLHAFSNQLFTIN-----GNLVAN--KTSHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ + +++ V+N +T+ + +R+ITVRD +SDLP +
Sbjct: 1196 APGEKLPMFPEPLHVFAPRACSLSVVVDEKKYVSNITRTNSSLFRTITVRDTMSDLPEIR 1255
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DH+CK +S L+ R+R IP
Sbjct: 1256 NGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHVCKDMSALVAARMRHIPL 1307
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPN+ V+L G + T KL+Y+ KK+ VC C C +
Sbjct: 1308 APGSDWRDLPNMEVRLSDG--TTTRKLRYSHHDKKNGRSSTGALRGVCSCSEGKPCDPAD 1365
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1366 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1398
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D
Sbjct: 1399 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1448
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPL+KAIG EI KC+
Sbjct: 1449 HRQVGNAVPPPLSKAIGSEIKKCV 1472
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/503 (42%), Positives = 304/503 (60%), Gaps = 65/503 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAGV++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1143 LRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1202
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1203 MAGEATNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1262
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1263 RPRFFLLENVRNFVSFKRSMVLKLTLCCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1322
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1323 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1382
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1383 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1434
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDC-KSSSSCTSKGQ 458
P +DWRDLPNI V+L G + + Y+ ++ + VC C ++ +C +
Sbjct: 1435 APGSDWRDLPNIEVRLSDGTMARKLRYTYHDRRNGRSSSGALRGVCSCVEAGKACDPVAR 1494
Query: 459 K-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
+ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1495 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------------------------- 1526
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D +
Sbjct: 1527 ---------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKH 1577
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+Q+GNAVPPPLAKAIG EI C+
Sbjct: 1578 RQVGNAVPPPLAKAIGLEIKLCM 1600
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/502 (42%), Positives = 297/502 (59%), Gaps = 64/502 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A ++ N +V DDCN +L+ +
Sbjct: 1137 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNELLRLV 1196
Query: 178 LKG-HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1197 MQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1256
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1257 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1316
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS + +++ + K APYR+I+VRD++SDLP +S
Sbjct: 1317 APGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTISVRDSMSDLPTIS 1376
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA + P++ FQ+ ++ G++ I L+DH+CK +S L+ R++ IP
Sbjct: 1377 NGAQKLEISYDGEPQSDFQKKIR-GNQYQPI-------LRDHMCKDMSALVAARMKHIPL 1428
Query: 408 FPNADWRDLPNICVKLPRG--------QHSYTEKLKYNAKKKKSVCDCKSSSSCT-SKGQ 458
P +DWRDLPNI V L G H T+ K + K VC C +C S Q
Sbjct: 1429 APGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKGVCSCAEGEACDPSDRQ 1488
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
+T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1489 FSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------------- 1519
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++
Sbjct: 1520 --------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHR 1571
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPPP+A AIG EI +C+
Sbjct: 1572 QVGNAVPPPMAAAIGMEIKQCL 1593
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/504 (42%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1082
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS+CD +
Sbjct: 1083 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1142
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1143 RPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1202
Query: 297 KPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +SDLP +
Sbjct: 1203 APGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIR 1262
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1263 NGAAALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1314
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPNI V+L G + T+KL+Y KK+ VC C C +
Sbjct: 1315 APGSDWRDLPNIEVRLRDG--TTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPAD 1372
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1373 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1405
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G + D
Sbjct: 1406 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1455
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPL+KAIG E+ KC+
Sbjct: 1456 HRQVGNAVPPPLSKAIGLEVKKCV 1479
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 852 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 911
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 912 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 971
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 972 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1031
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1032 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1091
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 1092 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 1143
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y K+ VC C +C +
Sbjct: 1144 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1201
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1202 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1234
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1235 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1284
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1285 HRQVGNAVPPPLAKAIGLEIKLCL 1308
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/504 (42%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1023 LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1082
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS+CD +
Sbjct: 1083 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1142
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1143 RPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1202
Query: 297 KPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +SDLP +
Sbjct: 1203 APGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIR 1262
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1263 NGAAALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1314
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
P +DWRDLPNI V+L G + T+KL+Y KK+ VC C C +
Sbjct: 1315 APGSDWRDLPNIEVRLRDG--TTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPAD 1372
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1373 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1405
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G + D
Sbjct: 1406 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1455
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPL+KAIG E+ KC+
Sbjct: 1456 HRQVGNAVPPPLSKAIGLEVKKCV 1479
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/510 (42%), Positives = 304/510 (59%), Gaps = 68/510 (13%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
MP + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN
Sbjct: 1009 MPKVPKYRTLDVFSGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGATVFTEDCN 1068
Query: 172 LVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S KN LV ++L
Sbjct: 1069 ILLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSAFKNSLVVSYL 1128
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
S+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G YGVAQ+R R
Sbjct: 1129 SYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1188
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAIS 343
+ILA+ PG +LP +P+PLH F+ + ++N V+N T + YR+ITVRD +S
Sbjct: 1189 AIILAAAPGEELPRYPEPLHVFAPRACSLNVVVDDKKFVSNVTRGNGGIYRTITVRDTMS 1248
Query: 344 DLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP + GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+E R
Sbjct: 1249 DLPEIRNGASALEISYNGEPQSWFQRQIR-GTQYQPI-------LRDHICKDMSALVEGR 1300
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSS 451
+R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C +
Sbjct: 1301 MRHIPLAPGSDWRDLPNIEVRLRDG--TMTKKLRYTHLDKKNGRSSTGALRGVCTCAGGT 1358
Query: 452 SCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1359 PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------- 1397
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F
Sbjct: 1398 ----------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFF 1441
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I D ++Q+GNAVPPPL++AIG EI KC+
Sbjct: 1442 GNILDKHRQVGNAVPPPLSRAIGLEIKKCV 1471
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 298/505 (59%), Gaps = 70/505 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAG+ W++E + A +Y N +V +DCN++L+ +
Sbjct: 969 LKTLDVFAGCGGLSEGLRQAGIVDNQWAIERDEPAACAYRLNNPNTTVFCEDCNVLLRKV 1028
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+KG + G LPQK EV+L+ GPPCQGFS +NR + S KN LV + LS+CD +
Sbjct: 1029 MKGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSCLSYCDYY 1088
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ I+ENV V F ++ +L+ CLL+M YQ TF +LQ+GNYG+ Q+R R++ILA+
Sbjct: 1089 RPKFFIMENVRNFVSFKRSMVLKLTLRCLLRMGYQCTFGILQAGNYGIPQTRRRLIILAA 1148
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ +V NK APYR+I+VRDA+SDLP +
Sbjct: 1149 APGEVLPKYPEPTHVFSKRACQLSV-IVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNI 1207
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + + P +HFQR ++ +L+DHICK ++PL+E RI IP
Sbjct: 1208 RNGWNTEEMAYSDEPISHFQRKVRPKEP--------DAILRDHICKDMAPLVEARIAHIP 1259
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSK 456
+ +DWRDLPNI V+L G +Y++KL+Y KK+ VC C + C
Sbjct: 1260 TASGSDWRDLPNIAVRLSDG--TYSKKLEYLYHDKKAGKSSIGAHRGVCSCCAGKMCDPI 1317
Query: 457 G-QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HT R+N+W G+ GRL WD
Sbjct: 1318 ARQYNTLIPWCLPHTGRRHNHWAGLYGRLEWD---------------------------- 1349
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G G T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F G I D
Sbjct: 1350 GFFG---------TTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILD 1400
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCI 600
++QIGNAVPPPL A+G+EI KC+
Sbjct: 1401 KHRQIGNAVPPPLGAALGFEIRKCL 1425
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 301/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 413 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 472
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 473 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 532
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 533 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 592
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 593 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 652
Query: 350 QGA-NCYL-FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + ++ P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 653 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 704
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y K+ VC C +C +
Sbjct: 705 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 762
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL W
Sbjct: 763 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEW------------------------------ 792
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 793 -------DGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 845
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 846 HRQVGNAVPPPLAKAIGLEIKLCL 869
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/501 (42%), Positives = 294/501 (58%), Gaps = 64/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EG Q+GVA+ W++E E A ++ N C+V DDCN +L+ +
Sbjct: 824 LRSLDVFAGCGGLSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLRLV 883
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + G LPQK +V+L+ GPPCQGFS +NR E SK KN LV ++LS+CD +
Sbjct: 884 MDGETTNSVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSREYSKFKNSLVVSYLSYCDYY 943
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V F K+ +L+ LL M YQ TF V+Q+G YGVAQ+R R +ILA+
Sbjct: 944 RPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAA 1003
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG KLP +P+P H FS + ++ + K APYR+ITVRDA+SDLP +
Sbjct: 1004 APGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESNMARVWSAPYRTITVRDALSDLPEIR 1063
Query: 350 QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
G +N + + R ++G + + +L+DHICK +S L+E R+R IP P
Sbjct: 1064 NG------YNKLEMSYDREAQNGYQKAIRGSQHQPILRDHICKEMSALVEGRMRHIPLAP 1117
Query: 410 NADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SKGQ 458
+DWRDLPNI V+L G + +KL+Y KK+ VC C + C + Q
Sbjct: 1118 GSDWRDLPNIAVRLSDG--NTCKKLRYLHPDKKNGKGPNGQLRGVCACAMNKPCDPTDRQ 1175
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
NT+IPW L HT +R+NNW G+ GR+ W
Sbjct: 1176 FNTLIPWCLPHTGNRHNNWAGLYGRVEW-------------------------------- 1203
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++
Sbjct: 1204 -----DGYFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTILDKHR 1258
Query: 579 QIGNAVPPPLAKAIGYEIIKC 599
Q+GNAVPPPLAK +G EI KC
Sbjct: 1259 QVGNAVPPPLAKHLGLEIKKC 1279
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1201
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1202 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1261
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1262 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1321
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1322 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1381
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+ IP
Sbjct: 1382 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMPHIPL 1433
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G +KL+Y + + VC C +C +
Sbjct: 1434 FPGSDWRDLPNIQVRL--GDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1491
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1492 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1524
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1525 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1574
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1575 HRQVGNAVPPPLAKAIGLEIKLCL 1598
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 303/508 (59%), Gaps = 72/508 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1155 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1214
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1215 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1274
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1275 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1334
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1335 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1394
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1395 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1446
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDC----KSSSSC 453
P +DWRDLPNI V+L G + KL+Y +K+ VC C S +C
Sbjct: 1447 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGASGKAC 1504
Query: 454 TSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1505 DPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------- 1541
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G
Sbjct: 1542 --------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGN 1587
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1588 ILDKHRQVGNAVPPPLAKAIGLEIKLCM 1615
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 298/507 (58%), Gaps = 70/507 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL QAG+ W++E + A +Y N +V +DCN++L+ +
Sbjct: 956 LKTLDVFAGCGGLSEGLRQAGIVDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLLRKV 1015
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G + G LPQK EV+L+ GPPCQGFS +NR + S KN LV + LS+CD +
Sbjct: 1016 MNGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSCLSYCDYY 1075
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ I+ENV V F ++ +L+ CL++M YQ TF +LQ+GNYG+ Q+R R++ILA+
Sbjct: 1076 RPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAA 1135
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLPRV 348
PG LP +P+P H FS + ++ +V NK T APYR+I+VRDA+SDLP +
Sbjct: 1136 APGEVLPKYPEPTHVFSKRACQLSV-IVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNI 1194
Query: 349 SQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G N + + P +HFQR ++ +L+DHICK ++PL+E RI IP
Sbjct: 1195 RNGWNNEEIAYSDEPISHFQRKVRPKEP--------DAILRDHICKDMAPLVEARIAHIP 1246
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSK 456
+ +DWRDLPNI V+L G +Y++KL+Y KK+ VC C C
Sbjct: 1247 TASGSDWRDLPNITVRLSDG--TYSKKLEYMYHDKKAGKSSTGALRGVCSCCMGKMCDPI 1304
Query: 457 G-QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HT R+N+W G+ GRL WD
Sbjct: 1305 ARQYNTLIPWCLPHTGKRHNHWAGLYGRLEWD---------------------------- 1336
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G G T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F G I D
Sbjct: 1337 GFFG---------TTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILD 1387
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIGN 602
++QIGNAVPPPL A+G+EI KC+ N
Sbjct: 1388 KHRQIGNAVPPPLGAALGFEIRKCLKN 1414
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 303/508 (59%), Gaps = 72/508 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1126 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1185
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1186 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1245
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1246 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1305
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1306 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1365
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1366 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1417
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDC----KSSSSC 453
P +DWRDLPNI V+L G + KL+Y +K+ VC C S +C
Sbjct: 1418 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKAC 1475
Query: 454 TSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1476 DPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------- 1512
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G
Sbjct: 1513 --------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGN 1558
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1559 ILDKHRQVGNAVPPPLAKAIGLEIKLCM 1586
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 302/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1024 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1083
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1084 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1143
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1144 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1203
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1204 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 1263
Query: 350 QGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + +N P + FQR ++ GS I L+DHICK +SPL+ R+ IP
Sbjct: 1264 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMPHIPL 1315
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G +KL+Y + + VC C +C +
Sbjct: 1316 FPGSDWRDLPNIQVRL--GDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 1373
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1374 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------------- 1406
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 1407 ----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1456
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1457 HRQVGNAVPPPLAKAIGLEIKLCL 1480
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/504 (43%), Positives = 301/504 (59%), Gaps = 68/504 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 494 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 553
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 554 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 613
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 614 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 673
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 674 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQ 733
Query: 350 QGA-NCYL-FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA N + ++ P + FQR ++ GS I L+DHICK +SPL+ R+R IP
Sbjct: 734 NGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMSPLVAARMRHIPL 785
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKY----------NAKKKKSVCDCKSSSSCTSKG 457
FP +DWRDLPNI V+L G KL+Y + + VC C +C +
Sbjct: 786 FPGSDWRDLPNIQVRL--GDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPES 843
Query: 458 QK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
++ +T+IPW L HT +R+N+W G+ GRL W
Sbjct: 844 RQFSTLIPWCLPHTGNRHNHWAGLYGRLEW------------------------------ 873
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPDSY F G I D
Sbjct: 874 -------DGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 926
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 927 HRQVGNAVPPPLAKAIGLEIKLCL 950
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 303/508 (59%), Gaps = 72/508 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1018 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1077
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1078 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1137
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1138 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1197
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1198 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1257
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1258 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1309
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDC----KSSSSC 453
P +DWRDLPNI V+L G + KL+Y +K+ VC C S +C
Sbjct: 1310 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKAC 1367
Query: 454 TSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1368 DPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------- 1404
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G
Sbjct: 1405 --------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGN 1450
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1451 ILDKHRQVGNAVPPPLAKAIGLEIKLCM 1478
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 302/508 (59%), Gaps = 72/508 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHT-QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDC----KSSSSC 453
P +DWRDLPNI V+L G + KL+Y +K+ VC C S +C
Sbjct: 1431 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGASGKAC 1488
Query: 454 TSKGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1489 DPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------------------- 1525
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G
Sbjct: 1526 --------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGN 1571
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1572 ILDKHRQVGNAVPPPLAKAIGLEIKLCM 1599
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 308/521 (59%), Gaps = 76/521 (14%)
Query: 101 IHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF 160
++S + LPK L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N
Sbjct: 1005 LNSGDKLPK--------LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNN 1056
Query: 161 QECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKS 219
+V +DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S
Sbjct: 1057 PGTTVFTEDCNILLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYS 1116
Query: 220 KLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQS 279
K KN LV ++LS+CD ++PKY +LENV V F K+ +L+ CL++M YQ TF VLQ+
Sbjct: 1117 KFKNSLVVSYLSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQA 1176
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVAN--KTSHAP 332
G YGVAQ+R R ++LA+ PG KLP FP+PLH F+ + T++ V+N +T+ +
Sbjct: 1177 GQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTRTNSSL 1236
Query: 333 YRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD +SDLP + GA+ ++ P++ FQR ++ GS+ I L+DH+
Sbjct: 1237 FRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHV 1288
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS------- 443
CK +S L+ R+R IP P +DWRDLPN+ V+L G S KL+Y KK+
Sbjct: 1289 CKDMSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTS--RKLRYTHHDKKNGRSGTGA 1346
Query: 444 ---VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTI 499
VC C C + Q T+IPW L HT +R+N+W G+ GRL WD SF
Sbjct: 1347 LRGVCCCSEGKQCDPADRQFGTLIPWCLPHTGNRHNHWAGLYGRLEWD-SF--------- 1396
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
F T VT P P+ KQG++LHPEQ RV++VRE AR
Sbjct: 1397 ---------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECAR 1429
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+QGFPD+Y G I D ++Q+GNAVPPPL++AIG EI C+
Sbjct: 1430 SQGFPDTYRLFGNILDKHRQVGNAVPPPLSRAIGLEIKSCV 1470
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/501 (42%), Positives = 294/501 (58%), Gaps = 64/501 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EG Q+GVA+ W++E E A ++ N C+V DDCN +L+ +
Sbjct: 350 LRSLDVFAGCGGLSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLRLV 409
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + G LPQK +V+L+ GPPCQGFS +NR E SK KN LV ++LS+CD +
Sbjct: 410 MDGETTNSVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSREYSKFKNSLVVSYLSYCDYY 469
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V F K+ +L+ LL M YQ TF V+Q+G YGVAQ+R R +ILA+
Sbjct: 470 RPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAA 529
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG KLP +P+P H FS + ++ + K APYR+ITVRDA+SDLP +
Sbjct: 530 APGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESNMARVWSAPYRTITVRDALSDLPEIR 589
Query: 350 QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
G +N + + R ++G + + +L+DHICK +S L+E R+R IP P
Sbjct: 590 NG------YNKLEMSYDREAQNGYQKAIRGSQHQPILRDHICKEMSALVEGRMRHIPLAP 643
Query: 410 NADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SKGQ 458
+DWRDLPNI V+L G + +KL+Y KK+ VC C + C + Q
Sbjct: 644 GSDWRDLPNIAVRLSDG--NTCKKLRYLHPDKKNGKGPNGQLRGVCACAMNKPCDPTDRQ 701
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVL 518
NT+IPW L HT +R+NNW G+ GR+ W
Sbjct: 702 FNTLIPWCLPHTGNRHNNWAGLYGRVEW-------------------------------- 729
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++
Sbjct: 730 -----DGYFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTILDKHR 784
Query: 579 QIGNAVPPPLAKAIGYEIIKC 599
Q+GNAVPPPLAK +G EI KC
Sbjct: 785 QVGNAVPPPLAKHLGLEIKKC 805
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/509 (42%), Positives = 303/509 (59%), Gaps = 68/509 (13%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P+ L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN+
Sbjct: 1017 PVVPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNV 1076
Query: 173 VLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS
Sbjct: 1077 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLS 1136
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++PK+ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R
Sbjct: 1137 YCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRA 1196
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAISD 344
+ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +SD
Sbjct: 1197 IILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSD 1256
Query: 345 LPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP + GA ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+
Sbjct: 1257 LPEIRNGAAALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARM 1308
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSS 452
R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C
Sbjct: 1309 RHIPLAPGSDWRDLPNIEVRLRDG--TTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQ 1366
Query: 453 CT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRN 511
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1367 CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------------------- 1404
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G
Sbjct: 1405 ---------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFG 1449
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ D ++Q+GNAVPPPL++ IG E+ KC+
Sbjct: 1450 NVLDKHRQVGNAVPPPLSETIGLEVKKCV 1478
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 307/521 (58%), Gaps = 76/521 (14%)
Query: 101 IHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF 160
++S + LPK L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N
Sbjct: 1005 LNSGDKLPK--------LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNN 1056
Query: 161 QECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKS 219
+V +DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S
Sbjct: 1057 PGTTVFTEDCNILLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYS 1116
Query: 220 KLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQS 279
K KN LV ++LS+CD ++PKY +LENV V F K+ +L+ CL++M YQ TF VLQ+
Sbjct: 1117 KFKNSLVVSYLSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQA 1176
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVAN--KTSHAP 332
G YGVAQ+R R +ILA+ PG KLP FP+PLH F+ + T++ V+N +T+ +
Sbjct: 1177 GQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTRTNSSL 1236
Query: 333 YRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD +SDLP + GA+ ++ P++ FQR ++ GS+ I L+DH+
Sbjct: 1237 FRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHV 1288
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS------- 443
CK +S L+ R+R IP P +DWRDLPN+ V+L G S KL+Y KK+
Sbjct: 1289 CKDMSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTS--RKLRYTHHDKKNGRSGTGA 1346
Query: 444 ---VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTI 499
VC C C + Q T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1347 LRGVCCCSEGKQCDPADRQFGTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------- 1396
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
F T VT P P+ KQG++LHPEQ RV++VRE AR
Sbjct: 1397 ---------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECAR 1429
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+QGFPD+Y G I D ++Q+GNAVPPPL++AIG EI C+
Sbjct: 1430 SQGFPDTYRLFGNILDKHRQVGNAVPPPLSRAIGLEIKSCV 1470
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 307/521 (58%), Gaps = 76/521 (14%)
Query: 101 IHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF 160
I+S + LPK L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N
Sbjct: 1007 INSGDKLPK--------LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNN 1058
Query: 161 QECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKS 219
+V +DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S
Sbjct: 1059 PGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYS 1118
Query: 220 KLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQS 279
K KN LV ++LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+
Sbjct: 1119 KFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQA 1178
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVAN--KTSHAP 332
G YGVAQ+R R ++LA+ PG KLP FP+PLH F+ + ++ V+N +TS +
Sbjct: 1179 GQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVVVDEKKYVSNITRTSSSL 1238
Query: 333 YRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD +SDLP + GA+ ++ P++ FQR ++ GS+ I L+DHI
Sbjct: 1239 FRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHI 1290
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS------- 443
CK LS L+ R+R IP P +DWRDLPN+ V+L G S KL+Y+ KK+
Sbjct: 1291 CKDLSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTS--RKLRYSHHDKKNGRSSNGA 1348
Query: 444 ---VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTI 499
VC C C + Q +T+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1349 LRGVCSCAEGKPCDPADRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------- 1398
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
F T VT P P+ KQG++LHPEQ RV++VRE AR
Sbjct: 1399 ---------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECAR 1431
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+QGFPD+Y G I D ++Q+GNAVPPPL+KAIG EI C+
Sbjct: 1432 SQGFPDTYRLFGNILDKHRQVGNAVPPPLSKAIGLEIKACV 1472
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/520 (42%), Positives = 303/520 (58%), Gaps = 69/520 (13%)
Query: 103 SKEFLPKFPMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ 161
S+E K P P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N
Sbjct: 1010 SQESQDKEPQEPTVPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNP 1069
Query: 162 ECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
+V +DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S
Sbjct: 1070 GTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSA 1129
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSG 280
KN L ++LS+CD ++PK+ +LENV V F ++ +L+ CL++M YQ TF VLQ+G
Sbjct: 1130 FKNSLAVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAG 1189
Query: 281 NYGVAQSRNRVVILASKPGYKLPSFPQPLHAF-----SNQLFTINGNLVANKT--SHAPY 333
YGVAQ+R R +ILA+ PG KLP FP+PLH F S + V+N T + Y
Sbjct: 1190 QYGVAQTRRRAIILAAAPGEKLPRFPEPLHVFAPRACSPSVVVDEKRYVSNVTRGNGGIY 1249
Query: 334 RSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHIC 391
R+ITVRD +SDLP + GA ++ P++ FQR ++ GS+ I L+DHIC
Sbjct: 1250 RTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRHIR-GSQYQPI-------LRDHIC 1301
Query: 392 KILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS-------- 443
K +S L+ R+R IP P +DWRDLPNI V+L G + T+KL+Y KK+
Sbjct: 1302 KDMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTN--TKKLRYTHADKKNGRSGTGAL 1359
Query: 444 --VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTII 500
VC C C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1360 RGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF---------- 1408
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARA 560
F T VT P P+ KQG++LHPEQ RV++VRE AR+
Sbjct: 1409 --------------------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARS 1442
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
QGFPD+Y F G + D ++Q+GNAVPPPL+KAIG EI KC+
Sbjct: 1443 QGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEIKKCV 1482
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/509 (41%), Positives = 303/509 (59%), Gaps = 68/509 (13%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P+ L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN+
Sbjct: 218 PVVPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNV 277
Query: 173 VLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS
Sbjct: 278 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLS 337
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R
Sbjct: 338 YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRA 397
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAISD 344
+ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +SD
Sbjct: 398 IILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSD 457
Query: 345 LPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP + GA ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+
Sbjct: 458 LPEIRNGAAALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARM 509
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSS 452
R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C
Sbjct: 510 RHIPLAPGSDWRDLPNIEVRLRDG--TTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQ 567
Query: 453 CT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRN 511
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 568 CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF--------------------- 605
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G
Sbjct: 606 ---------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFG 650
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ D ++Q+GNAVPPPL++ IG E+ KC+
Sbjct: 651 NVLDKHRQVGNAVPPPLSETIGLEVKKCV 679
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/510 (42%), Positives = 303/510 (59%), Gaps = 68/510 (13%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
MP + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN
Sbjct: 982 MPKVPKYRTLDVFSGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1041
Query: 172 LVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++L
Sbjct: 1042 VLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYL 1101
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
+ D ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G YGVAQ+R R
Sbjct: 1102 RYXDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1161
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAIS 343
+ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD++S
Sbjct: 1162 AIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDEKRYVSNVTRGNGGIYRTITVRDSMS 1221
Query: 344 DLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP + GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+E R
Sbjct: 1222 DLPEIRNGASALEISYNGEPQSWFQRQIR-GTQYQPI-------LRDHICKDMSALVEGR 1273
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSS 451
+R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C
Sbjct: 1274 MRHIPLAPGSDWRDLPNIEVRLKDG--TMTKKLRYTHTDKKNGRSSTGALRGVCTCAGGK 1331
Query: 452 SCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1332 PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------- 1370
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F
Sbjct: 1371 ----------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFF 1414
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I D ++Q+GNAVPPPL++AIG EI KC+
Sbjct: 1415 GNILDKHRQVGNAVPPPLSRAIGLEIKKCV 1444
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/506 (42%), Positives = 297/506 (58%), Gaps = 71/506 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EG+ QAGVA+ W++E E S A +Y N + V +DCN +L+ +
Sbjct: 942 LRMLDIFAGCGGLSEGMHQAGVAESLWAIEKESSAANAYRLNNPKTMVFSEDCNKLLQRV 1001
Query: 178 LKG-HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G + G LPQK +V+L+ GPPCQGFS +NR + S KN L+ TFLS+CD +
Sbjct: 1002 MDGDRVDNNGQKLPQKGDVELLCGGPPCQGFSGMNRFNLRQYSLFKNSLIVTFLSYCDYY 1061
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ ++ENV V K+ +L+ CL++M YQ TF +LQ+G+YGV Q+R R+++LA+
Sbjct: 1062 RPKFFVMENVRNFVFCKKSMVLKLTLRCLIRMGYQCTFGILQAGSYGVPQTRRRMILLAA 1121
Query: 297 KPGYKLPSFPQPLHAFSNQLFTI-----NGNLVAN--KTSHAPYRSITVRDAISDLPRVS 349
PG LP FP P H FS + ++ + + N + APYR+ITV+DA+ DLP +
Sbjct: 1122 APGEILPKFPIPTHVFSKRCCSLAVIVDSKRYITNCVQKESAPYRAITVKDALYDLPEIK 1181
Query: 350 QGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
G+N + P THFQR M+ + L DHICK +SPL+E R+ IP+
Sbjct: 1182 CGSNIEEMSYVGEPITHFQRKMRGKP--------YQSKLTDHICKEMSPLVEARMSYIPT 1233
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK----------KSVCDC---KSSSSCT 454
+DWRDLPNI V+L G +YT+KL Y K + VC C K T
Sbjct: 1234 TNGSDWRDLPNIVVQLSDG--TYTKKLDYMYNDKRVGRSKTNAFRGVCRCSIRKQLCDPT 1291
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
K Q NT+IPW L HTASR+NNW+G+ GR+ W F
Sbjct: 1292 DK-QFNTLIPWCLPHTASRHNNWKGLYGRIEWS-GF------------------------ 1325
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
F T +T P P+ KQG++LHP Q+RV++VRE AR+QGF DSY F G I
Sbjct: 1326 ------------FSTTITNPEPMGKQGRVLHPVQNRVVSVRECARSQGFLDSYRFFGTIT 1373
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKCI 600
D ++Q+GNAVPPPLA AIG+EI KCI
Sbjct: 1374 DKHRQVGNAVPPPLAAAIGHEIRKCI 1399
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/503 (44%), Positives = 295/503 (58%), Gaps = 68/503 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EGL Q GV CW++E E S A +Y N V DCN VLK +
Sbjct: 806 LRTLDIFAGCGGLSEGLDQVGVVNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCNNVLKQI 865
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G + G LP++ EVDL+ GPPCQGFS +NR + E S KN LV ++LS+CD F
Sbjct: 866 MEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFSGMNRFNQREYSMFKNSLVTSYLSYCDYF 925
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ ILENV V F K+ +L+ CL+KM YQ F VLQ+G+YGV Q+R R +I+A+
Sbjct: 926 RPKFFILENVRNFVSFKKSMVLKLTLSCLVKMGYQCEFGVLQAGSYGVPQTRRRAIIIAA 985
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS------HAPYRSITVRDAISDLPRVSQ 350
PG LP FP+P H F+++ +++ + ++K APYR+ TV DA+SDLP +
Sbjct: 986 APGEILPKFPEPQHVFASKALSLSVTINSHKYQALKRLHSAPYRTTTVYDAMSDLPEIKN 1045
Query: 351 GANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
GAN + P THFQ+ +I H+ ++L+DHICK +SPL+E R+ IP
Sbjct: 1046 GANKMEIGYDTEPLTHFQK------KIRGKHM---QVLRDHICKDMSPLVEARMSYIPCI 1096
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK----------SVCDCKSSSSCT-SKG 457
P +DWRDLPN VKL G + T+ L Y K KK VC C + C S
Sbjct: 1097 PGSDWRDLPNKVVKLRDG--NTTKLLLYLHKDKKQGPGKNGENRGVCACANGKPCDPSDR 1154
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
Q NT+IPW L HT +R+NNW G+ GRL WD F
Sbjct: 1155 QFNTLIPWCLPHTGNRHNNWAGLYGRLEWD-GF--------------------------- 1186
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
F T VT P P+ KQG++LHPEQ RV++VRE +R+QGFPDS+ F G I D +
Sbjct: 1187 ---------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECSRSQGFPDSFRFYGNILDKH 1237
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+QIGNAV PP++ AIG EI K I
Sbjct: 1238 RQIGNAVAPPMSAAIGQEIRKSI 1260
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/474 (43%), Positives = 289/474 (60%), Gaps = 48/474 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W+VE+ A ++ N +V +DCN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAVEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASAQEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y KK+ C
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDKKNGC---------------------- 1463
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
S +GV A ++ D T ++ NT+IPW L HT +R+N+W G+ GRL WD
Sbjct: 1464 ----SSTGALRGVCS-CAEGKACDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGF 1518
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+
Sbjct: 1519 FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQV 1572
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 295/506 (58%), Gaps = 68/506 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL +GL +AGVA+ W++E E + A ++ N+ +V DCN +L+ +
Sbjct: 936 LRTLDIFAGCGGLSDGLHEAGVAETLWAIEKEETAAYAFRLNYPNATVFSTDCNTLLRKV 995
Query: 178 LKG-HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+KG G PQK EV+L+ GPPCQGFS +NR + S KN LV + LS+ D +
Sbjct: 996 MKGDRIDENGQKYPQKGEVELLCGGPPCQGFSGMNRFNLRQYSLFKNSLVVSCLSYLDYY 1055
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ ++ENV V F ++ +L+ CL++M YQ TF +LQ+GNYGV Q+R R++ILA+
Sbjct: 1056 RPKFFVMENVRNFVTFKRSMVLKLTLCCLVRMGYQCTFGILQAGNYGVPQTRRRLIILAA 1115
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG LP +P+P + F+ + ++ + K S AP+R+I+VRDA+SDLP +
Sbjct: 1116 APGETLPCYPEPTNVFTRRCCRLSVVVDNRKYSSNCAWKESAPFRTISVRDAMSDLPPIK 1175
Query: 350 QGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
G N + N P +HFQR ++ + +L+DHICK ++P++E RI IP+
Sbjct: 1176 NGWNKEEMPYGNEPMSHFQRKVRGKQ--------YQPMLRDHICKEMAPIIEARIAHIPT 1227
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-SK 456
+DWRDLPNI ++L +++ KL+Y K++ VC C + C +
Sbjct: 1228 ASGSDWRDLPNIVLQL--SDNTFANKLEYTYHDKRAGESSISALRGVCSCCTGRPCDPTD 1285
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1286 KQFNTLIPWCLPHTGNRHNHWSGLYGRLEWD-GF-------------------------- 1318
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
F T VT P P+ KQG++LHP Q RV++VRE AR+QGF D + F G + D
Sbjct: 1319 ----------FSTTVTNPEPMGKQGRVLHPVQTRVVSVRECARSQGFRDMFRFYGTVHDK 1368
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCIGN 602
++Q+GNAVPPPL AIG+EI KCI N
Sbjct: 1369 HRQVGNAVPPPLGTAIGHEIRKCIRN 1394
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Tribolium
castaneum]
Length = 1187
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 288/507 (56%), Gaps = 69/507 (13%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P PLKCLD+F+GCGGL +G AGVA W++E ++ ++ N + C V +DDCN+
Sbjct: 730 PFGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIENDKPALDTFRHNNRTCHVFRDDCNV 789
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+L++++ G KG LP K EV++IV GPPCQGFS +NR E E S KN LV + LS
Sbjct: 790 LLRNVMSG----KG-GLPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLFKNSLVVSLLSL 844
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
CD ++P +LENV + + IL+ CL+ + YQV ++++G +GV Q+R R +
Sbjct: 845 CDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFI 904
Query: 293 ILASKPGYKLPSFPQPLHAF----SNQLFTINGNLVANK---TSHAPYRSITVRDAISDL 345
++AS PGY+LP P+P H F S ++G N T APYR + VRDAI+DL
Sbjct: 905 LIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADL 964
Query: 346 PRVSQGANCYLF---HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
P + N + +HFQR M+ N ELL DHICK ++P+++ RI
Sbjct: 965 PAIEHDDNRPQMPYDDDEGTSHFQRKMRG---------NQEELL-DHICKPIAPIVQTRI 1014
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK------SVCDCKSSSSCT-S 455
+LIP ADWR+LPN+ V+LP G + + +Y KK+K VC C +C +
Sbjct: 1015 KLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPNRGVCACSVEKACDPN 1074
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HTA R+NNW GV GRL +W
Sbjct: 1075 DRQSNTLIPWCLPHTADRHNNWAGVYGRL----------------------------DWS 1106
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G F T T P P+ KQG+++HP+Q+R+++VRE AR+QGFPD F G +
Sbjct: 1107 GY---------FATTTTNPEPMGKQGRVIHPDQNRLISVRECARSQGFPDKTKFFGSVTS 1157
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Y+QIGNAVPPPLAKAIG EI + + N
Sbjct: 1158 KYRQIGNAVPPPLAKAIGLEIKRALRN 1184
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 278/486 (57%), Gaps = 89/486 (18%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+ LV+
Sbjct: 1116 LRTLDVFSGCGGLSEGFHQAGL-------------------------------QLVMAGE 1144
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD ++
Sbjct: 1145 V---TNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYR 1201
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1202 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1261
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY-- 355
PG KLP FP+PLH S+ P+R+ITVRD +SDLP + GA+
Sbjct: 1262 PGEKLPLFPEPLHVLSS----------------GPFRTITVRDTMSDLPEIRNGASALEI 1305
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP P +DWRD
Sbjct: 1306 SYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPLAPGSDWRD 1357
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
LPNI V+L G + KL+Y KK+ C S
Sbjct: 1358 LPNIEVRLSDG--TMARKLRYTYHDKKNGC--------------------------SSTG 1389
Query: 476 NWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTP 534
+GV + ++ D T ++ NT+IPW L HT +R+N+W G+ GRL WD F T VT P
Sbjct: 1390 ALRGVCSCVEASKACDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNP 1449
Query: 535 NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG
Sbjct: 1450 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGL 1509
Query: 595 EIIKCI 600
EI +C+
Sbjct: 1510 EIKRCM 1515
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/503 (39%), Positives = 289/503 (57%), Gaps = 61/503 (12%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ LD+F+GCGGL GL +G+ W++E + A ++ N E +V +DCN +LK
Sbjct: 761 PLRGLDIFAGCGGLSRGLEDSGLVISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLKL 820
Query: 177 LLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ G + K ++PQK EVD I GPPCQGFS +NR + S KN L+ +FLS+ D
Sbjct: 821 AMAGEKSNSKNQNIPQKGEVDFICGGPPCQGFSGMNRFNSGQYSLFKNSLIVSFLSYIDF 880
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
++PKY ++ENV V F ++ +L+ C+ +M YQ TF +LQ+GN+GV Q+R R++I+A
Sbjct: 881 YRPKYFVMENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQAGNFGVPQTRRRLIIMA 940
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANK-------TSHAPYRSITVRDAISDLPRV 348
+ PG KLP +P+P++ F+ + +++ + K + AP R++TV DA SDLP +
Sbjct: 941 AAPGEKLPFYPEPINVFNRKSSSLSVQVGDEKFKTNCKYVNSAPLRTLTVYDAWSDLPGI 1000
Query: 349 SQGA--NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
S GA +++ P TH Q++++ + L DHICK +S L++ R+ LIP
Sbjct: 1001 SNGAYQERIPYNSTPITHLQKLLRYPDNQY-----ADSTLCDHICKEMSSLVQARMALIP 1055
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDCKSSSSCTSKG- 457
+DWRDLPNI V+LP G + T ++ K + VC C S C +
Sbjct: 1056 VCEGSDWRDLPNITVQLPEGLKTNTLLYTHHDIKNGYGPNGALRGVCTCASGDKCDPQDR 1115
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
Q NTIIPW L HT +R+NNW G+ GRLA W G
Sbjct: 1116 QNNTIIPWCLPHTGNRHNNWAGLYGRLA----------------------------WSGF 1147
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
T +T P P+ KQG++LHPEQ RV++VRE AR+QGF DS++F G I D +
Sbjct: 1148 CS---------TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFKDSFIFCGSIFDKH 1198
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+QIGNAVPPP+ AIG+ IIK I
Sbjct: 1199 RQIGNAVPPPMGTAIGHAIIKAI 1221
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/630 (36%), Positives = 329/630 (52%), Gaps = 78/630 (12%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + + D + L+ ++ +D S ++ V++ + E
Sbjct: 1019 IKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEY--GEDLLES 1076
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDT 116
I D D + E Y +K K F P +AR K + P+ P +
Sbjct: 1077 IQDYSQGGPDRFYFLEAY-NSKTKSFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEP 1135
Query: 117 P-------LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +D
Sbjct: 1136 EAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTED 1195
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1196 CNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1255
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1256 FLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1315
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDA 341
R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+IT+RD
Sbjct: 1316 RRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITMRDT 1375
Query: 342 ISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
+SDLP + GA+ P+ ++ + L Q ++ R
Sbjct: 1376 MSDLPEIQNGASA------PEISYKWRATVLVPEAAARVALPAHPQGPYPQVHERAGGCR 1429
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSS 451
+R IP P +DWRDLPNI V+L G T KL+Y K+ VC C
Sbjct: 1430 MRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLRYTFHDTKNGCSSTGALRGVCSCAEGK 1487
Query: 452 SCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
+C + Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1488 TCDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF-------------------- 1526
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y
Sbjct: 1527 ----------------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLF 1570
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1571 GNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1600
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 277/476 (58%), Gaps = 64/476 (13%)
Query: 144 WSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGP 202
W++E+ A ++ N +V +DCN++LK ++ G T G LPQK +V+++ GP
Sbjct: 4 WAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCGGP 63
Query: 203 PCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIF 262
PCQGFS +NR SK KN LV ++LS+CD ++PK+ +LENV V F + +L+
Sbjct: 64 PCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTL 123
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-- 320
CL++M YQ TF VLQ+G YGVAQ+R R +ILA+ PG KLP +P+PLH F+ + ++N
Sbjct: 124 RCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVV 183
Query: 321 ---GNLVANKT--SHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGS 373
+N T + YR+ITVRD +SDLP + GA+ ++ P++ FQR ++ G+
Sbjct: 184 VDDKKYFSNVTRGNGGVYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR-GT 242
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHS---- 429
+ I L+DHICK LS L+ R+R IP P +DWRDLPNI V+L G S
Sbjct: 243 QYQPI-------LKDHICKDLSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTSSKKLR 295
Query: 430 YTEKLKYNAKKK----KSVCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRL 484
YT K N + + VC C C + Q NT+IPW L HT +R+N+W G+ GRL
Sbjct: 296 YTHPDKKNGRSSSGALRGVCTCSGGVPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRL 355
Query: 485 AWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKIL 544
W D F T VT P P+ KQG++L
Sbjct: 356 EW-------------------------------------DGFFSTTVTNPEPMGKQGRVL 378
Query: 545 HPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
HPEQ RV++VRE AR+QGFPD+Y F G + D ++Q+GNAVPPPL++AIG EI KC+
Sbjct: 379 HPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSRAIGLEIKKCV 434
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/494 (41%), Positives = 294/494 (59%), Gaps = 52/494 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 948 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTAVFTEDCNVLLKLV 1007
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1008 MAGETANARGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1067
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1068 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1127
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1128 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1187
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1188 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1239
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSL 467
P +DWRDLPNI V+L G + KL+Y +K+ SSS +G + +
Sbjct: 1240 APGSDWRDLPNIEVRLSDG--TMARKLRYTHHDRKN----GRSSSGALRGVCSCV--EGA 1291
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
AS ++ G G PW L + + +G LG A ES
Sbjct: 1292 ARAASPCSHRDGGTG------------------PWGLPAARTWGSLPRG-LGHRALAES- 1331
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
+PL+ QG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPP
Sbjct: 1332 ------KHPLSPQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPP 1385
Query: 588 LAKAIGYEIIKCIG 601
LAKAIG EI C+
Sbjct: 1386 LAKAIGLEIKLCVA 1399
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/527 (39%), Positives = 292/527 (55%), Gaps = 79/527 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1195 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1254
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1255 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1314
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFH---------------------CLLKMNYQVTFD 275
+P++ +LENV V L + Q
Sbjct: 1315 RPRFFLLENVRNFVSXXXXXXXXXXXXXXXXXAGRWMWPAHDPASSQPSLTESRVQWHRP 1374
Query: 276 VLQS-------------GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI 319
+Q+ G YGVAQ+R R +ILA+ PG KLP FP+PLH F+ QL +
Sbjct: 1375 AIQAAEAGVVLCPTGGAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVV 1434
Query: 320 --NGNLVANKT--SHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGS 373
+ V+N T S P+R+ITVRD +SDLP V GA+ ++ P++ FQR ++ G+
Sbjct: 1435 VDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLR-GA 1493
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK 433
+ I L+DHICK +S L+ R+R IP P +DWRDLPNI V+L G + K
Sbjct: 1494 QYQPI-------LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDG--TMARK 1544
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
L+Y +K+ SSS +G + + A+R
Sbjct: 1545 LRYTHHDRKN----GRSSSGALRGVCSCVEAGKACDPAAR-------------------- 1580
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++
Sbjct: 1581 -QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVS 1639
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
VRE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1640 VRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCM 1686
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 287/492 (58%), Gaps = 55/492 (11%)
Query: 114 LDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
+D P L+ LD+FSGCGGL EG QAG+ + W++E+ A ++ N +V +DCN+
Sbjct: 1139 IDLPKLRTLDVFSGCGGLSEGFHQAGICETLWAIEMWEPAAQAFRLNNPGSTVFTEDCNV 1198
Query: 173 VLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+LK ++ G T LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS
Sbjct: 1199 LLKLVMAGEVTNLLRQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS 1258
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ GV R V
Sbjct: 1259 YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQV-PVGVP-PRQHV 1316
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ L + + Q ++ L + S AP+R+ITVRD +SDLP + G
Sbjct: 1317 LCCC-------------LGSRAGQSGGVSPALFRPRLSSAPFRTITVRDTMSDLPEIRNG 1363
Query: 352 ANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
A+ ++ P++ FQR ++ GS + + L+DHICK +SPL+ R+R IP P
Sbjct: 1364 ASAPEIAYNGEPQSWFQRQLR-GS-------HYQPTLRDHICKDMSPLVAARMRHIPLAP 1415
Query: 410 NADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVH 469
+DWRDLPNI V L G + +KL+Y KK+ SC+S G + S
Sbjct: 1416 GSDWRDLPNIEVHLTDG--TLAKKLRYTHHDKKN--------SCSSSGNLRGVC--SCAE 1463
Query: 470 TASRNNNWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFD 528
A R + D T ++ NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1464 AAGR---------------ACDPTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFS 1508
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVPPPL
Sbjct: 1509 TTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPL 1568
Query: 589 AKAIGYEIIKCI 600
AKAIG EI C+
Sbjct: 1569 AKAIGLEIKLCM 1580
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 208/501 (41%), Positives = 266/501 (53%), Gaps = 67/501 (13%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
++ L+ LDLFSGCGGL GL QAGV++ CW+VE + A ++ NF +C V DCN +
Sbjct: 554 VEAKLRSLDLFSGCGGLSLGLSQAGVSEACWAVERDPVIAEAFKRNFPKCCVYAADCNAM 613
Query: 174 LKSLLKGHT-QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
L S+L G + G P K EVDLI AGPPCQG+S LN+ E + KN LV T LSF
Sbjct: 614 LGSILAGESCDPSGQVYPLKGEVDLISAGPPCQGYSLLNKFTSSEAYQFKNSLVVTALSF 673
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
CD +QPKY ++ENV+ +L+ + CLL++ YQ F +LQ+G+YGV QSR R +
Sbjct: 674 CDYYQPKYFVMENVSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAGSYGVPQSRRRFI 733
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTI-------NGNLVANKTSHAPYRSITVRDAISDL 345
++A+ G LP+FP+P+HAF + L K H R + +RDA DL
Sbjct: 734 LMAAAQGLLLPAFPEPIHAFPVAFCDVYIDKRKFKPGLERIKIGH--LRPLQIRDAFDDL 791
Query: 346 PRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
P V+ + + H P D S + DH + + L R I
Sbjct: 792 PDVAANSTTAV-HIKPTAKSLPWSSDSSVVF-----------DHCVRPVDALNAARFAHI 839
Query: 406 PSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKK------KKSVCDCKSSSSCTSKGQK 459
P ADWRDLPNI V L G S T LKY K +K VC C C S+ QK
Sbjct: 840 PRVRGADWRDLPNISVPLSDG--SQTNILKYPFKGQIEGCVRKGVCACVEGKKCKSERQK 897
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
NT+IPW L HTA NN+W+GV GRL D G
Sbjct: 898 NTLIPWWLPHTAQSNNHWKGVYGRL------DERG------------------------- 926
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
F TI+T P P KQG++LHP +DR+ +VRE AR QGFPD Y+F G I Y Q
Sbjct: 927 ------CFRTIITNPQPGVKQGRVLHPSKDRIASVRECARGQGFPDDYIFVGTIEKRYIQ 980
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
+GNAVPPPLAKAIG EI K +
Sbjct: 981 VGNAVPPPLAKAIGIEIRKSL 1001
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/509 (39%), Positives = 278/509 (54%), Gaps = 93/509 (18%)
Query: 108 PKFPMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI 166
P P L P + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 772 PNEPQTLKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGATVF 831
Query: 167 QDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S KN L
Sbjct: 832 TEDCNILLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSAFKNSL 891
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ-SGNYGV 284
V ++LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ SG G
Sbjct: 892 VVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQVSGTPGC 951
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
S + S+ NG + YR+ITVRD +SD
Sbjct: 952 VGSGWAAGVYLSRG---------------------NGGI---------YRTITVRDTMSD 981
Query: 345 LPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP + GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+E R+
Sbjct: 982 LPEIRNGASALEISYNGEPQSWFQRQIR-GTQYQPI-------LRDHICKDMSALVEGRM 1033
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSS 452
R IP P +DWRDLPNI V+L G + T+KL+Y KK+ VC C +
Sbjct: 1034 RHIPLAPGSDWRDLPNIEVRLRDG--TMTKKLRYTHSDKKNGRSSTGALRGVCTCAGGTP 1091
Query: 453 CT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRN 511
C + Q NT+IPW L HT +R+N+W G+ GRL W
Sbjct: 1092 CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEW------------------------- 1126
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
D F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G
Sbjct: 1127 ------------DGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFG 1174
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
I D ++Q+GNAVPPPL++AIG EI KC+
Sbjct: 1175 NILDKHRQVGNAVPPPLSRAIGLEIKKCV 1203
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 274/495 (55%), Gaps = 73/495 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V++ V SL
Sbjct: 1140 LRTLDVFSGCGGLSEGFHQAGISQTLWAIEMWDPAAQAFRLNNPGSTVLE-----VTNSL 1194
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD ++
Sbjct: 1195 --------GQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYR 1246
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ G + V A +
Sbjct: 1247 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQGD--GCEAAPTPVKPAAFR 1304
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY-- 355
G + ++ + ++ + S P+R+ITVRD +SDLP + GA+
Sbjct: 1305 EGSASSQEMATVIRWTAAVCVPRSAMLYCRLSSCPFRTITVRDTMSDLPEIRNGASALEI 1364
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R +P P +DWRD
Sbjct: 1365 SYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRNVPLAPGSDWRD 1416
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKGQKNTIIPW 465
LPNI V+L G + T KL+Y +K+ VC C S +C S +
Sbjct: 1417 LPNIEVRLSDG--TMTRKLRYTYHDRKNGCSSTGALRGVCSCASGKACDSTAR------- 1467
Query: 466 SLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
Q NT+IPW L HT +R+N+W G+ GRL WD
Sbjct: 1468 -----------------------------QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDG 1498
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D ++Q+GNAVP
Sbjct: 1499 FFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVP 1558
Query: 586 PPLAKAIGYEIIKCI 600
PPLAKAIG EI +C+
Sbjct: 1559 PPLAKAIGLEIKRCM 1573
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 280/523 (53%), Gaps = 105/523 (20%)
Query: 108 PKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
PK D L LD+F+GCGGL EG+ Q+G+A W++E + + A ++ N +V
Sbjct: 1025 PKETSANDEKLSMLDIFAGCGGLSEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFF 1084
Query: 168 DDCNLVLKSLLK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFS 208
D+CN+VL+S+++ ++++ SLP+ EVD I GPPCQGFS
Sbjct: 1085 DNCNVVLRSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1144
Query: 209 QLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKM 268
+NR + SK++ +V FLS+ D F+P+Y +LENV V FNK + + LL+M
Sbjct: 1145 GMNRFNKRNWSKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEM 1204
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI--NGNLV-- 324
YQV F +LQ+G+YG++QSR R +I A+ P LP +P+P+H F++ I +GN V
Sbjct: 1205 GYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVHVFASAQLKIPLSGNSVYA 1264
Query: 325 -ANKT-SHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHI 380
A+ T AP RSITVRD I DLP V+ G + N P++ FQ+ ++ G+ +
Sbjct: 1265 AADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETPYGNEPQSWFQKNIRGGATV----- 1319
Query: 381 NLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKK 440
L+DHICK ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1320 -----LRDHICKEMNELNFIRCQRIPKRPGADWRDLPDEKVKL----------------- 1357
Query: 441 KKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTII 500
S GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1358 --------------STGQTVDLIPWCLPNTAERHNQWKGLFGRLDW-------------- 1389
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARA 560
D +F T +T P P+ K G HPEQDR++TVRE AR+
Sbjct: 1390 -----------------------DGNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECARS 1426
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
QGFPDSY F G + + ++QIGNAVPPPLAKA+G ++ + I A
Sbjct: 1427 QGFPDSYKFFGTMQNKHRQIGNAVPPPLAKALGVKLKEAIRQA 1469
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 266/478 (55%), Gaps = 69/478 (14%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P PLKCLD+F+GCGGL +G AGVA W++E ++ ++ N + C V +DDCN+
Sbjct: 748 PFGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIENDKPALDTFRHNNRTCHVFRDDCNV 807
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+L++++ G KG LP K EV++IV GPPCQGFS +NR E E S KN LV + LS
Sbjct: 808 LLRNVMSG----KG-GLPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLFKNSLVVSLLSL 862
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
CD ++P +LENV + + IL+ CL+ + YQV ++++G +GV Q+R R +
Sbjct: 863 CDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFI 922
Query: 293 ILASKPGYKLPSFPQPLHAF----SNQLFTINGNLVANK---TSHAPYRSITVRDAISDL 345
++AS PGY+LP P+P H F S ++G N T APYR + VRDAI+DL
Sbjct: 923 LIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADL 982
Query: 346 PRVSQGANCYLF---HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
P + N + +HFQR M+ N ELL DHICK ++P+++ RI
Sbjct: 983 PAIEHDDNRPQMPYDDDEGTSHFQRKMRG---------NQEELL-DHICKPIAPIVQTRI 1032
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK------SVCDCKSSSSCT-S 455
+LIP ADWR+LPN+ V+LP G + + +Y KK+K VC C +C +
Sbjct: 1033 KLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPNRGVCACSVEKACDPN 1092
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HTA R+NNW GV GRL +W
Sbjct: 1093 DRQSNTLIPWCLPHTADRHNNWAGVYGRL----------------------------DWS 1124
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
G F T T P P+ KQG+++HP+Q+R+++VRE AR+QGFPD F G +
Sbjct: 1125 GY---------FATTTTNPEPMGKQGRVIHPDQNRLISVRECARSQGFPDKTKFFGSV 1173
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 280/523 (53%), Gaps = 105/523 (20%)
Query: 108 PKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
PK D L LD+F+GCGGL EG+ Q+G+A W++E + + A ++ N +V
Sbjct: 889 PKETSANDEKLSMLDIFAGCGGLSEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFF 948
Query: 168 DDCNLVLKSLLK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFS 208
D+CN+VL+S+++ ++++ SLP+ EVD I GPPCQGFS
Sbjct: 949 DNCNVVLRSIMEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFS 1008
Query: 209 QLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKM 268
+NR + SK++ +V FLS+ D F+P+Y +LENV V FNK + + LL+M
Sbjct: 1009 GMNRFNKRNWSKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEM 1068
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI--NGNLV-- 324
YQV F +LQ+G+YG++QSR R +I A+ P LP +P+P+H F++ I +GN V
Sbjct: 1069 GYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVHVFASAQLKIPLSGNSVYA 1128
Query: 325 -ANKT-SHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHI 380
A+ T AP RSITVRD I DLP V+ G + N P++ FQ+ ++ G+ +
Sbjct: 1129 AADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETPYGNEPQSWFQKNIRGGATV----- 1183
Query: 381 NLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKK 440
L+DHICK ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1184 -----LRDHICKEMNELNFIRCQRIPKRPGADWRDLPDEKVKL----------------- 1221
Query: 441 KKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTII 500
S GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1222 --------------STGQTVDLIPWCLPNTAERHNQWKGLFGRLDW-------------- 1253
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARA 560
D +F T +T P P+ K G HPEQDR++TVRE AR+
Sbjct: 1254 -----------------------DGNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECARS 1290
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
QGFPDSY F G + + ++QIGNAVPPPLAKA+G ++ + I A
Sbjct: 1291 QGFPDSYKFFGTMQNKHRQIGNAVPPPLAKALGVKLKEAIQQA 1333
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 272/505 (53%), Gaps = 79/505 (15%)
Query: 111 PMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P L P L+ LD+FSGCGGL EG QAG S S Q +V +D
Sbjct: 799 PAELKLPKLRTLDVFSGCGGLSEGFHQAG------------SGPVSAWMGDQCTTVFTED 846
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 847 CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 906
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ V +
Sbjct: 907 FLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQ-----VGAAT 961
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
R L KP + P + + V +T P+R+ITVRD +SDLP +
Sbjct: 962 PRDAELGRKPFWAPPGSVAAPRPSGVTIGALTAPRVPPRTYSGPFRTITVRDTMSDLPEI 1021
Query: 349 SQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1022 RNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARMRHIP 1073
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCT-S 455
P +DWRDLPNI V+L G + T KL+Y +KK+ VC C C +
Sbjct: 1074 LAPGSDWRDLPNIEVRLSDG--TTTRKLRYTHHEKKNGRSSSGALRGVCCCAEGKPCDPA 1131
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
Q NT+IPW L HT +R+N+W G+ GRL WD F
Sbjct: 1132 DRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD-GF------------------------- 1165
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y G I D
Sbjct: 1166 -----------FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILD 1214
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1215 KHRQVGNAVPPPLAKAIGLEIKWCV 1239
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 259/513 (50%), Gaps = 105/513 (20%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D L LD+F+GCGGL EGL QAGVA W++E E + +++ N E +V ++CN++L
Sbjct: 1125 DNRLATLDIFAGCGGLSEGLRQAGVATTKWAIEYEHPASEAFNLNHPETNVFCENCNVIL 1184
Query: 175 KSLLK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE 215
+ +++ + K LP + EVD I GPPCQGFS +NR
Sbjct: 1185 RCIMERGGDSDECLSTPDAQEMASALSDEKKKLLPAQGEVDFINGGPPCQGFSGMNRFNT 1244
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
SK++ ++ FLS+ + F+P+Y +LENV V FNK + + LL+M YQV F
Sbjct: 1245 GAWSKVQCEMILGFLSYAEYFRPRYFLLENVRNFVSFNKGQTFRLTLATLLEMGYQVRFG 1304
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI------NGNLVANKTS 329
VLQ+GNYGV+QSR R I A+ P LP +P+P+H F + I + V +
Sbjct: 1305 VLQAGNYGVSQSRKRAFIWAAAPNEILPEWPEPMHVFGSSQLKIALPGGASYAAVRDAGK 1364
Query: 330 HAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQ 387
AP R++TV+D I DLP V GA+ + +PP + FQ+ ++ L
Sbjct: 1365 GAPLRAMTVKDTIYDLPPVENGASKEEIKYSDPPVSWFQKQIRGNETA----------LY 1414
Query: 388 DHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDC 447
DHI K ++ L R + IP +P ADWR LP+I +KL
Sbjct: 1415 DHIAKEMNELNLERCKHIPKYPGADWRTLPDIKIKL------------------------ 1450
Query: 448 KSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHT 507
S G +IPW L +TA R+N W+G+ GRL W
Sbjct: 1451 -------STGTMVDLIPWCLPNTADRHNQWKGLFGRLDW--------------------- 1482
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
D +F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY
Sbjct: 1483 ----------------DGNFPTSVTDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSY 1526
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
F G I ++QIGNAVPPPLA+A+G + I
Sbjct: 1527 KFSGTIQSKHRQIGNAVPPPLARALGLMLKAAI 1559
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 265/513 (51%), Gaps = 105/513 (20%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
+T L LD+F+GCGGL +GL QAGV+ W++E E ++ N E +V D+CN++L
Sbjct: 1085 ETRLATLDIFAGCGGLSQGLEQAGVSATKWAIEYEEPAGKAFRKNHPETTVFVDNCNVIL 1144
Query: 175 KSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRARE 215
++++ K Q + +S LP +VD I GPPCQGFS +NR +
Sbjct: 1145 RAIMEKCGDQDECISTKEANELAEKLDEDQKRTLPLPGQVDFINGGPPCQGFSGMNRFNQ 1204
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
SK++ ++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV F
Sbjct: 1205 SSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFG 1264
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTS 329
+L++G YGV+QSR R I A+ P LP +P+P+H F I+ + V +
Sbjct: 1265 ILEAGAYGVSQSRKRAFIWAAAPDEVLPEWPEPMHVFGVPELKISLSKGVHYAAVRSTQY 1324
Query: 330 HAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQ 387
AP+R ITVRD I DLP V G + + P + FQ+ ++ G I L
Sbjct: 1325 GAPFRPITVRDTIGDLPSVVNGESNTKREYKAQPISWFQKEIR-GDNI---------ALT 1374
Query: 388 DHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDC 447
DHICK ++ L +R + IP P ADWRDLP V L
Sbjct: 1375 DHICKEMNELNLIRCKKIPKRPGADWRDLPEEKVTL------------------------ 1410
Query: 448 KSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHT 507
SKGQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1411 -------SKGQVVDLIPWCLPNTAKRHNQWKGLFGRL----------------------- 1440
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
+W+G +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY
Sbjct: 1441 -----DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSY 1486
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
VF+G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1487 VFQGNIIHKHRQIGNAVPPPLAFALGRKLKEAV 1519
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 266/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+PL+ L LD+F+GCGGL EGL QAGV+ W++E E ++ N E ++CN
Sbjct: 1076 LPLENRLATLDIFAGCGGLSEGLQQAGVSVTKWAIEYEEPAGEAFSLNHPEALTFVNNCN 1135
Query: 172 LVLKSLLKG------------------HTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNR 212
++L++++K K ++ LP+ +V+ I GPPCQGFS +NR
Sbjct: 1136 VILRAVMKACGDADDCISTSEAIELAEKLDDKEINNLPRPGQVEFINGGPPCQGFSGMNR 1195
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+PKY +LENV V FNK + + LL+M YQV
Sbjct: 1196 FNQSTWSKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV 1255
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVAN 326
F +L++G YG++QSR R I A+ P LP +P+P+H F + I+ + V +
Sbjct: 1256 KFGILEAGAYGISQSRKRAFIWAASPEEILPEWPEPMHVFGSPELKISLSDNTRYAAVPS 1315
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R ITVRD I DLP V GA+ + + P + FQ+ ++ D+ +
Sbjct: 1316 TAGGAPFRPITVRDTIGDLPAVGNGASVITMEYKSEPASWFQKKIRG-----DVLV---- 1366
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P ADWRDLP+ V+L
Sbjct: 1367 -LNDHISKEMNELNLIRCQRIPKRPGADWRDLPDEKVRL--------------------- 1404
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ + +IPW L +TA R+N W+G+ GRL W
Sbjct: 1405 ----------SNGQMHDLIPWCLPNTAKRHNQWKGLFGRLEW------------------ 1436
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+ +F T +T P P+ K G HPEQDR+LTVRE AR+QGFP
Sbjct: 1437 -------------------EGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFP 1477
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1478 DSYKFAGNIQHKHRQIGNAVPPPLAYALGRKLREAI 1513
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1093 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1152
Query: 178 LKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1153 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1212
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1213 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1272
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1273 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1332
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 1333 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 1382
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1383 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1415
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1416 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1445
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1446 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1494
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1495 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1524
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1050 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1109
Query: 178 LKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1110 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1169
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1170 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1229
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1230 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1289
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 1290 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 1339
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1340 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1372
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1373 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1402
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1403 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1451
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1452 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1481
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1119 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1178
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1179 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1238
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1239 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1298
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1299 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1358
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 1359 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 1408
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1409 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1441
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1442 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1471
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1472 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1520
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1521 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1550
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1061 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1120
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1121 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1180
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1181 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1240
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1241 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1300
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 1301 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 1350
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1351 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1383
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1384 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1413
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1414 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1462
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1463 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1492
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 266/518 (51%), Gaps = 105/518 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E ++ N E V D+CN
Sbjct: 946 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFSKNHPEAVVFVDNCN 1005
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 1006 VILKAIMDKCGDTDDCISTSEAAEQAAKLPELNINNLPVPGEVEFINGGPPCQGFSGMNR 1065
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1066 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1125
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1126 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 1185
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD I DLP+V GA+ + P + FQ+ ++ +
Sbjct: 1186 TAGGAPFRAITVRDTIGDLPKVENGASKLTLEYGGEPVSWFQKKIRGNMMV--------- 1236
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1237 -LNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKL--------------------- 1274
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1275 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1304
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1305 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1347
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
DSY F G I + ++QIGNAVPPPLA A+G ++ + + N
Sbjct: 1348 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDN 1385
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 269/516 (52%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E +++ N E V D+CN
Sbjct: 1075 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCN 1134
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 1135 VILKAIMDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNR 1194
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1195 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1254
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1255 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 1314
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD I DLP+V GA+ + P + FQ+ ++ GS +
Sbjct: 1315 TAGGAPFRAITVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIR-GSMM--------- 1364
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
+L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1365 VLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKL--------------------- 1403
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1404 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1433
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1434 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1476
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1477 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 1512
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 266/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+PL+ L LD+F+GCGGL EGL QAGV+ W++E E ++ N E ++CN
Sbjct: 97 LPLENRLATLDIFAGCGGLSEGLQQAGVSVTKWAIEYEEPAGEAFSLNHPEALTFVNNCN 156
Query: 172 LVLKSLLKG------------------HTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNR 212
++L++++K K ++ LP+ +V+ I GPPCQGFS +NR
Sbjct: 157 VILRAVMKACGDADDCISTSEAIELAEKLDDKEINNLPRPGQVEFINGGPPCQGFSGMNR 216
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+PKY +LENV V FNK + + LL+M YQV
Sbjct: 217 FNQSTWSKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV 276
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVAN 326
F +L++G YG++QSR R I A+ P LP +P+P+H F + I+ + V +
Sbjct: 277 KFGILEAGAYGISQSRKRAFIWAASPEEILPEWPEPMHVFGSPELKISLSDNTRYAAVPS 336
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R ITVRD I DLP V GA+ + + P + FQ+ ++ D+ +
Sbjct: 337 TAGGAPFRPITVRDTIGDLPAVGNGASVITMEYKSEPASWFQKKIRG-----DVLV---- 387
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P ADWRDLP+ V+L
Sbjct: 388 -LNDHISKEMNELNLIRCQRIPKRPGADWRDLPDEKVRL--------------------- 425
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ + +IPW L +TA R+N W+G+ GRL W
Sbjct: 426 ----------SNGQMHDLIPWCLPNTAKRHNQWKGLFGRLEW------------------ 457
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+ +F T +T P P+ K G HPEQDR+LTVRE AR+QGFP
Sbjct: 458 -------------------EGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFP 498
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I ++QIGNAVPPPLA A+G ++ + I
Sbjct: 499 DSYKFAGNIQHKHRQIGNAVPPPLAYALGRKLREAI 534
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1112 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1171
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1172 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1231
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1232 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1291
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1292 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1351
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 1352 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 1401
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1402 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1434
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1435 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1464
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1465 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1513
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1514 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1543
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 259/508 (50%), Gaps = 105/508 (20%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P + L LD+F+GCGGL +GL +AGV+ W++E E ++ N E +V D+CN+
Sbjct: 1086 PKEIRLATLDIFAGCGGLSQGLKKAGVSDTKWAIEYEEPAGQAFKQNHPESTVFVDNCNV 1145
Query: 173 VLKSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRA 213
+L++++ KG Q VS LP +VD I GPPCQGFS +NR
Sbjct: 1146 ILRAIMEKGGDQDDCVSTTEANELAAKLAEDQKSTLPLPGQVDFINGGPPCQGFSGMNRF 1205
Query: 214 RELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT 273
+ SK++ ++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV
Sbjct: 1206 NQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVR 1265
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANK 327
F +L++G YGV+QSR R I A+ P LP +P+P+H F I+ + V +
Sbjct: 1266 FGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRST 1325
Query: 328 TSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLREL 385
AP+R ITVRD I DLP V G + + + + FQ+ ++ G+ I
Sbjct: 1326 ALGAPFRPITVRDTIGDLPSVENGESMTNKEYKDVAVSWFQKEIR-GNMI---------A 1375
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DHICK ++ L +R + IP P ADW DLPN VKL
Sbjct: 1376 LTDHICKAMNQLNLIRCQHIPKRPGADWHDLPNEKVKL---------------------- 1413
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
S G +IPW L +TA R+N W+G+ GRL
Sbjct: 1414 ---------SNGHVEEMIPWCLPNTAKRHNGWKGLFGRL--------------------- 1443
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
+WQG +F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD
Sbjct: 1444 -------DWQG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPD 1487
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIG 593
SY F G I ++QIGNAVPPPLA A+G
Sbjct: 1488 SYEFAGNIIHKHRQIGNAVPPPLAFALG 1515
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 266/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E +++ N E V D+CN
Sbjct: 1086 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCN 1145
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 1146 VILKAIMDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNR 1205
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1206 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1265
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1266 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 1325
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD I DLP+V GA+ + P + FQ+ ++ +
Sbjct: 1326 TAGGAPFRAITVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNMMV--------- 1376
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1377 -LNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKL--------------------- 1414
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1415 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1444
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1445 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1487
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1488 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 1523
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 268/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + + LD+F+GCGGL EGL QAG + W++E E ++ N E +V D+CN
Sbjct: 1098 VPKENRISTLDIFAGCGGLSEGLQQAGASFTKWAIEYEEPAGEAFRQNHPEAAVFVDNCN 1157
Query: 172 LVLKSLL-------------KGHTQHKGVS------LPQKHEVDLIVAGPPCQGFSQLNR 212
++LK+++ + Q ++ LP EV+ I GPPCQGFS +NR
Sbjct: 1158 VILKAIMDKCGDASDCVSTSEAAEQAAKLAEENIKNLPVPGEVEFINGGPPCQGFSGMNR 1217
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1218 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1277
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1278 RFGILEAGTFGVAQSRKRAFIWAAAPGEILPDWPEPMHVFASPELKITLPDGKYYAAAKS 1337
Query: 330 ---HAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD I DLP+V GAN + + P + FQ+ ++ GS I
Sbjct: 1338 TAGGAPFRAITVRDTIGDLPKVENGANKLILEYGGEPTSWFQKKIR-GSTI--------- 1387
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1388 ALNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKL--------------------- 1426
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1427 ----------SSGQMVDLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1456
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1457 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1499
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1500 DSYQFAGTIQSKHRQIGNAVPPPLAFALGRKLKEAV 1535
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL +AG + W++E E ++ N E +CN++L+++
Sbjct: 1107 LKTLDIFAGCGGLSEGLTKAGASVTKWAIEYEEPAGDAFRLNHPEALAFVHNCNVILRAI 1166
Query: 178 L-------------KGHTQHKGV------SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ + Q + +LP+ +VD I GPPCQGFS +NR +
Sbjct: 1167 MTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFSGMNRFNQSTW 1226
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1227 SKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILE 1286
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLF--TINGN----LVANKTSHAP 332
+G +GV+QSR R I A+ P LP +P+P+H F++ ++NGN + S AP
Sbjct: 1287 AGAFGVSQSRKRAFIWAASPEEILPEWPEPMHVFASPELRVSLNGNSQYAAARSTASGAP 1346
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ + + L DHI
Sbjct: 1347 FRAITVRDTIGDLPPVGNGASNPTIEYKNEPVSWFQKRIRGDTSV----------LTDHI 1396
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP VKL
Sbjct: 1397 SKEMNELNVIRCQRIPKRPGADWRDLPEEKVKL--------------------------- 1429
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1430 ----STGQMVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1459
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD Y F
Sbjct: 1460 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDGYKFS 1508
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I +KQIGNAVPPPLA A+G ++ + I
Sbjct: 1509 GNIQHKHKQIGNAVPPPLAYALGRKLKEAI 1538
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 266/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E +++ N E V D+CN
Sbjct: 1086 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCN 1145
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 1146 VILKAIMDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNR 1205
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1206 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1265
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1266 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 1325
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD + DLP+V GA+ + P + FQ+ ++ +
Sbjct: 1326 TAGGAPFRAITVRDTVGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNMMV--------- 1376
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1377 -LNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKL--------------------- 1414
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1415 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1444
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1445 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1487
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1488 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 1523
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 269/516 (52%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E +++ N E V D+CN
Sbjct: 334 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCN 393
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 394 VILKAIMDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNR 453
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 454 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 513
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 514 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 573
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD I DLP+V GA+ + P + FQ+ ++ GS +
Sbjct: 574 TAGGAPFRAITVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIR-GSMM--------- 623
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
+L DHI K ++ L +R + IP P DW DLP+ VKL
Sbjct: 624 VLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKL--------------------- 662
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 663 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 692
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 693 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 735
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 736 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 771
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL +GL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 1102 LATLDIFAGCGGLSQGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1161
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 1162 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1221
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1222 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1281
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 1282 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 1341
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DH+
Sbjct: 1342 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHV 1391
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1392 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 1424
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1425 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1454
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 1455 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 1503
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1504 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 1533
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+FSGCGGL EGL QAGV+ W++E E ++ N E V ++CN++L+++
Sbjct: 1106 LATLDIFSGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHPESLVFINNCNVILRAV 1165
Query: 178 LK--GHTQ---------HKGVSLPQK--------HEVDLIVAGPPCQGFSQLNRARELEK 218
++ G T SL +K +VD I GPPCQGFS +NR +
Sbjct: 1166 MEKCGDTDDCISTSEAIELAASLDEKIINDLPLPGQVDFINGGPPCQGFSGMNRFSQSTW 1225
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1226 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILE 1285
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGN----LVANKTSHAP 332
+G YGV+ SR R I A+ P LP +P+P+H FS +++GN V + + AP
Sbjct: 1286 AGAYGVSHSRKRAFIWAASPEEVLPEWPEPMHVFSAPELKISLSGNSHYAAVRSTANGAP 1345
Query: 333 YRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ G+ + L DHI
Sbjct: 1346 FRAITVRDTIGDLPVVGNGASATNMEYKNDPVSWFQKRIR-GNMV---------TLTDHI 1395
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1396 SKEMNELNLIRCQKIPKRPGADWRDLPDEKVKL--------------------------- 1428
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1429 ----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1458
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HPEQDR+LTVRE AR+QGF DSY F
Sbjct: 1459 --DWEG---------NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFRDSYKFA 1507
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1508 GNIQHKHRQIGNAVPPPLAYALGIKLKEAL 1537
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 238/417 (57%), Gaps = 67/417 (16%)
Query: 204 CQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFH 263
CQGFS +NR E SK KN L+ ++LS+CD ++P++ +LENV V F ++ +L+
Sbjct: 1 CQGFSGMNRFNSREYSKFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALR 60
Query: 264 CLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---- 319
CL++M YQ TF VLQ+G+YGVAQ+R R +ILA+ PG KLP +P+P H F+ + +
Sbjct: 61 CLVRMGYQCTFGVLQAGSYGVAQTRRRAIILAAAPGEKLPVYPEPQHTFAPRAMQLSVMV 120
Query: 320 -----NGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDG 372
N N + N TS PYR+ITVRDA+SDLP + GA + +THFQR+++
Sbjct: 121 DDRKFNSN-IKNMTS-TPYRTITVRDAMSDLPEIKNGAKAEEISYKGDAQTHFQRLIRGH 178
Query: 373 SRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHS--- 429
+ +L+DH+CK +SPL+ R+ IP P +DWRDLPN+ ++L G +
Sbjct: 179 QH--------QPILRDHVCKEMSPLVAARMTHIPLVPGSDWRDLPNLEIRLSDGSKAKKL 230
Query: 430 -YTEKLKYNAK----KKKSVCDCKSSSSCTS-KGQKNTIIPWSLVHTASRNNNWQGVLGR 483
YT K N K ++ V C + C Q T+ PW L HT +R+N+W G+ GR
Sbjct: 231 LYTHPDKRNGKGSNGQRXXVXACATXRVCDPLDRQFXTLXPWCLPHTGNRHNHWAGLYGR 290
Query: 484 LAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKI 543
L W D F T VT P P+ K G++
Sbjct: 291 LEW-------------------------------------DGFFSTTVTNPEPMGKXGRV 313
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
LHPEQ RV++VRE AR+QGFPD+Y F G I D ++QIGNAVPPP+ +AIG EI KC+
Sbjct: 314 LHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQIGNAVPPPMGRAIGLEIKKCL 370
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 266/510 (52%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E +V D+CN++LK++
Sbjct: 9 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 68
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +Q ++LP EV+ I GPPCQGFS +NR +
Sbjct: 69 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 128
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 129 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 188
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVANKTS---HAP 332
+G +GVAQSR R I A+ PG LP +P+P+H F++ IN G A S AP
Sbjct: 189 AGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAP 248
Query: 333 YRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP+V GA+ L + P + FQ+ ++ G+ I L DHI
Sbjct: 249 FRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIR-GNTI---------ALNDHI 298
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 299 SKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKL--------------------------- 331
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 332 ----SSGQLVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 361
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFPD+Y F
Sbjct: 362 --DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFA 410
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 411 GNIQSKHRQIGNAVPPPLAFALGRKLKEAV 440
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 262/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL EGL +AG + W++E E ++ N E +CN++L+++
Sbjct: 1128 LKTLDIFAGCGGLSEGLTKAGASVTKWAIEYEEPAGDAFRLNHPEALAFVHNCNVILRAI 1187
Query: 178 L-------------KGHTQHKGV------SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ + Q + +LP+ +VD I GPPCQGFS +NR +
Sbjct: 1188 MTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQVDFINGGPPCQGFSGMNRFNQSTW 1247
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK + ++ FLSF + F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1248 SKAQCEMILAFLSFAEYFRPKYSLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILE 1307
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLF--TINGN----LVANKTSHAP 332
+G +GV+QSR R I A+ P LP +P+P+H F++ ++NGN + S AP
Sbjct: 1308 AGAFGVSQSRKRAFIWAASPEEILPEWPEPMHVFASPELRVSLNGNSQYAAARSTASGAP 1367
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ + + L DHI
Sbjct: 1368 FRAITVRDTIGDLPPVGNGASNPTIEYKNEPVSWFQKRIRGDASV----------LTDHI 1417
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP VKL
Sbjct: 1418 SKEMNELNVIRCQRIPKRPGADWRDLPEEKVKL--------------------------- 1450
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1451 ----STGQMVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1480
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD Y F
Sbjct: 1481 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDGYKFS 1529
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I +KQIGNAVPPPLA A+G ++ + I
Sbjct: 1530 GNIQHKHKQIGNAVPPPLAYALGKKLKEAI 1559
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 247/436 (56%), Gaps = 50/436 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+F+GCGGL EGL QAG+ + W++E E + A +Y N +V DDCN++LK +
Sbjct: 237 LRTLDVFAGCGGLSEGLYQAGITENLWAIEKEEAAANAYRLNNPNATVFTDDCNILLKMV 296
Query: 178 LK---GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ T G LPQK +V+L+ GPPCQGFS +NR + S KN LV ++LS+CD
Sbjct: 297 MDVSGXKTNKVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSYLSYCD 356
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
++P + I+ENV V F ++ +L+ CL++M YQ TF +LQ+GNYG+ Q+R R++IL
Sbjct: 357 YYRPNFFIMENVRNFVTFERSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRIIIL 416
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAISDLP 346
A+ PG LP +P+P H FS + ++ LV NK T AP+R+I VRDA+ DLP
Sbjct: 417 AAAPGQILPQYPEPTHVFSKRTCRLSV-LVDNKKYSTNCSWTESAPFRTINVRDALFDLP 475
Query: 347 RVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRL 404
+ G N + N +HFQR ++ + LL+DHICK ++PL+E RI
Sbjct: 476 EIKNGWNKEEMSYTNDAISHFQRRIRGKQ--------YQPLLRDHICKEMTPLVETRIAH 527
Query: 405 IPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
IP +DWRDLPNI V+L G + T+KL+Y KK KSS+
Sbjct: 528 IPVASGSDWRDLPNIVVRLSDG--TCTKKLEYTHDDKKV---GKSSTGA----------- 571
Query: 465 WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWD 524
++GV + Q NT+IPW L HT +R+N+W G+ GRL W
Sbjct: 572 ------------YRGVCSCCMGKQCDPTDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWS 619
Query: 525 ESFDTIVTTPNPLNKQ 540
F T +T P P+ KQ
Sbjct: 620 GFFSTTITNPEPMGKQ 635
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++G++ W++E E ++ N E +V ++CN++LK++
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ ++ K +LP EV+ I GPPCQGFS +NR +
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1211
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1212 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1271
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNL---VANKTSHAP 332
+G YGVAQSR R I A+ PG LP +P+P+H F++ I +G V + + AP
Sbjct: 1272 AGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAP 1331
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RSITVRD I DLP V GA + + P + FQ+ ++ L DHI
Sbjct: 1332 FRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSD----------MASLNDHI 1381
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1382 SKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKL--------------------------- 1414
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1415 ----STGQMVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1444
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY F
Sbjct: 1445 --DWEG---------NFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFA 1493
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I + ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1494 GNIQNKHRQIGNAVPPPLAYALGRKLKQAI 1523
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++G++ W++E E ++ N E +V ++CN++LK++
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ ++ K +LP EV+ I GPPCQGFS +NR +
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1211
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1212 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1271
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNL---VANKTSHAP 332
+G YGVAQSR R I A+ PG LP +P+P+H F++ I +G V + + AP
Sbjct: 1272 AGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAP 1331
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RSITVRD I DLP V GA + + P + FQ+ ++ L DHI
Sbjct: 1332 FRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSD----------MASLNDHI 1381
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1382 SKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKL--------------------------- 1414
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1415 ----STGQMVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1444
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY F
Sbjct: 1445 --DWEG---------NFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFA 1493
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I + ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1494 GNIQNKHRQIGNAVPPPLAYALGRKLKQAI 1523
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL +AG++ W++E E ++ N E ++ ++CN++L+++
Sbjct: 1124 LATLDIFAGCGGLSEGLERAGISVTKWAIEYEEPAGEAFKQNHPEALMLINNCNVILRAI 1183
Query: 178 LKG------------------HTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ K +S P+ EV+ I GPPCQGFS +NR +
Sbjct: 1184 MSACGDADDCICTSEASELAEKLDEKEISNFPRPGEVEFINGGPPCQGFSGMNRFNQRSW 1243
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PK+ +LENV V FNK + LL+M YQV F VL+
Sbjct: 1244 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGNTFRLTLASLLEMGYQVRFGVLE 1303
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI--NGN----LVANKTSHAP 332
+G +G++QSR R I A+ P LP +P+P+H F+ I +GN V + + AP
Sbjct: 1304 AGAFGISQSRKRAFIWAASPEEILPEWPEPMHVFAGPELKIKLSGNSQYAAVRSTANGAP 1363
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ + + L DHI
Sbjct: 1364 FRAITVRDTIGDLPAVGNGASLTTMQYKNEPVSWFQKTIRGDALV----------LTDHI 1413
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1414 SKEMNELNLIRCKRIPKHPGADWRDLPDKKVKL--------------------------- 1446
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ ++PW L +TA R+N W+G+ GRL
Sbjct: 1447 ----SNGQLVDLVPWCLPNTAKRHNQWKGLFGRL-------------------------- 1476
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HPEQDR+LTVRE AR+QGF DSY F
Sbjct: 1477 --DWEG---------NFPTSVTDPQPMGKVGMCFHPEQDRILTVRECARSQGFADSYQFL 1525
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1526 GNIQQKHRQIGNAVPPPLAFALGRKLKEAV 1555
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 261/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N + ++CN++L+++
Sbjct: 1092 LATLDIFAGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHAGSLMFINNCNVILRAV 1151
Query: 178 LKG--------HTQHKGV-----------SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ T G LP +VD I GPPCQGFS +NR +
Sbjct: 1152 MEKCGDADDCISTSEAGELASSLDAKVIDGLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1211
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1212 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILE 1271
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN------GNLVANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F+ I + V + AP
Sbjct: 1272 AGAYGVSQSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYSAVRSTAYGAP 1331
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ G + +L DHI
Sbjct: 1332 FRAITVRDTIGDLPDVGNGASKTNLEYGNDPVSWFQKKIR-GDMV---------VLTDHI 1381
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1382 SKEMNELNLIRCKKIPKRPGADWRDLPDEKVKL--------------------------- 1414
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1415 ----STGQMVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1444
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HPEQDR+LTVRE AR+QGFPDSY F
Sbjct: 1445 --DWEG---------NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDSYQFS 1493
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPL+ A+G ++ + +
Sbjct: 1494 GNIHHKHRQIGNAVPPPLSYALGRKLKEAL 1523
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++G++ W++E E ++ N E +V ++CN++LK++
Sbjct: 1087 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1146
Query: 178 LKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ ++ K +LP EV+ I GPPCQGFS +NR +
Sbjct: 1147 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1206
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1207 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1266
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNL---VANKTSHAP 332
+G YGVAQSR R I A+ PG LP +P+P+H F++ I +G V + + AP
Sbjct: 1267 AGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAP 1326
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RSITVRD I DLP V GA + + P + FQ+ ++ L DHI
Sbjct: 1327 FRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSD----------MASLNDHI 1376
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1377 SKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKL--------------------------- 1409
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1410 ----STGQMVDLIPWCLPNTAKRHNQWKGLYGRL-------------------------- 1439
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY F
Sbjct: 1440 --DWEG---------NFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFA 1488
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I + ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1489 GNIQNKHRQIGNAVPPPLAYALGRKLKQAI 1518
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/516 (35%), Positives = 265/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL EGL QAGV+ W++E E +++ N E V D+CN
Sbjct: 1007 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCN 1066
Query: 172 LVLKSLLK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNR 212
++LK+++ + LP+ + EV+ I GPPCQGFS +NR
Sbjct: 1067 VILKAIMDKCGDTDDCVSTSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNR 1126
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1127 FNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQV 1186
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS 329
F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1187 RFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPEPMHVFASPELKITLPDGQYYAAARS 1246
Query: 330 ---HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R+ITVRD + DLP+V GA+ + P + FQ+ ++ +
Sbjct: 1247 TAGGAPFRAITVRDTVGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNMMV--------- 1297
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + I P DW DLP+ VKL
Sbjct: 1298 -LNDHISKEMNELNLIRCQHIQKRPGCDWHDLPDEKVKL--------------------- 1335
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1336 ----------SNGQMADLIPWCLPNTAKRHNQWKGLYGRL-------------------- 1365
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGFP
Sbjct: 1366 --------DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFP 1408
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1409 DSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 1444
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/510 (36%), Positives = 263/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E + ++CN++L+++
Sbjct: 1112 LATLDIFAGCGGLSEGLQQAGVSTTKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAV 1171
Query: 178 LK----------GHTQHKGVS---------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ K S LP +VD I GPPCQGFS +NR +
Sbjct: 1172 MERCGDADDCISTSEAAKMASSLDAKVIDGLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1231
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1232 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILE 1291
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F+ I + V + AP
Sbjct: 1292 AGAYGVSQSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYAAVRSTAYGAP 1351
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V+ GA+ + N P + FQ+ ++ G + +L DHI
Sbjct: 1352 FRAITVRDTIGDLPDVANGASKTNLEYGNDPISWFQKKIR-GDMV---------VLTDHI 1401
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1402 SKEMNELNLIRCKNIPKRPGADWRDLPDEKVKL--------------------------- 1434
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1435 ----STGQMVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1464
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HPEQDR+LTVRE AR+QGFPD+Y F
Sbjct: 1465 --DWEG---------NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDNYQFF 1513
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1514 GNIQHKHRQIGNAVPPPLAYALGRKLKEAL 1543
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 267/511 (52%), Gaps = 105/511 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV+ W++E E ++ N E S+ ++CN++L+++
Sbjct: 1097 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1156
Query: 178 LK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNRARELEK 218
++ SL +K +VD I GPPCQGFS +NR +
Sbjct: 1157 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1216
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1217 SKVQCEMILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1276
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G YGV+QSR RV I A+ P LP +P+P+H F+ T++ N+ V + + AP
Sbjct: 1277 AGAYGVSQSRKRVFIWAASPEETLPEWPEPMHVFAVPELKITLSKNMQYAAVRSTATGAP 1336
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V+ GA+ + N P + FQ+ ++ + L DHI
Sbjct: 1337 FRAITVRDTIGDLPAVTNGASKTGLEYQNGPVSWFQKKIRGNMMV----------LTDHI 1386
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWR LP+ V L GQ V D
Sbjct: 1387 SKEMNELNLIRCQKIPKQPGADWRSLPDEKVALSTGQ----------------VVD---- 1426
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
+IPW L +TA R+N W+G+ GRL
Sbjct: 1427 -----------LIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1449
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR+++VRE AR+QGFPDSY F
Sbjct: 1450 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRLVSVRECARSQGFPDSYKFS 1498
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
G I ++QIGNAVPPPLA A+G ++ + +G
Sbjct: 1499 GNIQHKHRQIGNAVPPPLAFALGRKLKEAVG 1529
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 267/511 (52%), Gaps = 105/511 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV+ W++E E ++ N E S+ ++CN++L+++
Sbjct: 984 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1043
Query: 178 LK-----------GHTQHKGVSLPQKH--------EVDLIVAGPPCQGFSQLNRARELEK 218
++ SL +K +VD I GPPCQGFS +NR +
Sbjct: 1044 MEKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1103
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P++ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1104 SKVQCEMILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1163
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G YGV+QSR RV I A+ P LP +P+P+H F+ T++ N+ V + + AP
Sbjct: 1164 AGAYGVSQSRKRVFIWAASPEETLPEWPEPMHVFAVPELKITLSKNMQYAAVRSTATGAP 1223
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V+ GA+ + N P + FQ+ ++ + L DHI
Sbjct: 1224 FRAITVRDTIGDLPAVTNGASKTGLEYQNGPVSWFQKKIRGNMMV----------LTDHI 1273
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWR LP+ V L GQ V D
Sbjct: 1274 SKEMNELNLIRCQKIPKQPGADWRSLPDEKVALSTGQ----------------VVD---- 1313
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
+IPW L +TA R+N W+G+ GRL
Sbjct: 1314 -----------LIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1336
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR+++VRE AR+QGFPDSY F
Sbjct: 1337 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRLVSVRECARSQGFPDSYKFS 1385
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
G I ++QIGNAVPPPLA A+G ++ + +G
Sbjct: 1386 GNIQHKHRQIGNAVPPPLAFALGRKLKEAVG 1416
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 257/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E V ++CN++LK++
Sbjct: 1124 LATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1183
Query: 178 LK--GHT-----------------QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ G T + + LP +VD I GPPCQGFS +NR
Sbjct: 1184 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1243
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1244 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILE 1303
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F IN + V + S AP
Sbjct: 1304 AGAYGVSQSRKRAFIWAAAPDEILPEWPEPMHVFGVPELKINLSSNSYYAAVRSTASGAP 1363
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R ITVRD I DLP V GA+ + + P + FQ+ ++ + L DHI
Sbjct: 1364 FRPITVRDTIGDLPAVGNGASKVNMEYESDPVSWFQKKIRGNMAV----------LTDHI 1413
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADW+DLP VKL
Sbjct: 1414 SKEMNELNLIRCKRIPKRPGADWKDLPEEKVKL--------------------------- 1446
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1447 ----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1476
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1477 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFY 1525
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G ++QIGNAVPP LA A+G ++ + I
Sbjct: 1526 GNTLHKHRQIGNAVPPTLAYALGRKLKEAI 1555
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/515 (36%), Positives = 261/515 (50%), Gaps = 105/515 (20%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P + L LD+F+GCGGL GL +AGV+ W++E E ++ N E +V D+CN+
Sbjct: 1088 PKEIRLATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNV 1147
Query: 173 VLKSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRA 213
+L++++ KG Q VS LP +VD I GPPCQGFS +NR
Sbjct: 1148 ILRAIMEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRF 1207
Query: 214 RELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT 273
+ SK++ ++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV
Sbjct: 1208 NQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVR 1267
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANK 327
F +L++G YGV+QSR R I A+ P LP +P+P+H F I+ + V +
Sbjct: 1268 FGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRST 1327
Query: 328 TSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLREL 385
AP+R ITVRD I DLP V G + + + FQ+ ++ G+ I
Sbjct: 1328 ALGAPFRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIR-GNTI---------A 1377
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DHICK ++ L +R +LIP+ P ADW DLP V L
Sbjct: 1378 LTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTL---------------------- 1415
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
S G+ +IP+ L +TA R+N W+G+ GRL
Sbjct: 1416 ---------SDGRVEEMIPFCLPNTAERHNGWKGLYGRL--------------------- 1445
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
+WQG +F T VT P P+ K G HPEQ R+LTVRE AR+QGFPD
Sbjct: 1446 -------DWQG---------NFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPD 1489
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
SY F G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1490 SYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEAL 1524
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 255/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV+ W++E E ++ N E V +CN+ L+ +
Sbjct: 1120 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVFLRVV 1179
Query: 178 LK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ + + SLP +VD I GPPCQGFS +NR +
Sbjct: 1180 MQKCGDAEDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1239
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PK+ +LENV V FN+ + + LL+M YQV F +L+
Sbjct: 1240 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1299
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI------NGNLVANKTSHAP 332
+G +GV QSR R I A+ P LP +P+P+H F I + V + S AP
Sbjct: 1300 AGAFGVPQSRKRAFIWAASPEEILPEWPEPMHVFGVPELKIALSETSHYAAVRSTASGAP 1359
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RS+TVRD I DLP V GA+ C + P + FQR ++ S L DHI
Sbjct: 1360 FRSLTVRDTIGDLPAVGNGASKTCIEYQVDPVSWFQRKIRGNSIT----------LSDHI 1409
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1410 TKEMNELNLIRCQRIPKRPGADWRDLPDEKVKL--------------------------- 1442
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1443 ----SNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDW------------------------ 1474
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
D +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1475 -------------DGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFA 1521
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1522 GNILHKHRQIGNAVPPPLAYALGRKLKEAV 1551
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 257/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N E V ++CN++LK++
Sbjct: 1116 LATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1175
Query: 178 LK--GHT-----------------QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ G T + + LP +VD I GPPCQGFS +NR
Sbjct: 1176 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1235
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1236 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILE 1295
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F IN + V + S AP
Sbjct: 1296 AGAYGVSQSRKRAFIWAAAPDEILPEWPEPMHVFGVPELKINLSSNSYYAAVRSTASGAP 1355
Query: 333 YRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R ITVRD I DLP V GA+ + + P + FQ+ ++ + L DHI
Sbjct: 1356 FRPITVRDTIGDLPAVGNGASKVNIEYESDPVSWFQKKIRGNMAV----------LTDHI 1405
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADW+DLP VKL
Sbjct: 1406 SKEMNELNLIRCKRIPKRPGADWKDLPEEKVKL--------------------------- 1438
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1439 ----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1468
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1469 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFY 1517
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G ++QIGNAVPP LA A+G ++ + +
Sbjct: 1518 GNTLHKHRQIGNAVPPTLAYALGRKLKEAV 1547
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 258/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV+ W++E E ++ N E V +CN++L+++
Sbjct: 1120 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1179
Query: 178 LK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ +++ SLP +VD I GPPCQGFS +NR +
Sbjct: 1180 MQKCGDAEDCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1239
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PK+ +LENV V FN+ + + LL+M YQV F +L+
Sbjct: 1240 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1299
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G +GV QSR R I A+ P LP +P+P+H F I + V + S AP
Sbjct: 1300 AGAFGVPQSRKRAFIWAASPEEILPEWPEPMHVFGVPELKITLSETCHYAAVRSTASGAP 1359
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RS+TVRD I DLP V GA+ C + P + FQR ++ S L DHI
Sbjct: 1360 FRSLTVRDTIGDLPAVGNGASKTCIEYQVDPISWFQRKIRGNSIT----------LSDHI 1409
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL C+
Sbjct: 1410 TKEMNELNLIRCQRIPKRPGADWRDLPDEKVKL---------------------CN---- 1444
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1445 ------GQLVDLIPWCLPNTAKRHNQWKGLFGRLDW------------------------ 1474
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
D +F T T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1475 -------------DGNFPTSFTDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFA 1521
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1522 GNILHKHRQIGNAVPPPLAYALGRKLKEAV 1551
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 258/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV+ W++E E ++ N E V +CN++L+++
Sbjct: 1118 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1177
Query: 178 LK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ +++ SLP +VD I GPPCQGFS +NR +
Sbjct: 1178 MQKCGDAENCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1237
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PK+ +LENV V FN+ + + LL+M YQV F +L+
Sbjct: 1238 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1297
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G +GV QSR R I A+ P LP +P+P+H F I + V + S AP
Sbjct: 1298 AGAFGVPQSRKRAFIWAASPEEILPEWPEPMHVFGVPELKITLSETCHYAAVRSTASGAP 1357
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RS+TVRD I DLP V GA+ C + P + FQR ++ S L DHI
Sbjct: 1358 FRSLTVRDTIGDLPAVGNGASKTCIEYQVDPISWFQRKIRGNSIT----------LSDHI 1407
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDLP+ VKL C+
Sbjct: 1408 TKEMNELNLIRCQRIPKRPGADWRDLPDEKVKL---------------------CN---- 1442
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1443 ------GQLVDLIPWCLPNTAKRHNQWKGLFGRLDW------------------------ 1472
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
D +F T T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1473 -------------DGNFPTSFTDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFA 1519
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1520 GNILHKHRQIGNAVPPPLAYALGRKLKEAV 1549
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 260/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV+ W++E E ++ AN E V ++CN++L+++
Sbjct: 1136 LATLDIFAGCGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAI 1195
Query: 178 ------------------LKGHTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
L K +S LP +VD I GPPCQGFS +NR
Sbjct: 1196 MEKCGDIDDCITTTEAAELASKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1255
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P+Y +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1256 SKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1315
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G +GV+QSR R I A+ P LP +P+P+H FS T++ N+ V + + AP
Sbjct: 1316 AGAFGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKITLSENVQYAAVRSTANGAP 1375
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
R+ITVRD I +LP V GA+ + + P + FQ+ ++ + L DHI
Sbjct: 1376 LRAITVRDTIGELPVVGNGASRTNMEYQSDPVSWFQKKIRGNMAV----------LTDHI 1425
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DWRDLP +KL
Sbjct: 1426 SKEMNELNLIRCQKIPKRPGCDWRDLPEEKIKL--------------------------- 1458
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1459 ----SSGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1488
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+WQG +F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD Y F
Sbjct: 1489 --DWQG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDRYQFY 1537
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1538 GNIIHKHRQIGNAVPPPLAFALGTKLKEAV 1567
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 256/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL +GV W++E E ++ N + V +CN++L+++
Sbjct: 1121 LSTLDIFAGCGGLSEGLQHSGVTDTNWAIEYEAPAGDAFRLNHPKTKVFIHNCNVILRAV 1180
Query: 178 LK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ + + SLP +VD I GPPCQGFS +NR +
Sbjct: 1181 MQKCGDSDDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PK+ +LENV V FN+ + + LL+M YQV F +L+
Sbjct: 1241 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1300
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G YGV QSR R I A P LP +P+P+H F+ I + V + S AP
Sbjct: 1301 AGAYGVPQSRKRAFIWAGSPEEVLPEWPEPMHVFAVPELKIALSETSYYAAVRSTASGAP 1360
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RS+TVRD I DLP V GA+ C + P + FQ+ ++ GS I L DHI
Sbjct: 1361 FRSLTVRDTIGDLPVVGNGASKTCIEYQGDPVSWFQKKIR-GSSI---------TLSDHI 1410
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADWRDL + VKL
Sbjct: 1411 SKEMNELNLIRCQRIPKRPGADWRDLEDEKVKL--------------------------- 1443
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 1444 ----SNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDW------------------------ 1475
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
D +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1476 -------------DGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFA 1522
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1523 GNILHKHRQIGNAVPPPLAYALGRKLKEAV 1552
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/515 (36%), Positives = 264/515 (51%), Gaps = 105/515 (20%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P + L LD+F+GCGGL GL +AGV+ W++E E ++ N E +V D+CN+
Sbjct: 157 PKEIRLATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNV 216
Query: 173 VLKSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRA 213
+L++++ KG Q VS LP +VD I GPPCQGFS +NR
Sbjct: 217 ILRAIMEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRF 276
Query: 214 RELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT 273
+ SK++ ++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV
Sbjct: 277 NQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVR 336
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANK 327
F +L++G YGV+QSR R I A+ P LP +P+P+H F I+ + V +
Sbjct: 337 FGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRST 396
Query: 328 TSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLREL 385
AP+R ITVRD I DLP V G + + + FQ+ ++ G+ I
Sbjct: 397 ALGAPFRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIR-GNTI---------A 446
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DHICK ++ L +R +LIP+ P ADW DLP K+K ++
Sbjct: 447 LTDHICKAMNELNLIRCKLIPTRPGADWHDLP---------------------KRKVTLS 485
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
D G+ +IP+ L +TA R+N W+G+ GRL
Sbjct: 486 D----------GRVEEMIPFCLPNTAERHNGWKGLYGRL--------------------- 514
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
+WQG +F T VT P P+ K G HPEQ R+LTVRE AR+QGFPD
Sbjct: 515 -------DWQG---------NFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPD 558
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
SY F G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 559 SYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEAL 593
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 257/516 (49%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + PL LD+F+GCGGL GL AGV+ W++E E ++ N E +V D+CN
Sbjct: 1072 VPKEKPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATVFVDNCN 1131
Query: 172 LVLKSLLKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
++L+++++ +++ +LP +VD I GPPCQGFS +NR
Sbjct: 1132 VILRAIMEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNR 1191
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
SK++ ++ FLSF D F+PKY +LENV V +NK Q LL+M YQV
Sbjct: 1192 FSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQV 1251
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN------GNLVAN 326
F +L++G YGV+Q R RV+I A+ P LP +P+P+H F N I+ + N
Sbjct: 1252 RFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYDAGCN 1311
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+RSITVRD I DLP V G + + P + FQ+ ++ +
Sbjct: 1312 TKFGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRGNMSV--------- 1362
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHICK L+ L +R + IP P ADWRDLP+ V L G EKL+
Sbjct: 1363 -LTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNG---LVEKLR--------- 1409
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
P +L TA +N W+G+ GRL
Sbjct: 1410 -------------------PLALSKTAKNHNEWKGLYGRL-------------------- 1430
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+WQG L +T P P+ K G HPEQDR++TVRE AR+QGFP
Sbjct: 1431 --------DWQGNL---------PISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFP 1473
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1474 DSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1509
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 257/516 (49%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + PL LD+F+GCGGL GL AGV+ W++E E ++ N E +V D+CN
Sbjct: 1070 VPKEKPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATVFVDNCN 1129
Query: 172 LVLKSLLKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
++L+++++ +++ +LP +VD I GPPCQGFS +NR
Sbjct: 1130 VILRAIMEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNR 1189
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
SK++ ++ FLSF D F+PKY +LENV V +NK Q LL+M YQV
Sbjct: 1190 FSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQV 1249
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN------GNLVAN 326
F +L++G YGV+Q R RV+I A+ P LP +P+P+H F N I+ + N
Sbjct: 1250 RFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYDAGCN 1309
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+RSITVRD I DLP V G + + P + FQ+ ++ +
Sbjct: 1310 TKFGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRGNMSV--------- 1360
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHICK L+ L +R + IP P ADWRDLP+ V L G EKL+
Sbjct: 1361 -LTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNG---LVEKLR--------- 1407
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
P +L TA +N W+G+ GRL
Sbjct: 1408 -------------------PLALSKTAKNHNEWKGLYGRL-------------------- 1428
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+WQG L +T P P+ K G HPEQDR++TVRE AR+QGFP
Sbjct: 1429 --------DWQGNL---------PISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFP 1471
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1472 DSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1507
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 269/529 (50%), Gaps = 109/529 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL GL +AGV+ W++E E A ++ N + +V D+CN
Sbjct: 1039 VPKEMRLATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCN 1098
Query: 172 LVLKSLL--------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN 211
++L++++ K K + LP +VD I GPPCQGFS +N
Sbjct: 1099 VILRAIMEKCGDVDDCISTTEAAELAAKLDESQKSI-LPLPGQVDFINGGPPCQGFSGMN 1157
Query: 212 RARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQ 271
R + SK++ ++ FLSF D F+PKY +LENV V FNK Q LL+M YQ
Sbjct: 1158 RFSDRSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTFNKGRTFQLTVASLLEMGYQ 1217
Query: 272 VTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVA 325
V F +L++G YG++Q R R I A+ P LP +P+P+H F+N F I+ + V
Sbjct: 1218 VRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPGFKISLSRRLHYAAVQ 1277
Query: 326 NKTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLR 383
+ AP+RSITVRD I DLP V G + + P + FQ+ M+ G++I
Sbjct: 1278 STKFGAPFRSITVRDTIGDLPPVESGESKINKEYDIVPVSWFQKEMR-GNKI-------- 1328
Query: 384 ELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS 443
+L DHIC+ ++ L +R + IP P ADWRDLP+ VKL
Sbjct: 1329 -VLTDHICQKMNELNLIRCKKIPKTPGADWRDLPDENVKL-------------------- 1367
Query: 444 VCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWS 503
S G +IP L++ A +N ++G+ GRL
Sbjct: 1368 -----------SNGVVVKLIPSGLINKAKEHNGYRGLYGRL------------------- 1397
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGF 563
+WQG L T +TTP P+ G HP+QDR+++VRE AR+QGF
Sbjct: 1398 ---------DWQGNL---------PTSITTPQPMGWVGMCFHPDQDRIISVRECARSQGF 1439
Query: 564 PDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAKAI 612
PDSY F G I D ++QIGNAVPPPLA A+G ++ + + A P + +
Sbjct: 1440 PDSYEFSGKIKDKHRQIGNAVPPPLAFALGRKLKEAL--ATPQEFSSTV 1486
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 258/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCG L EGL ++G + W++E E ++ AN E V ++CN++L+++
Sbjct: 1117 LATLDIFAGCGALSEGLHKSGASSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAI 1176
Query: 178 ------------------LKGHTQHKGV-SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
L K + SLP +VD I GPPCQGFS +NR
Sbjct: 1177 MEKCGDIDECISTAEAAELASKLDDKDLNSLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1236
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P+Y +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1237 SKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1296
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G +GV+QSR R I A+ P LP +P+P+H FS T+ N+ V + + AP
Sbjct: 1297 AGAFGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKITLAENVQYAAVCSTANGAP 1356
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
R+ITVRD I +LP V GA+ + + P + FQ+ ++ + L DHI
Sbjct: 1357 LRAITVRDTIGELPAVGNGASRTNMEYQSDPISWFQKKIRGNMAV----------LTDHI 1406
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P DWRDLP+ +KL
Sbjct: 1407 SKEMNELNLIRCQKIPKRPGCDWRDLPDEKIKL--------------------------- 1439
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L HTA R+N W+G+ GRL
Sbjct: 1440 ----STGQLVDLIPWCLPHTAKRHNQWKGLFGRL-------------------------- 1469
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+WQG +F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD Y F
Sbjct: 1470 --DWQG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDHYQFS 1518
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1519 GNIIHKHRQIGNAVPPPLAFALGRKLKEAL 1548
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 234/400 (58%), Gaps = 67/400 (16%)
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSG 280
KN LV ++LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G
Sbjct: 1 FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAG 60
Query: 281 NYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVAN--KTSHAPY 333
YGVAQ+R R ++LA+ PG KLP FP+PLH F+ + ++ V+N +TS + +
Sbjct: 61 QYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVIVDEKKYVSNITRTSSSLF 120
Query: 334 RSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHIC 391
R+ITVRD +SDLP + GA+ ++ P++ FQR ++ GS+ I L+DHIC
Sbjct: 121 RTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHIC 172
Query: 392 KILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS-------- 443
K LS L+ R+R IP P +DWRDLPN+ V+L G S KL+Y+ KK+
Sbjct: 173 KDLSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTS--RKLRYSHHDKKNGRSSNGAL 230
Query: 444 --VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTII 500
VC C C + Q +T+IPW L HT +R+N+W G+ GRL WD
Sbjct: 231 RGVCSCAEGKPCDPADRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWD------------- 277
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARA 560
G L T VT P P+ KQG++LHPEQ RV++VRE AR+
Sbjct: 278 ---------------GFL---------STTVTNPEPMGKQGRVLHPEQHRVVSVRECARS 313
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
QGFPD+Y G I D ++Q+GNAVPPPL+KAIG EI C+
Sbjct: 314 QGFPDTYRLFGNILDKHRQVGNAVPPPLSKAIGLEIKACV 353
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 265/516 (51%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
M + L LD+F+GCGGL GL Q+GV+ W++E E+ ++ N E + D+CN
Sbjct: 1099 MAQENRLATLDIFAGCGGLSAGLQQSGVSFTKWAIEYEQPAGEAFSENHPETLMFIDNCN 1158
Query: 172 LVLKSLLK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
++L+++++ G + K +LP EVD I GPPCQGFS +NR
Sbjct: 1159 VILRAIMEKCGDADDCVATDEAVKLATGLDEEKLKNLPMPGEVDFINGGPPCQGFSGMNR 1218
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV
Sbjct: 1219 FSQSTWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV 1278
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLF--TINGNL----VAN 326
F +L++G YGV QSR R I A+ P LP +P+P+H F++ T+ G + V +
Sbjct: 1279 RFGILEAGAYGVPQSRKRAFIWAASPKETLPEWPEPMHVFASPELKITMPGGVHYAAVRS 1338
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
+ AP+RSITVRD I DLP V GA+ + + P + FQ++++ G+
Sbjct: 1339 TSGGAPFRSITVRDTIGDLPPVPNGASKPTIKYGSEPVSWFQKLIR-GNMF--------- 1388
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHI K ++ L +R + IP P ADW DLP+ VKL
Sbjct: 1389 ALNDHISKEMNELNFIRCQRIPKHPGADWHDLPDEKVKL--------------------- 1427
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1428 ----------STGQIVDLIPWCLPNTAKRHNQWKGLFGRL-------------------- 1457
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T +T P P+ K G H +QDR++TVRE AR+QGF
Sbjct: 1458 --------DWEG---------NFPTSITDPQPMGKVGMCFHSDQDRIITVRECARSQGFL 1500
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
D Y F G I + +KQIGNAVPPPLA +G ++ + +
Sbjct: 1501 DGYHFSGNIQNRHKQIGNAVPPPLAYVLGLKLKEAV 1536
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/516 (35%), Positives = 258/516 (50%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL GL +AGV+ W++E E ++ N E +V D+CN
Sbjct: 1065 VPKEMRLATLDIFAGCGGLSHGLEKAGVSNTKWAIEYEEPAGHAFKQNHPEATVFVDNCN 1124
Query: 172 LVLKSLLKG-------------------HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
++L+++++ +++ +LP + D I GPPCQGFS +NR
Sbjct: 1125 VILRAIMEKCGDVDDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFSGMNR 1184
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ ++ FLSF D F+PKY +LENV V +NK Q LL++ YQV
Sbjct: 1185 FSDGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQV 1244
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN------GNLVAN 326
F +L++G YGV+Q R RV+I A+ P LP +P+P+H F N I+ + V N
Sbjct: 1245 RFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLHYDTVRN 1304
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+RSITVRD I DLP V G + + P + FQ+ ++ +
Sbjct: 1305 TKFGAPFRSITVRDTIGDLPLVENGESKINKEYRTTPVSWFQKKIRGNMSV--------- 1355
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L DHICK L+ L +R + IP P ADWRDLP+ V L G EKL+
Sbjct: 1356 -LTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNG---LVEKLR--------- 1402
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
P +L TA +N W+G+ GRL
Sbjct: 1403 -------------------PLALSKTAKNHNEWKGLYGRL-------------------- 1423
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+WQG L +T P P+ K G HPEQDR++TVRE AR+QGFP
Sbjct: 1424 --------DWQGNL---------PISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFP 1466
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1467 DSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1502
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 265/515 (51%), Gaps = 105/515 (20%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P + L LD+F+GCGGL GL +AGV+ W++E E A ++ N + +V D+CN+
Sbjct: 1060 PKEMRLATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPDATVFVDNCNV 1119
Query: 173 VLKSLL-KGHT------------------QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRA 213
+L++++ KG +++ +LP +VD I GPPCQGFS +NR
Sbjct: 1120 ILRAIMEKGGDVDDCISTTEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNRF 1179
Query: 214 RELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT 273
+ SK++ ++ FLSF D F+PKY +LENV +V FN + Q LL+M YQV
Sbjct: 1180 SDRSWSKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQVR 1239
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANK 327
F +L++G YG++Q R R I A+ P LP +P+P+H F+N F I+ + V N
Sbjct: 1240 FGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPGFKISLSRGLHCAAVHNT 1299
Query: 328 TSHAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLREL 385
S AP+RSITVRD I DLP V G + + + P + FQ+ M+ +
Sbjct: 1300 KSGAPFRSITVRDTIGDLPPVENGESEINKKYKDVPVSWFQKEMRGNMTV---------- 1349
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DHICK ++ L +R + +P P A WRDLP+ V L G EKL
Sbjct: 1350 LTDHICKQMNELNLIRCKKVPKRPGASWRDLPDENVILSNG---LVEKL----------- 1395
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
+P+++ + A+ N ++G+ GRL
Sbjct: 1396 -----------------VPFAMSNKANEQNRYKGLYGRL--------------------- 1417
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
+WQG +F T +T P P+ G HP+QDR++T+RE AR+QGFPD
Sbjct: 1418 -------DWQG---------NFPTSITDPQPMGFVGVCFHPDQDRIITIRECARSQGFPD 1461
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
SY F G D ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1462 SYEFSGKKKDKHRQIGNAVPPPLAFALGRKLKEAL 1496
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 259/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV W++E E + ++ N E + ++CN++LK++
Sbjct: 1108 LATLDIFAGCGGLSEGLQKSGVCTTKWAIEYEEAAGDAFKLNHPESLMFINNCNVILKAI 1167
Query: 178 L-KGHTQHKGVSLPQKHE------------------VDLIVAGPPCQGFSQLNRARELEK 218
+ K +S P+ E VD I GPPCQGFS +NR +
Sbjct: 1168 MDKTGDADDCISTPEAAELAAKLSEEEIKNLPLPGQVDFINGGPPCQGFSGMNRFNQSSW 1227
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PKY +LENV V FNK + + LL M YQV F +L+
Sbjct: 1228 SKVQCEMILAFLSFADYYRPKYFLLENVRTFVSFNKGQTFRLAIASLLDMGYQVRFGILE 1287
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI----NGNLVANKTSH--AP 332
+G YGV QSR R I A+ P LP +P+P+H F+ I N A +++ AP
Sbjct: 1288 AGAYGVPQSRKRAFIWAASPEETLPEWPEPMHVFAAPELKIALPENKYYAAVRSTQTGAP 1347
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RSITVRD I DLP VS GA+ + P + FQ+ I N+ +L DHI
Sbjct: 1348 FRSITVRDTIGDLPMVSNGASRTSIEYQMDPISWFQK---------KIRANMM-VLTDHI 1397
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP ADW+DLP+ VKL
Sbjct: 1398 SKEMNELNLIRCQRIPKRRGADWQDLPDEKVKL--------------------------- 1430
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1431 ----SSGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1460
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G SF T +T P P+ K G HP+Q R++TVRE AR+QGFPDSY F
Sbjct: 1461 --DWEG---------SFPTSITDPQPMGKVGMCFHPDQHRIVTVRECARSQGFPDSYQFY 1509
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1510 GNILHKHQQIGNAVPPPLAYALGMKLKEAL 1539
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 265/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV+ W++E E ++ N E + ++CN++L+++
Sbjct: 1111 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1170
Query: 178 LK------------------GHTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ K ++ LP +VD I GPPCQGFS +NR +
Sbjct: 1171 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1230
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PK+ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1231 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1290
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F+ T++ N+ V + + AP
Sbjct: 1291 AGAYGVSQSRKRAFIWAASPEETLPEWPEPMHVFAVPELKITLSENMQYAAVRSTATGAP 1350
Query: 333 YRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ G+ + +L DHI
Sbjct: 1351 FRAITVRDTIGDLPDVKNGASITNLEYQNDPVSWFQKKIR-GNMV---------VLMDHI 1400
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADW LP+ VKL
Sbjct: 1401 SKEMNELNLIRCQKIPKQPGADWHSLPDEKVKL--------------------------- 1433
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1434 ----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1463
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HPEQDR+L+VRE AR+QGF DSY F
Sbjct: 1464 --DWEG---------NFPTSITDPQPMGKVGMCFHPEQDRILSVRECARSQGFRDSYQFA 1512
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPL+ A+G ++ + +
Sbjct: 1513 GNIQHKHRQIGNAVPPPLSFALGRKLKEAV 1542
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 265/510 (51%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV+ W++E E ++ N E + ++CN++L+++
Sbjct: 991 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1050
Query: 178 LK------------------GHTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ K ++ LP +VD I GPPCQGFS +NR +
Sbjct: 1051 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1110
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PK+ +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1111 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1170
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGNL----VANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F+ T++ N+ V + + AP
Sbjct: 1171 AGAYGVSQSRKRAFIWAASPEETLPEWPEPMHVFAVPELKITLSENMQYAAVRSTATGAP 1230
Query: 333 YRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R+ITVRD I DLP V GA+ + N P + FQ+ ++ G+ + +L DHI
Sbjct: 1231 FRAITVRDTIGDLPDVKNGASITNLEYQNDPVSWFQKKIR-GNMV---------VLMDHI 1280
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADW LP+ VKL
Sbjct: 1281 SKEMNELNLIRCQKIPKQPGADWHSLPDEKVKL--------------------------- 1313
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1314 ----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1343
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HPEQDR+L+VRE AR+QGF DSY F
Sbjct: 1344 --DWEG---------NFPTSITDPQPMGKVGMCFHPEQDRILSVRECARSQGFRDSYQFA 1392
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPL+ A+G ++ + +
Sbjct: 1393 GNIQHKHRQIGNAVPPPLSFALGRKLKEAV 1422
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 263/511 (51%), Gaps = 106/511 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL Q+GV + W++E E ++ N + ++ ++CN++LK++
Sbjct: 1323 LATLDIFAGCGGLSEGLQQSGVCRTKWAIEYEEPAGDAFKLNHPDTTMFINNCNVILKAI 1382
Query: 178 LKGH-------------------TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ ++ + +LP +VD I GPPCQGFS +NR +
Sbjct: 1383 MDKSGDADDCISTPEAADLAAKLSEEELKNLPLPGQVDFINGGPPCQGFSGMNRFNQSSW 1442
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1443 SKVQCEMILAFLSFADYYRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILE 1502
Query: 279 SGNYGVAQSRNRVVILASKPGYKLP-SFPQPLHAFSNQLFTIN--GN----LVANKTSHA 331
+G +GV QSR R I A+ P LP S+P+P+H F+ + GN V + + A
Sbjct: 1503 AGAFGVPQSRKRAFIWAASPEETLPGSWPEPMHVFAAPELKVALPGNKHYAAVRSTQAGA 1562
Query: 332 PYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDH 389
P+R+ITVRD I DLP V+ GA+ + P + FQ+ +I N+ +L DH
Sbjct: 1563 PFRAITVRDTIGDLPMVTNGASKTTLEYRCDPISWFQK---------NIRANMM-VLTDH 1612
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKS 449
I K ++ L +R + IP ADW DLP VKL
Sbjct: 1613 ISKEMNELNLIRCQRIPKRRGADWHDLPEEKVKL-------------------------- 1646
Query: 450 SSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS 509
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1647 -----STGQLVDLIPWCLPNTAKRHNQWKGLFGRL------------------------- 1676
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
+W+G +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F
Sbjct: 1677 ---DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQF 1724
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1725 YGNILHKHRQIGNAVPPPLAYALGRKLKEAL 1755
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 258/510 (50%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAG++ W++E E ++ N E V ++CN++L+++
Sbjct: 1131 LATLDIFAGCGGLSEGLRQAGISLTKWAIEYEEPAGDAFKLNHPESLVFINNCNVILRAV 1190
Query: 178 L-------------------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ K + LP +VD I GPPCQGFS +NR +
Sbjct: 1191 MEKCGDTDDCISTSEAADLAKSLDEKVKNDLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1250
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L+
Sbjct: 1251 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1310
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--NQLFTINGN----LVANKTSHAP 332
+G YGV+QSR R I A+ P LP +P+P+H F +++GN V + AP
Sbjct: 1311 AGAYGVSQSRKRAFIWAAAPDENLPEWPEPMHVFGVPELKISLSGNSYYSAVRSTAGGAP 1370
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+RSITVRD I DLP V GA+ + + P + FQ+ ++ + L +HI
Sbjct: 1371 FRSITVRDTIGDLPAVGNGASKVNLEYESDPISWFQKKIRGEMAV----------LTEHI 1420
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
K ++ L +R + IP P ADW+ LP+ VKL
Sbjct: 1421 SKEMNELNLIRCQRIPKRPGADWQCLPDEKVKL--------------------------- 1453
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1454 ----STGQIVDLIPWCLPNTAKRHNQWKGLFGRL-------------------------- 1483
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+W+G +F T +T P P+ K G HP+QDR+LTVRE AR+QGF DSY F
Sbjct: 1484 --DWEG---------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFRDSYQFS 1532
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPP LA A+G ++ + +
Sbjct: 1533 GNILHKHRQIGNAVPPTLAYALGRKLKEAV 1562
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 260/513 (50%), Gaps = 105/513 (20%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
+ L LD+F+GCGGL EGL +G + W++E E ++ N E +V ++CN++L
Sbjct: 1090 ENSLATLDIFAGCGGLSEGLQLSGASHTKWAIEYEEPAGQAFGENHPEAAVFVENCNVIL 1149
Query: 175 KSLL-------------KGHTQHKGVS------LPQKHEVDLIVAGPPCQGFSQLNRARE 215
K+++ + Q +S LP EV+ I GPPCQGFS +NR +
Sbjct: 1150 KAIMDKCDDTDDCISTSEASEQAAKLSDEKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ 1209
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
SK++ ++ FLSF + F+P++ +LENV V FNK + + LL+M YQV F
Sbjct: 1210 SPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFG 1269
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVANKTS--- 329
+L++G YGVAQSR R I A+ PG LP +P+P+H F++ I +G A S
Sbjct: 1270 ILEAGAYGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKITLPDGKYYAAAKSTAG 1329
Query: 330 HAPYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQ 387
AP+RSITVRD I DLP V GA+ + + P + FQ+ ++ G + L
Sbjct: 1330 GAPFRSITVRDTIGDLPPVENGASKPTIQYGSEPISWFQKKIR-GDVLS---------LN 1379
Query: 388 DHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDC 447
D I K ++ L +R + IP P DW DLP+ VKL
Sbjct: 1380 DQISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKL------------------------ 1415
Query: 448 KSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHT 507
S GQ +IPW L +TA R+N W+G+ GRL
Sbjct: 1416 -------SSGQMVELIPWCLPNTAKRHNQWKGLYGRL----------------------- 1445
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
+W+G +F T VT P P+ K G HP+QDR++TVRE AR+QGF D Y
Sbjct: 1446 -----DWEG---------NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFLDGY 1491
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
F G I ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1492 RFAGNIQSKHRQIGNAVPPPLAYALGRKLKQAI 1524
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 253/506 (50%), Gaps = 102/506 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N + + +DCN++L+++
Sbjct: 803 LATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 862
Query: 178 LKG------------------HTQHKGV-SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ K + +LP+ +VD I GPPCQGFS +NR + +
Sbjct: 863 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFSGMNRFNQGKW 922
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P++ +LENV V FNK + + LL+M YQV F VL+
Sbjct: 923 SKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLE 982
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKT-SHAPYRSIT 337
+G YGV QSR R I A+ P LP +P+P+H F IN T + P+R+IT
Sbjct: 983 AGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFPGPELKINNYAAVRSTATGGPFRAIT 1042
Query: 338 VRDAISDLPRVSQGANCYLFHNPPK---THFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
VRDAI DLP + GA C P+ + +QR + D+ I L DHI K +
Sbjct: 1043 VRDAIGDLPNIGNGA-CETTMEYPREASSWYQRKFRG-----DMSI-----LTDHISKKM 1091
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ L +R + IP P ADW + N V+L
Sbjct: 1092 NELNLIRCKKIPKRPGADWHAIKNGKVRL------------------------------- 1120
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
S G+ ++P L + R+N W+GVLGRL +W
Sbjct: 1121 SSGRIAKLLPSWLTNKGKRHNQWKGVLGRL----------------------------DW 1152
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
+G F T +T P PL K G HP+QDR+L+VRE AR QGFPDSY F G +
Sbjct: 1153 EG---------HFPTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSGQMH 1203
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLA A+G ++ + +
Sbjct: 1204 HKHRQVGNAVPPPLAFALGRKLKEAV 1229
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 253/506 (50%), Gaps = 102/506 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL QAGV+ W++E E ++ N + + +DCN++L+++
Sbjct: 25 LATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 84
Query: 178 LKG------------------HTQHKGV-SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ K + +LP+ +VD I GPPCQGFS +NR + +
Sbjct: 85 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFSGMNRFNQGKW 144
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+P++ +LENV V FNK + + LL+M YQV F VL+
Sbjct: 145 SKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLE 204
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKT-SHAPYRSIT 337
+G YGV QSR R I A+ P LP +P+P+H F IN T + P+R+IT
Sbjct: 205 AGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFPGPELKINNYAAVRSTATGGPFRAIT 264
Query: 338 VRDAISDLPRVSQGANCYLFHNPPK---THFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
VRDAI DLP + GA C P+ + +QR + D+ I L DHI K +
Sbjct: 265 VRDAIGDLPNIGNGA-CETTMEYPREASSWYQRKFRG-----DMSI-----LTDHISKKM 313
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ L +R + IP P ADW + N V+L
Sbjct: 314 NELNLIRCKKIPKRPGADWHAIKNGKVRL------------------------------- 342
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
S G+ ++P L + R+N W+GVLGRL +W
Sbjct: 343 SSGRIAKLLPSWLTNKGKRHNQWKGVLGRL----------------------------DW 374
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
+G F T +T P PL K G HP+QDR+L+VRE AR QGFPDSY F G +
Sbjct: 375 EG---------HFPTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSGQMH 425
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPLA A+G ++ + +
Sbjct: 426 HKHRQVGNAVPPPLAFALGRKLKEAV 451
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 220/348 (63%), Gaps = 26/348 (7%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ + ++ N+ + V+ +DCN++LK +
Sbjct: 351 LRTLDVFSGCGGLSEGFHQAGISETMWAIEMWKPAGQAFLLNYPKTIVLSEDCNILLKMV 410
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + G LPQK +V++I GPPCQGFS +NR L SK KN L+ +FLS+CD +
Sbjct: 411 MSGETTNSMGQKLPQKGDVEMICGGPPCQGFSGMNRFNTLTYSKFKNSLIASFLSYCDYY 470
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK+ +LENV V F ++ +L+ CL++M YQ TF +LQ+G+YG+AQ+R R ILA+
Sbjct: 471 RPKFFLLENVRNFVSFKRSMVLKLTLRCLVQMGYQCTFGILQAGHYGIAQTRRRAFILAA 530
Query: 297 KPGYKLPSFPQPLHAFSNQLFTI-----NGNLVAN--KTSHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH FS + + N V+N + + AP+R+ITV D++SDLP +
Sbjct: 531 APGEKLPMFPEPLHVFSTRSSLLSAVIDNKRFVSNVKRLTSAPFRTITVYDSLSDLPTIK 590
Query: 350 QGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ + PKT FQR ++ G R +++L+DHICK ++ L+ RI+LIP
Sbjct: 591 NGASLEEISYEGEPKTWFQRQIR-GPR-------HQQVLKDHICKTMNALVMARIKLIPL 642
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK--------KSVCDC 447
P +DWRDLPNI V + G + + KYN KK + VC C
Sbjct: 643 VPGSDWRDLPNIQVHISDGSVTKKLRYKYNDKKNGLSSTGAFRGVCAC 690
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 225/368 (61%), Gaps = 31/368 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1063 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1122
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1123 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1182
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1183 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1242
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1243 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1302
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1303 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1354
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKG 457
P +DWRDLPNI V+L G + KL+YN KK+ VC C C
Sbjct: 1355 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKPCEPAA 1412
Query: 458 QK-NTIIP 464
++ NT+IP
Sbjct: 1413 RQFNTLIP 1420
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/501 (35%), Positives = 250/501 (49%), Gaps = 105/501 (20%)
Query: 127 CGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL--------- 177
CGGL EGL Q+GV+ W++E E ++ AN E V ++CN++L+++
Sbjct: 1055 CGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAIMEKCGDIDD 1114
Query: 178 ---------LKGHTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
L K +S LP +VD I GPPCQGFS +NR SK++ ++
Sbjct: 1115 CISTTEAAELSSKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMIL 1174
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
FLSF D F+P+Y +LENV V FNK + + LL+M YQV F +L++G +GV+QS
Sbjct: 1175 AFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQS 1234
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAPYRSITVRDA 341
R RV I A+ P LP +P+P+H FS I + V + T+ AP R+ITVRD
Sbjct: 1235 RKRVFIWAASPEDVLPEWPEPMHVFSAPELKITLSEKVQYAAVRSTTNGAPLRAITVRDT 1294
Query: 342 ISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
I +L V GA+ + + P + FQ ++ + L HI K ++ L
Sbjct: 1295 IGELQAVGNGASRTNMEYQSDPVSWFQTKIRGNMAV----------LTYHISKEMNELNL 1344
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQK 459
+R + IP P DWRDLP+ ++L S GQ
Sbjct: 1345 IRCQKIPKRPGCDWRDLPDEKIRL-------------------------------SSGQL 1373
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
+IPW L +TA R+N W+G+ GRL +WQG
Sbjct: 1374 VDLIPWCLPNTAKRHNQWKGLFGRL----------------------------DWQG--- 1402
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
+F T +T P P+ K G HP+QDR+LTVRE AR+QGFPD Y F G I ++Q
Sbjct: 1403 ------NFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDCYQFYGNIIHKHRQ 1456
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGNAVPPPLA A+G ++ + +
Sbjct: 1457 IGNAVPPPLAFALGRKLKEAV 1477
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 254/516 (49%), Gaps = 105/516 (20%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL +GL QAGV+ W++E E ++ N E +VI D+CN
Sbjct: 1073 LPKEMRLATLDIFAGCGGLSQGLEQAGVSATKWAIEYEGPAGEAFRKNHPETTVIVDNCN 1132
Query: 172 LVLKSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNR 212
+ L++++ K Q + +S LP +VD I GPPCQGFS +NR
Sbjct: 1133 VTLRAIMEKCGDQDECISTTEANELAAKLDENQKRTLPLPGQVDFINGGPPCQGFSGMNR 1192
Query: 213 ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV 272
+ SK++ +V FLSF D F+P+Y +LENV V ++K ++ + LL+M YQV
Sbjct: 1193 FSQSPWSKIQCQMVLAFLSFVDYFRPRYFLLENVRNFVSYSKGQMFKLTLASLLEMGYQV 1252
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVAN 326
F VL++G YGV+QSR R I A+ P LP +P+P+H F+ I+ + V +
Sbjct: 1253 RFGVLEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFNVSQLNISLSKGLRYAAVRS 1312
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRE 384
AP+R ITVRD I DLP V G + + P + FQ+ ++ +
Sbjct: 1313 TQQGAPFRPITVRDTIGDLPPVENGESNIDKEYETDPVSWFQKEIRGNKNVP-------- 1364
Query: 385 LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
DH+ + ++ +R + IP ADWRDLP+ V L
Sbjct: 1365 --TDHLSQTMNEHNLIRCKRIPKRSGADWRDLPDEKVTL--------------------- 1401
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
S G +IP L + W+G+ GRL
Sbjct: 1402 ----------STGLVVDLIPGCLAAKPGKKKQWKGLFGRL-------------------- 1431
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+W+G +F T VT P P+ GK HP+QDR++TVRE AR+QGFP
Sbjct: 1432 --------DWEG---------NFPTCVTKPGPMGMVGKCFHPDQDRIVTVRECARSQGFP 1474
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
DSY F G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 1475 DSYEFEGDIAHKHRQIGNAVPPPLAFALGRKLKEAV 1510
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 262/481 (54%), Gaps = 50/481 (10%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K + RP +T + D + LF ++ +D S ++ V+F D E
Sbjct: 1010 IKIRINKFYRPENTHRSASAFYGTDINLLFWSDEEAVVDFSDVQGRCTVEF--EDDLLEN 1067
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NAR-PLELAYIL---------KIIHSKEF 106
+ D D ++E Y K K F P +AR PL ++ KE
Sbjct: 1068 LQDYSKGGPDRFYFSEAY-NAKSKKFEDPPNHARNPLNKGKGKGKGKGNAKCQVSEPKEP 1126
Query: 107 LPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI 166
+P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1127 ETAIKLP---KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPSSTVF 1183
Query: 167 QDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR S KN L
Sbjct: 1184 TEDCNVLLKLVMAGKLTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSTFKNSL 1243
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
V +FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVA
Sbjct: 1244 VVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVA 1303
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITV 338
Q+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T + PYR+ITV
Sbjct: 1304 QTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLTSGPYRTITV 1363
Query: 339 RDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSP 396
RD +SDLP + GA+ + P++ FQR ++D + + +L+DHICK +SP
Sbjct: 1364 RDTMSDLPEIQNGASAPEISYSGEPQSWFQRQLRDSA--------YQPILRDHICKDMSP 1415
Query: 397 LMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCD 446
L+ R++ IP P +DWRDLPNI V L G T+KL+YN KK+ VC
Sbjct: 1416 LVAARMKNIPRSPGSDWRDLPNIEVLLSDGVR--TKKLRYNFHDKKNGRSSTGAMRGVCS 1473
Query: 447 C 447
C
Sbjct: 1474 C 1474
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 244/484 (50%), Gaps = 105/484 (21%)
Query: 144 WSVELERSEAASYDANFQECSVIQDDCNLVLKSLL-------------------KGHTQH 184
W++E E ++ N E +V ++CN++LK+++ ++
Sbjct: 4 WAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMDKCGDSDDCISTSEAAERAAKLSED 63
Query: 185 KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILE 244
K +LP EV+ I GPPCQGFS +NR + SK++ ++ FLSF + F+P++ +LE
Sbjct: 64 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLE 123
Query: 245 NVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPS 304
NV V FNK + + LL+M YQV F +L++G YGVAQSR R I A+ PG LP
Sbjct: 124 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPE 183
Query: 305 FPQPLHAFSNQLFTI---NGNLVA---NKTSHAPYRSITVRDAISDLPRVSQGAN--CYL 356
+P+P+H F++ I +G A + + AP+RSITVRD I DLP V GA
Sbjct: 184 WPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ 243
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ + P + FQ+ ++ L DHI K ++ L +R + IP P DW DL
Sbjct: 244 YGSGPVSWFQKKIRSD----------MASLNDHISKEMNELNLIRCKHIPKRPGCDWHDL 293
Query: 417 PNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
P+ VKL S GQ +IPW L +TA R+N
Sbjct: 294 PDEKVKL-------------------------------STGQMVDLIPWCLPNTAKRHNQ 322
Query: 477 WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNP 536
W+G+ GRL +W+G +F T VT P P
Sbjct: 323 WKGLYGRL----------------------------DWEG---------NFPTSVTDPQP 345
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ K G HPEQDR++TVRE AR+QGFPDSY F G I + ++QIGNAVPPPLA A+G ++
Sbjct: 346 MGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKL 405
Query: 597 IKCI 600
+ I
Sbjct: 406 KQAI 409
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 252/518 (48%), Gaps = 108/518 (20%)
Query: 110 FPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
FP L +D+F+GCGGL EG+ QAG A W +E ER AA+++ N + +V ++
Sbjct: 919 FPGDDGIALATMDIFAGCGGLSEGMHQAGAAVSKWGIEYERPAAAAFEVNNPQAAVFCNN 978
Query: 170 CNLVLKSLLKGHT-------------------QHKGVSLPQKHEVDLIVAGPPCQGFSQL 210
CN++L + + + +LP EVD I GPPCQG+S +
Sbjct: 979 CNVLLHAAMTKAGLEDDCDACDDAKEGTANLPSEQMAALPLPGEVDFICGGPPCQGYSGM 1038
Query: 211 NRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY 270
NR + S ++N +V FLS P+Y +LENV V NK+ + LL M Y
Sbjct: 1039 NRFNKGNWSMVQNSMVMAFLS------PRYFLLENVRNFVSHNKSFTFRLTVRSLLDMGY 1092
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN--GNL---VA 325
QV F VL +GN+GVAQSR R I A+ PG LP +P+ +H F TIN G +
Sbjct: 1093 QVRFGVLNAGNFGVAQSRKRTFIWAAAPGELLPDWPKLMHCFRTPQLTINLPGGVQYRAV 1152
Query: 326 NKTSHAPYRSITVRDAISDLPRVSQG--ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLR 383
+T AP R +TVRDAI+DLP + G + P + FQ+ ++
Sbjct: 1153 PQTVGAPLRPVTVRDAIADLPEIENGHMVEEMEYVGGPVSAFQQHVRGDC---------- 1202
Query: 384 ELLQDHICKILSPLMEMRIRLIP-SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK 442
L DHI K ++ L R R IP + P ADWR L I VK G+ +
Sbjct: 1203 TQLTDHISKQMNELNLERCRCIPKNCPGADWRVLEEI-VKADPGREKF------------ 1249
Query: 443 SVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPW 502
KGQ ++PW L +TA R+N W+G+ GRL
Sbjct: 1250 -------------KGQ--PLVPWCLPNTADRHNGWRGLFGRL------------------ 1276
Query: 503 SLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQG 562
W+ F T T P P+ K G++ HPEQDR+++VRE ARAQG
Sbjct: 1277 -------------------DWNGHFPTSTTDPQPMGKVGQVFHPEQDRIVSVRECARAQG 1317
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
FPD + F G + + ++Q+GNAVPPPLA A+G ++ K +
Sbjct: 1318 FPDKHRFVGTVHNKHRQVGNAVPPPLAAALGRQLRKAL 1355
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 254/496 (51%), Gaps = 79/496 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASY--DANFQECSVIQDDCNLVL 174
PL D F G GGL GL Q+G+ W ++ + + A++ + NF C+ + N++
Sbjct: 424 PLLTFDAFCGAGGLSLGLEQSGLCDVKWGIDTDAAALATFSKNHNFSVCAYHEPLENMLD 483
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
K + + P+ +V+ +V GPPCQGFS N + EK+ K ++ +L C+
Sbjct: 484 KVVADPEQSY----YPRPGQVECLVGGPPCQGFSGCNFFPKGEKAGEKRQMMVEYLRMCE 539
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
++ PK ILENV + + + H LL + Y V V+Q+G YG+ QSR R++I+
Sbjct: 540 MYLPKLFILENVQNFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQAGMYGLPQSRRRLLIV 599
Query: 295 ASKPGYKLPS-FPQPLHAFSNQLFTINGNLVANKTSHAP---YRSITVRDAISDL--PRV 348
A++ + LP P LHAF+ + + + H +R+IT+R+AI DL +
Sbjct: 600 AARDDFPLPDMLPPQLHAFAPSALRLCNSTEKFEPLHVTVPIFRTITLREAIMDLQNTKS 659
Query: 349 SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
+ C T F R M+ ++H +H+ + LS + RI IP
Sbjct: 660 TFSTGC--------TWFTRKMRAPKQLH-----------NHVTRPLSLANQARIERIPYL 700
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQK-------NT 461
P ADWRDLPN+ VKLP GQ L Y +K SVC C S C K T
Sbjct: 701 PGADWRDLPNVSVKLPNGQ--VLHPLTYG--EKGSVCPCGSGERCLKDVHKANGTRPAET 756
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+IPW L HTA RN+NW G GRL +W G +G
Sbjct: 757 LIPWFLPHTAERNSNWVGCYGRL----------------------------DWNGYVG-- 786
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
T++T+P+P +KQG++LHP + R+LTVREYAR QGFPD+++F+G I D YKQIG
Sbjct: 787 -------TLLTSPDPAHKQGRLLHPSRQRILTVREYARIQGFPDTFIFQGAIEDTYKQIG 839
Query: 582 NAVPPPLAKAIGYEII 597
NAVPPPL+ A+G I+
Sbjct: 840 NAVPPPLSCAVGQRIL 855
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 281/548 (51%), Gaps = 99/548 (18%)
Query: 96 YILKIIHSKEF------------LPKFPMPLDTP----LKCLDLFSGCGGLMEGLCQAGV 139
Y +++ H K+F +P P P+D P + L++F+GCGGL GL ++GV
Sbjct: 1187 YFMQMYHDKKFTDIERNMYGCEDVPLDP-PIDYPDVDAMTSLEIFAGCGGLSLGLRESGV 1245
Query: 140 AKP--CWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHK-GVSLPQKHEVD 196
K W++E + A ++ N + +V+ ++VLK+ +KG + G LP+K +V+
Sbjct: 1246 IKKLGSWAIESDVDAANTFQLNNPDITVLVGHPDIVLKNAMKGEFEDSDGKLLPRKDDVE 1305
Query: 197 LIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE 256
+ A PC+ + + + + K+ + TFLS+CD ++P ILE L+ ++
Sbjct: 1306 FLCATLPCENYKTMT-----DITVFKHSYIATFLSYCDYYKPSLFILEADEKLI--KRSF 1358
Query: 257 ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL 316
+L+ CL+ M YQVTFD++Q G YG Q+R R V+L + P LP FP+ LH F L
Sbjct: 1359 VLKLTLACLVSMGYQVTFDLMQVGCYGAPQNRRRSVLLGAAPDSVLPKFPERLHVFPKPL 1418
Query: 317 FTINGNLVANK--------TSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTH-FQR 367
+ G ++ +K T APYRS+TV+DA+ DLP + ++ T F +
Sbjct: 1419 CEL-GIVIDSKKYTQDTFWTESAPYRSVTVQDALIDLPTTKVAITEEMNYDAKSTSLFSK 1477
Query: 368 MMKDGSRIHDIHINLRE-LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRG 426
+M+ +N+ E + +H+CK L PL+E RI IP +DWR+LPNI ++L
Sbjct: 1478 IMR---------LNMLEPTVFNHVCKDLGPLVECRISQIPLAVGSDWRNLPNIEMQL--K 1526
Query: 427 QHSYTEKLKYN-----AKKK-----KSVCDCKSSSSCTSKG-QKNTIIPWSLVHTASRNN 475
SY +KL YN A K + VC C S C + Q +IPW LVH+A +N
Sbjct: 1527 DESYAKKLIYNYDDVEAGKSSNGELRGVCSCASGERCDPRDRQHGCLIPWHLVHSARKNK 1586
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+W G+ RL WD F F+ +T P
Sbjct: 1587 HWAGIYSRLQWD-GF------------------------------------FNGAITNPQ 1609
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF--RGGICDMYKQIGNAVPPPLAKAIG 593
PL QG +LHP Q RV++VRE ARAQGFPD +V + GI +MY+ IG A P L +AIG
Sbjct: 1610 PLGTQGPVLHPTQPRVVSVRECARAQGFPDEFVLPQKIGIHNMYRIIGRASSPFLGRAIG 1669
Query: 594 YEIIKCIG 601
+EI + +
Sbjct: 1670 HEIARSLA 1677
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 213/342 (62%), Gaps = 20/342 (5%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC 170
P P + LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DC
Sbjct: 441 PKPKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 500
Query: 171 NLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++
Sbjct: 501 NVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSY 560
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
LS+CD ++PK+ +LENV V F + +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 561 LSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 620
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAI 342
R +ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +
Sbjct: 621 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTRGNGGIYRTITVRDTM 680
Query: 343 SDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
SDLP + GA ++ P++ FQR ++ G++ I L+DHICK +S L+E
Sbjct: 681 SDLPEIRNGAAALEISYNGEPQSWFQRQIR-GTQYQPI-------LRDHICKDMSALVEG 732
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK 442
R+R IP P +DWRDLPNI V+L G + T+KL+Y KK
Sbjct: 733 RMRYIPLAPGSDWRDLPNIEVRLKDG--TLTKKLRYTHHDKK 772
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 253/525 (48%), Gaps = 124/525 (23%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P L LD+F+GCGGL GL +AGV+ W++E E A ++ N + +V D+CN
Sbjct: 963 VPKGKRLATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCN 1022
Query: 172 LVLK------------------------------SLLKGHTQHKGVSLPQKHEVDLIVAG 201
++L+ L +++ +LP +VD I G
Sbjct: 1023 VILRISWLRLLINDRAIMEKCGDVDDCISTTEAAELATKLDENQKSTLPLPGQVDFISGG 1082
Query: 202 PPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCI 261
PPCQGFS+LNR + SK + ++ FLSF D F+PKY +LENV V FN+
Sbjct: 1083 PPCQGFSRLNRFSDGSWSKNQCQMILAFLSFADYFRPKYFLLENVKTFVSFNEGHTFHLT 1142
Query: 262 FHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI-- 319
LL+M YQV F +L++G YG++Q R R I A+ P LP +P+P+H F+N F I
Sbjct: 1143 VASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPGFKIPL 1202
Query: 320 ----NGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRI 375
+ V + AP+RSITVRDAI DLP + G + K + + M GS
Sbjct: 1203 SQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGES--------KINKEEMR--GSMT 1252
Query: 376 HDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLK 435
+L DHICK ++ L +R + IP P ADWRDLP+ V L
Sbjct: 1253 ---------VLTDHICKKMNELNLIRCKKIPKTPGADWRDLPDEHVNL------------ 1291
Query: 436 YNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQ 495
S G I+P +L++ A +N ++G+ GRL
Sbjct: 1292 -------------------SNGIVKNIVP-NLLNKAKDHNGYKGLYGRL----------- 1320
Query: 496 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVR 555
+W G L T +T P+ G HP+QDR+++VR
Sbjct: 1321 -----------------DWHGNL---------PTCITNLQPMGLVGMCFHPDQDRIISVR 1354
Query: 556 EYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
E AR+QGFPDSY F G I D ++Q+GNAVPPPLA A+G ++ + +
Sbjct: 1355 ECARSQGFPDSYKFSGNIKDKHRQVGNAVPPPLAFALGRKLKEAL 1399
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 248/510 (48%), Gaps = 105/510 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL GL Q+G + W++E E ++ N E V ++CN++L+++
Sbjct: 1124 LATLDIFAGCGGLSNGLRQSGASITKWAIEYEEPAGDAFKLNHPESLVFINNCNVILRAV 1183
Query: 178 LK--GHT-----------------QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ G T + LP +VD I GPPC+GFS +NR +
Sbjct: 1184 MEKCGDTDDCIATSEAAELAASLDEEVKNDLPLPGQVDFINGGPPCRGFSGMNRFTQSPW 1243
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
K +++ L+F D F+PK LENV V FNK + Q LL+M YQV F +L+
Sbjct: 1244 IKFHCKMIWACLAFADYFRPKLFPLENVRKFVSFNKGQTFQLTLASLLEMGYQVRFGILE 1303
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAP 332
+G YG++QSR R I A+ P LP +P+P+H F I+ + V + AP
Sbjct: 1304 AGAYGISQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAP 1363
Query: 333 YRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+R ITVRD I DLP V G + + + FQ+ ++ G+ I L DHI
Sbjct: 1364 FRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIR-GNTI---------ALTDHI 1413
Query: 391 CKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSS 450
CK ++ L +R +LIP+ P ADW DLP V L
Sbjct: 1414 CKAMNELNLIRCKLIPTRPGADWHDLPKRKVTL--------------------------- 1446
Query: 451 SSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
S G+ + P+ L +TA R+N W+G+ GRL
Sbjct: 1447 ----SDGRVEEMTPFCLPNTAERHNGWKGLYGRL-------------------------- 1476
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+WQG +F T VT P P+ K G H EQ R+LTVRE AR+QGFPDSY F
Sbjct: 1477 --DWQG---------NFPTSVTDPQPMGKVGMCFHLEQHRILTVRECARSQGFPDSYEFA 1525
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G I ++QIGNAVPP LA A+G ++ + I
Sbjct: 1526 GNINHKHRQIGNAVPPTLAYALGTKLKEAI 1555
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 248/524 (47%), Gaps = 122/524 (23%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +D+F+GCGGL EGL +AG A+ W++E E+ A ++ N + +CN++L +
Sbjct: 1 LATMDIFAGCGGLSEGLHRAGAARTKWAIEYEQPAAEAFKVNNPDAVTWCCNCNVLLTAA 60
Query: 178 LKGHTQ-------------------HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ +LP EVD + GPPCQG+S +NR +
Sbjct: 61 MTKAGAADFCDASEEAKEQAAKLDAETVATLPAPGEVDFLCGGPPCQGYSGMNRFNKGTW 120
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-------- 270
S ++N +V +LS+ D ++P+Y +LENV V NK+ + LL M Y
Sbjct: 121 SLVQNSMVMAYLSYADFYRPRYFLLENVRNFVSHNKSHAFRLTLRSLLDMGYQARLLISI 180
Query: 271 ----------QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN 320
QV F VL +GN+GV+QSR R I P +LP +P PLH F + TI
Sbjct: 181 PLALGIWECEQVRFGVLNAGNFGVSQSRKRTFIWGVAPDNELPQWPAPLHVFHSPQLTIK 240
Query: 321 --GNL---VANKTSHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGS 373
G + K S AP R++TV+DAI DLP ++ GAN + PP + FQ+ ++ G
Sbjct: 241 LPGGVEYTAVPKGSGAPLRTVTVKDAIGDLPPLTNGANLEDMQYAGPPISAFQKAIRGGC 300
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIP-SFPNADWRDLPNICVKLPRGQHSYTE 432
+ L DHICK ++ L R R IP + P ADWR L I P
Sbjct: 301 TV----------LHDHICKEMNELNLERCRCIPKNTPGADWRVLQEIVAANP-------- 342
Query: 433 KLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDM 492
+ ++PW L +TA R+N W+G+ GRL D
Sbjct: 343 ----------------------DRTLFKPLVPWCLPNTADRHNGWRGLFGRL------DY 374
Query: 493 TGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVL 552
G F T VT P P+ K G++ HP+QDR++
Sbjct: 375 GGH-------------------------------FPTSVTDPQPMGKVGQVFHPDQDRIV 403
Query: 553 TVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+VRE ARAQGFPDS+ F G + + ++QIGNAVP PLA A+G ++
Sbjct: 404 SVRECARAQGFPDSFRFYGNVHNKHRQIGNAVPVPLAYALGRQL 447
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 275 bits (703), Expect = 5e-71, Method: Composition-based stats.
Identities = 171/515 (33%), Positives = 254/515 (49%), Gaps = 107/515 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS- 176
L +D+F+GCGGL EG QAGVA+ W++E +R A ++ N +V D+CN++L++
Sbjct: 1726 LPTMDIFAGCGGLSEGFHQAGVAESRWAIEYDREAADAFKLNNPHTTVFCDNCNVLLRAA 1785
Query: 177 LLKGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++K + VS LP V L++ GPPCQG+S +NR
Sbjct: 1786 MVKAGLEADCVSDPAAVEAARRLDPQVVADLPAPGAVGLMMGGPPCQGYSGMNRFNTGMW 1845
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
S+++N +V + S+CD ++P+Y +LENV V +N + + + LL++ YQV F VL
Sbjct: 1846 SQVQNSMVMAYTSYCDFYRPRYFLLENVRNFVAYNDGRVFRLVVRTLLELGYQVRFGVLN 1905
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN--------------QLFTINGNLV 324
+G +GV+QSR R I A+ PG LP +P LH F Q F +G
Sbjct: 1906 AGCFGVSQSRKRTFIWAALPGELLPDWPAALHRFKQEQLGVRMRGVGGDGQFFHASGPPA 1965
Query: 325 ANKTSHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINL 382
A AP R++TVRD I DLP V G+ + P + FQR ++ + N
Sbjct: 1966 AG----APLRTVTVRDVIGDLPPVENGSTTDPLPYTGQPVSAFQRAIRGRAAAGGGGGNG 2021
Query: 383 RELLQDHICKILSPLMEMRIRLIPSF-PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKK 441
++DH+ K ++ L R R IP P ADWR L LK A+ +
Sbjct: 2022 E--VRDHVVKAMNALNLERCRCIPKGDPGADWRVL-----------------LKLVAEDR 2062
Query: 442 KSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIP 501
S GQ ++PW L ++A R+N W+G+ RL P
Sbjct: 2063 ---------SREFFNGQ--ALVPWCLPNSADRHNGWRGLYSRLD---------------P 2096
Query: 502 WSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQ 561
D F T T PNP+ K G++ HP+QDR+++VRE AR+Q
Sbjct: 2097 ----------------------DGHFPTATTDPNPMGKVGQVFHPDQDRIVSVRECARSQ 2134
Query: 562 GFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
GFPD + F G + ++Q+GNAVPPPLA+A+G ++
Sbjct: 2135 GFPDHFRFYGNVVCRHRQVGNAVPPPLARALGQKL 2169
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 228/443 (51%), Gaps = 88/443 (19%)
Query: 168 DDCNLVLKSLLKGH--TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
DDC ++ + ++ K +LP EV+ I GPPCQGFS +NR + SK++ +
Sbjct: 8 DDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEM 67
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
+ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L++G YGVA
Sbjct: 68 ILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVA 127
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVA---NKTSHAPYRSITVR 339
QSR R I A+ PG LP +P+P+H F++ I +G A + + AP+RSITVR
Sbjct: 128 QSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVR 187
Query: 340 DAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
D I DLP V GA + + P + FQ+ ++ L DHI K ++ L
Sbjct: 188 DTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDM----------ASLNDHISKEMNEL 237
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
+R + IP P DW DLP+ VKL S G
Sbjct: 238 NLIRCKHIPKRPGCDWHDLPDEKVKL-------------------------------STG 266
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
Q +IPW L +TA R+N W+G+ GRL +W+G
Sbjct: 267 QMVDLIPWCLPNTAKRHNQWKGLYGRL----------------------------DWEG- 297
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
+F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY F G I + +
Sbjct: 298 --------NFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNKH 349
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+QIGNAVPPPLA A+G ++ + I
Sbjct: 350 RQIGNAVPPPLAYALGRKLKQAI 372
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 252/543 (46%), Gaps = 133/543 (24%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVA----------------------KPCWSVELE 149
+P + PL LD+F+GCGGL GL AG+ C V L
Sbjct: 1072 VPKEKPLATLDIFAGCGGLSHGLENAGMYLYSHVMHILLSSKHLKTFIKMHVLCNKVYLL 1131
Query: 150 RSEAASYDANF----------------------QECSVIQDDCNLVLKS--LLKGHTQHK 185
+S +S + ++C + DDC +++ L +++
Sbjct: 1132 QSGRSSMKSQLVMRLNKTILKQRFLLTTAMAIMEKCGDV-DDCVSTVEAAELAAKLDENQ 1190
Query: 186 GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILEN 245
+LP +VD I GPPCQGFS +NR SK++ ++ FLSF D F+PKY +LEN
Sbjct: 1191 KSTLPLPGQVDFINGGPPCQGFSGMNRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLEN 1250
Query: 246 VTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSF 305
V V +NK Q LL+M YQV F +L++G YGV+Q R RV+I A+ P LP +
Sbjct: 1251 VKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEW 1310
Query: 306 PQPLHAFSNQLFTIN------GNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY--LF 357
P+P+H F N I+ + N AP+RSITVRD I DLP V G + +
Sbjct: 1311 PEPMHVFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEY 1370
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P + FQ+ ++ + L DHICK L+ L +R + IP P ADWRDLP
Sbjct: 1371 GTTPASWFQKKIRGNMSV----------LTDHICKGLNELNLIRCKKIPKRPGADWRDLP 1420
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNW 477
+ V L G EKL+ P +L TA +N W
Sbjct: 1421 DENVTLSNG---LVEKLR----------------------------PLALSKTAKNHNEW 1449
Query: 478 QGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPL 537
+G+ GRL +WQG L +T P P+
Sbjct: 1450 KGLYGRL----------------------------DWQGNL---------PISITDPQPM 1472
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
K G HPEQDR++TVRE AR+QGFPDSY F G ++QIGNAVPPPLA A+G ++
Sbjct: 1473 GKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLK 1532
Query: 598 KCI 600
+ +
Sbjct: 1533 EAL 1535
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 220/422 (52%), Gaps = 86/422 (20%)
Query: 188 SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVT 247
+LP +VD I GPPCQGFS +NR + SK++ ++ FLSF D F+P++ +LENV
Sbjct: 30 NLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPRFFLLENVR 89
Query: 248 GLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQ 307
V FNK + + LL+M YQV F +L++G YGV+QSR RV I A+ P LP +P+
Sbjct: 90 NFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPEWPE 149
Query: 308 PLHAFS--NQLFTINGNL----VANKTSHAPYRSITVRDAISDLPRVSQGAN--CYLFHN 359
P+H F+ T++ N+ V + + AP+R+ITVRD I DLP V+ GA+ + N
Sbjct: 150 PMHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLEYQN 209
Query: 360 PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNI 419
P + FQ+ ++ + L DHI K ++ L +R + IP P ADWR LP+
Sbjct: 210 GPVSWFQKKIRGNMMV----------LTDHISKEMNELNLIRCQKIPKQPGADWRSLPDE 259
Query: 420 CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQG 479
V L S GQ +IPW L +TA R+N W+G
Sbjct: 260 KVAL-------------------------------STGQVVDLIPWCLPNTAKRHNQWKG 288
Query: 480 VLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK 539
+ GRL W + +F T +T P P+ K
Sbjct: 289 LFGRLDW-------------------------------------EGNFPTSITDPQPMGK 311
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
G HP QDR+++VRE AR+QGFPDSY F G I ++QIGNAVPPPLA A+G ++ +
Sbjct: 312 VGMCFHPXQDRLVSVRECARSQGFPDSYKFSGNIQHKHRQIGNAVPPPLAFALGRKLKEA 371
Query: 600 IG 601
+G
Sbjct: 372 VG 373
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 218/421 (51%), Gaps = 86/421 (20%)
Query: 188 SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVT 247
+LP EV+ I GPPCQGFS +NR + SK++ ++ FLSF + F+P++ +LENV
Sbjct: 30 NLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVR 89
Query: 248 GLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQ 307
V FNK + + LL+M YQV F +L++G +GVAQSR R I A+ PG LP +P+
Sbjct: 90 NFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWPE 149
Query: 308 PLHAFSNQLFTI---NGNLVANKTS---HAPYRSITVRDAISDLPRVSQGAN--CYLFHN 359
P+H F++ I +G A S AP+R+ITVRD I DLP+V GA+ +
Sbjct: 150 PMHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVGNGASKLTLEYGG 209
Query: 360 PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNI 419
P + FQ+ ++ + L DHI K ++ L +R + IP P DW DLP+
Sbjct: 210 EPVSWFQKKIRGNMMV----------LNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDE 259
Query: 420 CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQG 479
VKL S GQ +IPW L +TA R+N W+G
Sbjct: 260 KVKL-------------------------------SNGQMADLIPWCLPNTAKRHNQWKG 288
Query: 480 VLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK 539
+ GRL W + +F T VT P P+ K
Sbjct: 289 LYGRLDW-------------------------------------EGNFPTSVTDPQPMGK 311
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
G HP+QDR++TVRE AR+QGFPDSY F G I + ++QIGNAVPPPLA A+G ++ +
Sbjct: 312 VGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEA 371
Query: 600 I 600
+
Sbjct: 372 V 372
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 246/498 (49%), Gaps = 69/498 (13%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL +D+FSGCGGL GLC AG+ W+++ + AN + I+ D + L +
Sbjct: 275 PLHTMDVFSGCGGLSLGLCDAGLCDVRWAIDNWPVALDALKANHANATTIEADVGVALHA 334
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L + T P EV+ +V GPPCQG+S LNR +K KN LV +++ +
Sbjct: 335 LQESGTMSH--PWPAVGEVECMVGGPPCQGYSILNRFPHAHSTKAKNTLVNLYIALALYY 392
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P +I+ENV L + K +L + L Y V ++LQ+G+YGV Q+R RV+++A+
Sbjct: 393 KPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNILQAGHYGVPQTRQRVIVVAT 452
Query: 297 KPGYKLPSFPQP-LHAFSNQLFTINGNLV-------------ANKTSHAPYRSITVRDAI 342
P LP P P LHAFS++ + + N ++ AP+R+IT+ +A
Sbjct: 453 LPN-ALPEGPPPALHAFSHKACNLTLPMSPHGAGRSMRYLCGPNPSAAAPFRTITLAEAF 511
Query: 343 SDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
S L V+ + C + P + + R + H + + + RI
Sbjct: 512 SGLAEVTT-SPC---PSGPMSWYARAIAKSEGAPCFHES----------RSFEWINNERI 557
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI 462
+P+ P ADWRD+PN P G + + KL+Y +K VC C+ + T+
Sbjct: 558 ASVPAVPGADWRDIPNEERTSPDGTVTLS-KLRYIDEKLGIVCPCQLDKTAPHVKHGKTL 616
Query: 463 IPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLA 522
+PW L H AS N + G+ GR N+ G L
Sbjct: 617 VPWWLPHKASSKNGYAGLYGR----------------------------NDMSGFL---- 644
Query: 523 WDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGN 582
T++T P P NKQG++LHP Q RVL+ RE AR QGFPDSYV +G + D+YKQ+GN
Sbjct: 645 -----STVLTNPMPGNKQGRVLHPRQPRVLSARESARGQGFPDSYVLKGALLDVYKQVGN 699
Query: 583 AVPPPLAKAIGYEIIKCI 600
AVPPP+A+AIG I +
Sbjct: 700 AVPPPMARAIGLRIASAL 717
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 230/472 (48%), Gaps = 105/472 (22%)
Query: 129 GLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK--------- 179
GL EGL ++GV+ W++E E ++ N E V +CN++L+++++
Sbjct: 1 GLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAVMQKCGDAEDCI 60
Query: 180 ----------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
+++ SLP +VD I GPPCQGFS +NR + SK++ ++ F
Sbjct: 61 STSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAF 120
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
LSF D ++PK+ +LENV V FN+ + + LL+M YQV F +L++G +GV QSR
Sbjct: 121 LSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRK 180
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANKTSHAPYRSITVRDAIS 343
R I A+ P LP +P+P+H F I + V + S AP+RS+TVRD I
Sbjct: 181 RAFIWAASPEEILPEWPEPMHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIG 240
Query: 344 DLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP V GA+ C + P + FQR ++ S L DHI K ++ L +R
Sbjct: 241 DLPAVGNGASKTCIEYQVDPISWFQRKIRGNSIT----------LSDHITKEMNELNLIR 290
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
+ IP P ADWRDLP+ VKL C+ GQ
Sbjct: 291 CQRIPKRPGADWRDLPDEKVKL---------------------CN----------GQLVD 319
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+IPW L +TA R+N W+G+ GRL W
Sbjct: 320 LIPWCLPNTAKRHNQWKGLFGRLDW----------------------------------- 344
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
D +F T +T P P+ K G HP+QDR++TVRE AR+QGFPDSY F G I
Sbjct: 345 --DGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 394
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/384 (40%), Positives = 209/384 (54%), Gaps = 67/384 (17%)
Query: 212 RARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQ 271
R + S KN L+ ++LS+CD ++P+Y ILENV V F ++ +L+ CL KM YQ
Sbjct: 1 RFNSRQYSLFKNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMGYQ 60
Query: 272 VTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANK---- 327
TF +LQ+GNYGV Q+R R ILA+ PG LP+FP+P H FS + ++ + NK
Sbjct: 61 CTFGILQAGNYGVPQTRRRAXILAAAPGEVLPNFPEPTHXFSPRACQLSVVVDENKFTSN 120
Query: 328 ---TSHAPYRSITVRDAISDLPRVSQG--ANCYLFHNPPKTHFQRMMKDGSRIHDIHINL 382
AP R+ITVRD++SDLP + G + P THFQR+++
Sbjct: 121 CKWVDSAPRRTITVRDSMSDLPEIRNGHKKEEMSYGGEPLTHFQRLVRGN--------QY 172
Query: 383 RELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK 442
+ +L+DHICK ++P++E RI IP+ +DWRDLPNI V+L G SYT+KL Y KK
Sbjct: 173 QPILRDHICKEMAPIIEARIANIPTGVGSDWRDLPNIVVRLSDG--SYTKKLIYTHHDKK 230
Query: 443 S----------VCDCKSSSSCTS-KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFD 491
+ VC C + C Q NT+IPW L HT +R N+W G+ GRL W
Sbjct: 231 NGRSSTGALRGVCACATGKPCDPMDKQTNTLIPWCLPHTGNRXNHWAGLYGRLEW----- 285
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRV 551
D F T VT P P+ KQG++LHPEQ RV
Sbjct: 286 --------------------------------DGFFSTTVTNPEPMGKQGRVLHPEQTRV 313
Query: 552 LTVREYARAQGFPDSYVFRGGICD 575
++VRE AR+QGFPD+Y F G I +
Sbjct: 314 VSVRECARSQGFPDTYRFFGSITE 337
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 210/380 (55%), Gaps = 26/380 (6%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH- 181
+F+ G+ GL GV+ W++E A ++ NF + +V DCN LK +L+G
Sbjct: 8 VFASSTGISCGLEAVGVSDTLWAIESLEVAARAFSLNFPKATVFVQDCNSFLKEVLEGQE 67
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
T KG P+K EVD + GPPCQG+S LNR R S+LKN LV T LS CD ++P++
Sbjct: 68 TNAKGQRFPKKGEVDFLCGGPPCQGYSLLNRHRGNWNSRLKNSLVSTLLSLCDYYRPRFF 127
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV + K ++Q LL++ YQ F VLQ+G+YG+ Q R R+VILA+ PG
Sbjct: 128 LMENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVLQAGSYGLPQDRKRLVILAAAPGEL 187
Query: 302 LPSFPQPLHAF-SNQLFTINGNLVANKT---SHAPYRSITVRDAISDLPRVSQGANCYLF 357
LP FP+P +F SN T+ G T + AP R++T+RDAISDL + + F
Sbjct: 188 LPKFPEPKTSFPSNNFVTVKGKKFGPTTTWCTSAPLRTVTLRDAISDLASLEPSDSASSF 247
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P + +QRM+K S R ++DH+ K+L+PL++ R+ IP P A+WR LP
Sbjct: 248 SE-PMSCYQRMLKGDS---------RGPIRDHVPKLLTPLVQARVDHIPKVPRANWRSLP 297
Query: 418 NICVKLPRGQHSYTEKLKYNA--KKKKSVCDCKSSSSCTSKG--QKNTIIPWSLVHTASR 473
NI + L G+ YT KL Y + + VC C + +C + Q T+IPW LVH R
Sbjct: 298 NIKLLLRNGK--YTRKLVYRSFGRGVSGVCPCAAGKACRREAMLQHRTLIPWRLVHRDER 355
Query: 474 NN-----NWQGVLGRLAWDE 488
N + + R WD+
Sbjct: 356 QNARPHADIEQAYSRPHWDD 375
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 208/417 (49%), Gaps = 83/417 (19%)
Query: 188 SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVT 247
+LP+ +VD I GPPCQGFS +NR + + SK++ ++ FLSF D F+P++ +LENV
Sbjct: 31 NLPRPGQVDFINGGPPCQGFSGMNRFNQGKWSKMQCEMILAFLSFADYFRPRFFLLENVR 90
Query: 248 GLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQ 307
V FNK + + LL+M YQV F VL++G YGV QSR R I A+ P LP +P+
Sbjct: 91 NFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWPE 150
Query: 308 PLHAFSNQLFTINGNLVANKT-SHAPYRSITVRDAISDLPRVSQGANCYLFHNPPK---T 363
P+H F IN T + P+R+ITVRDAI DLP + GA C P+ +
Sbjct: 151 PMHVFPGPELKINNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGA-CETTMEYPREASS 209
Query: 364 HFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKL 423
+QR + D+ I L DHI K ++ L +R + IP P ADW + N V+L
Sbjct: 210 WYQRKFRG-----DMSI-----LTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRL 259
Query: 424 PRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGR 483
S G+ ++P L + R+N W+GVLGR
Sbjct: 260 -------------------------------SSGRIAKLLPSWLTNKGKRHNQWKGVLGR 288
Query: 484 LAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKI 543
L W+ F T +T P PL K G
Sbjct: 289 L-------------------------------------DWEGHFPTSITNPQPLGKVGMC 311
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
HP+QDR+L+VRE AR QGFPD Y F G + ++Q+GNAVPPPLA A+G ++ + +
Sbjct: 312 FHPDQDRILSVRECARTQGFPDXYKFSGQMHHKHRQVGNAVPPPLAFALGRKLKEAV 368
>gi|405957557|gb|EKC23761.1| DNA (cytosine-5)-methyltransferase 1, partial [Crassostrea gigas]
Length = 993
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 218/394 (55%), Gaps = 26/394 (6%)
Query: 1 MKAHVQWLVRPNDTILGDKIQF--DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEE 58
+K V RP DT G + D + L+ ++ ++D ++K V + N S EE
Sbjct: 599 IKVKVAKFYRPEDTHKGPSAGYHTDMNMLYWSDEEATVDFKLVKGKCQVTYSENLRSLEE 658
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQP--NARPLELAYILKII--------HSKEFLP 108
L D +TE Y ++ K F +P AR K ++E
Sbjct: 659 YLCGGL---DRFYFTEAY-DSETKMFEEPPRQARVSGGKGKGKGKGKGKSSGPSAEEETT 714
Query: 109 KFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
+ P L+ LD+F+GCGG+ EG QAG+A+ CW++E E ++ N C+V D
Sbjct: 715 EPKKPTYRRLRTLDVFAGCGGISEGFHQAGIAESCWAIEKEEPAGQAFRLNNPGCTVFTD 774
Query: 169 DCNLVLKSLLKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
DCN++LK +++G Q++ G LPQK +V+L+ GPPCQGFS +NR E S+ KN L+
Sbjct: 775 DCNVLLKLVMEGEKQNEMGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSRFKNSLIA 834
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
++LS+CD ++P++ +LENV V F ++ +L+ CL M YQ TF VLQ+G+YGV Q+
Sbjct: 835 SYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALRCLTTMGYQCTFGVLQAGSYGVPQT 894
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTI-----NGNLVANKT--SHAPYRSITVRD 340
R R +ILA+ PG KLP FP+P H F+ + + + ++N T AP+R+ITVRD
Sbjct: 895 RRRAIILAAAPGEKLPFFPEPQHVFAPRAMQLSVQVDDKKFMSNITRMESAPFRTITVRD 954
Query: 341 AISDLPRVSQGANC--YLFHNPPKTHFQRMMKDG 372
+SDLP + GA + P++HFQR+ G
Sbjct: 955 TMSDLPEIRNGAKAEEISYQGDPQSHFQRIRLSG 988
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDL-SVIKKTVCVDFVTNDSSEEEILDN 62
HVQWL R +DTILG+ D LF + CESI L S ++K V + ++S + +
Sbjct: 371 HVQWLCRGSDTILGE--TGDPLELFFVDDCESIKLESSLRK---VKVLHKETSPDWFMQG 425
Query: 63 --EHEEKDETIY----TEYYRKTKD 81
EH EKD I T YY+K D
Sbjct: 426 GIEHPEKDFPIEDDSNTFYYQKWYD 450
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 172/269 (63%), Gaps = 11/269 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1311
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVS 349
PG KLP +P+PLH FS + +++ + K APYR+ITVRD++SDLP ++
Sbjct: 1312 APGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITVRDSMSDLPTIN 1371
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIH 376
GA + P++ FQ+ ++ G + H
Sbjct: 1372 NGAQKLEISYDGEPQSDFQKKIR-GKQYH 1399
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 199/356 (55%), Gaps = 27/356 (7%)
Query: 144 WSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGP 202
W++E+ A ++ N +V +DCN++LK ++ G T G LPQK +V+++ GP
Sbjct: 2 WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGP 61
Query: 203 PCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIF 262
PCQGFS +NR SK KN LV +FLS+CD ++P++ +LENV V F ++ +L+
Sbjct: 62 PCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTL 121
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI 319
CL++M YQ F VLQ+G YGVAQ+R R +ILA+ PG KLP FP+PLH F+ QL +
Sbjct: 122 RCLVRMGYQCIFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVV 181
Query: 320 --NGNLVANKT--SHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRI 375
+ V+N T S P+R+IT+RD +SDLP + GA+ P+ ++
Sbjct: 182 VDDKKFVSNITRLSSGPFRTITMRDTMSDLPEIQNGASA------PEISYKWRATVLVPE 235
Query: 376 HDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLK 435
+ L Q ++ R+R IP P +DWRDLPNI V+L G T KL+
Sbjct: 236 AAARVALPAHPQGPYPQVHERAGGCRMRHIPLSPGSDWRDLPNIQVRLRDG--VITNKLR 293
Query: 436 YNAKKKKS----------VCDCKSSSSCT-SKGQKNTIIPWSLVHTASRNNNWQGV 480
Y K+ VC C +C + Q NT+IPW L HT +R+N+W G+
Sbjct: 294 YTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTGNRHNHWAGL 349
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 157/239 (65%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1311
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRV 348
PG KLP +P+PLH FS + +++ + K APYR+ITVRD++SDLP +
Sbjct: 1312 APGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITVRDSMSDLPTI 1370
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 238 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 297
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 298 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 357
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 358 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 417
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 418 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 477
Query: 350 QGANC 354
GA+
Sbjct: 478 NGASA 482
>gi|380019136|ref|XP_003693470.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial [Apis
florea]
Length = 298
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 183/333 (54%), Gaps = 69/333 (20%)
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANK--------TSHAPYRSITVRDAI 342
++ILA+ PG LP +P+P H FS + ++ +V NK APYR+I+VRDA+
Sbjct: 1 LIILAAAPGEVLPKYPEPTHVFSKRACQLS-VIVDNKKYSSNCDWIESAPYRTISVRDAM 59
Query: 343 SDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
SDLP + G N + + P +HFQR ++ +L+DHICK ++PL+E
Sbjct: 60 SDLPNIRNGWNNEEIAYSDEPISHFQRKIRPKEP--------DAILRDHICKDMAPLVEA 111
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK----------SVCDCKSS 450
RI IP+ +DWRDLPNI V+L G +Y++KL+Y KK VC C +
Sbjct: 112 RIAHIPTASGSDWRDLPNIAVRLSDG--TYSKKLEYMYHDKKVGKSSSGALRGVCSCCTG 169
Query: 451 SSCTSKG-QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS 509
C Q NT+IPW L HT R+N+W G+ GRL WD
Sbjct: 170 KMCDPIARQYNTLIPWCLPHTGKRHNHWAGLYGRLEWD---------------------- 207
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
G G T +T P P+ KQG++LHPEQ RV++VRE AR+QGFPDS+ F
Sbjct: 208 ------GFFG---------TTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRF 252
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G I D ++QIGNAVPPPL A+G+EI KC+ N
Sbjct: 253 YGNILDKHRQIGNAVPPPLGAALGFEIRKCLKN 285
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 247/571 (43%), Gaps = 171/571 (29%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL GL +G W +E S A + NF + V N++L
Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGAVDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLLSRA 843
Query: 178 LKGHTQH--------KGV---SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLV 226
++ + +G LP+K EVD I GPPCQGFS +NR ++ + +KN LV
Sbjct: 844 IQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFSGVNRYKK--GNDIKNSLV 901
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFN---------------KNEILQCIFHCLLKMNYQ 271
TFLS+ D ++P++++LENV GL+ N +++ I+ L+ MNYQ
Sbjct: 902 ATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQ 961
Query: 272 VTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH- 330
++QSG YGV QSR RV+ LA++ G +LP P+P+HAF ++ L K H
Sbjct: 962 CRIGLVQSGEYGVPQSRPRVIFLAARMGERLPDLPEPMHAF--EVLDSQYALPHIKRYHT 1019
Query: 331 -----APYRSITVRDAISDLPR-------------------------------VSQGAN- 353
AP IT+ +A+SDLP+ VS+ +
Sbjct: 1020 TQNGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDPYSSAKAQPSDKTIEKFSVSKATSF 1079
Query: 354 -CYL---FHNPPKTHFQRMMKDGSRIHD-----IHINLRELLQDHICKILSPLMEMRIRL 404
YL +H+ P++ FQR ++ D + +L+ H+ ++ + RI
Sbjct: 1080 VGYLLQPYHSRPQSEFQRRLRTKLVPSDEPAEKTSLLTTKLVTAHVTRLFNKETTQRIVC 1139
Query: 405 IPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
+P +P AD R LP + P
Sbjct: 1140 VPMWPGADHRSLP------------------------------------------KEMRP 1157
Query: 465 WSLV---HTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
W LV A ++ W G+ GRL E F
Sbjct: 1158 WCLVDPNSQAEKHRFWPGLFGRLGM-EDF------------------------------- 1185
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR--------GGI 573
F T +T P KQGK+LHP Q RV TVRE ARAQGFPD + F GG+
Sbjct: 1186 -----FSTALTDVQPCGKQGKVLHPTQRRVYTVRELARAQGFPDWFAFTDGDADSGLGGV 1240
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
++ IGNAVP PL + IG +CIG +V
Sbjct: 1241 KKWHRNIGNAVPVPLGEQIG----RCIGYSV 1267
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 248/571 (43%), Gaps = 171/571 (29%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK LD+F+GCGGL GL +G W++E S A + NF + V N++L
Sbjct: 784 LKGLDIFAGCGGLTLGLDLSGAVDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLLSRA 843
Query: 178 LKGHTQH--------KGV---SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLV 226
++ + +G LP+K EVD I GPPCQGFS +NR ++ + +KN LV
Sbjct: 844 IQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFSGVNRYKK--GNDIKNSLV 901
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFN---------------KNEILQCIFHCLLKMNYQ 271
TFLS+ D ++P++++LENV GL+ N +++ I+ L+ MNYQ
Sbjct: 902 ATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQ 961
Query: 272 VTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH- 330
++QSG YGV QSR RV+ LA++ G +LP P+P+HAF ++ L K H
Sbjct: 962 CRIGLVQSGEYGVPQSRPRVIFLAARMGERLPDLPEPMHAF--EVLDSQYALPHIKRYHT 1019
Query: 331 -----APYRSITVRDAISDLPR-------------------------------VSQGAN- 353
AP IT+ +A+SDLP+ VS+ +
Sbjct: 1020 TQNGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDPYSSAKAQPSDKTIEKFSVSKATSF 1079
Query: 354 -CYL---FHNPPKTHFQRMMK-----DGSRIHDIHINLRELLQDHICKILSPLMEMRIRL 404
YL +H+ P++ FQR ++ + + +L+ H+ ++ + RI
Sbjct: 1080 VGYLLQPYHSRPQSEFQRRLRTKLVPSDDPAEEPSLLTTKLVTAHVTRLFNKETTQRIVC 1139
Query: 405 IPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
+P +P AD R LP + P
Sbjct: 1140 VPMWPGADHRSLP------------------------------------------KEMRP 1157
Query: 465 WSLV---HTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
W LV A ++ W G+ GRL E F
Sbjct: 1158 WCLVDPNSQAEKHRFWPGLFGRLGM-EDF------------------------------- 1185
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR--------GGI 573
F T +T P KQGK+LHP RV TVRE ARAQGFPD + F GG+
Sbjct: 1186 -----FSTALTDVQPCGKQGKVLHPTPRRVYTVRELARAQGFPDWFAFTDDDADSGLGGV 1240
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
+ ++ IGNAVP PL + IG +CIG +V
Sbjct: 1241 KEWHRNIGNAVPVPLGEQIG----RCIGYSV 1267
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 247/598 (41%), Gaps = 177/598 (29%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL-KSLL 178
+D+F+G GGL GL Q+GVA ++VE + + AA++ AN +V + DC+++L +++
Sbjct: 1092 AMDIFAGAGGLSLGLHQSGVADTRYAVEFDTAAAAAFRANHPGVAVHRLDCSVMLTAAMV 1151
Query: 179 KGHTQHKGVS------------------------------------LPQKHEVDLIVAGP 202
+ + V+ LP VDL+V GP
Sbjct: 1152 QAGARDNCVAAPEVMAEAEALLQRQQQQQQGQQQGQQEEGQPPPEALPGPGAVDLLVGGP 1211
Query: 203 PCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIF 262
PCQGFS +NR E S LK ++ +LS+ D +P+Y +LENV +
Sbjct: 1212 PCQGFSGMNRDNGSEGSVLKKSMIKAYLSYADFLRPRYFLLENVRNFAAHEGGRYFRLAL 1271
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI--- 319
LL M YQV VL + ++GV QSR+R I A+ PG +LP +PQPLHAF + + ++
Sbjct: 1272 RSLLDMGYQVRVGVLNAAHHGVPQSRSRTFIWAALPGERLPHWPQPLHAFDHTMLSLPVP 1331
Query: 320 ------------------NGNLVAN-----------------------KTSHAPYRSITV 338
N N+ AP R +TV
Sbjct: 1332 VPAWVLEHPDCVAALQRDNANVTVQDRGGRGDGGGEGVATLRYWAASPAAGGAPLRPVTV 1391
Query: 339 RDAISDLPRVSQGAN-----CYLFHNPPKTHFQRMMKDGSRIHDIHINLR---------- 383
DA+SDL V + + P+T FQR ++ D+ L
Sbjct: 1392 WDAVSDLAPVDNADGNDWRRVAPYGSAPQTPFQRAIRGAGVGVDVEAALGEGAGGSDGGG 1451
Query: 384 -----------------ELLQDHICKILSPLMEMRIRLIP-SFPNADWRDLPNICVKLPR 425
L+ DH+ K + E R IP P ADW L ++ P
Sbjct: 1452 GVAGAVSVALDESAASAALVSDHVPKRMQ--RENYTRHIPKDTPGADWHSLYDVVAADP- 1508
Query: 426 GQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLA 485
E + K K ++P +L +A R+N W+G+ GRL
Sbjct: 1509 ----SLELIHMPGGKTK------------------PLVP-NLWKSADRHNGWKGLYGRL- 1544
Query: 486 WDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
W F T++T P+P K G++ H
Sbjct: 1545 --------------------------PRWG----------CFPTVITEPSPSGKVGQVFH 1568
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
P QDR++TVREYARAQGFPDSYVF G + Y Q+GNAV PP+ A+G ++ + + A
Sbjct: 1569 PLQDRIMTVREYARAQGFPDSYVFSGKVKARYCQVGNAVAPPVGLALGRQLAQAVAAA 1626
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 135/199 (67%), Gaps = 1/199 (0%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LKCLD+F+GCGGL EG QAG+ + W++E E A +Y N +V DDCN +L+ +
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T G LPQK +V+L+ GPPCQGFS +NR E SK KN L+ ++LS+CD +
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V + KN +L+ CL++M YQ TF +LQ+G YGV Q+R R +ILA+
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAA 1311
Query: 297 KPGYKLPSFPQPLHAFSNQ 315
PG KLP +P+PLH FS +
Sbjct: 1312 APGEKLPFYPEPLHVFSTR 1330
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 231/552 (41%), Gaps = 157/552 (28%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+ +DLF+GCGG GL K +VE S ++ N + +V+ D N +LK
Sbjct: 1069 PILAMDLFAGCGGFTHGLHACEYIKTTHAVEWVASAVKTFRNNRPDTNVLHGDINALLKH 1128
Query: 177 LLKGHTQH---------KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
++ H + + LP K ++ I GPPCQGF+ +NR + + + N L+
Sbjct: 1129 AIERHEEATKTGKKEAMEANQLPPKGAINFIYCGPPCQGFTGMNRFPKADD--VLNSLIA 1186
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFN---------------KNEILQCIFHCLLKMNYQV 272
T LS D ++P Y +LENV G+V F K +++ I L M YQ
Sbjct: 1187 TTLSCVDFYRPTYFLLENVRGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTAMGYQA 1246
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF------SNQLFTINGNLVAN 326
F + Q+G YGV QSR R I G+ LP FPQP H F S L + L
Sbjct: 1247 RFSLQQAGMYGVPQSRRRFFIWGVLRGHTLPQFPQPTHTFPKPGSLSMLLPNVGVRLEPV 1306
Query: 327 KTSHAPYRSITVRDAISDLPRVSQ---------------------GANCYLFHNPPKTHF 365
AP+R I+V +AISDLP G+ + P++ F
Sbjct: 1307 TARSAPHRYISVSEAISDLPAFEYDEPEEPKDERSRSGPHKDKWIGSEVREYDAEPESDF 1366
Query: 366 QRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA-----------DWR 414
Q+ M+ R D + L +H+ K + + RI +P P D R
Sbjct: 1367 QKAMR--RRTKD------KKLYNHVTKTFTEMNVKRICNVPKRPAVGEPYPDNPPFYDHR 1418
Query: 415 DLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVH---TA 471
DLP ++ PW L + A
Sbjct: 1419 DLP------------------------------------------PSLSPWCLSNPNSKA 1436
Query: 472 SRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV 531
+++ W G+ GRL ++QG F T +
Sbjct: 1437 AKHRMWPGLYGRL----------------------------DYQGY---------FQTAL 1459
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF---RGGICDMYKQIGNAVPPPL 588
T P+ KQGK+LHP Q RV+TVRE+AR+QGFPD + F R + DM++QIGNAVPP L
Sbjct: 1460 TEVCPMGKQGKVLHPYQSRVITVREHARSQGFPDDFRFYAERDNLKDMHRQIGNAVPPRL 1519
Query: 589 AKAIGYEIIKCI 600
A A+ ++ + I
Sbjct: 1520 ASALSRQLARAI 1531
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 180/358 (50%), Gaps = 88/358 (24%)
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLS+ D F+P+Y +LENV V FNK + + LL+M YQV F VLQ
Sbjct: 5 SKVQCEMILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRFGVLQ 64
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLH-AFSNQL-FTINGN----LVANKTSHAP 332
+GN+GV+QSR R I A+ P LP +P+ H + S+QL T+ G V + AP
Sbjct: 65 AGNFGVSQSRKRAFIWAAAPDESLPDWPEARHVSASSQLGVTLPGGGQYAAVRDAGLGAP 124
Query: 333 YRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLR-ELLQDH 389
+R+ITVRD I+DLP V+ GA+ ++ P ++ FQ +HI + ++L DH
Sbjct: 125 FRAITVRDTIADLPPVANGADTLKTVYTQPAESWFQ-----------MHIRGKTDVLTDH 173
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKS 449
I K ++ L +R + IP P AD RDLP +KL
Sbjct: 174 ISKEMNELNLIRCQRIPKRPGADCRDLPAEKIKL-------------------------- 207
Query: 450 SSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS 509
S GQ +IPW L +TA+R+N W+G+ GRL W
Sbjct: 208 -----STGQLVDLIPWCLPNTAARHNQWKGLFGRLDW----------------------- 239
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
D +F T +T P P+ K G HP Q+R++TVRE AR+QGFPDSY
Sbjct: 240 --------------DGNFPTSITDPQPMGKVGMCFHPVQNRIVTVRECARSQGFPDSY 283
>gi|296212502|ref|XP_002752890.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Callithrix
jacchus]
Length = 298
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 157/277 (56%), Gaps = 37/277 (13%)
Query: 326 NKTSHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLR 383
+ S P+ +ITVRD +SDL V GA+ ++ P++ FQR + +
Sbjct: 37 TRLSSGPFWTITVRDTMSDLLEVQNGASALEISYNGEPQSWFQRQLWG--------TQYQ 88
Query: 384 ELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS 443
+L+DHICK +S L+ R++ IP P +DWRDLPNI V+L G + KL+Y +K+
Sbjct: 89 PILRDHICKDMSALVAARMQHIPLAPGSDWRDLPNIEVRLSDG--TMARKLRYTHHNRKN 146
Query: 444 VCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWS 503
SSS +G + + A+R Q NT+IPW
Sbjct: 147 ----GRSSSRALRGVCSCVEAGKACDPAAR---------------------QFNTLIPWC 181
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGF 563
L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++VRE A +QGF
Sbjct: 182 LPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECACSQGF 241
Query: 564 PDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
PD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 242 PDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCV 278
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 146/264 (55%), Gaps = 25/264 (9%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P + L LD+F+GCGGL GL +AGV+ W++E E ++ N E +V D+CN+
Sbjct: 1056 PKEIRLATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNV 1115
Query: 173 VLKSLL-KGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRA 213
+L++++ KG Q VS LP +VD I GPPCQGFS +NR
Sbjct: 1116 ILRAIMEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRF 1175
Query: 214 RELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT 273
+ SK++ ++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV
Sbjct: 1176 NQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVR 1235
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN------LVANK 327
F +L++G YGV+QSR R I A+ P LP +P+P+H F I+ + V +
Sbjct: 1236 FGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRST 1295
Query: 328 TSHAPYRSITVRDAISDLPRVSQG 351
AP+R ITVRD I DLP V G
Sbjct: 1296 ALGAPFRPITVRDTIGDLPSVENG 1319
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 71/100 (71%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G+ +IP+ L +TA R+N W+G+ GRL W +F T VT P P+ K G HPEQ R+LT
Sbjct: 1332 GRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILT 1391
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
VRE AR+QGFPDSY F G I ++QIGNAVPPPLA A+G
Sbjct: 1392 VRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALG 1431
>gi|240979618|ref|XP_002403217.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215491328|gb|EEC00969.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 230
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 149/260 (57%), Gaps = 41/260 (15%)
Query: 344 DLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP + GA + T FQR ++ G + L+DH+CK ++PL+E R
Sbjct: 3 DLPEIRNGAKREEIPYGAEALTPFQRTLRGGGAV----------LRDHVCKEMAPLVEAR 52
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
+R IP P +DWRDLPN V+L G ++T KL+Y +K+ +S G
Sbjct: 53 MRHIPLEPGSDWRDLPNAVVRLSDGV-TFTRKLRYTHHDRKN--------GKSSTGALRG 103
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFD-MTGQKNTIIPWSLVHTASRNNNWQGVLGR 520
+ P A D D + Q NT+IPW L HT +R+N+W G+ GR
Sbjct: 104 VCP-------------------CAEDAPCDPVCRQDNTLIPWCLPHTGNRHNHWAGLYGR 144
Query: 521 LAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
L WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++Q+
Sbjct: 145 LDWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGTILDRHRQV 204
Query: 581 GNAVPPPLAKAIGYEIIKCI 600
GNAVPPPLA+AIG EI+KC+
Sbjct: 205 GNAVPPPLARAIGREILKCL 224
>gi|322792107|gb|EFZ16179.1| hypothetical protein SINV_13041 [Solenopsis invicta]
Length = 269
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 131/220 (59%), Gaps = 32/220 (14%)
Query: 383 RELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK 442
R +L DH+CK +S L+E R+ IP+ +DWRDLPNI VKL G ++++KL+Y K
Sbjct: 7 RSILMDHMCKGMSSLVEARMSYIPTTIGSDWRDLPNIVVKLSDG--TFSKKLEYLHDDPK 64
Query: 443 SVCDCKSSSSCTSKGQKNTIIPWSLVHTASRN--NNWQGVLGRLAWDESFDMTGQKNTII 500
A RN N ++GV Q NT+I
Sbjct: 65 ----------------------------AGRNSQNGFRGVCSCCTGQPCDPTDKQFNTLI 96
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARA 560
PW L HT++R+NNW+G+ GRL W+ F T +T P P+ KQG++LHP + RV++VRE AR+
Sbjct: 97 PWCLPHTSNRHNNWKGLYGRLDWNGFFKTTITNPEPMGKQGRVLHPVESRVVSVRECARS 156
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
QGFPDSY F G I D Y+Q+GNAVPPPL AIG+EI KCI
Sbjct: 157 QGFPDSYRFFGTILDKYRQVGNAVPPPLGAAIGHEIRKCI 196
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 236/544 (43%), Gaps = 154/544 (28%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
T LD+FSG GGL +GL ++GV +++E + ++ NF V D N L+
Sbjct: 309 TKFNTLDVFSGAGGLSQGLHESGVIGNSYAIESDTVACQTFAKNFPSAIVYNYDANKFLE 368
Query: 176 SLLKGHTQH-KGVS----------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+K + +G++ +P K ++D+IV GPPCQG+S+ NR K LK
Sbjct: 369 RAMKIDAGYVEGIAYDIAGNLMPKMPAKGDIDMIVGGPPCQGWSRANRKNNPNKI-LKEP 427
Query: 225 L------VFTFLSFCDLFQPKYIILENVTGLVH--FNKNEI--------------LQCIF 262
+ + TFLS+ D ++PKY +LENV G+ H N N+I ++ IF
Sbjct: 428 ICPMREAIATFLSYVDFYRPKYFLLENVPGIKHHPLNGNDIPNYSPDGGPLKNGAMKFIF 487
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN 322
L + YQ LQ+G YGV SR RV+I A PG+KLP +P+P + F ++ N
Sbjct: 488 RFLTSLGYQCQHATLQAGAYGVPSSRKRVIIWACLPGHKLPKYPEPTNVFK----SVPRN 543
Query: 323 LVANKTSHAPYRSITVRDAISDLPRV------------------SQGANCYLFHNPPKTH 364
+ S AP+ I + D ISDL + + G+ + + P++
Sbjct: 544 PPYLRRS-APHWPINIGDCISDLSLIGVENPHEETKHSTSKNKKNVGSGKQICASTPRSE 602
Query: 365 FQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLP 424
+QR +++ +H +H+ +S + R+R +P AD+R +
Sbjct: 603 YQRRVQNSDSCQPLH--------NHVTGRISVIQNERVRTVPLEAGADYRRM-------- 646
Query: 425 RGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQ-----G 479
EKL A ++ ++ +N N+Q G
Sbjct: 647 ------DEKLMTKAMRE-------------------------VLEEMGKNKNYQNKKLEG 675
Query: 480 VLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK 539
GRL+ D+ F + T +R+ W
Sbjct: 676 RYGRLSADDLFK-------------IFTTTRD----------KW---------------- 696
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFR---GGICDMYKQIGNAVPPPLAKAIGYEI 596
LHP RV T+RE AR GFPDS+V+ + D+ KQIGNAVPPP A+A+G E+
Sbjct: 697 ---TLHPYLPRVFTIRELARGMGFPDSFVWDMIITKLSDVLKQIGNAVPPPFARALGNEL 753
Query: 597 IKCI 600
K +
Sbjct: 754 RKVL 757
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 192/422 (45%), Gaps = 72/422 (17%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP +V++I GPPCQG S NR R ++ KN + F+ D +PK++
Sbjct: 580 YKSNILPLPGDVEVICGGPPCQGISGFNRFRNVKNPLEDPKNKQLVVFMDIVDFLKPKFV 639
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV L+ F + + CL+ M YQ +L +G YG+ Q R RV + + K
Sbjct: 640 LMENVVDLLKFADGFLGRYAMGCLVSMKYQARLGMLAAGAYGLPQFRMRVFLWGACATEK 699
Query: 302 LPSFPQPLHAFSNQ---LFTINGNLVANKTSHAPY--RSITVRDAISDLPRVS--QGANC 354
LP +P P H + GN VA + P R + + DAISDLP V+ + +
Sbjct: 700 LPQYPLPTHDVLVRGVVPLEFEGNTVAYEEGVKPQLERKLFLEDAISDLPAVANDEKRDE 759
Query: 355 YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
+ PKT FQRM+ R+ + + L +LL DH L+ R+ IP ++R
Sbjct: 760 MPYGESPKTEFQRMI----RLKKMGLELNDLLFDHRPLELNDDDYQRVCQIPKRKGGNFR 815
Query: 415 DLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRN 474
DLP + V+ KK D + S G K + +++ N
Sbjct: 816 DLPGVRVR----------------PDKKVEWDPEVPRQYLSSG-KPLVPDYAMTFV---N 855
Query: 475 NNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTP 534
+ RL WDE+ +P T+VT
Sbjct: 856 GSSSKPFARLWWDET----------VP---------------------------TVVTRA 878
Query: 535 NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
P N+ I+HPEQDRVLT+RE AR QGFPD Y G I + Y Q+GNAV P+A+A+GY
Sbjct: 879 EPHNQA--IMHPEQDRVLTIRENARLQGFPDYYQLCGPIKERYIQVGNAVAVPVARALGY 936
Query: 595 EI 596
+
Sbjct: 937 AL 938
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 201/441 (45%), Gaps = 78/441 (17%)
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFT 228
+L+ +LKG K LP+ + D+I GPPCQG S NR R + +N +
Sbjct: 434 DLIQDFVLKGF---KAKILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIV 490
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
F+ + +PKY+++ENV ++ F K + + L++MNYQ ++ +G YG+ Q R
Sbjct: 491 FMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGCYGLPQYR 550
Query: 289 NRVVILASKPGYKLPSFPQPLHAF---SNQLFTINGNLVANKTSHAP--YRSITVRDAIS 343
RV + P +LP F P H N+VA +P +++ + DAI+
Sbjct: 551 LRVFFWGAHPDERLPQFALPTHDVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIA 610
Query: 344 DLPRVS--QGANCYLFHNPPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILS 395
DLP VS + + PP+T FQ+ ++ GS + +L DH+ L+
Sbjct: 611 DLPPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEKSVLYDHLPLPLN 670
Query: 396 PLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTS 455
+R+ IP A++RDLP + V G ++ + D K+ S
Sbjct: 671 EDDYLRVCRIPKKKGANFRDLPGVVV----GANNVARR------------DPKTEMELPS 714
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
K + ++L + ++ RL WDE+ +P
Sbjct: 715 G--KQMVPDYALNFSEGKSTK---PFARLWWDET----------VP-------------- 745
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
T++T P+P + LHPEQDRVLTVRE AR QGFPD Y F G + +
Sbjct: 746 -------------TVLTKPDPHCQA--YLHPEQDRVLTVRESARLQGFPDYYKFCGQVKE 790
Query: 576 MYKQIGNAVPPPLAKAIGYEI 596
Y QIGNAV P+A+A+GY +
Sbjct: 791 RYCQIGNAVAVPVARALGYAM 811
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 4 HVQWLVRPNDTILGDKIQF-DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSS--EEEIL 60
VQW RP DT++ ++ F + LF +N L I V + +T + + IL
Sbjct: 157 RVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNLKSKSIL 216
Query: 61 --DNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPM-----P 113
D ++ K Y+ + D + N L + LK +H P+F P
Sbjct: 217 PCDFYYDMKYLIDYSTFCTMEVDNSADRTN---LSTSACLKTVHMNGIKPEFNRMSSHKP 273
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPC-----WSVELERSEAASYDANFQECSV 165
L LD++SGCGG+ GLC W++++ +S S N E +
Sbjct: 274 YKPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQI 330
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 201/441 (45%), Gaps = 78/441 (17%)
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFT 228
+L+ +LKG K LP+ + D+I GPPCQG S NR R + +N +
Sbjct: 885 DLIQDFVLKGF---KAKILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIV 941
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
F+ + +PKY+++ENV ++ F K + + L++MNYQ ++ +G YG+ Q R
Sbjct: 942 FMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGCYGLPQYR 1001
Query: 289 NRVVILASKPGYKLPSFPQPLHAF---SNQLFTINGNLVANKTSHAP--YRSITVRDAIS 343
RV + P +LP F P H N+VA +P +++ + DAI+
Sbjct: 1002 LRVFFWGAHPDERLPQFALPTHDVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIA 1061
Query: 344 DLPRVS--QGANCYLFHNPPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILS 395
DLP VS + + PP+T FQ+ ++ GS + +L DH+ L+
Sbjct: 1062 DLPPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEKSVLYDHLPLPLN 1121
Query: 396 PLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTS 455
+R+ IP A++RDLP + V G ++ + D K+ S
Sbjct: 1122 EDDYLRVCRIPKKKGANFRDLPGVVV----GANNVARR------------DPKTEMELPS 1165
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
K + ++L + ++ RL WDE+ +P
Sbjct: 1166 G--KQMVPDYALNFSEGKSTK---PFARLWWDET----------VP-------------- 1196
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
T++T P+P + LHPEQDRVLTVRE AR QGFPD Y F G + +
Sbjct: 1197 -------------TVLTKPDPHCQA--YLHPEQDRVLTVRESARLQGFPDYYKFCGQVKE 1241
Query: 576 MYKQIGNAVPPPLAKAIGYEI 596
Y QIGNAV P+A+A+GY +
Sbjct: 1242 RYCQIGNAVAVPVARALGYAM 1262
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 135/240 (56%), Gaps = 22/240 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV++ W++E E +++ N E SV ++CN++L ++
Sbjct: 26 LATLDIFAGCGGLSEGLERSGVSQTKWAIEYEEPAGEAFNLNHPEASVFVNNCNVILSAI 85
Query: 178 L-------------KGHTQHKGVS------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ + Q K + LP+ +VD I GPPCQGFS +NR +
Sbjct: 86 MSACGDEDDCMSTPEASDQAKKLDENEINKLPRPGQVDFINGGPPCQGFSGMNRFNKSAW 145
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D F+PKY +LENV V FNK + + LL+M YQV F +L
Sbjct: 146 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILD 205
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITV 338
+G +GV+QSR R I A+ P LP +P+P+H F+ I+ + + T +A RS
Sbjct: 206 AGAFGVSQSRKRAFIWAASPEETLPDWPEPMHVFAGSELKIS---LGSGTQYAAVRSTAT 262
>gi|34784446|gb|AAH57461.1| Dnmt1 protein [Danio rerio]
Length = 200
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 120/217 (55%), Gaps = 48/217 (22%)
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS---------- 443
+S L+ RIR IP P +DWRDLPN V+L G + T+KL+Y KK+
Sbjct: 1 MSALVAARIRNIPLAPGSDWRDLPNFEVRLRDG--TTTKKLRYTHSDKKNGRSGTGALRG 58
Query: 444 VCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWS 503
VC C C D F NT+IPW
Sbjct: 59 VCSCSEGKPCDPA------------------------------DRQF------NTLIPWC 82
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGF 563
L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V+E AR+QGF
Sbjct: 83 LPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVKECARSQGF 142
Query: 564 PDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
PD+Y F G + D ++Q+GNAVPPPL+KAIG E+ KC+
Sbjct: 143 PDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEVKKCV 179
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 183/423 (43%), Gaps = 84/423 (19%)
Query: 194 EVDLIVAGPPCQGFSQLNRARELEKSKL--KNGLVFTFLSFCDLFQPKYIILENVTGLVH 251
+VD++ GPPCQG S NR RE E KN + F+ +PKY+ +ENV ++
Sbjct: 937 DVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILK 996
Query: 252 FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA 311
F + + L+ M+YQ ++ +G YG+ Q R RV +L KLP FP P H
Sbjct: 997 FADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTH- 1055
Query: 312 FSNQLFTING-------NLVA--NKTSHAPYRSITVRDAISDLPRVSQGA--NCYLFHNP 360
+ NG NLV N T R I + D +SDLP V+ G + L+
Sbjct: 1056 ---EAIVKNGCPLAFERNLVGWPNDTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKG 1112
Query: 361 PKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
P+T FQR ++ G R H + L DH +L RI IP A++R
Sbjct: 1113 PQTEFQRYIRSFNVEVHGPRAHVTKDSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFR 1172
Query: 415 DLPNICVKLPR-GQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASR 473
DL + V + T++ + V DC A
Sbjct: 1173 DLSGVIVGPDNVARLDPTKERVLLPSGRPLVLDC---------------------ILAYE 1211
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
N GR+ WDE V+G T++T
Sbjct: 1212 NGKSLRPFGRVWWDE----------------------------VVG---------TVLTV 1234
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
PN + ++HP QDR+LT+RE AR QGFPD+Y FRG + D Y+QIGNAV P+ +A+G
Sbjct: 1235 PN--ARMQALIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALG 1292
Query: 594 YEI 596
Y +
Sbjct: 1293 YAL 1295
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 134/240 (55%), Gaps = 22/240 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV++ W++E E +++ N E S+ ++CN++L ++
Sbjct: 26 LATLDIFAGCGGLSEGLERSGVSQTKWAIEYEEPAGEAFNLNHPEASLFVNNCNVILSAI 85
Query: 178 L-------------KGHTQHKGVS------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+ + Q K + LP+ +VD I GPPCQGFS +NR +
Sbjct: 86 MSACGDEDDCISTPEASDQAKKLDESEINKLPRPGQVDFINGGPPCQGFSGMNRFNKSAW 145
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D +PKY +LENV V FNK + + LL+M YQV F +L
Sbjct: 146 SKVQCEMILAFLSFADYLRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILD 205
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITV 338
+G +GV+QSR R I A+ P LP +P+P+H F+ I+ + + T +A RS
Sbjct: 206 AGAFGVSQSRKRAFIWAASPEETLPDWPEPMHVFAGSELKIS---LGSGTQYAAVRSTAT 262
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 186/423 (43%), Gaps = 92/423 (21%)
Query: 194 EVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVH 251
+VD+I GPPCQG S NR RE + + +N + F+ +PKYI +ENV ++
Sbjct: 1050 DVDVICGGPPCQGISGYNRNREFDAPFNCERNKQIIVFMDVMQFLKPKYIYMENVLDILK 1109
Query: 252 FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA 311
F + + L+ M+YQ V+ +G YG+ Q R RV + KLP FP P H
Sbjct: 1110 FADATLARYALSRLVSMHYQAKLGVMAAGCYGLPQFRMRVFL-------KLPPFPLPTH- 1161
Query: 312 FSNQLFTING-------NLVA--NKTSHAPYRSITVRDAISDLPRVSQGANC--YLFHNP 360
+ NG NLV + + I + DA+SDLP V G L+
Sbjct: 1162 ---EAIVKNGCPLAFERNLVGWPDSMPMQLEKPIVLEDALSDLPEVENGEKREEMLYMKG 1218
Query: 361 PKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
P+T FQR ++ GSR H I ++ +L DH + L +R+ IP A++R
Sbjct: 1219 PQTEFQRYIRSFNSEVLGSRAHVIKVSKSKLF-DHRPRALDVDNYLRVLQIPKKKGANFR 1277
Query: 415 DLPNICVKLPR-GQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASR 473
DLP + V + T++ V DC A +
Sbjct: 1278 DLPGVIVGPDNIARLDPTKERILLPSGNPLVVDCV---------------------LAYK 1316
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
N GRL WDE V+G T++T
Sbjct: 1317 NGKSLRPYGRLWWDE----------------------------VVG---------TVLTC 1339
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
PN ++HP QDR+LT+RE AR QGFPDS+ FRG + D Y+QIGNAV P+ +A+G
Sbjct: 1340 PN--AHMQALIHPAQDRLLTIRESARLQGFPDSFRFRGTVKDRYRQIGNAVAVPVGRALG 1397
Query: 594 YEI 596
Y +
Sbjct: 1398 YAL 1400
>gi|307178879|gb|EFN67419.1| DNA (cytosine-5)-methyltransferase PliMCI [Camponotus floridanus]
Length = 1126
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 125/203 (61%), Gaps = 30/203 (14%)
Query: 399 EMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQ 458
E R+ IP+ +DWRDLPNI V+L G ++++KL+Y K++ KSS+
Sbjct: 882 EARMSHIPTATGSDWRDLPNIAVRLSDG--TFSKKLEYMHHDKRA---GKSSTG------ 930
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQK-NTIIPWSLVHTASRNNNWQGV 517
+L S N GRL D T ++ NT+IPW L HT +R+N+W G+
Sbjct: 931 -------ALRGVCSCNT------GRLC-----DPTDKQFNTLIPWCLPHTGNRHNHWSGL 972
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WD F T VT P P+ KQG++LHP Q+RV++VRE AR+QGFPDS+ F G I D +
Sbjct: 973 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPVQNRVVSVRECARSQGFPDSFRFYGTILDKH 1032
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+Q+GNAVPPPL AIG EI KCI
Sbjct: 1033 RQVGNAVPPPLGAAIGQEIRKCI 1055
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 225/535 (42%), Gaps = 113/535 (21%)
Query: 118 LKCLDLFSGCGGLMEGLCQAG-VAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
++ LD F G GGL G+ + + ++V+ + A ++ N +V DD N L S
Sbjct: 211 MQMLDPFCGAGGLTAGIERGSRCIQTKFAVDSDEEAAKAFAKNHPHATVFHDDANSFLTS 270
Query: 177 LLKGHTQHKGVS------LPQKH-EVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
L + HT V+ +KH +D+I AGPPCQG S LN R + K N L+ T
Sbjct: 271 LDQ-HTCIPDVNGNEISPADRKHGHIDVICAGPPCQGHSTLNSHRTADDPK--NCLILTA 327
Query: 230 LSFCDLFQPKYIILENVTGLVHFN------------KNEILQCIF---HCLLKMNYQVTF 274
LS + +P+Y+++ENV ++ + E IF LL++ YQV
Sbjct: 328 LSLVEHIRPRYLVIENVVMIMGWRLMAEQRGQGIIRGGETHGGIFLITSILLRLGYQVRI 387
Query: 275 DVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ-------LFTINGNLVANK 327
+L +G +G Q+R R ++A++PG LP FP P HAF T +
Sbjct: 388 GLLNAGMHGTPQNRRRFFLIAAEPGSTLPDFPHPTHAFPKAKTLKMAPFPTAQPGWPVDD 447
Query: 328 TSHA-------------PYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSR 374
A P+ ITV DAI DL + N HN P F +K G
Sbjct: 448 GEEAVGDDEMRLPPLCVPHPKITVGDAIGDLKGYNWKRNPERQHNAPS--FPCDLKKGCN 505
Query: 375 IHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKL 434
P+ PNA R+ +
Sbjct: 506 -------------------------------PNMPNAYARNA--------------ASEF 520
Query: 435 KYNAKKKKSVCDCKSSSSCTSKGQKNTIIP--WSLVHTA------SRNNNWQGVLGRLAW 486
+ A++ V K T+ G K I+ W + A +RN W +
Sbjct: 521 QVRARENTEVMSAKQLQHVTA-GFKEYIVRNVWDIPIRADGEDENARNPGWTAI------ 573
Query: 487 DESFDMTGQKNTIIPWSLVHTASRNNNWQG-VLGRLAWDESFDTIVTTPNPLNKQGKILH 545
+ Q P S V SR+ +G RL + F T+VT P KQ ++LH
Sbjct: 574 -DPDSRRAQYGLADPTSHV---SRDGMREGRYYRRLKMNGHFATLVTNVRPTAKQSQVLH 629
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
P Q+R+++VRE ARAQGFPD + F G M +QIGNAVP LA+AIG E+ K +
Sbjct: 630 PNQNRLVSVREQARAQGFPDDFKFVGNAMAMQRQIGNAVPVTLAEAIGRELRKSM 684
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 192/425 (45%), Gaps = 78/425 (18%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP +VD + GPPCQG S NR R + KN + T++ D +PKY+++ENV
Sbjct: 386 LPLPGDVDAVCGGPPCQGISGFNRFRNSDNPLDDEKNRQMVTYMDIVDHLKPKYVLMENV 445
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ F+K + + L+ NYQ ++ +G YG+ Q R R S P LP FP
Sbjct: 446 VDILKFSKGFLGRYALSFLVSRNYQARLGIMAAGCYGLPQFRLRAFFWGSDPYKMLPQFP 505
Query: 307 QPLHAFSNQLFT---INGNLVANKTSHAPY--RSITVRDAISDLPRVS--QGANCYLFHN 359
P H + N+VA + +++ + DA+SDLP V+ + + +
Sbjct: 506 LPTHDVVFKCGAPTEFERNVVAYDENQPRVLEKALVIEDALSDLPSVTLLETRDQLSYGK 565
Query: 360 PPKTHFQRMMKDG------SRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
P+T FQR ++ S+ +D + +L DH LS RI IP A +
Sbjct: 566 APQTEFQRYIRASKSEIMCSKDYDAKKSRTSVLYDHCSLQLSKENYSRICQIPRRKGACF 625
Query: 414 RDLPNICVKLPRG--QHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTA 471
RDLP + V LP Q +++++ K V + C + ++ P+
Sbjct: 626 RDLPGVIV-LPDNSTQRDPSKEMELLPSGKPLV-----PNFCFTYENGKSLRPF------ 673
Query: 472 SRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV 531
GRL WDE+ +P T++
Sbjct: 674 ----------GRLWWDET----------VP---------------------------TVL 686
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
TT P + ILHPEQDRVLTVRE AR QGFPD Y F G I + Y QIGNAV P+++A
Sbjct: 687 TTAGPHFQA--ILHPEQDRVLTVRENARLQGFPDFYRFSGTIKERYCQIGNAVAIPVSRA 744
Query: 592 IGYEI 596
+GY +
Sbjct: 745 LGYAM 749
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora B]
Length = 1248
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 226/539 (41%), Gaps = 122/539 (22%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+K LDLF+G G + G K ++E+ S A + N + V N+VL+
Sbjct: 754 PMKGLDLFAGAGAFGLAMEATGCIKITHAIEISPSAARTLKINSPDTIVYNQCANVVLRY 813
Query: 177 LLKGHT-QHKGVSLPQK-------------HEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
+K Q + +PQ E+D+++AG PCQ S LN ++ + K
Sbjct: 814 AIKSQELQGQKFEIPQNILGTEQLAPPPKPGEIDVLIAGFPCQPHSTLNMFQK--ANDRK 871
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGL-------VHFNKNEI--------LQCIFHCLLK 267
L+ T +++ D ++PKY+ LENV G V N++++ L+ + L+
Sbjct: 872 THLIATLMAYIDHYKPKYVFLENVRGFLSHALQAVQANRHKVVGGVEKGGLKWLVATFLE 931
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNL---- 323
+ +QV F +LQ+ +YG QSR R ++AS+ G LP FP P H F + NL
Sbjct: 932 LGFQVRFGLLQAAHYGTPQSRVRFFLIASRRGLPLPQFPTPTH-----FFHVKDNLEIKL 986
Query: 324 --------VANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRI 375
V AP+ +++ DAI DLPR + + NP K + G R
Sbjct: 987 TDDEPAAAVRTAAGVAPFSFVSIEDAIGDLPR-------FDWENPKKLE----ARQGGRS 1035
Query: 376 HDIHINLRE------LLQDHICKILSPLMEMRIRLIPSF--PNADW----RDLPNICVKL 423
+ E +++ C+ P + F P + R+ P + +
Sbjct: 1036 RSASMRASEEPAPERQVREVACRSDKPFCGFAGSNVEYFSEPRTTFQVKSREKPTMDL-- 1093
Query: 424 PRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS---RNNNWQGV 480
QH YT LK ++ V + + + + W +S RN G+
Sbjct: 1094 ---QH-YTRVLKPETVER--VINIPLRAKADYRSLPVYLHEWQFADPSSALARNGFPPGL 1147
Query: 481 LGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQ 540
GRLA +E F T VT P KQ
Sbjct: 1148 YGRLAPNECF-------------------------------------HTTVTNVEPTAKQ 1170
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD---MYKQIGNAVPPPLAKAIGYEI 596
+LHP RV+TVRE AR+QGFPD +VF D M +QIGNAVP PLA A+G E+
Sbjct: 1171 SWVLHPWCKRVITVRELARSQGFPDHFVFYARDSDVKTMQRQIGNAVPWPLAAALGQEL 1229
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 183/417 (43%), Gaps = 71/417 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP +VD+I GPPCQG S NR R E KN + F+ +PK+ ++ENV
Sbjct: 476 LPLPGDVDVICGGPPCQGISGFNRFRNKESPLDDEKNKQLVVFMDIVQYLKPKFTLMENV 535
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
LV F + + + LL+MNYQ ++ +G YG+ Q R RV + + P KLP FP
Sbjct: 536 VDLVKFAEGFLGRYALGRLLQMNYQARLGIMAAGAYGLPQFRLRVFLWGAAPSQKLPQFP 595
Query: 307 QPLHAFSNQ-----LFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYLFHN 359
P H + F IN + + + DAISDLPRV ++ + +
Sbjct: 596 LPTHDVIVRGVIPLEFEINTVAYNEGQKVQLQKKLLLEDAISDLPRVQNNERRDEIKYDK 655
Query: 360 PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNI 419
+T FQR ++ + +L LL DH L+ R+ IP +RDLP +
Sbjct: 656 AAQTEFQRFIRLSKH---GNTSLNSLLYDHRPLELNADDYQRVCRIPKKKGGCFRDLPGV 712
Query: 420 CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQG 479
V K++++ ++ D K + +++ N
Sbjct: 713 RV-------GADNKVEWDPDVERVYLDSG----------KPLVPDYAMTFV---NGTSSK 752
Query: 480 VLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK 539
RL WDE+ +P T+VT P N+
Sbjct: 753 PFARLWWDET----------VP---------------------------TVVTRAEPHNQ 775
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
ILHPEQDRVLT+RE AR QGFPD Y G + + Y Q+GNAV P+A+A+GY +
Sbjct: 776 --AILHPEQDRVLTIRENARLQGFPDFYKLCGPVKERYIQVGNAVAVPVARALGYTL 830
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 211/473 (44%), Gaps = 83/473 (17%)
Query: 155 SYDANFQECSVIQ--DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN 211
YD+++ I DC V+K + KG+ + LP + + I GPPCQG S N
Sbjct: 400 GYDSSYDTWEPIDGLSDCKEVMKDFVTKGYKKR---LLPLPGDANFICGGPPCQGVSGFN 456
Query: 212 RARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMN 269
R R E KN + ++ D +PKY+++ENV ++ F+ + + L+ MN
Sbjct: 457 RFRNAEAPLEDTKNKQLLVYMDIIDFLKPKYVLMENVVDILKFSGGYLGRYAIGRLVAMN 516
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFT---INGNLVA- 325
YQ ++ +G+YG+ Q R RV + ++P +LP +P P H ++ F VA
Sbjct: 517 YQARMGMMAAGSYGLPQFRMRVFLWGARPTEQLPPYPLPTHEVVSRGFVPTEFEEITVAY 576
Query: 326 -NKTSHAPYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMK------DGSRIH 376
K + ++ + DAISDLP V+ N + P +T FQR ++ GS +
Sbjct: 577 DKKDTCQLAGALLLDDAISDLPPVTNDENQDERNYGAPARTEFQRYIRLKKNEMVGS-MA 635
Query: 377 DIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY 436
R +L DH L+ R+ IP A++RDLP + V K+++
Sbjct: 636 TAQSTPRRILYDHRPLQLNKDDYDRVCQIPQKKGANFRDLPGVLVN--------GNKVEW 687
Query: 437 NAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQK 496
+ ++ + D ++P T R + + GRL WDE
Sbjct: 688 DPSVERVMLD-----------SGKPLVP-DYAMTFVRGTSTKP-FGRLWWDE-------- 726
Query: 497 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
I+P T+VT P N+ ILHP Q+RVLT+RE
Sbjct: 727 --IVP---------------------------TVVTRAEPHNQA--ILHPRQNRVLTIRE 755
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI-IKCIGNAVPPPL 608
AR QGFPD Y G + + Y Q+GNAV P+A A+GY + C G + PL
Sbjct: 756 NARLQGFPDCYKLCGPVKERYIQVGNAVAVPVALALGYTFGLACQGLSDDKPL 808
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 188/427 (44%), Gaps = 72/427 (16%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP +VD+I GPPCQG S NR R E KN + F+ + +P+++
Sbjct: 418 YKSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFV 477
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV +V F + + L+ MNYQ ++ +G YG+ Q R RV + ++
Sbjct: 478 LMENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEV 537
Query: 302 LPSFPQPLHAFSNQ---LFTINGNLVANKTSH---APYRSITVRDAISDLPRVS--QGAN 353
LP +P P H + N VA H + + DAISDLP V+ + +
Sbjct: 538 LPQYPLPTHDVIIRGVIPLEFEMNTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARD 597
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ P+T FQR I + E+L PS N
Sbjct: 598 EMPYGKAPQTEFQRF---------IRLRKNEMLGTS----------------PSESN--- 629
Query: 414 RDLPNICVKLPRGQHSYTEK-LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS 472
P G Y + L+ NA + VC +KG +P LV
Sbjct: 630 ----------PSGNKLYDHRPLELNADDYQRVCQIPK-----TKGANFRDLPGVLV---- 670
Query: 473 RNNNWQGVLGRLAWD---ESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDT 529
G ++ WD E + K + +++ ++ GRL WDE+ T
Sbjct: 671 ------GADNKVEWDPNVERIYLPSGKPLVPDYAMSFVGGSSSK---PFGRLWWDETVPT 721
Query: 530 IVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
+VT P N+ ILHPEQDRVL++RE AR QGFPD Y RG + + Y Q+GNAV P+A
Sbjct: 722 VVTRAEPHNQV--ILHPEQDRVLSIRENARLQGFPDYYQLRGPVKERYIQVGNAVAVPVA 779
Query: 590 KAIGYEI 596
+A+GY +
Sbjct: 780 RALGYAL 786
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 197/444 (44%), Gaps = 79/444 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C LK + + K + LP +VD+I GPPCQG S NR R E KN +
Sbjct: 337 NCKEKLKDFVTSGYKSKILPLP--GDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQL 394
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
++ + +PKY+++ENV +V F + + L+ MNYQV ++ +G YG+ Q
Sbjct: 395 VVYMDLVEYLRPKYVLMENVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQ 454
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFT---INGNLVANKTSHAPY---RSITVRD 340
R R+ + ++P KLP +P P H + N+VA + H + + + D
Sbjct: 455 FRMRMFMWGAQPTEKLPQYPLPTHDVVVRGVIPTEFEMNVVAYEEGHKDVHLEKKLLLED 514
Query: 341 AISDLPRVS--QGANCYLFHNPPKTHFQRMMKD-GSRIHDIHINLREL---LQDHICKIL 394
AISDLP V + + +H PPKT FQ +++ + D + L DH L
Sbjct: 515 AISDLPAVENDERRDEMPYHEPPKTEFQHLIRSPREEMFDTSTMSKPATHPLYDHRPLEL 574
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLK--YNAKKKKSVCDCKSSSS 452
+ R+ IP A++RDL + V+ P + + +K Y K V D
Sbjct: 575 NTDDYQRVCQIPKRKGANFRDLSGVRVR-PDKRVEWDPDVKRVYLESGKPLVPD------ 627
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S V+ +S RL WDE+ +P
Sbjct: 628 ----------YAMSFVNGSSSKP-----FARLWWDET----------VP----------- 651
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ I HPEQDRV+T+RE AR QGFPD Y G
Sbjct: 652 ----------------TVVTRAEPHNQ--AITHPEQDRVMTIRENARLQGFPDYYKLFGP 693
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
+ + Y Q+GNAV P+A+A+GY +
Sbjct: 694 VKERYIQVGNAVAVPVARALGYSL 717
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 199/442 (45%), Gaps = 75/442 (16%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C LK + + K + LP +VD+I GPPCQG S NR R E KN +
Sbjct: 439 NCKEKLKDFVTSGYKSKILPLP--GDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQL 496
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
++ + +PKY+++ENV +V F + + L+ MNYQV ++ +G YG+ Q
Sbjct: 497 VVYMDLVEYLRPKYVLMENVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQ 556
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLF---TINGNLVANKTSHAPY---RSITVRD 340
R R+ + ++P KLP +P P H + N+VA + H + + + D
Sbjct: 557 FRMRMFMWGAQPTEKLPQYPLPTHDVVVRGVIPTEFEMNVVAYEEGHKDVHLEKKLLLED 616
Query: 341 AISDLPRVS--QGANCYLFHNPPKTHFQRMMKD-GSRIHDIHINLREL---LQDHICKIL 394
AISDLP V + + +H PPKT FQ +++ + D + L DH L
Sbjct: 617 AISDLPAVENDERRDEMPYHEPPKTEFQHLIRSPREEMFDTSTMSKPATHPLYDHRPLEL 676
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ R+ IP A++RDL + V+ + +++++ K+ +
Sbjct: 677 NTDDYQRVCQIPKRKGANFRDLSGVRVRPDK-------RVEWDPDVKRVYLE-------- 721
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
K + +++ N + RL WDE+ +P
Sbjct: 722 --SGKPLVPDYAMSFV---NGSSSKPFARLWWDET----------VP------------- 753
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
T+VT P N+ I HPEQDRV+T+RE AR QGFPD Y G +
Sbjct: 754 --------------TVVTRAEPHNQA--ITHPEQDRVMTIRENARLQGFPDYYKLFGPVK 797
Query: 575 DMYKQIGNAVPPPLAKAIGYEI 596
+ Y Q+GNAV P+A+A+GY +
Sbjct: 798 ERYIQVGNAVAVPVARALGYSL 819
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 222/514 (43%), Gaps = 107/514 (20%)
Query: 144 WSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVSL------------PQ 191
+ +E S A +Y N + V D NL+LK ++ + V L P
Sbjct: 767 YVIEFSDSAAFTYHKNHPKAKVYCQDTNLLLKQAVEEDSGKAYVPLESLCSQLECPKMPS 826
Query: 192 KHE-VDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLV 250
+ E +D I+ GPPCQGFS+ N R+ ++ ++ + LS+ + + P Y +LENVTGL+
Sbjct: 827 RQENIDFILGGPPCQGFSRANHTRK--ENDIRTTMPVNMLSYAEHYDPTYFLLENVTGLL 884
Query: 251 HFN-------------KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
F + +L+ I L+ + YQV ++VLQ+ YGV QSRNR++I A+K
Sbjct: 885 DFKLRDHRLGSNGEIIERGMLKFIVRALIALGYQVHWNVLQAAQYGVPQSRNRLIIWAAK 944
Query: 298 PGYKLPSFPQPLHAF------------SNQLFTINGNLVANKTSH----APYRSITVRDA 341
G LP FP P HAF ++ L ++ L+ ++ AP+ I++ DA
Sbjct: 945 RGATLPKFPVPTHAFEGNGHRPKILGSASSLPNVSRALIPDEHGRYHQCAPFLPISIFDA 1004
Query: 342 ISDLPRVSQGANCYLFHNPPK----THFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
I+DLP + +N YL P TH K ++ + + +E + D S L
Sbjct: 1005 IADLPAF-EWSNPYLIQPYPAMQDTTHRLWFGKKIPQLDAVSLTGKEGVDDTPVGYYSTL 1063
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
I + + W + R Q YT + + + + K++++
Sbjct: 1064 GSYAIPPMNRY--QQWLREGMRTSQTRRVQGQYTRTFQAHLVESTTTVPLKANAT----- 1116
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
+ +P SL + + G+K NN +
Sbjct: 1117 --HKDLPLSLRPKMA-------------------LPGEKQ------------ENNCF--- 1140
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF------RG 571
GRL F +T +P K LHP Q RV +VRE ARAQGFPDSY F G
Sbjct: 1141 YGRLDGSAHFKCAMTQFSPTMKNSWPLHPLQKRVYSVRELARAQGFPDSYNFYSTSLRAG 1200
Query: 572 GICD---------MYKQIGNAVPPPLAKAIGYEI 596
I D KQIGNAV P AKA+G E+
Sbjct: 1201 KIVDDGEADREMKQIKQIGNAVAVPFAKALGKEL 1234
>gi|348509437|ref|XP_003442255.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 234
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 112/205 (54%), Gaps = 48/205 (23%)
Query: 406 PSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTS 455
P +DWRDLPNI V+L G + T+KL+Y KK+ VC C C
Sbjct: 46 PKKXXSDWRDLPNIEVRLKDG--TLTKKLRYTHHDKKNGRSGTGALRGVCTCAGGKPCDP 103
Query: 456 KGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
D F NT+IPW L HT +R+N+W
Sbjct: 104 S------------------------------DRQF------NTLIPWCLPHTGNRHNHWA 127
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G+ GRL WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D
Sbjct: 128 GLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILD 187
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCI 600
++Q+GNAVPPPL++AIG EI +CI
Sbjct: 188 KHRQVGNAVPPPLSRAIGLEIKRCI 212
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 207/455 (45%), Gaps = 80/455 (17%)
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVF 227
C +K + + K + LP +VD++ GPPCQG S NR R E + KN +
Sbjct: 553 CKQAIKKFITEGYRLKKLPLPG--DVDVVCGGPPCQGVSGFNRFRNTESPLADDKNQQLE 610
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
++ PK++++ENV ++ F + + L+ MNYQV ++ +G YG+ Q
Sbjct: 611 VYMDIVRYLXPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQVRMGMMAAGAYGLPQF 670
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFT---INGNLVANKTSHAPY--RSITVRDAI 342
R RV + ++P LP +P P H ++ T GN VA H +S+ + DAI
Sbjct: 671 RMRVFLWGARPTEILPQYPLPTHDVVSRGVTPTQFEGNAVAYDEGHQTQLGKSLFLDDAI 730
Query: 343 SDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRI---HDIHINLRELLQDHICKILSPL 397
SDLP V+ + + + PKT FQR+++ +++ +L DH L+P
Sbjct: 731 SDLPAVANNEERDEMPYGVAPKTEFQRLIRLSKEYLMGTSKDNSIQNVLYDHRPLQLNPD 790
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
R+ +P A +RDLP + V RG + K++++ + +
Sbjct: 791 DYARVCEVPKRKGACFRDLPGVRV---RGDN----KVEWDPEVPRVYL-----------A 832
Query: 458 QKNTIIP---WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
+IP S V+ +S RL WDE+ +P
Sbjct: 833 SGKPLIPDYAMSFVNGSSSKP-----FARLWWDET----------VP------------- 864
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
T+VT P N+ I+HPEQDRVLT+RE AR QGF D Y G I
Sbjct: 865 --------------TVVTRAEPHNQ--AIMHPEQDRVLTIRENARLQGFXDFYKLSGPIK 908
Query: 575 DMYKQIGNAVPPPLAKAIGYEI-IKCIGNAVPPPL 608
+ Y Q+GNAV P+A+A+GY + + G+A PL
Sbjct: 909 ERYMQVGNAVAVPVARALGYALGLALKGSAGADPL 943
>gi|348546083|ref|XP_003460508.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 183
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 110/199 (55%), Gaps = 48/199 (24%)
Query: 412 DWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSSSSCTSKGQKNT 461
DWRDLPNI V+L G + T+KL+Y KK+ VC C C
Sbjct: 1 DWRDLPNIEVRLKDG--TLTKKLRYTHHDKKNGRSGTGALRGVCTCAGGKPCDPS----- 53
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
D F NT+IPW L HT +R+N+W G+ GRL
Sbjct: 54 -------------------------DRQF------NTLIPWCLPHTGNRHNHWAGLYGRL 82
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
WD F T VT P P+ KQG++LHPEQ RV++VRE AR+QGFPD+Y F G I D ++Q+G
Sbjct: 83 EWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVG 142
Query: 582 NAVPPPLAKAIGYEIIKCI 600
NAVPPPL++AIG EI +CI
Sbjct: 143 NAVPPPLSRAIGLEIKRCI 161
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 19/214 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS- 176
L LD+F+GCGGL EG+ QAGVA+ W++E + A +Y N + V ++CN++L++
Sbjct: 1742 LDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1801
Query: 177 LLKGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+LK + ++ LP V L++ GPPCQG+S +NR +
Sbjct: 1802 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYSGMNRFNKGLW 1861
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
S+++N +V +LS+CD ++P+Y +LENV + E+ + + LL + YQV F +L
Sbjct: 1862 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1921
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF 312
+G++GV QSR R I A+ PG LP +P P H F
Sbjct: 1922 AGHFGVPQSRKRTFIWAALPGEVLPEWPTPRHVF 1955
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 75/268 (27%)
Query: 331 APYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQD 388
AP R++TVRDAI DLP + A + + P + FQR ++ + L+D
Sbjct: 2027 APLRTVTVRDAIGDLPPIDNDAKTDVLPYTAVPTSAFQRAIRGSAGSE---------LRD 2077
Query: 389 HICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCK 448
H+ K ++ L R C +PRG
Sbjct: 2078 HMVKQMNELNLER------------------CRCIPRG---------------------- 2097
Query: 449 SSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTA 508
+P + +W+ +L +A D S + + +++P+ L +TA
Sbjct: 2098 --------------VPGA---------DWRVLLKIVAEDPSREFF-KGESLVPFCLPNTA 2133
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
R+N W+G+ GRL F T T PNP+ K G++ HP+QDR+++VRE AR+QGFPD +
Sbjct: 2134 DRHNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFR 2193
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEI 596
F G + ++Q+GNAVPPPLA+A+G ++
Sbjct: 2194 FYGNVICRHRQVGNAVPPPLARALGQQL 2221
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 19/214 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS- 176
L LD+F+GCGGL EG+ QAGVA+ W++E + A +Y N + V ++CN++L++
Sbjct: 1757 LDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1816
Query: 177 LLKGHTQHKGVS------------------LPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
+LK + ++ LP V L++ GPPCQG+S +NR +
Sbjct: 1817 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYSGMNRFNKGLW 1876
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
S+++N +V +LS+CD ++P+Y +LENV + E+ + + LL + YQV F +L
Sbjct: 1877 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1936
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF 312
+G++GV QSR R I A+ PG LP +P P H F
Sbjct: 1937 AGHFGVPQSRKRTFIWAALPGEVLPEWPTPRHVF 1970
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 75/268 (27%)
Query: 331 APYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQD 388
AP R++TVRDAI DLP + A + + P + FQR ++ + L+D
Sbjct: 2042 APLRTVTVRDAIGDLPPIDNDAKTDVLPYTAVPTSAFQRAIRGSAGSE---------LRD 2092
Query: 389 HICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCK 448
H+ K ++ L R C +PRG
Sbjct: 2093 HMVKQMNELNLER------------------CRCIPRG---------------------- 2112
Query: 449 SSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTA 508
+P + +W+ +L +A D S + + +++P+ L +TA
Sbjct: 2113 --------------VPGA---------DWRVLLKIVAEDPSREFF-KGESLVPFCLPNTA 2148
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
R+N W+G+ GRL F T T PNP+ K G++ HP+QDR+++VRE AR+QGFPD +
Sbjct: 2149 DRHNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFR 2208
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEI 596
F G + ++Q+GNAVPPPLA+A+G ++
Sbjct: 2209 FYGNVICRHRQVGNAVPPPLARALGQQL 2236
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 27/241 (11%)
Query: 162 ECSVIQDDCNLVLKSLL-------------KGHTQHKGVS------LPQKHEVDLIVAGP 202
E +V D+CN++LK+++ + Q ++ LP EV+ I GP
Sbjct: 11 EAAVFVDNCNVILKAIMDKCGDSDDCVSTSEAAEQAAKLAEENIKNLPVPGEVEFINGGP 70
Query: 203 PCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIF 262
PCQGFS +NR + SK++ ++ FLSF + F+P++ +LENV V FNK + +
Sbjct: 71 PCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAV 130
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI--- 319
LL+M YQV F +L++G +GVAQSR R I A+ PG LP +P+P+H F++ I
Sbjct: 131 ASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGENLPDWPEPMHVFASPELKITLP 190
Query: 320 NGNL---VANKTSHAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSR 374
+G + + AP+R+ITVRD I DLP+V GA+ + + P + FQ+ ++ +R
Sbjct: 191 DGKYYAAAKSTAAGAPFRAITVRDTIGDLPKVENGASKLILEYGGEPTSWFQKKIRGSTR 250
Query: 375 I 375
+
Sbjct: 251 L 251
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 199/451 (44%), Gaps = 92/451 (20%)
Query: 169 DCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE----LEKSKLKN 223
DC +K + KGH ++ LP VD+I GPPCQG S NR R+ LE K N
Sbjct: 603 DCPERIKEFVEKGHKEN---ILPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEK--N 657
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
+ F+ +PKY+++ENV ++ F + + CL+ MNYQ ++ +G YG
Sbjct: 658 KQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYYG 717
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLH----------AFSNQLFTINGNLVANKTSHAPY 333
+ Q R R + + P LP FP P H FS + N +
Sbjct: 718 LPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPTTFSQSVVAYN-----EVDTRCLR 772
Query: 334 RSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSR-IHDIHINLRE-----L 385
+++ + DAISDLP+V Q + + PKT FQR +++ + I D +
Sbjct: 773 KALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGK 832
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DH L+ R++ IP A++RDL + V T +L N +++
Sbjct: 833 LFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-----PDNTVRLDPNISRER--- 884
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
S G K + +++ ++ GRL WDE+ +P
Sbjct: 885 --------LSSG-KPLVPDYAISFVKGKSTK---PFGRLWWDET----------VP---- 918
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
T+VT P N+ ILHP QDRVLT+RE AR QGFPD
Sbjct: 919 -----------------------TVVTRAEPHNQI--ILHPSQDRVLTIRENARLQGFPD 953
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
Y G + + Y Q+GNAV P+A+A+GY +
Sbjct: 954 YYRLIGPLKEKYIQVGNAVAIPVARALGYAL 984
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 202/466 (43%), Gaps = 92/466 (19%)
Query: 155 SYDANFQECSVIQ--DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
YD ++ I DC +K ++ HK LP VD+I GPPCQG S NR
Sbjct: 587 GYDPSYDTWEPIDGLSDCPERIKEFVE--KGHKDNILPLPGAVDVICGGPPCQGISGFNR 644
Query: 213 ARE----LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKM 268
R+ LE K N + F+ +PKY+++ENV ++ F + + CL+ M
Sbjct: 645 FRKHNDPLEDEK--NKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAM 702
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLH----------AFSNQLFT 318
NYQ ++ +G YG+ Q R R + + P LP FP P H FS +
Sbjct: 703 NYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPTTFSQSVVA 762
Query: 319 INGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSR-I 375
N + +++ + DAISDLP+V Q + + PKT FQR +++ + I
Sbjct: 763 YN-----EVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDI 817
Query: 376 HDIHINLRE-----LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSY 430
D + L DH L+ R++ IP A++RDL + V
Sbjct: 818 QDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-----PDN 872
Query: 431 TEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 490
T +L N +++ S G K + +++ ++ GRL WDE+
Sbjct: 873 TVRLDPNISRER-----------LSSG-KPLVPDYAISFVKGKSTK---PFGRLWWDET- 916
Query: 491 DMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDR 550
+P T+VT P N+ ILHP QDR
Sbjct: 917 ---------VP---------------------------TVVTRAEPHNQ--IILHPSQDR 938
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
VLT+RE AR QGFPD Y G + + Y Q+GNAV P+A+A+GY +
Sbjct: 939 VLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARALGYAL 984
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 204/467 (43%), Gaps = 94/467 (20%)
Query: 155 SYDANFQECSVIQ--DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN 211
YD ++ I DC +K + KGH ++ LP VD+I GPPCQG S N
Sbjct: 587 GYDPSYDTWEPIDGLSDCPERIKEFVEKGHKEN---ILPLPGAVDVICGGPPCQGISGFN 643
Query: 212 RARE----LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLK 267
R R+ LE K N + F+ +PKY+++ENV ++ F + + CL+
Sbjct: 644 RFRKHNDPLEDEK--NKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVA 701
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLH----------AFSNQLF 317
MNYQ ++ +G YG+ Q R R + + P LP FP P H FS +
Sbjct: 702 MNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPTTFSQSVV 761
Query: 318 TINGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSR- 374
N + +++ + DAISDLP+V Q + + PKT FQR +++ +
Sbjct: 762 AYN-----EVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKD 816
Query: 375 IHDIHINLRE-----LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHS 429
I D + L DH L+ R++ IP A++RDL + V
Sbjct: 817 IQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-----PD 871
Query: 430 YTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 489
T +L N +++ S G K + +++ ++ GRL WDE+
Sbjct: 872 NTVRLDPNISRER-----------LSSG-KPLVPDYAISFVKGKSTK---PFGRLWWDET 916
Query: 490 FDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD 549
+P T+VT P N+ ILHP QD
Sbjct: 917 ----------VP---------------------------TVVTRAEPHNQ--IILHPSQD 937
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
RVLT+RE AR QGFPD Y G + + Y Q+GNAV P+A+A+GY +
Sbjct: 938 RVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARALGYAL 984
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 199/442 (45%), Gaps = 83/442 (18%)
Query: 168 DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNG 224
D C +K + KG K LP EV++I GPPCQG S NR R + KN
Sbjct: 336 DGCQEKIKDFVAKGF---KASILPLPGEVEVICGGPPCQGVSGFNRFRNSKNPLGDSKNK 392
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ TF+ + P+++++ENV LV F + + L+ MNYQ ++ +G YG+
Sbjct: 393 QLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQTRMGMMVAGAYGL 452
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLH-----AFSNQLFTINGNLVANKTSHAPYRSITVR 339
Q R RV + + P KLP +P P H + F +N R + ++
Sbjct: 453 PQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKVELKRELFLK 512
Query: 340 DAISDLPRVS--QGANCYLFHNPPKT---HFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
DAISDLP V + + + + PK+ HF R +DG+ L +L DH L
Sbjct: 513 DAISDLPPVENDEPKDEMPYIDEPKSAFQHFIRSRRDGT--------LGSVLYDHRPLRL 564
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ R+ IP A++RDLP + V+ + T +L + ++ K
Sbjct: 565 NEDDYERVCQIPKRKGANFRDLPGVRVR-----ANNTVELDPDVERVK-----------V 608
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
+ G+ ++P T R + + GRL WDE I+P
Sbjct: 609 ASGK--PLVP-DYAITFVRGTSTKP-FGRLWWDE----------IVP------------- 641
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
T+VT P N+ ILHPEQDRVLT+RE AR QG PD Y G I
Sbjct: 642 --------------TVVTRAEPHNQV--ILHPEQDRVLTIRENARLQGLPDYYKLTGPIK 685
Query: 575 DMYKQIGNAVPPPLAKAIGYEI 596
+ Y Q+GNAV P+A+A+GY +
Sbjct: 686 ERYMQVGNAVAVPVARALGYSL 707
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 191/441 (43%), Gaps = 73/441 (16%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC LK + + K + LP +VD+I GPPCQG S NR R + KN +
Sbjct: 407 DCRECLKDFVTSGFKAKILPLP--GDVDVICGGPPCQGISGFNRFRNKDNPLQDEKNKQL 464
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F + +PK++++ENV +V F + + + L+ +NYQV ++ +G YG+ Q
Sbjct: 465 QVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHLNYQVRMGMMAAGAYGLPQ 524
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQ-----LFTINGNLVANKTSHAPYRSITVRDA 341
R R ++P KLP +P P H + F +N + + + DA
Sbjct: 525 FRMRAFFWGARPNQKLPQYPLPTHDLVLRGVIPVEFEMNTVGWEEGKKIELEKKLLLEDA 584
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
ISDLP V + + + PKT FQR ++
Sbjct: 585 ISDLPSVGNYEDKDEMDYEKEPKTEFQRFIR----------------------------- 615
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK-LKYNAKKKKSVCDCKSSSSCTSKGQ 458
+R +P F + + + P Y + L+ N + VC KG
Sbjct: 616 LRREEMPGFSSLNAK---------PTKHLLYDHRPLQLNTDDYQRVCRVPKR-----KGA 661
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAWD---ESFDMTGQKNTIIPWSLVHTASRNNNWQ 515
P +V++ ++ + WD E + K + +++ ++
Sbjct: 662 NFRDFPGVIVNSGNK----------VEWDPNVERVYLESGKPLVPDYAMSFVGGSSSK-- 709
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
RL WDE+ T+VT P N+ ILHP QDRVL++RE AR QGFPD Y G + +
Sbjct: 710 -PFARLWWDETVPTVVTRAEPHNQA--ILHPVQDRVLSIRENARLQGFPDYYKLFGPVKE 766
Query: 576 MYKQIGNAVPPPLAKAIGYEI 596
Y Q+GNAV P+++A+GY +
Sbjct: 767 RYIQVGNAVAVPVSRALGYAL 787
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 203/452 (44%), Gaps = 78/452 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ +K LPQ +VD+I GPPCQG S NR R + KN +
Sbjct: 307 DCPLKIKEFVQ--EGYKRNILPQPGQVDVICGGPPCQGISGFNRFRNRDNPLQDEKNQQM 364
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
T++ QPK++++ENV ++ F + + L+ +NYQ ++ +G YG+ Q
Sbjct: 365 VTYMDIVSYLQPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGMMVAGCYGLPQ 424
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + S P LP +P P H + N ++VA + P +++ + DA
Sbjct: 425 FRMRVFLWGSLPTMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQRPILKKALLLGDA 484
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP+V Q + PKT FQR ++ D S D +LL DH
Sbjct: 485 ISDLPKVDNYQPHEVIEYRGQPKTEFQRYIRLSRKDMLDYSFGDDTCPEEGKLL-DHQPL 543
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A+ RDLP + V G ++ E ++ + ++
Sbjct: 544 RLNQDDYDRVQQIPIKKGANSRDLPGVKV----GANNIVE---WDPEVERVYL------- 589
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
K K + +++ R+ GRL WDE+ +P
Sbjct: 590 ---KSGKPLVPDYAMSFIKGRSPK---PFGRLWWDET----------VP----------- 622
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLTVRE AR QGFPD Y G
Sbjct: 623 ----------------TVVTRAEPHNQ--IILHPNQGRVLTVRENARLQGFPDYYRMNGP 664
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
+ + Y Q+GNAV P+A+A+GY + + V
Sbjct: 665 MKEKYIQVGNAVAVPVARALGYSLGRAYQGEV 696
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 200/452 (44%), Gaps = 94/452 (20%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ HK LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 470 DCQLKIKEFVQ--EGHKRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNQQM 527
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PK++++ENV ++ F + + L+ +NYQ ++ +G YG+ Q
Sbjct: 528 VTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQARLGMMVAGCYGLPQ 587
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + + P LP +P P + + N ++VA + P +++ + DA
Sbjct: 588 FRMRVFLWGALPDMVLPKYPLPTYDVVVRGIVPNAFSQSVVAYDETQKPTLKKALLLGDA 647
Query: 342 ISDLPRVSQGANCYLFH------NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILS 395
ISDLP AN Y H PKT FQR ++ G + D+ L D+ C
Sbjct: 648 ISDLPE----ANNYQLHEVMEYGTKPKTEFQRYIRLGRK--DM---LDHSFGDNTCPEEG 698
Query: 396 PLMEM-----------RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L++ R++ IP A++RDLP I V G ++ E ++ + +
Sbjct: 699 KLLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGIKV----GANNIVE---WDPEVPRVY 751
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
K K + +++ R+ GRL WDE
Sbjct: 752 L----------KSGKPLVPDYAMSFIKGRSLK---PFGRLWWDE---------------- 782
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+ T+VT P N+ ILHP Q RVL+VRE AR QGFP
Sbjct: 783 ---------------------TVSTVVTRAEPHNQ--IILHPNQARVLSVRENARLQGFP 819
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
D Y G I + Y Q+GNAV P+A+A+GY +
Sbjct: 820 DYYRMNGPIKEKYIQVGNAVAVPVARALGYSL 851
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 224/532 (42%), Gaps = 112/532 (21%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLK 175
PL+ LD F+G G + + GV K ++E+ S A + N + + C NL+LK
Sbjct: 605 PLRTLDPFAGVGAFGMAMEETGVVKVTHAIEISPSAAKTLKRNAARDVKVYNQCANLILK 664
Query: 176 SLLKGHTQHKGVSLPQ--------------KHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
+K +H+G+ + + E+D IVAG PCQ S++N + SK
Sbjct: 665 QSIK---KHEGIPVDELKSIEDAPLPPPPLPDEIDCIVAGFPCQPHSRMNMYQRTTDSKT 721
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHF-------NKNEI--------LQCIFHCLL 266
L+ LS+ D +PKYI+ ENV G + F N++ I L+ + L
Sbjct: 722 Y--LMLNLLSWVDYIKPKYIMFENVRGFLSFRLRARQKNRHTITGGIEMGGLKFLIRALT 779
Query: 267 KMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVAN 326
+M+YQ F VLQ+ +YG Q R R ++ ++ G LP PQP H F + + +L
Sbjct: 780 EMDYQCRFAVLQAAHYGTPQGRVRFFLVGARRGLPLPDLPQPSHDFPLEDALVI-HLPGG 838
Query: 327 KTSH--------APYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDI 378
+ H AP+R +TV DAI DL R + + P H Q + +
Sbjct: 839 RDVHPILAVQGTAPHRFVTVEDAIGDLKR-------FDWRKPNPAHPQANGNNNA----- 886
Query: 379 HINLRELLQDH---ICKILSPLMEMRIRLIPSFPNADW-RDLPNICVKLPRGQHSYTEKL 434
+ L ++ D+ C P + P W R P+ ++ Q++ T
Sbjct: 887 -LQLPSVVCDNERAFCGYQGPSATVGYESEPRNTFQAWARSRPSTDIQ----QYTRT--- 938
Query: 435 KYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS---RNNNWQGVLGRLAWDESFD 491
Y K V + + + W + +S R G+ GR+ D+ F
Sbjct: 939 -YEPTKVARVMSVPMQAGADYRSIPRELWEWQFANPSSAVARGGFRAGMYGRIDQDKWFQ 997
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRV 551
T VT +P KQ K+L+P R+
Sbjct: 998 TT-------------------------------------VTNVDPTAKQCKVLNPWCKRM 1020
Query: 552 LTVREYARAQGFPDSYVFRGG---ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+TVRE AR+QGFPD +VF G I M++QIGNAVP ++ A+ E+ +
Sbjct: 1021 VTVRELARSQGFPDHFVFYAGADRILTMHRQIGNAVPWQVSIALARELRSVV 1072
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 187/421 (44%), Gaps = 77/421 (18%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R + KN + FL D +P Y+++ENV
Sbjct: 386 LPLPGTVYSVCGGPPCQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENV 445
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 446 VDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGSYGLPQVRNRVFLWAAQPTEKLPPYP 505
Query: 307 QPLHAFSNQLFT------INGNLVANKTSHAPYRSITVRDAISDLPRVSQG-ANCYLFHN 359
P H + T + L+ + ++T+ DAISDLP V+ AN +N
Sbjct: 506 LPTHEVEKKYNTPKEFEDLQVGLIQKELLQLD-NALTLADAISDLPPVTNSEANDVRNYN 564
Query: 360 --PPKTHFQRM--MKDGSRIHDIHIN--LRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
PKT F+ +K + + R L H ++ +E RI IP A++
Sbjct: 565 DAAPKTDFENFISLKRSETLLPVCGGDPARRLFDHHPLELRDDDLE-RISYIPKKKGANF 623
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASR 473
RD+P + V H+ +L K+ K K KN + +++ +
Sbjct: 624 RDMPGVLV------HNNKAQLNLRVKRAK------------LKSGKNVVPDYAVSFIKGK 665
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
+ + GRL W DE +T+VT
Sbjct: 666 S---KKPFGRLWW-------------------------------------DEIVNTVVTR 685
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+ A+G
Sbjct: 686 AEPHNQC--VIHPMQERVLSVRENARLQGFPDCYKLCGSIKEKYIQVGNAVAVPVGVALG 743
Query: 594 Y 594
Y
Sbjct: 744 Y 744
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 217/544 (39%), Gaps = 157/544 (28%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN-LVL 174
T + LDLFSG GGL G+ G W+VE + ++ NF + V D N
Sbjct: 825 TQMNTLDLFSGAGGLALGVTMTGALAVKWAVEKSIPASQTFRRNFPDAQVYTQDINECAS 884
Query: 175 KSLLKGHTQHKGVSL----------PQKHEVDLIVAGPPCQGFS-QLNRARELEKSKLKN 223
+L +G +H+ SL P VD+I+AG PC GFS Q R+ +++++
Sbjct: 885 NALRRGQARHRVPSLDPQNPRKRHMPPPQAVDVILAGLPCSGFSMQSVYGRDTKEAQV-- 942
Query: 224 GLVFTFL-SFCDLFQPKYIILENVTGLVHFNKNE----------ILQCIFHCLLKMNYQV 272
GLV + ++P++ I+ENV ++++ + I++ I L + Y V
Sbjct: 943 GLVLVARGTHKASYRPRFFIIENVARMINYESLDYSTEETISFAIVKIILRTLTALGYSV 1002
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN------QLFTINGNLVAN 326
+ + + NYG Q R+R+ S+ G +LP P P H S Q FT LV
Sbjct: 1003 RWGLFNAVNYGSPQHRSRLFFYGSRGGSRLPEIPIPTHVASKNSRTRFQRFT----LVPT 1058
Query: 327 KTSH--APYRSITVRDAISDLP-----------RVSQGAN-------------------- 353
K H A + + AI DLP V+Q AN
Sbjct: 1059 KLMHYLAALPPVNISSAIGDLPPFDWTVRNPLSGVTQRANVPSFIGESPAGSSTAGYPHG 1118
Query: 354 CYLFHNPPKTHFQRMMKDGSRI-HDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
C PKT +Q M+ G + + ++ ++H K ++ + PNAD
Sbjct: 1119 CDYQQERPKTLYQARMRRGMHVGKKVTLHYTRTFKEHSHKA------EKVIAVAMRPNAD 1172
Query: 413 WRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVH--T 470
R +P + + W+ H +
Sbjct: 1173 HRTIPRV------------------------------------------LYDWAYSHPLS 1190
Query: 471 ASRNNNWQ-GVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDT 529
A+ + W G GRL W QGV F++
Sbjct: 1191 AAARDLWAPGRYGRLDW----------------------------QGV---------FNS 1213
Query: 530 IVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
VT +P +KQGK+LHP Q RVLT+RE AR QGFPD Y F G + +QIG AVP +
Sbjct: 1214 FVTRIDPTSKQGKVLHPSQRRVLTIREVARGQGFPDHYQFCGDPGAIIRQIGEAVPVQMG 1273
Query: 590 KAIG 593
+A+G
Sbjct: 1274 EALG 1277
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 86/433 (19%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP VD++ GPPCQG S NR R L KN + +++ + +PK++
Sbjct: 440 YKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFV 499
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV ++ K + + LL+MNYQV ++ +G YG+AQ R R + + P
Sbjct: 500 LMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEI 559
Query: 302 LPSFPQPLHAF---SNQLFTINGNLVANKTSHAPYRS--ITVRDAISDLPRV--SQGANC 354
+P FP P H N + GN+VA H + + ++D ISDLP V S+ +
Sbjct: 560 IPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDE 619
Query: 355 YLFHNPPKTHFQRMMK----DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ P T FQ+ ++ + S + + +L DH L+ R+ +P
Sbjct: 620 ITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKG 679
Query: 411 ADWRDLPNI------CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
A++RD P + VKL G+ E++K + K T++P
Sbjct: 680 ANFRDFPGVIVGPGNVVKLEEGK----ERVKLESGK--------------------TLVP 715
Query: 465 -WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAW 523
++L + ++ GRL WDE I+P
Sbjct: 716 DYALTYVDGKSCK---PFGRLWWDE----------IVP---------------------- 740
Query: 524 DESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
T+VT P N+ I+HPEQ+RVL++RE AR QGFPD Y G Y Q+GNA
Sbjct: 741 -----TVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNA 793
Query: 584 VPPPLAKAIGYEI 596
V P+AKA+GY +
Sbjct: 794 VAVPVAKALGYAL 806
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 86/433 (19%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP VD++ GPPCQG S NR R L KN + +++ + +PK++
Sbjct: 440 YKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFV 499
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV ++ K + + LL+MNYQV ++ +G YG+AQ R R + + P
Sbjct: 500 LMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEI 559
Query: 302 LPSFPQPLHAF---SNQLFTINGNLVANKTSHAPYRS--ITVRDAISDLPRV--SQGANC 354
+P FP P H N + GN+VA H + + ++D ISDLP V S+ +
Sbjct: 560 IPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDE 619
Query: 355 YLFHNPPKTHFQRMMK----DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ P T FQ+ ++ + S + + +L DH L+ R+ +P
Sbjct: 620 ITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKG 679
Query: 411 ADWRDLPNI------CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
A++RD P + VKL G+ E++K + K T++P
Sbjct: 680 ANFRDFPGVIVGPGNVVKLEEGK----ERVKLESGK--------------------TLVP 715
Query: 465 -WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAW 523
++L + ++ GRL WDE I+P
Sbjct: 716 DYALTYVDGKSCK---PFGRLWWDE----------IVP---------------------- 740
Query: 524 DESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
T+VT P N+ I+HPEQ+RVL++RE AR QGFPD Y G Y Q+GNA
Sbjct: 741 -----TVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNA 793
Query: 584 VPPPLAKAIGYEI 596
V P+AKA+GY +
Sbjct: 794 VAVPVAKALGYAL 806
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 86/433 (19%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP VD++ GPPCQG S NR R L KN + +++ + +PK++
Sbjct: 440 YKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFV 499
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV ++ K + + LL+MNYQV ++ +G YG+AQ R R + + P
Sbjct: 500 LMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEI 559
Query: 302 LPSFPQPLHAF---SNQLFTINGNLVANKTSHAPYRS--ITVRDAISDLPRV--SQGANC 354
+P FP P H N + GN+VA H + + ++D ISDLP V S+ +
Sbjct: 560 IPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDE 619
Query: 355 YLFHNPPKTHFQRMMK----DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ P T FQ+ ++ + S + + +L DH L+ R+ +P
Sbjct: 620 ITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKG 679
Query: 411 ADWRDLPNI------CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
A++RD P + VKL G+ E++K + K T++P
Sbjct: 680 ANFRDFPGVIVGPGNVVKLEEGK----ERVKLESGK--------------------TLVP 715
Query: 465 -WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAW 523
++L + ++ GRL WDE I+P
Sbjct: 716 DYALTYVDGKSCK---PFGRLWWDE----------IVP---------------------- 740
Query: 524 DESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
T+VT P N+ I+HPEQ+RVL++RE AR QGFPD Y G Y Q+GNA
Sbjct: 741 -----TVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNA 793
Query: 584 VPPPLAKAIGYEI 596
V P+AKA+GY +
Sbjct: 794 VAVPVAKALGYAL 806
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 196/433 (45%), Gaps = 86/433 (19%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP VD++ GPPCQG S NR R L KN + +++ + +PK++
Sbjct: 440 YKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFV 499
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV ++ K + + LL+MNYQV ++ +G YG+AQ R R + + P
Sbjct: 500 LMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEI 559
Query: 302 LPSFPQPLHAF---SNQLFTINGNLVANKTSHAPYRS--ITVRDAISDLPRV--SQGANC 354
+P FP P H N + GN+VA H + + ++D ISDLP V S+ +
Sbjct: 560 IPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDE 619
Query: 355 YLFHNPPKTHFQRMMK----DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ P T FQ+ ++ + S + + +L DH L+ R+ +P
Sbjct: 620 ITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKG 679
Query: 411 ADWRDLPNI------CVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
A++RD P + VKL G+ E++K + K T++P
Sbjct: 680 ANFRDFPGVIVGPGNVVKLEEGK----ERVKLESGK--------------------TLVP 715
Query: 465 -WSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAW 523
++L + ++ GRL WDE I+P
Sbjct: 716 DYALTYVDGKSCK---PFGRLWWDE----------IVP---------------------- 740
Query: 524 DESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
T+VT P N+ I+HPEQ+RVL++RE AR QGFPD Y G Y Q+GNA
Sbjct: 741 -----TVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNA 793
Query: 584 VPPPLAKAIGYEI 596
V P+AKA+GY +
Sbjct: 794 VAVPVAKALGYAL 806
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 199/455 (43%), Gaps = 76/455 (16%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC+ +K + + K + LP +VD+I GPPCQG S NR R +K KN +
Sbjct: 191 DCHDKIKEFVVNGFKSKLLPLP--GDVDVITGGPPCQGISGFNRFRNKDKPLEDEKNKQL 248
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
++ + +P++ ++ENV ++ F K + + L+ MNY ++ +G+YG+ Q
Sbjct: 249 VVYMDIVEYLKPRFCLMENVVDIIRFAKGFLGRYALGRLVSMNYIARVGLMVAGSYGLPQ 308
Query: 287 SRNRVVILASKPGYKLPSFPQPLH-----AFSNQLFTINGNLVANKTSHAPYRSITVRDA 341
R R+ + ++P KLP +P P H S F N + + + + + DA
Sbjct: 309 FRRRMFMWGARPSEKLPQYPLPTHNVVTRGVSPLEFESNTVVHDDGAKVELEKELYLGDA 368
Query: 342 ISDLPRV--SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLM- 398
ISDLP V + + + PKT FQ+ + + + DH+ PL
Sbjct: 369 ISDLPPVPNDEARDEMPYGEKPKTEFQKFISLKKTDMPGFVGSGQDASDHLLYDHRPLKL 428
Query: 399 ----EMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
R+ IP A++RDL + VK ++ E D
Sbjct: 429 NDDDYQRVCQIPKKKGANFRDLKGVRVK----ADNHVE------------WDPDVDRVYI 472
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
G K + +++ R+ + GRL WD++ +P
Sbjct: 473 PSG-KPLVPDYAMTFVGGRS---EKPFGRLWWDDT----------VP------------- 505
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
T+VT P N+ ILHP QDRVLT+RE AR QGFPD Y G I
Sbjct: 506 --------------TVVTRAEPHNQ--AILHPLQDRVLTIRENARLQGFPDYYKLLGPIK 549
Query: 575 DMYKQIGNAVPPPLAKAIGYEI-IKCIGNAVPPPL 608
+ Y Q+GNAV P+A+A+GY + + C GNA P+
Sbjct: 550 ERYIQVGNAVAVPVARALGYSLAMSCNGNAGTEPV 584
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 200/451 (44%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L ++ ++ H+ LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 486 DCPLKIREFVQ--EGHRRRILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 543
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 544 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 603
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + T N +VA P+ +++ + DA
Sbjct: 604 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGNTPNAFSQCMVAYDEKQKPHLKKALLLGDA 663
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP+V Q + PKT FQR ++ D S + + +LL +
Sbjct: 664 ISDLPKVENHQPKEVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEEAGPDKGKLLDHQPLR 723
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
+ + E R++ IP A++RDL + V G ++ E + K S
Sbjct: 724 LNNDDYE-RVQQIPVKKGANFRDLKGVKV----GANNIVEWDPEIERVKLSSGKPLVPDY 778
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S + ++ P+ GRL WDE+ +P
Sbjct: 779 AMSFIKGKSLKPF----------------GRLWWDET----------VP----------- 801
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLT+RE AR QGFPD Y G
Sbjct: 802 ----------------TVVTRAEPHNQI--ILHPTQARVLTIRENARLQGFPDYYRLFGP 843
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 844 IKEKYIQVGNAVAVPVARALGY----CLGQA 870
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 200/443 (45%), Gaps = 85/443 (19%)
Query: 168 DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNG 224
D C +K + KG K LP EV +I GPPCQG S NR R + KN
Sbjct: 335 DGCQEKIKDFVTKGF---KASILPLPGEVAVICGGPPCQGVSGFNRFRNSKNPLGDSKNK 391
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ TF+ + P+++++ENV LV F + + L+ M+YQ ++ +G YG+
Sbjct: 392 QLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMDYQARMGMMVAGAYGL 451
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAF---SNQLFTINGNLVANKT---SHAPYRSITV 338
Q R RV + + P LP +P P H N+VA S A R+ +
Sbjct: 452 PQFRRRVFMWGALPSENLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKSRAKERTF-L 510
Query: 339 RDAISDLPRV--SQGANCYLFHNPPKT---HFQRMMKDGSRIHDIHINLRELLQDHICKI 393
+DAISDLP V + + + + PK+ HF R +DG+ L +L DH
Sbjct: 511 KDAISDLPPVENDEPRDEMPYIDEPKSAFQHFIRSRRDGA--------LGSVLYDHRPLR 562
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSC 453
L+ R+ IP A++RDLP + V+ + T +L + ++ K
Sbjct: 563 LNEDDYERVCQIPKRKGANFRDLPGVRVR-----ANNTVELDPDVERVK----------- 606
Query: 454 TSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNN 513
+ G+ ++P T R + + GRL WDE I+P
Sbjct: 607 VASGK--PLVP-DYAITFVRGTSTK-PFGRLWWDE----------IVP------------ 640
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
T+VT P N+ ILHPEQDRVLT+RE AR QGFPD Y G I
Sbjct: 641 ---------------TVVTRAEPHNQ--VILHPEQDRVLTIRENARLQGFPDYYKLTGPI 683
Query: 574 CDMYKQIGNAVPPPLAKAIGYEI 596
+ Y Q+GNAV P+A+A+GY +
Sbjct: 684 KERYMQVGNAVAVPVARALGYSL 706
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 194/448 (43%), Gaps = 80/448 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP VD++ GPPCQG S NR R L + KN + +++ + +PKY+++ENV
Sbjct: 445 LPLPGGVDVVCGGPPCQGISGHNRFRNLLEPLKDEKNKQLLVYMNIVEFLKPKYVLMENV 504
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ ++ + + L++MNYQV ++ +G YG+AQ R R + + P +P FP
Sbjct: 505 VDMLKMSEGYLARYAVGRLIQMNYQVRMGMMAAGAYGLAQFRLRFFLWGALPSMMIPQFP 564
Query: 307 QPLHAF---SNQLFTINGNLVANKTSHAPYRS--ITVRDAISDLPRV--SQGANCYLFHN 359
P H N + GN VA H + + +RD ISDLP V S+ + +
Sbjct: 565 LPTHDLVQRGNIVKEFQGNTVAYDEGHTVKLADKLLLRDVISDLPAVDNSEQRDEIPYDQ 624
Query: 360 PPKTHFQ---RMMKD---GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
P T FQ R+ KD GS + + +L DH L+ R+ +P A++
Sbjct: 625 DPVTPFQQFIRLRKDEALGSLTKS--KSKKHVLYDHHPLNLNINDYQRVCRVPKRKGANF 682
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASR 473
RD P + V P E +K + K + + + K
Sbjct: 683 RDFPGVIVG-PGNVVHLDEDMKIMLQSGKQLVPNYALTFVDGTSSKP------------- 728
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
GRL WDE I+P T+VT
Sbjct: 729 -------FGRLWWDE----------IVP---------------------------TVVTR 744
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
P N+ I+HP QDRVL++RE AR QGFPD Y G Y Q+GNAV P+AKA+G
Sbjct: 745 AEPHNQV--IIHPTQDRVLSIRENARLQGFPDDYKLFGPTKQKYIQVGNAVAVPVAKALG 802
Query: 594 YEI---IKCIGNAVPPPLAKAIGYEIIK 618
Y + + + + P L G+ +K
Sbjct: 803 YALGIAFQGLADGKDPLLTLPEGFAFMK 830
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 199/444 (44%), Gaps = 78/444 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 480 DCPLKIKEFVQEGYRRKILPLP--GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQM 537
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + L+ M YQ ++ +G YG+ Q
Sbjct: 538 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQ 597
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + + P LP +P P H + N ++VA + P ++ + DA
Sbjct: 598 FRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDA 657
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP V+ Q + + PKT FQR ++ D S +L +LL DH
Sbjct: 658 ISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLL-DHQPL 716
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E D
Sbjct: 717 KLNKDDHERVQQIPVKKGANFRDLKGVRV----GANNIVE------------WDPDVPRV 760
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S G K + +++ R+ GRL WDE+ +P
Sbjct: 761 YLSSG-KPLVPDYAMSFIKGRSLK---PFGRLWWDET----------VP----------- 795
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLTVRE AR QGFPD Y G
Sbjct: 796 ----------------TVVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGP 837
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
I + Y Q+GNAV P+A+A+GY +
Sbjct: 838 IKEKYIQVGNAVAVPVARALGYSL 861
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 199/444 (44%), Gaps = 78/444 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 480 DCPLKIKEFVQEGYRRKILPLP--GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQM 537
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + L+ M YQ ++ +G YG+ Q
Sbjct: 538 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQ 597
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + + P LP +P P H + N ++VA + P ++ + DA
Sbjct: 598 FRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDA 657
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP V+ Q + + PKT FQR ++ D S +L +LL DH
Sbjct: 658 ISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLL-DHQPL 716
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E D
Sbjct: 717 KLNKDDHERVQQIPVKKGANFRDLKGVRV----GANNIVE------------WDPDVPRV 760
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S G K + +++ R+ GRL WDE+ +P
Sbjct: 761 YLSSG-KPLVPDYAMSFIKGRSLK---PFGRLWWDET----------VP----------- 795
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLTVRE AR QGFPD Y G
Sbjct: 796 ----------------TVVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGP 837
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
I + Y Q+GNAV P+A+A+GY +
Sbjct: 838 IKEKYIQVGNAVAVPVARALGYSL 861
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 19/210 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++GV+ W++E E ++ N E V +CN+ L+++
Sbjct: 18 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNVFLRAV 77
Query: 178 LK-------------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ +++ SLP +VD I GPPCQGFS +NR +
Sbjct: 78 MQKCGDAEDCISTPEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 137
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQ 278
SK++ ++ FLSF D ++PKY +LENV V FN+ + + LL+M YQV F +L+
Sbjct: 138 SKVQCEMILAFLSFADYYRPKYFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 197
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQP 308
+G +GV QSR R I A+ P LP +P+P
Sbjct: 198 AGAFGVPQSRKRAFIWAASPEEILPEWPEP 227
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 199/444 (44%), Gaps = 78/444 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 480 DCPLKIKEFVQEGYRRKILPLP--GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQM 537
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + L+ M YQ ++ +G YG+ Q
Sbjct: 538 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQ 597
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + + P LP +P P H + N ++VA + P ++ + DA
Sbjct: 598 FRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDA 657
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP V+ Q + + PKT FQR ++ D S +L +LL DH
Sbjct: 658 ISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLL-DHQPL 716
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E D
Sbjct: 717 KLNKDDHERVQQIPVKKGANFRDLKGVRV----GANNIVE------------WDPDVPRV 760
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S G K + +++ R+ GRL WDE+ +P
Sbjct: 761 YLSSG-KPLVPDYAMSFIKGRSLK---PFGRLWWDET----------VP----------- 795
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLTVRE AR QGFPD Y G
Sbjct: 796 ----------------TVVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGP 837
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
I + Y Q+GNAV P+A+A+GY +
Sbjct: 838 IKEKYIQVGNAVAVPVARALGYSL 861
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 188/419 (44%), Gaps = 74/419 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFTIN--GNLVANKTSHAPYR---SITVRDAISDLPRVSQG-ANCYLFHN- 359
P H + + T +L + + ++T+ DAISDLP V+ AN + +N
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYND 581
Query: 360 -PPKTHFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
PKT F+ + + + + + L DH +L R+ IP A++RD
Sbjct: 582 AAPKTEFENFISLKRSETLLPAFGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRD 641
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+P + V + K + N + + + K KN + +++ ++
Sbjct: 642 MPGVLV--------HNNKAEINPRFRAKL-----------KSGKNVVPAYAISFIKGKS- 681
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GRL W DE +T+VT
Sbjct: 682 --KKPFGRL-----------------WG--------------------DEIVNTVVTRAE 702
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+ A+GY
Sbjct: 703 PHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALGY 759
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 189/443 (42%), Gaps = 82/443 (18%)
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVF 227
C +K +K ++ LP +VD I GPPCQG S NR R E KN +
Sbjct: 411 CKKSVKEFVK--KGYRSSILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLV 468
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
F+ + +PKY+++ENV ++ F + + L+ MNYQ ++ +G+YGV Q
Sbjct: 469 VFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQY 528
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPY-----------RSI 336
R RV + + P KLP +P P H I +V N+ +++
Sbjct: 529 RMRVFLWGAHPMEKLPPYPLPTHD------VIGRGVVPNEFEEITVGYDKSELCKLEKAL 582
Query: 337 TVRDAISDLPRVSQ--GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
+ DAISDLP V+ G + ++ T FQR ++ R HD+
Sbjct: 583 FLGDAISDLPPVTNYNGQDEMPYNKAAHTEFQRYIR--LRKHDM---------------- 624
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ S D + P + P L+ N + VC
Sbjct: 625 ---------VYCSDAEKDASEPPMLYDHRP---------LQLNEDDNERVCRIPKK---- 662
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFD---MTGQKNTIIPWSLVHTASRN 511
KG +P +V G R+ WD S + + K + +++ ++
Sbjct: 663 -KGANFRDLPGVMV----------GSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKS 711
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
RL WDE T+VT P N+ I+HP QDRVLT+RE AR QGFPD Y G
Sbjct: 712 TK---PFARLWWDEIVATVVTRAEPHNQA--IIHPTQDRVLTIRENARFQGFPDCYKLCG 766
Query: 572 GICDMYKQIGNAVPPPLAKAIGY 594
+ + Y Q+GNAV P+A A+GY
Sbjct: 767 PVKERYIQVGNAVAVPVALALGY 789
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 189/443 (42%), Gaps = 82/443 (18%)
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVF 227
C +K +K ++ LP +VD I GPPCQG S NR R E KN +
Sbjct: 413 CKKSVKEFVK--KGYRSSILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLV 470
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
F+ + +PKY+++ENV ++ F + + L+ MNYQ ++ +G+YGV Q
Sbjct: 471 VFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQY 530
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPY-----------RSI 336
R RV + + P KLP +P P H I +V N+ +++
Sbjct: 531 RMRVFLWGAHPMEKLPPYPLPTHD------VIGRGVVPNEFEEITVGYDKSELCKLEKAL 584
Query: 337 TVRDAISDLPRVSQ--GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
+ DAISDLP V+ G + ++ T FQR ++ R HD+
Sbjct: 585 FLGDAISDLPPVTNYNGQDEMPYNKAAHTEFQRYIR--LRKHDM---------------- 626
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+ S D + P + P L+ N + VC
Sbjct: 627 ---------VYCSDAEKDASEPPMLYDHRP---------LQLNEDDNERVCRIPKK---- 664
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFD---MTGQKNTIIPWSLVHTASRN 511
KG +P +V G R+ WD S + + K + +++ ++
Sbjct: 665 -KGANFRDLPGVMV----------GSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKS 713
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
RL WDE T+VT P N+ I+HP QDRVLT+RE AR QGFPD Y G
Sbjct: 714 TK---PFARLWWDEIVATVVTRAEPHNQA--IIHPTQDRVLTIRENARFQGFPDCYKLCG 768
Query: 572 GICDMYKQIGNAVPPPLAKAIGY 594
+ + Y Q+GNAV P+A A+GY
Sbjct: 769 PVKERYIQVGNAVAVPVALALGY 791
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 188/419 (44%), Gaps = 74/419 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFTIN--GNLVANKTSHAPYR---SITVRDAISDLPRVSQG-ANCYLFHN- 359
P H + + T +L + + ++T+ DAISDLP V+ AN + +N
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYND 581
Query: 360 -PPKTHFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
PKT F+ + + + + + L DH +L R+ IP A++RD
Sbjct: 582 AAPKTEFENFISLKRSETLLPACGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRD 641
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+P + V + K + N + + + K KN + +++ ++
Sbjct: 642 MPGVLV--------HNNKAEINPRFRAKL-----------KSGKNVVPAYAISFIKGKS- 681
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GRL W DE +T+VT
Sbjct: 682 --KKPFGRL-----------------WG--------------------DEIVNTVVTRAE 702
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+ A+GY
Sbjct: 703 PHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALGY 759
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 188/419 (44%), Gaps = 74/419 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFTIN--GNLVANKTSHAPYR---SITVRDAISDLPRVSQG-ANCYLFHN- 359
P H + + T +L + + ++T+ DAISDLP V+ AN + +N
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYND 581
Query: 360 -PPKTHFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
PKT F+ + + + + + L DH +L R+ IP A++RD
Sbjct: 582 AAPKTEFENFISLKRSETLLPACGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRD 641
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+P + V + K + N + + + K KN + +++ ++
Sbjct: 642 MPGVLV--------HNNKAEINPRFRAKL-----------KSGKNVVPAYAISFIKGKS- 681
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GRL W DE +T+VT
Sbjct: 682 --KKPFGRL-----------------WG--------------------DEIVNTVVTRAE 702
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+ A+GY
Sbjct: 703 PHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALGY 759
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 202/452 (44%), Gaps = 94/452 (20%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ HK LP +V++I GPPCQG S NR R ++ KN +
Sbjct: 471 DCPLKIKEFVQ--EGHKRNILPLPGDVEVICGGPPCQGISGFNRFRNRKEPLKDEKNQQM 528
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PK++++ENV ++ F + + L+ +NYQ ++ +G YG+ Q
Sbjct: 529 VTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGIMVAGCYGLPQ 588
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRDA 341
R RV + + P LP +P P H + N ++VA + P +++ + DA
Sbjct: 589 FRMRVFLWGALPAMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQKPTLKKALLLGDA 648
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQ----DHICKILS 395
ISDLP+ + Q + PKT FQ I ++ +++L D+ C
Sbjct: 649 ISDLPKANNFQPHEVMEYGAQPKTEFQSY---------IRLSRKDMLDYSFGDNTCPEEG 699
Query: 396 PLMEM-----------RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSV 444
L++ R++ IP A++RDLP + V G ++ E ++ + ++
Sbjct: 700 KLLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGVKV----GANNIVE---WDPEVQRVY 752
Query: 445 CDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSL 504
K K + +++ R+ GRL WDE+ +P
Sbjct: 753 L----------KSGKPLVPDYAMSFIKGRSLK---PFGRLWWDET----------VP--- 786
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
T+VT P N+ ILHP Q RVLTVRE AR QGFP
Sbjct: 787 ------------------------TVVTRAEPHNQ--IILHPNQARVLTVRENARLQGFP 820
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
D Y G I + Y Q+GNAV P+A+A+GY +
Sbjct: 821 DYYRMNGPIKEKYIQVGNAVAVPVARALGYSL 852
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 144/284 (50%), Gaps = 50/284 (17%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
M +PL+ L+LF+G GGL G ++G K W+VEL S +Y+ N V N
Sbjct: 854 MDSHSPLRGLELFAGAGGLSTGFDESGYVKTMWAVELGASACLTYEENHPYAQVYHGSVN 913
Query: 172 LVLKSLLKGH---------TQHKGVSLP---QKHEVDLIVAGPPCQGFSQLNRARELEKS 219
L+ ++ + ++ G LP + EVD I GPPCQGFS++N +R ++
Sbjct: 914 TTLRHAIEAYEGQDPEPLISEELGQELPPMPRPGEVDFIYGGPPCQGFSRMNHSRTVDD- 972
Query: 220 KLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF----------NKNE------ILQCIFH 263
+N LV LS+ + + PK+ +LENV G+++ K E +++ I
Sbjct: 973 -YRNTLVCNMLSYVEFYHPKFFMLENVEGILYHPLAATQSGPGRKMEGGVRMGVVKLILR 1031
Query: 264 CLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTIN 320
L + YQV F +LQ+G YG QSR RV+ L ++ G LPSFP P H ++ Q+ +
Sbjct: 1032 TLTSLGYQVHFKLLQAGQYGAPQSRLRVIFLGAQRGLPLPSFPIPTHCTADDVQQIKLVT 1091
Query: 321 GNL--------------VANKTS---HAPYRSITVRDAISDLPR 347
GNL V N+ + AP+ ++V DAISDLP+
Sbjct: 1092 GNLLRPAVRIIPFEDKDVVNRKAWLQFAPHLRVSVEDAISDLPK 1135
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF----RGG 572
+ R+ F T +T+ NP K G++LHP Q RVLT+RE+ARAQGFPD F
Sbjct: 1265 IYARVNGKWHFQTALTSANPNAKGGRLLHPTQKRVLTIREFARAQGFPDQQKFLSIKENA 1324
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
D +Q+GNAVP PLA A+G I
Sbjct: 1325 FEDQQRQVGNAVPVPLAFALGKSI 1348
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 202/451 (44%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L ++ ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 488 DCPLKIREFVQEGRKRKILPLP--GDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 545
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 546 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 605
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 606 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQRPSLKKALLLGDA 665
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
SDLP+V Q + + PKT FQR ++ D S + + +LL +
Sbjct: 666 FSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLR 725
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
+ + E R++ IP A++RDL + V G ++ E D +
Sbjct: 726 LNNDDYE-RVKQIPVKKGANFRDLKGVKV----GANNVVE------------WDPEVERV 768
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S G K + +++ ++ GRL WDE+ +P
Sbjct: 769 YLSSG-KPLVPDYAMSFIKGKSLK---PFGRLWWDET----------VP----------- 803
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLT+RE AR QGFPD Y G
Sbjct: 804 ----------------TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGP 845
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 846 IKEKYIQVGNAVAVPVARALGY----CLGQA 872
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 198/453 (43%), Gaps = 87/453 (19%)
Query: 169 DCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE----LEKSKLKN 223
DC +K + KG+ + LP + + I GPPCQG S NR R LE +K K
Sbjct: 411 DCKEAMKDFVTKGYKKRL---LPLPGDANFICGGPPCQGVSGFNRFRNAAAPLEDTKNKQ 467
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
LV+ + D +PKY+++ENV ++ F+ + + L+ MNYQ ++ +G+YG
Sbjct: 468 LLVY--MDIIDFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGSYG 525
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLH------AFSNQLFTINGNLVANKTSHAPYRSIT 337
+ Q R RV + ++P KLP +P P H + + I T H ++
Sbjct: 526 LPQFRMRVFLWGARPTEKLPPYPLPTHEVVSRGSVPTEFEEITVAYDKKDTCHLA-GALL 584
Query: 338 VRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMK------DGSRIHDIHINLRELLQDH 389
+ DAISDLP V+ N + P +T FQ+ ++ GS + +L DH
Sbjct: 585 LEDAISDLPHVTNDENQDERNYEAPSETEFQKYIRLKKNEMVGS-MASAQSAPDRILYDH 643
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKS 449
L+ R+ IP A++RDLP + V K++++ ++ + D
Sbjct: 644 RPLQLNKDDYERVCQIPQKKGANFRDLPGVLVN--------GNKVQWDPSVQRVMLD--- 692
Query: 450 SSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS 509
K + +++ ++ GRL WD
Sbjct: 693 -------SGKPLVPDYAMTFVRGTSSK---PFGRLWWD---------------------- 720
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
E T+VT P N+ ILHP Q+RVLT+RE AR QGFPD Y
Sbjct: 721 ---------------EIVSTVVTRAEPHNQA--ILHPTQNRVLTIRENARLQGFPDCYKL 763
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEI-IKCIG 601
G + + Y Q+GNAV P+A A+GY + C G
Sbjct: 764 CGPVKERYIQVGNAVAVPVALALGYTFGLACQG 796
>gi|242037791|ref|XP_002466290.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
gi|241920144|gb|EER93288.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
Length = 196
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 131/272 (48%), Gaps = 80/272 (29%)
Query: 331 APYRSITVRDAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQD 388
AP+RSITVRD + DLP V GA+ + + P + FQ+ ++D + LL D
Sbjct: 1 APFRSITVRDTVGDLPPVENGASKPTIQYGSEPVSWFQKKIRDST----------VLLND 50
Query: 389 HICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCK 448
HI K ++ L +R + IP P DW +LP+ VKL
Sbjct: 51 HISKEMNELNLIRCKHIPKRPGCDWHELPDEKVKL------------------------- 85
Query: 449 SSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTA 508
S GQ +IPW L +TA R+N W+G+ GRL W
Sbjct: 86 ------STGQMVDLIPWCLPNTAKRHNQWKGLYGRLDW---------------------- 117
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+ +F T VT P P+ K G HPEQDR++TVRE AR+QGFPDSY
Sbjct: 118 ---------------EGNFPTSVTDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYR 162
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
F G I ++QIGNAVPPPLA A+G ++ + I
Sbjct: 163 FAGSIQCKHRQIGNAVPPPLAYALGRKLKEAI 194
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 43/281 (15%)
Query: 102 HSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ 161
H++E L K + PL+ L+LFSG GGL GL +G + W+VE S A +Y AN
Sbjct: 747 HTEELLQK-----NEPLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAMTYQANHS 801
Query: 162 ECSVIQDDCNLVLKSLLKGHTQH-----KGV-------SLPQKHEVDLIVAGPPCQGFSQ 209
+V N++L+ + H KG+ +P+ +VD I GPPCQ FS
Sbjct: 802 HTTVYNQCTNVLLQHAIDTHEGKNPKPLKGIHSGKVLPGMPKPGDVDFIYGGPPCQSFSG 861
Query: 210 LNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KN 255
+N ++ + +++ L+ LS+ + ++P Y +LENVTG++++ +
Sbjct: 862 INHWKKA--NDIRSTLICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTVDGIEM 919
Query: 256 EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ 315
+++ I L + YQ+ F+VLQ+G YG Q R RV+ +K G LP P P H F ++
Sbjct: 920 GVVKFILRSLAALGYQIRFNVLQAGQYGAPQGRQRVIFWGAKRGLLLPELPIPTHGFVSR 979
Query: 316 LFTIN-GNLVANKTSH---------APYRSITVRDAISDLP 346
+ ++ G + T +P+R++T+ DAI DLP
Sbjct: 980 NYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTINDAIGDLP 1020
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
++G+ GRL + F T +TT P K G +LHP Q R++TVRE ARAQGFPDSY F
Sbjct: 1141 FRGLYGRLDGESQFKTALTTVAPNAKGGNLLHPSQKRIVTVRECARAQGFPDSYEF 1196
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 194/439 (44%), Gaps = 77/439 (17%)
Query: 168 DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNG 224
D C +K + KG K LP EV +I GPPCQG S NR R KN
Sbjct: 336 DGCQEKIKDFVAKGF---KASILPLPGEVQVICGGPPCQGVSGFNRFRNSTNPLGDSKNK 392
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ TF+ + P+++++ENV LV F + + L+ MNYQ ++ +G YG+
Sbjct: 393 QLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGAYGL 452
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLH-----AFSNQLFTINGNLVANKTSHAPYRSITVR 339
Q R R + + P LP +P P H + F N + R + ++
Sbjct: 453 PQFRRRASMWGALPSETLPQYPLPTHNVVVRGEMPKAFEFNVVAYDEALTVELKRELFLK 512
Query: 340 DAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
DAIS LP V + + + + PK+ FQ ++ SR + L +L DH L+
Sbjct: 513 DAISALPPVEHDEPTDEMPYIDEPKSAFQHFIR--SRRNG---TLGSVLYDHRPLRLNED 567
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
R+ IP A++RDLP + V+ + T +L + ++ K + G
Sbjct: 568 DYQRVCQIPKRKGANFRDLPGVRVR-----ANNTVELDPDVERVK-----------VASG 611
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
+ ++P T R + + GRL WDE I+P
Sbjct: 612 K--PLVP-DYAITFVRGTSTKP-FGRLWWDE----------IVP---------------- 641
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
T+VT P N+ ILHPEQDRVLT+RE AR QGFPD Y G I + Y
Sbjct: 642 -----------TVVTRAEPHNQ--VILHPEQDRVLTIRENARLQGFPDYYKLTGPIKERY 688
Query: 578 KQIGNAVPPPLAKAIGYEI 596
Q+GNAV P+A+ +GY +
Sbjct: 689 MQVGNAVAVPVARVLGYSL 707
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 201/452 (44%), Gaps = 77/452 (17%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELE--KSKLKNGLV 226
+C +++ +K K + LP +VD+I GPPCQG S NR R + +N +
Sbjct: 828 NCQEAIQNFVKRGLGEKILPLP--GDVDVICGGPPCQGISGYNRFRNTDCPMDDERNRQI 885
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F+ +PKY+++ENVT ++ FN+ + + L+ MNYQ + +G +G+ Q
Sbjct: 886 VIFMDIVKFLKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQARLGTIAAGCFGLPQ 945
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLF---TINGNLVANKTSHAPY--RSITVRDA 341
R RV + ++P KLP FP P H + + N VA + +++ ++DA
Sbjct: 946 FRLRVFLWGARPSEKLPQFPLPTHEVIVRYWPPPEFERNTVAYDENQPRQLEKAVVLQDA 1005
Query: 342 ISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGS-RIHDIHINLR--ELLQDHICKILSP 396
+SDLP VS + + PP+T FQR ++ + + R + L DH +L
Sbjct: 1006 LSDLPAVSNSESWEKMPYEKPPETEFQRYIRSSKYEMTGCETDNRSTDTLYDHQPHLLGE 1065
Query: 397 LMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSK 456
+R+ IP A++RDLP + V +V ++
Sbjct: 1066 DDHLRVCNIPKRKGANFRDLPGVIV------------------GSDNVVRRDPANEVLLP 1107
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQG 516
K + +++ R+ GRL WDE+ T++ + H+
Sbjct: 1108 SGKLMVPDYAISFEQGRSKR---PFGRLWWDETVP------TVVTFPSCHS--------- 1149
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
++ P +Q ++L T+REYAR QGFPD Y F G + +
Sbjct: 1150 ------------SVALHP----EQDRVL--------TIREYARLQGFPDYYKFSGSVKER 1185
Query: 577 YKQIGNAVPPPLAKAIGYEI---IKCIGNAVP 605
Y+Q+GNAV +++A+GY + ++ +G P
Sbjct: 1186 YRQVGNAVAVSVSRALGYSLGLAVRRMGGDEP 1217
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 198/451 (43%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC ++ ++ HK LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 356 DCPQKIREFVQ--EGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQM 413
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 414 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 473
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 474 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALLLGDA 533
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRE-------LLQDHICK 392
ISDLP+V Q + + PKT FQR ++ SR + + E L DH
Sbjct: 534 ISDLPKVQNHQPNDVMEYGGSPKTEFQRYIR-LSRKDMLDWSFGEGAGPDEGKLLDHQPL 592
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E + K S
Sbjct: 593 RLNNDDYERVQQIPVKKGANFRDLKGVRV----GANNIVEWDPEIERVKLSSGKPLVPDY 648
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S + ++ P+ GRL WDE+ +P
Sbjct: 649 AMSFIKGKSLKPF----------------GRLWWDET----------VP----------- 671
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ I+HP Q RVLT+RE AR QGFPD Y G
Sbjct: 672 ----------------TVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGP 713
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 714 IKEKYIQVGNAVAVPVARALGY----CLGQA 740
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 188/426 (44%), Gaps = 78/426 (18%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP + D+I GPPCQG S NR R ++ + +N + F+ +PKY+++ENV
Sbjct: 344 LPLPGDADVICGGPPCQGISGYNRYRNVDSPLADERNIQIVVFMDIVQFLKPKYVLMENV 403
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY------ 300
++ F+K + L+ M YQ + +G YG+ Q R RV + + P
Sbjct: 404 VDILRFDKASFARYALSRLVHMKYQARLGTVAAGCYGLPQFRLRVFLWGAHPKEASFIIH 463
Query: 301 -KLPSFPQPLHAFSNQLF---TINGNLVA---NKTSHAPYRSITVRDAISDLPRVS--QG 351
KLP FP P H + + N VA ++ ++ +RDAISDLP V+ +
Sbjct: 464 GKLPQFPLPSHDVIVRYWPPPEFERNTVAYDEDQPRDDLEKATVLRDAISDLPDVTSHET 523
Query: 352 ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA 411
+ PP+T FQ+ ++ + + LL DH L+ R+ IP A
Sbjct: 524 REEMAYDKPPETDFQQFIRSTRNGNLSGTRMINLLYDHRPYSLTEEDFARVCQIPKKKGA 583
Query: 412 DWRDLPNICVKLPR-GQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHT 470
++RDLP + V + TE+ K V D + +G K+ P++
Sbjct: 584 NFRDLPGVVVGADNVARRDPTEEQMLLPSGKPLVPDF----ALNFEGGKSR-RPYA---- 634
Query: 471 ASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTI 530
RL WDE+ +T++ + +H+ Q V+
Sbjct: 635 ------------RLWWDETV------STVVTFPDLHS-------QAVM------------ 657
Query: 531 VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAK 590
HPEQDRVLT+RE AR QGFPD Y F G + Y+QIGNAV P+ +
Sbjct: 658 --------------HPEQDRVLTIRECARLQGFPDYYRFCGTVKQRYRQIGNAVAVPVGR 703
Query: 591 AIGYEI 596
A+G+ +
Sbjct: 704 ALGFTL 709
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 154/569 (27%), Positives = 228/569 (40%), Gaps = 163/569 (28%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAG-VAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL LDLF G G +GL + + +VE+ S A + + N V N +L+
Sbjct: 746 PLPTLDLFGGVGAFSKGLAEGSECLRVTHAVEIGPSAAKTLERNSPGTIVYNQCANTMLR 805
Query: 176 SLLK---GHTQHKGVSL----------PQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
+K GH V L P+ E+ + G PCQ S LNR +++ +K
Sbjct: 806 YAIKSCEGHKPDPPVQLFDGKTPVPAPPKPGEIKVFTIGFPCQTHSTLNRFQDVRD--IK 863
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHF----NKNEILQCI--------FHCLLKMNY 270
+ L+ LS+ D ++P ENV G + F +N ++ I LL M Y
Sbjct: 864 SNLILNALSWIDFYRPMLCYFENVAGFLQFRVFHTENSDVEGIEMGGLKLLKRGLLDMGY 923
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH 330
QV +LQ+ +YG Q R R ++A+ G LP+ PQP H F + F + V KT+
Sbjct: 924 QVREGLLQAAHYGTPQRRERFFLIAALDGTPLPALPQPTHDFPKEFFKNTNSDVTYKTTP 983
Query: 331 A--------------PYRS---------ITVRDAISDLPRVS----------------QG 351
+ P RS +T+ DAI DLPR G
Sbjct: 984 STSLSIVYPNKKRIQPIRSANGTALHPCVTIGDAIDDLPRFDWTHRDEQRSRRGREGVPG 1043
Query: 352 ANC--------------YL----FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKI 393
C Y+ +H+PPKT +QR +R+ + NL+ H +I
Sbjct: 1044 FPCDTEALARRGVKQCGYVGRPPYHHPPKTVYQRQ----ARMKPVR-NLQ-----HFTRI 1093
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSC 453
L R I PNAD++ + T++ +
Sbjct: 1094 LKADTVKRCINIRLEPNADYKSTLLFAFTM-----VITDEWR------------------ 1130
Query: 454 TSKGQKNTIIPWSLVHTAS---RNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
K + ++ W+ + +S R G GRL DM N + P
Sbjct: 1131 --KALRADLLEWNTANPSSAMVRKGFKSGAYGRL------DM----NAVFP--------- 1169
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF- 569
T VT P KQ + LHP+ R+LT+RE+AR+QGFPDS+ F
Sbjct: 1170 ------------------TTVTNAGPTAKQSRCLHPDSHRMLTIREFARSQGFPDSFEFV 1211
Query: 570 --RGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ + + +QIGNAVP PLA A+G E+
Sbjct: 1212 SLKDKVITIQRQIGNAVPLPLANALGREL 1240
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 36 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 95
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 96 MAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 155
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF 274
+P++ +LENV V + ++ +L+ CL++M YQ TF
Sbjct: 156 RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 193
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 198/488 (40%), Gaps = 132/488 (27%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ +DLFSG GGL G AG C ++++ A+Y N+ + Q+D V S L
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGFESIC-AIDVNAKALATYQHNYPKTRTFQEDIRKVNPSEL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + G+ Q+ E+ ++ GPPCQGFS+ A + +N L +FL F F+P
Sbjct: 63 R---LYLGL---QREELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRP 116
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++++ENV ++ I I L YQV L + YGV Q+R+R LAS
Sbjct: 117 LHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLASLE 176
Query: 299 GYKLPSFPQPLHAFS-----------NQLFTINGNLVANKTSHAPYRSITVRDAISDLP- 346
+LPS PQ H+ QL + N+ AP TV+DAISDLP
Sbjct: 177 --RLPSLPQATHSGDIRSDYKAVKSWTQLTVLEPNI-------APV--TTVKDAISDLPT 225
Query: 347 -RVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
Q + ++ P+T +Q+ M++ S + + +HI + L+P+ R++++
Sbjct: 226 LEAGQAYDHEIYTREPETIYQQKMREQS----------QKIVNHIARALTPIQMSRVQIL 275
Query: 406 PSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPW 465
D RDLP A KK
Sbjct: 276 AE--GQDARDLPAEL-----------------APKK------------------------ 292
Query: 466 SLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
++ G GRL+WD+ TI W H S GR
Sbjct: 293 ----------HYSGAYGRLSWDKP------ARTITRW-FFHPGS---------GRF---- 322
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
HP Q+R +T+RE AR +PD + F G DM QIG +VP
Sbjct: 323 ------------------FHPTQNRTITIREAARLHSYPDHFHFLGTYTDMASQIGESVP 364
Query: 586 PPLAKAIG 593
P L K +
Sbjct: 365 PLLGKVVA 372
>gi|409052037|gb|EKM61513.1| hypothetical protein PHACADRAFT_204683 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1320
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 227/535 (42%), Gaps = 111/535 (20%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P + D F G G + +AG K +VEL S A + N + +V NLVL+
Sbjct: 816 PFRAFDPFGGVGAFALAMQEAGCLKLTHAVELSPSAALTLKRNSPDTTVYNQCANLVLEH 875
Query: 177 LLKGHTQHKGVSLPQKH--------------------EVDLIVAGPPCQGFSQLNRAREL 216
+K + G LP ++ ++D IVAG P + L
Sbjct: 876 AVKT-VRLPGYQLPPEYKPILKSDPTLSPLPPPPKPGDIDCIVAGFPWH----VKLVMLL 930
Query: 217 EKSK-LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI---------------LQC 260
K+ K+ L+ LS+ D +PK ENV G + +N N I L+
Sbjct: 931 PKANDRKSHLILNLLSWVDFLEPKLCFFENVCGFLQYNLNSIQASRYKLEGGIQMGGLKF 990
Query: 261 IFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ---LF 317
+ L+ M YQV F VLQ+ +YG Q+R R ++A++ G +P+FP PL++F+ +
Sbjct: 991 LVRALVTMGYQVKFAVLQAAHYGTPQTRVRFFLIAAQLGQPMPNFPAPLYSFTPKDALEI 1050
Query: 318 TINGNLVA----NKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGS 373
+ L+A + AP+R +TV DAI DL R + + NP K + G+
Sbjct: 1051 KFSHGLIARPINTENGIAPFRYVTVDDAIGDLLR-------WDWVNPRKGAERERRDPGT 1103
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK 433
R +R + + K + PL ++ + +
Sbjct: 1104 REA-----IRAVKVEQTKKAVGPLAAGTVK------------------------YHGPAR 1134
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
++ K + + K T + +T+ +L+ ++ + + +L
Sbjct: 1135 TRFQEKARVKQSEIKDLQHITRVLKLDTVARVTLIPLEAKAD-YHALL------------ 1181
Query: 494 GQKNTIIPWSLVH--------TASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
K+ IP L+ +R+ G+ GR+ +E F T VT P KQ K+L+
Sbjct: 1182 --KDKDIPRDLLEWHWADPKSAIARHGFRPGLYGRMDPNEWFQTTVTNVEPTAKQCKVLN 1239
Query: 546 PEQDRVLTVREYARAQGFPDSYVF----RGGICDMYKQIGNAVPPPLAKAIGYEI 596
P RV++VRE AR+QGFPD + F + M ++IGNAVP P+ A+G E+
Sbjct: 1240 PFCKRVVSVRELARSQGFPDHFQFYCYDTVNVKTMQREIGNAVPWPVGYALGREL 1294
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 177/408 (43%), Gaps = 99/408 (24%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+CL+LF+G GGL GL Q+G + W+VE S A S+ AN C+V N++L+
Sbjct: 730 PLRCLELFAGAGGLASGLHQSGFVETKWAVESSPSAALSFAANNPRCTVYTQCSNVLLRH 789
Query: 177 LLK------------GHTQHKGVS----LPQKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
++ HK +P+ EVD I GPPCQ FS NR ++ +
Sbjct: 790 AIETQQAPRSRPRQVASLNHKDKDALPPMPKPGEVDFICGGPPCQSFSGANRWKKAD--D 847
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHF----NKNE---------ILQCIFHCLLK 267
+++ L+ +S+ D ++PKY +LENVTGL+ K + +++ IF L+
Sbjct: 848 IRSTLICNTISYVDFYRPKYFLLENVTGLLSVPLGTEKQDQMTDGVAMGVVKFIFRALVS 907
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLV 324
+ YQV VLQ+ YG QSR RV+ A++ LP FP P H F+ + + N G ++
Sbjct: 908 LGYQVHCKVLQAAQYGTPQSRERVIFWAARRDVPLPDFPYPTHHFAKGVRSFNLPTGEVL 967
Query: 325 ANKTSHAPYRS--------------ITVRDAISDLP----------------RVSQG--- 351
AP+ S ITV DAI DL R++QG
Sbjct: 968 HRPVRVAPHESAKRSEYAQYAPLCAITVEDAIGDLQKFDWLPSGPLTDEDIHRLAQGIVR 1027
Query: 352 -----------------ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKIL 394
F +PP +Q ++G + D + H +
Sbjct: 1028 FEAVTNREARFPYAGYCGKGTAFLHPPLNRYQMQAREGLDVDDNVVY-------HYTQKF 1080
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKK 442
S + R+ +P A+ +DLP Q+ KL+ N K KK
Sbjct: 1081 SAKIVDRVLHVPLRAGANHQDLPP--------QYRDKRKLQPNGKSKK 1120
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG-------G 572
R+ D F T++TT P +LHP Q RVLT+RE ARAQGFPDS+ F
Sbjct: 1128 RIDRDSHFMTMLTTVKPSGTNAIVLHPTQKRVLTIRECARAQGFPDSHKFLSVHSIPAKV 1187
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ D +QIGNAVP PLA+A+G E+ K +
Sbjct: 1188 VEDQLRQIGNAVPVPLARALGKELGKVL 1215
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 198/488 (40%), Gaps = 132/488 (27%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ +DLFSG GGL G AG C ++++ A+Y N+ + Q+D V S L
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGFESIC-AIDVNAKALATYQHNYPKTRTFQEDIRKVNPSEL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + G+ Q+ E+ ++ GPPCQGFS+ A + +N L +FL F F+P
Sbjct: 63 R---LYLGL---QREELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRP 116
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++++ENV ++ I I L YQV L + YGV Q+R+R LAS
Sbjct: 117 LHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLASLD 176
Query: 299 GYKLPSFPQPLHAFS-----------NQLFTINGNLVANKTSHAPYRSITVRDAISDLP- 346
+LPS PQ H+ QL + N+ AP TV+DAISDLP
Sbjct: 177 --RLPSLPQATHSGDIRSDYKAVKSWTQLTLLEPNI-------APV--TTVKDAISDLPT 225
Query: 347 -RVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
Q + ++ P+T +Q+ M++ S + + +HI + L+P+ R++++
Sbjct: 226 LEAGQAYDHEIYTREPETIYQQKMREQS----------QKIVNHIARALTPIQMSRVQIL 275
Query: 406 PSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPW 465
D RDLP A KK
Sbjct: 276 AE--GQDARDLPAEL-----------------APKK------------------------ 292
Query: 466 SLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
++ G GRL+WD+ TI W H S GR
Sbjct: 293 ----------HYSGAYGRLSWDKP------ARTITRW-FFHPGS---------GRF---- 322
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
HP Q+R +T+RE AR +PD + F G DM QIG +VP
Sbjct: 323 ------------------FHPTQNRTITIREAARLHSYPDHFHFLGTYTDMASQIGESVP 364
Query: 586 PPLAKAIG 593
P L K +
Sbjct: 365 PLLGKVVA 372
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 197/454 (43%), Gaps = 109/454 (24%)
Query: 195 VDLIV----AGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLV 250
+D IV GPPCQ FS +N + + ++N LV LS+ + +QP Y +LENVTGL+
Sbjct: 267 IDAIVICSFTGPPCQSFSGMNHYKRADD--IRNTLVCNMLSYVEFYQPLYFLLENVTGLL 324
Query: 251 HFNKNE--------------ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+ N +++ I L+ + YQV F VLQ+G YG Q R RV+ +
Sbjct: 325 FYPLNGRQEGRAIVGGVKMGVVKFILRTLVSLGYQVRFKVLQAGQYGSPQDRKRVIFWGA 384
Query: 297 KPGYKLPSFPQPLHAFSN--QLFTI-NGNLV--ANKTSH------------APYRSITVR 339
K G LP FP P H+F Q F + G+++ ++ H AP +TV
Sbjct: 385 KQGLPLPEFPLPTHSFPRGVQAFKLPTGDILRPVTRSDHSATTSKSMRLDFAPLLPVTVN 444
Query: 340 DAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+A+SDLP + + NP F + ++ I L ++ + SP
Sbjct: 445 EALSDLP-------PFDWINP----FVSLRPTSQQLDSIQTRLAAGIR-RFDALTSPHST 492
Query: 400 MRIRLIPSFPNAD-WRDLP-NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
P F +A + LP N + R S K +Y + SV + + +
Sbjct: 493 Y-----PGFNDATPYLTLPMNSYQEWIRQGSSSLVKHQYTRRFAASVVERVLNVPFGPEA 547
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
L H + WQGV GR+ DE+ G
Sbjct: 548 DHT-----DLPHQLRISRMWQGVCGRI--DEN--------------------------GF 574
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG------ 571
G T +TT P + GK+LHP Q R++TVRE ARAQGFPD Y F
Sbjct: 575 FG---------TALTTVMPTGQCGKLLHPNQKRIVTVRECARAQGFPDWYEFHSINMKAP 625
Query: 572 -GICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
+ D ++QIGNAVP PLA A+G K +G A+
Sbjct: 626 DVVADQHRQIGNAVPVPLALALG----KALGKAL 655
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 187/419 (44%), Gaps = 76/419 (18%)
Query: 194 EVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVH 251
+VD+I GPPCQG S NR R ++ KN + TF+ +PKY+++ENV ++
Sbjct: 2 DVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILK 61
Query: 252 FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA 311
F + + L+ M YQ ++ +G YG+ Q R RV + + P LP +P P H
Sbjct: 62 FADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHN 121
Query: 312 FSNQLFTING---NLVANKTSHAPY--RSITVRDAISDLPRVS--QGANCYLFHNPPKTH 364
+ N ++VA + P ++ + DAISDLP V+ Q + + PKT
Sbjct: 122 VVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTE 181
Query: 365 FQRMMK-------DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
FQR ++ D S +L +LL DH L+ R++ IP A++RDL
Sbjct: 182 FQRYIRLSRKEMLDSSFEGKDGPDLGKLL-DHQPLKLNKDDHERVQQIPVKKGANFRDLK 240
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNW 477
+ V G ++ E D S G K + +++ R+
Sbjct: 241 GVRV----GANNIVE------------WDPDVPRVYLSSG-KPLVPDYAMSFIKGRSLK- 282
Query: 478 QGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPL 537
GRL WDE+ +P T+VT P
Sbjct: 283 --PFGRLWWDET----------VP---------------------------TVVTRAEPH 303
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
N+ ILHP Q RVLTVRE AR QGFPD Y G I + Y Q+GNAV P+A+A+GY +
Sbjct: 304 NQ--IILHPNQARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYSL 360
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 45/283 (15%)
Query: 102 HSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ 161
H++E L K + PL+ L+LFSG GGL GL +G + W+VE S A +Y AN
Sbjct: 799 HTEELLQK-----NEPLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAMTYQANHS 853
Query: 162 ECSVIQDDCNLVLKSLLKGHTQH-----KGV-------SLPQKHEVDLIVAGPPCQGFSQ 209
+V N++L+ + H KG+ +P+ +VD I GPPCQ FS
Sbjct: 854 HTTVYNQCTNVLLQHAIDTHEGKNPKPLKGIHSGKVLPGMPKPGDVDFIYGGPPCQSFSG 913
Query: 210 LNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KN 255
+N + + + +++ L+ LS+ + ++P Y +LENVTG++++ +
Sbjct: 914 INHWK--KANDIRSTLICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTVDGIEM 971
Query: 256 EILQCIFHCLLKMNYQVTFDV--LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS 313
+++ I L + YQ+ F+V LQ+G YG Q R RV+ +K G LP P P H F
Sbjct: 972 GVVKFILRSLAALGYQIRFNVLQLQAGQYGAPQGRQRVIFWGAKRGLLLPELPIPTHGFV 1031
Query: 314 NQLFTIN-GNLVANKTSH---------APYRSITVRDAISDLP 346
++ + ++ G + T +P+R++T+ DAI DLP
Sbjct: 1032 SRNYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTINDAIGDLP 1074
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 184/414 (44%), Gaps = 74/414 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFTIN--GNLVANKTSHAPYR---SITVRDAISDLPRVSQG-ANCYLFHN- 359
P H + + T +L + + ++T+ DAISDLP V+ AN + +N
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYND 581
Query: 360 -PPKTHFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
PKT F+ + + + + + L DH +L R+ IP A++RD
Sbjct: 582 AAPKTEFENFISLKRSETLLPACGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRD 641
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+P + V + K + N + + + K KN + +++ ++
Sbjct: 642 MPGVLV--------HNNKAEINPRFRAKL-----------KSGKNVVPAYAISFIKGKS- 681
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GRL W DE +T+VT
Sbjct: 682 --KKPFGRL-----------------WG--------------------DEIVNTVVTRAE 702
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+
Sbjct: 703 PHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVG 754
>gi|395512633|ref|XP_003760540.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 137
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPWSL HT +RNN+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 18 QFNTLIPWSLPHTGNRNNHWAGLYGRLEWDGFFSTTVTDPEPMGKQGRVLHPEQHRVVSV 77
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y F G D ++Q+GNAVPPPLAKAIG EI I
Sbjct: 78 RECARSQGFPDTYRFFGQTLDKHRQVGNAVPPPLAKAIGLEIKNSI 123
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 191/439 (43%), Gaps = 92/439 (20%)
Query: 169 DCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE----LEKSKLKN 223
DC +K + KGH ++ LP VD+I GPPCQG S NR R+ LE K K
Sbjct: 321 DCPERIKEFVEKGHKEN---ILPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQ 377
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
+VF + +PKY+++ENV ++ F + + CL+ MNYQ ++ +G YG
Sbjct: 378 LVVF--MDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYYG 435
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLH----------AFSNQLFTINGNLVANKTSHAPY 333
+ Q R R + + P LP FP P H FS + N +
Sbjct: 436 LPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPTTFSQSVVAYN-----EVDTRCLR 490
Query: 334 RSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSR-IHDIHINLRE-----L 385
+++ + DAISDLP+V Q + + PKT FQR +++ + I D +
Sbjct: 491 KALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGK 550
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DH L+ R++ IP A++RDL + V T +L N +++
Sbjct: 551 LFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-----PDNTVRLDPNISRER--- 602
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
S G K + +++ ++ GRL WDE+ +P
Sbjct: 603 --------LSSG-KPLVPDYAISFVKGKSTK---PFGRLWWDET----------VP---- 636
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
T+VT P N+ ILHP QDRVLT+RE AR QGFPD
Sbjct: 637 -----------------------TVVTRAEPHNQI--ILHPSQDRVLTIRENARLQGFPD 671
Query: 566 SYVFRGGICDMYKQIGNAV 584
Y G + + Y Q+GNAV
Sbjct: 672 YYRLIGPLKEKYIQVGNAV 690
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 184/414 (44%), Gaps = 74/414 (17%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGIVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFTIN--GNLVANKTSHAPYR---SITVRDAISDLPRVSQG-ANCYLFHN- 359
P H + + T +L + + ++T+ DAISDLP V+ AN + +N
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYND 581
Query: 360 -PPKTHFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
PKT F+ + + + + + L DH +L R+ IP A++RD
Sbjct: 582 AAPKTEFENFISLKRSETLLPACGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRD 641
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+P + V + K + N + + + K KN + +++ ++
Sbjct: 642 MPGVLV--------HNNKAEINPRFRAKL-----------KSGKNVVPAYAISFIKGKS- 681
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GRL W DE +T+VT
Sbjct: 682 --KKPFGRL-----------------WG--------------------DEIVNTVVTRAE 702
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+
Sbjct: 703 PHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVG 754
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 193/425 (45%), Gaps = 78/425 (18%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK---NGLVFTFLSFCDLFQPKYIILEN 245
LP VD++ GPPCQG S NR R EK LK N + ++ + +PKY+++EN
Sbjct: 416 LPLPGGVDVVCGGPPCQGISGYNRFRN-EKEPLKDKKNEQLLEYMKIVEFLKPKYVLMEN 474
Query: 246 VTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSF 305
V ++ F + + L++MNYQ ++ +G+YG+AQ R R + + LP F
Sbjct: 475 VVDMLRFVDGFLARYAVGRLVQMNYQTRMGMMAAGSYGLAQFRRRFFLWGAMSSETLPQF 534
Query: 306 PQPLHAFSNQ---LFTINGNLVANKTSHAPYRS--ITVRDAISDLPRVSQGANC--YLFH 358
P P H N+ + N+VA + + + I + D ++DLP V+ +
Sbjct: 535 PLPTHDAVNRGHVPVNFHSNVVAYEETDNVKLADKILLSDVLTDLPVVANNERRAEMPYD 594
Query: 359 NPPKTHFQ---RMMKDG--SRIHDIHINLR-ELLQDHICKILSPLMEMRIRLIPSFPNAD 412
PKT FQ R+ ++G + D N + E+L DH L+ R+ IP A+
Sbjct: 595 KDPKTPFQKFIRLTQEGMLASPKDPKSNSKNEVLYDHHPLNLNKDDYQRVCRIPKKKQAN 654
Query: 413 WRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP-WSLVHTA 471
+RDLP + V + K++++ K + + + +IP +++
Sbjct: 655 FRDLPGVTV-------NANNKVEWDPKIPRIYLES-----------NHPLIPEYAMKFVE 696
Query: 472 SRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV 531
++ + GRL WDE+ +P T++
Sbjct: 697 GKS---KKPFGRLWWDET----------VP---------------------------TVI 716
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
P N I+HP QDRVLTVRE AR QGFPD Y G Y Q+GNAV P+A+A
Sbjct: 717 GRAEPHNHV--IIHPNQDRVLTVRENARLQGFPDYYRLFGPTKKKYTQVGNAVAVPVARA 774
Query: 592 IGYEI 596
+GY +
Sbjct: 775 LGYAL 779
>gi|242212987|ref|XP_002472324.1| predicted protein [Postia placenta Mad-698-R]
gi|220728601|gb|EED82492.1| predicted protein [Postia placenta Mad-698-R]
Length = 1147
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 248/635 (39%), Gaps = 164/635 (25%)
Query: 19 KIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEYY-- 76
++ DN L+ T E+I+ I+ V F+ + +E L + D+ YT+ Y
Sbjct: 604 RVVSDNRRLYRTREYETINADRIQGKAYVAFIESRDRRDEWL-----QHDDHFYTDLYTN 658
Query: 77 ----RKTKDKHFVQ---PNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCGG 129
+ D H + P I ++ E L + PL+ L+LF+G
Sbjct: 659 NSIAQSLDDLHTLTKSIPQCLVCRQQRIDQLESEVEVLDR-----KGPLRGLELFAG--- 710
Query: 130 LMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT------- 182
L +G + W+VE A ++ N V D N++LK L H
Sbjct: 711 ----LELSGFVQTKWAVEFSPGAALTFQENHTNAIVYNQDSNVLLKHALAAHEGNNPEPL 766
Query: 183 -------QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+H+ +P + EVD I G Q+ RA
Sbjct: 767 LSLREDERHELPPMPTQGEVDFIYGG------RQVGRA---------------------- 798
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+V K +++ I L+ + YQV F V+ +G+YG AQSR RV+
Sbjct: 799 -------------IVGGIKMGVVKFIIRALVCLGYQVHFKVVDAGHYGAAQSRRRVIFWG 845
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTI----NGNLV-----------ANKTSH--APYRSITV 338
+K G LP FP+P+H + + F G ++ + +++H P +TV
Sbjct: 846 AKQGVPLPKFPKPMHDLTKRSFHSFKLPTGEVLKPVTWSIRHKESGQSNHQCVPLLPVTV 905
Query: 339 RDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLM 398
DAI+DLP + + NP F + + +I + L + ++
Sbjct: 906 NDAIADLP-------SFDWVNP----FNEIRPGPKDLDEIGLRLAKGIR----------- 943
Query: 399 EMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY-NAKKKKSVCDCKSSSSCTSKG 457
R +PS P + +T+ + Y + + + +
Sbjct: 944 --RFDAVPSLE-------PRLA--------GFTDPVPYAHPPMSRYQLWIRQGAGAEVTH 986
Query: 458 QKNTIIPWSLVHTASR-----NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
+ P +V R N N +G+ +L F+ +G
Sbjct: 987 HYTRLFPARIVERVVRVPLTPNANHEGLPAKLRVGRLFESSGDAR--------------K 1032
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG- 571
+ V GR+ D+ F T +TT P +K G++LHP Q R+LTVRE ARAQGFPD Y F
Sbjct: 1033 RYDRVYGRIDGDQIFQTALTTVAPNSKVGRVLHPNQKRILTVRECARAQGFPDKYEFHSV 1092
Query: 572 ------GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ D ++QIGNAVP PL A+G E+ K +
Sbjct: 1093 NTKLSDRVADQHRQIGNAVPVPLGLALGKELGKAL 1127
>gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta]
Length = 298
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 91/135 (67%)
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ G LPQK EV+LI GPPCQGFS +NR + S KN LV +FLS+CD ++PK+
Sbjct: 130 QVDNNGQKLPQKGEVELICGGPPCQGFSGMNRFNSRQYSLFKNSLVVSFLSYCDYYKPKF 189
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I+ENV K +L+ CL++M YQ TF +LQ+G+YGV Q+R R++++A+ PG
Sbjct: 190 FIMENVRNFTSCKKGMVLKLTLRCLVRMGYQCTFGILQAGSYGVPQTRKRMILIAAAPGE 249
Query: 301 KLPSFPQPLHAFSNQ 315
LP++P+P+H F+ Q
Sbjct: 250 ILPNYPEPMHVFNKQ 264
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 136 QAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
QAGVA+ W++E E + A +Y N + +V +DCN++L+ ++
Sbjct: 3 QAGVAESLWAIEKEEAAANAYRLNNSKATVFTEDCNILLQKVM 45
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 159/362 (43%), Gaps = 78/362 (21%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ +D+F+GCGGL GL + G + + +E + + + NF V ++ N +L+
Sbjct: 723 LRAMDVFAGCGGLSSGLHEGGAVETLYGIEWDIDASRTLKRNFPHMKVYNENANTLLQRA 782
Query: 178 LKGHTQHKGVS--------------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
++ + +G + +P++ ++D + GPPCQ FS NR + + +KN
Sbjct: 783 IQ---EERGTATGVMKDLQGKPMPPMPKRGDIDFLYGGPPCQDFSGCNRC--PKANSIKN 837
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFN----------------KNEILQCIFHCLLK 267
L+ TFLSF D ++PKY +LENV GL+ + ++ I L
Sbjct: 838 SLLTTFLSFVDHYRPKYFLLENVRGLLQHRLGSTQKKSGPGVQGGIQQGSVKFILRALTS 897
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANK 327
+ Y F +LQ+ +G QSR RV + G KLP +PQP H N +
Sbjct: 898 LGYSAQFHMLQAAEHGAPQSRRRVFFWGALLGRKLPLYPQPTHVCKGLSAPTNTFTMG-- 955
Query: 328 TSHAPYRSITVRDAISDLP--------------------------------RVSQGANCY 355
S AP+ +TV DAISDLP + G NC
Sbjct: 956 -STAPHNPVTVGDAISDLPAFDWRIKVPGEDRQARRQRELGIPTVDVPLGGKAPVGDNCS 1014
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
L+ P T FQR ++ + + ++++H+ + +R+ IP P A+ D
Sbjct: 1015 LYAYGPITEFQREVRRYVKGN--------IVKNHVTRQWGSQTMLRLARIPMRPQANHND 1066
Query: 416 LP 417
LP
Sbjct: 1067 LP 1068
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
AS++N + RL + E F T +T +P + GKILHP Q R+LTVRE+ARAQGF D++
Sbjct: 1081 ASKSNFYPNRYHRLDFKEQFQTCLTNVDPGGENGKILHPTQRRILTVREFARAQGFLDTF 1140
Query: 568 VFRGGI---CDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ MYKQIGNAV +A+G E+ +
Sbjct: 1141 TWDPNAQSPSAMYKQIGNAVSLQHGRALGKELFNAL 1176
>gi|386746056|ref|YP_006219273.1| site-specific DNA methylase [Helicobacter pylori HUP-B14]
gi|384552305|gb|AFI07253.1| site-specific DNA methylase [Helicobacter pylori HUP-B14]
Length = 405
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 201/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N +I D
Sbjct: 7 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGS-HIIYGDI-------- 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 57 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 110 KFFVAENVKGLLSIQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L V
Sbjct: 170 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANV---------- 207
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH +H+ R + +F W
Sbjct: 208 ---RTRDASFMLDGVMIH-----------NHVA---------RTNVYDTF----WGR--- 237
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC+S K + HTA ++
Sbjct: 238 ---KYPINQHEICDYLKF-------------WRSCSSYSTKQIDEYFGYAHTAGHWFRKD 281
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 282 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFEQSLRINN----------WEL 331
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 332 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 384
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 385 VLLAQKIAKEIFK 397
>gi|420499916|ref|ZP_14998468.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp P-26]
gi|393149150|gb|EJC49462.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp P-26]
Length = 412
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 201/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N +I D
Sbjct: 11 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGS-HIIYGDI-------- 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 61 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 114 KFFVAENVKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L V
Sbjct: 174 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANV---------- 211
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH +H+ R + +F W
Sbjct: 212 ---RTRDASFMLDGVMIH-----------NHVA---------RTNVYDTF----WGR--- 241
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC+S K + HTA ++
Sbjct: 242 ---KHPINQHEICDYLKF-------------WRSCSSYSTKQIDEYFGYAHTAGHWFRKD 285
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 286 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFEQSLRINN----------WEL 335
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 336 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 388
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 389 VLLAQKIAKEIFK 401
>gi|420462193|ref|ZP_14960978.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp H-3]
gi|393079057|gb|EJB79791.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp H-3]
Length = 409
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 200/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N +I D
Sbjct: 11 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGS-HIIYGDI-------- 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 61 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 114 KFFVAENVKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L V
Sbjct: 174 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANV---------- 211
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH+ + + ++C W
Sbjct: 212 ---RTRDASFMLDGVMIHN------HVARTNVCDTF------------------WGR--- 241
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC+S K + HTA ++
Sbjct: 242 ---KHPINQHEICDYLKF-------------WRSCSSYSTKQIDEYFGYAHTAGHWFRKD 285
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 286 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFEQSLRINN----------WEL 335
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 336 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 388
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 389 VLLAQKIAKEIFK 401
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1217
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 210/520 (40%), Gaps = 113/520 (21%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN----FQECSVIQDDCNL 172
P + ++LF+G GG GL + ++E++ S + +Y N F C D L
Sbjct: 750 PCRGMELFAGAGGFSTGLNKLPSIHIQHAIEMDASCSLTYKKNHPDTFFHCHSSND---L 806
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+ K++ +T +PQ ++D+IVAG PCQ +S +N ++ + + N LV LS+
Sbjct: 807 LQKAIAGTNTLELDHPMPQPGDIDIIVAGLPCQSYSGMNHNKDPDDPR--NELVANMLSY 864
Query: 233 CDLFQPKYIILENVTGLVHF--------------NKNEILQCIFHCLLKMNYQVTFDVLQ 278
D ++P ++ENV G++HF ++ IF L + YQV +L
Sbjct: 865 VDWYRPPIFVMENVFGILHFPLGGKKKGYRIVDGKPQGVIMLIFRVLTALGYQVHIALLH 924
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITV 338
+ +YG Q R RV+I+AS LP P P +F
Sbjct: 925 APHYGSPQDRRRVIIMAS-----LPGVPLPKFPVPTHVF--------------------- 958
Query: 339 RDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLM 398
+PR + + CY +++ +R H+ QDH +PL
Sbjct: 959 ------VPRAHKFSLCY----------NQVLHTVTRAHES--------QDHYYG--APLR 992
Query: 399 EMRI-RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
+R+ I P W D PR K ++ V + S TS
Sbjct: 993 SVRLGEAISDLPRFHWAD--------PRASK------KSRQREDDGVPALDAIPSKTSSP 1038
Query: 458 QKNTIIPWSLVHTASRNNNWQ-------GVLGRLAWDESFDMTGQKNTI-IPWSLVHTAS 509
IP + N +Q G L R + F + + ++ IP
Sbjct: 1039 YVGFQIPTK--YAKEPQNRYQREMREGSGDLVRYQYTPRFGVNVVERSVNIPMRPNVNHH 1096
Query: 510 RNNNW------QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGF 563
W GRL + + T +TT P + ++LHP Q R+LTVRE AR QGF
Sbjct: 1097 DLPKWLQFESKHTTYGRLDASQYYATAMTTFTPNSSGSRLLHPNQRRILTVREVARGQGF 1156
Query: 564 PDSYVF-------RGGICDMYKQIGNAVPPPLAKAIGYEI 596
PD Y I D KQ+GNAVP PLA+AIG I
Sbjct: 1157 PDDYELLSVETTPNKVIKDQLKQLGNAVPMPLARAIGGSI 1196
>gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180]
gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180]
Length = 405
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 201/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N +I D
Sbjct: 7 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGS-HIIYGDI-------- 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 57 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 110 KFFVAENVKGLLSIQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L V
Sbjct: 170 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANV---------- 207
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH +H+ R + +F W
Sbjct: 208 ---RTRDASFMLDGVMIH-----------NHVA---------RTNVYDTF----WGR--- 237
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC+S K + HTA ++
Sbjct: 238 ---KHPINQHEICDYLKF-------------WRSCSSYSTKQIDEYFGYAHTAGHWFRKD 281
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 282 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFDQSLRINN----------WEL 331
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 332 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 384
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 385 VLLAQKIAKEIFK 397
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 141/299 (47%), Gaps = 42/299 (14%)
Query: 99 KIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDA 158
K++ K FL P PLK D F G G GL ++G K ++E+ S A +
Sbjct: 668 KVLSMKNFLQSNP-----PLKAFDPFGGVGAFGLGLEESGCLKVVQTIEISPSAAQALQE 722
Query: 159 NFQECSVIQDDCNLVLKSLLKGHTQHKGV-------------SLPQKHEVDLIVAGPPCQ 205
N V N+VL+ +K H HK P ++D I+AG PCQ
Sbjct: 723 NCPHTMVYNQCSNVVLQYAIKNHAGHKPQVPRAIGNGQRALPDPPTPGQIDCIIAGFPCQ 782
Query: 206 GFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI-------- 257
SQLN + + K + L+ LS+ + QP++ + ENV G + +N N
Sbjct: 783 PHSQLNMFQRADDRK--SHLILNLLSWVNFLQPRFCLFENVRGFLSYNLNATQAGRYRVE 840
Query: 258 -------LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLH 310
L+ + H LL MNYQV F +LQ+ +YG QSR R ++A++ G+ LP+FPQP H
Sbjct: 841 GGIKMGGLKFLVHSLLAMNYQVRFALLQAAHYGTPQSRIRFFLIAARSGHPLPAFPQPTH 900
Query: 311 AF----SNQLFTINGNL---VANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPK 362
F S +L N + + + P+ ++V DAISDLPR LF N P+
Sbjct: 901 DFPLKDSLKLEFTNKGIARPIWTQNGTVPHNYVSVDDAISDLPRFHWSNPRKLFKNHPQ 959
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 502 WSLVHTAS---RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYA 558
W + AS R+ G+ GR+ F T VT P KQ +L+P R++TVRE A
Sbjct: 1042 WLFANPASATARDGFHSGLYGRIDASRWFQTTVTKVEPTAKQSWVLNPYCKRMVTVRELA 1101
Query: 559 RAQGFPDS---YVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
R+QGFPD Y + + M++QIGNAVP P++ A+G E+
Sbjct: 1102 RSQGFPDHFRFYSYNDDVKTMHRQIGNAVPFPVSSALGREL 1142
>gi|425790915|ref|YP_007018832.1| site-specific DNA methylase [Helicobacter pylori Aklavik86]
gi|425629230|gb|AFX89770.1| site-specific DNA methylase [Helicobacter pylori Aklavik86]
Length = 405
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 200/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N V D
Sbjct: 7 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGSHIVYGD---------- 55
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 56 --ITKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 110 KFFVAENVKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L +
Sbjct: 170 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANI---------- 207
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH +H+ R + +F W
Sbjct: 208 ---RTRDASFMLDGVMIH-----------NHVA---------RTNVYDTF----WGR--- 237
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC++ K + HTA ++
Sbjct: 238 ---KHPINQHEICDYLKF-------------WRSCSTYSTKQIDEYFGYAHTAGHWFRKD 281
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 282 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFEQSLRINN----------WEL 331
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 332 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 384
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 385 VLLAQKIAKEIFK 397
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 174/390 (44%), Gaps = 96/390 (24%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN------FQECS- 164
M L PL+ L+LF+G GGL GL +G+ + W+VE S A +Y AN + +CS
Sbjct: 587 MKLYGPLRGLELFAGAGGLSTGLDMSGMVQTRWAVEFSPSAARTYKANHPDTIVYSQCSN 646
Query: 165 --------VIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAREL 216
+ QD L+SL LPQ EVD I GPPCQ FS +N ++
Sbjct: 647 KLLEHAIGLAQDSTLPPLRSL-DPEVSECLPPLPQPGEVDFIYGGPPCQSFSNMNHHKK- 704
Query: 217 EKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KNEILQCIF 262
+ +++ LV +S+ + ++P + +LENV G++ + + +++ I
Sbjct: 705 -ANDIRSTLVCNMISYVEYYRPMFFLLENVVGMLSYRLGGEQDHNRVVGGIEMGVVKFIL 763
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN-- 320
L + YQV F VLQ+G +G Q R RV+ L ++ LP+FP P HAF + +N
Sbjct: 764 GSLTILGYQVHFKVLQAGQHGAPQGRRRVIFLGAQRDVPLPAFPLPQHAFPTPVHNVNLP 823
Query: 321 -GNLV-------ANKTSH--APYRSITVRDAISDL-----------------------PR 347
G ++ A++ H AP +TVR+AISDL R
Sbjct: 824 TGEVLHPVIRVGADEDGHQCAPLPPVTVREAISDLVSAKLIDPNSAKRSTPSVLHELGSR 883
Query: 348 VSQGANCYL--------------------FHNPPKTHFQRMMKDGSRIHDIHINLRELLQ 387
++QG + + PP + +Q ++ G+ + +Q
Sbjct: 884 IAQGIARFTACAHDETGQAHPSGFYTPVPYPQPPLSRYQSWLRAGN---------GDTVQ 934
Query: 388 DHICKILSPLMEMRIRLIPSFPNADWRDLP 417
H + LS L+ R+ IP PNA DLP
Sbjct: 935 YHYTRWLSKLVVERVVNIPMKPNAGHEDLP 964
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 11/105 (10%)
Query: 507 TASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDS 566
T + ++ + GR+A + F T +TT P K G+++HP+Q R+LT+RE ARAQGFPD
Sbjct: 977 TGKPKSVYRSLYGRIASNGQFVTAMTTIAPNAKGGRVIHPDQKRILTIRECARAQGFPDR 1036
Query: 567 YVF-------RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
Y F + D +Q+GNAVP PLA A+G K IGNA+
Sbjct: 1037 YQFLSRNEKANDHVADQMRQVGNAVPVPLALALG----KAIGNAL 1077
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 203/477 (42%), Gaps = 79/477 (16%)
Query: 150 RSEAASYDANFQECSVIQ--DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGF 207
R + YD+++ I+ +C +K + + K + LP + D I GPPCQG
Sbjct: 390 RVQWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLP--GQADFICGGPPCQGV 447
Query: 208 SQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCL 265
S NR R KN + ++ + +PKY+++ENV ++ F + + L
Sbjct: 448 SGFNRFRNKNAPLDDEKNKQLIVYMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRL 507
Query: 266 LKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL---FTINGN 322
+ MNYQ ++ +G+YG+ Q R RV + + KLPS+P P H ++
Sbjct: 508 VAMNYQARMGMMAAGSYGLPQFRMRVFLWGALTTEKLPSYPLPTHEVESRSVIPIEFEAI 567
Query: 323 LVANKTSHA--PYRSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDG-----S 373
VA T+ +++ + D I DLP V + + P+T FQ+ ++ +
Sbjct: 568 TVAYSTNEKCQLAKALYLGDTIDDLPPVENDNSDDEKSYGTTPRTDFQKYIRLKRSEMVN 627
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK 433
+ D +L DH L+ R+ IP A++RDL + VK K
Sbjct: 628 YLADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKEKGANFRDLKGVLVK--------ENK 679
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
++++ K+ K K + +++ ++ GRL WD
Sbjct: 680 VEWDPSFKRVYL----------KSGKPLVPDYAMTFVRGTSSK---PFGRLWWD------ 720
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
E T+VT P N+ +LHP+QDRVL+
Sbjct: 721 -------------------------------EIVSTVVTRAEPHNQA--LLHPDQDRVLS 747
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI-IKCIGNAVPPPLA 609
+RE AR QGFPD Y G + Y Q+GNAV P+A A+GY + + +G++ PL
Sbjct: 748 IRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTLGLAILGHSDDGPLT 804
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 191/451 (42%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC ++ ++ HK LP +VD+I GPPCQG S NR R ++ KN
Sbjct: 356 DCPQKIREFVQ--EGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQX 413
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF +PKY++ ENV ++ F + + CL+ YQ +G YG+ Q
Sbjct: 414 VTFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSCLVAXKYQARLGXXVAGCYGLPQ 473
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N VA + P +++ + DA
Sbjct: 474 FRXRVFLWGALSSXVLPKYPLPTYDVVVRGGAPNAFSQCXVAYDETQKPSLKKALLLGDA 533
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRE-------LLQDHICK 392
ISDLP+V Q + + PKT FQR ++ SR + + E L DH
Sbjct: 534 ISDLPKVQNHQPNDVXEYGGSPKTEFQRYIR-LSRKDXLDWSFGEGAGPDEGKLLDHQPL 592
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E + K S
Sbjct: 593 RLNNDDYERVQQIPVKKGANFRDLKGVRV----GANNIVEWDPEIERVKLSSGKPLVPDY 648
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S + ++ P+ GRL WDE+ +P
Sbjct: 649 AXSFIKGKSLKPF----------------GRLWWDET----------VP----------- 671
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ I+HP Q RVLT+RE AR QGFPD Y G
Sbjct: 672 ----------------TVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGP 713
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 714 IKEKYIQVGNAVAVPVARALGY----CLGQA 740
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 197/460 (42%), Gaps = 84/460 (18%)
Query: 156 YDANFQECSVIQ--DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRA 213
YD+++ I+ +C +K + + K + LP + D I GPPCQG S NR
Sbjct: 405 YDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLP--GQADFICGGPPCQGVSGFNRF 462
Query: 214 RE----LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMN 269
R LE K N + +++ D +PKY+++ENV ++ F + + L+ MN
Sbjct: 463 RNKNAPLEDEK--NKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMN 520
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLH------AFSNQLFTINGNL 323
YQ ++ +G+YG+ Q R RV + + KLPS+P P H + I
Sbjct: 521 YQARMGMMAAGSYGLPQFRMRVFLWGALATEKLPSYPLPTHKVVSRSVIPTEFEEITVAY 580
Query: 324 VANKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMK-DGSRIHDIHI 380
N+ +++ + AI+DLP V + + P+T FQ+ ++ S + +
Sbjct: 581 STNENCQLA-KALNLEGAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLQRSEMVNYSA 639
Query: 381 NLRE----LLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY 436
+ + +L DH L+ R+ IP A++RDL + VK K+++
Sbjct: 640 DSQSAPSGMLYDHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVK--------ENKVEW 691
Query: 437 NAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQK 496
+ S K K + +++ ++ GRL WD
Sbjct: 692 DP----------SVERVYLKSGKPLVPDYAMTFVRGTSSK---PFGRLWWD--------- 729
Query: 497 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
E T+VT P N+ +LHPEQDRVL++RE
Sbjct: 730 ----------------------------EIVSTVVTRAEPHNQV--LLHPEQDRVLSIRE 759
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
AR QGFPD Y G + Y Q+GNAV P+A A+GY +
Sbjct: 760 NARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTL 799
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1151
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 168/374 (44%), Gaps = 85/374 (22%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL-KS 176
L+ LD+F+G G G+ +AG K ++E+ S A + N +V D NLVL K+
Sbjct: 665 LRALDVFAGVGAFGLGMEEAGGIKVTHAIEISPSAAKTLKLNAPNVTVYNQDANLVLHKA 724
Query: 177 LLKGHTQHKGVSLP----------------QKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
++ + + P ++D+I+AG PCQ S+LN ++ SK
Sbjct: 725 AMQYYKPELASTDPPLKSLADDKTPLPPPPHPRDIDVILAGFPCQPHSRLNMFQKANDSK 784
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI---------------LQCIFHCL 265
+ L+ LS+ DLF+PKY + ENV G + FN N ++ + + +
Sbjct: 785 --SNLILVLLSYVDLFKPKYCLFENVRGFLQFNLNATQKDQYSVEGGIDMGGIKFLQYAM 842
Query: 266 LKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF-SNQLFTI---NG 321
L M+YQV +LQ G+YG+ Q+R R ++A+K GY LP PQP H F +N I NG
Sbjct: 843 LTMDYQVRIMLLQGGHYGLPQTRIRFFMVAAKRGYHLPEVPQPTHQFPANDGLEIKFTNG 902
Query: 322 NL---VANKTSHAPYRSITVRDAISDLPR----------------VSQGANCYL------ 356
+ V AP+RS T+ DAI DLPR Q + L
Sbjct: 903 MVIRPVQTNGRSAPFRSTTIEDAIGDLPRFDWKNPQKLEKTPLPGTRQREDEVLTLDCDP 962
Query: 357 ------------FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRL 404
+ +PP+T FQ ++ + HIN ++L+ R+R
Sbjct: 963 DKGFVGLTGRMEYFSPPRTSFQFKCRERPTSNLQHIN----------RVLNEGTVERVRN 1012
Query: 405 IPSFPNADWRDLPN 418
IP P AD+R N
Sbjct: 1013 IPLEPRADYRSEEN 1026
>gi|386748487|ref|YP_006221695.1| site-specific DNA methylase [Helicobacter cetorum MIT 99-5656]
gi|384554729|gb|AFI06485.1| site-specific DNA methylase [Helicobacter cetorum MIT 99-5656]
Length = 405
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 204/486 (41%), Gaps = 93/486 (19%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N V D
Sbjct: 7 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGSHIVYGDI--------- 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 57 ---TKIPSNDIPS--ECDILLGGFPCQGFSVANTKRSMEDKR--NFLYKELLRLLRDKQP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 110 KFFVAENVKGLLSMQKGQVIEMIVKDFKSLGYYVDYKLLKASDYGVPQHRERVIIIGNRL 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N L +N NL PY + V+D + L V
Sbjct: 170 GLKNP-FPKKTHGLCNDL--LNENL-------KPY--VCVKDVVGHLADV---------- 207
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH+ HI R + D + D
Sbjct: 208 ---RTRDASFMLDGVMIHN-HI-ARTNVHDKFWGRKHSI-----------------DQHE 245
Query: 419 IC--VKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
IC +K R Q++Y+ K + + ++ K + IP + +
Sbjct: 246 ICDYLKFWRSQNTYSTK-----QIDEHFGYAHTAGHWFRKDNNSGSIP--------KAQD 292
Query: 477 WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNP 536
W + L +D+++D + + + NN W+ DTI T
Sbjct: 293 WWELKRLLRFDDTYDKAVTEFELKEIKFEQSLRINN----------WELPSDTITAT--- 339
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP LA+ I EI
Sbjct: 340 ----GPEIHPNKQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVPVLLAQKIAKEI 395
Query: 597 IKCIGN 602
K + N
Sbjct: 396 FKELKN 401
>gi|385230071|ref|YP_005789987.1| site-specific DNA methylase [Helicobacter pylori Puno135]
gi|344336509|gb|AEN18470.1| site-specific DNA methylase [Helicobacter pylori Puno135]
Length = 405
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 200/493 (40%), Gaps = 115/493 (23%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N V D
Sbjct: 7 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGFHIVYGDI--------- 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 57 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 110 KFFVAENVKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L +
Sbjct: 170 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANI---------- 207
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+T M DG IH +H+ R + +F W
Sbjct: 208 ---RTRDASFMLDGVMIH-----------NHVA---------RTNVYDTF----WGR--- 237
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----RN 474
K P QH + LK+ SC++ K + HTA ++
Sbjct: 238 ---KHPINQHEICDYLKF-------------WRSCSTYSTKQIDEYFGYAHTAGHWFRKD 281
Query: 475 NN---------WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE 525
NN W + L +D+++D + + + NN W+
Sbjct: 282 NNSGSIPKAQDWWELKKLLKFDDTYDKAVTEFELKEIKFEQSLRINN----------WEL 331
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
DTI T G +HP + R ++VRE A Q FP+ ++F G + +MYKQIGNAVP
Sbjct: 332 PSDTITAT-------GPEIHPNRQRRMSVRECAIIQTFPNDFIFYGSLGNMYKQIGNAVP 384
Query: 586 PPLAKAIGYEIIK 598
LA+ I EI K
Sbjct: 385 VLLAQKIAKEIFK 397
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 14/244 (5%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL +++ G GGL GL +G + ++++++ ++ A+ +V D L+
Sbjct: 318 PLSAMEIMCGAGGLSLGLDLSGACETKFAIDMDEDSIRTFKAHHPSATVFCGDAGDALRR 377
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR--ARELEKSKLKNGLVFTFLSFCD 234
+ G +G+ P E+D+I AGPPCQGFS+ NR RE + +N LV + L + D
Sbjct: 378 AMLGLRSQEGLRFPCPGEIDMISAGPPCQGFSRKNRHAHREAAEKDSRNLLVCSVLGWVD 437
Query: 235 LFQPKYIILENVTGL----VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
+PKY ++ENV G + + +++ + CL+KM Y VT QSG +G QSR R
Sbjct: 438 YLRPKYFVMENVEGFTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYAQSGAFGCPQSRKR 497
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQ-----LFTINGNLVANKTS---HAPYRSITVRDAI 342
++LASK LP+ PQP H F + L+ N S A ++T DAI
Sbjct: 498 FLLLASKDEVTLPNLPQPTHEFLGRPAHTFLWEDGSETTYNSASTLVGATLPAVTASDAI 557
Query: 343 SDLP 346
SDLP
Sbjct: 558 SDLP 561
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR--GGICDMY 577
R+ D F ++T + QG +LHP Q R+LTVRE ARAQGFPD F + Y
Sbjct: 683 RVDSDGYFKVLMTK---MTTQGSMLHPTQRRLLTVRECARAQGFPDWVHFHTDANLQSAY 739
Query: 578 KQIGNAVPPPLAKAIGYEI 596
+QIGNAVP PL++AIG +
Sbjct: 740 RQIGNAVPVPLSQAIGKSL 758
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 45/305 (14%)
Query: 83 HFVQPNARPLELAYILKIIHSKEFLPKFPMPL-DTPLKCLDLFSGCGGLMEGLCQAGVAK 141
+FV RPLE K + ++E + + + PL+ +DLFSG GGL G+ Q+G K
Sbjct: 576 NFVIDQKRPLEQCQ--KCLIARELFSESEDSVKELPLRAMDLFSGAGGLTTGMDQSGFIK 633
Query: 142 PCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVS------------- 188
CW+VE + A S AN + V DC+ +LK + + H +
Sbjct: 634 TCWAVERCPAAAQSLKANHADTVVYNQDCSELLKHVAELHAGKTPPTLRSLGPENEALPP 693
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTG 248
LP EVDLI+ GPPCQ FS +N + ++ ++ + T LS+ + + PKY+ +ENVTG
Sbjct: 694 LPSPGEVDLIMGGPPCQPFSGMNSWKRVD--DIRQTCIPTVLSYVEFYSPKYVCIENVTG 751
Query: 249 LVHFN--------------KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
L+++ ++ +++ + + YQ VL + +YG Q RNRV+
Sbjct: 752 LLYYRLKGRQEGRRIVGGIESGMVKFVMRAFTSLGYQCQMKVLNAADYGSPQQRNRVIFW 811
Query: 295 ASKPGYKLPSFPQPLHAFSN-----QLFTING--------NLVANKTSHAPYRSITVRDA 341
A++ LP +P H Q NG N K AP+ ++T+++A
Sbjct: 812 AARLDLALPKWPTQTHIPRQGHKAVQRRITNGFLAPLASRNESGEKHEQAPFYAVTIKEA 871
Query: 342 ISDLP 346
I DLP
Sbjct: 872 IDDLP 876
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG------- 572
RL +E F T++T+ NP +K ++HP RVL+ RE ARAQGFPD Y F
Sbjct: 1001 RLDENEQFRTLMTSYNPGSKGACVIHPTDKRVLSARELARAQGFPDDYEFCPAEERIAVK 1060
Query: 573 ICDMYKQIGNAVPPPLAKAIG 593
+ +M +QIGNAVP LA A+G
Sbjct: 1061 MRNMQRQIGNAVPVHLAYALG 1081
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 180/416 (43%), Gaps = 88/416 (21%)
Query: 188 SLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILEN 245
+L K V + GPPCQG S NR R + KN + FL D +P Y+++EN
Sbjct: 353 TLHLKGTVYSVCGGPPCQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMEN 412
Query: 246 VTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSF 305
V L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P L
Sbjct: 413 VVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGSYGLPQVRNRVFLWAAQPTEDL--- 469
Query: 306 PQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-ANCYLFHN--PPK 362
+ +L ++ ++T+ DAISDLP V+ AN +N PK
Sbjct: 470 --QVGLIQKELLQLDN-------------ALTLADAISDLPPVTNSEANDVRNYNDAAPK 514
Query: 363 THFQRM--MKDGSRIHDIHIN--LRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
T F+ +K + + R L ++ +E RI IP A++RD+P
Sbjct: 515 TDFENFISLKRSETLLPVCGGDPARRLFDHQPLELRDDDLE-RISYIPKKKGANFRDMPG 573
Query: 419 ICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQ 478
+ V H+ +L K+ K K KN + +++ ++ +
Sbjct: 574 VLV------HNNKAQLNLRVKRAK------------LKSGKNVVPAYAVSFIKGKS---K 612
Query: 479 GVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLN 538
GRL W DE +T+VT P N
Sbjct: 613 KPFGRLWW-------------------------------------DEIVNTVVTRAEPHN 635
Query: 539 KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y Q+GNAV P+ A+GY
Sbjct: 636 QC--VIHPMQERVLSVRENARLQGFPDCYKLCGSIKEKYIQVGNAVAVPVGVALGY 689
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 207/489 (42%), Gaps = 85/489 (17%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSG GG+ G+ +AG + W+ + E+ +Y N V+ D + K +
Sbjct: 10 KVISLFSGAGGMDLGIIKAGF-EVIWANDFEKDAVETYRRNIGNHIVLGDITMISSKEI- 67
Query: 179 KGHTQHKGVSLP-QKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
P +K EVDLI+ G PCQGFS N+ R +E + N L L +
Sbjct: 68 -----------PLKKGEVDLIIGGFPCQGFSIANKNRSMEDKR--NFLYKEMLRIIKDKK 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ I ENV G++ + E+++ I + Y+V +L + +YGV Q R RV+I+ ++
Sbjct: 115 PKFFIAENVKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRERVIIMGNR 174
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLV-----ANKTSHAPYRSITVRDAISDLPRVSQGA 352
G K P +P+ HA LF N + T+ PY ITV I L +
Sbjct: 175 LGLKNP-YPKKTHA---DLFPGEENYLLFDEKLKGTNLKPY--ITVEQTIGFLSEID--- 225
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
N F ++ K H + ++++ ++
Sbjct: 226 ----VQNDKLNDFVKVGKRKIYNHIANTSVKDTFWGRKHEV------------------- 262
Query: 413 WRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCK-SSSSCTSKGQKNTIIPWSLVHTA 471
+ +IC L Y +K ++ KK + K ++ K K+ IP
Sbjct: 263 --NQADICDYL----RYYRDKSEWTTKKIDNYFGYKHTAGHWFRKDNKSGSIP------- 309
Query: 472 SRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV 531
+ ++W + L +D+ +D + P + R NW V DTI
Sbjct: 310 -KPSDWWKLKKILKFDDKYDKVVTEFIEKPIKFEQSL-RITNWNRVS---------DTIT 358
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T +H + R L+ RE A Q FPDS+VF G + Y+QIGNAVP LA+
Sbjct: 359 ATSPE-------IHVNKKRRLSARECAMLQTFPDSFVFSGNLSSQYRQIGNAVPVLLAEK 411
Query: 592 IGYEIIKCI 600
IG EIIK +
Sbjct: 412 IGLEIIKKL 420
>gi|171472516|dbj|BAG15984.1| DNA methyltransferase 1 [Meriones unguiculatus]
Length = 196
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 31/206 (15%)
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHA 331
+G YGVAQ+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S
Sbjct: 1 AGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSG 60
Query: 332 PYRSITVRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDH 389
P+R+ITVRD +SDLP + GA+ ++ P++ FQR ++ GS I L+DH
Sbjct: 61 PFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDH 112
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS------ 443
ICK +SPL+ R+R IP FP +DWRDLPNI V+L G + T KL+Y +K+
Sbjct: 113 ICKDMSPLVAARMRHIPLFPGSDWRDLPNIEVRLTDG--TLTRKLRYTFHDRKNGRSSTG 170
Query: 444 ----VCDC-KSSSSCTSKGQK-NTII 463
VC C ++ +C ++ NT+I
Sbjct: 171 AMRGVCSCVEAGKTCDPTARQFNTLI 196
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 78/315 (24%)
Query: 137 AGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHK----------- 185
+GV+ W+VE + + A +Y N V+ DCN +L+ + Q K
Sbjct: 719 SGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQEAMARAGQSKYCVVARGREAE 778
Query: 186 ---GVSLPQKH---------------------EVDLIVAGPPCQGFSQLNRARELEKSKL 221
G + P EV+L+V GPPCQGFS LNR EK+
Sbjct: 779 EGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVGGPPCQGFSGLNRHAGSEKAVR 838
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHFN----------------------KNEILQ 259
N LV ++LS+CD ++P+Y ILENV G + +
Sbjct: 839 NNSLVGSYLSYCDFYRPRYFILENVMGFTFYKPVQPTEGSHKSRQRRRRSKSSPSVSYFK 898
Query: 260 CIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF------- 312
LL M YQV F L +GNYGV QSR R+ I+A+ P LP++P+P+H+F
Sbjct: 899 LALRTLLDMGYQVRFGALNAGNYGVPQSRKRMFIIAALPEEVLPNWPRPMHSFRVAAEAG 958
Query: 313 SNQ--------LFTINGNLVANKT----SHAPYRSITVRDAISDLPRVSQG--ANCYLFH 358
SN+ + G AN + P R++TVRDAI +LP ++ G + +
Sbjct: 959 SNREGQQDQPPIPVPGGMYYANGAGKCLAGTPLRAVTVRDAIGNLPPITPGTKGDPAVPL 1018
Query: 359 NPPKTHFQRMMKDGS 373
P + FQR + + +
Sbjct: 1019 PRPMSAFQRRLAEAA 1033
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQ 561
LV ++R+ G GRL+ F T +TTP + G LHP+ Q R ++VRE AR+Q
Sbjct: 1144 LVERSTRS----GFYGRLSHSGYFRTAITTPRVESSTGWSLHPDTAQQRSVSVRELARSQ 1199
Query: 562 GFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
GFPD + F G Y+Q+GNAVPPPLA A+G ++ + +
Sbjct: 1200 GFPDRHTFGGRTDACYRQVGNAVPPPLALALGLQLRQAL 1238
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 207/489 (42%), Gaps = 103/489 (21%)
Query: 13 DTILGDK-IQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETI 71
D ++ DK I DN LF+T+ S+ + ++ V ++ E+ + + D+
Sbjct: 601 DHVVKDKAIPSDNRRLFMTDVIISVKMKAVEGKAFVACPSSPWQREQWV-----KADDHF 655
Query: 72 YTEYYRKT---KDKHFVQPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCG 128
Y + + K+ + +QP A + + + + + + L+ L+LF+G G
Sbjct: 656 YCDLFAKSLTPQSLEILQPTAL-VHCNRCYAAVLEEATEEELLLKTSSKLRGLELFAGAG 714
Query: 129 GLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL---KGHTQHK 185
GL GL +G + W+VEL S ++ AN Q V + + +L+ ++ +GH
Sbjct: 715 GLSTGLDLSGFVETRWAVELSESACKTFQANHQSSLVYNQNTSTLLQHVVDTAEGHHPRP 774
Query: 186 GVS--------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
VS +PQ+ EVD I GPPCQ FSQ+N ++++ + + L +S+ + ++
Sbjct: 775 LVSKTGTNLPPMPQRGEVDFIYGGPPCQSFSQINHNKKIDDPR--STLACNMISYVEFYR 832
Query: 238 PKYIILENVTGLVH-----------FNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYG 283
P Y +LENV G+++ ++N +++ I L + YQV F +LQ+G YG
Sbjct: 833 PMYFLLENVRGILNAPTDGQPRDQPLDRNICMGVVKFILRSLTALGYQVHFRILQAGQYG 892
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPY---------- 333
Q R RV+ L ++ LP FP P H + ++ + + PY
Sbjct: 893 TPQGRQRVIFLGARCDIPLPQFPTPQHDYPK---SVQAKNLPDGGVLYPYLRPTGCGQAC 949
Query: 334 ---RSITVRDAISDLP-----------------------RVSQGANC------------- 354
+IT +AI DLP R+++G C
Sbjct: 950 VSLPAITTEEAIGDLPKFDWKNPHLVIARSRQDVQKGQARLAEGIICVEAVPSPSRSLTG 1009
Query: 355 ----YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ PP + FQ ++ S I H R SP + R+ +P P
Sbjct: 1010 FPTPVAYPQPPLSRFQSWVRGDSDIVTYHYTRR----------WSPAVVERVVNVPIQPG 1059
Query: 411 ADWRDLPNI 419
A+ DLP I
Sbjct: 1060 ANHADLPKI 1068
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
IP L S + + V GR+ D F T +TT P K GK++HP Q+R++T+RE AR
Sbjct: 1071 IPCWLNPDGSSKSAYTTVYGRIDNDGCFMTALTTLAPNQKGGKVIHPTQNRIITIREAAR 1130
Query: 560 AQGFPDSYVFRG-------GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
AQGFPDSY F + D +QIGNAVP PLA A+G EI K +
Sbjct: 1131 AQGFPDSYQFLSIHDLPNRCLDDQARQIGNAVPVPLAAALGKEIGKSL 1178
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 179/420 (42%), Gaps = 77/420 (18%)
Query: 168 DDCNLVLKSLL-KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNG 224
D C +K + KG K LP EV +I GPPCQG S NR R KN
Sbjct: 147 DGCQEKIKDFVAKGF---KASILPLPGEVQVICGGPPCQGVSGFNRFRNSTNPLGDSKNK 203
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ TF+ + P+++++ENV LV F + + L+ MNYQ ++ +G YG+
Sbjct: 204 QLETFMDIVEFLNPQFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGAYGL 263
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLH-----AFSNQLFTINGNLVANKTSHAPYRSITVR 339
Q R RV + + P KLP +P P H + F +N R + ++
Sbjct: 264 PQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKVELKRELFLK 323
Query: 340 DAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
DAISDLP V + + + + PK+ FQ ++ SR + L +L DH L+
Sbjct: 324 DAISDLPPVENDEPTDEMPYIDEPKSAFQHFIR--SRRNG---TLGSVLYDHRPLRLNED 378
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKG 457
R+ IP A++RDLP + V+ + T +L + ++ K
Sbjct: 379 DYQRVCQIPKRKGANFRDLPGVRVR-----ANNTVELDPDVERVKVASG----------- 422
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGV 517
K + +++ + GRL WDE I+P
Sbjct: 423 -KPLVPDYAITFVRGTSTK---PFGRLWWDE----------IVP---------------- 452
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
T+VT P N+ ILHPEQDRVLT+RE AR QGFPD Y G I + Y
Sbjct: 453 -----------TVVTRAEPHNQV--ILHPEQDRVLTIRENARLQGFPDYYKLTGPIKERY 499
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 153/323 (47%), Gaps = 35/323 (10%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
L+ L LDLF+G GGL EGL +AG ++ E+ A +Y AN V D V
Sbjct: 7 LEGRLTSLDLFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYGANHPSTHVDNQDIREV 65
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ K + L ++ E+DLI GPPCQGFS R E S+ N L +L F
Sbjct: 66 DARKVR-----KSLGL-KRGELDLIAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFV 117
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
FQP+ +++ENV G+V F L I L + Y +L + +YGV Q+R R +I
Sbjct: 118 TEFQPRAVLIENVPGMVSFEGGATLDAILESLKDLGYDADVRILYAPHYGVPQTRWRTII 177
Query: 294 LASKPGYKLPS-FPQPLH------AFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
L S+ G + FP+PLH F++Q NLV S +TV+DAI DLP
Sbjct: 178 LGSRCGVDPTALFPEPLHHAPVRVNFTSQF--AGKNLVNLPRSLELPSHVTVKDAIGDLP 235
Query: 347 RVSQ---GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
+ G + +P +Q++M+ GS I + H LS + R+
Sbjct: 236 ALCNGEIGEQVKDYRHPADNPYQQLMRAGS----IGVTC------HEAGRLSKINLERMT 285
Query: 404 LIPSFPNADWRDLPNICVKLPRG 426
IP P +W D+P+ LP G
Sbjct: 286 HIP--PGGNWTDIPDAL--LPSG 304
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 498 TIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T IP +L+ + +R ++ GR+ + TI+T +P G H EQDR TV
Sbjct: 294 TDIPDALLPSGMRMARRSDHTKRYGRVNPEGLASTILTKCDP--HWGAYFHYEQDRAFTV 351
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPD+YVF G + Y+Q+GNAVPP L A+G I +G+
Sbjct: 352 REAARIQSFPDTYVFCGSRVEQYEQVGNAVPPLLGAAVGQAIAFALGS 399
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 177/435 (40%), Gaps = 77/435 (17%)
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFL 230
V + +L+G Q LP + D+I GPPCQG S NR R + +N + ++
Sbjct: 299 VKEFVLEGRRQK---LLPLPGDCDVICGGPPCQGASGFNRFRNRVDPLADPRNKQMVVYM 355
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
D +P++ I+ENV ++ F + + + MNYQ ++ +G YG+ Q R R
Sbjct: 356 DIVDFLRPRFFIMENVVDILKFCDGILGRYALARAVGMNYQSKVGIMVAGCYGMPQFRAR 415
Query: 291 VVILASKPGYKLPSFPQPLH------AFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
+ + LP +P P H F + NK + ++DA+SD
Sbjct: 416 CFLWGAASDEILPPYPMPTHKVIVRGGFPQKWERCLVAYEENKQPEWLQLPLVLKDALSD 475
Query: 345 LPRVS--QGANCYLFHNPPK---THFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
LP V Q + + P+ HF R+ K GS + +L DH L+
Sbjct: 476 LPAVGNDQSKDDISYDEEPQCDFQHFLRLPKKGSL--GPQQKKKAILPDHRPLCLNADDY 533
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQK 459
R++ IP A++RDL I + K D K K
Sbjct: 534 ERVKQIPKKKGANFRDLKGIII-----------------KADGVTVDVVREPRELLKSGK 576
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
+ +++ R+ GRL WDE+ +P
Sbjct: 577 PLVPDYAISFIRGRSFK---PFGRLWWDET----------VP------------------ 605
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
T+VT P N+ ILHPEQDRVLT+RE AR QGF D Y G I Y Q
Sbjct: 606 ---------TVVTRAEPHNQ--IILHPEQDRVLTIRENARLQGFSDYYKLFGPIKQRYMQ 654
Query: 580 IGNAVPPPLAKAIGY 594
+GNAV P+A A+GY
Sbjct: 655 VGNAVAVPVATALGY 669
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 152/323 (47%), Gaps = 35/323 (10%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
++ L LDLF+G GGL EGL +AG ++ E+ A +Y AN V D V
Sbjct: 1 MEGRLTSLDLFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYAANHPATQVDSRDIRKV 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ K + L ++ E+DL+ GPPCQGFS R E S+ N L +L F
Sbjct: 60 DARKVR-----KLLGL-KRGELDLVAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
FQP+ +++ENV G+V F L I L ++ Y +L + +YGV Q+R R +I
Sbjct: 112 TEFQPRAVLIENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTII 171
Query: 294 LASKPGYK-LPSFPQPLHA------FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
L S+ G + FP+PL F++Q NLV S +TV+DAI DLP
Sbjct: 172 LGSRCGVDPMALFPEPLRQAPVRVNFTSQF--AGKNLVNLPRSLELPSHVTVKDAIGDLP 229
Query: 347 RVSQ---GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
+ G + +P +Q++M+ GS H R LS + R+
Sbjct: 230 ALHNGEIGEQVKDYRHPADNPYQQLMRAGSTGVTCHEAAR----------LSKINLERMT 279
Query: 404 LIPSFPNADWRDLPNICVKLPRG 426
IP P +W D+P LPRG
Sbjct: 280 HIP--PGGNWTDIPEAL--LPRG 298
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 498 TIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T IP +L+ +R ++ GR+ D TI+T +P G H EQDR TV
Sbjct: 288 TDIPEALLPRGMRMARRSDHTKRYGRVNPDGLASTILTKCDP--HWGAYFHYEQDRAFTV 345
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPD+YVF G + Y+Q+GNAVPP L A+G I + +G+
Sbjct: 346 REAARIQSFPDTYVFCGSRVEQYEQVGNAVPPLLGAAVGRAIAQVLGS 393
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 34/256 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LDL+ G GGL GL ++G + CW V+L S ++ NF I N VL+
Sbjct: 839 LRALDLYHGAGGLSHGLEKSGAFETCWGVDLSPSAHMTFKKNFPNAIAIFQCANEVLRHA 898
Query: 178 LKGH--TQHKGV-----------SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
++ H + LP + D+I+ GPPCQG+S LN R + +KN
Sbjct: 899 IENAQGADHDSLYPIGGGDVACPPLPNPGDPDIIICGPPCQGYSVLNSYRRTDD--IKNT 956
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KNEILQCIFHCLLKMNY 270
LV LS+ D F+P++ +LENV L++ +N + + I L Y
Sbjct: 957 LVANALSYVDYFRPRFFLLENVQPLLNSRGKVLKPGDIDERIIENAVRKFIVRFLTARGY 1016
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH 330
QV VLQ+G +GVAQ R RV A+K LP FP P H ++ + L
Sbjct: 1017 QVRVTVLQAGEFGVAQHRARVFFWAAKRNEALPEFPLPTHTWARTTPSRRDAL-----GG 1071
Query: 331 APYRSITVRDAISDLP 346
AP +TV+D I DLP
Sbjct: 1072 APLPCVTVKDVIGDLP 1087
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
A+R +G R+ D T++T P KQG++LH Q+RVL+ +E AR QGF D++
Sbjct: 1203 AARGGYGEGKYARVYPDRPARTVLTRNEPTGKQGRVLHYNQNRVLSAQENARLQGFADTF 1262
Query: 568 VFRGG---ICDMYKQIGNAVPPPLAKAIGYEI 596
F G + D+ + IGNAVP PL +G ++
Sbjct: 1263 TFISGTDDLRDIMRLIGNAVPIPLGYHLGRQL 1294
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium
reilianum SRZ2]
Length = 768
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 15/279 (5%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL +++ G GGL GL +G + ++++ + ++ ++ + V D L+
Sbjct: 311 APLIGMEIMCGAGGLSLGLDLSGACETKFAIDADADSIKTFRSHHPQAKVFCCDAGDALR 370
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRA--RELEKSKLKNGLVFTFLSFC 233
+ G +GV PQ+ +VD+I AGPPCQGFS NR RE + +N LV T L +
Sbjct: 371 RAISGRLSAQGVPFPQRGQVDVISAGPPCQGFSHRNRTAPREAAQQDPRNLLVCTVLGWV 430
Query: 234 DLFQPKYIILENVTGL----VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+ QPKY+ILENV G + K +++ + CLL + Y T +QSG G QSR
Sbjct: 431 EHLQPKYLILENVEGFTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFVQSGASGCPQSRG 490
Query: 290 RVVILASKPGYKLPSFPQPLHAF----SNQLFTINGN-----LVANKTSHAPYRSITVRD 340
R ++LA++ LP P P H F +N +G ++ A +ITV D
Sbjct: 491 RFILLAARRDLVLPRLPLPTHQFLGRKANPFTWTDGTGKTYAAQRASSAAAMLPAITVSD 550
Query: 341 AISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIH 379
AI DL R ++ P +R + ++ +H
Sbjct: 551 AIGDLSRFDWKDPHQVYAGPDTIELERAQRGIKQLAVVH 589
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG---ICDMYKQIGNA 583
F ++TTP + G ++HP+Q R+ +VRE ARAQGFPD F G + Y+QIGNA
Sbjct: 688 FKALMTTPTAV---GSMIHPDQRRIFSVRECARAQGFPDWIEFECGDANVSAAYRQIGNA 744
Query: 584 VPPPLAKAIGYEI 596
VP PLA A+ +
Sbjct: 745 VPVPLAVALAKSL 757
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 150/319 (47%), Gaps = 35/319 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLF+G GGL EGL +AG ++ E+ A +Y AN V D V
Sbjct: 1 MTSLDLFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYAANHPATQVDSRDIRKVDARK 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
++ K + L ++ E+DL+ GPPCQGFS R E S+ N L +L F FQ
Sbjct: 60 VR-----KLLGL-KRGELDLVAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFVTEFQ 111
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ +++ENV G+V F L I L ++ Y +L + +YGV Q+R R +IL S+
Sbjct: 112 PRAVLIENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSR 171
Query: 298 PGYK-LPSFPQPLHA------FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G + FP+PL F++Q NLV S +TV+DAI DLP +
Sbjct: 172 CGVDPMALFPEPLRQAPVRVNFTSQF--AGKNLVNLPRSLELPSHVTVKDAIGDLPALHN 229
Query: 351 ---GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
G + +P +Q++M+ GS H R LS + R+ IP
Sbjct: 230 GEIGEQVKDYRHPADNPYQQLMRAGSTGVTCHEAAR----------LSKINLERMTHIP- 278
Query: 408 FPNADWRDLPNICVKLPRG 426
P +W D+P LPRG
Sbjct: 279 -PGGNWTDIPEAL--LPRG 294
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 498 TIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T IP +L+ +R ++ GR+ D TI+T +P G H EQDR TV
Sbjct: 284 TDIPEALLPRGMRMARRSDHTKRYGRVNPDGLASTILTKCDP--HWGAYFHYEQDRAFTV 341
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPD+YVF G + Y+Q+GNAVPP L A+G I + +G+
Sbjct: 342 REAARIQSFPDTYVFCGSRVEQYEQVGNAVPPLLGAAVGRAIAQVLGS 389
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 131/276 (47%), Gaps = 48/276 (17%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ LDLFSG GGL GL + W+VE S A SY AN + V NL+L+
Sbjct: 579 PLRALDLFSGAGGLSTGLNCSDSVNTKWAVEFSPSAALSYQANHPDTIVYNQCTNLLLQH 638
Query: 177 LLKGHTQHKGV---------------SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
+ +HK SLP+ EVD I GPPCQ FS +N +++ + +
Sbjct: 639 AIDT-LEHKKTGPLMSLNEKKRTQLPSLPKPGEVDFIFGGPPCQSFSLMNHSKKADD--I 695
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGL--------------VHFNKNEILQCIFHCLLK 267
++ LV LS+ +L++P Y ++ENV G+ V K +++ I
Sbjct: 696 RSTLVCNMLSWVELYRPSYFLIENVIGMLFHPLGGEQSGRSVVGGVKMGMVKFIVRAATA 755
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLV 324
+ YQ+ F VLQ+G YG Q R R++ + ++ LP FP P H+F + N G+ +
Sbjct: 756 LGYQIHFRVLQAGQYGAPQGRRRLIFIGARRDLPLPQFPAPSHSFPRKTQCYNLPTGDTL 815
Query: 325 ANKTS-------------HAPYRSITVRDAISDLPR 347
T AP ++TV DAI DLP+
Sbjct: 816 QPITRCQIDEEDDITLEPWAPLPTVTVMDAIGDLPQ 851
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG- 572
++G+ GR+ + F T +TT P K G++LHP Q R++TVRE ARAQGFPD Y F
Sbjct: 971 YRGIYGRIDGNGHFWTAMTTIKPNAKGGRVLHPTQKRIITVRECARAQGFPDHYKFLSNN 1030
Query: 573 ------ICDMYKQIGNAVPPPLAKAIGYEI 596
I D ++QIGNAVP PLA A+G EI
Sbjct: 1031 SRLYDVIADQHRQIGNAVPVPLAMALGKEI 1060
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ ++LFSG GL G+ +G K CW+VE S A S AN + V DCN +LK
Sbjct: 607 PLRAMNLFSGASGLTVGMDHSGFVKTCWAVEHSPSTARSLKANHEGIIVYNRDCNDLLKY 666
Query: 177 LLK-------------GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
+ G + SLP+ EVDLI+ GPPCQ ++ LNR + ++ ++
Sbjct: 667 AVDLEAGKRLPDLLSLGPEKEVLPSLPRPGEVDLIMGGPPCQPYTGLNRFKRID--DIRQ 724
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KNEILQCIFHCLLKMN 269
+ T LS+ + + PKY+++ENVT ++H+ + +++ I L +
Sbjct: 725 TCIPTLLSYVEFYSPKYVLIENVTSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLTSLG 784
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVAN--- 326
YQ + VL S +YG R V A++ LP +P P H T+N + N
Sbjct: 785 YQCSLKVLNSVDYGSPHQRKCVFFWAARRDLLLPKWPIPTHIPRRGHNTVNRRITNNYQA 844
Query: 327 ----------KTSHAPYRSITVRDAISDL 345
K AP+ ++TV++AI DL
Sbjct: 845 PLASRDGRDVKHERAPFYAVTVKEAIDDL 873
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 519 GRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF-----R 570
GRL W + F ++ TT +P + I+HP RVLT+RE ARAQGFPD Y F R
Sbjct: 989 GRL-WKDLNGQFHSLQTTIHPGARNAYIIHPTDRRVLTLRELARAQGFPDDYEFCSVKER 1047
Query: 571 GGIC--DMYKQIGNAVPPPLAKAIG 593
+ D+ +QI AVP A A+G
Sbjct: 1048 ADLQLKDIERQIACAVPVQQAYALG 1072
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 196/451 (43%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC ++ ++ HK LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 487 DCPQKIRDFVQ--EGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQM 544
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 545 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 604
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 605 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALLLGDA 664
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRE-------LLQDHICK 392
ISDLP+V Q + + PKT FQR ++ SR + + E L DH
Sbjct: 665 ISDLPKVQNHQPNDVMEYGGSPKTEFQRYIR-LSRKDMLDWSFGEGAGPDEGKLLDHQPL 723
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
L+ R++ IP A++RDL + V G ++ E + K S
Sbjct: 724 RLNNDDYERVQQIPVKKGANFRDLKGVRV----GANNIVEWDPEIERVKLSSGKPLVPDY 779
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S + ++ P+ GRL WDE+ +P ++V A +N
Sbjct: 780 AMSFIKGKSLKPF----------------GRLWWDET----------VP-TVVTRAEPHN 812
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
++ P Q ++L T+RE AR QGFPD Y G
Sbjct: 813 Q----------------VIIHPT----QARVL--------TIRENARLQGFPDYYRLFGP 844
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 845 IKEKYIQVGNAVAVPVARALGY----CLGQA 871
>gi|365837695|ref|ZP_09379055.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
gi|364561408|gb|EHM39312.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
Length = 346
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 185/484 (38%), Gaps = 143/484 (29%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K D FSGCGG GL AG + ++++ A ++ NF + I DD V ++
Sbjct: 3 IKVFDFFSGCGGTSAGLKAAGF-DIVFGLDIDNESAGTFTKNFSDAFFINDDIRNVDVNI 61
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K + E+ L PCQ FS+ N ++ + +L L++ F F + Q
Sbjct: 62 IKDMVD----TYKANSELVLFCGCAPCQPFSRQNNQKKTDDPRLN--LLWEFGRFVETCQ 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMN-YQVTFDVLQSGNYGVAQSRNRVVILAS 296
P ++++ENV G+ + + F L+K N Y V+ + YGV Q R R V+LAS
Sbjct: 116 PDFVLVENVPGIQKLDVSSGPLLSFIELIKSNKYHSNHGVIPAIWYGVPQKRERFVLLAS 175
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
K + P+ H PY TVRD ISDLP +S G
Sbjct: 176 KK--SIVELPEQTH----------------DGETTPYS--TVRDWISDLPPISAG----- 210
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+TH Q M DH LS L RI+ P
Sbjct: 211 -----ETHPQIM-------------------DHAAPSLSALNIKRIKATPE--------- 237
Query: 417 PNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
+G+ S+ E+L K +N
Sbjct: 238 -------GKGRESWPEELMLECHKN--------------------------------HNG 258
Query: 477 WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNP 536
V GRLAWD+ +G I +S
Sbjct: 259 HSDVYGRLAWDKP--ASGLTTRCISYS--------------------------------- 283
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
G+ HPEQ+R L+VRE A Q FP Y+F G + KQIGNAVPP +A+A+G I
Sbjct: 284 ---NGRFGHPEQNRALSVREAASLQTFPRDYLFHGSLSSKAKQIGNAVPPKMAEALGKAI 340
Query: 597 IKCI 600
+K I
Sbjct: 341 LKSI 344
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 181/423 (42%), Gaps = 73/423 (17%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYI 241
+K LP +VD+I GPPCQG S NR R E KN + F+ + +P+++
Sbjct: 562 YKSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFV 621
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
++ENV +V F + + L+ MNYQ ++ +G YG+ Q R RV + ++
Sbjct: 622 LMENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEV 681
Query: 302 LPSFPQPLHAFSNQL---FTINGNLVANKTSH---APYRSITVRDAISDLPRVS--QGAN 353
LP +P P H + N VA H + + DAISDLP V+ + +
Sbjct: 682 LPQYPLPTHDVIIRGVIPLEFEMNTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARD 741
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ P+T FQR + R+ + LL DH L+ R+ IP A++
Sbjct: 742 EMPYGKAPQTEFQRFI----RLRKNGLQTNSLLYDHRPLELNADDYQRVCQIPKTKGANF 797
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASR 473
RDLP + V K++++ ++ K + +++
Sbjct: 798 RDLPGVLV-------GADNKVEWDPNVERIYL----------PSGKPLVPDYAMSFVGGS 840
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
++ GRL WDE+ +P + E + ++
Sbjct: 841 SSK---PFGRLWWDET----------VPTVVTRA-----------------EPHNQVILH 870
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
P +Q ++L ++RE AR QGFPD Y RG + + Y Q+GNAV P+A+A+G
Sbjct: 871 P----EQDRVL--------SIRENARLQGFPDYYQLRGPVKERYIQVGNAVAVPVARALG 918
Query: 594 YEI 596
Y +
Sbjct: 919 YAL 921
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 196/451 (43%), Gaps = 82/451 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC ++ ++ HK LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 484 DCPQKIREFVQ--EGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQM 541
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 542 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 601
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 602 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALLLGDA 661
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
ISDLP+V Q + + PKT FQR ++ D S + +LL +
Sbjct: 662 ISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLR 721
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
+ + E R++ IP A++RDL + V G ++ E + K S
Sbjct: 722 LNNDDYE-RVQQIPVKKGANFRDLKGVRV----GANNIVEWDPEIERVKLSSGKPLVPDY 776
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S + ++ P+ GRL WDE+ +P ++V A +N
Sbjct: 777 AMSFIKGKSLKPF----------------GRLWWDET----------VP-TVVTRAEPHN 809
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
++ P Q ++L T+RE AR QGFPD Y G
Sbjct: 810 Q----------------VIIHPT----QARVL--------TIRENARLQGFPDYYRLFGP 841
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 842 IKEKYIQVGNAVAVPVARALGY----CLGQA 868
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 205/484 (42%), Gaps = 81/484 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LF+G GG+ G +AG W+ + E+ +Y N + V D + +K+
Sbjct: 6 VISLFAGAGGMDLGFKKAGF-NIIWANDFEKDAVTTYKNNIGDHIVYGDITKIDIKN--- 61
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
LP + E+DL++ G PCQGFS N R ++ + N L L +L +PK
Sbjct: 62 --------ELPNEEEIDLVIGGFPCQGFSVNNIKRNMKDKR--NFLYLELLKVIELKKPK 111
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+ + ENV GL+ K +++ I + Y+V + +L + +YGV Q+R RV+I+ ++ G
Sbjct: 112 FFVAENVKGLLSMEKGKVIDMIVKDFENLGYEVDYQLLNAADYGVPQARERVIIIGNRIG 171
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHN 359
+ P FP H + N + K+ +TV +AI L +
Sbjct: 172 VENP-FPVISHVAPDD----NLSFFDYKSDEELKTHVTVEEAIGFLGDIE---------- 216
Query: 360 PPKTHFQRMMKDGSRIHDIHINLRELLQDHIC--KILSPLMEMRIRLIPSFPNADWRDLP 417
+++G I +N R++ +H+ K+ + + +
Sbjct: 217 ---------IQNGKVNDYIKVNDRKIY-NHVASTKVGDKFFGRKYSV----------NQH 256
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNW 477
+IC L Y +K ++ KK K ++ + N+ + + +W
Sbjct: 257 DICDYL----RFYRDKSEWTTKKIDEHFGYKHTAGHWFRKDNNS-------GSIPKPKDW 305
Query: 478 QGVLGRLAWDESFDMTGQKNTIIPWSLVHTAS-RNNNWQGVLGRLAWDESFDTIVTTPNP 536
+ L +D+ +D T + + S R NW D DTI T
Sbjct: 306 WELKKILKFDDKYDKV--VTTFVEKDIKFEQSLRITNW---------DRPSDTITATMPE 354
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ H + R L+ RE A Q FPD +VF G + +++QIGNAVP LA+ IG EI
Sbjct: 355 I-------HVNKTRRLSARECAILQTFPDDFVFYGALNSLHRQIGNAVPVLLAEKIGLEI 407
Query: 597 IKCI 600
K I
Sbjct: 408 GKVI 411
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 168/382 (43%), Gaps = 68/382 (17%)
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
+ TF+ +PKY+++ENV ++ F + + L+ M YQ ++ +G YG+
Sbjct: 1 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLP 60
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAPY--RSITVRD 340
Q R RV + + P LP +P P H + N ++VA + P ++ + D
Sbjct: 61 QFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGD 120
Query: 341 AISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLM 398
AISDLP V+ Q + + PKT FQR I ++ +E+L
Sbjct: 121 AISDLPEVNNHQPNEVMEYGSSPKTEFQRY---------IRLSRKEMLDS---------- 161
Query: 399 EMRIRLIPSFPNADWRDLPNIC----VKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
SF D DL + +KL + H +++ KK + D K
Sbjct: 162 --------SFEGKDGPDLGKLLDHQPLKLNKDDHERVQQIP--VKKGANFRDLKG----V 207
Query: 455 SKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNW 514
G N + W + R+ ++ K + +++ R+
Sbjct: 208 RVGANNIV-------------EWDPDVPRVY------LSSGKPLVPDYAMSFIKGRSLK- 247
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
GRL WDE+ T+VT P N+ ILHP Q RVLTVRE AR QGFPD Y G I
Sbjct: 248 --PFGRLWWDETVPTVVTRAEPHNQ--IILHPNQARVLTVRENARLQGFPDYYKMFGPIK 303
Query: 575 DMYKQIGNAVPPPLAKAIGYEI 596
+ Y Q+GNAV P+A+A+GY +
Sbjct: 304 EKYIQVGNAVAVPVARALGYSL 325
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 24/245 (9%)
Query: 185 KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL----KNGLVFTFLSFCDLFQPKY 240
K ++P E+DLI GPPCQGFS LNR +E + SK KN LV FL + F+PKY
Sbjct: 1019 KYANIPAPDEIDLIAGGPPCQGFSLLNRFKETDSSKFLSHDKNRLVLVFLDYVKYFKPKY 1078
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK--P 298
+++ENVTG+++ ++ I L Y+ F + + ++G+ Q+R RV+ ++
Sbjct: 1079 VLIENVTGILNTTVFDVPSAIIEKLDARGYEAKFSTVNAQHFGLPQTRTRVIFFGARKDE 1138
Query: 299 GYKLPSFPQPLHAFSNQLFTINGN-----LVAN--KTSHAPYRSITVRDAISDLPRVSQG 351
K+P FP+ HA S+++ + N LVAN K P +++RD ISDL
Sbjct: 1139 NLKVPDFPKNTHA-SHKVSAVLDNASQVKLVANVRKIVAGPLPPVSLRDVISDLIPFEDS 1197
Query: 352 ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA 411
+ + PPKT +Q++ + S + DHI + + I+ +P +P
Sbjct: 1198 SESTAEYLPPKTVYQKLYRKDS----------DTCIDHISQSYGEVTSALIKCLPRYPGC 1247
Query: 412 DWRDL 416
++RDL
Sbjct: 1248 NFRDL 1252
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
+ +L RL W +S T+VT NP + K++HP Q RV++VRE AR QGFPD ++F G I
Sbjct: 1272 KNILARLQWSKSCPTLVTHLNPYSM--KVIHPNQHRVISVREAARCQGFPDDFIFTGSIH 1329
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
D YKQIGNAVP +AKA+G EIIK N
Sbjct: 1330 DKYKQIGNAVPVNMAKALGGEIIKAYTN 1357
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 2 KAHVQWLVRPNDTIL------GDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSS 55
+ V+WL R D + + + +D+ L+LT+ + + IK C F +
Sbjct: 767 QMRVRWLRRYQDIKILTTGEYHNVLCYDHQELYLTDEYDDNFIKNIKGR-CAVFFVRKTE 825
Query: 56 EEEILDNEHEEKDETIYTEYYRKTK----DKHFVQPNARPLELAYILKIIHSK------E 105
+ E ++ ++KD +Y K+K + P E+ K + + +
Sbjct: 826 DFEKIEGSRDKKDI-----FYCKSKIVIVGEQISLLELSPQEIELTFKCMENNLNAIKDQ 880
Query: 106 FLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
F+PK + LD+FSGCGGL GL +AG+ +S+E + A ++ F++C
Sbjct: 881 FIPK------EKITALDIFSGCGGLSLGLERAGIHVK-YSIEFWKPAADTHHYYFKDCHT 933
Query: 166 IQDDCNLVLKSL 177
+ LK +
Sbjct: 934 FCKNAEEFLKHI 945
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 152/323 (47%), Gaps = 35/323 (10%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
L+ L LDLF+G GGL EGL +AG ++ E+ A +Y N V D V
Sbjct: 7 LEGRLTSLDLFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYAVNHPGTQVDSQDIRKV 65
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ K + L ++ E+DLI GPPCQGFS R E S+ N L +L F
Sbjct: 66 DARKVR-----KLLGL-KRGELDLIAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFV 117
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
FQP+ +++ENV G+V F L I L ++ Y +L + +YGV Q+R R +I
Sbjct: 118 TEFQPQAVLIENVPGMVSFEGGATLDAILAALKQLGYDADVRILYAPHYGVPQTRWRTII 177
Query: 294 LASKPGYKLPS-FPQPLHA------FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
L S+ G + FP+PL F++Q NLV S +TV+DAI DLP
Sbjct: 178 LGSRCGVDPTALFPEPLRQAPVRVNFTSQF--AGKNLVNLPRSLELPSHVTVKDAIGDLP 235
Query: 347 RV---SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
++ G + +P +Q++M+ GS H R LS + R+
Sbjct: 236 KLRNGEMGEPVKDYRHPADNPYQQLMRVGSTGVTCHEAAR----------LSKINLERMT 285
Query: 404 LIPSFPNADWRDLPNICVKLPRG 426
IP P +W D+P+ LP G
Sbjct: 286 HIP--PGGNWTDIPDAL--LPSG 304
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 498 TIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T IP +L+ + +R ++ GR+ D TI+T +P G H EQDR TV
Sbjct: 294 TDIPDALLPSGMRLARRSDHTKRYGRVNPDGLASTILTKCDP--HWGAYFHYEQDRAFTV 351
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPDSYVF G + Y+Q+GNAVPP L A+G I + +G+
Sbjct: 352 REAARIQSFPDSYVFCGSRVEQYEQVGNAVPPLLGAAVGRAIAQVLGS 399
>gi|358385860|gb|EHK23456.1| hypothetical protein TRIVIDRAFT_349, partial [Trichoderma virens
Gv29-8]
Length = 1029
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 201/492 (40%), Gaps = 102/492 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ +DLF G G GL G K W+ + + +Y AN + D + L S+
Sbjct: 613 LRGIDLFCGGGNFGRGLEDGGGIKMKWANDYDSKAIHTYMANVSKPG----DVHPFLGSI 668
Query: 178 LKGHTQHKGV------SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
QH + ++P+ +VD + G PC GFS L + + LV F S
Sbjct: 669 --DDLQHFAIRGQFADNVPRIGDVDFVSGGSPCPGFSILTNDKTTAAQRKNQSLVAAFAS 726
Query: 232 FCDLFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
F DL++PKY +LENV G++H ++ ++ + L+ + YQ F L + + G Q R
Sbjct: 727 FVDLYRPKYGVLENVPGMIHKKESRDQDVFSQLICSLVGLGYQTQFFFLDASSCGSPQRR 786
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
+R+ ++ + PG +LP P H+
Sbjct: 787 SRIFVIFAAPGLELPKKPVQTHS------------------------------------- 809
Query: 349 SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
+PPKT R + G + H+ RE+ K +S E +P
Sbjct: 810 ----------HPPKT---RELGIGWLPNGQHMATREMPAATPFKYIS--AEEAAADLPPI 854
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPW--S 466
+A P+ICV P H T L + + SV + PW S
Sbjct: 855 HDAK----PDICVPYP--DHRSTSGLTKMMRARISVIPVR---------------PWGMS 893
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTG----QKNTIIPWSLVHTASRNNNWQGVLGRLA 522
+N +G G + E TG + + +P S V SR GR+
Sbjct: 894 FAQAWYGDNKAEGGSGTMTAAERELFTGTNGVRDTSKLPLS-VQPQSR------AYGRMF 946
Query: 523 WDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
++ FDTI T P + K G++LH ++R++++ E RAQGF D V G + Y+ +G
Sbjct: 947 PNKLFDTITTRPTTNDAKNGRLLHWRENRLISIMEARRAQGFRDEEVLLGDPVNQYRIVG 1006
Query: 582 NAVPPPLAKAIG 593
N+V +A A+G
Sbjct: 1007 NSVARQIAVALG 1018
>gi|385261866|ref|ZP_10039983.1| putative modification methylase BspRI [Streptococcus sp. SK643]
gi|385192588|gb|EIF39993.1| putative modification methylase BspRI [Streptococcus sp. SK643]
Length = 406
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 200/489 (40%), Gaps = 105/489 (21%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LFSG GG+ G AG W+ + ++ +Y N + V+ D
Sbjct: 6 LISLFSGAGGMDLGFKNAGF-NILWANDFQKDAVETYRKNIGDHIVLGD----------- 53
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
TQ +P ++D+++ G PCQGFS N R +E + N L L QPK
Sbjct: 54 -ITQIDSSEIPGT-DIDVVIGGFPCQGFSIANSKRNMEDHR--NFLYLELLRVIKDKQPK 109
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+ + ENV GL+ K +++ I + Y+V + +L + YGV Q+R RV+I+ ++ G
Sbjct: 110 FFVAENVKGLLSMQKGKVIDMIVKDFESLGYKVDYRLLNAAEYGVPQARERVIIIGNRLG 169
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPY--RSITVRDAISDLPRVSQGANCYLF 357
+ P FP+P H +V N+ + P +IT +AI L V
Sbjct: 170 IENP-FPKPTHKI----------IVDNELNLFPDLPNAITTEEAIGFLSDVELQNGKVAD 218
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
H ++ DG ++++ HI ++ +
Sbjct: 219 H---------IVVDGRKVYN-HIASTKVQDTFFGR------------------------- 243
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSK------GQKNTIIPWSLVHTA 471
K P QH + L+Y + S+ T+K G K+T W
Sbjct: 244 ----KYPVNQHEICDYLRY----------YRDKSNWTTKKIDDYFGYKHTAGHWFRKDNN 289
Query: 472 S----RNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 527
S + ++W + L +D+ +D + +LV R ++ L WD
Sbjct: 290 SGSIPKPSDWWKLKEILKFDDKYDK-------VVTTLVEKPIR---FEQSLRITNWDRPS 339
Query: 528 DTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
DTI T +H + R L+ RE A Q FPD +VF G + +Y+QIGNAVP
Sbjct: 340 DTITATSPE-------IHVNKTRRLSARECAILQTFPDDFVFYGSLNSLYRQIGNAVPVK 392
Query: 588 LAKAIGYEI 596
LA+ I EI
Sbjct: 393 LAEMIASEI 401
>gi|409990103|ref|ZP_11273531.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409939035|gb|EKN80271.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
Length = 451
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 216/503 (42%), Gaps = 75/503 (14%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D P +DLF+G GG+ G G K ++ + +++ A+ N E + +
Sbjct: 3 DRPFLSIDLFAGAGGMTTGFKNQGF-KLLFANDCDQAALATLSHNHPEAMTSSESIESLN 61
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
L+ + ++L +K ++D+++ GPPCQGFS + L++ +N L FL F +
Sbjct: 62 PFELR-----QTLNL-RKGDLDILLGGPPCQGFSTYGKRDPLDQ---RNRLYRYFLKFLE 112
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
F+PK ++ENV G++ +++ I + K+NY V+ L + ++GV Q R RV IL
Sbjct: 113 EFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFIL 172
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGN----LVANKTSHAPYR-SITVRDAISDL---- 345
K+ P H S + + + ++ PY+ +I V +AI DL
Sbjct: 173 GGSNHQKIQP-PSATHEISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEV 231
Query: 346 --PRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
PR++ + Y PP + R ++ + E+L H K + + +R+
Sbjct: 232 LPPRLTHESIPY----PPVSGLSRYQQE------LRSKTGEILH-HSAKRMMGIRRLRLA 280
Query: 404 LIPSFPNADWRDLPNICVKLPRGQHS--YTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
L+ D+ I +L G S ++L + + +C+ + +
Sbjct: 281 LMRP---GDYGT--EISSRLKEGGFSRELIDQLLKGGNGLRDIHECRRQDREKEEKLREI 335
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ + + Q VL +S D G N RL
Sbjct: 336 LQQGHV--------DIQEVL------QSLDSGGFANKYR-------------------RL 362
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
W+ T+V + +HPE DR ++VRE AR Q FPD Y F G +KQIG
Sbjct: 363 DWNAPSHTLVA--HMARDCSDFIHPEFDRFISVRESARLQSFPDRYYFHGSQFQQFKQIG 420
Query: 582 NAVPPPLAKAIGYEIIKCIGNAV 604
NAVPP LA+AI EI +G +
Sbjct: 421 NAVPPKLAEAIASEIGHFLGQTL 443
>gi|194698662|gb|ACF83415.1| unknown [Zea mays]
Length = 163
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 487 DESFDMT-GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
DE ++ GQ +IPW L +TA R+N W+G+ GRL W+ +F T VT P P+ K G H
Sbjct: 36 DEKVKLSNGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFH 95
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
P+QDR++TVRE AR+QGFPDSY F G I + ++QIGNAVPPPLA A+G ++ + +
Sbjct: 96 PDQDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAV 150
>gi|342882968|gb|EGU83532.1| hypothetical protein FOXB_05942 [Fusarium oxysporum Fo5176]
Length = 1335
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 193/492 (39%), Gaps = 107/492 (21%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L+ LDLF G G GL G + W+ + + + +Y AN E S + +
Sbjct: 799 LRGLDLFCGGGNFGRGLEDGGAIEMRWANDFDANAIHTYMANTAGPSEVSPFLGSIDDLQ 858
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ ++G S+P +VD I G PC GFS+L + + LV F S D
Sbjct: 859 RLAIEGEFSD---SVPPIGDVDFISGGSPCPGFSRLTNDKTTAAQRKNQSLVAAFASCVD 915
Query: 235 LFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
L++P+Y +LENV G+V N ++ + ++ + YQ F L + G Q R+RV
Sbjct: 916 LYRPRYGLLENVPGIVQKTANRDQDVFSQLICAIVGLGYQAHFFFLDASACGSPQRRSRV 975
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTIN------GNLVANKTSHA--PYRSITVRDAIS 343
+ + PG++LP P HA ++ G +A + A P+ ++ R + +
Sbjct: 976 FLAFAAPGHRLPHKPYQTHAHPQNTSRLSLGILPTGEPMAERAMPAATPFDFVSARASTA 1035
Query: 344 DLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKI-LSPLMEMRI 402
DLP I+D ++ DH + ++PLM RI
Sbjct: 1036 DLPP---------------------------IYDSKPDICVPYPDHRVSVGITPLMRSRI 1068
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI 462
LIP+ P W + Q Y LK K+ S + +
Sbjct: 1069 HLIPTQP---W--------GMNYAQAWYGRDLK------------KAGSGVMTPSE---- 1101
Query: 463 IPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLA 522
RLA+ E D R N GR
Sbjct: 1102 --------------------RLAFPERTD--------------QGLGRANPNSNAYGRQR 1127
Query: 523 WDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
D F TIV T +P + K G+ LH + R LT+ E RAQGF D V G D YK +G
Sbjct: 1128 PDHLFVTIVKTQSPDDAKNGRTLHWREPRALTIMEARRAQGFRDDEVLLGIPSDQYKIVG 1187
Query: 582 NAVPPPLAKAIG 593
N+V +A ++G
Sbjct: 1188 NSVAREVAVSLG 1199
>gi|110737925|dbj|BAF00900.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 164
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 107/215 (49%), Gaps = 68/215 (31%)
Query: 386 LQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVC 445
L DHICK ++ L +R +LIP+ P ADW DLP K+K ++
Sbjct: 8 LTDHICKAMNELNLIRCKLIPTRPGADWHDLP---------------------KRKVTLS 46
Query: 446 DCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLV 505
D G+ +IP+ L +TA R+N W+G+ GRL
Sbjct: 47 D----------GRVEEMIPFCLPNTAERHNGWKGLYGRL--------------------- 75
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
+WQG +F T VT P P+ K G HPEQ R+LTVRE AR+QGFPD
Sbjct: 76 -------DWQG---------NFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPD 119
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
SY F G I ++QIGNAVPPPLA A+G ++ + +
Sbjct: 120 SYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEAL 154
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 38/269 (14%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAG-VAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ P+ LDLF G G GL + K ++E+ S A + N VI N V
Sbjct: 845 ENPMAVLDLFGGAGAFSLGLKEGSECLKVTHALEISPSAAKTIRRNCAGTQVINQCVNAV 904
Query: 174 LKSLLKGHTQHKG-------------VSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
LK +K H H+ +P+ VDLI AG PCQ S LN + K
Sbjct: 905 LKYAIKKHEGHEVNRPLQLWDSKTPIPEVPRPGSVDLITAGFPCQTHSGLNMFKTANDPK 964
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI---------------LQCIFHCL 265
+ L+ T LS+ D ++PKY+ LENV G + FN + L+ + L
Sbjct: 965 --SSLMLTALSWVDYYRPKYVYLENVAGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRAL 1022
Query: 266 LKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF--SNQLFTI--NG 321
L M YQV + +LQ+G+YG Q R R ++AS+ LP+ PQP H F S++LF NG
Sbjct: 1023 LDMRYQVRYSLLQAGHYGTPQRRIRFFLIASQSTLPLPNLPQPTHDFPQSHKLFITMPNG 1082
Query: 322 NL---VANKTSHAPYRSITVRDAISDLPR 347
++ + AP+ +++ DAI DLP+
Sbjct: 1083 DIIRPIRPGPGTAPHPFVSIEDAIGDLPK 1111
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFP 564
+ + R N G GRL D F TIVT +P+ KQ ++LHP R++TVRE ARAQGFP
Sbjct: 1214 ISSTGRQNFRPGWYGRLDKDSCFPTIVTNIDPMAKQCRVLHPSCKRMVTVRELARAQGFP 1273
Query: 565 DSYV---FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
D +V FRG + M++QIGNAVP PL +A+G E + +
Sbjct: 1274 DWFVFESFRGNVVTMHRQIGNAVPLPLGRALGREFQETL 1312
>gi|402080297|gb|EJT75442.1| modification methylase DdeI [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 166/403 (41%), Gaps = 68/403 (16%)
Query: 27 LFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNE---------HEEKDETIYTEYYR 77
L T+ S+ +S I+ V + +D++ D H +D++ T +
Sbjct: 610 LIYTDDTISMPISWIQGPCTVRIIPSDAAPSTPYDRRGTGNIFYITHRRQDDSTLTPFDD 669
Query: 78 KTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQA 137
+ F Q PLE+ K F TPL+ LDLF+GCG L G+ +
Sbjct: 670 ASIPSTFRQ-GFNPLEMG--------KSF---------TPLRGLDLFAGCGNLGRGIEEG 711
Query: 138 GVAKPCWSVELERSEAASYDANFQECSV-IQDDCNLVLKSLLKGHTQHKGVSLPQKHEVD 196
G + W ++ +Y AN +V + +L+ LKG G S+P K EV+
Sbjct: 712 GAVRVKWVNDIWNVAIHTYMANADPDAVPFLGSVDTMLEKALKGEC---GPSVPAKGEVE 768
Query: 197 LIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKN- 255
I G PCQGFS L + E K LV +F SF D ++PKY ILENV+ +V + N
Sbjct: 769 FISGGSPCQGFSLLTANKSSEAQKKNRSLVASFASFVDFYRPKYGILENVSSMVGKSDNP 828
Query: 256 --EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA-- 311
+ + ++ M YQ+ + + YG QSR+RV ++ + PG LP P H+
Sbjct: 829 GSDYFSQLLCAIVGMGYQIQIILGDAWTYGAPQSRSRVFLIFALPGCTLPERPMMSHSHP 888
Query: 312 -----FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQ 366
FS + N + + ++ +A+ LP
Sbjct: 889 GGTKRFSLGKLSNNEQFSQREFEPTAFSYVSSGEAMKGLP-------------------- 928
Query: 367 RMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
I D + + DH SP+ ++R LIP+ P
Sbjct: 929 -------NIQDGRVRICPGFSDHNSSATSPIEQLRTSLIPTAP 964
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ TTP P + + I HP + R L++ E RAQG PD V G + +K IGN+V
Sbjct: 1011 FATVTTTPQPTDARTAHITHPFEHRTLSILEIRRAQGVPDDEVLVGSFANRWKLIGNSVA 1070
Query: 586 PPLAKAIGYEIIKCI 600
+ A+G E+ + +
Sbjct: 1071 RQASLALGLELRRAM 1085
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 182/421 (43%), Gaps = 78/421 (18%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L ++ ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 488 DCPLKIREFVQEGRKRKILPLP--GDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 545
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 546 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 605
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 606 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQRPSLKKALLLGDA 665
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
SDLP+V Q + + PKT FQR ++ D S + + +LL +
Sbjct: 666 FSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLR 725
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSS 452
+ + E R++ IP A++RDL + V G ++ E D +
Sbjct: 726 LNNDDYE-RVKQIPVKKGANFRDLKGVKV----GANNVVE------------WDPEVERV 768
Query: 453 CTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNN 512
S G K + +++ ++ GRL WDE+ +P
Sbjct: 769 YLSSG-KPLVPDYAMSFIKGKSLK---PFGRLWWDET----------VP----------- 803
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
T+VT P N+ ILHP Q RVLT+RE AR QGFPD Y G
Sbjct: 804 ----------------TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGP 845
Query: 573 I 573
I
Sbjct: 846 I 846
>gi|440475172|gb|ELQ43873.1| modification methylase DdeI [Magnaporthe oryzae Y34]
gi|440487101|gb|ELQ66907.1| modification methylase DdeI [Magnaporthe oryzae P131]
Length = 1289
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 26/275 (9%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLV 173
PL+ LDLF+GCG L G+ + G + W ++ + +Y AN + S ++ +L+
Sbjct: 735 PLRGLDLFAGCGNLGRGIEEGGAVEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVDLL 794
Query: 174 LK-------SLLKGHTQHKGV---SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
L+ S+L G V S+P + EV+ I G PCQGFS L + ++
Sbjct: 795 LEKALKRDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSLLTVNKSDDRQVKNR 854
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSG 280
LV +F SF D ++PKY +LENVT +V+ N + L +F L+ + YQV + +
Sbjct: 855 SLVASFASFVDFYRPKYGLLENVTNMVNANVRPDCDYLSQLFCALVGLGYQVQIILGDAW 914
Query: 281 NYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL------FTINGN-LVANKTSHAPY 333
+YG Q R+R+ + ++ ++LP P H+ + + + NG V + S +
Sbjct: 915 SYGAPQQRSRIFLSFARADFQLPQIPTRSHSHTAAIPSRAIGYLNNGERFVERQFSSTAF 974
Query: 334 RSITVRDAISDLPRVSQGAN-CYLF--HNPPKTHF 365
R +T +AI DLP++ G C F H P K F
Sbjct: 975 RYVTSGEAIDDLPKIGDGRQICIPFPDHRPNKESF 1009
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 507 TASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPD 565
TA R +G RL+ ++ F TI TTPN + + G +HP + R LT+ E RAQG PD
Sbjct: 1050 TAERTRCGRG-WSRLSPNKLFQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPD 1108
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC-IGN 602
+ V G D +K +GN+V A A+G E+ + GN
Sbjct: 1109 NEVLVGQFRDRWKLVGNSVARQAALALGLELRRAYFGN 1146
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 192/493 (38%), Gaps = 109/493 (22%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ LDLF G G GL G + W+ + +Y AN + + +
Sbjct: 823 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDFNEKAMHTYMANTAGPGAVSPFLGSIDELQ 882
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ ++G + ++P +VD I G PC GFS L + + LV F SF D
Sbjct: 883 RLAIQGEFAN---NVPLVGDVDFISGGSPCPGFSLLTNDKTTITQRKNQSLVAAFGSFID 939
Query: 235 LFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
L++P+Y +LENV G+V N ++ + ++ + YQ F L + G Q R RV
Sbjct: 940 LYRPRYGLLENVPGIVQRKSNRDQDVFSQLICAIVGLGYQTHFFFLDASACGSPQRRARV 999
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTIN-GNLVANK-------TSHAPYRSITVRDAIS 343
+ + PG++LP P P HA + GNL + S P+ ++ + A +
Sbjct: 1000 FLAFAAPGHRLPRRPNPTHAHPPHTNSFGLGNLPTGEPMAERIIPSATPFDFVSAQAATA 1059
Query: 344 DLPRV--SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
DLP V S+ C F + H I + L++ +
Sbjct: 1060 DLPPVYDSKPDICIPFPD----------------HRISLGATRGLRN------------K 1091
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
I+LIP+ P N + D K + + +
Sbjct: 1092 IKLIPTRPYG------------------------MNFAQAWYGPDRKKAGTGVLTPAERL 1127
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ P + SR+N W GR D RL
Sbjct: 1128 VFPADSASSLSRSNPWSNAYGRQRPD--------------------------------RL 1155
Query: 522 AWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
+T+VT+ +P + K G+ LH ++DRVLT+ E RAQGF D V G D Y+ +
Sbjct: 1156 -----IETVVTSQSPSDAKNGRTLHWQEDRVLTIMEARRAQGFRDHEVILGSPPDQYRVV 1210
Query: 581 GNAVPPPLAKAIG 593
GN+V +A ++G
Sbjct: 1211 GNSVAREVAVSLG 1223
>gi|389640887|ref|XP_003718076.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
gi|351640629|gb|EHA48492.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
Length = 1294
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 31/280 (11%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ--------- 167
PL+ LDLF+GCG L G+ + G + W ++ + +Y AN + S ++
Sbjct: 735 PLRGLDLFAGCGNLGRGIEEGGAVEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVDLL 794
Query: 168 ------DDCNLVLKSLLKGHTQHKGV---SLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
D +++ S+L G V S+P + EV+ I G PCQGFS L + ++
Sbjct: 795 LEKALKRDGSVLDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSLLTVNKSDDR 854
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFD 275
LV +F SF D ++PKY +LENVT +V+ N + L +F L+ + YQV
Sbjct: 855 QVKNRSLVASFASFVDFYRPKYGLLENVTNMVNANVRPDCDYLSQLFCALVGLGYQVQII 914
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL------FTINGN-LVANKT 328
+ + +YG Q R+R+ + ++ ++LP P H+ + + + NG V +
Sbjct: 915 LGDAWSYGAPQQRSRIFLSFARADFQLPQIPTRSHSHTAAIPSRAIGYLNNGERFVERQF 974
Query: 329 SHAPYRSITVRDAISDLPRVSQGAN-CYLF--HNPPKTHF 365
S +R +T +AI DLP++ G C F H P K F
Sbjct: 975 SSTAFRYVTSGEAIDDLPKIGDGRQICIPFPDHRPNKESF 1014
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 507 TASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPD 565
TA R +G RL+ ++ F TI TTPN + + G +HP + R LT+ E RAQG PD
Sbjct: 1055 TAERTRCGRG-WSRLSPNKLFQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPD 1113
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC-IGN 602
+ V G D +K +GN+V A A+G E+ + GN
Sbjct: 1114 NEVLVGQFRDRWKLVGNSVARQAALALGLELRRAYFGN 1151
>gi|385139885|gb|AFI41915.1| Met1-type cytosine DNA-methyltransferase, partial [Betula
platyphylla]
Length = 169
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 81/126 (64%)
Query: 188 SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVT 247
+LP +VD I GPPCQGFS +NR + SK++ ++ FLSF D F+PKY +LENV
Sbjct: 41 NLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKYFLLENVR 100
Query: 248 GLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQ 307
V FNK + + LL+M YQV F +L++G +GV+QSR R I A+ P LP +P+
Sbjct: 101 NFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPEWPE 160
Query: 308 PLHAFS 313
P+H F+
Sbjct: 161 PMHVFA 166
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K +DLF G GGL GL AG + EL+ S A ++ N ++ D +
Sbjct: 6 MKSIDLFCGAGGLSCGLKMAGF-DTILANELKASHAETFKHNHPNAEMVIGDIRQLCAVD 64
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LKG +++E+DL+ GPPCQGFS R+L+ + N L FL
Sbjct: 65 LKGKLNL------EENELDLVAGGPPCQGFSVNAPIRDLDDER--NHLFKDFLRIAFELM 116
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK I++ENV G+V K +++ I+ L Y+V +L +G+YGV Q R R +I+A K
Sbjct: 117 PKAILIENVPGIVSLGKGTVVKQIYKELESRGYRVEHRILYAGHYGVPQLRFRTIIIAVK 176
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKT---------SHAPYRSITVRDAISDLPRV 348
K FPQP + T N K + + TV DA+SDLP +
Sbjct: 177 GREKEIYFPQPQYN-----STARANFAGAKELCLKLLPLFASELKKQTTVWDALSDLPPI 231
Query: 349 SQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G+ L + PP+ +Q+ ++ S + + +H C L P+ R++ IP
Sbjct: 232 ESGSVNTLMNYEAPPQGEYQKYLRKNS----------DKVTNHSCNGLGPVNLERLKHIP 281
Query: 407 SFPNADWRDLP 417
WRD+P
Sbjct: 282 Q--GGSWRDIP 290
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 500 IPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
IP+ ++ +R ++ GRL+ D TI+T +P G HP QDRV++VRE
Sbjct: 289 IPFDMLPKGLQRARRSDHTKRYGRLSPDSLCSTILTKCDP--HWGSFFHPIQDRVISVRE 346
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
AR Q FPD Y F G + + Y+Q+GNAVPP +A+AIG EI K I ++
Sbjct: 347 AARIQSFPDDYSFLGSLQEQYEQVGNAVPPLMARAIGEEIRKMIQESI 394
>gi|402224965|gb|EJU05027.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax
sp. DJM-731 SS1]
Length = 470
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 110/219 (50%), Gaps = 28/219 (12%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PLKCL LF G GGL GL QAG W+++ S + NF + + I D N VL+
Sbjct: 233 PLKCLALFHGAGGLSLGLEQAGCIVTKWAIDAYPSAHVTLKTNFPDVAAILQDTNAVLRR 292
Query: 177 LLK-GHTQH------------KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
++ +H + LP+ EVD+I+ GPPCQGFS+LN S +N
Sbjct: 293 AIELAEGKHPPPLFQLNSKTERCPDLPRPGEVDIIIGGPPCQGFSRLNPFASALDS--RN 350
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFN-------------KNEILQCIFHCLLKMNY 270
L+ LS+ D P++++LENV L+ + +N + I L++ Y
Sbjct: 351 SLIGNALSYVDFLHPRFVLLENVPPLLKMSSTVRDETGDEEHIENAFAKLIVSFLVQRGY 410
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPL 309
QV F VLQ+G +G Q R+R + A+ G LP FP PL
Sbjct: 411 QVRFKVLQAGQHGAPQGRSRAIFWAAWHGEVLPDFPFPL 449
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 125/263 (47%), Gaps = 37/263 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ D F+G G + G K ++E+ S AA+ N +V N+VL+
Sbjct: 775 LRGFDPFAGVGAFGLPMEATGCIKITHAIEISPSAAATMQKNSPHTTVYNQCSNIVLRYA 834
Query: 178 LKGHTQH----------KGVSLP---QKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+K + + +LP + ++D IVAG PCQ S LN ++ + K+
Sbjct: 835 VKSRAKQWEGSPPLDIQERAALPDPPKPGDIDCIVAGFPCQPHSTLNMFQK--ANDRKSH 892
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI---------------LQCIFHCLLKMN 269
L+ LS+ D QPKY + ENV G +++N N L+ H LL +
Sbjct: 893 LLLNLLSWIDYLQPKYCVFENVRGFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALLTLG 952
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN----QLFTING---N 322
YQV F +LQ+G YG Q R R +LAS+ Y LPSFP P HA N + NG N
Sbjct: 953 YQVHFSLLQAGQYGTPQRRVRFFLLASQKSYPLPSFPLPTHAVLNPDALSIRFPNGVEIN 1012
Query: 323 LVANKTSHAPYRSITVRDAISDL 345
V AP+R++ +RDAI DL
Sbjct: 1013 PVPTGDGTAPFRAVCIRDAIDDL 1035
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG---G 572
G+ GRL E F T VT +P KQ +LHP+ R+ T+RE AR+QGFPD + F
Sbjct: 1145 GMYGRLDEKEWFHTTVTNVDPTAKQSYVLHPKYRRIFTIRELARSQGFPDWFTFIAHGDR 1204
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ +++QIGNAVP + +A+G E+ + +
Sbjct: 1205 MKTLHRQIGNAVPWQVGEALGRELERAM 1232
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 43/313 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K +DLF+G GGL G AG C +++++ A+Y N+ +I D + S L
Sbjct: 4 KVIDLFAGAGGLTTGFHMAGFESLC-AIDVDAKPLATYKHNYPNTKIIHQDIRKINPSDL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + L Q+ E+ ++ GPPCQGFS+ A + +N L TFL F + F+P
Sbjct: 63 R-----LALGL-QREELTALIGGPPCQGFSRNIPAGYRYLNDSRNQLYRTFLEFVEEFRP 116
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
Y+++ENV ++ I + I L ++Y+V L + +YG+ Q+R+R +AS
Sbjct: 117 IYVVMENVPEILKAYNGVIREEITQQLESLSYKVVSSSLNAAHYGIPQTRSRAFFIASLD 176
Query: 299 GYKLPSFPQPLH-----------AFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
Y FP+P H NQL NL+ S +TVRDAI DLP
Sbjct: 177 HYL--HFPKPTHFGDIRSDYRTRKSCNQL-----NLLETNVSPL----VTVRDAIGDLPP 225
Query: 348 VSQGA--NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
+ G ++ + P+T +Q M+++ S + +H+ + L+P+ R+RL+
Sbjct: 226 LEAGQKYEAEVYPSAPQTTYQAMIRNQS----------VKVVNHVARALTPIQLSRVRLL 275
Query: 406 PSFPNADWRDLPN 418
D RDLP
Sbjct: 276 TE--GQDARDLPT 286
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 514 WQGVLGRLAWDESFDTI---VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G GRL WD+ TI V P G+ HP QDR +T+RE AR +PD++ F
Sbjct: 294 YSGAYGRLYWDKPARTITRWVFHPG----SGRFFHPTQDRTITIREAARLHSYPDNFHFL 349
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
G DM QIG +VPP L+K I I++
Sbjct: 350 GTYTDMASQIGESVPPFLSKVIALSILQA 378
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 128/243 (52%), Gaps = 19/243 (7%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ +++ G GGL GL +G + ++++ + ++ + + V D L+
Sbjct: 309 PLRGMEIMCGAGGLTLGLDLSGACETTFAMDADAHAVETFRRHHPQAKVSCVDAGDALQQ 368
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR--ARELEKSKLKNGLVFTFLSFCD 234
+ + ++ +LP+ +VD+I AGPPCQGFS+ N+ AR+ + +N LV T L + +
Sbjct: 369 AMSPNAEN---ALPRPGDVDVIAAGPPCQGFSRKNQTAARDAAEKDPRNLLVCTVLGWVE 425
Query: 235 LFQPKYIILENVTGL----VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
QPKY ILENV G + + +++ + LLK+ Y T+ +QSG YG AQSR R
Sbjct: 426 HLQPKYFILENVEGFTASKLGGHDQGMVKLVLAVLLKIGYAATWGFVQSGAYGCAQSRGR 485
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTING----NLVANKTSHAPYR----SITVRDAI 342
++LA+K LP PQP H F + + +G + TS P +++V D I
Sbjct: 486 FILLAAKQELTLPKLPQPTHDFQGR--SSSGFWWSDASGQHTSRVPSMPILPALSVADTI 543
Query: 343 SDL 345
DL
Sbjct: 544 DDL 546
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM--- 576
RL D F + T + +G +LHP Q R+LTVRE ARAQGFPD F CD
Sbjct: 672 RLDSDGYFKILTTK---VRGEGSMLHPTQRRLLTVRECARAQGFPDWVDF---ACDTNLQ 725
Query: 577 --YKQIGNAVPPPLAKAIGYEIIKC 599
YKQIGNAVP PL AIG I+
Sbjct: 726 EAYKQIGNAVPVPLGVAIGRSIVTA 750
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 177/494 (35%), Gaps = 103/494 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LDLF GCG L GL AGV + W+ ++ + AN ++ + L
Sbjct: 653 LRALDLFCGCGSLGRGLEDAGVVETRWANDIWDRAIHTLMANRATADAVEPFLGSADELL 712
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ ++P EVDLI G PCQGFS L + K +V +F S DL++
Sbjct: 713 ARALQGRYSRAVPAPGEVDLISGGSPCQGFSVLTSDKAAPKQYKNRSMVASFASMVDLYR 772
Query: 238 PKYIILENVTGLVHF--------NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
P Y +LENV V ++ +I + L+ + YQV + + YG QSR
Sbjct: 773 PLYGVLENVPAFVARQPRQQDKNHREDIFGQLLCALVGLGYQVAVHLGNAWAYGAPQSRQ 832
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTI-------NGNLVANKTSHAPYRSITVRDAI 342
RV +L + P +LP FP P H + NG+ +A D
Sbjct: 833 RVFLLFAAPAVRLPVFPLPSHGSPSDFHATTAVGGLANGDCIAEAW-----------DGP 881
Query: 343 SDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
+ P VS G P D H H +C S M ++I
Sbjct: 882 TAFPFVSIGRATADLQIGPAACVDDGFVDVCIPHPDH---------RVCADTSDQMRLQI 932
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI 462
+P FP + +PR E + + D ++ T+ K +
Sbjct: 933 AYVPPFP---------FGMNVPRAMARRHEDPATSPSLRVLFTDHVLAAKMTTNAYKR-V 982
Query: 463 IPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLA 522
P L+ T + N N + W G + L
Sbjct: 983 DPTRLLATVTTNCN---------------------------------AADGWTGAV--LH 1007
Query: 523 WDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGN 582
W PL VL VR RAQG PD V G D +K +GN
Sbjct: 1008 WRHR--------RPLT------------VLEVR---RAQGMPDDDVLVGSPKDQWKMVGN 1044
Query: 583 AVPPPLAKAIGYEI 596
AV PLA AIG +
Sbjct: 1045 AVARPLAMAIGLAV 1058
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 144/314 (45%), Gaps = 35/314 (11%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT 182
+F+G GGL EGL +AG ++ E+ A +Y AN V D V ++
Sbjct: 1 MFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYAANHPATQVDSRDIRKVDARKIRNLL 59
Query: 183 QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYII 242
K + E+DLI GPPCQGFS R E S+ N L +L F FQP+ ++
Sbjct: 60 GLK------RGELDLIAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFVTEFQPRAVL 111
Query: 243 LENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKL 302
+ENV G+V F L I L ++ Y +L + +YGV Q+R R +IL S+ G
Sbjct: 112 IENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGIDP 171
Query: 303 PS-FPQPLHA------FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ---GA 352
+ FP+PL F++Q NLV S +TV+DAI DLP + G
Sbjct: 172 TALFPEPLRQAPVRVNFTSQF--AGKNLVNLPRSLELPSHVTVKDAIGDLPVLRNGEIGE 229
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ +P +Q++M+ GS H R LS + R+ IP P +
Sbjct: 230 PVKDYRHPVDNPYQQLMRVGSTGVTCHEAAR----------LSKINLERMAHIP--PGGN 277
Query: 413 WRDLPNICVKLPRG 426
W D+P LPRG
Sbjct: 278 WTDIPEAL--LPRG 289
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 498 TIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T IP +L+ +R ++ GR+ D TI+T +P G H EQDR TV
Sbjct: 279 TDIPEALLPRGMRMARRSDHTKRYGRVNPDGLASTILTKCDP--HWGAYFHYEQDRAFTV 336
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
RE AR Q FPD+YVF G + Y+Q+GNAVPP L A+G I +GN P
Sbjct: 337 REAARIQSFPDTYVFCGSRVEQYEQVGNAVPPLLGAAVGRAIANVLGNVRKP 388
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 165/370 (44%), Gaps = 82/370 (22%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ D F G G GL ++G K +VE+ S A + N + +V N +L+
Sbjct: 732 PLRAFDPFGGSGAFGLGLEESGCIKVTHAVEISPSAARTMKRNCPDTTVYNQCANKILQW 791
Query: 177 LLKGH---------TQHKGVSLP---QKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+K H T +LP + ++D IVAG PCQ S+LN ++ + LK+
Sbjct: 792 AIKKHEGLPVDRLKTIDNNKNLPPPLRPGDIDCIVAGFPCQPHSRLNMYQK--ANDLKSN 849
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFN-------KNEI--------LQCIFHCLLKMN 269
L+ LS+ D QP+Y I ENV G + +N ++++ L+ + ++ M
Sbjct: 850 LILNVLSWIDFLQPRYCIFENVRGFLQYNLKAHQVDEHKVAGGIEMGGLKFVMRVMIAMG 909
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF----SNQLFTINGNLV- 324
YQV +LQ+ +YG Q+R R ++ASK GY LP PQP H F S ++ NG+ V
Sbjct: 910 YQVRVGLLQAAHYGTPQTRVRFFLVASKHGYPLPELPQPSHDFPLVDSLEIKFPNGHYVR 969
Query: 325 ----ANKTSHAPYRSITVRDAISDLPRVS---------------------------QGAN 353
N T AP+ +++ DAI DLP Q A
Sbjct: 970 PIKFMNGT--APHSYVSIDDAIHDLPLFDWSNPDRAGRSRQDPETRDDIKQVKCDKQKAW 1027
Query: 354 CYL-----FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
C L + + P+T FQ + E LQ + L P+ R+R IP
Sbjct: 1028 CGLRGQAVYRHEPRTAFQLWCRRKP---------TEDLQQYTRTYL-PIKVKRVRSIPLK 1077
Query: 409 PNADWRDLPN 418
AD+RD+P+
Sbjct: 1078 AKADYRDMPS 1087
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+R+ G+ GRL F T VT +P KQ ++L+P R++TVRE AR+QGFPD +
Sbjct: 1102 ARSGFRPGLYGRLDRSLWFQTTVTNVDPTAKQCRVLNPYCMRIVTVRELARSQGFPDYFT 1161
Query: 569 FRG---GICDMYKQIGNAVPPPLAKAIGYEI 596
F + M++QIGNAVP P++ A+G E+
Sbjct: 1162 FYADGDNVITMHRQIGNAVPWPVSLALGREL 1192
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP+ +VD+I GPPCQG S NR R ++ S +N + F+ +PKY+++ENV
Sbjct: 1401 LPRPGDVDVICGGPPCQGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENV 1460
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ +K + + L+ M YQ ++ +G YG+ Q R RV + + PG LP FP
Sbjct: 1461 VDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGCYGLPQFRLRVFLWGAHPGESLPQFP 1520
Query: 307 QPLHAFSNQLF---TINGNLVANKTSHAP--YRSITVRDAISDLPRVS--QGANCYLFHN 359
P H + + N+VA +++ +RDAISDLP V+ + + L+
Sbjct: 1521 LPTHDVVAKYWPPSEFECNIVAYDEGQPRELEKAVVLRDAISDLPAVTNYETRDEMLYGK 1580
Query: 360 PPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
PP+T FQ+ ++ GS I +L DH L+ +RI IP A++
Sbjct: 1581 PPETEFQKYIRSTKDAMAGSSSSGITKGYNSILYDHRPYPLNEDNYLRICQIPRRKGANF 1640
Query: 414 RDLPNICV 421
RDL + V
Sbjct: 1641 RDLSGVIV 1648
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T++T P N+ ILHPEQDRVLT+RE AR QGFPD Y FRG + + Y
Sbjct: 1688 FARLWWDETVPTVLTFPYLRNQA--ILHPEQDRVLTIRECARLQGFPDYYRFRGTVKERY 1745
Query: 578 KQIGNAVPPPLAKAIGY 594
QIGNAV P+A+A+GY
Sbjct: 1746 CQIGNAVAFPVARALGY 1762
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 33/181 (18%)
Query: 4 HVQWLVRPNDTILGDKI-QFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEE----E 58
VQW R DT++ ++ D +F + L I V V +T S +
Sbjct: 1114 RVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSLKLDSIP 1173
Query: 59 ILDNEHEEKDETIYTEYYRKTKDKHFVQPN--ARPLELAYILKIIHSKEFLPKFPMPLD- 115
D ++ K Y+ ++ K + PN PL +A FP +D
Sbjct: 1174 PFDYYYDMKYNVEYSTFHTLLSGK--ISPNCIETPLSVANT-----------TFPEDMDG 1220
Query: 116 -----TPLKCLDLFSGCGGLMEGLCQAGVAKPC------WSVELERSEAASYDANFQECS 164
L LDL+SGCGG+ GLC G C W+++ ++S S N E
Sbjct: 1221 CKPDKAELALLDLYSGCGGMSTGLC-LGAKLSCVNLVTKWALDFDKSACESLKLNHPETQ 1279
Query: 165 V 165
V
Sbjct: 1280 V 1280
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 27/253 (10%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D P + L+LFSGCGGL L + + W+VE ++S A + C V D N L
Sbjct: 263 DEPFRGLELFSGCGGLATALDEV-FCQTSWAVERDKSAALTLSKMHPNCVVHTADVNDAL 321
Query: 175 KSLLKGHTQHKGVSLPQKHE-VDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+++++ + P + E + ++ GPPCQGFS LNR R S +N L LS+
Sbjct: 322 RTIIRTGS---AAGFPDRDESIGVLFGGPPCQGFSTLNRHRS--PSDERNLLFANMLSWV 376
Query: 234 DLFQPKYIILENVTGLVHFN---------------KNEILQCIFHCLLKMNYQVTFDVLQ 278
D+++P Y +LENV G++ + ++ I L + YQ LQ
Sbjct: 377 DVYRPTYFLLENVGGMLSIKLRLELAEKDHPAVDVEFGTVKLIVRVLAALGYQARVHYLQ 436
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING-----NLVANKTSHAPY 333
+G YG QSR+R+VI + G +LP P HAF + L+ +
Sbjct: 437 AGMYGAPQSRHRLVIFGCRLGTELPIAPHATHAFQGRTKATKRLPGGLQLLLRPEPGCAF 496
Query: 334 RSITVRDAISDLP 346
+ +++ DAI DLP
Sbjct: 497 QGVSLGDAIGDLP 509
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFR--GGICDMYKQIGNAVPPPLAKAIGYEI 596
G++LHP Q+R LTVRE AR QGFPD Y F + + YKQIGNAVP PL A+ I
Sbjct: 647 GQVLHPTQNRCLTVREAARIQGFPDWYEFSPTDKLPECYKQIGNAVPLPLGTALARAI 704
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 36/308 (11%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LDLF+G GGL GL AG + ++ EL A +Y N ++ D + +S L
Sbjct: 8 LDLFAGAGGLTCGLDMAGF-QSIFANELVPVYAETYSKNHPNAEMVVGDIRAIAESNLM- 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
K + L + E+DL+ GPPCQGFS R L+ ++ N L +L ++ +PK
Sbjct: 66 ----KSLGL-KAGELDLLAGGPPCQGFSINAPIRTLDDTR--NHLFKDYLRVAEVLKPKA 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I++ENV G+V K +++ I+ L +M Y V +L +G+YGV Q R R + +A
Sbjct: 119 ILIENVPGIVSLGKGTVVEQIYKELNRMGYSVAHKILFAGHYGVPQMRFRTIFIAIYGHG 178
Query: 301 KLPSFPQPLH--------AFSNQL-FTINGNLVANKTSHAPYRSITVRDAISDLPRVS-- 349
K SFP+P + A S +L F + H TV DAISDLP ++
Sbjct: 179 KSISFPEPEYNAKAVANFAGSKELCFQVPPLFADQLIPHT-----TVWDAISDLPPITGG 233
Query: 350 QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
G+N ++ + PK+ +Q++++ S ++ +H C L + R++ IP
Sbjct: 234 NGSNESVYLSQPKSDYQKVLRQDS---------PNIIYNHECAKLGKVNLDRLKHIPQ-- 282
Query: 410 NADWRDLP 417
WRD+P
Sbjct: 283 GGSWRDIP 290
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 500 IPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
IP+ L+ +R ++ GRL D TI+T +P G HP QDRVL+VRE
Sbjct: 289 IPFELLPDGLKRARRSDHTKRYGRLHPDGLCSTILTKCDP--HWGSFFHPTQDRVLSVRE 346
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
AR Q FPDSYVF+G + Y+Q+GNAVPP +A+AIG EI K IG
Sbjct: 347 AARIQSFPDSYVFKGNLTQQYEQVGNAVPPLMARAIGLEIAKMIG 391
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP+ +VD+I GPPCQG S NR R ++ S +N + F+ +PKY+++ENV
Sbjct: 341 LPRPGDVDVICGGPPCQGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENV 400
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ +K + + L+ M YQ ++ +G YG+ Q R RV + + PG LP FP
Sbjct: 401 VDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGCYGLPQFRLRVFLWGAHPGESLPQFP 460
Query: 307 QPLHAFSNQLF---TINGNLVANKTSHAP--YRSITVRDAISDLPRVS--QGANCYLFHN 359
P H + + N+VA +++ +RDAISDLP V+ + + L+
Sbjct: 461 LPTHDVVAKYWPPSEFECNIVAYDEGQPRELEKAVVLRDAISDLPAVTNYETRDEMLYGK 520
Query: 360 PPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
PP+T FQ+ ++ GS I +L DH L+ +RI IP A++
Sbjct: 521 PPETEFQKYIRSTKDAMAGSSSSGITKGYNSILYDHRPYPLNEDNYLRICQIPRRKGANF 580
Query: 414 RDLPNICV 421
RDL + V
Sbjct: 581 RDLSGVIV 588
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T++T P N+ ILHPEQDRVLT+RE AR QGFPD Y FRG + + Y
Sbjct: 628 FARLWWDETVPTVLTFPYLRNQA--ILHPEQDRVLTIRECARLQGFPDYYRFRGTVKERY 685
Query: 578 KQIGNAVPPPLAKAIGY 594
QIGNAV P+A+A+GY
Sbjct: 686 CQIGNAVAFPVARALGY 702
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 33/183 (18%)
Query: 4 HVQWLVRPNDTILGDKI-QFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEE----E 58
VQW R DT++ ++ D +F + L I V V +T S +
Sbjct: 50 RVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSLKLDSIP 109
Query: 59 ILDNEHEEKDETIYTEYYR--KTKDKHFVQPNA--RPLELAYILKIIHSKEFLPKFPMPL 114
D ++ K Y+ ++ K V PN PL +A FP +
Sbjct: 110 PFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCIETPLSVANT-----------TFPEDM 158
Query: 115 D------TPLKCLDLFSGCGGLMEGLCQAGVAKPC------WSVELERSEAASYDANFQE 162
D L LDL+SGCGG+ GLC G C W+++ ++S S N E
Sbjct: 159 DGCKPDKAELALLDLYSGCGGMSTGLC-LGAKLSCVNLVTKWALDFDKSACESLKLNHPE 217
Query: 163 CSV 165
V
Sbjct: 218 TQV 220
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 193/483 (39%), Gaps = 89/483 (18%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L L LFSG GG+ G AG W+ + ++ +Y N V+ D
Sbjct: 4 LNLLSLFSGAGGMDLGFKNAGF-NILWANDFQKDAVETYKNNIGNHIVLGD--------- 53
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
T+ +P ++D+++ G PCQGFS N R +E + N L L Q
Sbjct: 54 ---ITKIDSSEIPGT-DIDVVIGGFPCQGFSIANVKRNMEDHR--NFLYLELLRVIKDKQ 107
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV GL+ K +++ I + Y+V + +L + YGV Q+R RV+I+ ++
Sbjct: 108 PKFFVAENVKGLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQARERVIIIGNR 167
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G P FP+P H ++ N+ P + DAI+ + A+ L
Sbjct: 168 IGIDNP-FPKPTHKIPDE----------NELDLFP----ELPDAITTEEAIGFLADVELQ 212
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
+ H ++ DG +I+ +HI ++ +F
Sbjct: 213 NGKIADH---IVVDGRKIY-----------NHIAS---------TKVEDTF--------- 240
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS----R 473
K QH + L+Y K D + G K+T W S +
Sbjct: 241 -FGRKYQVNQHEICDYLRYYRDK----SDWTTKKIDDYFGYKHTAGHWFRKDNNSGSIPK 295
Query: 474 NNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTT 533
++W + L +D+ +D P + R NW D DTI T
Sbjct: 296 PSDWWKLKEILKFDDKYDKVVTTFVEKPIRF-EQSLRITNW---------DRPSDTITAT 345
Query: 534 PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+H + R L+ RE A Q FPD +VF G + +Y+QIGNAVP LA+ I
Sbjct: 346 SPE-------IHVNKTRRLSARECAILQTFPDDFVFYGSLNSLYRQIGNAVPVKLAEMIA 398
Query: 594 YEI 596
EI
Sbjct: 399 SEI 401
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 26/264 (9%)
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCD 234
+++GH Q LP+ +VD++ GPPCQG S NR RE E KN + F+
Sbjct: 373 VIEGHRQR---ILPRPGDVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQ 429
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+PKY+ +ENV ++ F + + L+ M+YQ ++ +G YG+ Q R RV +L
Sbjct: 430 FLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLL 489
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTING-------NLVA--NKTSHAPYRSITVRDAISDL 345
KLP FP P H + NG NLV N T R I + D +SDL
Sbjct: 490 GCHSKEKLPPFPLPTH----EAIVKNGCPLAFERNLVGWPNDTPMQLARPIVLEDILSDL 545
Query: 346 PRVSQGA--NCYLFHNPPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPL 397
P V+ G + L+ P+T FQR ++ G R H + L DH +L
Sbjct: 546 PEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSKSSKLYDHRPLVLDND 605
Query: 398 MEMRIRLIPSFPNADWRDLPNICV 421
RI IP A++RDL + V
Sbjct: 606 NYQRILQIPKRKGANFRDLSGVIV 629
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ WDE T++T PN + ++HP QDR+LT+RE AR QGFPD+Y FRG + D Y
Sbjct: 669 FGRVWWDEVVGTVLTVPNA--RMQALIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRY 726
Query: 578 KQIGNAVPPPLAKAIGYEI 596
+QIGNAV P+ +A+GY +
Sbjct: 727 RQIGNAVAVPVGRALGYAL 745
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 25/252 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK D F G G G+ ++G K +VE+ S A + N + I+ +++
Sbjct: 767 LKAFDPFGGVGAFGLGMEESGCVKMVHAVEISPSAARTLQNNSPNYA-IKTHAGHQVEAP 825
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + P+ ++D IVAG PCQ S+LN + + K+ L+ LS+ D +
Sbjct: 826 ETISRRGQLPDPPKPGQIDCIVAGFPCQPHSRLNMFQR--ANDRKSHLILNLLSWIDFLR 883
Query: 238 PKYIILENVTGLVHFNKNEI---------------LQCIFHCLLKMNYQVTFDVLQSGNY 282
PKY LENV G + ++ N L+ + H LL MNYQV +LQ+ +Y
Sbjct: 884 PKYCFLENVRGFLSYSLNATQAGRYRVEGGIAMGGLKFVIHALLAMNYQVRMGLLQAAHY 943
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ----LFTINGNL---VANKTSHAPYRS 335
G Q+R R ++A++ Y LPS PQP H+F + L NG + V + AP++
Sbjct: 944 GTPQTRVRFFLIAARHSYLLPSMPQPTHSFPVKDALALKLTNGGMALPVLTGSGLAPFKY 1003
Query: 336 ITVRDAISDLPR 347
I++ DAISDLPR
Sbjct: 1004 ISIDDAISDLPR 1015
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 491 DMTGQKNTIIPWSLVHTAS---RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPE 547
D T + + W + S R+ G+ GRL +E F T VT P KQ ++L+P
Sbjct: 1082 DYTRLREELWEWQFSNPTSAVARDGFRAGLYGRLDKNEWFQTTVTNVEPTAKQSRVLNPY 1141
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICD---MYKQIGNAVPPPLAKAIGYEI 596
RV+TVRE AR+QGFPD +VF D M++QIGNAVP P+ A+G E+
Sbjct: 1142 CKRVVTVRELARSQGFPDHFVFYAENSDVKTMHRQIGNAVPWPVGAALGREL 1193
>gi|220909632|ref|YP_002484943.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
gi|219866243|gb|ACL46582.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
Length = 359
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 158/402 (39%), Gaps = 124/402 (30%)
Query: 197 LIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE 256
+++A PPC GFSQ N L +N LV F F P+++++ENV L+ +
Sbjct: 75 VLIACPPCTGFSQKNSKNHLNDDP-RNRLVVRTADFVAEFLPEFLVMENVKELLQGKQKH 133
Query: 257 ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL 316
+ L ++Y V V YG+ Q R+R +ILA + G K+ SF QL
Sbjct: 134 HFLKLREHLEALDYSVFSQVHDLSKYGLPQRRDRALILAWRKG-KVNSF---------QL 183
Query: 317 FTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIH 376
+ R TVRD IS LP + GA
Sbjct: 184 EAVQ-------------RKFTVRDTISHLPPLKAGA------------------------ 206
Query: 377 DIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY 436
I+ + + H+C +SP + RIR IP W D+ N
Sbjct: 207 ---IDPNDKM--HVCPSVSPTVLNRIRAIPK-DGGSWGDVMN------------------ 242
Query: 437 NAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQK 496
+ + +K +IP S+ +T R ++ V GRL WDE
Sbjct: 243 -------------DPNLSDNEKKQLLIP-SMFNTKRRKGSFPDVYGRLKWDE-------- 280
Query: 497 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
L T +R G G+ HPEQDR+LTVRE
Sbjct: 281 -------LAATITRECGHVG-----------------------NGRYTHPEQDRLLTVRE 310
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
A QGFP Y+F G + Y+QIG+AVPP +A+ I Y +I+
Sbjct: 311 MALLQGFPKEYIFEGALSAKYRQIGDAVPPIIAEQIAYRLIQ 352
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 147/320 (45%), Gaps = 37/320 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LDLF+G GGL EGL +AG ++ E+ A +Y N V D V
Sbjct: 16 LTSLDLFAGAGGLSEGLREAGFTS-LYANEISPRYAQTYAVNHPGTIVESRDIREV---- 70
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
H + L ++ E+DLI GPPCQGFS R E S+ N L +L F FQ
Sbjct: 71 -DAHKIRNLLGL-KRGELDLIAGGPPCQGFSINAPKRSTEDSR--NHLFREYLRFVSEFQ 126
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ +++ENV G+V F L I L + Y+ +L + +YG+ Q+R R +IL +
Sbjct: 127 PRAVLIENVPGMVSFEGGATLDAILESLKNLGYEADVRILYAPHYGIPQTRWRTIILGCR 186
Query: 298 PGYKLPS--FPQPLHA------FSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
G P+ FP+PL F++Q NLV S +TVRDAI DLP +
Sbjct: 187 DGLN-PTELFPEPLRQAPVRVNFTSQFG--GKNLVNLPISLELPSHVTVRDAIGDLPSLC 243
Query: 350 Q---GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G + + +Q++M+ GS + + H LS + R+ IP
Sbjct: 244 NGEIGEQVKSYRHSADNQYQKLMRIGS----------DGVTCHEAARLSKINLERMAHIP 293
Query: 407 SFPNADWRDLPNICVKLPRG 426
+W ++P+ LPRG
Sbjct: 294 Q--GGNWTNIPDEL--LPRG 309
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+R ++ GR+ D TI+T +P G H EQDR TVRE AR Q FPD+Y
Sbjct: 313 ARRSDHTKRYGRVHPDGLASTILTKCDP--HWGAYFHYEQDRTFTVREAARLQSFPDTYT 370
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
F G + Y+Q+GNAVPP L A+G I + +GN+
Sbjct: 371 FCGSRVEQYEQVGNAVPPLLGAAVGRTIARALGNS 405
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 50/278 (17%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
T ++ LD+FSG GGL +GL +GV +P ++++ + + +Y NF S I D N+ L
Sbjct: 727 TRMRMLDMFSGAGGLSQGLVLSGVCEPKYAIDHDAAALETYKQNFPGVSAIHQDVNVALS 786
Query: 176 SLL----KGH--------TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
L GH + + +LP +++VD I AGPPCQ FS NR R + + +
Sbjct: 787 DTLVASVAGHDRAPTPSDSDSEDSTLPGRYDVDFICAGPPCQSFSGANRFR--KDTDPRT 844
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLV------------------------HFNKNEILQ 259
++ ++ D ++PKY ++ENV + ++ + IL+
Sbjct: 845 TMIIAVMAAVDHYRPKYFLVENVPNALTNRILGPSARGRSSDSAETDFHEDNYVEQGILR 904
Query: 260 CIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI 319
I L + Y + +LQ+ +G Q R R I+ ++ G+ LP+FP P + +
Sbjct: 905 FITRAALDLGYAIRVGILQASEHGAPQHRRRAFIMGARHGHTLPNFPLPSYCVPKPETGL 964
Query: 320 N------GNLVANKTSHAP------YRSITVRDAISDL 345
G+ K + P +R +T+ DAISDL
Sbjct: 965 RLPSSRYGDPTHQKDGNVPIVGNGIHRRVTMWDAISDL 1002
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPE-------QDRVLTVREYARAQGFPDS 566
+QG GR F TI+T+ P K G +HP+ Q R+LT+RE ARAQGFPD
Sbjct: 1131 YQGAFGRYDKKAPFATILTSLRPAKKNGFCIHPDVGGFTLAQKRMLTMRELARAQGFPDH 1190
Query: 567 YVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ F G + + +QIGNAV +++AIG EI K I
Sbjct: 1191 FRFHGTVEQVNRQIGNAVVIQVSRAIGLEIKKAI 1224
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 172/392 (43%), Gaps = 61/392 (15%)
Query: 1 MKAHVQWLVRPNDT--ILGDKIQFDNST-LFLTNACESIDLSVIKKTVCVDFVTNDSSEE 57
++ V++L R NDT + +K DN LFLT + + V F+ D
Sbjct: 751 IQIRVRYLERYNDTPQMEKEKKMMDNERHLFLTFRIGEVQPDQLDGKCFVQFLEEDG--- 807
Query: 58 EILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSK-EFLPKFPMPLD- 115
E + T + +++ + H V + + + K + ++ E L + +
Sbjct: 808 -------EIYEWTKHNDHFFLNQKGHSVLFDIEAGDFDFCEKCVKTRREELARAEQLFEH 860
Query: 116 -TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
PL+ L+LFSG GG G+ + + W+VE A +Y N V D + +L
Sbjct: 861 NGPLRGLELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLL 920
Query: 175 KSLLKGHTQHKGVS--------------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSK 220
+ + +H+G + +P + EVD I GPPCQ FS N R+ +
Sbjct: 921 QHTID---EHQGKNPPPLQSNDNKICPPMPNRGEVDFIFGGPPCQSFSGANHHRQADD-- 975
Query: 221 LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KNEILQCIFHCLL 266
+++ + LSF + + Y +LENV GL ++ K+ +++ I CL+
Sbjct: 976 IRSTMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLV 1035
Query: 267 KMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS----NQLFTINGN 322
+ QV + VLQ+G YG Q+R RV+ A+K G LP P PL+A+ + L
Sbjct: 1036 ALGRQVQWKVLQAGQYGAPQNRERVIFWAAKRGLVLPKHPVPLYAWKRGAMSSLLPTGTK 1095
Query: 323 LVANKTS--------HAPYRSITVRDAISDLP 346
L S +AP ITV+ AI DLP
Sbjct: 1096 LPPPTRSLVPGVCHQYAPLPPITVKTAIGDLP 1127
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG------ 572
GRL+ D F +T P K + LHP+Q R++TVRE AR+QGFPD+YVF
Sbjct: 1254 GRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVTVRELARSQGFPDNYVFETTGSGSAI 1313
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
D +QIGNAVP P+A A+G E+
Sbjct: 1314 FYDQIRQIGNAVPVPMALALGKEL 1337
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 18/262 (6%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
T LK +DLF G GG +G + G + + +++ A++ N + + D V +
Sbjct: 2 TSLKVMDLFCGTGGFSKGFEKTGSFEVVYGIDILPLSVATFQLNHEAALALSGDIRKVRR 61
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
S + + ++L + EVD+I+ GPPCQGFS + R +N L F ++
Sbjct: 62 SEIA-----EKLNL-ARDEVDVIIGGPPCQGFSSIRPNRSTNYDDPRNTLFEEFAAYVGY 115
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
++P+ + ENV GL + L I ++ Y + +L + ++GV Q R R+++L
Sbjct: 116 WRPRVFVFENVVGLATHQRGVDLDAIQESFSQLGYTTDWRILNAAHFGVPQKRERLILLG 175
Query: 296 SKPGYKLPSFPQPLH-----AFSNQ-----LFTINGNLVANKTSHAPYRSITVRDAISDL 345
++ G KL +P+P H +Q L +L ++ +S P ++TVRDAI DL
Sbjct: 176 AQQGVKL-RWPRPTHHGNFRTIGHQDPARLLRPSQPDLFSDSSSELPA-ALTVRDAIDDL 233
Query: 346 PRVSQGANCYLFHNPPKTHFQR 367
P + G + P +T +QR
Sbjct: 234 PPIGSGEAAERYDRPARTDYQR 255
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 493 TGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTI-VTTPNPLNKQGKILHPEQDRV 551
+G + IP L+ + + RL DE+ TI V +P + K +HP DR
Sbjct: 283 SGPNISYIPKHLI-----TSGFSSCYSRLEADEAAPTITVNFVHPASN--KCIHPNLDRA 335
Query: 552 LTVREYARAQGFPDSYVFRGGICD-MYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
LT RE AR Q F D++ F G + + KQIGNAVPP L K IG + + +G +
Sbjct: 336 LTPREGARIQSFDDNFRFAGTNRNAVAKQIGNAVPPLLGKVIGDAVAEMLGAGL 389
>gi|215260081|gb|ACJ64503.1| DNA-(cytosine-5)-methyltransferase [Sebastiscus marmoratus]
Length = 211
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 114/198 (57%), Gaps = 30/198 (15%)
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAI 342
R +ILA+ PG KLP +P+PLH F+ + ++N V+N T + YR+ITVRD +
Sbjct: 23 RAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDEKKYVSNVTRGNGGIYRTITVRDTM 82
Query: 343 SDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
SDLP + GA+ ++ P++ FQR ++ + +L+DHICK +S L+E
Sbjct: 83 SDLPEIRNGASGLEISYNGEPQSWFQRQIRG--------TQYQPILRDHICKDMSALVEG 134
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS----------VCDCKSS 450
R+R IP P +DWRDLPN+ V++ G + T+KL+Y+ KK+ VC C
Sbjct: 135 RMRHIPLAPGSDWRDLPNLEVRVKDG--TMTKKLRYSHPDKKNGRSSTGALRGVCTCSGG 192
Query: 451 SSCT-SKGQKNTIIPWSL 467
++C + Q NT+IPW L
Sbjct: 193 NACDPADRQFNTLIPWCL 210
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 43/312 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ +DLFSG GGL G AG C ++++ A+Y N+ + Q+D V S L
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGFESIC-AIDVNAKALATYQHNYPKTRTFQEDIRKVNPSEL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + G+ Q+ E+ ++ GPPCQGFS+ A + +N L +FL F F+P
Sbjct: 63 R---LYLGL---QREELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRP 116
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++++ENV ++ I I L YQV L + YGV Q+R+R LAS
Sbjct: 117 LHVVMENVPEILKAYNGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLASLE 176
Query: 299 GYKLPSFPQPLHAFS-----------NQLFTINGNLVANKTSHAPYRSITVRDAISDLP- 346
+LPS PQ H+ QL + N+ AP TV+DAISDLP
Sbjct: 177 --RLPSLPQATHSGDIRSDYKAVKSWTQLTLLEPNI-------APV--TTVKDAISDLPT 225
Query: 347 -RVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
Q + ++ P+T +Q+ M++ S + + +HI + L+P+ R++++
Sbjct: 226 LEAGQAYDHEIYTREPETIYQQKMREQS----------QKIVNHIARALTPIQMSRVQIL 275
Query: 406 PSFPNADWRDLP 417
D RDLP
Sbjct: 276 AE--GQDARDLP 285
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 513 NWQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
++ G GRL+WD+ TI P G+ HP Q+R +T+RE AR +PD + F
Sbjct: 293 HYSGAYGRLSWDKPARTITRWFFHPG----SGRFFHPTQNRTITIREAARLHSYPDHFHF 348
Query: 570 RGGICDMYKQIGNAVPPPLAKAIG 593
G DM QIG +VPP L K +
Sbjct: 349 LGTYTDMASQIGESVPPLLGKVVA 372
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 128/280 (45%), Gaps = 45/280 (16%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ L+LFSG GG G+ + + W+VE A +Y N V D + +L+
Sbjct: 863 PLRGLELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLLQH 922
Query: 177 LLKGHTQHKGVS--------------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
+ +H+G + +P + EVD I GPPCQ FS N R+ + ++
Sbjct: 923 TID---EHQGKNPPPLQSNDNKICPPMPNRGEVDFIFGGPPCQSFSGANHHRQADD--IR 977
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFN--------------KNEILQCIFHCLLKM 268
+ + LSF + + Y +LENV GL ++ K+ +++ I CL+ +
Sbjct: 978 STMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVAL 1037
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS----NQLFTINGNLV 324
QV + VLQ+G YG Q+R RV+ A+K G LP P PL+A+ + L L
Sbjct: 1038 GRQVQWKVLQAGQYGAPQNRERVIFWAAKRGLVLPKHPVPLYAWKRGAMSSLLPTGTKLP 1097
Query: 325 ANKTS--------HAPYRSITVRDAISDLPRVSQGANCYL 356
S +AP ITV+ AI DLP YL
Sbjct: 1098 PPTRSLVPGVCHQYAPLPPITVKTAIGDLPAFDWYGFLYL 1137
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG------ 572
GRL+ D F +T P K + LHP+Q R++TVRE AR+QGFPD+YVF
Sbjct: 1272 GRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVTVRELARSQGFPDNYVFETTGTGSAI 1331
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEI 596
D +QIGNAVP P+A A+G E+
Sbjct: 1332 FYDQIRQIGNAVPVPMALALGKEL 1355
>gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1333
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 95/381 (24%)
Query: 258 LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF----- 312
+ LL M YQV F L +GNYGV QSR RV I+A+ P LP++P+P+H+F
Sbjct: 975 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRQRVFIIAALPEEVLPNWPRPMHSFRVAAA 1034
Query: 313 --SNQ-------LFTING-----NLVANKTSHAPYRSITVRDAISDLPRVSQG--ANCYL 356
SN+ + G N V + P R++TVRDAI +LP ++ G + +
Sbjct: 1035 AGSNREGQQDQPFIRVPGGKYYANGVGMRLVGTPLRAVTVRDAIGNLPPITPGTKGDPAV 1094
Query: 357 FHNPPKTHFQRMMKDGS-----RIHD---------IHINLRELLQDHIC-KILSPLMEMR 401
P + +QR + + + R D +L DH+ ++LS
Sbjct: 1095 PLPRPMSAYQRRLAEAATAGWQRSADGAGYADGGVGGGAPPPVLADHVTPRVLSEFHAKA 1154
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
L+P P + + L +KLK A + + S++ + +
Sbjct: 1155 ASLVP----------PGMDIFL------VKDKLK-GAGDMTAAAAQQLSAATAGQTPEQY 1197
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ W L++ R G+ GRL F K + WS
Sbjct: 1198 LERWKLLNNLKRRKRRSGMYGRLCHTSYFRTATTKVGVDGWS------------------ 1239
Query: 522 AWDESFDTIVTTPNPLNKQGKILHP--EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
LHP +Q R ++VRE AR+QGFPD + F+G + D YKQ
Sbjct: 1240 ----------------------LHPDLDQQRTVSVREVARSQGFPDQHRFKGSVADCYKQ 1277
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
+GNAVPPPLA A+G ++ + +
Sbjct: 1278 VGNAVPPPLALALGLQLRQAL 1298
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 87/175 (49%), Gaps = 35/175 (20%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P PL LD+F+GCGGL EGL Q+GV+ W+VE + + A +Y N V+ DCN
Sbjct: 706 PTIRPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAEAYAENNPHTEVLVGDCNT 765
Query: 173 VLKSLLKGHTQHK--------------GVSLPQKH---------------------EVDL 197
+L+ + Q K G + P EV+L
Sbjct: 766 LLQEAMARAGQSKYCVVARGRQAEEGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVEL 825
Query: 198 IVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF 252
+V GPPCQGFS LNR EK+ N LV ++LS+CD ++P+Y ILENV G +
Sbjct: 826 LVGGPPCQGFSGLNRHPGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFY 880
>gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 158/381 (41%), Gaps = 96/381 (25%)
Query: 258 LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF----- 312
+ LL M YQV F L +GNYGV QSR RV I+A+ P LP++P+P+H+F
Sbjct: 987 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSFRVAAE 1046
Query: 313 --------SNQLF--TINGNLVAN----KTSHAPYRSITVRDAISDLPRVSQGA--NCYL 356
+Q F G AN + + P R++TVRDAI +LP ++ G + +
Sbjct: 1047 AGSNREGQQDQPFIEVPGGKYYANGAGMRLAGTPLRAVTVRDAIGNLPPITPGTKDDPAV 1106
Query: 357 FHNPPKTHFQ-----------RMMKDGSRIHD---IHINLRELLQDHIC-KILSPLMEMR 401
P + FQ + DGS D +L DH+ ++LS
Sbjct: 1107 PLPRPMSAFQWRLAEAATAGRQRSADGSEHADGGVGGGAPPPVLADHVTPRVLSEFHAKA 1166
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
L+P P + + L +KLK + + S+ T + +
Sbjct: 1167 ASLVP----------PGMDIFL------VADKLK--GPGDMTAAAAQQLSAATGQTPEQY 1208
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ W +V N G+ GRL F K + WS
Sbjct: 1209 LERWQVVEPNLPENRRSGMYGRLCHTSYFRTATTKVGVDGWS------------------ 1250
Query: 522 AWDESFDTIVTTPNPLNKQGKILHP--EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
LHP +Q R ++VRE AR+QGFPD + F+G + D YKQ
Sbjct: 1251 ----------------------LHPDLDQQRTVSVREVARSQGFPDQHRFKGSVADCYKQ 1288
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
+GNAVPPPLA A+G ++ + +
Sbjct: 1289 VGNAVPPPLALALGLQLSQAL 1309
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 88/173 (50%), Gaps = 36/173 (20%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL LD+F+GCGGL EGL Q+GV+ W+VE + + A +Y N V+ DCN +L+
Sbjct: 728 PLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQE 787
Query: 177 LLKGHTQHK--------------GVSLPQKH---------------------EVDLIVAG 201
+ Q K G + P EV+L+V G
Sbjct: 788 AMARAGQSKYCVVARGREAEEGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVGG 847
Query: 202 PPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNK 254
PPCQGFS LNR EK+ N LV ++LS+CD ++P+Y ILENV G F+K
Sbjct: 848 PPCQGFSGLNRHPGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFT-FHK 899
>gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 158/381 (41%), Gaps = 96/381 (25%)
Query: 258 LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF----- 312
+ LL M YQV F L +GNYGV QSR RV I+A+ P LP++P+P+H+F
Sbjct: 987 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSFRVAAE 1046
Query: 313 --------SNQLF--TINGNLVAN----KTSHAPYRSITVRDAISDLPRVSQGA--NCYL 356
+Q F G AN + + P R++TVRDAI +LP ++ G + +
Sbjct: 1047 AGSNREGQQDQPFIEVPGGKYYANGAGMRLAGTPLRAVTVRDAIGNLPPITPGTKDDPAV 1106
Query: 357 FHNPPKTHFQ-----------RMMKDGSRIHD---IHINLRELLQDHIC-KILSPLMEMR 401
P + FQ + DGS D +L DH+ ++LS
Sbjct: 1107 PLPRPMSAFQWRLAEAATAGRQRSADGSEHADGGVGGGAPPPVLADHVTPRVLSEFHAKA 1166
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
L+P P + + L +KLK + + S+ T + +
Sbjct: 1167 ASLVP----------PGMDIFL------VADKLK--GPGDMTAAAAQQLSAATGQTPEQY 1208
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ W +V N G+ GRL F K + WS
Sbjct: 1209 LERWQVVEPNLPENRRSGMYGRLCHTSYFRTATTKVGVDGWS------------------ 1250
Query: 522 AWDESFDTIVTTPNPLNKQGKILHP--EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
LHP +Q R ++VRE AR+QGFPD + F+G + D YKQ
Sbjct: 1251 ----------------------LHPDLDQQRTVSVREVARSQGFPDQHRFKGSVADCYKQ 1288
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
+GNAVPPPLA A+G ++ + +
Sbjct: 1289 VGNAVPPPLALALGLQLSQAL 1309
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 86/171 (50%), Gaps = 35/171 (20%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL LD+F+GCGGL EGL Q+GV+ W+VE + + A +Y N V+ DCN +L+
Sbjct: 728 PLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQE 787
Query: 177 LLKGHTQHK--------------GVSLPQKH---------------------EVDLIVAG 201
+ Q K G + P EV+L+V G
Sbjct: 788 AMARAGQSKYCVVVRGREAEEGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVGG 847
Query: 202 PPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF 252
PPCQGFS LNR EK+ N LV ++LS+CD ++P+Y ILENV G +
Sbjct: 848 PPCQGFSGLNRHAGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFY 898
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 48/314 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL GL AG P ++ E+E A +Y N ++ D + S L+
Sbjct: 34 VDLFAGAGGLSCGLEMAGF-HPLFANEIEPVYANTYKHNHPNTDLVIGDVRQMCASTLR- 91
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ GV ++ E+DL+ GPPCQGFS R L+ + N L ++S PK
Sbjct: 92 --ERLGV---KQGEIDLLAGGPPCQGFSINAPIRSLDDDR--NYLFREYISVAQELLPKA 144
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK-PG 299
I++ENV G++ K +++ I+ L ++ Y+V +L +G+YGV Q R R + LA P
Sbjct: 145 ILIENVPGIISLGKGTVVEKIYSELEQLGYKVNHRILFAGHYGVPQMRFRTIFLAIHLPD 204
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKT-------------SHAPYRSITVRDAISDLP 346
++ FP+PL+ N VAN T S + +V DAISD+P
Sbjct: 205 VEI-KFPEPLY---------NAKAVANFTGAKELCLDVLPLFSQSLKPQTSVWDAISDMP 254
Query: 347 RVSQGANC--YLFHNP-PKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
++ G + +P PK+ +Q+++++GS + + +H C L + R++
Sbjct: 255 KIESGEKNEKIKYGSPYPKSEYQKILRNGS----------DYVYNHNCNNLGQINLDRLK 304
Query: 404 LIPSFPNADWRDLP 417
IP WRD+P
Sbjct: 305 HIPQ--GGSWRDIP 316
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 500 IPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
IP+ L+ +R ++ GRL + TI+T +P G HP QDRV++VRE
Sbjct: 315 IPFELLPAGLKRARRSDHTKRYGRLDPNGLCSTILTKCDP--HWGSFFHPTQDRVISVRE 372
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
AR Q FPDSY F G + Y+Q+GNAVPP +A IG II +G
Sbjct: 373 AARIQSFPDSYHFTGSVTQQYEQVGNAVPPLMAYEIGKTIINMLG 417
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine
max]
Length = 1143
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP EVD+I GPPCQG S NR R +N + F+ +P+Y+++ENV
Sbjct: 701 LPLPGEVDVICGGPPCQGISGYNRFRNCASPLDDERNRQIVIFMDMVKFLKPRYVLMENV 760
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ F+K + + L+ MNYQ ++ +G YG+ Q R RV + + P +P FP
Sbjct: 761 VDILRFDKGSLGRYALSRLVHMNYQARLGIIAAGCYGLPQFRLRVFLWGAHPSEVIPQFP 820
Query: 307 QPLHAFSNQLF---TINGNLVA--NKTSHAPYRSITVRDAISDLPRV--SQGANCYLFHN 359
P H + + N+VA + ++ ++DAISDLP V ++ + + N
Sbjct: 821 LPTHDVIVRYWPPPEFERNVVAYDEEQPRELEKATVIQDAISDLPAVMNTETRDEMPYQN 880
Query: 360 PPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
PP+T FQR ++ GS+ + R LL DH L +R+ IP A++
Sbjct: 881 PPETEFQRYIRSTKYEMTGSKSNGT-TEKRPLLYDHRPYFLFEDDYLRVCQIPKRKGANF 939
Query: 414 RDLPNICV 421
RDLP + V
Sbjct: 940 RDLPGVIV 947
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T +T P+ N+ +LHPEQDRVLT+RE+AR QGFPD Y F G + + Y
Sbjct: 986 FARLWWDENLPTALTFPSCHNQV--VLHPEQDRVLTIREFARLQGFPDYYRFYGTVKERY 1043
Query: 578 KQIGNAVPPPLAKAIGYEI 596
QIGNAV P+++A+GY +
Sbjct: 1044 CQIGNAVAVPVSRALGYAL 1062
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 210/492 (42%), Gaps = 75/492 (15%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D P +DLF+G GG+ G G K ++ + +++ A+ N E + +
Sbjct: 3 DRPFLSIDLFAGAGGMTTGFKNQGF-KLLFANDCDQAALATLSHNHPEAMTSSESIESLN 61
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
L+ + ++L +K ++D+++ GPPCQGFS + L++ +N L FL F +
Sbjct: 62 PFELR-----QTLNL-RKGDLDILLGGPPCQGFSTYGKRDPLDQ---RNRLYRYFLKFLE 112
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
F+PK ++ENV G++ +++ I + K+NY V+ L + ++GV Q R RV IL
Sbjct: 113 EFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFIL 172
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGN----LVANKTSHAPYR-SITVRDAISDL---- 345
K+ P H S + + + ++ PY+ +I V +AI DL
Sbjct: 173 GGSNHQKIQP-PSATHEISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEV 231
Query: 346 --PRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIR 403
PR++ + Y PP + R ++ + E+L H K + + +R+
Sbjct: 232 LPPRLTHESIPY----PPVSGLSRYQQE------LRSKTGEILH-HSAKRMMGIRRLRLA 280
Query: 404 LIPSFPNADWRDLPNICVKLPRGQHS--YTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNT 461
L+ D+ I +L G S ++L + + +C+ + +
Sbjct: 281 LMRP---GDYGT--EISSRLKEGGFSRELIDQLLKGGNGLRDIHECRRQDREKEEKLREI 335
Query: 462 IIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRL 521
+ + + Q VL +S D G N RL
Sbjct: 336 LQQGHV--------DIQEVL------QSLDSGGFANKY-------------------RRL 362
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
W+ T+V + +HPE DRV +VRE AR Q PD Y F G +KQIG
Sbjct: 363 DWNAPSHTLVA--HMARDCSDFIHPEFDRVNSVRESARLQSCPDRYYFHGSQFQQFKQIG 420
Query: 582 NAVPPPLAKAIG 593
NAVPP LA+AI
Sbjct: 421 NAVPPKLAEAIA 432
>gi|386087512|ref|YP_006003386.1| cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387910603|ref|YP_006340909.1| cytosine-specific methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387575538|gb|AFJ84244.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus MN-ZLW-002]
Length = 515
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 220/539 (40%), Gaps = 88/539 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGV--------AKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+DLF G GG EG+ QAG + + R + + D +
Sbjct: 4 AIDLFCGAGGFSEGILQAGFDILFSSDRSPMAQETYVNRHRQLGLEEGVDTHFELADIKD 63
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
L + + + + ++ + ++D+I GPPCQGFS+L + + S +N L +L
Sbjct: 64 LTSERIFEVINNLRYGNIFEPGDIDVIFGGPPCQGFSRLGKR---DASDPRNMLFHEYLR 120
Query: 232 FCDLFQPKYIILENVTGLV---------------HFNKNEILQCIFHCLLKMNY-QVTFD 275
+PKY+++ENVTG++ +F + + + + L ++ Y +
Sbjct: 121 IIRDVRPKYVVMENVTGILDMLMLDFPSVVKDESYFGQRLVKEILREELQELGYILLDVQ 180
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQP-------LHAFSNQLFTIN-------- 320
VL S N+GV Q RNRVV LA + +P+P + L+ IN
Sbjct: 181 VLNSANFGVPQQRNRVVFLAYRNDVNPLEYPEPNVLPEVTVRDALTGLYNINQDDISEYA 240
Query: 321 GNLVANKT-----SHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRI 375
N + +T + P IT + VSQ + Y + R+ +G +
Sbjct: 241 QNRIQGETPTVAGGNIPREQITNMEESRHDILVSQRFSLYQPGENTRAVINRLKAEGINL 300
Query: 376 HDIHINLRELLQDHICKI-LSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKL 434
D H +EL + + ++ LS E+ + D + L + + Q + L
Sbjct: 301 RDTH---QELFNESLFQVNLSINSEVIHETLLKLNLFDNKFLTSRWLHFTNRQLATLSSL 357
Query: 435 KYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFD--- 491
N ++ V +S T+ Q +T W V Q +L R ++F+
Sbjct: 358 INNEQEFTIVLKSLASRLNTTLDQASTF--WETV---------QPLLNREYDADTFNRLL 406
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRV 551
M G+ I +++ S + RL D TIVT P+ +HP DRV
Sbjct: 407 MNGEITDKIGEAILTRKS-------IRTRLNPDSVSPTIVTLPD------DFIHPYFDRV 453
Query: 552 LTVREYARAQGFPDSYVFRGGICD----------MYKQIGNAVPPPLAKAIGYEIIKCI 600
LTVRE AR Q F DS+ F G + Q+GNAVPP LA+AI ++ + I
Sbjct: 454 LTVREMARMQSFDDSFEFLGKRTTGGDKRSQETPQFTQVGNAVPPLLARAIALKVREAI 512
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 171/410 (41%), Gaps = 79/410 (19%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP +V ++ GPPCQG S NR R +K KN V F+ D +PKY+++ENV
Sbjct: 350 LPLPGDVHIVCGGPPCQGLSGFNRFRNKDKPLQDEKNNQVTVFMDIIDYLKPKYVLMENV 409
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F K + + L+ NYQ ++ +G YGV Q R RV + ++P +L
Sbjct: 410 VSLLGFAKGFVGRYAVARLVNKNYQARLGIMAAGAYGVPQCRYRVFLWGAQPSEELKV-- 467
Query: 307 QPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHNPPKTH 364
GN N++ ++T+ DA SDLP V+ + + P+T
Sbjct: 468 --------------GN---NRSDLQLKTALTLGDATSDLPEVTNFEEREAINYDIEPETE 510
Query: 365 FQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLP 424
FQ+ + R + N E Q I PL + D++ NI K
Sbjct: 511 FQKFIS-LPRADTLISNGEEESQLRILYDHQPLQMNK---------DDYQRACNISKK-- 558
Query: 425 RGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRL 484
+ +Y L + K+V S K + +++ + R+ + GRL
Sbjct: 559 --KGAYFTDLGGVVFEDKTVRIDPSVERVILPSGKPMVPNYAITY---RDGKSKKPFGRL 613
Query: 485 AWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKIL 544
+DE NT++ + H Q VL
Sbjct: 614 WYDEII------NTVVTRAQPHN-------QCVL-------------------------- 634
Query: 545 HPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
HP+Q+RVL+ RE AR QGFPD Y G + + Y Q+GNAV P+ A+GY
Sbjct: 635 HPKQNRVLSARENARLQGFPDCYRLYGPVDEKYIQVGNAVAVPVGVALGY 684
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 44/300 (14%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLLK 179
+DLF G GGL EGL QAG + + +++ ++ A E + + ++ + LK
Sbjct: 2 IDLFCGAGGLSEGLRQAGFSILAGN-DVDEHAGNTFAATHPEAAFLPGSIYDITAQDFLK 60
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ +K E+D + GPPCQG+S N R + + + L +L + PK
Sbjct: 61 -------ATGLKKEELDCLAGGPPCQGYSVYNHQRGMHDER--SHLFKEYLRIVEGLMPK 111
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
++++ENVTG++ + E Q + + + Y V +L++ +YGV Q R RVV + ++ G
Sbjct: 112 WLVMENVTGIMSAGEGEAFQAVLAGIRGLGYDVEAKILRAEDYGVPQERRRVVFIGNRIG 171
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL--F 357
+ +PQ H + FT T++DA+SDLP + G + + +
Sbjct: 172 SPI-IWPQKTHGEGLKPFT------------------TIKDALSDLPELLNGEDKGVGKY 212
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P + +QR ++ GS +L+ +H L + R+R IP WRD+P
Sbjct: 213 KTRPTSEYQRELRKGS----------QLVHNHSASKLGAINIERMRYIPQ--GGSWRDVP 260
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GR+ WD T++T + G +HPEQDR +TVRE AR Q FPD + F G + +
Sbjct: 281 GRMQWDGQSCTVLTKCDI--HWGAYIHPEQDRSITVREAARIQSFPDWFHFTGPRTEQFV 338
Query: 579 QIGNAVPPPLAKAIGYEIIKC 599
Q+GNAVPP L + IG ++K
Sbjct: 339 QVGNAVPPLLGRCIGSALVKA 359
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 189/451 (41%), Gaps = 101/451 (22%)
Query: 194 EVDLIVAGPPCQGFSQLNR--ARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVH 251
+VD ++ GPPCQG S LNR R + +N V F + FQP Y+++ENV +
Sbjct: 1 DVDAVMGGPPCQGVSGLNRHAKRADIVNDPRNRQVQAFYDVIEWFQPGYVLMENVLDI-- 58
Query: 252 FNKNEILQCIFHC--LLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY-KLPSFPQP 308
F K + + F LL M YQ + + ++G Q R R + +K G +LP+FP+P
Sbjct: 59 FKKQDGMYAKFAASRLLNMRYQTRLGCIAACDHGAPQGRWRAFMWGAKAGVEQLPAFPEP 118
Query: 309 LH--AFSNQLFTINGNLVANKTSHAPYRS----ITVRDAISDLPRVSQ--GANCYLFHNP 360
H F + + TS A + + + D +SDLP +S A + +
Sbjct: 119 SHFAVFQGGVPHSASECIVGFTSEASRDAARQMVFMGDVLSDLPEISNYTTAEAAQYASD 178
Query: 361 PKTHFQRMMKDGSRIHDIHINLRELLQ--DHICKILSPLME-----------MRIRLIPS 407
PKT +Q ++ + +H+ ++L+ +H K + PL + +R +PS
Sbjct: 179 PKTPYQMWLR--RQPPAVHMFDEQVLKEAEHAEKAVGPLRDHRSLCLNFDDHLRCCSVPS 236
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP-WS 466
+A++R++P + + + V + + + P W
Sbjct: 237 KKDANFREMPGV--------------ITHGDGAVCGVVGAGCPGTTVFLPTGDLLCPRWC 282
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
+ + ++ G GR+ +DE I P
Sbjct: 283 VTYKQGKSGGRHGCFGRMWYDE----------IQP------------------------- 307
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG-------------GI 573
T+V P N +++HP Q RV+++RE AR QGFPD + G +
Sbjct: 308 --TVVGRAEPHNL--RLIHPTQGRVVSIRENARCQGFPDYFALAGISHAHQDTWVRNNNL 363
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
+ Y+Q+GNAV P +A A+G +C+G A
Sbjct: 364 TERYQQMGNAVSPLVADALG----RCLGIAA 390
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C ++ ++ + K + LP +VD+I GPPCQG S NR R + S +N +
Sbjct: 317 NCQECIRDFVRKGFKSKILPLP--GDVDVICGGPPCQGISGYNRFRNVNAPLSDERNRQI 374
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F+ +PK++++ENV ++ F+K + L+ M YQ + +G YG+ Q
Sbjct: 375 VVFMDIVQFLKPKFVLMENVVDILKFDKASFARYALSRLVHMKYQARLGTIAAGCYGLPQ 434
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING---NLVANKTSHAP--YRSITVRDA 341
R RV + + P KLP FP P H + + N N VA ++ ++DA
Sbjct: 435 FRLRVFLWGAHPSEKLPQFPLPTHDVIVRYWPPNEFERNTVAYDEGQPRELEKAAVLQDA 494
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDI-------HINLRELLQDHICK 392
ISDLP V+ + + PP+T FQR ++ S H++ + LL DH
Sbjct: 495 ISDLPPVTTHETREEMAYEKPPETEFQRFIR--STEHEMTGSSQRGTTQMNNLLSDHRPY 552
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICV 421
L+ R+ LIP A++RDLP I V
Sbjct: 553 ALTEEDCARVCLIPKRKGANFRDLPGILV 581
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
RL WDE+ T+VT P+ ++ Q +LHPEQDR LT+RE AR QGFPD Y F G + + Y+
Sbjct: 622 ARLWWDETVPTVVTYPS-IHSQA-MLHPEQDRALTIRECARLQGFPDYYRFSGTVKERYR 679
Query: 579 QIGNAVPPPLAKAIGYEI----IKCIGNA----VPPPLAKAIGYEIIK 618
QIGNAV P+ +A+GY + +K G+ +PP + + ++ K
Sbjct: 680 QIGNAVAVPVGRALGYALGMAFLKLSGDGPLMTLPPKFSHSTNLQLAK 727
>gi|406865911|gb|EKD18952.1| beta-Ala-His dipeptidase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 2005
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 183/405 (45%), Gaps = 73/405 (18%)
Query: 23 DNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEYYRKTKD- 81
D+ LF T ID S++ VC +V + ++ LD+ ++KD + + D
Sbjct: 1434 DSRRLFFTGETIKIDGSIVDG-VC--YVLHRDHVDD-LDSFKDQKDTFWVKDRLEEEIDW 1489
Query: 82 KHFVQP-NARPLELAYIL----------KIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGL 130
V+P + RPL+ + K+I +EFL + + L+LF+G GGL
Sbjct: 1490 DSCVRPRDLRPLDSGSVRYSATKFEHEKKMILVREFLER-----GEKARTLELFNGIGGL 1544
Query: 131 MEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLLKGHTQHKGV-- 187
+ G++ +VE++ + + N V + D NL+L+++ + G
Sbjct: 1545 T--VAFKGISGITNAVEIDPAACVTMRNNQPGVIVHKGDASNLLLRAIKRDQGAKLGKLF 1602
Query: 188 --------SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
LP + +VD I GPPC G+S N ++ + KN LV + ++ D ++PK
Sbjct: 1603 DGKGNLIPDLPFRDQVDFIKGGPPCPGYSVANCQKK--DGEPKNSLVALYSAYVDFYRPK 1660
Query: 240 YIILENVTGLVHFN----------------KNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
Y ++ENVTGL+H +N ++ I+ M YQV VL + +G
Sbjct: 1661 YSLIENVTGLIHHTLRTPESNDFKTKPETLENGTIRMIYRTYTSMGYQVQCAVLYAEEHG 1720
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ----LFTINGNLVAN------KTSHAPY 333
QSR RV+I A++PG +LP +PQP H + + +F L + K P+
Sbjct: 1721 SPQSRPRVIIWATQPGCRLPEYPQPEHLWKTRAACPIFMPGSKLNQSDFHWHRKRRSTPH 1780
Query: 334 RSITVRDAISDLPRVSQGANCYLFHNP----PKTHFQRMMKDGSR 374
R +T+ DA DLP Y NP P+T FQ+ + R
Sbjct: 1781 RVVTLGDAWIDLPE-------YDIKNPHLIIPQTRFQKFEAEQRR 1818
>gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum]
Length = 939
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 124/258 (48%), Gaps = 20/258 (7%)
Query: 111 PMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF--QECSVIQ 167
P+P D P +K +DLF G G GL + GV W+V+++ A+Y AN Q+ ++
Sbjct: 526 PLPNDKPRMKGMDLFCGGGSFGRGLEEGGVIDMKWAVDIDVPAIATYRANLRNQDTALYL 585
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
N ++ ++G H V+ P EVD I AG PCQGFS N+ + + LV
Sbjct: 586 GSVNNYMEDAIRGKYSHL-VAHPD--EVDFISAGSPCQGFSNANQLKNNDTGLRNCSLVA 642
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNK------NEILQCIFHCLLKMNYQVTFDVLQSGN 281
+ + D+F+P+Y +LENV GL K + + C++ M YQ L S +
Sbjct: 643 SVATAVDVFRPRYALLENVGGLASTRKLSTGVEVNVFAQLVCCVVGMGYQTQQFTLDSWS 702
Query: 282 YGVAQSRNRVVILASKPGYKLPSFPQPLHAFS-----NQLFTI-NGNLVANKTSHA--PY 333
+G AQSR R+ + + PG LP P H LFT NG+ A + PY
Sbjct: 703 FGSAQSRTRLFLSIAAPGTGLPPRPTRSHDHGPFVKKRGLFTAPNGDKFAQREIEGPCPY 762
Query: 334 RSITVRDAISDLPRVSQG 351
+T ++ + LP + G
Sbjct: 763 SLVTFKNGMRGLPNLGTG 780
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
G +HP +DR++TV E RAQ FPD V G +K +GN+V +A A G +
Sbjct: 871 GTWVHPMEDRLITVMEARRAQSFPDDEVLLGNNAQAFKIVGNSVARSVALAWGVSM 926
>gi|428219888|ref|YP_007083360.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992231|gb|AFY71924.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 413
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 112/190 (58%), Gaps = 14/190 (7%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
++T CLDLF+GCGG+ GL ++G C VE++R A + ANF ++++ D +
Sbjct: 2 VETMFSCLDLFAGCGGMALGLKRSGFDHACL-VEIDRQAAQTLRANFDPATIVEAD---I 57
Query: 174 LKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+K +G+ Q +G ++DL+ AGPPCQ FS R L+ S+ + LV+ L
Sbjct: 58 IKLNREGYFAQFRG-------QIDLLSAGPPCQSFSYAGNQRGLDDSRGQ--LVYETLKT 108
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+ QPK +++ENV L N ++L+ I L + Y+ + +L + +YGVAQ+R R++
Sbjct: 109 IEQVQPKMVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQILNANDYGVAQNRQRLI 168
Query: 293 ILASKPGYKL 302
ILA++ G+++
Sbjct: 169 ILATRKGWRI 178
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 515 QGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC 574
+G+ RLAW E T++ +P KQ + HP+ R LTVREYAR QGFPDS+VF G +C
Sbjct: 247 RGMARRLAWHEPSLTLLCSP--AQKQTERCHPDYTRPLTVREYARIQGFPDSFVFTGSVC 304
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKCI 600
Y+QIGNAVP LA+AIG II I
Sbjct: 305 SRYRQIGNAVPVDLAEAIGKSIISAI 330
>gi|443476547|ref|ZP_21066447.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443018456|gb|ELS32699.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 425
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 186/483 (38%), Gaps = 111/483 (22%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF VI + + ++
Sbjct: 8 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHEYNFPMWKVICANVTKISGDEIR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+Q EVD++ GPPCQGFS + + R + +N LV F+ K
Sbjct: 67 QKSQ------IGDREVDVVFGGPPCQGFSLMGK-RAFDDP--RNELVSHFMRIVTELNAK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV GL N + L + + Y+V + VL + ++GV Q R R+ ++ +
Sbjct: 118 YFVMENVKGLTVGNHRKFLDEVIDSFEQNGYKVLQNYKVLNAAHFGVPQHRERLFLIGCR 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
LP++P P+ +A + P S TV +AI+DL ++Q
Sbjct: 178 QDVHLPNYPAPITK------PAKAKRIAKELIDLP-NSPTVYEAIADLQDIAQHP----- 225
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
LL C + LI F
Sbjct: 226 --------------------------ALLNQDFCTATISGSSKYVELINDF--------- 250
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNW 477
G+ ++ K K+NA S K S + + N
Sbjct: 251 --------GKANFGYKRKHNANILTSSLMSKHGESSKYRFR----------------NTA 286
Query: 478 QGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPL 537
QG + R++ D+ G NT+ A S T P P
Sbjct: 287 QGEVERISRFYKLDLNGISNTL---------------------RAGTPSNRGAFTAPRP- 324
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
+HP R +TVRE AR +PD + F I ++Q+GN+VPP LAKA+ +I+
Sbjct: 325 ------IHPNSPRCITVREAARLHSYPDWFRFHKTIWHGFRQVGNSVPPLLAKAVASQIM 378
Query: 598 KCI 600
+ +
Sbjct: 379 EIL 381
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 30/231 (12%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GG+ G QAG P SVEL+ A + NF S++ C V++ L G
Sbjct: 7 IDLFAGAGGMTLGFEQAGFDIPI-SVELDPIHCAIHKFNFPFWSIL---CRNVVE--LTG 60
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ + +++P + E+D+I GPPCQGFSQ+ + R L+ + N L+ FL +PKY
Sbjct: 61 NEIREKLNIPNR-EIDVIFGGPPCQGFSQIGK-RALDDPR--NALISHFLRIVLELKPKY 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
++ENV GL L+ + + L K +YQ+ + VL + NYGV Q R R+ IL K
Sbjct: 117 FVIENVKGLTVGKHQIFLEEVINKLSKNSYQLQLPYQVLNAANYGVPQHRERLFILGCKK 176
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
G KLP++PQ + +K S A I V DAI DLP V
Sbjct: 177 GLKLPNYPQ---------------IQIHKKSEA---YINVWDAIGDLPEVE 209
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 311 TSPRPI-------HPLTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 363
Query: 592 IGYEIIKCI 600
+ EII +
Sbjct: 364 VAQEIIHAL 372
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 69/296 (23%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL--- 174
L+ L+LF G GGL GL +G + W+ ++ S A ++ +N + +V +L+L
Sbjct: 673 LQGLELFCGAGGLGTGLEMSGFVETKWAADISPSSAKTFKSNHPDATVYNQCTSLLLEHA 732
Query: 175 ---------KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+ L T S+PQ +V+ I GPPCQ FS++N + + ++ L
Sbjct: 733 MAVADGDSPRPLKSLGTNETLPSMPQPGDVNFIYGGPPCQPFSRMNSHK--KSDDIRATL 790
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFN-------------------------------K 254
V LS+ + ++P++ +LENV G++ K
Sbjct: 791 VANMLSYVEFYRPRFFLLENVLGMLGHKLEDQIGREQDNQLKGRLPKERSSDEQEDQSIK 850
Query: 255 NEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN 314
+++ I CLL + YQ+ F +L +G YG QSR R++ +K G +P+FP P H+ N
Sbjct: 851 FGVVKFITRCLLALGYQIQFKILNAGQYGAPQSRRRIIFWGAKNGELMPAFPLPTHSLQN 910
Query: 315 ---------------------QLFTINGNLVANKT---SHAPYRSITVRDAISDLP 346
L+ + ++ T S AP +T+ DAI DLP
Sbjct: 911 PLQKSLLPTGSWSLPVTWDHQGLWLLQDSVYEEVTGLHSCAPLDMVTIEDAIGDLP 966
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 520 RLAWDESFDTIVTTPNPLNKQ--GKILHPEQDRVLTVREYARAQGFPDSYV-------FR 570
RL + F TI+T+ PLN + G +HP Q R L++RE ARAQGFPD Y F
Sbjct: 1071 RLRANSLFKTIMTS-MPLNGRHAGSSIHPTQKRGLSIREVARAQGFPDHYKLESFNRDFN 1129
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ +QIGNAVP PL+ A+G + + +
Sbjct: 1130 KLAVNQLRQIGNAVPIPLSHALGRSLGETL 1159
>gi|345867871|ref|ZP_08819872.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344047793|gb|EGV43416.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 387
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 60/399 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
++ +DLFSGCGGL G AG + +++ + +Y NF I++D + +
Sbjct: 1 MQVVDLFSGCGGLALGFKWAGF-NTLLASDVDENCEKTYTHNFPNVPFIRNDLRDISTAE 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K D+++ GPPCQGFS N+ R KS +N L + F+ Q
Sbjct: 60 IKSIISRTP---------DVVIGGPPCQGFSLANKNRNKVKSDPRNELFYEFVRVVTDLQ 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCL--LKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
PK ++ENV GL+ K E+++ + + YQV + VL + +YGV Q+R+RV+++
Sbjct: 111 PKAFVMENVRGLLSMQKGEVIKLMKEEFENAGIGYQVDYKVLLASDYGVPQNRHRVIMIG 170
Query: 296 -SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGA 352
K K P FP NKT P +TV +AISDLP++ S+G
Sbjct: 171 IRKDLEKQPLFP-------------------NKTYENP---VTVWEAISDLPQIKASEGD 208
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
++ P+ +FQ ++ ++ HI +R H ++++ R ++I + +
Sbjct: 209 EKMMYETDPENNFQEFIRQENQKVYNHIAMR-----HTQRLIN-----RFQVIKAGESLA 258
Query: 413 WRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS 472
VK RG K+ ++ ++ + K + + + Q N I P+ + +
Sbjct: 259 HVSQEYGAVK--RGNPKEKSKVVFSQNNQRLRAN-KPAPTIAASFQSNFIHPFLHRNFTA 315
Query: 473 R----------NNNWQGVLGRLAWDESFDMTGQKNTIIP 501
R N +QG+ +++W++ Q +P
Sbjct: 316 REGARLQSFPDNFIFQGMRTKMSWEKGLSQYQQIGNAVP 354
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM--------YKQIGNAVPPPLAKA 591
Q +HP R T RE AR Q FPD+++F+G M Y+QIGNAVPP L
Sbjct: 301 QSNFIHPFLHRNFTAREGARLQSFPDNFIFQGMRTKMSWEKGLSQYQQIGNAVPPLL--- 357
Query: 592 IGYEIIKCI 600
GY I K +
Sbjct: 358 -GYAIAKAL 365
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 191/486 (39%), Gaps = 149/486 (30%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKS 176
+ LDLF G GG G+ Q + +++ E+S ++ NF + VI D ++ +K+
Sbjct: 6 FRVLDLFCGAGGFSSGIDQNPYFETLLALDFEQSAINTFSHNFPKAQVICGDITDIKIKN 65
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L + ++ +V++I+ GPPCQGFS + ++L +N L +L
Sbjct: 66 TL--------IKQAKRLKVNMIIGGPPCQGFSL--KGKKLGLQDPRNFLFLEYLDIVKQL 115
Query: 237 QPKYIILENVTGLVH----FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
QP+ I+ENV + + KNEI + I + Y+V +L + ++ V Q+R R
Sbjct: 116 QPELFIIENVKSIFSTANGYFKNEIERHI----QDLGYKVDSAILNAKDFCVPQNRERAF 171
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQ 350
+A K Y FP P + V+DAISDL + +Q
Sbjct: 172 FIAHKKEYL--GFPAPSEM-----------------------QVCVKDAISDLAYLQSNQ 206
Query: 351 GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
G + NPP++ +Q+M++ E+LQ H S + ++ +IP
Sbjct: 207 GEITSPYKNPPQSAYQKMLRG------------EILQYHKASNHSQIAIKKLEMIPKEKG 254
Query: 411 ADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHT 470
++ LP+ H K K+N
Sbjct: 255 KEY---------LPKNLHG---KQKFNT-------------------------------- 270
Query: 471 ASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTI 530
W GRL W+E I P D FDT
Sbjct: 271 -----TW----GRLKWNE----------ISP--------------------TIDTRFDT- 290
Query: 531 VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAK 590
P N G HP R +T RE AR Q F DS++F G + KQIGNAVPP LAK
Sbjct: 291 -----PSN--GTNSHPFLHRSITPREAARIQSFSDSFIFLGKKTQVCKQIGNAVPPLLAK 343
Query: 591 AIGYEI 596
A+ I
Sbjct: 344 ALADHI 349
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 192/488 (39%), Gaps = 97/488 (19%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LF+G GG+ G AG W+ + + + +Y N + ++ D + +
Sbjct: 7 VVSLFAGAGGMDLGFIHAGF-DVIWANDFDVNAVNTYRKNIGD-HIVHGDITQIPSEEIP 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G +VD+++ G PCQGFS N R +E + N L L +PK
Sbjct: 65 GE------------DVDVVIGGFPCQGFSVANTKRSMEDKR--NFLYLELLRIVKDKKPK 110
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+ + ENV GL+ +K ++++ I + K+ Y V + VL + +YGV Q R RV+I+ ++ G
Sbjct: 111 FFVAENVKGLLSMSKGKVIEMIKNDFEKLGYTVEYRVLNAADYGVPQLRERVIIIGNRFG 170
Query: 300 YKLPSFPQPLHAFSNQ-------LFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ P +P+ H F + +F I PY I+V +AI L +
Sbjct: 171 IQNP-YPEKTHKFMQEVDPEQIDIFDIEN---YKDKDLKPY--ISVEEAIGYLSDIRTRN 224
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINL----RELLQDHICKILSPLMEMRIRLIPSF 408
+ + RM+ + ++ E+ Q IC L
Sbjct: 225 ETFELNG-------RMILNHVASENVSDTFWGRKHEVDQAEICDYLK------------- 264
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLV 468
+WR I VK Y + +K D KS S IP
Sbjct: 265 ---EWRKKAGISVKAIDKHFGYNHTAGHWFRK-----DNKSGS-----------IP---- 301
Query: 469 HTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFD 528
+ +W + L +D+ +D + + ++ L W D
Sbjct: 302 ----KPEDWWELKKLLDFDDKYDK----------QVTEFIEKEIKFEQSLRITNWKRPSD 347
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
TI T P +H + R L+VRE A Q FP + F G + MY+Q+GNAVP L
Sbjct: 348 TI-TASQPE------IHVNKKRRLSVRECAIIQTFPYDFEFTGSLNAMYRQVGNAVPVLL 400
Query: 589 AKAIGYEI 596
AK I I
Sbjct: 401 AKKIAIGI 408
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 194 EVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVH 251
+VD++ GPPCQG S NR RE E KN + F+ +PKY+ +ENV ++
Sbjct: 802 DVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILK 861
Query: 252 FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA 311
F + + L+ M+YQ ++ +G YG+ Q R RV +L KLP FP P H
Sbjct: 862 FADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTH- 920
Query: 312 FSNQLFTING-------NLVA--NKTSHAPYRSITVRDAISDLPRVSQGA--NCYLFHNP 360
+ NG NLV N T R I + D +SDLP V+ G + L+
Sbjct: 921 ---EAIVKNGCPLAFERNLVGWPNDTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKG 977
Query: 361 PKTHFQRMMKD------GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
P+T FQR ++ G R H + L DH +L RI IP A++R
Sbjct: 978 PQTEFQRYIRSFNVEVHGPRAHVTKDSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFR 1037
Query: 415 DLPNICV 421
DL + V
Sbjct: 1038 DLSGVIV 1044
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ WDE T++T PN + ++HP QDR+LT+RE AR QGFPD+Y FRG + D Y
Sbjct: 1084 FGRVWWDEVVGTVLTVPNA--RMQALIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRY 1141
Query: 578 KQIGNAVPPPLAKAIGYEI 596
+QIGNAV P+ +A+GY +
Sbjct: 1142 RQIGNAVAVPVGRALGYAL 1160
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 120/268 (44%), Gaps = 43/268 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ D F G G + + G K +VE+ S A + N E V NLV +
Sbjct: 745 LRTFDPFGGVGAFGLAMEELGCMKLTHAVEITPSAALTLRKNSPETVVFNQCSNLVFQYA 804
Query: 178 LKGHTQHKGVS--------------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
+K H + S P ++D IVAG PCQ SQLN ++ + K
Sbjct: 805 VKYHAGNLSSSDMVRDLHDNTPIGKPPCPGDIDCIVAGFPCQPHSQLNMFKK--ANDRKT 862
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFN---------------KNEILQCIFHCLLKM 268
L+ LS+ D +PKY ENV G + K L+ + LL M
Sbjct: 863 NLILNLLSWVDFLRPKYCFFENVRGFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLLAM 922
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLH----------AFSNQLFT 318
YQV F +LQ+G+YG Q+R R ++A++ GY LP PQP H FS L
Sbjct: 923 GYQVRFGLLQAGHYGTPQARVRFFLVAAQIGYPLPKLPQPTHDFPLQDGLEIKFSPDLPP 982
Query: 319 INGNLVANKTSHAPYRSITVRDAISDLP 346
I L AN T AP++ ++ ++AI DLP
Sbjct: 983 IRPILTANGT--APFKFVSTKEAIEDLP 1008
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 502 WSLVHTAS---RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYA 558
W H S R+ G+ GRL D+ F T VT +P KQ +++HP R+LTVRE A
Sbjct: 1120 WQSAHPTSAMARDGFRPGMYGRLDEDKWFHTTVTNVSPTAKQSRVIHPTSKRILTVRELA 1179
Query: 559 RAQGFPDSYVFR---GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R+QGFPD +VF G + + + IGNAVP P++ A+ E+ + +
Sbjct: 1180 RSQGFPDWFVFHAVDGNVKTLQRHIGNAVPWPVSVALARELREAL 1224
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 45/324 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K +DLF+G GGL G G C +++++ A+Y N+ +I D V S L
Sbjct: 4 KIIDLFAGAGGLTTGFDMEGFESLC-AIDIDAKALATYKHNYPNTKIIHQDIRQVNPSDL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + L Q+ E+ +++ GPPCQGFS+ A + +N L TFL F + F+P
Sbjct: 63 R-----LALGLRQE-ELTVLIGGPPCQGFSRNTPAGYRYLNDSRNQLYRTFLEFVEEFRP 116
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
Y ++ENV ++ + + I L + Y+V L + +YG+ Q+R+R LAS
Sbjct: 117 LYAVIENVPEILKAYNGVVREEITKQLESLGYKVISSSLNAAHYGIPQTRSRAFFLASLD 176
Query: 299 GYKLPSFPQPLHAFS-----------NQLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
FP+P + NQL + N +P +TVRDAI DLP
Sbjct: 177 NSL--HFPEPTNFGDIRSDYRTMKSCNQLNLLEANF-------SPL--VTVRDAIGDLPP 225
Query: 348 VSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
+ G + ++ + P+T +Q M+++ S L+ + +H+ + LSP+ R R++
Sbjct: 226 LDAGQDYGEEVYPDAPQTTYQAMIRNKS--------LK--IVNHVARALSPIQLARARVL 275
Query: 406 PSFPNADWRDLPNICVKLPRGQHS 429
D RDLP C P+ +S
Sbjct: 276 GE--GQDARDLP--CELAPKKHYS 295
>gi|1709158|sp|P50192.1|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName:
Full=Cytosine-specific methyltransferase HphIA; AltName:
Full=M.Hphi(C)
gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus parahaemolyticus]
Length = 372
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 128/277 (46%), Gaps = 38/277 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG GG G +AG + SVE+E +Y ANF + V+Q D +
Sbjct: 45 LTYIDLFSGAGGFSLGFDRAGFHQ-LLSVEIEPHYCDTYRANFPDHQVLQQDLTTLSDDN 103
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L H H+ +VD+++ GPPCQGFS + +N L F+ L Q
Sbjct: 104 LLRHINHR--------KVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVRVVKLTQ 155
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ ++ENV L N + I ++ Y+V VL + ++GV Q R+R+V + K
Sbjct: 156 PKFFVMENVARLFTHNSGKTRAEITEQFERLGYKVKCKVLNAADFGVPQLRSRIVFIGRK 215
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G ++ +FP+P SH Y TV DAI P+++ G N +
Sbjct: 216 DGGEI-TFPEP--------------------SHTEYN--TVGDAIGHFPKLNAGENSLIL 252
Query: 358 HNPPKTHFQRMM------KDGSRIHDIHINLRELLQD 388
++ H +M+ K+G +DI +LR + D
Sbjct: 253 NHEAMNHSTQMLEKMSFVKNGGDRNDIPESLRPISGD 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
K+ H EQ+R LTVRE A Q FPD +VF G +Q+GNAVPP LA+AI ++K
Sbjct: 311 KVFHYEQNRALTVRELAALQSFPDDFVFLGKKIAQQQQVGNAVPPLLAQAIAEAVLK 367
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 120/257 (46%), Gaps = 34/257 (13%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ G G K +SVE +R A +Y NF +I D + + +K
Sbjct: 6 IDLFSGAGGMSLGFDLEGF-KNVFSVEYDRQTAQTYRYNFPNHVLINKDIQEISTNEIK- 63
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ + VD+I+ GPPCQGFS + +N L +L F + +PK
Sbjct: 64 -------KIINNNTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILKPKI 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I+ENV LV NK + ++ I + K+ YQV +++LQ+ +Y + Q R RV I+ GY
Sbjct: 117 FIIENVARLVSHNKGKTIREIQDSIKKLGYQVKYEILQTSDYNIPQKRQRVFIV----GY 172
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
K F P R +T+++AISDLP ++ G + ++
Sbjct: 173 KNIEFNYP---------------------EKLKRKVTIKEAISDLPPLNSGEKSKIPNHF 211
Query: 361 PKTHFQRMMKDGSRIHD 377
H Q M+ S I D
Sbjct: 212 AMKHSQEMLYKMSFISD 228
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
K+ H Q+R LT RE AR Q FPD ++F+G ++ +QIGNAVPP LAK I Y++
Sbjct: 267 KVFHYSQNRALTSRELARIQTFPDDFIFKGTSINVQQQIGNAVPPKLAKLIAYQV 321
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 18/270 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAAS--YDANFQECSVIQDDCNLVLKSLL 178
+DLF G GG G + + L++ + A+ +D N + V+ D + K
Sbjct: 2 IDLFCGTGGFTYGFETHPSDQFEVLLGLDKKDVATETFDRNHPKAEVVNGD---IRKWTP 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ TQH GV +VD+IV GPPCQGFS + R + +NGL F+ + ++P
Sbjct: 59 ERTTQHTGV---YPDDVDVIVGGPPCQGFSSIRPDRGDDVEDERNGLYSDFIEYVSHYEP 115
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV GL + + I + Y + +L N+G+ Q R R++++ +
Sbjct: 116 DFFIMENVVGLATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAAD 175
Query: 299 GYKLPSFPQPLHAFSN---------QLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
+ FP+P H + ++ T L + + A + T+ DAI DLP++
Sbjct: 176 EQDI-EFPEPTHQANGRTIGYRDKTKVITTQPTLSNFRDAEALPEARTIMDAIGDLPKLE 234
Query: 350 QGANCYLFHNPPKTHFQRMMKDGSRIHDIH 379
G + PP+ +Q ++ GS +H
Sbjct: 235 AGEEAIEYTEPPQNRYQAALRQGSERLTLH 264
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
K +HP QDR LT RE AR Q FPD++ F G D+ +QIGNAVPP L + + ++
Sbjct: 335 KCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQIGNAVPPLLGRVLAEHVV 390
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 162/400 (40%), Gaps = 100/400 (25%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYD----------------- 157
++ L ++LFSG GGL G+ +G + ++VE S A +Y
Sbjct: 791 NSKLIGMELFSGAGGLGLGIDMSGFVETKYAVEFSPSAAKTYKCRETYFLCIFYAYLFTR 850
Query: 158 ANFQECSVIQDDCNLVLKS------------LLKGHTQHKGVSLPQKH-EVDLIVAGPPC 204
N + V D + +L+ LL + +PQK +VD I GPPC
Sbjct: 851 TNNPDVLVYNQDSSTLLQQALAKDNGKNPPPLLSKDGKTHCPEMPQKGCQVDFIFGGPPC 910
Query: 205 QGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN-----KNEILQ 259
Q FS N R+ K+ +++ L + LS+ + + P Y +LENV GL+ N ++Q
Sbjct: 911 QSFSLANHHRK--KNDIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSHTLQDGRTNTVVQ 968
Query: 260 C-----IFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN 314
I L + YQ+ + +LQ+ +YG Q R+RV+ +K G LP FP P HAF
Sbjct: 969 AGMVKFICRTSLALGYQIHYKLLQASHYGTPQGRSRVIFWGAKQGLVLPQFPLPSHAFEG 1028
Query: 315 QL----FTINGN--------LVANKTSHAPYRSITVRDAISDL------------PRVS- 349
+L G+ + + +AP + I V DAI DL PR S
Sbjct: 1029 RLACPSLPTGGHIPPPSRSKISGDYHQYAPLKPILVDDAIGDLPPFEWTNPHQVIPRTSS 1088
Query: 350 --------------------QGANCYLFHNP-----------PKTHFQRMMKDGSRIHDI 378
QG +F NP P+ +Q+ ++ G + D
Sbjct: 1089 QKDKRRSLKTPIPQFDAVLLQGNKGTIFSNPGFPEGVPYMSGPQNRYQKWLRQG--MVDE 1146
Query: 379 HINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
+ +QDH S + +P P AD + LP
Sbjct: 1147 ESDTESEVQDHFTSRFSAFLIEASVTVPLRPYADHKALPT 1186
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
A R GR+ D F +T +P K +LHP Q R++++RE AR+QGFPD +
Sbjct: 1195 AGRKQWKHSFYGRMDGDGQFKCTMTRASPNLKNSWLLHPHQKRMISIRECARSQGFPDGF 1254
Query: 568 VFRGG-------ICDMYKQIGNAVPPPLAKAIGYEI 596
+F + D +QIGNAV P A A+G E+
Sbjct: 1255 IFESSNEHPQRVVADKMRQIGNAVAVPFALALGKEL 1290
>gi|346973695|gb|EGY17147.1| modification methylase AgeI [Verticillium dahliae VdLs.17]
Length = 1411
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 29/275 (10%)
Query: 102 HSKEFLPKFPMPLD-----TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASY 156
H + F F +D T L+ DLF G G GL ++G + W+ ++ +Y
Sbjct: 765 HERPFPKTFRQGMDPSEGFTKLQGFDLFCGGGNFGRGLEESGAVEMRWANDINMRAIHTY 824
Query: 157 DANFQECS-------VIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQ 209
AN + S I D L L+ + +P EVD + G PC GFS+
Sbjct: 825 MANLDDPSRVSPFAGSIDDLARLALEGRFASN-------VPAVGEVDFVSGGSPCPGFSR 877
Query: 210 LNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKN--EILQCIFHC-LL 266
L + + LV F SF D+++PKY +LENV ++ K E + C C ++
Sbjct: 878 LTVDKTTPNQRKNQSLVAAFASFIDMYRPKYGLLENVVEIIQGRKTREEDVFCQLICAIV 937
Query: 267 KMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP----QPLHAFSNQLFTI-NG 321
M YQ F +L + +G QSR+R+ + + PG +LP P +PL S L + NG
Sbjct: 938 GMGYQTHFFLLDAWTFGSPQSRSRIFLAFAAPGLRLPEVPMQSHRPLAMRSRSLGLLSNG 997
Query: 322 NLVANKT-SHAPYRSITVRDAISDLPRVSQG-ANC 354
+ KT + + S+T R A++DLP ++ A+C
Sbjct: 998 EPMLRKTFTPTAFASVTARQALADLPDIADAKADC 1032
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 503 SLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGK-ILHPEQDRVLTVREYARAQ 561
SL A R GRL D TI T P+P + G+ +LH Q+R+LTV E RAQ
Sbjct: 1082 SLYPQAQRQGPSSKAFGRLRPDRLMGTITTKPSPSDGYGRAVLHWAQNRILTVMEARRAQ 1141
Query: 562 GFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
GF D V G + +K +GN+V ++ A+G
Sbjct: 1142 GFRDHEVILGTPAEQWKTVGNSVAREVSLALG 1173
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
Length = 398
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 161/348 (46%), Gaps = 38/348 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+G GGL EGL +AG ++ E+ A +Y N V +D
Sbjct: 9 LISIDLFAGAGGLSEGLEEAGFHT-LFASEIVPQYAETYARNHPSAKVCVEDIRKTDPER 67
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
++ + + L +K ++DL+ GPPCQGFS R E + N L +L + D FQ
Sbjct: 68 VR-----RELGL-EKGQLDLVAGGPPCQGFSINAPVRSNEDPR--NHLFREYLRYVDAFQ 119
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ I++ENV GLV F L I L + Y +L + YGV Q R R +IL +
Sbjct: 120 PRAILIENVPGLVSFEHGGTLHAILDALADLGYGADVHILGAPYYGVPQMRWRTIILGLR 179
Query: 298 PGYKLP--SFPQPL-HA--FSNQLFTINGNLVANKTS---HAPYRSITVRDAISDLPRV- 348
G +P ++P+P HA +N T +G + + S AP+ T+R+AI DLP +
Sbjct: 180 -GAVIPQSAWPEPTRHAPVRANFTTTFDGRQIVKQPSPETDAPF--TTLREAIGDLPSLQ 236
Query: 349 --SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
+G + P+ +QR ++ GS I + +H LS + R+ I
Sbjct: 237 NGERGEAVKEYPVRPQCDYQRALRRGS------IG----VLNHEAPRLSAINMQRLNYIQ 286
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCT 454
+W D+P+ LP+G K + + + + D SS+ T
Sbjct: 287 Q--GGNWTDIPDEL--LPKGMRK-ARKSDHTKRYGRPMWDGLSSTILT 329
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+R ++ GR WD TI+T +P G HP+Q+R TVRE AR Q FPD YV
Sbjct: 306 ARKSDHTKRYGRPMWDGLSSTILTKCDP--HWGAFFHPDQNRAFTVREAARIQSFPDHYV 363
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
F G + Y Q+GNAVPP LA A+G + + A
Sbjct: 364 FTGSQAEQYAQVGNAVPPLLALAVGTSLSAVLKEA 398
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 77/360 (21%)
Query: 117 PLKCLDLFSGCGGLMEGLCQ-AGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PLK LD+F+G G +GL + +G + ++E+ S A + N + VI N V +
Sbjct: 756 PLKTLDVFAGVLGYSKGLSEGSGCMEITHAIEISPSAAQTAKRNSPKTVVINQCANAVFQ 815
Query: 176 SLLKGH-------------TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
K H ++ K SLP D+IV G PCQ S LN ++ S +K
Sbjct: 816 YAKKSHEGFQVAPPVQLWDSKEKIPSLPPPGSFDVIVIGFPCQAHSALNMYKK--ASDVK 873
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE---------------ILQCIFHCLLK 267
N LV +S+ + + LENV G + N L+ + LL
Sbjct: 874 NNLVLNAISYIQYMGARIVYLENVMGFMRTPLNARQASPYKVQGGIEMGALKVLIRALLD 933
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNL---- 323
M YQ+ F LQ+G+YG Q R R +++A+ PG +LP PQP HAF + + +
Sbjct: 934 MGYQLRFAALQAGHYGTPQGRERFILVAALPGTQLPELPQPTHAFPSTQLGLKLHYGGEE 993
Query: 324 -----VANKTSHAPYRSITVRDAISDL-------------PRVS--------------QG 351
+ AP+ +T D+I DL PR+ +
Sbjct: 994 KLIKPIRTAPGTAPHHPVTTEDSIGDLAPFDWVAPGARARPRMDEKGRPVKVIVCDNRES 1053
Query: 352 ANCYL-----FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
C + +H P+T +Q M+ ++ + L +L H K P + R+ IP
Sbjct: 1054 KTCGVDEDEPYHTKPRTRYQMEMR---QVRESTRPLSDL--QHFTKAFKPEVVRRVTKIP 1108
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD-MY 577
R++ F TIVT +P KQ ++H +R+L++RE ARAQGFPD +VF + ++
Sbjct: 1126 ARVSRKGFFHTIVTNISPTAKQSSVIHYIDNRILSIRELARAQGFPDDFVFVANKVETIH 1185
Query: 578 KQIGNAVPPPLAKAIGYEIIKC 599
+ IGNAVP PL KA+G E+ K
Sbjct: 1186 RLIGNAVPIPLGKALGRELRKA 1207
>gi|428776676|ref|YP_007168463.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690955|gb|AFZ44249.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 430
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 24/233 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLL 178
+DLF+G GG+ G QAG SVE++ A+++ NF SVI QD +L + +
Sbjct: 11 AVDLFAGVGGITLGFEQAGF-DVLASVEIDPIHCAAHEFNFPFWSVICQDVKHLTGQKIR 69
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ SL + E+D++ GPPCQGFS + + R LE + N LVF FL +P
Sbjct: 70 QS-------SLIKDQEIDVVCGGPPCQGFSLIGK-RVLEDER--NALVFHFLRLVLELKP 119
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNY--QVTFDVLQSGNYGVAQSRNRVVILAS 296
KY ++ENV G+ ++L + K +Y Q+ + VL + N+GV Q+RNR+ +L
Sbjct: 120 KYFVMENVAGMAIGKSQQLLNELIEKFQKNDYKVQLPYQVLNASNFGVPQNRNRLFLLGC 179
Query: 297 KPGYKLPSFPQPL-HAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
+ LP +P P+ +Q +ING H P S TV+DA+ DLP +
Sbjct: 180 RSDQTLPDYPIPITQPAKSQANSING--------HQP-DSPTVKDALIDLPLI 223
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 324 TSPRPI-------HPHLPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 376
Query: 592 IGYEIIKCIG 601
+ EIIK +G
Sbjct: 377 VATEIIKVLG 386
>gi|428319250|ref|YP_007117132.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428242930|gb|AFZ08716.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 420
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 28/236 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF CS++ D + L
Sbjct: 11 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHEFNFPLCSILCKDV-----TALT 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G K +L ++ E+D++++G PCQGFS + + R+++ + N L+F F +PK
Sbjct: 65 GSEIRKKSALGRR-EIDVVISGSPCQGFSMMGK-RDVDDPR--NSLIFHFQRLVLELKPK 120
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ E+L + LK Y+V + VL + NYGV Q+R R+ ++ K
Sbjct: 121 FFVMENVPGIASGEHKELLNILISSFLKCGYKVEENYQVLNAVNYGVPQARKRLFLIGCK 180
Query: 298 PGYKLPSFPQ-----PLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
GY+LP +PQ P + IN V TV DAI DLP V
Sbjct: 181 EGYELPKYPQQTTILPKIKIPKRYKKINLPAVP-----------TVWDAIGDLPDV 225
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 326 TSPRPI-------HPIAPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 378
Query: 592 IGYEIIKCIGN-AVPPPLAKAIG 613
+ +II +G A+ P L G
Sbjct: 379 VAAQIISALGVIAIKPSLKLTWG 401
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K +DLF+G GG+ EG QAG + ++E + A ++ N + V D +
Sbjct: 3 KIVDLFAGAGGMTEGFEQAGY-QSALAIEYDEMAAKTFSFNHPQTPVFIKDIRTI----- 56
Query: 179 KGHTQHKGVSLPQKHE-VDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
Q + V K+ +D++ GPPCQGFS A + +N L F+ +L
Sbjct: 57 ----QEESVREALKYSPIDVLCGGPPCQGFSL---AGKRLTDDPRNQLFLEFVRMVNLIN 109
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P++ + ENV+G+ + IL+ I Y+ F VL + +YGV Q+R R ++ ++
Sbjct: 110 PRFFVFENVSGITSMSGGAILEAILQEFRTSGYECFFKVLNAADYGVPQARPRFFLIGTR 169
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G K +FP P HA + ++N ++N H + V DA+SDLP + QG
Sbjct: 170 DGEKY-NFPDPSHAPT----SVNDLFLSNMPRH-----LNVWDALSDLPYIEQGEGSEEM 219
Query: 358 HNPPKTH 364
N + H
Sbjct: 220 KNSTQAH 226
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK------QIGNAVPPPLAKA 591
N + +LHP R TVRE AR Q F D Y F G + K Q+GNAVPP LA+A
Sbjct: 296 NHRTDLLHPVIPRGTTVREAARLQSFDDDYKFFGNLTRKAKWVTQDDQVGNAVPPLLARA 355
Query: 592 IGYEII 597
I ++
Sbjct: 356 IAKSLL 361
>gi|428219918|ref|YP_007083390.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992261|gb|AFY71954.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 409
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
C+DLF+GCGG+ GL ++G C VEL+R A + ANF ++++ D ++K
Sbjct: 4 CIDLFAGCGGMALGLKRSGFNHACL-VELDRQAAQTLRANFDPATIVEAD---IIK---- 55
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+G + ++DL+ AGPPCQ FS R L+ + + LV+ L+ + QPK
Sbjct: 56 --LNREGYFAQFREQIDLLSAGPPCQSFSYAGNQRGLDDRRGQ--LVYETLNTIEQVQPK 111
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV L N ++L+ I L + Y+ + +L + +YGVAQ+R R++ILA++ G
Sbjct: 112 MVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQILNANDYGVAQNRQRLIILATRKG 171
Query: 300 YKL 302
+++
Sbjct: 172 WRI 174
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 95/209 (45%), Gaps = 39/209 (18%)
Query: 397 LMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSK 456
+ + R RLI WR +KL Y K Y + ++ DC +S
Sbjct: 156 VAQNRQRLIILATRKGWR------IKL-----KYPTKYAYKPVLRDALQDCPTSDGVQYS 204
Query: 457 GQKNTIIPWSLVHTASRNNNWQGV---LGRLAWDESFDMTGQKNTIIPWSLVHTASRNNN 513
+K ++ LV WQ + L + +SFD G K
Sbjct: 205 SEKARVL--DLVPPGG---CWQALPVELQKQYMGKSFDTEGGK----------------- 242
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
+G+ RLAW E T++ +P KQ + HP+ R LTVREYAR QGFPDS+VF G
Sbjct: 243 -RGMARRLAWHEPSLTLLCSP--AQKQTERCHPDHTRPLTVREYARIQGFPDSFVFTGST 299
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Y+QIGNAVP LA+AIG II+ I
Sbjct: 300 YSRYRQIGNAVPVDLAEAIGKSIIRVIAG 328
>gi|440636281|gb|ELR06200.1| hypothetical protein GMDG_07855 [Geomyces destructans 20631-21]
Length = 1529
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 165/373 (44%), Gaps = 37/373 (9%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEY 75
+GD + L ++ SID + + V F S+ +I++ E + Y
Sbjct: 628 IGDDTPARPNELVYSDDMASIDADEVYRRCFVRFY----SQSQIINKE-------VPAPY 676
Query: 76 YRK-TKDKHFVQPNARPLELAYILKIIHS--------KEFLPKFPMPLDTPLKCLDLFSG 126
R T D ++ L+ LK I S + F P P P L+ LD+F G
Sbjct: 677 CRDGTGDMFYIASRLVRLDDKNHLKEIDSTSRPQSLIQGFDPTQPPPFRR-LRGLDMFCG 735
Query: 127 CGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQH-- 184
G GL +AG K +V++ + A+Y AN ++ + Q C V L+K + +
Sbjct: 736 GGNFGRGLEEAGAIKFTHAVDMAPNAIATYYANTEDPTTTQFFCGSVDDMLIKALSGNVE 795
Query: 185 KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILE 244
+ +P ++D I AG PC G+S LN ++ + L+ S D ++PKY +LE
Sbjct: 796 GALEIPLPGDIDFIAAGSPCVGYSILNPNKDSAQGLKNQSLIADVASMIDFYRPKYALLE 855
Query: 245 NVTGLVHFNK---NEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
NV + K ++ L + C++ M YQ+ VL + ++G Q R+R+ + + PG+K
Sbjct: 856 NVLTMAQKGKGRNHDSLSQLICCIVGMGYQLQVYVLDAWSFGSPQGRSRLFVSVAAPGFK 915
Query: 302 LPSFPQPLHAFSNQLFTINGNLVANKTS-------HAPYRSITVRDAISDLPRVSQG--A 352
LP P H+ N +AN + P++ ++ +A LP + G
Sbjct: 916 LPPRPDCSHSHPNGTSDRGLGTMANGKAFGERLFVETPFKFVSAAEATEHLPDIGDGHPG 975
Query: 353 NC--YLFHNPPKT 363
+C Y H P ++
Sbjct: 976 HCSQYPDHRPSRS 988
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 517 VLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
GR+ F TIVT +P N + G++LH Q R+LT+ E AQGF G +
Sbjct: 1048 AYGRIVPTSLFSTIVTNCSPENARSGRVLHWSQPRLLTIEEAKIAQGFVQGDALTGTRGE 1107
Query: 576 MYKQIGNAVPPPLAKAIG 593
YK GN+V +A A G
Sbjct: 1108 QYKIAGNSVARTVALAQG 1125
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K +DLF G GGL EG QAG + ++ + E A+Y N + D V
Sbjct: 1 MKTIDLFCGAGGLGEGFRQAGFSA-LYANDHETPALATYKENHPDAVCSTDSIETVDPKK 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
++ + GV+ Q VD+++ GPPCQGFS + R+ +N L + F + F+
Sbjct: 60 IR---EDLGVAPGQ---VDVVMGGPPCQGFSTYGQRRD---DDARNQLYVPYFGFVEEFR 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV GL+ + +L + + Y L + YGV Q R RV I +
Sbjct: 111 PKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGAA 170
Query: 298 PGYKLPSFPQPLHA---FSNQLFTINGNLVANKTSHAPYRSITVRDAISDL------PRV 348
G ++ PQP H S + +L + S P ++TVRDAISDL PR
Sbjct: 171 DGQRIDP-PQPSHVNGKRSGVVLNDQPSLFFDGPSIQP--ALTVRDAISDLPDEVLVPRD 227
Query: 349 SQGANCYLFHNPPKTHFQRMMKDGS 373
+Q Y PPKT +QR+M+ S
Sbjct: 228 TQKPMEY--PEPPKTEYQRLMRGNS 250
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WD T+V + +HP DR ++VRE AR Q FPD+Y F G ++Q
Sbjct: 350 RLRWDAPSHTVVA--HMARDCSDFVHPGIDRFVSVREAARFQSFPDTYRFPGSQFRQFRQ 407
Query: 580 IGNAVPPPLAKAIGYEIIKC 599
IGNAVPP L +A+ E IK
Sbjct: 408 IGNAVPPLLGRAMA-ETIKV 426
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 148/339 (43%), Gaps = 44/339 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKS 176
+ +DLF G GGL EG QAG +R+ ++ A E I ++ +
Sbjct: 7 MTVIDLFCGAGGLSEGFRQAGFHVLAGQDYDDRA-GETFSATHPEAKFIGGPIQDVTAQQ 65
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
LLK KG E+D+IV GPPCQG+S N R + + GL +L
Sbjct: 66 LLKAAGVKKG-------EIDVIVGGPPCQGYSVYNHQRGVNDPRA--GLFREYLRIVKGI 116
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QP++I++ENVTG+ I+ IF + + Y+V VL++ YGV Q R RV +A+
Sbjct: 117 QPRWIVMENVTGITSIGGGGIVHEIFEGMKSLGYRVDMKVLRAEEYGVPQERRRVFFIAT 176
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG--ANC 354
+ + FP+ H F +TV DAISDLP++ G A
Sbjct: 177 RTDAPI-LFPEQTHGPGLLPF------------------VTVWDAISDLPKLENGDRAGP 217
Query: 355 YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
+ P+ +Q +++ I +Q+H LS + + R+R IP+ WR
Sbjct: 218 RPYGKRPQNSYQALLRGDCTI----------VQNHSASRLSRINQERMRHIPA--GGSWR 265
Query: 415 DLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSC 453
D+P + ++ K + KK+ C + C
Sbjct: 266 DIPIDLLPAGMKLAKRSDHTKRYGRPKKTDLSCTVLTKC 304
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
G +HP QDR TVRE AR Q FPD + F+G + Y Q+GNAVPP L K + ++
Sbjct: 309 GAYIHPVQDRSFTVREAARLQSFPDFFTFKGNSTEQYVQVGNAVPPLLGKCVAEALL 365
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1392
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 20/275 (7%)
Query: 106 FLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE--- 162
F P+ P+ L LDLF G G GL + G W+V+L + +Y N ++
Sbjct: 642 FDPEAPLERRV-LNGLDLFCGGGNFGRGLEEGGAVHNKWAVDLFSAAVQTYSTNLKDPEG 700
Query: 163 CSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
+ N +L +G+ Q +P +VD+I+AG PCQGFS++N + ++S
Sbjct: 701 TDMFFGSVNDLLVQAFEGNPQK--FRIPSPGDVDVILAGSPCQGFSRMNMNKGNDQSLRN 758
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVH---FNKNEILQCIFHCLLKMNYQVTFDVLQS 279
LV + ++ D ++PKY +LENV + + +IL + ++ + YQV +L S
Sbjct: 759 QSLVASVAAYIDFYRPKYGLLENVLTMAQKGLGREEDILSQLICTIVGLGYQVQLFLLDS 818
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHA-------P 332
++G +Q+R+R+ + + PG+ P+ H+ + +AN S P
Sbjct: 819 WSFGSSQARSRIFVSFAAPGFVPLKHPELSHSHPPHVGERGLGKLANGQSFGSRIHCPTP 878
Query: 333 YRSITVRDAISDLPRVSQGANC----YLFHNPPKT 363
+ +T D+I+DLP + GA Y H P+T
Sbjct: 879 FNYLTAEDSIADLPYIGDGATSQCTKYPDHVTPQT 913
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 GRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ F TI+ T N ++ G LH +Q R LT+ E RAQ FPD V G +
Sbjct: 974 GRVKPRGLFPTILVTINLEDSRMGNSLHWDQQRRLTIMELRRAQSFPDDEVLVGTRGEQM 1033
Query: 578 KQIGNAVPPPLAKAIGYEI 596
K IGN+V ++ A+G +
Sbjct: 1034 KIIGNSVDRSVSMALGISL 1052
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 124/284 (43%), Gaps = 54/284 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDA--NFQECSVIQDDCNLVLK 175
L L+LF G G G + G+ +V ++ S A A NF + ++ D N +L
Sbjct: 359 LSHLELFGGIGSFSLGFSEHGLTDQKRTVFIDWSVPACETASINFPKSTIFCADVNEILC 418
Query: 176 SLLKGHTQHKGVS--------------LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
++ G T+ S LP+ + D+I AG PC S LN R+ E SK
Sbjct: 419 LMITGKTRQGKSSVRDLRTGLQIFPDQLPKPGDFDIITAGFPCGSHSTLNVLRKGEDSK- 477
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLV--HFNKNEILQCIFHCLLKM--------NYQ 271
N L T LSF + +P Y+ ENV GL+ E + + H L++ +YQ
Sbjct: 478 -NALCGTALSFIEFLKPTYVYFENVRGLLKTQLVDRETQEILTHAFLRLMCGTMITLDYQ 536
Query: 272 VTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNL-------- 323
+ F VLQ+ YG Q R R ++ A K GY LP+ P P H F +GNL
Sbjct: 537 LRFGVLQAAQYGTPQERRRFILTAVKRGYTLPNLPDPTH------FYPDGNLQIKLPDQN 590
Query: 324 -----VANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPK 362
+ S IT+ D ISDLP C+ + NP K
Sbjct: 591 KIFMDFRTRYSRGTLDPITIGDTISDLP-------CFEYRNPMK 627
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLN--KQGKILHPEQDRVLTVREYARAQGF 563
T + +++G GRL+ F T++TT +P N + G++LHP Q RVLTV E RAQGF
Sbjct: 752 QTKDYSRDYEGNFGRLSPHLLFRTVITTMDPRNQGRTGQVLHPSQHRVLTVLEAQRAQGF 811
Query: 564 PDSYVFRG---GICDMYKQIGNAVPPPLAKAIGY 594
PD +V G+ +YKQIGN++P P+ +++ +
Sbjct: 812 PDWFVLSNKSEGVKGLYKQIGNSIPLPITRSLAF 845
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 17/267 (6%)
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVF 227
C +K ++ + + LP K VD+I GPPCQG S NR R KN +
Sbjct: 506 CQERIKDFVQNGYKKNILPLPGK--VDVICGGPPCQGISGFNRFRNYNAPLEDPKNQQMV 563
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
F+ D +PKY+++ENV ++ F +L+ L+ MNYQ ++ +G YG+ Q
Sbjct: 564 VFMDIVDFLKPKYVLMENVVDILKFAHGFLLRYALSRLVAMNYQARLGMMVAGCYGLPQF 623
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---GNLVA-NKTSHAPY-RSITVRDAI 342
R RV + + P LP FP P H + N N+VA ++ H R++ + DAI
Sbjct: 624 RMRVFLWGACPTEILPQFPLPTHDVVVRGGAPNEFEQNIVAYDENQHRQLERALLLEDAI 683
Query: 343 SDLPRVSQGA--NCYLFHNPPKTHFQ---RMMKD---GSRIHDIHINLRELLQDHICKIL 394
SDLP+V + + PP+T FQ R+ ++ S ++ + +L DH L
Sbjct: 684 SDLPQVGNNEMRDEMPYGRPPRTEFQHFIRLTREELVNSASGAGRLSQKAILFDHRPLQL 743
Query: 395 SPLMEMRIRLIPSFPNADWRDLPNICV 421
+ +R+ IP A++RDLP + V
Sbjct: 744 NEDDYLRVCRIPKKKGANFRDLPGVKV 770
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WDE+ T+VT P N+ +LHPEQDRVL++RE AR QGFPD Y RG + + Y
Sbjct: 810 FGRLWWDETVPTVVTRAEPHNQ--ALLHPEQDRVLSIRENARLQGFPDFYRLRGPVKERY 867
Query: 578 KQIGNAVPPPLAKAIGYEI 596
Q+GNAV P+A+A+GY +
Sbjct: 868 IQVGNAVAVPVARALGYSM 886
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 126/282 (44%), Gaps = 58/282 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAG-VAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L+ LD+F G G GL K +E S A + ANF V N VL+
Sbjct: 697 LRVLDVFGGVGAFSMGLADGSRCMKLTHLIEKSPSAAKTVIANFSGVQVYNQCANTVLEY 756
Query: 177 LLKGHTQHKGVSLP----------------------QKHEVDLIVAGPPCQGFSQLNRAR 214
++K +H V+LP + ++D++VAG PCQ S LNR R
Sbjct: 757 MVK---RHDKVTLPSGDPVPAPMQIYDANIACPPPIKPGDIDVVVAGFPCQSHSLLNRFR 813
Query: 215 ELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFN----------------KNEIL 258
+ K N L++ LS+ +PK++ ENV G + +N K +
Sbjct: 814 RIGDKK--NNLIWNALSWVGFLKPKFVFFENVPGFLQYNLLPRQVSANRLEGGIEKGGLK 871
Query: 259 QCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---- 314
C+ L +M YQ+ F ++Q+G+YG Q R R ++A+K G LP PQP H F+
Sbjct: 872 LCV-RALAEMGYQLRFCLMQAGHYGAPQHRVRFFVVAAKQGVPLPDLPQPTHDFTTIAKQ 930
Query: 315 ---QLFTINGNL------VANKTSHAPYRSITVRDAISDLPR 347
++ N + + AP++++TV DAI DL R
Sbjct: 931 YERLTLVLSKNTDTTIRPINTQNGVAPFKAVTVADAIDDLKR 972
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF----RGGIC 574
GRL D F I T P KQG++LH R++TVRE ARAQGFPD ++F I
Sbjct: 1080 GRLHPDGFFPAITTNIGPTAKQGRVLHYSCGRIVTVRELARAQGFPDWFIFERLEEDDIL 1139
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIKC 599
+++QIGNAVP PL +A+G E+ +
Sbjct: 1140 TIHRQIGNAVPLPLGRALGRELRRA 1164
>gi|228964036|ref|ZP_04125166.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402562017|ref|YP_006604741.1| DNA (cytosine-5-)-methyltransferase [Bacillus thuringiensis HD-771]
gi|228795688|gb|EEM43165.1| hypothetical protein bthur0004_8960 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401790669|gb|AFQ16708.1| DNA (cytosine-5-)-methyltransferase [Bacillus thuringiensis HD-771]
Length = 478
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 214/521 (41%), Gaps = 95/521 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF+G GG G QA + + + + S D + + C + + +L K ++
Sbjct: 5 KVLDLFAGGGGFSTGFLQAKYQENEFDI------SKSLDIDKEACKTLSN--HLSEKRVV 56
Query: 179 KGHTQHKGVS---LPQKHEVDLIVAGPPCQGFSQLNRAR-------ELEKSKLKNGLVFT 228
G + + +VD+I+ GPPCQ FS AR E KS +N L
Sbjct: 57 NGDITDNRIKEQIFLECEDVDVIIGGPPCQTFSLAGPARSGKQEIREALKSDPRNVLYKH 116
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEI----------------LQCIFHCLLKMNYQV 272
F + +P++++ ENV G+ I L+ I +C +
Sbjct: 117 FFEIVRILKPRFVVFENVEGITSKKIGNIEISEKQQLAIEAICEELKNIGYCTKVKGEES 176
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVAN------ 326
+ VL S ++GV Q R RVVI+A+K G + ++P+ H + + + GN+++
Sbjct: 177 HYRVLNSADFGVPQQRKRVVIIANKHGIE-NTYPKNTHGDTLKPYETVGNVISGLPVVLP 235
Query: 327 KTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELL 386
+ + + + D I D + GA + K + R I L +
Sbjct: 236 QINSSNIEGLKNIDIILDNLSICIGAFVNSINFISKKYSCREEIQSKEF----IELLNFI 291
Query: 387 QDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCD 446
D+ + +++++ +F Y +LK K +K D
Sbjct: 292 NDYFDSKIVNRKRQKLKVLEAFIEG------------------YNSRLKSLYKSEK--ID 331
Query: 447 CKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE------SFDMTGQKNTII 500
K ++ + K ++ +S++ + S ++ + L ++E +D T K+T +
Sbjct: 332 SKLTAHESRKHNIRDLVIFSMMESGSNSSQFMNPNADL-YNEILDNLYPYDKTKHKDTYV 390
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQG-KILHPEQDRVLTVREYAR 559
S +D+ +TI+ + K G K +HP+Q R T E A
Sbjct: 391 KHS-------------------FDKVSNTILAH---MQKDGLKFIHPDQPRTYTPYEAAL 428
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
Q FP Y F GG ++QIGNAVPP LAK IG I++ +
Sbjct: 429 IQSFPTEYDFSGGKNSQFRQIGNAVPPLLAKRIGEVILEAL 469
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 59/296 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD-CNLVLKS 176
+K DLF+G GGL +G +AG + ++E ++ A SY N + V DD CNL K
Sbjct: 1 MKVADLFAGVGGLSQGFIKAGF-EIAIAIEHDKDIAYSYQRNHPQTDVYVDDICNLDFKE 59
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ K H Q +D+++ GPPCQGFSQ + + L + +N L F+ F + F
Sbjct: 60 IHKKHPQ-----------IDVVMGGPPCQGFSQ--KGKRLSINDPRNFLFKQFVRFVEEF 106
Query: 237 QPKYIILENVTGLV----HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+PKY +LENV ++ F +NEI F+ L Y+V VL + ++GV Q R R V
Sbjct: 107 KPKYFVLENVPNIITTANGFFRNEI-NGAFNAL---GYEVCSGVLHAVDFGVPQDRRRAV 162
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQ 350
+ ++ P+P+ + TVRDAI DLP + Q
Sbjct: 163 FIGQLSKLEV-DLPKPIG-----------------------KKNTVRDAIYDLPFIESGQ 198
Query: 351 GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
G + P T Q+ ++ ++ L +H+ SP+ R+ ++P
Sbjct: 199 GEEESTYDKQPTTDLQKDLRGKCKV----------LHNHVATNHSPVALRRMEMVP 244
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 514 WQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G RL +E TI T TP+ G+ HP +R +T RE AR Q FPDS++F
Sbjct: 262 YSGTWCRLLENEVAATITTRYDTPS----SGRFTHPLLNRCITTREAARIQTFPDSFIFY 317
Query: 571 GGICDMYKQIGNAVPPPLAKAIG 593
G KQ+GNAVPP LA AI
Sbjct: 318 GNKTCQMKQVGNAVPPYLAYAIA 340
>gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC
73102]
gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 421
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 122/231 (52%), Gaps = 18/231 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF CSV+ C V+ +
Sbjct: 12 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHEFNFPYCSVL---CQSVVDTT-- 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + S E+D+++ G PCQGFS + + R ++ + N LVF F +PK
Sbjct: 66 -GEEIRSRSKIGDREIDVVICGSPCQGFSLIGK-RVVDDPR--NSLVFHFHRLVFELKPK 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ +ILQ + Y+V + +L + NYGV QSR R+ ++ ++
Sbjct: 122 FFVMENVRGITVGEHKKILQSLISEFKIYGYKVEENYQILNAANYGVPQSRERLFLIGAR 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
+LP +PQP+ + + NL + K S+ P S TV DAI DLP +
Sbjct: 182 EDVELPKYPQPITKPA-----LPNNLTSKKISNIPL-SPTVWDAIKDLPEI 226
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A + + T+P P+ HP R +TVRE AR +PD + F ++Q+G
Sbjct: 317 AGTDKYRGSFTSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVG 369
Query: 582 NAVPPPLAKAIGYEIIKCIG-NAVPPPLAKAIGYE 615
N+VPP LAKA+ EII + + P L +G E
Sbjct: 370 NSVPPLLAKAVAGEIISSLNISPFKPSLRYKLGDE 404
>gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
Length = 422
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 32/260 (12%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A++ NF + I D +++ ++
Sbjct: 8 AIDLFAGVGGMTLGFEQAGF-DVLGSVEIDPIHCAAHHYNFPFWTTICSDISIINAKTIR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+S E+D++ GPPCQGFS + + + +N L+ F+ QPK
Sbjct: 67 N------LSCIGNREIDVVFGGPPCQGFSLIGKRNPKDN---RNNLIKHFIRLVIELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+ N L+ IF + NY++ + +L + NYGV Q R R+ I+ K
Sbjct: 118 YFVIENVPGMATKNNQAFLEEIFDEFIANNYRIETNYKILNAANYGVPQIRKRLFIMGGK 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
LP +PQ L ++ ++ S P+ + TV AI+DLP V+
Sbjct: 178 SDLPLPDYPQFLTNYNQEI-----------NSTIPF-TPTVSQAINDLPEVN-------- 217
Query: 358 HNPPKTHFQRMMKDGSRIHD 377
H P ++ M + S+++D
Sbjct: 218 HYPELSYKDSMKVNSSKLND 237
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 314 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 366
Query: 592 IGYEIIKCI 600
I EI+K +
Sbjct: 367 IAKEILKTL 375
>gi|346322860|gb|EGX92458.1| DNA methyltransferase Dim-2 [Cordyceps militaris CM01]
Length = 1182
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 190/501 (37%), Gaps = 104/501 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L+ LDLF G G GL + G W+ +++ +Y AN ++ S +
Sbjct: 691 LRGLDLFCGGGNFGRGLEEGGSIMMKWANDMDSKAIHTYMANAIDPEQVSPFLGSIDDFQ 750
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ ++G ++P+ EVD I G PC GFS + R + + LV F S D
Sbjct: 751 RLAMQGQFAD---NVPRIGEVDFISGGSPCPGFSTMTNDRTTDPQRKNQSLVAAFASCVD 807
Query: 235 LFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
L++PKY ILENV G++ ++ ++ + L+ M YQ L + + G AQ R+RV
Sbjct: 808 LYRPKYGILENVMGIIQSCRDRDQDVFSQLMCALVGMGYQARLFFLDALSCGSAQMRSRV 867
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH----------APYRSITVRDA 341
I+ + PG+ LP +PL S+ N +L T P+R + A
Sbjct: 868 FIVFAAPGWTLPE--KPLQTHSHPPSVKNASLGRLPTGEPMAKREIAKCTPFRYKSASQA 925
Query: 342 ISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDH--ICKILSPLME 399
+ LP I+D ++ DH + + LM
Sbjct: 926 TAGLP---------------------------TIYDAKPDICVPFPDHRVVSGTNTNLMR 958
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQK 459
R+RLIP FP + + + Y A + +S+ + G+
Sbjct: 959 NRVRLIPKFPYG---------MNFSQAWYGYYGTYPRAAGLGRLTKSERSTFPPSRHGEN 1009
Query: 460 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLG 519
+ S+ A ++G ++V AS + QG
Sbjct: 1010 TKVTSTSIQSNAYGRRLPHQLMG--------------------TIVTAASPTDAKQGRT- 1048
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
+ W+E DR +TV E RAQGF DS + G YK
Sbjct: 1049 -IHWNE-----------------------DRCMTVLEAKRAQGFLDSEIILGTTTTQYKI 1084
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
+GN+V ++ A+G I +
Sbjct: 1085 VGNSVAREVSLALGTVITDAV 1105
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 154/371 (41%), Gaps = 96/371 (25%)
Query: 137 AGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL-----LKGHTQHKGVSLPQ 191
+G +V+ E + +Y N +V+ D N VLK++ +K LP+
Sbjct: 945 SGFVDTALAVDYEPAAVDTYKKNHPYTTVLCADSNKVLKAVRGDKSVKDEYNQPFPPLPK 1004
Query: 192 ------KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILEN 245
+D + GPPCQ FS+ N ++ + +++ L LSF + ++P Y +LEN
Sbjct: 1005 PCTADKSSSIDFVFGGPPCQSFSKANHYKD--PNDIRSFLPLNMLSFVEAYKPDYFLLEN 1062
Query: 246 VTGLVHFN---------------KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
V GL+ F KN +++ I L+ + YQ + VLQ+G +GV Q+R R
Sbjct: 1063 VRGLLDFRLGTTTRGMQDANECIKNSMVKIILRTLIALGYQASVRVLQAGQFGVPQARER 1122
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS---------------HAPYRS 335
V+ L +K G +P P P HAF T N +A+ T+ +AP
Sbjct: 1123 VIFLGAKLGLPMPVHPVPTHAFPKVPNTAN---LADGTTLVPLPRAPNGEKGYIYAPLPP 1179
Query: 336 ITVRDAISDLP-----------------------RVSQGANCYL---------------- 356
+T+ DAI DLP R G +
Sbjct: 1180 VTIEDAIGDLPPFDWVNPHEIFPSSTKDRNECKAREDAGIKQLVATPTSTGLVGFPRPSE 1239
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+H PP+ +Q M+ S +++ R S L+E R+ +P P+AD+R L
Sbjct: 1240 YHCPPQNRYQLQMRRNSPGGVLNMYTR--------TYRSSLVE-RVVTVPLEPDADFRRL 1290
Query: 417 PNICVKLPRGQ 427
P I P GQ
Sbjct: 1291 PEIL--QPGGQ 1299
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGF 563
++ + +G GR F T++T PNP +K +LHP Q R TVRE AR+Q F
Sbjct: 1293 ILQPGGQREKRRGSFGRCGLKGFFATVMTQPNPSSKGTWLLHPTQKRTYTVRECARSQSF 1352
Query: 564 PDSYVF--------RGGICDMYKQIGNAVPPPLAKAIGYEI 596
PD + F + D + GNAVP LAK +G I
Sbjct: 1353 PDDFEFDSKHSKNPETAVNDFCRIGGNAVPIELAKKLGQSI 1393
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V +I GPPCQG S NR R ++ + +N + F+ + +P Y+++ENV
Sbjct: 858 LPLPGCVGVICGGPPCQGISGYNRYRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENV 917
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ +K + + L+ M YQ ++ +G YG++Q R+RV + + P LP FP
Sbjct: 918 VDILRLDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFP 977
Query: 307 QPLHAFSNQL---FTINGNLVA--NKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHN 359
P H + N+VA +++ ++DAISDLP VS + + +
Sbjct: 978 LPTHDVIVRYGLPLEFERNVVAYVEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYES 1037
Query: 360 PPKTHFQRMMKDGSR-----IHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
PP+T FQR ++ R D + LL DH ++ R+ IP A++R
Sbjct: 1038 PPETDFQRYIRSTKRDLTGSATDNSNKRKMLLHDHRPFHINEDDYARVCQIPKRKGANFR 1097
Query: 415 DLPNICVK 422
DLP + V+
Sbjct: 1098 DLPGLIVR 1105
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T++T P ++ +LHPEQDR+LT+RE AR QGFPD + F G I + Y
Sbjct: 1143 FARLWWDETVPTVLTVPTCHSQA--LLHPEQDRMLTIRESARLQGFPDYFQFCGTIKERY 1200
Query: 578 KQIGNAVPPPLAKAIGYEI 596
QIGNAV +++A+GY +
Sbjct: 1201 CQIGNAVAVSVSRALGYSL 1219
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C ++ + + K + LP + V +I GPPCQG S NR R ++ + +N +
Sbjct: 831 NCQDAIREFVTSGFKSKILPLPGR--VGVICGGPPCQGISGYNRHRNVDSPLNDERNQQI 888
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F+ + +P Y+++ENV ++ +K + + L+ M YQ ++ +G YG++Q
Sbjct: 889 IVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQ 948
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQL-----FTINGNLVANKTSHAPYRSITVRDA 341
R+RV + + P LP FP P H + F N A +++ ++DA
Sbjct: 949 FRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDA 1008
Query: 342 ISDLPRVSQGANCYL--FHNPPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKI 393
ISDLP VS + + + PKT FQR ++ GS I + + LL DH
Sbjct: 1009 ISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTM-LLHDHRPFH 1067
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVK 422
++ R+ IP+ A++RDLP I V+
Sbjct: 1068 INEDDYARVCQIPNRKGANFRDLPGIIVR 1096
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T++T P ++ +LHPEQDRVLT+RE AR QGFPD + F G I + Y
Sbjct: 1134 FARLWWDETVPTVLTVPTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERY 1191
Query: 578 KQIGNAVPPPLAKAIGYEI 596
QIGNAV +++A+GY +
Sbjct: 1192 CQIGNAVAVSVSRALGYSL 1210
>gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group]
gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group]
gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group]
Length = 304
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 140/338 (41%), Gaps = 82/338 (24%)
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING-------NLVA--NK 327
+ +G YG+ Q R RV +L KLP FP P H + NG NLV N
Sbjct: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTH----EAIVKNGCPLAFERNLVGWPND 56
Query: 328 TSHAPYRSITVRDAISDLPRVSQGA--NCYLFHNPPKTHFQRMMKD------GSRIHDIH 379
T R I + D +SDLP V+ G + L+ P+T FQR ++ G R H
Sbjct: 57 TPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTK 116
Query: 380 INLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPR-GQHSYTEKLKYNA 438
+ L DH +L RI IP A++RDL + V + T++
Sbjct: 117 DSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLP 176
Query: 439 KKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNT 498
+ V DC A N GR+ WDE
Sbjct: 177 SGRPLVLDCI---------------------LAYENGKSLRPFGRVWWDE---------- 205
Query: 499 IIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYA 558
V+G T++T PN + ++HP QDR+LT+RE A
Sbjct: 206 ------------------VVG---------TVLTVPN--ARMQALIHPAQDRLLTIRESA 236
Query: 559 RAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
R QGFPD+Y FRG + D Y+QIGNAV P+ +A+GY +
Sbjct: 237 RLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 274
>gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 330
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LDLFSG GG G ++G S++ + SY+ NF I D + S
Sbjct: 6 TLDLFSGAGGFSLGFLKSGAFNILLSIDNNPKLSISYEKNFDFIKHINRD----ILSFSD 61
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q L QK+ ++I+ GPPCQGFS + E +N L +L F +PK
Sbjct: 62 KDIQ----KLQQKYNFEVIIGGPPCQGFSLAGKIGRKELQDDRNKLFLAYLKFIKNIKPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
I+ENV L NK + L+ I C +NY+V +++L + +Y +AQ+R+R+ I+ +
Sbjct: 118 IFIMENVASLARHNKGQTLKEILQCFYNINYEVKYEILNTKDYSIAQNRSRIFIVGT--- 174
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHN 359
K SF P S I+++ I DLP++ G + ++
Sbjct: 175 IKKNSFIFPKKENS---------------------QISIKKVIDDLPKLKNGEKSKIPNH 213
Query: 360 PPKTHFQRMMKDGSRIHD 377
H +M++ S I D
Sbjct: 214 NAMMHSNQMLEKMSYIKD 231
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
K+ H Q+R L+ RE AR Q FPD ++F G D+ +QIGNAV P LA+ I ++
Sbjct: 270 KVFHYSQNRALSARELARIQSFPDDFIFYGNSIDIQQQIGNAVAPLLAEKIANQV 324
>gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT
12066]
gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT
12066]
Length = 541
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 212/557 (38%), Gaps = 98/557 (17%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P +DLF+G GGL G Q G + + E + + A+Y N + D C
Sbjct: 2 PYSVVDLFAGAGGLSLGFVQTGKYEMKVAFERDPNMQATYRLNHPNVELQGDVCGADYAD 61
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ K + +D+++ GPPCQGFS NR + S+ N LV ++
Sbjct: 62 IQKRYG-----------AIDVVIGGPPCQGFSNANRQKNHVISQ-NNMLVKQYIRAIKEL 109
Query: 237 QPKYIILENVTGL---VHF-----------------NKN---EILQCIFHCLLKMNYQVT 273
+PK ++ENV+ L VH NKN +L F +
Sbjct: 110 RPKAFVMENVSMLQSEVHRFYMEESDLDIVKKYQIPNKNTPLNLLNTEFMFDEALGIVKD 169
Query: 274 FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKT-SHAP 332
+D+LQ + R +I +K + L L I + N T S
Sbjct: 170 YDLLQQMLWPENHYRELNIIYKAKKN--ADKMKKSLEKHRQNLTKIAKTYIENNTDSFIA 227
Query: 333 YRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHI------------ 380
S A+ + S A+ + F P QRM+ I D HI
Sbjct: 228 QESRKAFQAVLNYFEGSVDADSFFFSIEPAIMIQRMLSKAKEIFDNHIHVDSYEITEKGL 287
Query: 381 --NLRELL-------------------QDHICKILSPLMEMRIRLIPSFPNADWRD---L 416
N+R D +C + + R R + N+D D L
Sbjct: 288 LVNIRSFAVFDYLECILTSSEYGYLIKSDILCAADFGVPQKRERFVVMGVNSDISDEVLL 347
Query: 417 PNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
P+ K+ G + ++ + + D S S K+ + P + RN+N
Sbjct: 348 PS--GKIKEGHYQTVRDAIFDLEDVVPIHDLASDKEGVSLKHKDQLSPLA---QQLRNSN 402
Query: 477 WQGVLGRLAWDESFDMTGQKNTII----PWSLVHTASRNNNWQGV-------LGRLAWDE 525
+L ++ D+ + + + + + + N + V RL +DE
Sbjct: 403 ---ILKNHIITKTTDVAMARFKALHQGENFHCLKDSLKTNTYTDVKRTQNTIYLRLNYDE 459
Query: 526 SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
T+V ++ +HP QDR +++RE AR Q FPDS+VF G Y+Q+GNAVP
Sbjct: 460 PSGTVVNV-----RKSMWIHPTQDRAISIREAARLQTFPDSFVFCGTKDKQYQQVGNAVP 514
Query: 586 PPLAKAIGYEIIKCIGN 602
P +AKAI ++ +GN
Sbjct: 515 PFMAKAIAEQLAAILGN 531
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 34/261 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LD+F+GCGG GL QAG + ++E++ A +Y N + +++ +D V + K
Sbjct: 5 ALDIFAGCGGFSSGLIQAG-HEVTSALEIDSWAAETYQFNHRNVNLLTEDITKVDSTYFK 63
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ K V+L+V GPPCQGFS ++ R+ K +N LV ++ +P+
Sbjct: 64 ---------VNFKDRVNLVVGGPPCQGFS-VSGPRQYGVYKKENALVAEYIRVIKAVEPE 113
Query: 240 YIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
Y ILENV G + + L + L ++ Y V DVLQ+ +YGV Q R+R+ ++ S
Sbjct: 114 YFILENVRGFTTATIEGRIKALNFLLAELREIGYHVYHDVLQAADYGVPQLRSRLFVVGS 173
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH-APYRSITVRDAISDLPRVS--QGA- 352
+ P FP H+ N T H PY SI +AI DLP ++ +G
Sbjct: 174 RHPIANP-FPNKTHSL-------------NGTQHLRPYLSIM--EAIGDLPIINACEGTD 217
Query: 353 NCYLFHNPPKTHFQRMMKDGS 373
N + P+ FQ+ M++GS
Sbjct: 218 NLVQYSLEPQNDFQQAMRNGS 238
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 16/82 (19%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP-LAKAIGYE- 595
N Q +HP +R LTVRE AR Q FPDSYVF+G AVP L + +G +
Sbjct: 301 NWQSSYIHPLLNRNLTVREAARIQTFPDSYVFKGK---------RAVPSASLLRKLGRDD 351
Query: 596 ---IIKC--IGNAVPPPLAKAI 612
+ +C +GNAVPP LAK I
Sbjct: 352 ENFLSQCHQVGNAVPPLLAKQI 373
>gi|393213319|gb|EJC98816.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 871
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 120/268 (44%), Gaps = 43/268 (16%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC------ 170
PL+ D F GCG G C AG K +VE S AA+ N + +++ + C
Sbjct: 386 PLRIFDPFGGCGAFAMGACDAGNMKFTHTVEKNTSAAATIRLNSPD-TIVYNQCANKMLE 444
Query: 171 ---------NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
N+ L LL G + PQ+ E+D IV+G PCQ S++NR + L
Sbjct: 445 YAVSRANGSNMTLNDLLTGEAL---PAPPQREEIDCIVSGFPCQPHSRMNRY--PRATDL 499
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVH--FNKNEILQ-------------CIFHCLL 266
N L T +S+ + PKY + ENV G + +I Q L
Sbjct: 500 VNELYLTTISWVEHLCPKYCLFENVPGFIQHRIGATQIDQHTIQGGIIQGGIKLTCRTLT 559
Query: 267 KMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF----SNQLFTINGN 322
+ YQV F LQ+ +YG Q R R + A++ G LP P H F S + NG+
Sbjct: 560 ALGYQVRFATLQAAHYGTPQRRKRFFLWAARTGLPLPDLPPRTHEFPATKSLAIRCSNGD 619
Query: 323 L---VANKTSHAPYRSITVRDAISDLPR 347
+ V+ +T AP +TV DAISDL R
Sbjct: 620 VAGSVSCETGTAPMPMVTVADAISDLKR 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG---GICDM 576
RL D+ F+TIVT P KQ K+L+P R++TVRE AR+QGFPD++ F+ I M
Sbjct: 770 RLEADKCFNTIVTNIGPTAKQSKVLNPWCKRLVTVRELARSQGFPDAFEFKALDLKIKTM 829
Query: 577 YKQIGNAVPPPLAKAIGYEI 596
++ IGNAVP PL+ A+G E+
Sbjct: 830 HEMIGNAVPWPLSVALGREL 849
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 18/233 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A+++ NF +V+ D + + ++
Sbjct: 12 AVDLFAGAGGMTLGFEQAGF-DVLAAVEIDPIHCATHEYNFPFWTVLCRDITKITGAEIR 70
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
S ++D++ GPPCQGFS + + R ++ + N LVF FL +PK
Sbjct: 71 NQ------SAIGDRDIDVVFGGPPCQGFSLIGK-RVVDDPR--NSLVFQFLRVVLELKPK 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV GL + +IL+ + YQV + VL + YGV Q+R R+ +L ++
Sbjct: 122 FFVMENVRGLAVGKQQKILETLIQEFQLQGYQVQKNYQVLNAACYGVPQARERLFLLGAR 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
++LP +PQP+ Q +N N K S+ P + TV DAI DLP V
Sbjct: 182 EDFELPKYPQPI----TQPVRLN-NFKYKKLSNLP-TAPTVWDAIGDLPEVEH 228
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
+HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA+ EII+ + NA
Sbjct: 332 IHPFTPRCITVREAARLHSYPDWFRFHATKWHGFRQVGNSVPPLLAKAVAAEIIRTL-NA 390
Query: 604 VP--PPLAKAIGYE 615
P P L + +G E
Sbjct: 391 SPFKPTLRQKLGDE 404
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 37/307 (12%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSV----ELERSEAASYDANFQECSVIQDDCN-LV 173
+C+DLF+G GGL G AG W + +++ A ++ NF E S + + L
Sbjct: 23 RCVDLFAGAGGLAVGFRSAG-----WGIVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLA 77
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
LL +G ++D +V GPPCQ FS N R + + L +L+
Sbjct: 78 ADELLADCGIERG-------DLDCLVGGPPCQSFSHNNHHRSAVDERAR--LFEHYLTLV 128
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
PK +++ENV G++ + ++ I L ++ + L + +G Q R RV I
Sbjct: 129 GALNPKTLVMENVPGILSIDGGRVVDEILASLKELGFDAVVGRLSAEEFGTPQLRRRVFI 188
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+AS+ G P P H +S L G + + A R +TV AI DLP + G
Sbjct: 189 VASRIGAASELLPNPTH-WSPALAKWGGP--KERPAGATKRPVTVWQAIGDLPEIENGGG 245
Query: 354 CYL---FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ + P T +QR M+ + L +H+C L+ + RI +P
Sbjct: 246 VQIAPWASSHPTTTYQREMRRAA----------PQLYNHVCHALASVNLDRIVHVPE--G 293
Query: 411 ADWRDLP 417
+WR++P
Sbjct: 294 GNWRNVP 300
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG-GICDMY 577
GRL+ TI+T +P G +HP QDR ++VRE AR QGFPDS+ F G + Y
Sbjct: 321 GRLSRGGFASTILTKCDP--HWGAYVHPTQDRTISVREAARLQGFPDSFRFAGDNLSKHY 378
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVP +A+AIG ++ +
Sbjct: 379 TQVGNAVPIQVAQAIGSAVLAHV 401
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 34/257 (13%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ G G K +SVE + A +Y NF +I D + + +K
Sbjct: 6 IDLFSGAGGMSLGFDLEGF-KNVFSVEYDLQTAQTYRYNFPNHVLINKDIQEISTNEIK- 63
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ + VD+I+ GPPCQGFS + +N L +L F + +PK
Sbjct: 64 -------KIINNNTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILKPKI 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I+ENV LV NK + ++ I + K+ Y+V +++LQ+ +Y + Q R RV I+ GY
Sbjct: 117 FIIENVARLVSHNKGKTIREIQESIEKLGYKVKYEILQTSDYNIPQKRQRVFIV----GY 172
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
K F P R +T+++AISDLP + G + ++
Sbjct: 173 KNIEFNYP---------------------EKLKRKVTIKEAISDLPPLKNGEKSKIPNHF 211
Query: 361 PKTHFQRMMKDGSRIHD 377
H Q M+ S I D
Sbjct: 212 AMNHSQEMLYKMSFISD 228
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
K+ H Q+R LT RE AR Q FPD ++F+G ++ +QIGNAVPP LAK I Y++
Sbjct: 267 KVFHYSQNRALTSRELARIQTFPDDFIFKGTSINVQQQIGNAVPPKLAKLIAYQV 321
>gi|359149333|ref|ZP_09182358.1| DNA-cytosine methyltransferase [Streptomyces sp. S4]
Length = 467
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 204/506 (40%), Gaps = 110/506 (21%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQ---------AGVA-KPCWSVELERSEAASYDANFQECS 164
D P + +DLF+GCGG +G + G A P VE++ + A +Y NF E +
Sbjct: 6 DQPYRIVDLFAGCGGFSQGFREYSESVRAREGGHAFVPVAGVEIDPAAALTYVTNFTEWA 65
Query: 165 VIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+ + L T V + D+I+ GPPCQGFS L + + +N
Sbjct: 66 HSTESADHRFH--LGDITDWVDVVRDSGLKADVILGGPPCQGFSGLGKE---DPEDPRNQ 120
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYG 283
L + +L QP+ I+ENV F +E + + ++ Y + ++L + +YG
Sbjct: 121 LWEEYFKVVELVQPRIFIIENVD---RFRSSEQITELTAAFAQIGYTLEEPEILNAADYG 177
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSIT--VRDA 341
AQ R R +++ + G + +P P H T +L ++ + +R++ +R
Sbjct: 178 AAQVRRRTIVIGVR-GDQHIGYPGPTHTGRR---TAGQHLPIDQAAPPAWRTLRECLRAG 233
Query: 342 ISDLPRVSQGANCYLFHNP--PKTHFQRMMKD-GSRIHDIHINLRELLQD-------HIC 391
+ +P ++G + ++ P R +++ G D LRE + H+
Sbjct: 234 HATIPNATRGTELPMVNDEGTPTVKISRKVRETGPLDKDFVARLRESIPGPFRGHDLHVG 293
Query: 392 KILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSS 451
+ + L R R I LP + +K++ +
Sbjct: 294 RTPTELSLARYRAI----------LPG--------------------QNRKALTEHDRVH 323
Query: 452 SCTSKGQKNTIIPWSLVHTASRNNNWQG-VLGRLAWDESFDMTGQKNTIIPWSLVHTASR 510
+ + Q+ + W R+ N G V+GRL WD+ P + T
Sbjct: 324 ADRAGFQRLSTDSW------DRHVNGSGDVMGRLEWDK------------PSVTIRT--- 362
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
E F ++G+ LHPE R L+ E AR QGFPD + +
Sbjct: 363 --------------EFFKP---------EKGRYLHPEAPRPLSHLEAARIQGFPDDFRWC 399
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEI 596
G + +QIGNAVP PLAKA+ +
Sbjct: 400 GSKTQIARQIGNAVPVPLAKALAAHV 425
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C ++ + + K + LP + V +I GPPCQG S NR R ++ + +N +
Sbjct: 882 NCQDAIREFVTSGFKSKILPLPGR--VGVICGGPPCQGISGYNRHRNVDSPLNDERNQQI 939
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F+ + +P Y+++ENV ++ +K + + L+ M YQ ++ +G YG++Q
Sbjct: 940 IVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQ 999
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQL-----FTINGNLVANKTSHAPYRSITVRDA 341
R+RV + + P LP FP P H + F N A +++ ++DA
Sbjct: 1000 FRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDA 1059
Query: 342 ISDLPRVSQGANCYL--FHNPPKTHFQRMMKD------GSRIHDIHINLRELLQDHICKI 393
ISDLP VS + + + PKT FQR ++ GS I + + LL DH
Sbjct: 1060 ISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTM-LLHDHRPFH 1118
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVK 422
++ R+ IP A++RDLP + V+
Sbjct: 1119 INEDDYARVCQIPKRKGANFRDLPGLIVR 1147
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T++T P ++ +LHPEQDRVLT+RE AR QGFPD + F G I + Y
Sbjct: 1185 FARLWWDETVPTVLTVPTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERY 1242
Query: 578 KQIGNAVPPPLAKAIGYEI 596
QIGNAV +++A+GY +
Sbjct: 1243 CQIGNAVAVSVSRALGYSL 1261
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 191 QKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLV 250
+K E+DL+ GPPCQGFS R + + N L FL F D F+PK +++ENV GLV
Sbjct: 4 KKGELDLVAGGPPCQGFSINAPKRSADDDR--NSLFLEFLRFVDEFEPKAVLIENVPGLV 61
Query: 251 HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLP--SFPQP 308
F LQ I L Y +L + ++GV Q+R R VI+ + P +FP+P
Sbjct: 62 SFEGGGTLQAILLALGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEP 121
Query: 309 LHAFSNQL-FTIN---GNLVANKTSHAPYRSITVRDAISDLPRVSQGA---NCYLFHNPP 361
+ ++ FT N N+VA T+ ++VRDAI DLP ++ G + + P
Sbjct: 122 VRNAPLRVNFTSNFEGKNIVALPTNLELPSFVSVRDAIDDLPALANGEIGKERKNYRSGP 181
Query: 362 KTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+ FQ M++GS + + +H L + R+ IP P +W D+P
Sbjct: 182 QNDFQVAMRNGS----------DGVLNHEAPRLGEINIKRMSFIP--PGGNWTDIPEDL- 228
Query: 422 KLPRG 426
LPRG
Sbjct: 229 -LPRG 232
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 489 SFDMTGQKNTIIPWSLVHTA---SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
SF G T IP L+ +R ++ GR+A D TI+T +P G H
Sbjct: 213 SFIPPGGNWTDIPEDLLPRGMRRARRSDHTKRYGRVAPDGLASTILTKCDP--HWGAYFH 270
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
EQDR TVRE AR Q FPDSY F G + Y+Q+GNAVP LA AIG I
Sbjct: 271 YEQDRCFTVREAARIQTFPDSYRFVGSRVEQYEQVGNAVPSLLAAAIGRSI 321
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK---NGL 225
+CN ++ + HK LP +VD++ GPPCQG S NR RE + ++ K N
Sbjct: 368 NCNEAIRDFVI--EGHKRKILPLPGDVDVVCGGPPCQGISGYNRNREFD-AQFKCEENKE 424
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
+ F+ +PKY+ +ENV ++ F + + L+ M YQ ++ +G YGV
Sbjct: 425 IIFFMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAKLGIMAAGCYGVP 484
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQ---LFTINGNLV--ANKTSHAPYRSITVRD 340
Q R RV +L P KLP FP P H + NLV ++ T+ + I + D
Sbjct: 485 QFRMRVFLLGCHPEEKLPPFPLPTHEAIRKNGCPLAFERNLVGWSDGTTVQLAKPIVLED 544
Query: 341 AISDLPRVS--QGANCYLFHNPPKTHFQRMMK------DGSRIHDIHINLREL---LQDH 389
+SDLP V + + + P+T FQR ++ G + R+ L DH
Sbjct: 545 ILSDLPEVGNEESRDEMPYVKDPQTEFQRYIRAFNSEVRGPKSRAAKSKSRKAKPKLYDH 604
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+L +R+ IP A++RDLP + V
Sbjct: 605 RPFVLDNDNYLRVLQIPKKKGANFRDLPGVVV 636
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WDE T+VT PN + +HP QDR+LT+RE AR QGFPDSY F G + + Y
Sbjct: 676 FGRLWWDEVVGTVVTCPNAHTQA--FIHPAQDRLLTIRESARLQGFPDSYRFHGEVKERY 733
Query: 578 KQIGNAVPPPLAKAIGYEI 596
QI NAV P+ +A+GY +
Sbjct: 734 CQIENAVAVPVGRALGYAL 752
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 4 HVQWLVRPNDTILGDKIQF-DNSTLFLTNACE--SIDLSVIKKTV-----CVDFVTNDSS 55
VQW R DT++ D+ Q D LF ++ + S+D V K T+ CVD +
Sbjct: 101 RVQWFFRAEDTVMEDQAQSNDPRRLFYSDLQDDYSLDCIVSKLTIVQVPPCVDKESKSIP 160
Query: 56 EEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPMPLD 115
+ + D + ++ + + +A +E+ K+ SK+ K P+P
Sbjct: 161 SSQYYYDMKYSLDYSTFSTLEMEDTNAILQSSHASSIEMK---KVDFSKK--QKSPVPNK 215
Query: 116 TPLKCLDLFSGCGGLMEGLC----QAGV-AKPCWSVELERSEAASYDANFQECSVIQDDC 170
L LDL+ GCGG+ GLC AGV W+V+ + SY N E V +
Sbjct: 216 KDLSLLDLYCGCGGMSTGLCLGAHGAGVNLVKKWAVDDDLVACESYRLNHPETRVRNETT 275
Query: 171 N---LVLKSLLK 179
N L+LK K
Sbjct: 276 NDFLLLLKEWQK 287
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 42/236 (17%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+D+FSG GGL G AG+ +++E++ + A +Y N +I+ D + V S
Sbjct: 11 IDIFSGAGGLSLGAEWAGIT-VRYAIEIDENSAKTYSKNHPNTQIIRQDISNVETSTFS- 68
Query: 181 HTQHKGVSLPQKHE-VDLIVAGPPCQGFSQLNR-ARELEKSKLKNGLVFTFLSFCDLFQP 238
HE + ++ GPPCQGFS NR R +E NGL FL F D P
Sbjct: 69 ------------HENIFILFGGPPCQGFSVSNRKTRTVENEN--NGLFKEFLRFVDDLNP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++ + ENV GLV+F+K + L+ I + K+ Y+ + +L + +YGV Q RNR I+ ++
Sbjct: 115 EWFLFENVEGLVNFDKGKTLRYILNQFKKIGYKTSEAILYASDYGVPQHRNRFFIVGNRN 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
FP P + ITV +AI+DLP + GA+C
Sbjct: 175 DIDF-DFPPPND-----------------------KIITVGEAINDLPIIENGAHC 206
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 494 GQKNTIIP-WSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVL 552
GQ IP + + + ++NN G+ RL D+ I ++ ++HP QDR L
Sbjct: 253 GQNWRSIPEFLMTNYKNKNNCHSGIYKRLEEDKPSVVISNY-----RKNMLIHPWQDRGL 307
Query: 553 TVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
+VRE AR Q FPD +VF G I + +QIGNAVPP LA+AI +I+
Sbjct: 308 SVREAARLQSFPDDFVFEGTIHYIQQQIGNAVPPLLAEAIFKKIL 352
>gi|374704182|ref|ZP_09711052.1| cytosine-specific methyltransferase [Pseudomonas sp. S9]
Length = 449
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 204/523 (39%), Gaps = 119/523 (22%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV----IQDDCNLVLKSL 177
+ FSGCGG G ++G + +++ +++ N + I D L+
Sbjct: 10 EFFSGCGGTSRGFTKSGRFNVVFGNDVKSEALRTFEFNHRLDDTPPLTINKDIRLLDIDD 69
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL-------------KNG 224
+ + +G++ E+D ++ GPPCQGFSQL R+ +L K K+ +N
Sbjct: 70 IHNSLKDRGIA---AGELDCMIGGPPCQGFSQLRRSEQLNKGKIVKFSGYSQLAHDPRND 126
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKN----EILQCIFHCLLK-MNYQVTFDVLQS 279
LV +L + +PK++++ENV +++ + ++ + + + L + + Y V +L
Sbjct: 127 LVLRYLEVAEALKPKFLVIENVPQMLNHGFDGRLGKLSETVINILERDLGYNVEVAILNC 186
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVR 339
+YGV Q R R V +AS G S P H I L P+ +TV
Sbjct: 187 ADYGVPQLRERAVFIASSIGPA--SLPTKTHTSPQNEILIAQGL-------KPW--VTVE 235
Query: 340 DAISDLPRVSQ------GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKI 393
AI+DLP S G + K + ++M+ S HI + + +
Sbjct: 236 QAIADLPPPSTNGIDSLGGKSINIYRGRKNDYTQLMRSQSTFPHNHIT-----RHYKQSV 290
Query: 394 LSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSC 453
L + EM+ P W + R Q Y E +K ++ S +
Sbjct: 291 LDTIKEMQ-------PGQTWD------AESERMQKKYQEIIKNHSL----------SLNI 327
Query: 454 TSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNN 513
TS+ +I +++ R W
Sbjct: 328 TSEEAMQQLIEMKIINPV--------FFKRYYWS-------------------------- 353
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
RLAW+ TI N L G+ HP + R +T+RE AR Q F D + F +
Sbjct: 354 ---AYSRLAWNAPALTITANANFLGS-GRFSHPSEQRGITMREAARLQSFDDDFRF---V 406
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAKAIGYEI 616
M + +P +G ++ IG AVPP L+KAI +
Sbjct: 407 TSM-----DEIPNGTRIGVGMDM---IGEAVPPLLSKAIALHL 441
>gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|354552802|ref|ZP_08972110.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|353556124|gb|EHC25512.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 427
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVEL+ + + NF + I C V +
Sbjct: 8 AVDLFAGVGGMTLGFEQAGF-DVLASVELDPIHCSIHRYNFPFWTTI---CASVTRITA- 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q + +S Q +D++ GPPCQGFS + + R LE + N LV FL QPK
Sbjct: 63 --NQIRELSSIQNQPIDVVFGGPPCQGFSLMGK-RCLEDDR--NSLVKHFLRLVVELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNY--QVTFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+ +L+ IF +K NY Q + L + NYGV Q R R+ +L +K
Sbjct: 118 YFVMENVRGMAIGKHQILLEEIFDEFVKNNYRVQTEYKFLNAANYGVPQLRERLFLLGAK 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G KLP++P + ++ Q NL T TV+DAI DLP V+
Sbjct: 178 QGLKLPNYPDFVTKYNQQ-----DNLSLPLTP-------TVKDAIQDLPEVNH 218
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 317 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 369
Query: 592 IGYEIIKCIGNAVPPPLAKAIGYEI 616
+ EIIK + N+ PL Y++
Sbjct: 370 VAQEIIKVLENS---PLKPTTKYKL 391
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 431
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A ++ NF CSV+ C V ++ K
Sbjct: 19 AVDLFAGAGGMTLGFEQAGF-DVLAAVEIDPIHCAVHEYNFPFCSVL---CKSVEETTGK 74
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + S ++D+I+ G PCQGFS + + R + + N LVF F QPK
Sbjct: 75 ---EIRDRSKINNQDIDVIICGSPCQGFSLMGK-RIFDDPR--NSLVFHFHRLVLELQPK 128
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ +ILQ + H YQV + VL + +YGV Q+R R+ ++ ++
Sbjct: 129 FFVMENVRGITLGEHKQILQALIHEFKSHGYQVEENYQVLNAAHYGVPQARERLFLIGAR 188
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
KLP +P+P+ + + N A S P TV +AI DLP V Q
Sbjct: 189 EDVKLPKYPKPITKPAK-----SNNSKAKNLSRLPL-CPTVWEAIGDLPEVEQ 235
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
L+ ++ R + Q + R A + G++ I + +H + N + A +
Sbjct: 279 LLSSSLRTKHSQTTIERFAAT----IPGEREPISRFHKLHPSGVCNTLR------AGTDK 328
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
+ T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP
Sbjct: 329 YKGSFTSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPP 381
Query: 587 PLAKAIGYEIIKCIG-NAVPPPLAKAIGYE 615
LAKA+ EII+ + + V P + +G E
Sbjct: 382 LLAKAVASEIIRRLNISPVKPSIHYPLGQE 411
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 36/232 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GGL GL QAG + W+ ++++ A+Y N + V D N+ + L
Sbjct: 1 MKIISLFSGAGGLDLGLIQAG-NEVIWANDIDKDAVATYRENIGDHIVCDDIKNINIYDL 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
E D++V G PCQGFS NR R LE + N L F S + Q
Sbjct: 60 ---------------PEADVVVGGFPCQGFSLANRKRTLEDER--NQLYKFFYSTIKIKQ 102
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ I ENV G++ K E+++ I + Y T +++ NYGV Q+R RV+I+ +
Sbjct: 103 PKFFIAENVRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMANYGVPQTRQRVLIIGQR 162
Query: 298 PGYK---LPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
Y L FPQP F+ +G + R I+++DAI P
Sbjct: 163 KDYGEEMLFQFPQP-------TFSKDGKDLP--------RWISIKDAIDHFP 199
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
TI+ N I H R L++RE A Q FP+ + F G + Y+QIGNAVP
Sbjct: 236 TILARGNGKGGVCAIPHYNGKRRLSIRESASVQTFPEKFHFIGSMNSCYRQIGNAVPVKF 295
Query: 589 AKAIGYEIIKCIGNAV 604
AK +G E+I+ N V
Sbjct: 296 AKLLGEELIRLEHNGV 311
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 38/235 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +D+FSG GGL G AG+ + C+ +E+ S A S+ N + V+Q D + S
Sbjct: 2 LYGIDIFSGAGGLSLGAEMAGI-QICYGIEINPSAAKSFTRNHKGAKVLQGDIKDIDPSK 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN-RARELEKSKLKNGLVFTFLSFCDLF 236
LK +G+ V +I+ GPPCQGFS N R R ++ N L F+ F
Sbjct: 61 LK-----EGID-----PVFIIMGGPPCQGFSLSNTRTRNMQNEN--NFLFLEFVRFVQEL 108
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P + +LENV GL + + + I C + Y+V VL + +YGV Q+RNR ++ +
Sbjct: 109 KPTWFVLENVWGLTNMEEGKTKNMIEDCFRALGYEVNSQVLWASDYGVPQNRNRFFMVGN 168
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ G + FP+P + ITV +AI DLP + G
Sbjct: 169 RHGIEF-EFPEPFE-----------------------KKITVEEAIGDLPDLDNG 199
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 439 KKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNT 498
+K K C +S ++++ P + SRNNN V+ R + GQ
Sbjct: 203 EKGKYKVPCSEASEYAQLMREHSHYPTQ--NFVSRNNNL--VIQRYTHIKQ----GQNWR 254
Query: 499 IIPWSLVHT-ASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREY 557
IP L+ A + G+ RL D+ I ++ ++HP QDR L+VRE
Sbjct: 255 AIPDELMQNYADKGRTHSGIYKRLIADQPSVVISNY-----RKSMLIHPYQDRGLSVREA 309
Query: 558 ARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
AR Q FPD + F G I + +QIGNAVPP LAKA+ +IIK
Sbjct: 310 ARLQSFPDDFYFEGPISHIQQQIGNAVPPLLAKAVFDQIIK 350
>gi|367031908|ref|XP_003665237.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
gi|347012508|gb|AEO59992.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
Length = 2146
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 106 FLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
F P P+P L+ +DLF G G GL + G + W+ ++ +Y AN E
Sbjct: 1528 FDPAQPVPRR--LRGMDLFCGSGNFGRGLEEGGAVEMLWANDIWDRAIHTYMANSPEPKS 1585
Query: 166 IQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
I+ V L + ++P+ EV+ I AG PC GFS L + L
Sbjct: 1586 IKPFLGSVDDLLRRALQGKYAENVPRPGEVEFISAGSPCPGFSLLTPDKTTLAQVKNQSL 1645
Query: 226 VFTFLSFCDLFQPKYIILENVTGLV---HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNY 282
V +F SF D ++PKY ILENV +V H ++L +F ++ M YQ + + ++
Sbjct: 1646 VASFASFVDFYRPKYGILENVVTIVQARHNRSQDVLSQLFCAIVGMGYQAQLVLGDAWSH 1705
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAF-----SNQLFTI-NGN-LVANKTSHAPYRS 335
G Q R+RV + + PG LP P H+ S L + NG V+ P++
Sbjct: 1706 GAPQGRSRVFLYFAAPGLHLPDAPLLSHSHYAGVNSRGLGEMCNGEPFVSRSFQPTPFKY 1765
Query: 336 ITVRDAISDLPRVSQG 351
++ + SDLP + G
Sbjct: 1766 VSAAEGTSDLPLIGDG 1781
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDR 550
MT + P + + W+ R+ + F T+ T P + + G LH +R
Sbjct: 1829 MTLADRALFPADGARVSPISQGWR----RVRPGDVFQTVTTRSQPTDARAGTGLHWIDNR 1884
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
LTV+E RAQGFPD V G + D +K +GN+V +A A+G
Sbjct: 1885 PLTVQEIRRAQGFPDQEVLLGTLADQWKLVGNSVARQMALALG 1927
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 43/303 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC---NLVL 174
L ++LF G GGL GL +AG + E+E AA++ N E ++ +D +
Sbjct: 5 LNAVELFCGAGGLSIGLSRAGF-HIALANEIEPDFAATFSLNHPETKMLNEDIHDIDFAR 63
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+SL G T +V L+ GPPCQGFS + ++ +N L + +L
Sbjct: 64 ESLKTGIT-----------DVTLVSGGPPCQGFSTVGSKNRRDE---RNSLFYEYLRAVA 109
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
P Y+I ENV+G E + L M Y + +L++ +YG+ Q R R +I+
Sbjct: 110 ELNPLYVIFENVSGFKKMYDGEAYLALTTELRSMGYDLASSILEASDYGLPQRRQRTIIV 169
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
K S P P H S LF + +TV DAISDLP + +
Sbjct: 170 GWKKHLPAVSLPSPTHFSSEDLF-------------GGAKKLTVMDAISDLPPLEANSTS 216
Query: 355 YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
+ + PK +Q+ M+ E L +H M+ + LIP D
Sbjct: 217 NEYASSPKNDYQQRMRGEV----------EELTEHNSSNYGTKMQEILSLIPEGGTVD-- 264
Query: 415 DLP 417
DLP
Sbjct: 265 DLP 267
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 37/59 (62%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ +HP Q+R L+ RE AR QGF DSYVF G QIGNAVPP + I EIIK I
Sbjct: 303 RCVHPFQNRALSTREGARLQGFHDSYVFTGSKTSKNLQIGNAVPPIFGEVIANEIIKSI 361
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 45/302 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF+GCGGL +G AG V+ +++ ++ N + D L
Sbjct: 1 MNAIDLFAGCGGLSKGFMDAGY-NIIVGVDNDQAALNTFAKNHNGAVALNAD-------L 52
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K T + + K ++D+I+AGPPCQGFS L R + + N L + +Q
Sbjct: 53 SKQETFDEIKRIAGKRKIDVIIAGPPCQGFS-LTGPRNFDDER--NKLYLAVIEMVKQYQ 109
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK I+ENV G+ K +I I KM Y + +L + +YGV Q R R++ + +
Sbjct: 110 PKAFIIENVPGMATLYKGQIKDEILRRFKKMGYNIECRILCAADYGVPQIRKRLIFMGIR 169
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCY 355
P FP+ P IT R A+SDLP + G
Sbjct: 170 KDIGAPKFPE--------------------VKLTPENYITCRAAVSDLPSLQNDLGMEEA 209
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ P+T +QR+M+ + L +H+ + +++ I L+P +++D
Sbjct: 210 EYIREPQTEYQRLMRGNCTV----------LHNHLGTNHTQMVKDTIALVPE--GGNYKD 257
Query: 416 LP 417
LP
Sbjct: 258 LP 259
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ H E +RV TVRE AR Q FPD +VF G +Q+GNAVPP L +A+G ++ I
Sbjct: 291 LFHYEYNRVPTVRESARMQSFPDDFVFLGTKTQQSRQVGNAVPPLLGQALGETLLTII 348
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 20/234 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF CS++ D + S ++
Sbjct: 11 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHEFNFPLCSILCKDVTQLTGSEIR 69
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
S + E+D++++G PCQGFS + + R+++ + N L+F F +PK
Sbjct: 70 KK------SAIGRREIDVVISGSPCQGFSMMGK-RDVDDPR--NSLIFHFQRLVLELKPK 120
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ E+L + ++ Y+V + VL + +YGV Q+R R+ ++ K
Sbjct: 121 FFVMENVPGIASGEHKELLNILISSFMEAGYKVEENYQVLNAVHYGVPQARKRLFLIGCK 180
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI-TVRDAISDLPRVSQ 350
Y+LP +PQ Q + V + ++ TV DAI DLP V +
Sbjct: 181 KDYELPKYPQ-------QTTILPRIKVPKRYKKVNLPAVPTVWDAIGDLPEVEK 227
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAK
Sbjct: 326 TSPRPI-------HPIAPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPRLAKV 378
Query: 592 IGYEIIKCIG-NAVPPPLAKAIG 613
+ +II +G A+ P L G
Sbjct: 379 VAAQIISALGVKAIKPSLKLTWG 401
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +D+FSG GGL G AG+ + + +E+ S A S+ N + V+Q D + S
Sbjct: 2 LYGIDIFSGAGGLSLGAEMAGI-QISYGIEINPSAAKSFTRNHKGAKVLQGDIKDIDPSK 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN-RARELEKSKLKNGLVFTFLSFCDLF 236
LK KG V +I+ GPPCQGFS N R R ++ K N L F+ F
Sbjct: 61 LK-----KG-----DEPVFIIMGGPPCQGFSLSNTRTRNMQNEK--NFLFLEFVRFVREL 108
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P + +LENV GL + + + I C + Y+V VL + +YGV Q+RNR ++ +
Sbjct: 109 KPTWFVLENVWGLTNIEEGKAKSMIEDCFRALGYEVNSQVLWASDYGVPQNRNRFFMVGN 168
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ G K FP+P + ITV +AI DLP + G
Sbjct: 169 RHGIKF-EFPEPFD-----------------------KKITVEEAIGDLPDLENG 199
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 472 SRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHT-ASRNNNWQGVLGRLAWDESFDTI 530
SRNN+ V+ R + + GQ IP L+ A + G+ RL D+ I
Sbjct: 234 SRNNDL--VIQRYKYIKQ----GQNWRAIPDELMQNYADKGRTHSGIYKRLIADQPSVVI 287
Query: 531 VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAK 590
++ ++HP QDR L+VRE AR Q FPD + F G I + +QIGNAVPP LAK
Sbjct: 288 SNY-----RKSMLIHPYQDRGLSVREAARLQSFPDDFYFEGPISHIQQQIGNAVPPLLAK 342
Query: 591 AIGYEIIKC 599
A+ EIIK
Sbjct: 343 AVFDEIIKM 351
>gi|367047877|ref|XP_003654318.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
gi|347001581|gb|AEO67982.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
Length = 2062
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ +DLF G G GL + G + W+ ++ + +Y AN S + +L
Sbjct: 1440 LRGMDLFCGSGNFGRGLEEGGAVEMRWANDIWDTAIHTYMANTPNPSSTHPFLGSVDDLL 1499
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL----KNGLVFTFL 230
+ L+G ++P+ EVD I AG PC GFS L +K+KL LV +F
Sbjct: 1500 RLALEGKYAD---NVPRPGEVDFISAGSPCPGFSLLT----PDKTKLVQIKNQSLVASFA 1552
Query: 231 SFCDLFQPKYIILENVTGLV---HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
SF D ++PKY ILENV +V H ++L +F ++ + YQ + + +YG Q
Sbjct: 1553 SFVDFYRPKYGILENVITIVQARHNRSEDVLSQLFCAIVGLGYQAQLILGDAWSYGAPQG 1612
Query: 288 RNRVVILASKPGYKLPSFPQPLHAF-----SNQLFTI-NGN-LVANKTSHAPYRSITVRD 340
R+RV + PG +LP P P H+ + L + NG V+ + P++ ++ +
Sbjct: 1613 RSRVFFYFAAPGLRLPESPTPSHSHFPGVKARGLGEMCNGEPFVSRSFAPTPFKYVSAAE 1672
Query: 341 AISDLPRVSQG 351
++DLP + G
Sbjct: 1673 GMADLPYIGDG 1683
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDR 550
MT + P + R++ W GR+ + T+ T P + + G LH +DR
Sbjct: 1729 MTPGDRALFPAGGFRVSQRSHGW----GRVKPSDVLSTVTTRSQPTDARAGTGLHWHEDR 1784
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
LTV+E RAQGFPD V G + D +K +GN+V +A A+G + + ++
Sbjct: 1785 PLTVQEVRRAQGFPDHEVLLGRVADQWKLVGNSVARQMALALGLKFREAWAGSL 1838
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 21/238 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
++LF+G GG+ G QAG +VE++ A+++ NF + C V++ +
Sbjct: 33 AVELFAGAGGMTLGFEQAGF-DVLAAVEIDPVHCATHEFNFPFWQIF---CKSVVE--IS 86
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G K +S + E+D++ GPPCQGFS + + R L+ + N LVF ++ QPK
Sbjct: 87 GEEIRK-LSKIKNQEIDVLFGGPPCQGFSLIGK-RLLDDPR--NSLVFHYIRLVLELQPK 142
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+++LENV G+ E + + +NY+V + VL + NYGV Q+R R+ +LA +
Sbjct: 143 FVVLENVKGMTVGKHREFILEVISAFAAINYKVYQDYQVLNAANYGVPQNRERLFLLACR 202
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
LP++PQP+ + + IN L+ + +V+ A+ DLP + Y
Sbjct: 203 QDLDLPNYPQPITTYIKKKKAINNQLLL---------TPSVKKALQDLPIIENYPELY 251
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 513 NWQGVLGRL-AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
+++G+ L A S T+P P+ HP R +TVRE AR +PD + F
Sbjct: 325 DYKGICNTLRAGTASNKGAFTSPRPI-------HPFIPRCITVREAARLHSYPDWFRFHV 377
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVP--PPLAKAIGYE 615
++QIGN+VPP LAKAI EIIK + N +P P K +G E
Sbjct: 378 TKWHGFRQIGNSVPPLLAKAIASEIIKAL-NVLPCRPRTIKNLGNE 422
>gi|358394495|gb|EHK43888.1| hypothetical protein TRIATDRAFT_36027 [Trichoderma atroviride IMI
206040]
Length = 1253
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQD 168
+P L+ +DLF G G GL G + W+ + + +Y AN Q+
Sbjct: 728 LPATEKLRGIDLFCGGGNFGRGLEDGGAIQMKWANDYDSKAIHTYMANVKNPQDLDPFLG 787
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
+ + + ++G ++PQ +VD I G PC GFS L + + LV
Sbjct: 788 SIDDLQRLSMQGDFAK---NVPQIGDVDFISGGSPCPGFSALTNDKTTAAQRKNQSLVAA 844
Query: 229 FLSFCDLFQPKYIILENVTGLVH---FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
F SF DL++PKY +LENV G+V+ ++ + L+ + YQ F L + + G
Sbjct: 845 FASFVDLYRPKYGVLENVPGIVNKKTARDQDVFSQLICALVGLGYQTHFFFLDASSCGSP 904
Query: 286 QSRNRVVILASKPGYKLPSFPQPLH---AFSNQL---FTINGNLVANKT--SHAPYRSIT 337
Q R R+ ++ + PG +LP P H A + +L + NG +A + + P++ +T
Sbjct: 905 QRRPRIFVVFAAPGLELPKKPPHTHSHPANTRELGIGYLPNGQSMAAREMPTATPFKYVT 964
Query: 338 VRDAISDLPRV--SQGANC--YLFHNPPKTH 364
+A+SDLP + +Q C Y H P + H
Sbjct: 965 AEEAVSDLPAIHDAQPDICVPYPDHRPTRGH 995
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ ++ F+TIVT P + K G++LH ++R++TV E RAQGF D V G Y
Sbjct: 1064 GRMFPNKLFETIVTATTPTDAKNGRVLHWRENRLITVMEARRAQGFRDEEVLLGDPGTQY 1123
Query: 578 KQIGNAVPPPLAKAIG 593
K +GN+V +A A+G
Sbjct: 1124 KIVGNSVARQVAVALG 1139
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 12/245 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ L+LFSG G GL + G + W+VE E + +Y AN + ++ N L
Sbjct: 735 LRALNLFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 794
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+G ++ + + + +V+ I AG PCQG+S +N +E E S + ++ + S+ D
Sbjct: 795 LRAFQGKSEDNNL-VAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASYVD 853
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
F+PKY ILENV + + + + C C + M YQ+ L + ++G QSR+R+ I
Sbjct: 854 FFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFI 913
Query: 294 LASKPGYKLPSFPQPLHAFSNQLF------TINGNLVANKTSHAP-YRSITVRDAISDLP 346
+ PG +LP+ P H+ ++ NG + P + ++V ++ DLP
Sbjct: 914 FIAVPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWDIPVFDFLSVSKSLMDLP 973
Query: 347 RVSQG 351
R+ +G
Sbjct: 974 RIGRG 978
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T+ T P+P K G+ LH E+DRV+TV E RAQGFPD V G +K +GN+V
Sbjct: 1051 TVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQWKIVGNSVARQ 1110
Query: 588 LAKAIGYEIIK-CIGN 602
+A A+G + + C+ N
Sbjct: 1111 VALALGLVMREACVKN 1126
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 19/269 (7%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L ++ ++ H+ LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 491 DCPLKIREFVQ--EGHRRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 548
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 549 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 608
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 609 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCIVAYDETEKPSLKKALLLGDA 668
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSRI-------HDIHINLRELLQDHICK 392
ISDLP+V Q + + PKT FQR ++ G + + + +LL +
Sbjct: 669 ISDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLR 728
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+ + E R++ IP A++RDL + V
Sbjct: 729 LNNDDYE-RVQQIPVKKGANFRDLKGVKV 756
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 42/326 (12%)
Query: 104 KEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQEC 163
K F P P L C+D+FSG GGL EG QAG + S +++ + ++ NF E
Sbjct: 2 KSFEPTAEQPA-AGLTCVDIFSGAGGLAEGFRQAGFSIVSGS-DIDSFASETFRFNFPES 59
Query: 164 SVIQDD-CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLK 222
S + D L + +L+ G E+D ++ GPPCQ FS + R E
Sbjct: 60 SFFEGDIAELSGQEILQSTDIADG-------EIDCLIGGPPCQAFSYNSHLRTHEGQVA- 111
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNY 282
GL +L P+Y+++ENV G++ ++ I L ++ Y+ ++ + +Y
Sbjct: 112 -GLFREYLRLVGELNPRYLVMENVPGILSVGDGGVVGEIASRLGELGYETDGRIVYAEDY 170
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH--------APYR 334
GV Q R R++ +AS+ G FP H S + V+N+ H P R
Sbjct: 171 GVPQQRRRMIFVASRIGLPANIFPVGTHGPSPK-------PVSNEHVHRWDPNPCDPPSR 223
Query: 335 SITVRDAISDLP---RVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHIC 391
+ V AI DLP + + + FQR ++GS + +H C
Sbjct: 224 LVRVWSAIGDLPVTVSTTDESKALGYRTGAWCDFQRYAREGSL----------GVLNHHC 273
Query: 392 KILSPLMEMRIRLIPSFPNADWRDLP 417
L P RI +P WRD+P
Sbjct: 274 AGLGPNSLARISHVPQ--GGSWRDIP 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+R ++ GRLA + T++T +P G +HP +DRVLTVRE AR Q FPD +
Sbjct: 308 ARTSDHTKRYGRLAPKDLACTVLTKCDP--HWGCYIHPNEDRVLTVREAARLQSFPDRFN 365
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV--PPPLAKA 611
F G Y+ +GN+VPP LA++I I+ NAV PP+ +A
Sbjct: 366 FIGPQLAQYRLVGNSVPPLLARSIAQSIV-AFNNAVVAEPPIQEA 409
>gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1371
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 12/245 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ L++FSG G GL + G + W+VE E + +Y AN + ++ N L
Sbjct: 795 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 854
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+G+T+ + + + +V+ I AG PCQG+S +N +E E S + ++ + S+ D
Sbjct: 855 LRAFQGNTEANDL-VAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASYVD 913
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
F+PKY ILENV + + + + C C + M YQ+ L + ++G QSR+R+ I
Sbjct: 914 FFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFI 973
Query: 294 LASKPGYKLPSFPQPLHAFSNQLF------TINGNLVANKTSHAP-YRSITVRDAISDLP 346
+ PG +LP+ P H+ ++ NG + P + + V ++ DLP
Sbjct: 974 FIAAPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWDIPVFDFLCVSKSLMDLP 1033
Query: 347 RVSQG 351
R+ +G
Sbjct: 1034 RIGRG 1038
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T+ T P+P K G+ LH E+DRV+TV E RAQGFPD V G +K +GN+V
Sbjct: 1111 TVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQWKVVGNSVARQ 1170
Query: 588 LAKAIGYEIIK-CIGN 602
+A A+G + + C+ N
Sbjct: 1171 VALALGLVMREACVKN 1186
>gi|365128270|ref|ZP_09340555.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623307|gb|EHL74431.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 359
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 185/493 (37%), Gaps = 165/493 (33%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI----QDDCNLV 173
+K +DLF G GGL GL +AG+ ++++ S +Y N C+ I +D
Sbjct: 3 IKAVDLFCGVGGLTYGLQKAGIPV-VAGIDIDDSCEYAYTHN-NNCTFIHKSVEDVTGKE 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLVFTFLSF 232
+++LL+G +V ++V PCQ FS + ++ +SK K+ L++ F
Sbjct: 61 IRALLRGA------------DVKILVGCAPCQPFSSHQKDKQ-NRSKHKDWKLLYQFGRL 107
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+ +P + +ENV L K ++ + L +NY V + V+ NYGV Q R R++
Sbjct: 108 VEETRPHIVSMENVPEL---EKEKVFKDFVSTLEGLNYIVNYQVVNVANYGVPQRRKRLI 164
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+LAS+ ++ I+ A H +TVRDAI LPR+S G
Sbjct: 165 LLASR---------------RKEIKLID----ATHQKH-----LTVRDAIGSLPRISAGE 200
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ R+ HI LSP+ RI+ S P
Sbjct: 201 ----------------ANENDRL-------------HISPALSPINLERIQ--HSVPGGT 229
Query: 413 WRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTAS 472
WRD P E+L N KK+
Sbjct: 230 WRDWP--------------ERLVLNCHKKEG----------------------------- 246
Query: 473 RNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVT 532
+ V GR+ WD+ +T
Sbjct: 247 -GKTYASVYGRMKWDD--------------------------------------LSPTIT 267
Query: 533 TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG-----ICDMYKQIGNAVPPP 587
T G+ HPEQDR +T+RE A Q FP Y F I + + IGNAVPP
Sbjct: 268 TQFIGYGTGRFGHPEQDRAITLREGAILQSFPPDYQFSPSNVEVPIRKIARHIGNAVPPR 327
Query: 588 LAKAIGYEIIKCI 600
L + IG II+ +
Sbjct: 328 LGEVIGESIIRSL 340
>gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ + + NF + I + S ++
Sbjct: 8 AVDLFAGVGGMTLGFEQAGFDV-LASVEIDPIHCSIHRYNFPFWTTICASVTSIKASEIR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+S + +D++ GPPCQGFS + + R LE + N LV F+ QP
Sbjct: 67 E------LSTIKNKPIDVVFGGPPCQGFSLMGK-RSLEDDR--NTLVKHFIRLVLELQPN 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+V + L+ IF + NYQV + +L S NYGV Q R R+ +L SK
Sbjct: 118 YFVIENVPGMVIGKQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSK 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G LP++P +F IN S+ P + TV++AI DLP V+Q
Sbjct: 178 KGLNLPNYP----SFITDYTHIND-------SNLP-STPTVKEAIQDLPEVNQ 218
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 317 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 369
Query: 592 IGYEIIKCI 600
+ EI+K I
Sbjct: 370 VAQEILKVI 378
>gi|416403376|ref|ZP_11687522.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
gi|357261713|gb|EHJ10948.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
Length = 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ + + NF + I + S ++
Sbjct: 8 AVDLFAGVGGMTLGFEQAGFDV-LASVEIDPIHCSIHRYNFPFWTTICASVTSIKASEIR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+S + +D++ GPPCQGFS + + R LE + N LV F+ QP
Sbjct: 67 E------LSTIKNKPIDVVFGGPPCQGFSLMGK-RSLEDDR--NTLVKHFIRLVLELQPN 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+V + L+ IF + NYQV + +L S NYGV Q R R+ +L SK
Sbjct: 118 YFVIENVPGMVIGKQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSK 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G LP++P +F IN S+ P + TV++AI DLP V+Q
Sbjct: 178 KGLNLPNYP----SFITDYTHIND-------SNLP-STPTVKEAIQDLPEVNQ 218
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 317 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 369
Query: 592 IGYEIIKCI 600
+ EI+K I
Sbjct: 370 VAQEILKVI 378
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 12/245 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ L++FSG G GL + G + W+VE E + +Y AN + ++ N L
Sbjct: 760 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 819
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+G ++ + + + +V+ I AG PCQG+S +N +E E S + ++ + S+ D
Sbjct: 820 LRAFQGKSEDNNL-VAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASYVD 878
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
F+PKY ILENV + + + + C C + M YQ+ L + ++G QSR+R+ I
Sbjct: 879 FFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFI 938
Query: 294 LASKPGYKLPSFPQPLHAFSNQLF------TINGNLVANKTSHAP-YRSITVRDAISDLP 346
+ PG +LP+ P H+ ++ NG + P + ++V ++ DLP
Sbjct: 939 FIAVPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWDIPVFDFLSVSKSLMDLP 998
Query: 347 RVSQG 351
R+ +G
Sbjct: 999 RIGRG 1003
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
T+ T P+P K G+ LH E+DRV+TV E RAQGFPD V G +K +GN+V
Sbjct: 1076 TVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQWKIVGNSVARQ 1135
Query: 588 LAKAIGYEIIK-CIGN 602
+A A+G + + C+ N
Sbjct: 1136 VALALGLVMREACVKN 1151
>gi|427722864|ref|YP_007070141.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427354584|gb|AFY37307.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 424
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE++ A ++ NF D + + K+ +
Sbjct: 10 VVDLFAGCGGMSLGLEAAGFDIAA-AVEIDPVHALVHEFNFPYGKTFCRDVSTIHKNDIF 68
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+G PQK E+D++V GPPCQGFS + + R L + N L+F ++ D QPK
Sbjct: 69 EAIAAQGY--PQK-EIDVMVGGPPCQGFSMMGK-RNLNDPR--NRLIFEYVRLLDELQPK 122
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYGVAQSRNRVVILASKP 298
Y + ENV G+ + LQ + L + YQV V+ S +YG Q+RNR+++L +
Sbjct: 123 YFVFENVQGMASGKHRDFLQRLLSKLAAVGYQVLEPRVINSADYGAPQNRNRLILLGYRQ 182
Query: 299 GYKLPSFPQPLHA 311
K +P+P H
Sbjct: 183 NVKPLEYPEPTHG 195
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H Q R +++RE AR FPD + + +++IGNAV P LAKA
Sbjct: 311 TAPRPI-------HYSQPRCISIREAARLHTFPDWFQLHRKVWHGFREIGNAVVPLLAKA 363
Query: 592 IGYEIIKCI 600
IG +I +
Sbjct: 364 IGDRLISAL 372
>gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
Length = 433
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ + + NF + I C V K
Sbjct: 8 AVDLFAGVGGMTLGFEQAGF-DVLASVEIDPIHCSIHHYNFPFWTTI---CTSVTKITA- 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q + +S + +D++ GPPCQGFS + + R LE + N LV F+ QPK
Sbjct: 63 --NQIRELSKIKNKPIDVVFGGPPCQGFSLMGK-RSLEDGR--NSLVKHFIRLVIELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDV--LQSGNYGVAQSRNRVVILASK 297
Y I+ENV G+ L+ IF+ K NYQV D L + NYGV Q R R+ +L +K
Sbjct: 118 YFIIENVPGMTIGKHKIFLEEIFNEFAKNNYQVKTDYQNLNAANYGVPQLRERLFLLGAK 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G LP++P + ++ Q NL T + V+DAI DLP V+
Sbjct: 178 QGLILPNYPNFVTQYNQQ-----DNLFLPTTPN-------VKDAIQDLPEVNH 218
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 317 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 369
Query: 592 IGYEIIKCIGNAVPPPLAK 610
I E+IK + + P+ K
Sbjct: 370 IAQEVIKVLEISPIKPMTK 388
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
TQH GV +VD+IV GPPCQGFS + R + +NGL F+ + ++P +
Sbjct: 14 TQHTGV---YPDDVDVIVGGPPCQGFSSIRPDRGDDVEDERNGLYSDFIEYVSHYEPDFF 70
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
I+ENV GL + + I + Y + +L N+G+ Q R R++++ +
Sbjct: 71 IMENVVGLATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAADEQD 130
Query: 302 LPSFPQPLHAFSN---------QLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ FP+P H + ++ T L + + A + T+ DAI DLP++ G
Sbjct: 131 I-EFPEPTHQANGRTIGYRDKTKVITTQPTLSNFRDAEALPEARTIMDAIGDLPKLEAGE 189
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIH 379
+ PP+ +Q ++ GS +H
Sbjct: 190 EAIEYTEPPQNRYQAALRQGSERLTLH 216
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
K +HP QDR LT RE AR Q FPD++ F G D+ +QIGNAVPP L + + ++
Sbjct: 287 KCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQIGNAVPPLLGRVLAEHVV 342
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 53/306 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLL 178
+DLF G GGL GL AG + ++ + +++A I +L ++ LL
Sbjct: 5 AIDLFCGAGGLSAGLEMAGFTVLAGN-DIFDAAGKTFEATHPRAKFIPGPIEDLTIEHLL 63
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ V+ + E+ ++ GPPCQ +S N R + + L +L D +P
Sbjct: 64 E-------VTGLKPGELTVLAGGPPCQAYSVYNHQRGMHDERAT--LFKEYLRIVDGLRP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++I++ENVTG+ E + I L + Y+V VL++ YGV Q R RVV + ++
Sbjct: 115 EWIVMENVTGIYSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRV 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRS---ITVRDAISDLPRVSQGA--- 352
G + S P+P +H P RS +T++DAI DLP + G
Sbjct: 175 GVPI-SHPEP--------------------THGPGRSMPFVTIKDAIGDLPALENGEAKP 213
Query: 353 -NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA 411
YL P T +QR M+ + + + +H L + R+ IP P
Sbjct: 214 DAAYLDGKP--TSYQRQMRGNATV----------ITNHAAPRLGQVNMDRLPHIP--PGG 259
Query: 412 DWRDLP 417
WRD+P
Sbjct: 260 SWRDIP 265
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GR+ WD T++T + G +HPEQDR ++VRE AR Q FPD + F G D Y
Sbjct: 286 GRMTWDGLSCTVLTKCD--IHWGAYIHPEQDRAISVREAARLQAFPDWFEFHGSRTDQYV 343
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPP L KAIG ++ I
Sbjct: 344 QVGNAVPPVLGKAIGDHLMGLI 365
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC 170
P + + L+ LDLF G G GL + G + W+ + +Y AN +++
Sbjct: 470 PAVVISELRGLDLFCGGGNFGRGLEEGGAVRMSWANDCNARAIHTYMANCSHPNLLSPYL 529
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
+ + + + S+P VD I G PC GFS L + ++ + LV F
Sbjct: 530 GSIDDFQKEAFSGNFSKSVPTIGSVDFISGGSPCPGFSLLTNDKTTDEQRKNQSLVAAFA 589
Query: 231 SFCDLFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
S DL++P Y +LENV G+V N ++L ++ + YQ L + +YG AQ
Sbjct: 590 SCVDLYRPMYGLLENVPGIVQSKANRDQDVLSQFICAIVGIGYQAQVFCLDASSYGSAQR 649
Query: 288 RNRVVILASKPGYKLPSFPQPLHA------FSNQLFTINGNLVANKT--SHAPYRSITVR 339
R+RV I + P YKLP PQ H+ +++ + G+ +A + P+ T R
Sbjct: 650 RSRVFISFAAPNYKLPGKPQQTHSHPPATRYTSFVKLPTGDALAERDFLRATPFSYSTAR 709
Query: 340 DAISDLPRVSQG 351
S LP++ G
Sbjct: 710 QVTSGLPKIYSG 721
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL ++ I+T P + K G+ LH +++R L+V E RAQGFPD V G + Y
Sbjct: 794 GRLYPNQLMGAIITKQTPGDRKHGRQLHWDENRGLSVMEARRAQGFPDDEVILGTPAEQY 853
Query: 578 KQIGNAVPPPLAKAIGYEI 596
K +GN+V +A A+G I
Sbjct: 854 KIVGNSVAREVALALGLSI 872
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF GCGGL G Q G K ++ +++ ++ N ++ I D + +
Sbjct: 4 VVDLFCGCGGLSYGFEQEGF-KTVLGIDHDKAALKTFKLNHKDAKTILGDIREISNQQIL 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ G S +D+++ GPPCQG S L+ R+LE + N L +F+ L PK
Sbjct: 63 --DKLNGCS------IDVVIGGPPCQGLS-LSGPRKLEDPR--NQLYLSFIRIVSLLNPK 111
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
Y+++ENV G++ K +I I L + Y V F VL++ YGV Q R RV + +K
Sbjct: 112 YVLIENVPGIISLFKGKIKDEIIKSLETLGYTVNFQVLKASEYGVPQHRRRVFFIGTKAM 171
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCYLF 357
K FP P H L + I+ DA+ DLP + G +
Sbjct: 172 EKF-DFPLPTHKEQEDLIF--------------KKMISTYDALHDLPVLENELGETIQEY 216
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P + +Q +M R + H+ +HI S ++ I+L+P P +++ LP
Sbjct: 217 ALPIQNAYQELM----RFNSSHV------LNHIAANHSEKVKETIKLVP--PGKNYKALP 264
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
H +RV TVRE AR Q FPD + F G + ++Q+GNAVPP LA+A+ +I++
Sbjct: 297 FHYYANRVPTVRECARLQSFPDRFEFIGNKTEQFRQVGNAVPPILAQALAKKILE 351
>gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
Length = 498
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 207/535 (38%), Gaps = 133/535 (24%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF--------QECSVIQDDC 170
+ LDLF+GCGGL G G + +VEL+ A S+ NF Q +
Sbjct: 19 RVLDLFAGCGGLSLGFHSKGF-EIAGAVELDPHAARSHGMNFHPGLETHAQPVDITSVGP 77
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLK 222
+ K L G T H +D+I+ GPPCQ F+++ R + E + +
Sbjct: 78 EELAKKLSLGDTDHA---------IDIIIGGPPCQAFARVGRPKLREVDEHPEAFRHDPR 128
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNY 282
L +L + + F+P +++ENV ++ I + I L Y + +L + Y
Sbjct: 129 ARLYQEYLHYVEAFKPVAVLMENVPDALNHGGQNIAEEICEVLETKGYVAGYTLLNAAYY 188
Query: 283 GVAQSRNRVVILASKPGYKLP-SFPQPLH------AFSNQL-----FTINGNLVANKTSH 330
GV Q R R+ +LA + FP+P H + F GNL+ +
Sbjct: 189 GVPQMRERMFLLAYRREITDSIVFPKPTHWVQLPPGYEGSRAVALKFLKRGNLIKGAFDY 248
Query: 331 -APYR-------SITVRDAISDLP-----------RVSQGANCYLFHNPPK-------TH 364
AP ++T A+ DLP R+++GA F P +
Sbjct: 249 IAPPEATAELIPAVTAFQALGDLPAIFARKELAEGRLTRGAR--RFDQPVPYGQAIQLSD 306
Query: 365 FQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS--FPNADWRDLPNICVK 422
+ R+M+ S L DH+ + L + RL P +P A
Sbjct: 307 YARLMRSWS-----GFEAGNALSDHVIRYLPRDYPLFARLKPGDQYPQA----------- 350
Query: 423 LPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLG 482
+ + + E L+ AK+ ++ + S + K +I+P N W
Sbjct: 351 FKQAKVMFQEALEVRAKQGNTIVE----DSAEYEALKKSIVP--PYDPGKFPNKW----- 399
Query: 483 RLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDE-SFDTIVTTPNPLNKQG 541
R W ++ T + H LG+ ++ +D
Sbjct: 400 RKMWQDAPART---------LMAH-----------LGKDSYSHIHYDH------------ 427
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+Q R ++VRE AR Q FPD + F G + ++QIGNAVPP +AKA+ +I
Sbjct: 428 -----DQARTISVREAARLQSFPDGFKFSGTMNPAFRQIGNAVPPLMAKALATQI 477
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 122/266 (45%), Gaps = 39/266 (14%)
Query: 88 NARPLELAY-ILKII--HSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCW 144
NA P+ LA IL+ I H+K P+ + L +FSG GGL G QA + W
Sbjct: 118 NAVPVPLATAILQTILQHAKAHHPEKSL-----FSALSIFSGAGGLNLGAQQAKLPNAKW 172
Query: 145 ----SVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVA 200
S++++R S + +F +VI C ++ TQ K + +DL
Sbjct: 173 QTIASIDIDRDACTSLEHHFANKNVI---CQNIIDI-----TQPKSL---MSQPLDLSYG 221
Query: 201 GPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQC 260
GPPCQ FSQ + + L S + L++ F+ F P Y +LENV GL N ++L
Sbjct: 222 GPPCQSFSQAGKQKGL--SDPRGNLIYEFIRFLSDLNPNYFLLENVKGLQGINNGQLLHL 279
Query: 261 IFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN 320
I + K+ Y VTF V+ + +YG Q R R++IL K + P P HA L
Sbjct: 280 IIDDIRKLGYNVTFGVVNAADYGTPQLRKRIIILGCKQDLGFVNLPLPTHATEANLLL-- 337
Query: 321 GNLVANKTSHAPYRSITVRDAISDLP 346
PY+ TV A+ +LP
Sbjct: 338 ----------QPYK--TVGQALQNLP 351
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
K +HP ++R +T RE AR QGFPD++ F G + + +QIGNAVP PLA AI I++
Sbjct: 78 KFVHPFENRFITTREAARLQGFPDNFEFIGSLTSIQRQIGNAVPVPLATAILQTILQ 134
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 19/269 (7%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L ++ ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 488 DCPLKIREFVQEGRKRKILPLP--GDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 545
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + CL+ M YQ ++ +G YG+ Q
Sbjct: 546 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQ 605
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LVANKTSHAPY--RSITVRDA 341
R RV + + LP +P P + + N +VA + P +++ + DA
Sbjct: 606 FRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQRPSLKKALLLGDA 665
Query: 342 ISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICK 392
SDLP+V Q + + PKT FQR ++ D S + + +LL +
Sbjct: 666 FSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLR 725
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+ + E R++ IP A++RDL + V
Sbjct: 726 LNNDDYE-RVKQIPVKKGANFRDLKGVKV 753
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WD++ T+VT P N+ ILHP Q RVLT+RE AR QGFPD Y G I + Y
Sbjct: 793 FGRLWWDQTVPTVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKY 850
Query: 578 KQIGNAVPPPLAKAIGYEIIKCIGNA 603
Q+GNAV P+A+A+GY C+G A
Sbjct: 851 IQVGNAVAVPVARALGY----CLGQA 872
>gi|347836057|emb|CCD50629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1459
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 15/256 (5%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L LDLF G G GL ++GV W+V+L + +Y AN ++ + N +L
Sbjct: 701 LNGLDLFCGGGNFGRGLEESGVLHNKWAVDLFSAALQTYAANLKNPEKTDLYFGSVNDLL 760
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
G+ Q + LP +VD+I+AG PCQGFS++N + ++S L+ + ++ D
Sbjct: 761 SEAFVGNPQSLKIPLPG--DVDVIMAGSPCQGFSRMNSNKGNDQSLRNQSLIASVAAYID 818
Query: 235 LFQPKYIILENVTGLVH--FNKNE-ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV + ++E +L + ++ + YQV +L S ++G +QSR+R+
Sbjct: 819 FYRPKYGLLENVLNMAQKGLRRDEDVLSQLICTIVGLGYQVQLFLLDSWSFGSSQSRSRI 878
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHA-------PYRSITVRDAISD 344
+ + PG P+ H+ + +AN S P+ T +++D
Sbjct: 879 FVSFAAPGCVPLEHPELSHSHPPHVGERGLGKLANGQSFGSRVHCPTPFHYRTAEQSVAD 938
Query: 345 LPRVSQGANCYLFHNP 360
LP + GA + P
Sbjct: 939 LPYIGDGATGHCTKYP 954
>gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 500
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 212/537 (39%), Gaps = 97/537 (18%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
++ LDLFSGCGGL G G + +VE + A S+ NF S + + + +
Sbjct: 20 VRVLDLFSGCGGLSLGFHAVGC-EIVAAVEHDPDAAKSHGLNFHAGSPVHMEPRDISSTP 78
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLKNGLVFTF 229
T+ G+ D+++ GPPCQ F+++ R++ E + + L +
Sbjct: 79 PANLTKALGLGH-HSLAFDVVIGGPPCQAFARVGRSKLREVADHPEAFRHDPRARLYIEY 137
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
L + + P +++ENV +++ + I + I L Y+ + +L + YGV Q R
Sbjct: 138 LDYVEECAPLAVLMENVPDVLNHGGHNIAEEISEVLESRGYRCGYTLLNAARYGVPQMRE 197
Query: 290 RVVILA-SKPGYKLPSFPQPLH-----------------AFSNQLFTINGNLVANKTSHA 331
R+ ++A K + FP+P H S LF+ +G+ V +
Sbjct: 198 RMFLIAYRKELQQTVEFPKPTHWVDLPAGYEGSRAVALKLLSRDLFSESGHYVPAPDAGR 257
Query: 332 PYR-SITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI 390
+ ++T + AI DL P + ++++ DG LL
Sbjct: 258 NLKPAVTAKQAIGDL---------------PTIYARKLLADG------------LLTRGA 290
Query: 391 CKILSPLMEMRIRLIPSFPNA--DWRDLP-------NICVKLPRGQHSYTEKLKYNAKKK 441
+ P+ R R I + W P ++ LPR ++ + +
Sbjct: 291 RRFNVPIAFNRPRSISRYAEEMRSWPGFPAKAALYDHVIRYLPRDYELFSRLRPGDQYPQ 350
Query: 442 KSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIP 501
C K ++ +K P S G AW+ +++I+P
Sbjct: 351 AYQCALKMFEEKLAQLRKKKAAPES---------------GTAAWNR------LRDSIVP 389
Query: 502 WSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQ 561
N W+ ++ D T++ + +Q R ++VRE AR Q
Sbjct: 390 --PYDPDKFPNKWR----KMEEDWPARTLMAHLGKDSYSHIHYDSDQARTISVREAARLQ 443
Query: 562 GFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP-----PLAKAIG 613
FPD +VF G + ++QIGNAVPP LAK + ++ + V LA+A+G
Sbjct: 444 SFPDGFVFSGTMNPAFRQIGNAVPPLLAKRLAEMLVSRMRAGVAAKEATNELAEAVG 500
>gi|422822980|ref|ZP_16871168.1| modification methylase HgiDII [Streptococcus sanguinis SK405]
gi|422826940|ref|ZP_16875119.1| modification methylase HgiDII [Streptococcus sanguinis SK678]
gi|422854922|ref|ZP_16901580.1| modification methylase HgiDII [Streptococcus sanguinis SK1]
gi|324993630|gb|EGC25549.1| modification methylase HgiDII [Streptococcus sanguinis SK405]
gi|324995058|gb|EGC26971.1| modification methylase HgiDII [Streptococcus sanguinis SK678]
gi|327462899|gb|EGF09220.1| modification methylase HgiDII [Streptococcus sanguinis SK1]
Length = 352
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 187/489 (38%), Gaps = 155/489 (31%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF G GGL G+ QAG+ +++ +Y+ N +D +LK +
Sbjct: 3 INAIDLFCGVGGLTYGVQQAGI-NVVAGYDIDDKSKFAYEYN--------NDAKFILKDI 53
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLVFTFLSFCDLF 236
+ P+ ++ +++ PCQ FS + + ++ LK L+ F +L
Sbjct: 54 KEIEDDEILALYPKDTDIKILIGCAPCQPFSSYSHKYQNNENTLKKIDLLDYFGKQIELV 113
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QP + +ENV K E+ Q L K Y+VTF V+ + YGV Q R R+++LAS
Sbjct: 114 QPDIVSMENVP---QMEKREVFQRFRTLLEKNGYKVTFKVVYAPEYGVPQMRKRLLLLAS 170
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
K G + +L+ + + Y T+RDAI +LP++ G
Sbjct: 171 KLG--------------------DISLLEPEFNSESYP--TLRDAIENLPKIKAGET--- 205
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ P H R M +NL+ + Q S P WRD
Sbjct: 206 YAKDP-LHRSRNMS--------TLNLKRIQQ-------------------SKPGGTWRD- 236
Query: 417 PNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
+ E L A KK+S GQ +
Sbjct: 237 -------------WDEDLLLEAYKKES-------------GQ-----------------S 253
Query: 477 WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNP 536
+ V GRL WD+ NTI TT P
Sbjct: 254 FGSVYGRLEWDKP------ANTI--------------------------------TTQFP 275
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVF----RGG---ICDMYKQIGNAVPPPLA 589
G+ HPEQDR L++RE A Q FP +Y F +GG I + QIGNAVPP L
Sbjct: 276 GIGNGRFGHPEQDRALSLREGALLQTFPSNYQFVSPKQGGNYPIGQVALQIGNAVPPKLG 335
Query: 590 KAIGYEIIK 598
+ IG IIK
Sbjct: 336 EIIGRSIIK 344
>gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 431
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A ++ NF CSV+ C V ++ K
Sbjct: 19 AVDLFAGAGGMSLGFEQAGF-DVLAAVEIDPIHCAVHEYNFPFCSVL---CKSVEETTGK 74
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + S E+D+I+ G PCQGFS + + R + + N LVF F QPK
Sbjct: 75 ---EIRDRSKINNQEIDVIICGSPCQGFSLMGK-RVFDDPR--NSLVFHFHRLVLELQPK 128
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ +ILQ + + YQV + VL + +YGV Q+R R+ ++ ++
Sbjct: 129 FFVMENVRGITFGEHKQILQALIYEFKSHGYQVEENYQVLNAAHYGVPQARERLFLIGAR 188
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
KLP +P+P+ + + N A S P V +AI DLP V Q
Sbjct: 189 EDVKLPKYPKPITKPAK-----SNNSKARNLSRLPL-CPNVWEAIGDLPEVEQ 235
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
L+ ++ R + Q + R A + G++ I + +H + N + A +
Sbjct: 279 LLSSSLRTKHSQATIERFAAT----VPGEREPISRFHKLHPSGVCNTLR------AGTDK 328
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
F T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP
Sbjct: 329 FKGSFTSPRPI-------HPLTPRCITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPP 381
Query: 587 PLAKAIGYEIIKCIG-NAVPPPLAKAIGYE 615
LAKA+ EII+ + + V P + +G E
Sbjct: 382 LLAKAVAREIIRRLNISPVKPNICYPLGQE 411
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|415865124|ref|ZP_11538058.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|424757713|ref|ZP_18185448.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|421949161|gb|EKU06151.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 354
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 34/237 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K D FSGCGG +G QAG+ + ++ + A+S+ ANF + + I D L+ +
Sbjct: 12 IKVFDFFSGCGGTSQGFHQAGM-DIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNA 70
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAG--PPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ L +KH D I+ PCQ +S+ N ++ + +L L+ F F +
Sbjct: 71 IN--------KLVKKHRNDYILFSGCAPCQPYSKQNSNKKNDDPRLD--LLKEFSRFVEH 120
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIF-HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ P +I +ENV G+ FNKNE +F L Y V + V+ + YGV Q+R R+V++
Sbjct: 121 YMPDFIFVENVPGMQKFNKNEGTFMMFLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLI 180
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
ASK Y + P P H N PY TV+D I++LP++ G
Sbjct: 181 ASKDFYV--ALPSPTHGVGN----------------TPYS--TVKDWIANLPKIEAG 217
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQ-GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVL 552
G P L+ RN+ V GRL+WD+ + TT G+ HP Q+R +
Sbjct: 245 GGSREFWPDELILECHRNHKGHTDVYGRLSWDKPASGL-TTRCISYSNGRFGHPTQNRAI 303
Query: 553 TVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+VRE A Q FP Y F G + +QIGNAVPP +++ IG ++ I
Sbjct: 304 SVREAACLQTFPLDYKFIGSLQSRARQIGNAVPPKMSETIGKHLLNII 351
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 20/231 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG S+E++ A+++ NF SV+ C V+K L
Sbjct: 12 AVDLFAGVGGMTLGFEQAGFDV-LASIEIDPIHCAAHEFNFPFWSVL---CQDVIK--LT 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G + + S Q ++D++ GPPCQGFS + + R L+ + N LVF FL +PK
Sbjct: 66 GE-EIRATSSIQNQDIDVVCGGPPCQGFSLIGK-RVLDDER--NSLVFHFLRLVLELKPK 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+ ++L+ + + YQV + VL + N+GV Q+R R+ +L +
Sbjct: 122 YFVMENVAGMGIGKSQQLLEELIKKFQENGYQVQLPYQVLNASNFGVPQNRKRLFLLGCR 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
LP++P+P+ + + N S TV DAI DLP +
Sbjct: 182 QDQTLPNYPKPMTKPPEAKVMLLNCYLPN--------SPTVEDAIIDLPEI 224
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 325 TSPRPI-------HPYHPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPFLAKA 377
Query: 592 IGYEIIKCIG 601
+ EI K +G
Sbjct: 378 VAQEIRKVLG 387
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A + NF SV +D + + ++
Sbjct: 16 AVDLFAGSGGMTLGFEQAGFDV-LAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSSDKIR 74
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
++ K ++D++ GPPCQGFS + + R LE + N LVF F+ +PK
Sbjct: 75 IYSSIKN------QDIDVVFGGPPCQGFSLMGK-RLLEDPR--NLLVFHFVRIVAELKPK 125
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
+ + ENV G+ +Q + + YQV + VL + YGV Q R R+ +L +
Sbjct: 126 FFVFENVKGMASGKHQNFIQELINKFEYYGYQVQQPYQVLNAAYYGVPQKRERLFLLGCR 185
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
LP++P+P F + VA + SH P + TVR+A+ DLP++
Sbjct: 186 EDLALPNYPEP-------TFQPPYSQVAKRYSHLP-PTPTVREALQDLPKI 228
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F +QIGN+VPP LA+A
Sbjct: 329 TSPRPI-------HPFIPRCITVREAARLHSYPDWFRFHVTKWHGCRQIGNSVPPLLAQA 381
Query: 592 IGYEIIKCI 600
+ E+IK +
Sbjct: 382 VAAEMIKLL 390
>gi|353236422|emb|CCA68417.1| hypothetical protein PIIN_02281 [Piriformospora indica DSM 11827]
Length = 1109
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 36/256 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L CLDLFSG GGL GL +G + W+VE + S AA+ FQ+ N + L
Sbjct: 649 LHCLDLFSGAGGLSLGLEASGAVQTKWAVEYDSSSAAT----FQQAHPDAIMFNTCINKL 704
Query: 178 LKGHTQHKGVS-----------LPQKHEVDLIVAGPPCQGFSQL-----NRARELEKSKL 221
L G Q P+ EVD+IV GPPC+ S R R +
Sbjct: 705 LSGVQQRDDAGELDRNSPQLDQFPKPGEVDIIVGGPPCRPSSAYLRRLGKRPRSPDIQTW 764
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI---LQCIFHCLLKMNYQVTFDVLQ 278
+N ++ +Y + +G + NE+ L + + +L +YQV + VL
Sbjct: 765 RNPNKSLYVGR------RYTERGHHSGQAPTHGNEVCRFLTNVSYLMLIGSYQVRYGVLN 818
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQP----LHAFSNQLFTINGNLVA---NKTSHA 331
+G +GV Q R RV ++A+K G LP PQP +HA N + G + + ++A
Sbjct: 819 AGQHGVPQIRRRVFVIAAKRGNLLPDLPQPTHVAMHATHNTVTVEEGKVYTVSRRRENNA 878
Query: 332 PYRSITVRDAISDLPR 347
P ++TV DAI+DLP+
Sbjct: 879 PLYAVTVGDAITDLPQ 894
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 550 RVLTVREYARAQGFPDSYVFR---GGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
R+LT+RE AR+QGFPD FR + + +QIGNAVP PLA A+G EI K
Sbjct: 1043 RILTIREAARSQGFPDHIDFRHEDNNVKLITQQIGNAVPVPLAAAVGREIAKA 1095
>gi|427738987|ref|YP_007058531.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374028|gb|AFY57984.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 429
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 114/231 (49%), Gaps = 17/231 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VEL+ A ++ NF S + C V K +
Sbjct: 5 AVDLFAGAGGMTLGFEQAGF-DVLAAVELDPIHCAVHEFNFPFWSTL---CARVEK--IS 58
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G + +S + E+D++ G PCQGFS + + R L+ + N LVF FL QPK
Sbjct: 59 GKKIRR-LSTIRNKEIDVVFGGSPCQGFSMMGK-RALDDPR--NSLVFHFLRLILELQPK 114
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y + ENV GL L + K Y+V + VL + NYGV Q R R+ I +
Sbjct: 115 YFVFENVPGLTVGEHRIFLSTVIAEFEKNGYRVEANYQVLNAANYGVPQDRARLFIFGCR 174
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
G LP +PQPL A ++ + +V N A + TV DAI DLP V
Sbjct: 175 QGLNLPKYPQPLTA--PKISKKSKYIVNNPDLPA---TPTVWDAICDLPEV 220
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 321 TSPRPI-------HPVTPRCITVREAARLHSYPDWFRFHLTKWHGFRQIGNSVPPLLAKA 373
Query: 592 IGYEIIKCI 600
I EII+ +
Sbjct: 374 IATEIIRAL 382
>gi|419881089|ref|ZP_14402439.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|421776835|ref|ZP_16213437.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|432850040|ref|ZP_20081021.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
gi|388366340|gb|EIL30076.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|408458217|gb|EKJ82006.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|431400932|gb|ELG84290.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
Length = 346
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 34/237 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K D FSGCGG +G QAG+ + ++ + A+S+ ANF + + I D L+ +
Sbjct: 4 IKVFDFFSGCGGTSQGFHQAGM-DIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNA 62
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAG--PPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ L +KH D I+ PCQ +S+ N ++ + +L L+ F F +
Sbjct: 63 IN--------KLVKKHRNDYILFSGCAPCQPYSKQNSNKKNDDPRLD--LLKEFSRFVEH 112
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIF-HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ P +I +ENV G+ FNKNE +F L Y V + V+ + YGV Q+R R+V++
Sbjct: 113 YMPDFIFVENVPGMQKFNKNEGTFMMFLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLI 172
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
ASK Y + P P H N PY TV+D I++LP++ G
Sbjct: 173 ASKDFYV--ALPSPTHGVGN----------------TPYS--TVKDWIANLPKIEAG 209
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQ-GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVL 552
G P L+ RN+ V GRL+WD+ + TT G+ HP Q+R +
Sbjct: 237 GGSREFWPDELILECHRNHKGHTDVYGRLSWDKPASGL-TTRCISYSNGRFGHPTQNRAI 295
Query: 553 TVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+VRE A Q FP Y F G + +QIGNAVPP +++ IG ++ I
Sbjct: 296 SVREAACLQTFPLDYKFIGSLQSRARQIGNAVPPKMSETIGKHLLNII 343
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LD F+G GG G AG A ++E++ ++ N +I+ D +KG
Sbjct: 43 LDTFAGAGGFSLGFQWAG-AHIIGAIEIDEWAGETFQFNHPNAHLIKGD--------IKG 93
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
T + + + + +I+ G PCQGFS N+ + ++ +N + + L QP+
Sbjct: 94 ITDEQILDTFGEIKPHIILGGIPCQGFSICNQNKG-DRQDSRNYMFQDLIRISSLLQPEI 152
Query: 241 IILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
II+ENV L+ N+ ++ I L + YQV + +L + +YG+ Q R R+ ILA +
Sbjct: 153 IIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFILAHR 212
Query: 298 PGYKLPSFPQPLHAFSNQ--LFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGAN 353
P FPQP H SNQ LFT H + ++ +AISDLP + +GA
Sbjct: 213 CDLTHP-FPQPTHTTSNQTELFT-----------HNLKKCPSLWEAISDLPDIDAGEGAE 260
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
++ P +Q+++++GS + + +H M+ RL+ F + W
Sbjct: 261 EMEYNKCPDHEYQQILRNGS----------DRVFNHKA------MKHSQRLVQRFASMGW 304
Query: 414 ----RDLPNICVKLPRGQHSYTEKL 434
D+PN L R H +++K+
Sbjct: 305 GDSTSDVPNHLRPLKRNSHQFSDKI 329
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 20/82 (24%)
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG-------------------ICDM 576
P + +HP ++R T RE AR Q FPD YVF+G +C
Sbjct: 347 PASFYANFVHPYKNRNFTAREGARIQSFPDWYVFKGKPTVVSHKLLEREGRLAEKHLC-Q 405
Query: 577 YKQIGNAVPPPLAKAIGYEIIK 598
Y QIGNAVPP +AKAI + K
Sbjct: 406 YNQIGNAVPPLMAKAIAENLFK 427
>gi|428211715|ref|YP_007084859.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000096|gb|AFY80939.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 434
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A+++ NF + V+ L++
Sbjct: 9 AVDLFAGAGGMTLGFEQAGFDV-LAAVEIDPIHCATHEYNFPQWKVLCRSVVEATGDLIR 67
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+Q E+D++ GPPCQGFS + + R L+ + N LVF F+ QPK
Sbjct: 68 TQSQIG------SREIDVVCGGPPCQGFSLMGK-RALDDPR--NSLVFHFIRIVTELQPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV GL ++L + YQV + VL S +YGV Q+R R+ ++ +
Sbjct: 119 YFVMENVRGLTIGPHKQLLDEVIDKFHDSGYQVLTPYQVLNSAHYGVPQNRERLFLIGCR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
G LP +P P + G + S P + TV +AI DLPRV
Sbjct: 179 EGLSLPDYPTP-------ITNPPGCKKLRQLSDLP-ATPTVWEAIQDLPRV 221
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP + R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 322 TSPRPI-------HPFEPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 374
Query: 592 IGYEIIKCIGNA 603
+ EII+ +G A
Sbjct: 375 VAAEIIQVLGIA 386
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LD F+G GG G AG A ++E++ ++ N +I+ D +KG
Sbjct: 2 LDTFAGAGGFSLGFQWAG-AHIIGAIEIDEWAGETFQFNHPNAHLIKGD--------IKG 52
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
T + + + + +I+ G PCQGFS N+ + ++ +N + + L QP+
Sbjct: 53 ITDEQILDTFGEIKPHIILGGIPCQGFSICNQNKG-DRQDSRNYMFQDLIRISSLLQPEI 111
Query: 241 IILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
II+ENV L+ N+ ++ I L + YQV + +L + +YG+ Q R R+ ILA +
Sbjct: 112 IIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFILAHR 171
Query: 298 PGYKLPSFPQPLHAFSNQ--LFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGAN 353
P FPQP H SNQ LFT H + ++ +AISDLP + +GA
Sbjct: 172 CDLTHP-FPQPTHTTSNQTELFT-----------HNLKKCPSLWEAISDLPDIDAGEGAE 219
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
++ P +Q+++++GS + + +H M+ RL+ F + W
Sbjct: 220 EMEYNKCPDHEYQQILRNGS----------DRVFNHKA------MKHSQRLVQRFASMGW 263
Query: 414 ----RDLPNICVKLPRGQHSYTEKL 434
D+PN L R H +++K+
Sbjct: 264 GDSTSDVPNHLRPLKRNSHQFSDKI 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 20/82 (24%)
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG-------------------ICDM 576
P + +HP ++R T RE AR Q FPD YVF+G +C
Sbjct: 306 PASFYANFVHPYKNRNFTAREGARIQSFPDWYVFKGKPTVVSHKLLEREGRLAEKHLC-Q 364
Query: 577 YKQIGNAVPPPLAKAIGYEIIK 598
Y QIGNAVPP +AKAI + K
Sbjct: 365 YNQIGNAVPPLMAKAIAENLFK 386
>gi|400598697|gb|EJP66406.1| DNA methyltransferase Dim-2 [Beauveria bassiana ARSEF 2860]
Length = 1142
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV------IQDDCN 171
L+ LDLF G G GL + G W+ ++ +Y AN + + I D
Sbjct: 683 LRGLDLFCGGGNFGRGLEEGGSVTMKWANDVNSKALHTYMANTEPGQIYPFLGSIDDFQR 742
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
L + + +PQ EVD I G PC GFSQL +E + + LV F S
Sbjct: 743 LAFQGRFADN-------IPQVGEVDFISGGSPCPGFSQLTNDKETDAQRKNQSLVAAFAS 795
Query: 232 FCDLFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
DL++PKY ILENV G++ ++N ++ + L+ M YQ +L + + G AQ R
Sbjct: 796 CVDLYRPKYGILENVAGIIQKHQNRGHDVFSQLMCALVGMGYQARLVLLDALSCGSAQVR 855
Query: 289 NRVVILASKPGYKLPSFPQPLHA 311
+RV I+ + PG+ LP P H+
Sbjct: 856 SRVFIIFAAPGWTLPEAPIQTHS 878
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 502 WSLVHTASRNNNWQG-VLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYAR 559
+SL A+ + + Q GR ++ TIVT +P + KQG+ +H +DR L+V E R
Sbjct: 992 FSLRGEATMSTSIQSRAYGRQPPNQPMATIVTRASPRDAKQGRTIHWSEDRCLSVMEAKR 1051
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
QGF D + G Y+ IGN+V ++ A+G + +
Sbjct: 1052 GQGFLDEELLLGSADVQYRIIGNSVAREVSLALGVVFAEAV 1092
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 53/275 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAG-VAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L+ D +SG GGL G+ + + ++V+++ S ++ AN E DD N L+S
Sbjct: 300 LRMFDPYSGPGGLSLGIERGSRCIRSSYAVDIDESTVKTFCAN-SEAVCFHDDANHFLES 358
Query: 177 LL-----------KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+L + H+ G + VD+I AG PCQG S+LN R ++ + N
Sbjct: 359 ILVRGSRITSIDGRTHSLQAGANF----NVDVICAGVPCQGHSRLNIHRGSKEGEHNNQQ 414
Query: 226 VFTFLSFCDLFQPKYIILENVTGL----------------VHFNKNEILQCIFHCLLKMN 269
+ T LS ++ +P+Y+ +ENV + + + + L+ LL +
Sbjct: 415 MLTALSLVEVLRPRYVCIENVPAIDKWALKMRRETDDGIPIAADPHGGLRLTITILLALG 474
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF-SNQLFTI--------- 319
YQV +LQ+GNYG QSR R ++LA++ G LP P+P+ AF S+ T+
Sbjct: 475 YQVRVGILQAGNYGTPQSRRRFILLAAEFGSTLPDLPRPITAFDSHHGLTLKSFPKVKVP 534
Query: 320 ---------NGNLVANKTSHAPYRSITVRDAISDL 345
G+ + + P+ S+TV DAI DL
Sbjct: 535 WPVWDDEDTEGDTFQSPL-YVPHCSVTVGDAIGDL 568
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL D++F T+VT +P KQ +++HP Q+R+++VRE AR QGFPDS+ F G I +M Q
Sbjct: 687 RLNNDDAFSTLVTKVHPTGKQSQVIHPSQNRLISVREMARGQGFPDSFRFEGSITEMQHQ 746
Query: 580 IGNAVPPPLAKAIGYEI 596
+GNAVP PL +AIG +I
Sbjct: 747 LGNAVPVPLGEAIGRQI 763
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
K LD+F+G GG G AG +E+++ + N E ++ D +
Sbjct: 5 FKVLDIFAGAGGFSLGFKMAG-GTLVGGIEIDQWAGETLAYNHPETQIVIRDIQTI---- 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + +SL + ++ ++I+ GPPCQGFS + R K +N L F+ F +F+
Sbjct: 60 ----SDEEAISLFKYNKPNVIIGGPPCQGFSVCRQGRGDAKDP-RNTLFQEFIRFGSIFE 114
Query: 238 PKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
P +++ENV L + ++ I L+K+ Y V + VL + +YG+ Q+R R+ I+
Sbjct: 115 PDLMLMENVPNLAKIKTKSDQAVIDIIKDELIKLGYHVDYSVLNATDYGIPQNRRRLFIV 174
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP--RVSQGA 352
ASK P FP H ++Q L + S P T+ DAISDLP +GA
Sbjct: 175 ASKVKITHP-FPPSTHTIASQ-----SQLSFWENSLLP--CPTLWDAISDLPILEAGEGA 226
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ PP+T +Q+ ++ + LL +H M R++ F +
Sbjct: 227 EKISYSKPPETDYQKRLRGNCK----------LLYNHKA------MNHTKRMVERFSSMS 270
Query: 413 WRD 415
W D
Sbjct: 271 WGD 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 20/82 (24%)
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG-------------------ICDM 576
P + +HP +R T RE AR Q FPD Y+FRG +C
Sbjct: 314 PASFYANFVHPYYNRNFTAREGARIQSFPDHYLFRGKPTVVSHKLLAREGRENEKFLC-Q 372
Query: 577 YKQIGNAVPPPLAKAIGYEIIK 598
Y QIGNAVPP LA+ I + + +
Sbjct: 373 YNQIGNAVPPLLAQQIAHHLFE 394
>gi|326485515|gb|EGE09525.1| DNA methyltransferase Dim-2 [Trichophyton equinum CBS 127.97]
Length = 1090
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+LFSG G GL + G + W+VE + +Y AN + ++ C V L
Sbjct: 637 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 696
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T + + + +V I AG PCQG+S N +E E S + ++ + S+ DL++
Sbjct: 697 FQAITGKENTYVARIGDVHFISAGSPCQGYSSANAHKENEISMRNSSMIASVASYIDLYR 756
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENVTG+ +K L + + M YQ L + ++G QSR+R+ I +
Sbjct: 757 PQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWSFGAPQSRSRLFIAIT 816
Query: 297 KPGYKLPSFPQPLHAF-----SNQLF-TINGNLVANKTSHAP-YRSITVRDAISDLPRV 348
PG + P H+ S L NG + P + ++ R A DLP +
Sbjct: 817 APGLHILEHPALTHSHPPGTKSRALGDNPNGLTFGERRWDIPVFDFVSARSATQDLPPI 875
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQG 562
L H+A R ++ F T+ T P G+ LH ++DR++TV+E RAQG
Sbjct: 926 LEHSARTKAAHSKAWSRTHPEKLFPTVTTGVCPFCIFTGQWLHWQEDRLVTVQEVRRAQG 985
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
+PD+ V G +K +GN+V +A A+G + + CI N
Sbjct: 986 YPDNEVLIGRPVHQWKIVGNSVARQVALALGLAVREACIRN 1026
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG GG+ G +AG +S+E A +Y NF + ++I D + +
Sbjct: 2 LNYIDLFSGAGGMSCGFEKAGFEN-IFSLEFNPEFAETYKKNFPKNNLIVKDIADISEPE 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K + + +VD+IV GPPCQGFS R +N L F+ + +
Sbjct: 61 VK--------KIIGETDVDVIVGGPPCQGFSLAGRIGRTFIEDDRNYLFNEFVRIVSIVK 112
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ ILENV + N + I + K++Y V ++VLQ+ +YG+ Q R R++I+ +K
Sbjct: 113 PEMFILENVARMARHNNGNTIIEIINEFKKIDYDVKYEVLQTSDYGIPQRRKRIIIVGTK 172
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
Y FP+ ++ ITV+DAI DLP + +
Sbjct: 173 -DYTF-EFPKKNNSV-----------------------ITVKDAIDDLPTLKSAEESNIP 207
Query: 358 HNPPKTHFQRMM------KDGSRIHDIHINLR 383
++ H +M+ KDG +DI LR
Sbjct: 208 NHNAMNHSDQMLEKMSYIKDGGDRYDIPEKLR 239
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 533 TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
+P KI H Q+R LT RE AR Q FPD ++F G + ++IGNAVPP LA +
Sbjct: 257 SPTVTGDMRKIFHYSQNRALTQRELARLQTFPDDFIFVGNSTKIQQEIGNAVPPKLAYKL 316
Query: 593 GYEI 596
++
Sbjct: 317 ALKV 320
>gi|421543479|ref|ZP_15989571.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|421545540|ref|ZP_15991600.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|421547595|ref|ZP_15993627.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|421551817|ref|ZP_15997800.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|402325768|gb|EJU61175.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|402326590|gb|EJU61990.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|402327615|gb|EJU63002.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|402333157|gb|EJU68469.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
Length = 326
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
>gi|385339121|ref|YP_005892993.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|385854261|ref|YP_005900774.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|416176215|ref|ZP_11609516.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|416190835|ref|ZP_11615946.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|433466202|ref|ZP_20423666.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|433468283|ref|ZP_20425722.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|433491538|ref|ZP_20448641.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|433495787|ref|ZP_20452837.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|433497778|ref|ZP_20454798.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|433499860|ref|ZP_20456854.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|433502032|ref|ZP_20459005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|433508261|ref|ZP_20465147.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|432205525|gb|ELK61553.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|432206688|gb|ELK62691.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|432231223|gb|ELK86890.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|432237429|gb|ELK93023.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|432237813|gb|ELK93403.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|432237998|gb|ELK93582.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|432243787|gb|ELK99293.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|432249912|gb|ELL05310.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
Length = 332
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
K+ H EQ+R LTVRE A Q FPD+++F G +Q+GNAVPP LAKAI I+K
Sbjct: 272 KVFHYEQNRALTVRELAALQSFPDNFIFCGSKIAQ-QQVGNAVPPLLAKAIAESILKMSE 330
Query: 602 N 602
N
Sbjct: 331 N 331
>gi|421564461|ref|ZP_16010260.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|402346058|gb|EJU81162.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
Length = 276
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSTQMLEKMAFVKNGGNRNDIPEPLR 245
>gi|326476794|gb|EGE00804.1| hypothetical protein TESG_08096 [Trichophyton tonsurans CBS 112818]
Length = 986
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+LFSG G GL + G + W+VE + +Y AN + ++ C V L
Sbjct: 533 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 592
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T + + + +V I AG PCQG+S N +E E S + ++ + S+ DL++
Sbjct: 593 FQAITGKENTYVARIGDVHFISAGSPCQGYSSANAHKENEISMRNSSMIASVASYIDLYR 652
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENVTG+ +K L + + M YQ L + ++G QSR+R+ I +
Sbjct: 653 PQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWSFGAPQSRSRLFIAIT 712
Query: 297 KPGYKLPSFPQPLHAF-----SNQLF-TINGNLVANKTSHAP-YRSITVRDAISDLPRV 348
PG + P H+ S L NG + P + ++ R A DLP +
Sbjct: 713 APGLHILEHPALTHSHPPGTKSRALGDNPNGLTFGERRWDIPVFDFVSARSATQDLPPI 771
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQG 562
L H+A R ++ F T+ T P G+ LH ++DR++TV+E RAQG
Sbjct: 822 LEHSARTKAAHSKAWSRTHPEKLFPTVTTGVCPFCIFTGQWLHWQEDRLVTVQEVRRAQG 881
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
+PD+ V G +K +GN+V +A A+G + + CI N
Sbjct: 882 YPDNEVLIGRPVHQWKIVGNSVARQVALALGLAVREACIRN 922
>gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|416199504|ref|ZP_11619409.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|421537095|ref|ZP_15983285.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|421541419|ref|ZP_15987539.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|421549637|ref|ZP_15995648.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|421553827|ref|ZP_15999780.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|421556067|ref|ZP_16001984.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|421560236|ref|ZP_16006095.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|421566550|ref|ZP_16012294.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|427826168|ref|ZP_18993227.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|433464072|ref|ZP_20421567.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|433470383|ref|ZP_20427783.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|433472462|ref|ZP_20429833.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|433474559|ref|ZP_20431907.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|433476647|ref|ZP_20433975.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|433478804|ref|ZP_20436104.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|433480890|ref|ZP_20438163.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|433483014|ref|ZP_20440255.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|433485106|ref|ZP_20442314.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|433487265|ref|ZP_20444444.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|433489438|ref|ZP_20446577.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|433493661|ref|ZP_20450737.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|433504001|ref|ZP_20460946.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|433506124|ref|ZP_20463045.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|433510361|ref|ZP_20467206.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|433512444|ref|ZP_20469247.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|433514551|ref|ZP_20471328.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|433516661|ref|ZP_20473415.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|433518863|ref|ZP_20475591.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|433520863|ref|ZP_20477566.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|433522982|ref|ZP_20479656.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|433525099|ref|ZP_20481746.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|433527239|ref|ZP_20483852.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|433529338|ref|ZP_20485938.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|433531455|ref|ZP_20488025.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|433533666|ref|ZP_20490215.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|433535665|ref|ZP_20492185.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|433537829|ref|ZP_20494316.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|433540017|ref|ZP_20496475.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis]
gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|389604691|emb|CCA43617.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
alpha522]
gi|402320092|gb|EJU55590.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|402320113|gb|EJU55610.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|402332286|gb|EJU67615.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|402334394|gb|EJU69683.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|402337920|gb|EJU73159.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402340409|gb|EJU75609.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|402345154|gb|EJU80278.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|432206110|gb|ELK62123.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|432211816|gb|ELK67760.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|432212599|gb|ELK68535.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|432212619|gb|ELK68554.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|432217800|gb|ELK73665.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|432219012|gb|ELK74862.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|432219510|gb|ELK75354.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|432224172|gb|ELK79944.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|432225065|gb|ELK80820.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|432226030|gb|ELK81763.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|432230434|gb|ELK86109.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|432231839|gb|ELK87494.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|432243384|gb|ELK98895.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|432244399|gb|ELK99889.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|432250639|gb|ELL06030.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|432250717|gb|ELL06105.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|432256453|gb|ELL11775.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|432256685|gb|ELL12005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|432256972|gb|ELL12281.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|432262846|gb|ELL18078.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|432263061|gb|ELL18289.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|432263610|gb|ELL18826.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|432267308|gb|ELL22486.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|432269720|gb|ELL24874.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|432269989|gb|ELL25136.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|432274219|gb|ELL29312.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|432275969|gb|ELL31031.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|432276676|gb|ELL31731.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|432278226|gb|ELL33269.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
Length = 276
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
>gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
Length = 375
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 39/255 (15%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
TP K +DLF G GGL G QAG +P ++++ +R A +Y NF + +I D +
Sbjct: 28 TPPKLIDLFCGAGGLTLGFVQAGF-RPVFAIDDDRHAAETYRLNFGD-HIICGDIRQI-- 83
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE---LEKSKLKNGLVFTFLSF 232
S P D+++ GPPCQGFS+L + EKS NGL ++
Sbjct: 84 -----------ESFP---AADVVIGGPPCQGFSRLGKQTHGLPTEKSYEGNGLWAEYMRC 129
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+ QPK ++ENV F K+ + I ++ YQ+ VL + ++GV Q R R +
Sbjct: 130 VEQAQPKLFVVENVP---DFFKHFAWEGIQREAARLGYQLAHAVLHAADFGVPQKRQRAI 186
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
I+ S+ G P P P H Q + G V +R TVRDAI DLP
Sbjct: 187 IIGSRVGK--PRLPMPTH---QQKLNLLGQPV--------WR--TVRDAIGDLPLEPNNI 231
Query: 353 NCYLFHNPPKTHFQR 367
N + F N + +R
Sbjct: 232 NRHDFRNASELSIRR 246
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
++GRL WD+ TI T K G+ LHP+ R +TVRE AR Q FPD + F G
Sbjct: 281 LMGRLLWDQPALTIRTEFLKPEK-GRYLHPQAHRSITVREGARLQTFPDDFKFAGSNYQA 339
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
KQIGNAVP LA+ I ++ +
Sbjct: 340 AKQIGNAVPVLLARRIAETVLALM 363
>gi|421558133|ref|ZP_16004018.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|402338905|gb|EJU74134.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
Length = 333
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
K+ H EQ+R LTVRE A Q FPD+++F G +Q+GNAVPP LAKAI I+K
Sbjct: 272 KVFHYEQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSE 331
Query: 602 N 602
N
Sbjct: 332 N 332
>gi|427718814|ref|YP_007066808.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427351250|gb|AFY33974.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 418
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 19/236 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A ++ NF SV+ C V+++ +
Sbjct: 12 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCAVHEFNFPFWSVL---CKSVVETTGE 67
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q + E+D+++ G PCQGFS + + R + + N LVF F QPK
Sbjct: 68 EIRQRSEIG---DREIDVVICGSPCQGFSLMGK-RVFDDPR--NSLVFHFHRLVLELQPK 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+ +ILQ + + Y V + VL + +YGV Q+R R+ +L ++
Sbjct: 122 YFVMENVRGITLGEHKKILQTLINEFQAKGYTVEENYQVLNAAHYGVPQARERLFLLGAR 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+LP +PQP+ + K S+ P S TV DAI D+P V Q A+
Sbjct: 182 EDVELPKYPQPITK------PAKPHKSKIKLSNLP-TSPTVWDAIKDIPEVEQYAD 230
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A + + T+P P+ HP R +TVRE AR +PD + F ++Q+G
Sbjct: 316 AGTDKYKGSFTSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVG 368
Query: 582 NAVPPPLAKAIGYEIIKCIGNAVP 605
N+VPP LAKA+ EII+ + N VP
Sbjct: 369 NSVPPLLAKAVAMEIIRSL-NVVP 391
>gi|427708365|ref|YP_007050742.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
gi|427360870|gb|AFY43592.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
Length = 413
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A+++ NF C+V+ C V + +
Sbjct: 8 AVDLFAGAGGMSLGFEQAGF-DVLAAVEIDPIHCATHEFNFPSCTVL---CKSVEDTTGE 63
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q + E+D ++ G PCQGFS + + R + + N LVF F QPK
Sbjct: 64 EIRQRAKIG---DREIDAVICGSPCQGFSLMGK-RVFDDPR--NSLVFHFHRLVLELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV G+ +IL+ + YQV + VL + +YGV QSR R+ +L ++
Sbjct: 118 YFVMENVRGITVGEHKQILKSLISEFQSHGYQVEENYQVLNAAHYGVPQSRERLFLLGAR 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
KLP +P+ + Q+ N + N +P TV DAI D+P V
Sbjct: 178 RDVKLPKYPKAI----TQIAKPNQLIKKNALPLSP----TVWDAIGDIPEV 220
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 492 MTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRV 551
+ G++ I + +H A N + A + + T+P P+ HP R
Sbjct: 287 LQGEREPISRFHKLHPAGVCNTLR------AGTDRYRGSFTSPRPI-------HPFTPRC 333
Query: 552 LTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVP--PPLA 609
+TVRE AR +PD + F ++Q+GN+VPP LAKA+ EII+ + +P P +
Sbjct: 334 ITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPPLLAKAVAQEIIRSL-KVIPIKPSFS 392
Query: 610 KAIGYE 615
+ +G E
Sbjct: 393 QQLGDE 398
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 140/315 (44%), Gaps = 55/315 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN-LVLKSLL 178
+DLF G GGL GL AG + +L + +++A I L ++ L+
Sbjct: 5 AIDLFCGAGGLSAGLEMAGFTVLAGN-DLFDAAGRTFEATHPRAKFISGPIEELSVERLM 63
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ V+ +K E+ ++V GPPCQ +S N R + ++ L +L D +P
Sbjct: 64 E-------VTGLRKGELSVLVGGPPCQAYSVYNHQRGMHDARAS--LFREYLRIVDGLRP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++I++ENVTG+ E ++ I + Y V VL++ +YGV Q R RVV + ++
Sbjct: 115 EWIVMENVTGIYSIANGEAVRAIKAEFAALGYAVEDAVLRAEDYGVPQERRRVVFIGNRV 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRS---ITVRDAISDLPRVSQGAN-- 353
G + S P+P +H P R+ +RDAI DLP + G N
Sbjct: 175 GAPI-SHPEP--------------------THGPGRANPFTKIRDAIGDLPPLDNGENPG 213
Query: 354 --CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA 411
Y P K +QR M+ G+ I + +H L + R+ IP P
Sbjct: 214 RVAYADARPSK--YQRQMR-GNAI---------TVGNHAAPRLGKVNMDRLPYIP--PGG 259
Query: 412 DWRDLPNICVKLPRG 426
WRD+P+ LP G
Sbjct: 260 SWRDIPHDL--LPEG 272
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GR+ WD T++T + G +HPEQDR ++VRE AR Q FPD + F G + Y
Sbjct: 286 GRMTWDGLSCTVLTKCD--IHWGAYIHPEQDRAISVREAARLQAFPDWFEFAGSKTEQYV 343
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPP L KA+G +++ +
Sbjct: 344 QVGNAVPPLLGKAVGDHLMQLM 365
>gi|421539258|ref|ZP_15985420.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
gi|402321838|gb|EJU57309.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
Length = 333
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 40/61 (65%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
K+ H EQ+R LTVRE A Q FPD++VF G +Q+GNAVPP LAKAI I+K
Sbjct: 272 KVFHYEQNRALTVRELAALQSFPDNFVFCGNKIAQQQQVGNAVPPLLAKAIAESILKMSE 331
Query: 602 N 602
N
Sbjct: 332 N 332
>gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella
pneumoniae]
Length = 375
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 183/486 (37%), Gaps = 150/486 (30%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L C++ F G GG+ GL QAG + ++ + +Y+ N I + C + S+
Sbjct: 10 LTCIEGFCGAGGMSLGLKQAGFDVR-LAFDINENAVETYNKN------IGNHCEKLDASI 62
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ G + + K +DL GPPCQGFS+ R L +N LV + + +
Sbjct: 63 VSGKFLLEKAGI--KTRLDLFSGGPPCQGFSKQRRGAHLLDDD-RNKLVLEYSRLVNELK 119
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA-- 295
P+ + ENV +++ I L N F + S ++GVAQ R R +++
Sbjct: 120 PRAFLFENVEIFGQKRGKDLIDEIKSKLFDYNIYTYF--ICSSDFGVAQKRGRFLMIGID 177
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
G +P L ++KT +T+RD I LP
Sbjct: 178 KSEGKIVPKL-----------------LKSDKT-------LTIRDVIGQLP--------- 204
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHI-CKILSPLMEMRIRLIPSFPNADWR 414
PP ++ + +HI CKI + + E R +P P W+
Sbjct: 205 ----PPPEDYKEHPD---------------IPNHIKCKI-TKINEERFSHVP--PGGGWK 242
Query: 415 DLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRN 474
D+P Y +LK + K V TAS
Sbjct: 243 DIP------------YDLRLKCHQK----------------------------VDTAS-- 260
Query: 475 NNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTP 534
W V GRL WD+ Q TI FD+
Sbjct: 261 GGWPDVYGRLEWDK------QCPTIT------------------------AGFDSFT--- 287
Query: 535 NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY 594
+G+ HP Q+R +T+RE A QGFP +Y F G + QIGNAVPPP++ A G
Sbjct: 288 -----RGRYGHPSQNRAITLREGAMLQGFPVNYRFYGNRDAIRLQIGNAVPPPVSYAAGT 342
Query: 595 EIIKCI 600
II C+
Sbjct: 343 AIINCL 348
>gi|429190201|ref|YP_007175879.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|429134419|gb|AFZ71430.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
Length = 403
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 151/349 (43%), Gaps = 45/349 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+G GGL GL +AG + +VE++ +++ N S DD ++ +
Sbjct: 6 LTYVDLFAGAGGLSIGLEKAGF-ELVHAVEVDEDARSTFARNRDGMS--PDDITGDIRDV 62
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
H+ + L + +DL+ GPPCQGFS++ + S +N L F+S+ + +
Sbjct: 63 ----DNHEIIDLVDQRSIDLVAGGPPCQGFSEVVSP---DGSDDRNHLFTNFISWVNELE 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK + ENV G+ + + L+ + + Y VT V+ S ++GV Q R R+V +A++
Sbjct: 116 PKAALFENVRGIQNTAGGKFLEAVEKSFDLIGYDVTHRVINSSDFGVPQHRRRLVAIATR 175
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
+ H F F +N P + V D I DLP V G +
Sbjct: 176 KDVR-------EHPFDG--FELN-----------PVETPGVMDGIGDLPEVGPGEEITEY 215
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P+T Q+ +++GS + L HI S M + +I P+ R
Sbjct: 216 DTEPRTLLQKDLRNGS----------DELSHHIAASHSQDM---VEMISHIPDGGNRTAI 262
Query: 418 NICVKLPRGQHSYTEKLKYN--AKKKKSVCDCKSSSSCTSKGQKNTIIP 464
++ G H+ +LK + A S SS+ C Q + P
Sbjct: 263 PDELQPSSGYHNSYSRLKSDEPAVAITSNMSKPSSARCIHPFQDRGLTP 311
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G T IP L ++ +N++ RL DE +T+ + +HP QDR LT
Sbjct: 256 GGNRTAIPDELQPSSGYHNSYS----RLKSDEPA-VAITSNMSKPSSARCIHPFQDRGLT 310
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPD+Y F GG+ + +QIGNAVPP L +A+GY + + + N
Sbjct: 311 PREGARLQTFPDTYRFDGGLVSVRQQIGNAVPPYLGEALGYYLRESVYN 359
>gi|414079463|ref|YP_007000887.1| DNA 5-cytosine methylase [Anabaena sp. 90]
gi|413972742|gb|AFW96830.1| DNA 5-cytosine methylase [Anabaena sp. 90]
Length = 415
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 31/238 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A + NF +VI C V ++ K
Sbjct: 8 AVDLFAGAGGMTLGFEQAGF-DILASVEIDPIHCAIHKFNFPFWTVI---CKSVEETTGK 63
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + S E+D++ GPPCQGFS + + R + + N LVF F+ QPK
Sbjct: 64 ---EIRNSSQIANQEIDVVFGGPPCQGFSLIGK-RSFDDPR--NSLVFHFIRLVVELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ +LENV G+ E + I + + YQ+ + VL + NYGV Q+R R+ +L ++
Sbjct: 118 FFVLENVKGMTVGKHKEFIAEIINQFTESGYQIDANYQVLNAANYGVPQNRERLFLLGAR 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
+LP +P+ + F NQ S TV DA+ DLP + Y
Sbjct: 178 EDLELPKYPEKI-TFPNQT------------------SPTVWDALQDLPAIENYPELY 216
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LA+A
Sbjct: 310 TSPRPI-------HPFIPRCITVREAARLHSYPDWFRFHPTKWHGFRQIGNSVPPLLAQA 362
Query: 592 IGYEIIKCI 600
+ EIIK +
Sbjct: 363 VAEEIIKVL 371
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 21/232 (9%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ + NF S+I D + ++
Sbjct: 8 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCLVHHYNFPFWSIICRDIQTITGQEIR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+S H +D++ GPPCQGFS + + R LE + N L+ F+ QPK
Sbjct: 67 Q------LSKVGNHPIDVVFGGPPCQGFSLMGK-RVLEDER--NALIAHFIRLVLELQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y +LENV G+ + ++LQ IF Y+V + +L + NYGV Q+R R+ +L +
Sbjct: 118 YFVLENVPGMAIGSHQQLLQEIFDKFSYHGYEVETNYQILNAANYGVPQNRERLFLLGCQ 177
Query: 298 PGYKLPSFPQPL-HAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
G LP++PQ + + F+N+ N + P + TV +AI DLP V
Sbjct: 178 KGLILPNYPQAISYNFTNK-------SEPNNQLNLP-KCPTVWEAIKDLPEV 221
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 322 TAPRPI-------HPITPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 374
Query: 592 IGYEIIKCI 600
+ EIIK +
Sbjct: 375 VAREIIKML 383
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF GCGGL G QAG ++ +++ ++ N + I D +
Sbjct: 1 MNLIDLFCGCGGLSYGFEQAGF-NVLLGIDNDKAALETFKLNHKNSKTICGDIREITFDE 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ +K ++DLIV GPPCQG S L+ R+ E + N L +F+ Q
Sbjct: 60 INNVIGNK--------KIDLIVGGPPCQGMS-LSGPRKFEDPR--NELYLSFIRLVKEIQ 108
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV GLV K +I I +M Y+V F+++ + +YGV QSR RV+ + +
Sbjct: 109 PKAFVIENVPGLVSLFKGKIKDSIIEKFSEMGYKVRFEIMCASDYGVPQSRKRVIFVGHQ 168
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCY 355
K FP+ ++ + +T A+SDLP + G
Sbjct: 169 D--KEFEFPEKMNTY-----------------------VTCEMALSDLPPLEDCLGNEES 203
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
++ P+ +Q++M+ S I L++HI S ++ I L+P +++D
Sbjct: 204 PYYKDPQNDYQQIMRQHSSI----------LRNHIAAKHSEQVKHIISLVPD--GGNYKD 251
Query: 416 LP 417
LP
Sbjct: 252 LP 253
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +RV TVRE AR Q FPD +VF G ++Q+GNAVPP +A+ +G +I + N
Sbjct: 286 FHYKYNRVPTVRESARLQSFPDDFVFLGNKTQQFRQVGNAVPPIMAQILGEKIKNLLKN 344
>gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
Length = 401
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 140/335 (41%), Gaps = 46/335 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLFSGCGGL EG QAG SVE++ A+ N E V+Q D + L
Sbjct: 3 KVLDLFSGCGGLGEGFLQAGF-DIAASVEIDEKACATQKFNHPETQVLQADLTQLAPRDL 61
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKS------KLKNGLVFTFLSF 232
T G++ DLI+ GPPCQGFS + K +N L F+ +
Sbjct: 62 SLAT---GIT-----NFDLIIGGPPCQGFSLIGTRLGTGKGFGEFGEDPRNKLYKEFVRY 113
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCL-------LKMNYQVTFDVLQSGNYGVA 285
FQPK ++ENV GL +K + + I L + Y V D++++ +GV
Sbjct: 114 VRYFQPKMFLMENVPGLFSMHKGAVRENIEQDFSFDDPEGLFVGYHVVSDIVKAVEFGVP 173
Query: 286 QSRNRVVILASKPGYK-LPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
QSR RV+ L + +P P+ + F + F TV+DAI D
Sbjct: 174 QSRERVIFLGVRKDLNIIPEHPRAV--FKEEDF------------------FTVQDAIGD 213
Query: 345 LPRVSQGANCYLFHNPPKT---HFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
LP++ + N P+ + + + + RI L +H + +
Sbjct: 214 LPKLDIRDGEFSVKNTPRNEAPYLKLLNTNAKRIKRDTGFEDGYLYNHTTRFQNERDREI 273
Query: 402 IRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY 436
R++ F N D I ++L G + KL Y
Sbjct: 274 FRILEPFQNLKTLDPDLIPIRLRNGFDDFYRKLDY 308
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 405 IPSFPNADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP 464
I P D RD PR + Y + L NAK+ K +
Sbjct: 211 IGDLPKLDIRDGEFSVKNTPRNEAPYLKLLNTNAKRIKRDTGFEDG-------------- 256
Query: 465 WSLVHTASRNNNWQGVLGRLAWDESF-DMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAW 523
+ HT N + R+ E F ++ +IP L N + +L +
Sbjct: 257 YLYNHTTRFQNERDREIFRIL--EPFQNLKTLDPDLIPIRL------RNGFDDFYRKLDY 308
Query: 524 DESFDTIVTTPNPLNKQG-KILHPE--QDRVLTVREYARAQGFPDSYVFRGGICDMYKQI 580
+ TI+ L+K G +HP+ Q R ++VRE AR Q FPD++VF G M+KQI
Sbjct: 309 KKPSPTIIAH---LHKDGLAFIHPDGNQARSISVREAARLQSFPDNFVFIGPQTAMFKQI 365
Query: 581 GNAVPPPLAKAIGYEIIKCIG--NAVP 605
GNAVPP LA +G I K + N +P
Sbjct: 366 GNAVPPLLAYHLGLHIKKTLDAINEIP 392
>gi|429099380|ref|ZP_19161486.1| DNA-cytosine methyltransferase [Cronobacter dublinensis 582]
gi|426285720|emb|CCJ87599.1| DNA-cytosine methyltransferase [Cronobacter dublinensis 582]
Length = 352
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKS 176
++ +D F GCGG +G AG ++ + S ASY ANF + + I+DD N+ ++
Sbjct: 1 MRVIDFFCGCGGASKGFELAGF-DIALGIDFDESAEASYKANFPQTNFIRDDIRNIKIRD 59
Query: 177 LLKGHTQHKGVSLPQKHEVDLIV-AGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ K +P++ L+ A PCQ FS N+ R ++ + L+ F
Sbjct: 60 VAK--------LVPERDSAQLVFCACAPCQPFSSQNKTRNVDDKR--RTLLGETKRFIRA 109
Query: 236 FQPKYIILENVTGL--VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
F+P +I +ENV G+ V +N H + + YQ F V+ S YGV Q R R+V+
Sbjct: 110 FRPAFIFIENVPGIQSVKIAENGPFADFLHFIGRFGYQYDFKVVSSEFYGVPQQRKRLVV 169
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
LA GY P FP P H + F TVRD I DLP + G
Sbjct: 170 LAKLGGY--PDFPAPTHGHEEKPFA------------------TVRDYIGDLPSLQAG 207
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQGFPDSYVF 569
N V GR+ WD T+ T ++ G+ HP+ Q+R +T RE A Q FP +++F
Sbjct: 254 NGHTDVYGRMRWDMPCKTLTTKCTSIS-NGRFGHPDITQNRAITFREAACLQTFPKNFIF 312
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G KQIGNAVP LA+ I+K
Sbjct: 313 EGSNISKSKQIGNAVPVLLAQCFAEAILK 341
>gi|406963796|gb|EKD89769.1| Modification methylase HgiDII [uncultured bacterium]
Length = 380
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 30/243 (12%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
++ PLK +DLFSGCGG G QAG +V++ + + S+ NF + V D + +
Sbjct: 1 MNKPLKVIDLFSGCGGSALGFKQAGFDIKV-AVDINKLASQSFKLNFPKAKVFSSDISTI 59
Query: 174 L-KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+ LLK G +EV +I+A PPCQGFS R E +N L++ FL
Sbjct: 60 SSEELLKAANASSG------NEV-VIIACPPCQGFSTARRKSEAINDP-RNTLIYEFLRV 111
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+P ++ENV GL + + Q I L ++ Y + V+ + +YGV Q R R+V
Sbjct: 112 VRDIRPFAFVMENVPGLANGIGKPLFQDILKKLKELGYDTVYGVVDTADYGVPQRRKRLV 171
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI----TVRDAISDLPRV 348
++ + +FP+ N+ P R + TVR+AI DLP++
Sbjct: 172 LIGTNDSKIRLTFPKQ----------------TNQDPDLPDRYLTPWNTVRNAIGDLPQI 215
Query: 349 SQG 351
+ G
Sbjct: 216 NAG 218
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
+ ++ + GR+ WD TI T + +G+ HPEQDR +++RE AR Q FPD Y F G
Sbjct: 266 SGYKDIYGRMKWDSPSPTI-TGGCVMISKGRFGHPEQDRAISLREAARLQTFPDDYKFAG 324
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ Q+GNAVPP LAK IG + I
Sbjct: 325 NTGHIAAQLGNAVPPLLAKRIGETLAASI 353
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1166
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 13/297 (4%)
Query: 68 DETIYTEYYRKTKDKHF-VQPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSG 126
DE I Y R +F V P L L+ + S P + + L+ LDLF G
Sbjct: 631 DENIPAPYNRAGVGGYFYVTHRVSPAGLCVPLRSVPSSLRQGFDPAVVISELRGLDLFCG 690
Query: 127 CGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKG 186
G GL + G + W+ + +Y AN +++ + + + +
Sbjct: 691 GGNFGRGLEEGGAVRMSWANDCNARAIHTYMANCSHPNLMSPFLGSIDDFQREAFSGNFS 750
Query: 187 VSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENV 246
S+P VD I G PC GFS L R ++ + LV F S DL++PKY +LENV
Sbjct: 751 KSVPTIGSVDFISGGSPCPGFSTLTNDRTTDEQRKNQSLVAAFASCVDLYRPKYGLLENV 810
Query: 247 TGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLP 303
G++ N ++L ++ + YQ L + + G AQ R+RV I + P YKLP
Sbjct: 811 PGILPSKANREQDVLGQFMCAIVGIGYQAQVFYLDASSCGSAQRRSRVFISFAAPNYKLP 870
Query: 304 SFPQPLHAF-SNQLFTINGNLVANKTSHA--------PYRSITVRDAISDLPRVSQG 351
PQ H+ + +T G L + A P+ R S LP++ G
Sbjct: 871 GKPQQTHSHPPDTRYTSLGKLPTRRHVLAERDFLRATPFSYSVARQVSSGLPKIHNG 927
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 464 PWSL-VHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLA 522
PW + + +ASR G+L + +T + T P + H R ++ GRL
Sbjct: 959 PWGMNLRSASR-----GIL--TPAERGVFVTINRKTSKPNTEPHKLDRQSS---AYGRLC 1008
Query: 523 WDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
++ I T P + K G+ LH ++R L+V E RAQGF D V G + YK +G
Sbjct: 1009 PNQLIGAITTIQVPNDRKHGRQLHWHENRGLSVMEARRAQGFLDDEVILGTPAEQYKIVG 1068
Query: 582 NAVPPPLAKAIGYEI 596
N+V +A A+G I
Sbjct: 1069 NSVAREVALALGLSI 1083
>gi|59802210|ref|YP_208922.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090]
gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
DGI18]
gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA6140]
gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
PID24-1]
gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|385336778|ref|YP_005890725.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae]
gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA 1090]
gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 333
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPRHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ + VDL++ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLTNCLNGQSVDLVIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-A 352
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 353 NCYLFHNPPKTHFQRMM------KDGSRIHDIHINLR 383
N ++ ++ H +M+ K+G +DI LR
Sbjct: 209 NPHVANHEAMNHSAQMLEKMAFVKNGGNRNDIPEPLR 245
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
K+ H EQ+R LTVRE A Q FPD+++F G +Q+GNAVPP LAKAI I+K
Sbjct: 272 KVFHYEQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSE 331
Query: 602 N 602
N
Sbjct: 332 N 332
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK +DLF+G GG+ EG +AG C + +++ ++ N + D V +
Sbjct: 2 LKTIDLFAGAGGITEGFRKAGYVCVCAN-DIDEEAKHTFTYNHPTVPFVLKDVREVTAAE 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L E+D+I GPPCQGFS A + +N L ++ +
Sbjct: 61 LLAAANCTAA------EIDVITGGPPCQGFSL---AGQRLSDDPRNTLFREYVRIAADIR 111
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ + ENV G+++ +L+ I K+ YQ ++++ + +YGV Q+R R V++ +
Sbjct: 112 PRVLFFENVHGIMNMQNGRVLKAIVTEFEKIGYQCKYNLVNAADYGVPQARPRFVLIGIR 171
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
K +FPQP H + + +G + K PY +TV DA S+LP V+QG
Sbjct: 172 GFDKKITFPQPTHGKNEE----SGQMNLFKRELLPY--VTVNDAFSNLPVVNQG 219
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK------QIGNAVPPPLAKA 591
N + ++HP +R LTVRE AR Q F D Y F G + K Q+GNAVPP LA A
Sbjct: 302 NFRTDLIHPVMNRGLTVREAARLQSFDDDYCFFGNLTRKAKWLTQDDQVGNAVPPLLAYA 361
Query: 592 IGYEI 596
I
Sbjct: 362 FAKHI 366
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K +DLF G GGL G +AG +V+ A +++ NF E DD N +
Sbjct: 1 MKVVDLFCGAGGLHLGFQEAGFEIKL-AVDSNPIVAKTHEFNFPEIPFFSDDINQL---- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR--ARELEKSKL---KNGLVFTFLSF 232
T + +L + E+D+++ GPPCQGFS + + + E+ +N L+ ++
Sbjct: 56 ----TGFELFNLIEGEEIDVLIGGPPCQGFSTIGKRVSSNFERRTAEDERNKLILEYIRI 111
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+ +PKY ++ENV GL+ +K + ++ ++ L K Y +L +YGV Q R RV
Sbjct: 112 LNQLKPKYFVIENVKGLLTMDKGDFIKGVYKELDKTGYDYKLKLLNMADYGVPQLRERVF 171
Query: 293 ILASKPGYKLPSFPQPLHA 311
I+ ++ G+++ +FP P H+
Sbjct: 172 IIGNRLGHEV-NFPLPTHS 189
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+HP +R LTVRE AR Q FPD +F+G Q+GNAVPP ++ + I K
Sbjct: 281 IHPILNRSLTVREAARIQTFPDWMIFKGNRRQQGHQVGNAVPPLFSRILAEHIKK 335
>gi|342732841|ref|YP_004771680.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342330296|dbj|BAK56938.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 375
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 61/374 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL +G QAG K ++ + + +Y N + +++D + +
Sbjct: 7 VIDLFSGAGGLSQGFVQAGY-KLLAGIDFDDAALQTYAHNIKGAKALKED---LFNEEVA 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
K +S +EVD+I+AGPPCQGFS L +R++ S +N L + F+PK
Sbjct: 63 IRNIEKAIS---NNEVDVIIAGPPCQGFS-LTGSRDINDS--RNKLYVAVVHAVQHFRPK 116
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF--DVLQSGNYGVAQSRNRVVILASK 297
++ENV G+ K + Q I + M Y VT L + +YGV Q R R+ + +
Sbjct: 117 AFMIENVPGMATLYKGAVKQQIINTFEDMGYAVTVTDSPLLAADYGVPQFRKRMFFVGYR 176
Query: 298 P--GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GAN 353
GY FP+PL L A I DAISDLP + G+
Sbjct: 177 KNLGYDYFKFPEPL-------------LDAE-------HYIGTADAISDLPSLVDELGSE 216
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ N P++ +Q++M+ S +++ +H+ + ++ I +P +
Sbjct: 217 IMDYINEPQSDYQKLMRIDS----------DVIFNHVGTNHTKEVKWVISQVPE--GGNH 264
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI-IPWSLVHTAS 472
+DLP + + ++T +Y++K+ D G +N W+ V T
Sbjct: 265 KDLPPGVGESRKFNEAWT---RYHSKRPSKTIDT---------GHRNHFHYKWNRVPTVR 312
Query: 473 RNNNWQGVLGRLAW 486
N Q R +
Sbjct: 313 ENARLQSFPDRFKF 326
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
H + +RV TVRE AR Q FPD + F G KQ+GNAVPP LA+A+G ++
Sbjct: 301 FHYKWNRVPTVRENARLQSFPDRFKFLGTKTQQNKQVGNAVPPLLAQAVGLKM 353
>gi|423064852|ref|ZP_17053642.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
gi|406714095|gb|EKD09263.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
Length = 395
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 113 PLDTPLKC---LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P+ PL+ +DLFSG GG+ +G QAG P SVE+ +A++ NF C D
Sbjct: 45 PVSQPLQTYNFIDLFSGAGGITQGFWQAGF-NPVASVEINPIASATHQRNFPNCHHFCGD 103
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N H+ +S V L+V GPPCQGFS A + + + +N L F
Sbjct: 104 VN--------DFNPHQWLSKIGSPSVHLVVGGPPCQGFS---VAGKRDPNDPRNHLFQQF 152
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSR 288
+ +P Y+++ENV G++ K +I Q IF + Y ++ +L+S YGV Q R
Sbjct: 153 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIR 212
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R + +A++ G + P +P P QL P T+ AISDLP
Sbjct: 213 PRAIFIANRFGMENP-YPNP------QL--------------VPEEYQTIESAISDLP 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 304 NHGGTHIHPHLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYGLI 363
Query: 598 KCIGNAV 604
+ V
Sbjct: 364 PYLNRIV 370
>gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris]
Length = 308
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 153/350 (43%), Gaps = 85/350 (24%)
Query: 265 LLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLV 324
L+ MNYQ ++ +G YG+ Q R RV + + KLP +P P H + I
Sbjct: 3 LVGMNYQARMGMMAAGAYGLPQFRMRVFMWGALSSEKLPQYPLPTHKVIVR-GVIPTEFE 61
Query: 325 ANKTSHAPYRSITVR------DAISDLPRV--SQGANCYLFHNPPKT---HFQRMMKDGS 373
+N + R I ++ DA+SDLP V ++ + + N P + HF R+ +DG+
Sbjct: 62 SNTVALDEGREIDLKKELFLGDALSDLPSVENNEQRDEMPYTNEPTSDFQHFIRLGRDGA 121
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK 433
L +L DH L+ R+ IP A++RDLP + V+ K
Sbjct: 122 --------LGSVLYDHRPLQLNDDDYQRVCQIPKREGANFRDLPGVRVR-------SDNK 166
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIP---WSLVHTASRNNNWQGVLGRLAWDESF 490
++++ D + + K ++P S V +S GRL WDE+
Sbjct: 167 VEWDP-------DVERVKLPSGK----PLVPDYAMSFVGGSSTKP-----FGRLWWDET- 209
Query: 491 DMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDR 550
+P T+VT P N+ I+HP+Q+R
Sbjct: 210 ---------VP---------------------------TVVTRAEPHNQ--TIIHPQQNR 231
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
VLT+RE AR QGFPD Y G I + Y Q+GNAV P+A+A+GY + +
Sbjct: 232 VLTIRENARLQGFPDYYKLTGPIKERYIQVGNAVAVPVARALGYSLAMAM 281
>gi|387879685|ref|YP_006309988.1| cytosine methyl transferase [Streptococcus parasanguinis FW213]
gi|386793137|gb|AFJ26172.1| cytosine methyl transferase [Streptococcus parasanguinis FW213]
Length = 354
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 187/488 (38%), Gaps = 155/488 (31%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF G GGL G+ QAG+ +++ +Y+ N ++ +LK +
Sbjct: 8 INAVDLFCGVGGLTCGIQQAGI-NVVAGYDIDSRSQFAYEFN--------NNAKFILKDV 58
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN-RARELEKSKLKNGLVFTFLSFCDLF 236
+ Q P ++ +++ PCQ FS + + + E + K L+ F +
Sbjct: 59 KEIDNQEISNLYPDDTDIKILMGCAPCQPFSTYSHKYKNNENTLQKMDLLAYFGQQIEYV 118
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QP + +ENV +V K ++ + H L+K NY + + ++ + +YGV Q R R+++LAS
Sbjct: 119 QPDIVSMENVPQMV---KEKVFEDFIHILMKNNYSIDYKLVYAPDYGVPQKRKRLLLLAS 175
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
K G ++ P NK ++ T+RD I +LP + G
Sbjct: 176 KIG-EIKLIPAQF----------------NKDNYP-----TLRDTIGNLPELKAG----- 208
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+L + L H + LS L RI+ S P W+D
Sbjct: 209 ----------------------DTDLNDPL--HRSRNLSELNMKRIK--QSKPGGTWKD- 241
Query: 417 PNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN 476
+ E+L A KKKS +
Sbjct: 242 -------------WDEELLLEAYKKKS------------------------------GES 258
Query: 477 WQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNP 536
++ V GRL WD+ NTI TT P
Sbjct: 259 FRSVYGRLEWDQP------SNTI--------------------------------TTQFP 280
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR----GG---ICDMYKQIGNAVPPPLA 589
G+ HPEQDR L++RE A Q FP Y+F GG I + QIGNAVPP L
Sbjct: 281 GIGNGRFGHPEQDRALSLREGAMLQTFPREYLFTDPNLGGNYPIAQVALQIGNAVPPKLG 340
Query: 590 KAIGYEII 597
+ IG I+
Sbjct: 341 EVIGQSIL 348
>gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession
Number M24625 [Neisseria meningitidis]
Length = 276
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TPL +DLFSG GGL G QAG + SVE+E +Y NF ++Q D +
Sbjct: 1 MHTPLTYIDLFSGAGGLSLGFEQAGFQQ-LLSVEMESDYCQTYRTNFPHHQLLQKDLTTL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
T+ ++ VDLI+ GPPCQGFS + +N L F+
Sbjct: 60 --------TEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNHLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP + ++ENV L N + I + Y V +L + ++GV Q R+RV+
Sbjct: 112 KIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + K+ SFP+PL + SH TV AI P+++ G +
Sbjct: 172 IGRRDKGKI-SFPEPL-----------------QISHQ-----TVGSAIGHFPKLAAGES 208
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHI 380
NP + + M + +H+
Sbjct: 209 -----NPHVANHEAMNHSAQMLEKMHL 230
>gi|376005611|ref|ZP_09783070.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375326009|emb|CCE18823.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 401
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 113 PLDTPLKC---LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P+ PL+ +DLFSG GG+ +G QAG P SVE+ +A++ NF C D
Sbjct: 51 PVSQPLQTYNFIDLFSGAGGITQGFWQAGF-NPVASVEINPIASATHQRNFPNCHHFCGD 109
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N H+ +S V L+V GPPCQGFS A + + + +N L F
Sbjct: 110 VN--------DFNPHQWLSKIGSPSVHLVVGGPPCQGFS---VAGKRDPNDPRNHLFQQF 158
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSR 288
+ +P Y+++ENV G++ K +I Q IF + Y ++ +L+S YGV Q R
Sbjct: 159 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIR 218
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R + +A++ G + P +P P QL P T+ AISDLP
Sbjct: 219 PRAIFIANRFGMENP-YPNP------QL--------------VPEEYQTIESAISDLP 255
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 310 NHGGTHIHPHLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYGLI 369
Query: 598 KCIGNAV 604
+ V
Sbjct: 370 PYLNRIV 376
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 34/258 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECS--VIQDDCNLVLK 175
L +DLF+G GGL GL +AG + ++++++ +A++ N + S I D V K
Sbjct: 6 LTYVDLFAGAGGLSTGLERAGF-ELIHAIDIDQDASATFANNREGWSPEEIIGDIREVDK 64
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
S + H V ++ VDL+ GPPCQGFS++ + S +N L F+ + D
Sbjct: 65 SEI-----HDTVG---RNSVDLVAGGPPCQGFSEVVSP---DGSDERNHLFVNFIDWVDE 113
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+P+ + ENV G+ + + + L + + Y VT V+ S ++GV Q R RVV+LA
Sbjct: 114 LEPQAALFENVRGIQNTAEGKFLDAVNDSFANIGYNVTHRVVTSSDFGVPQHRRRVVLLA 173
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
+K K QPL F +N P ++ V D I DLP V G
Sbjct: 174 TKDSLKH----QPLGGFE-----LN-----------PVKTPGVIDGIGDLPEVGPGEEIT 213
Query: 356 LFHNPPKTHFQRMMKDGS 373
+ P+T Q ++ S
Sbjct: 214 EYDQSPQTVLQNDLRGDS 231
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK--QGKILHPEQDRV 551
G T IP L ++ +N++ RL DE + T N ++K + +HP Q R
Sbjct: 256 GGNRTAIPDELQPSSGYHNSYS----RLKSDEP--AVAITRN-MSKPSSARCIHPFQHRG 308
Query: 552 LTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
LT RE AR Q FPDSY F GG+ KQIGNAVPP LA+A+GY + + +
Sbjct: 309 LTPREGARLQTFPDSYRFEGGLVSTRKQIGNAVPPYLAEALGYYLKQAV 357
>gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
Length = 486
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 148/344 (43%), Gaps = 65/344 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECS----------VIQD 168
+ LDLF+GCGGL G +AG + +VE++ A S+ NF + Q+
Sbjct: 14 RVLDLFAGCGGLSLGFQRAGF-EILAAVEMDPHAARSHAINFHPGDRFDLHAKPRDISQE 72
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRA------RELEKSKL- 221
+ VL L G + VD+I+ GPPCQ ++++ RA R E KL
Sbjct: 73 QPDQVLGELYPGERA--------EDLVDIIIGGPPCQAYARVGRAKLREIWRHPEGYKLD 124
Query: 222 -KNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSG 280
+ L +L + D +P +++ENV +++ + I Q + L NY + +L +
Sbjct: 125 PRGDLFLHYLYYVDRLKPVALVMENVPDALNYGGHNIAQEVADWLEDRNYVCRYTLLNAV 184
Query: 281 NYGVAQSRNRVVILASKPGYKL-PSFPQPLHAFSNQLFTINGNLVANKTSH--APYR--- 334
+YGV Q R R+ ++A + P FP P HAF+ N VA +T P R
Sbjct: 185 HYGVPQMRERMFLIAVAGELGVEPEFPVPTHAFTLPAGYKNARKVAMRTLGLLQPERLGS 244
Query: 335 -------------SITVRDAISDLP--------RVSQGANCYL----FHNPPKTHFQRMM 369
++T +AI DLP R+ +G + + PP + + R+M
Sbjct: 245 FVSPPTVDPALPPAVTAYEAIGDLPPITAHLENRIGRGPRRFTEQVPYAGPPHSDYARLM 304
Query: 370 KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS--FPNA 411
+ +H + DH+ + L + R+ P +P A
Sbjct: 305 RTWPGFEALHG-----ISDHVIRYLPRDYRIFARMRPGDQYPEA 343
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
Q R ++VRE AR Q FPD + F G + ++QIGNAVPP LA +G + + I A+
Sbjct: 422 QARTISVREAARLQSFPDGFRFAGTMNPAFRQIGNAVPPLLAWRVGAAVREAIETAL 478
>gi|409990392|ref|ZP_11273771.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409938741|gb|EKN80026.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
Length = 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 37/238 (15%)
Query: 113 PLDTPLKC---LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P+ PL+ +DLFSG GG+ +G QAG P SVE+ +A++ NF C D
Sbjct: 68 PVSQPLQTYNFIDLFSGVGGITQGFWQAGF-NPVASVEINPIASATHQRNFPNCHHFCGD 126
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N H+ +S V L+V GPPCQGFS A + + + +N L F
Sbjct: 127 VN--------DFNPHQWLSKIGSPSVHLVVGGPPCQGFSV---AGKRDPNDPRNHLFQEF 175
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSR 288
+ +P Y+++ENV G++ K I Q IF + Y ++ +L+S YGV Q R
Sbjct: 176 IRIVAEVRPWYVVMENVPGILTLKKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIR 235
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R + +A++ G K P +P P QL P T+ AISDLP
Sbjct: 236 PRAIFIANRFGMKNP-YPYP------QL--------------VPEEYQTIESAISDLP 272
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 327 NHGGTHIHPHLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYGLI 386
Query: 598 KCIGNAV 604
+ V
Sbjct: 387 PYLNRIV 393
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 48/308 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSE----AASYDANFQECSVIQDDCNL--V 173
LDLFSG GGL EG A + + + + +Y N + D + +
Sbjct: 7 VLDLFSGPGGLSEGFNTAKIGNHTFRSVVANDNDVHASVTYRKNHPGVEFVLGDISASEI 66
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+ +++ G+ + VD+I+ GPPC+GFS N+ K+ + N LV +++
Sbjct: 67 KRKIVRAIKAETGM-----NTVDVIIGGPPCKGFSLTNKMTRNMKNPM-NRLVMDYVAMI 120
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD-VLQSGNYGVAQSRNRVV 292
+PK ++ENV G+ +I++ + M Y T +L + +YGV Q R R
Sbjct: 121 RKLKPKAFVMENVPGIFAMEGGKIVKDLISEFRSMGYYNTDSWLLNAADYGVPQIRKRAF 180
Query: 293 ILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
I+ S+ ++P P+ H + Q AP ++V DAISDLP++ G
Sbjct: 181 IVGSRS--RIPIEKPRTTHGSNGQ---------------AP--RVSVFDAISDLPKIPDG 221
Query: 352 ANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
++ + PP FQR +++G R H+ + S L+ RIR +PS
Sbjct: 222 SSSSRAAYKKPP-NKFQRQLRNGQRKPTQHVTTKN----------SDLVLKRIRKVPS-- 268
Query: 410 NADWRDLP 417
+W+D+P
Sbjct: 269 GGNWKDIP 276
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 539 KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
++G I+HP + R+ +VRE AR Q FPDSY F GG+ M +Q+ +AVP LAK + I+
Sbjct: 313 RKGMIIHPTEHRLFSVREAARIQTFPDSYKFEGGLSSMQQQVSDAVPVFLAKKVAEAIL 371
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 46/293 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL--VLK 175
K LDLFSG GG +G + + ++ NF +I D V +
Sbjct: 3 FKILDLFSGAGGFSKGFEMIPGFTTVVASDFNEPALMTFHKNFPLSKIIFGDITSEKVKQ 62
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+++K + K V++I+ GPPCQGFS N+ ++L +N L +L +
Sbjct: 63 AIVKNAVETK---------VNMIIGGPPCQGFS--NKGKKLGLDDPRNFLFLEYLEMVNR 111
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
QP+ ++ENV ++ ++ I + + Y+V + +L + NYGV Q+R R +I+A
Sbjct: 112 LQPEVFVIENVKAMLTAVNGYFIKEIVDRINALGYKVNYSILSASNYGVPQNRQRAIIIA 171
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
+K K P P +N+ TVRDAISDL ++ G
Sbjct: 172 AKD--KKIKMPVPTVGINNK--------------------TTVRDAISDLSYLNSGEGEM 209
Query: 356 L--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
+ + P ++++Q MM+ N +L +HI S + ++ +IP
Sbjct: 210 ISQYRKPSESNYQTMMR---------ANSGNILYNHIATSHSQIALDKLAMIP 253
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 511 NNNWQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
N ++ GRL WD+ + DT TP+ GK HP +R +T RE AR Q FPD +
Sbjct: 268 NQKFKTTWGRLEWDKQAPTIDTRFDTPS----NGKNSHPYLNRAITPREAARIQSFPDDF 323
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
F G + KQIGNAVPP + KAI I
Sbjct: 324 EFIGKKSHITKQIGNAVPPLMGKAIAETI 352
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 51/305 (16%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV-L 174
T + +DLFSG GGL G +AG ++VE S A Y+ NF +I +D N V +
Sbjct: 2 TSFETVDLFSGVGGLSYGFEKAGFISK-YAVEFNSSIAKGYEENFPHSKIINEDINTVNI 60
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
KS+ K +I+ GPPCQGFSQ + + + + +N L ++ +
Sbjct: 61 KSVFGNLNGDK----------TIIIGGPPCQGFSQ--KGKRIGLNDERNFLFLKYIECVE 108
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ P ++ENV GL+ L I L + Y + VL + +YGV Q+R R I+
Sbjct: 109 VINPIAFVIENVPGLLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDYGVPQNRKRAFIV 168
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP--RVSQGA 352
+ ++P + +T+ DAISDLP + +G+
Sbjct: 169 GLRTENATFTWPTEFG-----------------------KKVTINDAISDLPILKSGEGS 205
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ P + +Q M+ + ++L +H+ SPL+ R++LIP +
Sbjct: 206 KSAGYRTAPVSDYQVKMRG---------TVSKVL-NHVSTKHSPLVLERLKLIPE--DGG 253
Query: 413 WRDLP 417
DLP
Sbjct: 254 RTDLP 258
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%)
Query: 531 VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAK 590
+TT G P QDR LTVRE AR Q FPDS+ F GG Q+GNAVPP LA+
Sbjct: 283 ITTRFDTPSSGMFTLPRQDRCLTVREAARIQSFPDSFRFPGGKSTQMLQVGNAVPPLLAE 342
Query: 591 AIGYEIIKCI 600
A+G +++K +
Sbjct: 343 AVGKQLMKSL 352
>gi|327308782|ref|XP_003239082.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
gi|326459338|gb|EGD84791.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
Length = 1079
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+LFSG G GL + G + W+VE + +Y AN + ++ C V L
Sbjct: 626 LKALNLFSGGGTFDRGLEEGGAVESKWAVEWGVQQMLTYRANHPDGKGLKLFCGSVNDYL 685
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L+ T + + + + + I AG PCQG+S N ++ E S + ++ + S+ DL++
Sbjct: 686 LQAITGKENIYVAKIGDAHFISAGSPCQGYSSANAYKDNEVSMRNSSMIASVASYIDLYR 745
Query: 238 PKYIILENVTGLVHF----NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P+Y ILENVTG+ N L C F + M YQ L + ++G QSR+R+ I
Sbjct: 746 PQYAILENVTGMASRTHVQNPLSQLLCTF---VGMGYQARVFNLDAWSFGAPQSRSRLFI 802
Query: 294 LASKPGYKLPSFPQPLHAF-----SNQLF-TINGNLVANKTSHAP-YRSITVRDAISDLP 346
+ PG + P H+ S L NG+ + P + ++ A DLP
Sbjct: 803 AITAPGLHVLEHPALTHSHPPGTKSRALGDNPNGSTFGERRWDTPVFEFVSAHSATQDLP 862
Query: 347 RV 348
+
Sbjct: 863 SI 864
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQG 562
L H+A R+ ++ F T+ T P G LH ++DR++TV+E RAQG
Sbjct: 915 LEHSARMKAATSKAWSRIHPEKLFPTVTTGVCPFCIFTGSWLHWQEDRLVTVQEVRRAQG 974
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
+PD+ V G +K +GN+V +A A+G + + CI N
Sbjct: 975 YPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREACIRN 1015
>gi|385266921|ref|ZP_10045008.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
gi|385151417|gb|EIF15354.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
Length = 377
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 37/286 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LDLF GCGGL +G AG V+ E + ++ N + V+ L L
Sbjct: 6 LNVLDLFCGCGGLSQGFLDAGY-NVMLGVDFEEAALKTFKYNHETSDVL-------LADL 57
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K + +VD+++ GPPCQGFS L +R++ ++ N L + F+
Sbjct: 58 SKDEAIEEIADKIGDQKVDIVIGGPPCQGFS-LTGSRDINDTR--NTLYLAVVKAVRRFK 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDV--LQSGNYGVAQSRNRVVILA 295
PK ++ENV G+ + Q I + M Y V+ L + +YGV Q R R+ +
Sbjct: 115 PKAFLIENVPGIATLYNGIVKQQIINTFEDMGYNVSVSPKPLLAADYGVPQMRKRMFFVG 174
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GAN 353
+ GY FP+P +H P R +T +AISDLP + G
Sbjct: 175 IEKGYGSFEFPEP--------------------THTPERYVTCSEAISDLPSRDEEFGEE 214
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+ P++ +Q M+ S+ +H ++ +H+ ++S + E
Sbjct: 215 VDNYEKKPQSLYQEFMRQNSK--KLHNHVATNHTEHVKWVISQVPE 258
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
H + +RV TVRE AR Q F D +VF G +Q+GNAVPP L+ + I++
Sbjct: 299 FHYKYNRVPTVRENARLQSFRDDFVFIGTRTQQNRQVGNAVPPLLSLNLAKAILR 353
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 52/301 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECS-VIQDDCNLVLKSLL 178
+DLFSG GGL G + G + + E + S A +Y N + V+ D +L L ++
Sbjct: 5 VIDLFSGVGGLSLGFEEEGFS-VLLANEYDESIANAYMKNHKTTKMVVGDITSLDLDAVF 63
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K+++D+I+ GPPCQGFSQ + + + + N L ++ +L +P
Sbjct: 64 GTY----------KNKIDVIIGGPPCQGFSQKGQRKTIYDKR--NFLFEYYVKVVELVKP 111
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
KY ++ENV L+ K I M Y + VL + ++GV Q+R R VI+
Sbjct: 112 KYFVMENVPNLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGKMN 171
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
G PS P L+ +T+ DAISDL + +G
Sbjct: 172 GVA-PSLPSSLN-----------------------EKVTIWDAISDLAFLESGEGDEVQE 207
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ P++ +++ ++ H N LL +H SPL R+R+IP PNA L
Sbjct: 208 YRYAPQSEYEKKLRG-------HAN---LLYNHKATKHSPLSLKRLRMIP--PNAGKEVL 255
Query: 417 P 417
P
Sbjct: 256 P 256
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 514 WQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G R+ D+ TI T TP+ GK HP +R +TVRE AR Q FPD ++F
Sbjct: 265 YSGTWTRMKKDDISVTITTRFDTPS----SGKFTHPFLNRAITVREAARIQSFPDEFIFI 320
Query: 571 GGICDMYKQIGNAVPPPLAKAIG 593
G +Q+GNAVPP LA AI
Sbjct: 321 GSKSSQMRQVGNAVPPLLASAIA 343
>gi|428771328|ref|YP_007163118.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685607|gb|AFZ55074.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 423
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSGCGG+ GL +G +VE + A + NF I D N + LK
Sbjct: 6 AIDLFSGCGGMSLGLEASGF-DVIVAVEFDAIHALIHHLNFPYTHTICQDINHLKTDYLK 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G Q+KG+ EVDLI GPPCQGFS + + R+L+ + N LVF ++ QPK
Sbjct: 65 GILQNKGID-----EVDLIAGGPPCQGFSLMGK-RQLDDPR--NSLVFEYVRVIRDLQPK 116
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ N + L+ + + + Y + +L + +G Q R R++++ S+
Sbjct: 117 YFIFENVPGIAVGNHKQFLEELINEFESLGYHIAKPIQILDASLFGAPQKRKRLILMGSR 176
Query: 298 PGYKLPSFPQPLHAFSNQLFTIN 320
+ ++P +++ TIN
Sbjct: 177 HDMQPVNYPLETGEYNDVENTIN 199
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+H Q R +TVRE R FPD ++F I +++IGNAV P LAKAIG EIIK +
Sbjct: 307 IHYNQPRCITVREAGRLHTFPDWFLFHETIWHGFREIGNAVIPMLAKAIGDEIIKVL 363
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 37/270 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG GGL+ L +AG + S E+ S ++ NF E + Q D
Sbjct: 2 LTAVDLFSGAGGLLLALKEAGY-QTLLSCEINESACETHKYNFPEIPLFQGD-------- 52
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELE------KSKLKNGLVFTFLS 231
++ T+ K + + +VDL+V GPPCQG+S + R + + +N LV+ ++
Sbjct: 53 IQNLTEDKIIEYTKGTDVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYIR 112
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNR 290
+ +PKY +ENV G + + + L+ + ++ Y + +V+ + ++GV Q R R
Sbjct: 113 VVKILRPKYFFMENVKGFLSLDNGQFLKTVIQEFEELGYDNIKCEVVCAADFGVPQQRYR 172
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL----P 346
+ ++ ++ G K +FP P H + LF + TV DAI DL P
Sbjct: 173 MFMIGNRVG-KPVNFPSPSHYPEDSLFLP--------------KYTTVGDAIMDLELLGP 217
Query: 347 RVSQGANCYLFHNPPKTHFQRMMKDGSRIH 376
VS + L+H +K+G +++
Sbjct: 218 EVSN--HVPLYHKSVVAERMSYVKEGDKLN 245
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP----PLAKAIGYEII 597
+HP +R LTVRE AR Q FPD +VF G + Q GNAVPP P K I ++I+
Sbjct: 294 IHPTLNRTLTVREAARIQSFPDHHVFTGTRQEQCIQAGNAVPPKMALPFFKQILHDIV 351
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 24/254 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN-----FQECSVIQDDCNL 172
L+ DLF G G GL + GV + W+ +L +Y AN + I D L
Sbjct: 616 LRGFDLFCGGGNFGRGLEEGGVIEMNWANDLNVKAIHTYMANTANTVYPFAGSIDDLQTL 675
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
L+ +P VD + G PC GFS+L + + + LV F SF
Sbjct: 676 ALQGKFSK-------KVPPVGSVDFVSGGSPCPGFSRLTNDKATPEQRKNQSLVAAFASF 728
Query: 233 CDLFQPKYIILENVTGLVH--FNKNE-ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
D+++PK+ +LENV +V +NE + + ++ + YQ F ++ S YG QSR+
Sbjct: 729 IDVYRPKFGLLENVMDIVQTKTKRNEDVFSQLICAIVGLGYQTHFFIMDSWAYGSPQSRS 788
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQ-------LFTINGN-LVANKTSHAPYRSITVRDA 341
RV + + PG KLP P H+ + NG +V P++ +++ +A
Sbjct: 789 RVFLCFAAPGLKLPEVPIQSHSHYESGKRRKTLGWLPNGEPMVERLEIPTPFKFVSIAEA 848
Query: 342 ISDLPRVSQG-ANC 354
+DLP + G A+C
Sbjct: 849 TADLPDIMDGKADC 862
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 522 AWDESF-----DTIVTTPNPLNKQ-GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
AW +F T+ TTP+P + + G+++H Q+RVL+V E RAQGF D V G +
Sbjct: 928 AWGRAFPNSVMQTVTTTPSPTDARIGRVMHWNQNRVLSVMEVRRAQGFLDHEVILGTPKE 987
Query: 576 MYKQIGNAVPPPLAKAIG 593
+K +GN+V ++ A+G
Sbjct: 988 QWKVVGNSVAREVSLALG 1005
>gi|444912168|ref|ZP_21232333.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
gi|444717076|gb|ELW57911.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
Length = 522
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 13/226 (5%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ LDLFSGCGGL G AG VE++R A SY NF D+ + KS++
Sbjct: 32 RMLDLFSGCGGLTLGFVSAGCTS-VGGVEIDRDAARSYAWNFHPVHGQPDEYHAYPKSVV 90
Query: 179 KGHTQ---HKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLKNGLVF 227
+ H + K +DLIV GPPC F+++ RA+ E K + L
Sbjct: 91 DHGPRELLHDLEARSSKKGIDLIVGGPPCPAFTRVGRAKLREVYNHPEAFKHDERATLYI 150
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
+L + +P +++ENV ++++ + + I L ++ Y+ + +L + NYGV Q
Sbjct: 151 EYLKYVRELKPVALVMENVPDILNWGGHNVGDEICKSLDELGYRCAYTLLNAANYGVPQM 210
Query: 288 RNRVVILA-SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAP 332
R R ++A K P+FP P + L ++ VA K H+P
Sbjct: 211 RERFFLVAIHKQAGIEPAFPTPTRRYEFPLGYLSSRKVALKKVHSP 256
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
Q RV++VRE AR Q FPD + F G + ++QIGN+VPP L+ AI +++
Sbjct: 444 QARVISVREAARLQSFPDGFRFSGAMNTAFRQIGNSVPPLLSWAIADQLL 493
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1210
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 45/272 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAA--SYDANFQECSVIQDDCNLVLK 175
++ L+LF G G + L + G+A ++ ++ S A + NF ++I D N VL
Sbjct: 525 IRHLELFGGIGSMSVALIELGLASQDETMFIDFSIPACQTLSTNFPRSTIICADVNEVLA 584
Query: 176 SLLKGHT---------QHKGV-----SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
++ G T Q G LP+ + DLI AG PC S LN R+ SK
Sbjct: 585 LMINGKTESGQDFLVDQRTGKVIRVNELPRPGDFDLITAGFPCGSHSTLNVLRKANDSK- 643
Query: 222 KNGLVFTFLSFCDLFQPKYIILENV-------TGLVHFNKNEILQCIF-----HCLLKMN 269
N L T LSF +P Y+ ENV T ++ + +L F L+ +
Sbjct: 644 -NALCATALSFIAYLKPDYLFFENVWCAGLLKTSFINPGNDSVLNKAFLRIINGALISLG 702
Query: 270 YQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---------- 319
YQV F VLQ+ +G Q+R R++ ++ G P+P H + ++ I
Sbjct: 703 YQVQFGVLQAAQFGSPQARRRIIFAGTRHGLTAIKLPEPTHHYPDEGLAILLPTNDEKSD 762
Query: 320 -NGNLVA----NKTSHAPYRSITVRDAISDLP 346
NG+ + K S ++ITV DAISDLP
Sbjct: 763 HNGHRLVRADYRKCSSGALKAITVHDAISDLP 794
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 505 VHTASRNNNWQGVLGRLAWDESFDTIVTT--PNPLNKQGKILHPEQDRVLTVREYARAQG 562
++T +++ G GRL + F+TI+T P+ NK G +LHP Q R L++ E RAQG
Sbjct: 964 LNTCRNPHDFDGNYGRLGFQGQFNTIITKMHPHNQNKCGAVLHPNQYRTLSLLEAQRAQG 1023
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPL 608
FPD + A + + + ++ K IGN++P P+
Sbjct: 1024 FPDRFKLEPA----------ATKGKMDETVNQQLFKLIGNSIPIPI 1059
>gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis]
Length = 321
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 37/238 (15%)
Query: 113 PLDTPLKC---LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P+ PL+ +DLFSG GG+ +G QAG P SVE+ +A++ NF C D
Sbjct: 68 PVSQPLQTYNFIDLFSGVGGITQGFWQAGF-NPVASVEINPIASATHQRNFPNCHHFCGD 126
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N H+ +S V L+V GPPCQGFS A + + + +N L F
Sbjct: 127 VN--------DFNPHQWLSKIGSPSVHLVVGGPPCQGFS---VAGKRDPNDPRNHLFQEF 175
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSR 288
+ +P Y+++ENV G++ K I Q IF + Y ++ +L+S YGV Q R
Sbjct: 176 IRIVAEVRPWYVVMENVPGILTLKKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIR 235
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R + +A++ G K P +P P QL P T+ AISDLP
Sbjct: 236 PRAIFIANRFGMKNP-YPYP------QL--------------VPEEYQTIESAISDLP 272
>gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 387
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 36/228 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GG+ +G QAG+ KP S+E+ +A+Y NF +C C + + L
Sbjct: 73 VDLFAGAGGITQGFVQAGL-KPIASLEINPIASATYVKNFPQC---HHFCGDIAEFLPIN 128
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
G E+ L+V GPPCQGFS A + + +N L + F+ +P Y
Sbjct: 129 WLNQIGSP-----EIHLVVGGPPCQGFSV---AGQRNPNDPRNFLFYEFIRVVSEIRPWY 180
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQ-VTFDVLQSGNYGVAQSRNRVVILASKPG 299
I++ENV G++ NK + + IF + Y+ ++ +L+S YGV Q R R + +A++
Sbjct: 181 IVMENVPGILTMNKGAVKEAIFEEFKAIGYEAISVAILESAAYGVPQIRPRAIFIANR-- 238
Query: 300 YKLPS-FPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
K+P+ +P+P QL P + +++ AISDLP
Sbjct: 239 LKMPNPYPEP------QLL--------------PEQYLSIESAISDLP 266
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA
Sbjct: 321 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLA-------- 372
Query: 598 KCIGNAVPPPLAK 610
+CIG A+ P L K
Sbjct: 373 ECIGKALIPYLNK 385
>gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 315
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 111/238 (46%), Gaps = 37/238 (15%)
Query: 113 PLDTPLKC---LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P+ PL+ +DLFSG GG+ +G QAG P SVE+ +A++ NF C D
Sbjct: 51 PVSQPLQTYNFIDLFSGAGGITQGFWQAGF-NPVASVEINPIASATHQRNFPNCHHFCGD 109
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N H+ +S V L+V GPPCQGFS A + + + +N L F
Sbjct: 110 VN--------DFNPHQWLSKIGSPSVHLVVGGPPCQGFS---VAGKRDPNDPRNHLFQQF 158
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSR 288
+ +P Y+++ENV G++ K +I Q IF + Y ++ +L S YGV Q R
Sbjct: 159 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILASAAYGVPQIR 218
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R + +A++ G + P +P P QL P T+ AISDLP
Sbjct: 219 PRAIFIANRFGMENP-YPNP------QL--------------VPEEYQTIESAISDLP 255
>gi|302497567|ref|XP_003010784.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
gi|291174327|gb|EFE30144.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
Length = 1085
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L L+LFSG G GL + G + W+VE + +Y AN ++ C V L
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGAIESKWAVEWGLHQMLTYRANHPNGKGLKLFCGSVNDYL 691
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T + + + + E I AG PCQG+S N +E E S + ++ + S+ DL++
Sbjct: 692 FQAITGKENIYVARIGEAHFISAGSPCQGYSSANAHKENETSMRNSSMIASVASYIDLYR 751
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENV G+ ++ L + + M YQ L + ++G QSR+R+ I +
Sbjct: 752 PQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQARVFNLDAWSFGAPQSRSRLFIAIA 811
Query: 297 KPGYKLPSFPQPLHAF-----SNQLF-TINGNLVANKTSHAP-YRSITVRDAISDLPRV 348
PG + P H+ S L NG+ + P + ++ R A DLP +
Sbjct: 812 APGLHILEHPALTHSHPPGTKSRALGDNPNGSTFGERRWDTPVFEFVSARSATQDLPPI 870
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQG 562
L H+A R+ ++ F + T P G+ LH ++DR++TV+E RAQG
Sbjct: 921 LEHSARMKAATSKAWSRIYPEKPFPAVTTGVCPFCIFTGRWLHWQEDRLVTVQEVRRAQG 980
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
+PD+ V G +K +GN+V +A A+G + + CI N
Sbjct: 981 YPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREACIRN 1021
>gi|427727460|ref|YP_007073697.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427363379|gb|AFY46100.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 428
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE++ A+++ NF C+V+ C V
Sbjct: 19 AVDLFAGAGGMTLGFEQAGF-DVLAAVEIDPIHCATHEFNFPFCTVL---CQSV------ 68
Query: 180 GHTQHKGVSLPQK---HEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
HT + L K E+D ++ G PCQGFS + + R + + N LVF F
Sbjct: 69 EHTTGTEIRLRSKIGDREIDAVICGSPCQGFSLMGK-RVFDDPR--NSLVFHFHRLVLEL 125
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVIL 294
QPK+ ++ENV G+ +ILQ + + YQV + +L + YGV Q+R R+ +L
Sbjct: 126 QPKFFVMENVRGITVGEHKQILQTLIAEFKAIGYQVEENYKILNAAKYGVPQARERLFLL 185
Query: 295 ASKPGYKLPSFPQPL 309
++ KLP +PQP+
Sbjct: 186 GARQDVKLPKYPQPI 200
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 467 LVHTASRNNNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDES 526
++ ++ R + Q + R A + G++ I + +H A N + A +
Sbjct: 278 ILSSSLRTKHSQPTIERFAAT----IPGEREPISRFHKLHPAGVCNTLR------AGTDK 327
Query: 527 FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
+ T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP
Sbjct: 328 YKGSFTSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPP 380
Query: 587 PLAKAIGYEIIKCIGNAVPPPLAKAIGYEI 616
LAK + EII+ + P+ +I YE+
Sbjct: 381 LLAKVVAAEIIRNLNIL---PVKPSISYEL 407
>gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+]
gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+]
Length = 1287
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 17/248 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ +DLF G G L GL G + W+ + +Y AN + ++ + +L
Sbjct: 807 LRGMDLFCGSGNLGRGLEDGGAIEMRWAADTWDKAIHTYMANAPDQDIVHPFYGSVDDLL 866
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ +V++I AG PC GFS L ++ K +V +F +F D
Sbjct: 867 RLALEGKFSD---NVPRPGDVEVISAGSPCPGFSLLTIDKKDLKQTKNQSMVASFAAFID 923
Query: 235 LFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV +V ++N + L +F ++ + YQ + +G QSRNRV
Sbjct: 924 FYRPKYAVLENVASIVQAHQNRSQDTLSQLFCAVIGLGYQAQLVNGDAWTHGAPQSRNRV 983
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSH--------APYRSITVRDAIS 343
+L + P +LP P P H+ + N ++ P++ + +A +
Sbjct: 984 FLLIATPDVRLPEAPAPSHSHYPGTKQRGIGKLCNGEAYVRRFLDIPTPFKYTSSSEATA 1043
Query: 344 DLPRVSQG 351
DLP + G
Sbjct: 1044 DLPDIIDG 1051
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 508 ASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDS 566
AS W RL + +F TI T +P + + LH + R T+ E RAQGF +
Sbjct: 1119 ASTAQGWS----RLTPNLAFPTITTALDPRDARTANGLHWRESRPFTLAEARRAQGFSEE 1174
Query: 567 YVFRGGICDMYKQIGNAVPPPLAKAIGYEI----IKCIGN 602
V G D +K +GN+V +A A+G + C+G+
Sbjct: 1175 EVLLGRQSDKWKLVGNSVSRHMAVALGLKFREAWTGCLGD 1214
>gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae]
Length = 424
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +V+++ A++ NF +C+ + V +S L+
Sbjct: 7 IDLFAGAGGLSLGFEQAGF-DLVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTRSELR- 64
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ G+ K ++D+++ G PCQGFS + + R L+ S+ N LV ++ +PKY
Sbjct: 65 --RIAGIG---KRDIDIVIGGAPCQGFSLIGK-RALDDSR--NQLVHHYVRVVMELKPKY 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L+ + Y V D VL + +YGV Q R R++++ ++
Sbjct: 117 FVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGVPQDRRRLILMGARK 176
Query: 299 GYKLPSFPQP 308
G LP++P+P
Sbjct: 177 GLPLPAYPEP 186
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR +PD + F ++QIGN+VPP LA+A
Sbjct: 303 TSPRPI-------HPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARA 355
Query: 592 IGYEIIKCI 600
+G +I+K +
Sbjct: 356 VGGQIMKAL 364
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF GCGG+ EG AG ++ ++ NF++ V D S +
Sbjct: 7 KVLDLFCGCGGISEGYALAGF-DIAGGIDFNEYATITFQHNFKKAKVHNIDITTFPDSQI 65
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR-ARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + +VD+IV GPPCQGFS NR +E+E + N L F ++ F
Sbjct: 66 E----------EEYGDVDVIVGGPPCQGFSSANRWQKEMEDPR--NKLFFEYIRFVQKIH 113
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK I++ENV GL+ + ++ I L Y +T+ VL + YGV Q+R R +I+ +
Sbjct: 114 PKVIMIENVRGLLTRDNGYAIERIKEILGAEEYNITYQVLDASEYGVPQNRKRAIIVGVR 173
Query: 298 PGYKLPSF 305
YK F
Sbjct: 174 KDYKDIKF 181
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 129/302 (42%), Gaps = 48/302 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLF G GGL G QAG V+ +Y N + ++ C +
Sbjct: 1 MNILDLFCGAGGLSYGFEQAGF-NAVLGVDFNEKALDTYQKNHKNSQIL---CGDLTSCE 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LK V + + + V ++ GPPCQGFS + ++L + +N L +L
Sbjct: 57 LKDEI----VKIAKTNNVRAVLGGPPCQGFSL--KGKKLGMNDSRNFLFQEYLEIVRQVN 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P +I++ENV L + L I L M Y V + VL + +YGV QSR R+ I+A+K
Sbjct: 111 PDFIVMENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATK 170
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL- 356
NQ F + + A +TV AISDL + G +L
Sbjct: 171 ----------------NQPFDFD--------AIAKQPKVTVEQAISDLNFLESGEGDFLQ 206
Query: 357 -FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ N P++H+Q+ M+ S LL +H S + ++ +IP P D
Sbjct: 207 TYPNKPQSHYQQQMRQNS----------SLLYNHQATNHSSVALQKLAMIP--PEGDKTS 254
Query: 416 LP 417
LP
Sbjct: 255 LP 256
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 498 TIIPWSLVHTASRNNNWQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T +P L + W GRL W + DT TP+ G HP R +T
Sbjct: 253 TSLPAHLKGRQKFDTTW----GRLKWQSVSPTIDTRFDTPS----NGCNSHPTLHRAITP 304
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
RE AR Q FPD +VF G ++ KQIGNAVPP LA I I
Sbjct: 305 REAARLQSFPDDFVFYGKKTEICKQIGNAVPPRLAHQIALAI 346
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 129/302 (42%), Gaps = 48/302 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLF G GGL G QAG V+ +Y N + ++ C +
Sbjct: 1 MNILDLFCGAGGLSYGFEQAGF-NAVLGVDFNEKALDTYQKNHKNSQIL---CGDLTSCE 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LK V + + + V ++ GPPCQGFS + ++L + +N L +L
Sbjct: 57 LKDEI----VKIAKTNNVRAVLGGPPCQGFSL--KGKKLGMNDSRNFLFQEYLEIVRQVN 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P +I++ENV L + L I L M Y V + VL + +YGV QSR R+ I+A+K
Sbjct: 111 PDFIVMENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATK 170
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL- 356
NQ F + + A +TV AISDL + G +L
Sbjct: 171 ----------------NQPFDFD--------AIAKQPKVTVEQAISDLNFLESGEGDFLQ 206
Query: 357 -FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ N P++H+Q+ M+ S LL +H S + ++ +IP P D
Sbjct: 207 TYPNKPQSHYQQQMRQNS----------SLLYNHQATNHSSVALQKLAMIP--PEGDKTS 254
Query: 416 LP 417
LP
Sbjct: 255 LP 256
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 498 TIIPWSLVHTASRNNNWQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
T +P L + W GRL W + DT TP+ G HP R +T
Sbjct: 253 TSLPAHLKGRQKFDTTW----GRLKWQSVSPTIDTRFDTPS----NGCNSHPTLHRAITP 304
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
RE AR Q F D +VF G ++ KQIGNAVPP LA I I
Sbjct: 305 REAARLQSFSDDFVFYGKKTEICKQIGNAVPPRLAHQIALAI 346
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 21/251 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L L LF G G GL + G + ++V++ SY AN ++ S N L
Sbjct: 614 LTGLGLFCGGGTFDRGLEEGGAVQFRYAVDIAEEALHSYRANTADPEQTSYYLGSVNEYL 673
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
S L G + + + + +I AG PCQGFS L + ++ ++SK +V + +S+ D
Sbjct: 674 ASALAGESSD---IVAEPGSIHVISAGSPCQGFSNLQQYKDSDRSKRNASMVASVISYVD 730
Query: 235 LFQPKYIILENVTGLV-----HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
L+ P+Y+ILENV + H +N Q I L+ + YQV ++ + YG +Q+R+
Sbjct: 731 LYAPRYLILENVIAMTTSIKEHGGQNVFSQMI-AALVGLGYQVQQFLMDAYYYGSSQARS 789
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTI-------NGNLVANKTSHA--PYRSITVRD 340
RV ILAS P ++ HA +L + NG ++ A P+ ++ +
Sbjct: 790 RVFILASAPICEVLEQQDYTHARPTELERMLHLGKCSNGKPFGSRQEEAYFPFAQVSAEE 849
Query: 341 AISDLPRVSQG 351
++ DLP V G
Sbjct: 850 SVGDLPVVFDG 860
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 520 RLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
R+ + F TI+T + + G+++H +DRVLT+ E RAQG PD V G + K
Sbjct: 931 RIFPNRPFPTIITMISVTDGIAGQVVHWNEDRVLTIMETRRAQGLPDDEVLVGLPAERLK 990
Query: 579 QIGNAVPPPLAKAIGYEIIK 598
+GN V +A +G + K
Sbjct: 991 IVGNGVDRKVALVLGLSLRK 1010
>gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143]
gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88]
Length = 1234
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 22/295 (7%)
Query: 27 LFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEYYRK-TKDKHFV 85
L TN SID+ I++ V F T E +++D +I Y R T D ++
Sbjct: 574 LVYTNRTRSIDVDQIERPCQVRFYT-----------EEQKRDGSIPVPYSRDGTGDAFYI 622
Query: 86 QPNARPLELA-YILKIIHSKEFLPKFP-MPLDT---PLKCLDLFSGCGGLMEGLCQAGVA 140
E ++ + H + P DT L+ L++FSG G GL + G
Sbjct: 623 TAQEINSENGPELVSLQHPPVGFKEGPNYSEDTGFRKLRALNIFSGGGSFDRGLQEGGAI 682
Query: 141 KPCWSVELERSEAASYDANF---QECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDL 197
+ W+VE +Y AN ++ + N L L+G + + + + +V
Sbjct: 683 ENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVNDFLLQALQGEAKASNL-VAKLGDVGF 741
Query: 198 IVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI 257
I AG PCQG+S +N +E S + ++ + S+ D ++P+Y ILENV + +
Sbjct: 742 ISAGSPCQGYSSVNGRKESAVSMQNSSMIASVASYVDFYRPQYAILENVIAMSNRTHERS 801
Query: 258 LQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHA 311
C C + M YQV L + ++G QSR+R+ I+ + PG +LP+ P H+
Sbjct: 802 PLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHS 856
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSY 567
+R N Q R+ T+ T P+P K G+ LH E+DRV++V E RAQGFPD+
Sbjct: 955 ARQRNCQRAWSRVHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMSVMEARRAQGFPDNE 1014
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
V G +K +GN+V +A A+G + +
Sbjct: 1015 VLVGSPAQQWKVVGNSVARQVALALGLVVRNAV 1047
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 33/173 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL GL E++ A ++ N + +V D+CN++L+++
Sbjct: 3 LATLDIFAGCGGLSYGL--------------EKAVAQAFKQNHPDATVFVDNCNVILRAI 48
Query: 178 LK--GHTQ-----------------HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK 218
++ G ++ +LP +VD I GPPCQGFS +NR +
Sbjct: 49 MEKCGDVDDCISTVEAAELAAKLDDNQKSTLPLPGQVDFINGGPPCQGFSGMNRFSDRSW 108
Query: 219 SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQ 271
SK++ ++ FLSF D F+PKY +LENV +V FN + Q LL+M YQ
Sbjct: 109 SKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQ 161
>gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR]
Length = 1236
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 151/342 (44%), Gaps = 29/342 (8%)
Query: 27 LFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEYYRK-TKDKHFV 85
L TN SID+ I++ V F T E +++D +I Y R T D ++
Sbjct: 574 LVYTNRTRSIDVDQIERLCQVRFYT-----------EEQKRDGSIPVPYSRDGTGDAFYI 622
Query: 86 QPNARPLELA-YILKIIHSKEFLPKFP-MPLDT---PLKCLDLFSGCGGLMEGLCQAGVA 140
E ++ + H + P DT L+ L++FSG G GL + G
Sbjct: 623 TAQEINSENGPELVSLQHPPVGFKEGPNYSEDTGFRKLRALNIFSGGGSFDRGLQEGGAI 682
Query: 141 KPCWSVELERSEAASYDANF---QECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDL 197
+ W+VE +Y AN ++ + N L L+G + + + + +V
Sbjct: 683 ENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVNDFLLQALQGEAKASNL-VAKLGDVGF 741
Query: 198 IVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEI 257
I AG PCQG+S +N +E S + ++ + S+ D ++P+Y ILENV + +
Sbjct: 742 ISAGSPCQGYSSVNGRKESAVSMQNSSMIASVASYVDFYRPQYAILENVIAMSNRTHERS 801
Query: 258 LQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL 316
C C + M YQV L + ++G QSR+R+ I+ + PG +LP+ P H+ +
Sbjct: 802 PLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKT 861
Query: 317 F------TINGNLVANKTSHAP-YRSITVRDAISDLPRVSQG 351
NG + P + + + +++ DLP++ +
Sbjct: 862 TQKSLGEAPNGLPFGKRHWEVPVFDFLPISESVKDLPKIGRA 903
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSY 567
+R N Q R+ T+ T P+P K G+ LH E+DRV++V E RAQGFPD+
Sbjct: 955 ARQRNCQRAWSRVHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMSVMEARRAQGFPDNE 1014
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
V G +K +GN+V +A A+G + +
Sbjct: 1015 VLVGSPAQQWKVVGNSVARQVALALGLVVRNAV 1047
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC LK + + K + LP + D I GPPCQG S NR R + KN +
Sbjct: 437 DCKDKLKEFVTKGFRSKILPLP--GDADFICGGPPCQGISGFNRFRNTKAPLDDPKNHQM 494
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
++ + +PKY+++ENV ++ F +++ L+ MNYQ ++ +G+YG+ Q
Sbjct: 495 VVYMDIVEYLKPKYVLMENVVDILRFAGGFLVRYALGRLISMNYQARLGMMAAGSYGLPQ 554
Query: 287 SRNRVVILASKPGYKLPSFPQPLH------AFSNQLFTINGNLVANKTSHAPY-RSITVR 339
R RV + S+P LP +P P H N+ I + NK +++ +
Sbjct: 555 FRMRVFMWGSQPSESLPQYPLPTHEVVVKGGIPNEFEEI--TVAYNKLDPCQLEKALYLG 612
Query: 340 DAISDLPRVS--QGANCYLFHNPPKTHFQRMMKDGSR-----IHDIHINLRELLQDHICK 392
DAI DLP V+ + + + P++ FQ+ ++ D + + ++L DH
Sbjct: 613 DAILDLPPVNNDESQDERKYGTTPQSDFQKYIRLKKSDVVGFATDKNASHPQMLYDHRPL 672
Query: 393 ILSPLMEMRIRLIPSFPNADWRDLPNICV 421
L+ R+ +P A++RD P + V
Sbjct: 673 KLNDDDYQRVCRVPKKKGANFRDFPGVLV 701
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WDE+ T+VT P N+ ++HP QDRVL++RE AR QGFPD Y G + + Y
Sbjct: 741 FGRLWWDETVATVVTRAEPHNQI--VIHPMQDRVLSIRENARLQGFPDCYQLHGPVKERY 798
Query: 578 KQIGNAVPPPLAKAIGY 594
Q+GNAV P+A A+GY
Sbjct: 799 TQVGNAVAVPVATALGY 815
>gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
Length = 369
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 184/487 (37%), Gaps = 157/487 (32%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K +DLF G GGL GL ++G+ ++E S +Y+ N + QD +L +
Sbjct: 25 IKAVDLFCGAGGLTHGLIKSGI-NVVAGYDIEESCRFAYEHNNNATFINQDVTSLSGDEV 83
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN--GLVFTFLSFCDL 235
L+ H ++ + L+ PCQ FS +RA++ K+ N L+ +F
Sbjct: 84 LR-HLKNA--------DYTLLAGCAPCQPFSTYSRAKKTTKNHQDNRWNLLASFGRLIAE 134
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMN-YQVTFDVLQSGNYGVAQSRNRVVIL 294
P ++ +ENV GL ++ + F L MN Y + + ++ +YG+AQ+R R+V++
Sbjct: 135 VLPDFVTMENVPGLA----DQKVFIDFLAQLNMNGYSIDYKIVFCPDYGMAQTRKRLVLI 190
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
AS+ G K+ S P+P S P + V D IS LP++ G C
Sbjct: 191 ASRLG-KI-SLPKP--------------------SRKPDNYLNVADVISHLPKIGAGDTC 228
Query: 355 YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
N P H +LSP+ RI+ S P W
Sbjct: 229 ---KNDPL--------------------------HKSSVLSPINIKRIK--ASVPGGSWM 257
Query: 415 DLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRN 474
D P E+L+ +SC K T I
Sbjct: 258 DWP--------------EELR---------------ASCHKKDTGKTYI----------- 277
Query: 475 NNWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTP 534
V GR++W NT P TI T
Sbjct: 278 ----SVYGRMSW----------NTPAP---------------------------TITTQC 296
Query: 535 NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG-----GICDMYKQIGNAVPPPLA 589
N G+ HPEQDR +++RE A Q FP Y F + + K IGNAVP L
Sbjct: 297 NGFG-NGRFGHPEQDRAISLREAAILQSFPADYHFHSKNTKLSVATLAKMIGNAVPVRLG 355
Query: 590 KAIGYEI 596
+ +G I
Sbjct: 356 EIVGQSI 362
>gi|428205227|ref|YP_007089580.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428007148|gb|AFY85711.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 434
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GG+ G QAG +VE++ A++ NF C V+ C V ++
Sbjct: 11 VDLFAGVGGMTLGFEQAGF-DVLAAVEIDPIHCATHQFNFPFCKVL---CQSVTETT--- 63
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
T+ + S ++D++ G PCQGFS + + R L+ + N LV FL +PKY
Sbjct: 64 STEVRSCSAIGDRDIDVVFGGSPCQGFSLIGK-RALDDPR--NALVHHFLRLVLELKPKY 120
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL N + L + Y+V D VL + NYGV Q R R+ +L +
Sbjct: 121 FVFENVPGLTIGNHRQFLSELIAAFGAGGYEVKTDYRVLNAANYGVPQDRARLFLLGCRY 180
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
G LP +PQP+ + + + N P + T+ DA+ DLP V
Sbjct: 181 GLPLPEYPQPI---TKPSLSRKSKYILNLPHLKP--TPTIWDALCDLPVV 225
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP + R +TVRE AR +PD + F ++Q+GN+VPP LA+A
Sbjct: 326 TSPRPI-------HPYKPRCITVREAARLHSYPDWFRFHQTKWHGFRQVGNSVPPLLAQA 378
Query: 592 IGYEIIKCIG 601
I EI++ +G
Sbjct: 379 IAREILRVLG 388
>gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
Length = 331
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 38/277 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG GG G + G + SVE+E +Y ANF + ++Q D +
Sbjct: 3 LTYIDLFSGAGGFSLGFDRVGFCQ-LLSVEIEPYYCETYRANFPKHHILQRDLTELPDDE 61
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L + L +VD+++ GPPCQGFS + +N L F+ L Q
Sbjct: 62 L--------LVLLDNQKVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVRVVKLTQ 113
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P++ ++ENV L N I + YQV VL + ++GV Q R+R+V + K
Sbjct: 114 PRFFVMENVARLFTHNSGRTRTEIIQHFESLGYQVECKVLNAADFGVPQLRSRIVFIGRK 173
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
K+ FP+P SH Y+ TV +AI P ++ G N +
Sbjct: 174 DKGKI-LFPEP--------------------SHREYK--TVGEAIGHFPPLNSGENSLIV 210
Query: 358 HNPPKTHFQRMM------KDGSRIHDIHINLRELLQD 388
++ H +M+ K+G +DI +LR + D
Sbjct: 211 NHEAMRHSDQMLEKMSFVKNGGNRNDIPESLRPISGD 247
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
K+ H EQ+R LTVRE A Q FPD +VF G +Q+GNAVPP LA+AI ++K
Sbjct: 269 KVFHYEQNRALTVRELAALQSFPDDFVFLGQRIAQQQQVGNAVPPLLAQAIAESVLK 325
>gi|350271400|ref|YP_004882708.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348596242|dbj|BAL00203.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 360
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 22/235 (9%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLL 178
++LFSGCGGL GL AG +VE+ + A +Y N ++I DD N+ SLL
Sbjct: 4 AIELFSGCGGLSSGLIAAGF-DILSAVEINQIAADTYRLNHPNVNLIVDDVRNVTAASLL 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ H G E+DL+ PCQGFS+L R E + +N LV FL +P
Sbjct: 63 RQHNLRIG-------ELDLLAGCSPCQGFSRL-RKGESGSTDPRNQLVLEFLRLVRGLRP 114
Query: 239 KYIILENVTGLVHFN-KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
K I +ENV GL++ ++ I L ++ Y V + ++ + +YGV Q R R V+L S+
Sbjct: 115 KTIFMENVPGLINTEYGKKLFDKILPELTRLGYAVDYKIVDTADYGVPQFRRRFVLLGSR 174
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
P+ HA + N N+ +K P+ TVR A++ P + GA
Sbjct: 175 YKRHPIELPETTHA------SPNVNIAQHKL---PWN--TVRIALNGTPVLENGA 218
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
N ++ V GR+ WD+ TI + + G+ +HP QDR +++ E A+ Q FPD+Y+F G
Sbjct: 266 NGFRDVYGRMHWDQPSPTITGGCTNITR-GRFIHPNQDRGISLYEAAKLQTFPDNYIFSG 324
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ QIGNAVP LA+ +G ++I+C+
Sbjct: 325 NFGEKSLQIGNAVPVRLAQVMGTQLIQCL 353
>gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
Length = 436
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+D F+G GG+ G QAG SVE++ A+++ NF SV C ++
Sbjct: 13 IDFFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHNFNFPFWSVF---CQSIIDITGAE 68
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
Q + E+D++ GPPCQGFS + + R LE + N LVF F+ PKY
Sbjct: 69 IRQKSAIG---DREIDVVFGGPPCQGFSLIGK-RSLEDPR--NSLVFEFIRLVIELNPKY 122
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASKP 298
++ENV G+ + + I + + YQ+ + +L + YGV Q R R+ +L +
Sbjct: 123 FVIENVGGMAIGHHKNFIAEIINEFRENGYQIEENYQILNAAQYGVPQKRERLFLLGCRQ 182
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPY-RSITVRDAISDLPRV 348
LP++PQ AF++ + KTSH+ S V DA+ DLP+V
Sbjct: 183 DLTLPTYPQ---AFTHP--------ASRKTSHSELPDSPNVWDALRDLPQV 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 326 TSPRPI-------HPYTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 378
Query: 592 IGYEIIKCIGNAVP--PPLAKAIGYE 615
+ +II+ + N +P P K +G E
Sbjct: 379 VASKIIEAL-NVIPVKPTEIKELGDE 403
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF ++I C V + +
Sbjct: 11 AVDLFAGAGGMSLGFEQAGFDV-LASVEIDPIHCATHEYNFPFSTMI---CRSVTEITAR 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + +S ++D++ GPPCQGFS + + R L+ + N L++ FL PK
Sbjct: 67 ---EIRNLSPIGTQDIDVVFGGPPCQGFSLIGK-RLLDDPR--NDLIYHFLRLVLELNPK 120
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ILENV G+ ++++ I + + NY V +L + +YGV Q+R R+ +L S+
Sbjct: 121 YFILENVPGMALGKHKKLIEEIINKFQENNYNVEENIKILNAAHYGVPQNRERLFLLGSQ 180
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
G LP +P+P+ A N N + ++ TV +A+ DLP V+
Sbjct: 181 KGLVLPQYPEPITA---------PNPFQNLS-----KTPTVWEALQDLPEVNH 219
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 317 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 369
Query: 592 IGYEIIKCIGNAVPPP 607
+ EI+K + + P
Sbjct: 370 VALEIMKVLRKEISKP 385
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 65/312 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE----CSVIQ----DDC 170
+ +DLF GCGG+ EG +G + +++ +++ NF + C+ I+ DD
Sbjct: 4 RVIDLFCGCGGISEGFRLSGF-EIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKNDDI 62
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR-ARELEKSKLKNGLVFTF 229
+ L ++D+IV GPPCQGFS NR +E+E + N L + +
Sbjct: 63 PFMFDLL---------------GDIDVIVGGPPCQGFSSANRWQKEIEDPR--NKLFYEY 105
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+ F ++ +PK +++ENV G++ + I+ L + Y V VL + YGV Q R
Sbjct: 106 IRFVEVLKPKVVLIENVRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEYGVPQKRL 165
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL---- 345
R LA++ PQ + K P + V++AI +L
Sbjct: 166 RAFFLATR-----QDIPQ---------------ITFEKLVKQP--KVLVKEAIEELYVLE 203
Query: 346 PRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
+ +G YL + P + +Q ++ N + +H K + + + RI +
Sbjct: 204 KKAQKGETTYLLQSKPASPYQNYLR----------NTENKIMNHEIKYPADIQQQRISHV 253
Query: 406 PSFPNADWRDLP 417
P +WRD+P
Sbjct: 254 PQ--GGNWRDIP 263
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
R N RL ++ TI T N H R+ TVRE AR Q F DS+VF
Sbjct: 271 RKNRHSSAYKRLNEEDVSVTIDTG----NAHSNYFHTIFHRIPTVREAARLQSFKDSFVF 326
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G Y+Q+GNAVPP LAKAI I + I N
Sbjct: 327 SGSRTGQYRQVGNAVPPLLAKAIADVIKEGITN 359
>gi|340518715|gb|EGR48955.1| predicted protein [Trichoderma reesei QM6a]
Length = 1044
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L+ +DLF G G GL G + W+ + + +Y AN Q+ + +
Sbjct: 632 LRGMDLFCGGGNFGRGLEDGGGIEMKWANDYDSKAIHTYMANVKNPQDVHPFLGSIDDLQ 691
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ ++G ++P +VD + G PC GFS+L + + LV F SF D
Sbjct: 692 RLAIQGDFAD---NVPLIGDVDFVSGGSPCPGFSRLTNDKTTAAQRKNQSLVAAFASFVD 748
Query: 235 LFQPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
L++PKY +LENV G+VH + ++ + L+ + YQ F L + + G Q R+R+
Sbjct: 749 LYRPKYGVLENVPGMVHKKHDRDRDVFSQLICALVGLGYQTQFFYLDASSCGSPQRRSRI 808
Query: 292 VILASKPGYKLPSFPQPLHAFSNQL------FTINGNLVANKTSHA--PYRSITVRDAIS 343
I+ + PG +LP P H+ + NG +A++ A P++ ++ +A +
Sbjct: 809 FIVFAAPGLELPDKPVQTHSHPPNTREHGIGWLPNGQHMASREMPAATPFKFVSAEEATA 868
Query: 344 DLPRV 348
DLP +
Sbjct: 869 DLPPI 873
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GR+ + F+T+VT + K G++LH ++R +T+ E RAQGF D V G Y
Sbjct: 958 GRMFPNRLFETVVTRQTLGDAKNGRLLHWRENRPVTIMEARRAQGFLDEDVLLGDPPTQY 1017
Query: 578 KQIGNAVPPPLAKAIG 593
+ +GN+V A A+G
Sbjct: 1018 RIVGNSVARQPAVALG 1033
>gi|336436234|ref|ZP_08615947.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008274|gb|EGN38293.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 722
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 40/248 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV---- 173
++ + LFSGCGGL G +AG P + E+++ A++ AN + +I+ D V
Sbjct: 1 MQLISLFSGCGGLDLGFERAGFEIPV-ANEIDKKIWATFRANHPKTHLIEGDIRKVNKED 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
L+ L G EVD I+ GPPCQ +S+ + +E ++ L F ++
Sbjct: 60 LQEFLSG-------------EVDGIIGGPPCQSWSEAGSLKGIEDAR--GQLFFDYIRIL 104
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
FQPK+ + ENV+G++ +E +Q IF Y VTF ++ + +YGVA+ R RV
Sbjct: 105 KEFQPKFFLAENVSGMLANRHSEAVQNIFRLFESAGYDVTFTMVNAKDYGVAEERKRVFY 164
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + + FP+ ++ + +T+RD I DL + A
Sbjct: 165 IGFRHDLNIRFGFPKG-------------------STKEDEKKLTLRDVIWDLQESAVPA 205
Query: 353 NCYLFHNP 360
HNP
Sbjct: 206 GPKNHHNP 213
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI-GNA 603
R +T+RE AR QGFPD + F YK IGNAVP LA I I K + GN
Sbjct: 281 RRMTIREVARVQGFPDEFQFLYEDTNTAYKMIGNAVPVNLAYEIAVAIRKYLEGNG 336
>gi|409422062|ref|ZP_11259177.1| modification methylase XorII [Pseudomonas sp. HYS]
Length = 428
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 35/228 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +VE++ A+++ NF C+ I C V L G
Sbjct: 14 IDLFAGAGGLSLGFEQAGF-DIAAAVEIDPIHCATHEFNFPNCTTI---CASVTD--LSG 67
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ K ++D++ G PCQGFS + + R L+ S+ N LVF ++ +PKY
Sbjct: 68 PEIRLRAGIGDK-DIDVVFGGAPCQGFSMIGK-RALDDSR--NQLVFHYVRIVAELKPKY 123
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL E L+ + L + Y VT + VL + +YGV Q R R+ ++ ++
Sbjct: 124 CVFENVKGLTLGKHAEFLKELIAALGEAGYDVTLPYRVLNAADYGVPQDRKRLFLIGTRR 183
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
G P +P+P QL +N V +AISDLP
Sbjct: 184 GLNTPEYPEP------QLKRVN-----------------VGEAISDLP 208
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A +S T+P P+ HP RV+TVRE AR FPD + F ++QIG
Sbjct: 301 AGTDSARGAFTSPRPI-------HPNLPRVITVREAARLHSFPDWFRFHTTKWHGFRQIG 353
Query: 582 NAVPPPLAKAIGYEIIKCIG 601
N+VPP L +AI +I +G
Sbjct: 354 NSVPPLLGRAIASSVISAMG 373
>gi|396466512|ref|XP_003837707.1| hypothetical protein LEMA_P122420.1 [Leptosphaeria maculans JN3]
gi|312214270|emb|CBX94263.1| hypothetical protein LEMA_P122420.1 [Leptosphaeria maculans JN3]
Length = 1340
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 147/345 (42%), Gaps = 42/345 (12%)
Query: 27 LFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQ 86
L LT+ +I +S +++ V ++T +E+ +I + Y R +
Sbjct: 565 LVLTDEYSTIAISRLQRECFVRYLT-------------KEQLHSIPSPYDRGGAGDRWFV 611
Query: 87 PNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSV 146
+ L A + ++ S + + P+ LK L +FSG G L G+ + G + +V
Sbjct: 612 SMSIALPDAQLRFLVQSPKCFREAPVTKCRKLKGLSIFSGGGSLDRGIEEGGGVEFHTAV 671
Query: 147 ELERSEAASYDANFQE------CSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVA 200
+ + AN + C + D LK+ LKG + + + V+ + A
Sbjct: 672 DFSPHAIHTQRANARNPKICLYCGSVDD----YLKAALKGTNRDLIAGIGK---VEFLCA 724
Query: 201 GPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVH----FNKNE 256
G PC GFS L + + S + TFLSF DLF+P Y +LENV + F
Sbjct: 725 GSPCPGFSTLQQNFRSKASLRNASHISTFLSFVDLFRPLYGVLENVVSMASTRTGFEDEN 784
Query: 257 ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQL 316
+L + CL+ M YQV ++ NYG AQ R+R++I + PG L QP H S
Sbjct: 785 VLSSVIACLVSMGYQVNQYIMDGWNYGSAQRRSRILITIAAPG--LTPVDQPWHTHSASY 842
Query: 317 FTI---------NGNLVANKTSH-APYRSITVRDAISDLPRVSQG 351
NG + + S+ P+ + +DLP + G
Sbjct: 843 EVTKSKSLGNLPNGQRLGERESYPTPFPVPSAGQVAADLPDIGNG 887
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
++ G +H QDR +T+ E RAQ +PD G + ++ +GN V ++ A G +
Sbjct: 969 SRNGATIHWAQDRPITILEARRAQNYPDDEPIIGTLAQQFEIVGNGVDRMVSLAFGLSLR 1028
Query: 598 KCI 600
+ +
Sbjct: 1029 QAL 1031
>gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 442
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +V+++ A++ NF +C+ + C V+
Sbjct: 25 IDLFAGAGGLSLGFEQAGF-DLVAAVDIDPIHCAAHKFNFPKCATV---CKSVVDVTGDE 80
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ G+ K ++D+++ G PCQGFS + + R L+ S+ N LV ++ +PKY
Sbjct: 81 LRRIAGIG---KRDIDIVIGGAPCQGFSLIGK-RALDDSR--NQLVHHYVRVVMELKPKY 134
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L+ + Y V D VL + +YGV Q R R++++ ++
Sbjct: 135 FVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGVPQDRRRLILMGARK 194
Query: 299 GYKLPSFPQP 308
G LP++P+P
Sbjct: 195 GLPLPAYPEP 204
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR +PD + F ++QIGN+VPP LA+A
Sbjct: 321 TSPRPI-------HPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARA 373
Query: 592 IGYEIIKCI 600
+G +I+K +
Sbjct: 374 VGGQIMKAL 382
>gi|62297515|sp|P52311.2|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName:
Full=Cytosine-specific methyltransferase XorII
Length = 424
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +V+++ A++ NF +C+ + C V+
Sbjct: 7 IDLFAGAGGLSLGFEQAGF-DLVAAVDIDPIHCAAHKFNFPKCATV---CKSVVDVTGDE 62
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ G+ K ++D+++ G PCQGFS + + R L+ S+ N LV ++ +PKY
Sbjct: 63 LRRIAGIG---KRDIDIVIGGAPCQGFSLIGK-RALDDSR--NQLVHHYVRVVMELKPKY 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L+ + Y V D VL + +YGV Q R R++++ ++
Sbjct: 117 FVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGVPQDRRRLILMGARK 176
Query: 299 GYKLPSFPQP 308
G LP++P+P
Sbjct: 177 GLPLPAYPEP 186
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR +PD + F ++QIGN+VPP LA+A
Sbjct: 303 TSPRPI-------HPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARA 355
Query: 592 IGYEIIKCI 600
+G +I+K +
Sbjct: 356 VGGQIMKAL 364
>gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
Length = 351
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKS 176
+K +D F GCGG +G AG ++ ++S A SY ANF + I D N+ ++
Sbjct: 1 MKVIDFFCGCGGASKGFELAGF-DIALGIDFDKSAADSYKANFPNTAFINSDIRNVRVRD 59
Query: 177 LLKGHTQHKGVSLPQKHEVDLIV-AGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ + +P E DLI A PCQ FS N+ R+ + + L+ F
Sbjct: 60 IAE--------IVPDWKENDLIFCACAPCQPFSSQNKKRD--SADTRRSLLSETKRFIRA 109
Query: 236 FQPKYIILENVTGL--VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
F+PKYI +ENV G+ V +N L + +YQ + V+ S YGV Q R R+V+
Sbjct: 110 FRPKYIFIENVPGIQSVKLTENGPFADFLSFLTRFDYQYEYHVISSEFYGVPQQRKRLVV 169
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
LA G P+FP P H + F TVRD I LPR+ G
Sbjct: 170 LAKLHGS--PAFPTPTHGEQGKPFA------------------TVRDYIGQLPRLQAG 207
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQGFPDSYVFRGGIC 574
V GR+ WDE T+ T ++ G+ HP+ Q R +T RE A Q FP + F G
Sbjct: 259 VYGRMKWDEPCKTLTTKCTSIS-NGRFGHPDTTQHRAITFREAALLQTFPIDFQFEGNRV 317
Query: 575 DMYKQIGNAVPPPLAKAIGYEIIK 598
KQIGNAVP LAK + K
Sbjct: 318 SKSKQIGNAVPVLLAKCFAEAMWK 341
>gi|452002619|gb|EMD95077.1| hypothetical protein COCHEDRAFT_1043573, partial [Cochliobolus
heterostrophus C5]
Length = 1005
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC--- 170
LDT L+ + LF G G L GL + G + V+ + + AN + + C
Sbjct: 607 LDTKLRGVSLFGGGGVLDRGLEEGGAVEFRTVVDSSQHAIRTQQANINNHTTVCLYCGSV 666
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG-LVFTF 229
N L S LKG T + + +VD I AG PC FS L + L S L+N L+ TF
Sbjct: 667 NTFLDSALKGDTNF----IVRVGDVDFIAAGCPCVAFSGLQQ-NPLSLSSLQNASLISTF 721
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
SF DL++P Y +LENV + L + CL+ + YQV+ ++ S NYG AQ R+
Sbjct: 722 CSFVDLYRPLYGVLENVLNISSERAGSALSQMVACLVSLGYQVSHYIMDSWNYGSAQRRS 781
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTI---------NGNLVANKTSH-APYRSITVR 339
R V+ + PG L QP H S + NG A + + P+ +
Sbjct: 782 RAVVTIAAPG--LQPIVQPYHTHSRSDEEVRSRSLGQLPNGEFCAGRQHYPTPFYHVPAE 839
Query: 340 DAISDLPRV 348
S LP +
Sbjct: 840 TVSSGLPNI 848
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
++ G ++H E+ R ++++E RAQG PD+ G I D ++ GN V + AIG ++
Sbjct: 932 SRNGAVMHWEEPRTISLQEARRAQGIPDAEPIIGTIRDQWRIAGNGVDRKVGFAIGLGLL 991
Query: 598 KCI 600
+ +
Sbjct: 992 QAV 994
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 197 LIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE 256
+IV GPPC+GFS + R E +NGL F+++ D F+P + I+ENV GL N
Sbjct: 1 MIVGGPPCKGFSSIRPDRGTEAEDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHNDGI 60
Query: 257 ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFS--- 313
+Q I + + Y + ++ N+G+ Q R R++++ S ++ FP+P H +
Sbjct: 61 TIQKIIDSVRDIGYSADWRIVNGANFGLPQRRERLIMIGSGDD-RVIEFPRPTHQANGRT 119
Query: 314 ------NQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQR 367
+++ T L + + T+ DAI DLP + G + P + +Q
Sbjct: 120 IGYKDESKVITAQPTLDNFRAGTSLPEGRTIMDAIDDLPELEAGEEVTEYTKPAQNEYQE 179
Query: 368 MMKDGSRIHDIH 379
M+ S +H
Sbjct: 180 TMRKNSNELSLH 191
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
K +HP QDR LT RE AR Q FPD + F G D+ +QIGNAVPP L + +
Sbjct: 262 KCIHPYQDRALTPREGARIQSFPDDFEFVGSRSDIVEQIGNAVPPLLGRVLA 313
>gi|442321096|ref|YP_007361117.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488738|gb|AGC45433.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 470
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 22/228 (9%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GG+ G QAG +VE++ AA + NF EC+V+ + V + ++
Sbjct: 7 IDLFAGAGGMSLGFEQAGFDVRA-AVEVDPVHAAVHTFNFPECAVLPRSASEVTAAEIRA 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
G+ K VD + GPPCQGFS + + R LE + N LV F+ + +
Sbjct: 66 AA---GLG---KSPVDCVFGGPPCQGFSLMGQ-RALEDPR--NALVLEFVRLVAELEART 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQ--VTFDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL N L + + Y+ + + VL + +YGV Q R R+++L +
Sbjct: 117 FVFENVKGLTVGNHRRFLDELVRAFDDVGYEARMPWQVLDAASYGVPQHRERLILLGVRK 176
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
G LP +P P ++ +LV AP T R+A+ DLP
Sbjct: 177 GGTLPRYPAPTTTPAD----WERDLV------APPSGPTCREALGDLP 214
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ H E R +TVRE AR GFPD + F+G +QIGNAVPPPLA+A
Sbjct: 318 TSPRPI-------HYEHARCVTVREMARLHGFPDWFRFQGTKWHGARQIGNAVPPPLARA 370
Query: 592 IGYEIIKCI 600
I E++ +
Sbjct: 371 IASEVVSSL 379
>gi|428300014|ref|YP_007138320.1| Xre family transcriptional regulator [Calothrix sp. PCC 6303]
gi|428236558|gb|AFZ02348.1| transcriptional regulator, XRE family [Calothrix sp. PCC 6303]
Length = 484
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 30/282 (10%)
Query: 112 MPLDTPLKC-----LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI 166
+P PL C +DLF G GGL G + V+L ++ N +
Sbjct: 102 IPRRKPLDCTKKPVIDLFCGVGGLSYGFEMHEEFQVVAGVDLLSDRLQTFSRNHGTANAY 161
Query: 167 QDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLV 226
D N + +L H V IV GPPCQGFS + R +E++ +N L
Sbjct: 162 GQDINTLSTDILYNENPHPFV----------IVGGPPCQGFSSIRPFRNIERNDPRNNLA 211
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F QP++I+ ENV GL+ + + Q I ++ Y+ VL + YG+ Q
Sbjct: 212 EEFCRIVHNLQPEWIVFENVVGLLTHSNGKTFQTIVEAFEEIGYRTAAKVLNAAYYGLPQ 271
Query: 287 SRNRVVILASKPGYKLPSFPQPLH------AFSNQLFTI--NGNLVANKTSHAPYRSITV 338
R R++I+ S+ G + QP H Q F + + L+ + S +ITV
Sbjct: 272 CRERLIIVGSRAGKPF-KWTQPTHWCEHRSMAGRQEFILKPSKGLIQDLQS-----AITV 325
Query: 339 RDAISDLPRVSQGANCYLFH-NPPKTHFQRMMKDGSRIHDIH 379
+AI DLP V G + + T ++ +++G++ +H
Sbjct: 326 DEAIHDLPEVEAGGRATTYQCDIESTPYELFIRNGAQQLKMH 367
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+ +HP Q R LT RE AR QGF D++ F G + KQIGNAVPP L + + I++
Sbjct: 426 RCIHPHQHRALTPREGARLQGFLDTFEFIGTRSQIVKQIGNAVPPLLGRTVAQAILE 482
>gi|302656192|ref|XP_003019852.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
gi|291183624|gb|EFE39228.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
Length = 1085
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L L+LFSG G GL + G + W+VE + +Y AN + + ++ C V L
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGAIESKWAVEWGLHQMLTYRANHPDGNGLKLFCGSVNDYL 691
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T + + + + + I AG PCQG+S N ++ E S + ++ + S+ DL++
Sbjct: 692 FQAITGKENIYVARIGDAHFISAGSPCQGYSSANAHKDNEVSMRNSSMIASVASYIDLYR 751
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENV G+ ++ L + + M YQ L + ++G QSR+R+ I +
Sbjct: 752 PQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQTRVFNLDAWSFGAPQSRSRLFIAIT 811
Query: 297 KPGYKLPSFPQPLHAF-----SNQLF-TINGNLVANKTSHAP-YRSITVRDAISDLPRV 348
PG + P H+ S L NG+ + P + ++ R A DLP +
Sbjct: 812 APGLHILEHPALTHSHPPGTKSRALGDNPNGSTFGERRWDTPVFEFVSARSATQDLPPI 870
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQG 562
L H+A R+ ++ F + T P G+ LH ++DR++TV+E RAQG
Sbjct: 921 LEHSARMKAATSKAWSRIYPEKPFPAVTTGVCPFCIFTGRWLHWQEDRLVTVQEVRRAQG 980
Query: 563 FPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
+PD+ V G +K +GN+V +A A+G + + CI N
Sbjct: 981 YPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREACIRN 1021
>gi|407928299|gb|EKG21159.1| hypothetical protein MPH_01515 [Macrophomina phaseolina MS6]
Length = 1010
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 20/248 (8%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLV 173
P+ LD F+G G GL + ++++ ++ +Y AN + C V N
Sbjct: 513 PMVGLDAFAGGGNFGRGLEDGAAVQFRYAIDCAKNAVLTYKANLSGQEPCWVYWGSVNDY 572
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
L+ + G+ Q +D I AG PCQGFS L R + E S ++ + +F
Sbjct: 573 LREAMDGNNDDY---FAQVGSIDFIAAGSPCQGFSVLQRDKSSESSLRNISMIASVAAFI 629
Query: 234 DLFQPKYIILENVTGLVHFNKNE--ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
D ++PKY +LENV + H + + I + L+ + YQV+ L + ++G Q R+R+
Sbjct: 630 DFYRPKYALLENVVAMAHRGREQLGIFPQLLCTLVGLGYQVSQHYLDAWSFGDPQRRSRL 689
Query: 292 VILASKPGYKLPSFPQPL----HAFSNQLFTINGNLVAN------KTSHAPYRSITVRDA 341
+ + PG L P P H + NL N + P+ I+V +
Sbjct: 690 FVAIAAPG--LTPMPPPTITHSHPRGTPAVALGRNLANNLRFGERRFGPTPFEYISVEQS 747
Query: 342 ISDLPRVS 349
+ DLP V
Sbjct: 748 MGDLPDVG 755
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 503 SLVHTASRNNNWQGVLGRLAWDESFDTIVTTP-NPLNKQGKILHPEQDRVLTVREYARAQ 561
S + ++ + +W V G D +TI T P G++LH Q R LT+RE RAQ
Sbjct: 816 SALKISAGSQSWSRVCG----DGLTNTITTAPVASCAINGRVLHWRQHRALTIREARRAQ 871
Query: 562 GFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
GF D V G + +K IGN+V +A A+G +
Sbjct: 872 GFDDGDVITGTSKEQWKIIGNSVSRSVALALGMAL 906
>gi|386858204|ref|YP_006262903.1| methyltransferase protein [Deinococcus gobiensis I-0]
gi|380002924|gb|AFD28110.1| methyltransferase protein [Deinococcus gobiensis I-0]
Length = 536
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 40/268 (14%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
P + LDLFSGCGGL G +AG + +VE +++ AAS+ NF + C++V +
Sbjct: 50 APPRVLDLFSGCGGLSLGFSKAGF-QISAAVEFDQAAAASHAVNFHQGKA----CHMVAR 104
Query: 176 SLLKGHTQHKGVSL---PQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLKNG 224
+ Q P +D+IV GPPCQ F+++ R++ E + ++
Sbjct: 105 DITITPPQKVADEFELGPVAEGIDVIVGGPPCQAFARVGRSKLREILEHPEAYRQDPRSR 164
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
L +L + + FQP +++ENV +++ I + L + Y + +L + YGV
Sbjct: 165 LYMEYLKYVEAFQPVALLMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAYYGV 224
Query: 285 AQSRNRVVILASKP--GYKLPSFPQPLHAF--------SNQL---FTINGNLVAN----K 327
Q R R+ ++A + G ++ SFP P H S Q+ F G L +
Sbjct: 225 PQMRERMFLVAYRQELGQEV-SFPLPTHWLRLPPGYEGSRQVALKFLKRGGLFEEAPQFR 283
Query: 328 TSHAPYR------SITVRDAISDLPRVS 349
H P ++T R+A+SDLP ++
Sbjct: 284 YVHPPEATPDLTPAVTAREALSDLPTIT 311
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
Q R ++VRE AR Q FPD +VFRG + +KQIGNAVPP LA AI E+ + +
Sbjct: 462 QARTISVREAARLQSFPDGFVFRGTMNPAFKQIGNAVPPLLAWAIASEMRQTL 514
>gi|399524187|ref|ZP_10764756.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
gi|398374672|gb|EJN52247.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
Length = 429
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 112 MPLD--TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
MPLD PL +DLF+G GGL GL QAG + +VE + AA ++ NF D
Sbjct: 1 MPLDYTRPL-AVDLFAGAGGLSLGLEQAGY-EIAAAVEYDPIHAAVHEYNFPYGKTFARD 58
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
+ + ++ ++ E+ L+ GPPCQG S + R R ++ + N L+ +
Sbjct: 59 VTGITGAEIRIKSEIG------DREIALVAGGPPCQGISLIGR-RAIDDPR--NALLKEY 109
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQS 287
+ QP++ ++ENV GL +L + L YQV + VLQ+ +YG QS
Sbjct: 110 VRLVLELQPRHFLMENVAGLTVGKHRHLLTEVIDLLSDGGYQVLTPYRVLQAADYGTPQS 169
Query: 288 RNRVVILASKPGYKLPSFPQPL 309
R R+++L ++ LP +P+PL
Sbjct: 170 RKRLILLGAREDVPLPHYPEPL 191
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
+HP RV+TVRE AR G+PD + F + +++IGN+VP L +A+G +++
Sbjct: 331 IHPTYPRVITVREAARLHGYPDWFRFHVTKWNGFREIGNSVPARLGRALGAALLQA 386
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 130/300 (43%), Gaps = 50/300 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GGL G Q G + + E + S A +Y N + +I D
Sbjct: 5 VIDLFAGVGGLSLGFEQEGF-EVVLANEYDESIANAYKKNHRNTKMIVGDI--------- 54
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
K V P ++D+I+ GPPCQGFSQ + + + + N L F+S L +P
Sbjct: 55 AELDIKNVFCPYVGKIDVIIGGPPCQGFSQKGQRKTINDDR--NFLFKYFVSVVGLIKPM 112
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
Y ++ENV L+ K + I+ + Y ++ VL + ++GV Q+R R VI+ K G
Sbjct: 113 YFVMENVPNLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAADFGVPQNRKRAVIIG-KRG 171
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL--F 357
FP+P + T+ DAISDL + G + +
Sbjct: 172 LAPAEFPKPKN-----------------------EKNTIWDAISDLAFLESGEGNEVQDY 208
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
++ +Q++M+ S L +H+ S + R++LIP PNA LP
Sbjct: 209 RKAAESFYQQVMRKKS----------TQLYNHVATNHSKVALERLKLIP--PNAGREVLP 256
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 514 WQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G R+ DE T+ T TP+ GK HP +R +TVRE AR Q FPD + F
Sbjct: 265 YSGTWTRMRKDEVSVTVTTRFDTPS----SGKFTHPFLNRAITVREAARIQSFPDDFRFF 320
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEII 597
G KQ+GNAVPP LA AI I+
Sbjct: 321 GTKTSQMKQVGNAVPPMLANAIAKTIL 347
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 18/249 (7%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL--KNGLVFTFLSFCDLFQPKYIILENV 246
LP +VD++ GPPCQG S NR R E +N + F+ +PK++++ENV
Sbjct: 394 LPLPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENV 453
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ F + + + L+ M YQ ++ +G+YG+ Q R RV + + P LP+FP
Sbjct: 454 VDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPAFP 513
Query: 307 QPLHAF---SNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL-----FH 358
P H N + N+V + +++ + D+ISDLP V NC +
Sbjct: 514 LPTHDAIYKGNVPNQFSRNVVKHIGERQLEKALFLGDSISDLPPVK---NCETRDEIPYR 570
Query: 359 NPPKTHFQRMMKDGSRIHDIHIN-----LRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ PKT FQ+ ++ + + + DH L+ R IP A++
Sbjct: 571 DGPKTEFQKRIRSARDDFAVFYGRGPRAMNSTVHDHRPLRLNDDDYQRACRIPKRKGANF 630
Query: 414 RDLPNICVK 422
RDL + +K
Sbjct: 631 RDLGGLKIK 639
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
R+ WDE+ T++T P N ++LHP QDRVLTVRE AR QGFPD Y G + + Y
Sbjct: 678 FARMWWDETVPTVITRAEPHNH--RMLHPTQDRVLTVRENARLQGFPDWYKLTGSVKERY 735
Query: 578 KQIGNAVPPPLAKAIGYEI 596
Q+GNAV P+A+A+G+ +
Sbjct: 736 IQVGNAVAVPVARALGFSL 754
>gi|421781437|ref|ZP_16217903.1| modification methylase XorII [Serratia plymuthica A30]
gi|407756341|gb|EKF66458.1| modification methylase XorII [Serratia plymuthica A30]
Length = 388
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 43/258 (16%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
++ L +DLFSGCGG G +G +V+++ ++Y NF VI D +L
Sbjct: 1 MNKKLNIIDLFSGCGGFGLGAELSGFNTYA-AVDIDSDLQSAYKRNFPNTHVINGDLSLF 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
K+ + + +E+D ++ GPPCQGFS++ + K +N LV+ F
Sbjct: 60 SKNTWE--------FILGDNEIDGVIGGPPCQGFSRMGKKL---KDDPRNSLVYHFYRHV 108
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD-VLQSGNYGVAQSRNRVV 292
D+ +PK+ I+ENV G++ + E L L+ NY++ V+ + NYG R RV+
Sbjct: 109 DIIRPKFFIMENVEGILDKDSRESLFSAIE-LVSKNYKIIGPIVIDASNYGAPTIRKRVI 167
Query: 293 ILASKPGY--KLPS--FPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR- 347
++ + GY KL S PL+ N++F V+DAISDLP
Sbjct: 168 VIGYREGYIDKLESKDLSPPLN--KNKIF--------------------VKDAISDLPSP 205
Query: 348 VSQG--ANCYLFHNPPKT 363
+SQ ++ Y + N PKT
Sbjct: 206 ISQTKKSDDYGWANYPKT 223
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
+HP++ RV+TVRE AR QGFPD + F ++ IGN+V P +++ I
Sbjct: 316 IHPDEPRVITVREAARLQGFPDWFTFHNTKWHSFRMIGNSVSPIVSEYI 364
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ L++FSG G GL + G K W+VE + +Y AN + ++ V L
Sbjct: 658 LRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGSVNDFL 717
Query: 178 LKGHTQ--HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
L+ Q G + + +V++I AG PCQG+S +N + S + ++ + S+ D
Sbjct: 718 LQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQNSSMIASVASYVDF 777
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
++P+Y ILENV + + C C + M YQ L + ++G QSR+R+ I+
Sbjct: 778 YRPQYAILENVIAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSRLFIV 837
Query: 295 ASKPGYKLPSFPQPLHAFSNQLF------TINGNLVANKTSHAP-YRSITVRDAISDLPR 347
+ PG +LP+ P H+ + NG + P + + + ++ DLPR
Sbjct: 838 IAAPGLQLPAHPPLTHSHPPKTTQKSLGEAPNGLPFGKRHWEIPVFDFLPISQSLKDLPR 897
Query: 348 VSQGANC--YLFHNPPK------THFQRMMKDGSRIHDIH 379
+ G Y H P + H + RI +H
Sbjct: 898 IRTGITPIDYPDHRPTRFESAVNQHIINSVPKAPRIQGLH 937
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFP 564
H +R N Q R+ T+ T P+P + G+ LH E+DRV+TV E RAQGFP
Sbjct: 949 HRNARQRNCQRAFSRIHPRFLMPTVTTFPSPYCRFTGRWLHWEEDRVMTVMEARRAQGFP 1008
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
D V G +K +GN+V +A A+G
Sbjct: 1009 DDEVLVGSPVQQWKTVGNSVARQVALALG 1037
>gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334]
gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334]
Length = 351
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 182/489 (37%), Gaps = 157/489 (32%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF G GGL G+ QAG+ +++ +Y+ N +D +LK +
Sbjct: 3 INAVDLFCGVGGLTYGIQQAGI-NVVAGYDIDEKSKFAYEYN--------NDAKFILKDI 53
Query: 178 LKGHTQHKGVSL-PQKHEVDLIVAGPPCQGFSQLN-RARELEKSKLKNGLVFTFLSFCDL 235
G + + L P ++ +++ PCQ FS + + + E +K K L+ F +L
Sbjct: 54 -NGIEDDEILGLYPSDTDIKVLIGCAPCQPFSTYSHKYQNNENTKKKIDLLDCFGRQVEL 112
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+P + +ENV K E+ L K Y+VT+ V+ + +YGV Q+R R+++LA
Sbjct: 113 VKPDIVSMENVP---QMQKKEVFHRFRTLLEKNGYKVTYKVVYAPDYGVPQTRKRLLLLA 169
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
SK G P+ N +H T+RD I LP + G
Sbjct: 170 SKFGDISLIEPE-----------------FNSDTHP-----TLRDTIEKLPEIKAGETYK 207
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
H+P H C+ LS L RIR S P WRD
Sbjct: 208 --HDPL---------------------------HRCRNLSDLNLKRIR--QSKPGGTWRD 236
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
+ + L A KK S
Sbjct: 237 --------------WDDDLLLEAYKKDS------------------------------GK 252
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ V GRL WD+ NTI TT
Sbjct: 253 TFGSVYGRLEWDKP------ANTI--------------------------------TTQF 274
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF----RGG---ICDMYKQIGNAVPPPL 588
P G+ HPEQDR L++RE A Q FP +Y F +GG I + QIGNAVPP L
Sbjct: 275 PGIGNGRFGHPEQDRALSLREGALLQTFPLNYEFVDPKQGGNYPISQVALQIGNAVPPKL 334
Query: 589 AKAIGYEII 597
+ IG II
Sbjct: 335 GEIIGESII 343
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ L++FSG G GL + G K W+VE + +Y AN + ++ V L
Sbjct: 658 LRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGSVNDFL 717
Query: 178 LKGHTQ--HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
L+ Q G + + +V++I AG PCQG+S +N + S + ++ + S+ D
Sbjct: 718 LQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQNSSMIASVASYVDF 777
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
++P+Y ILENV + + C C + M YQ L + ++G QSR+R+ I+
Sbjct: 778 YRPQYAILENVIAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSRLFIV 837
Query: 295 ASKPGYKLPSFPQPLHAFSNQLF------TINGNLVANKTSHAP-YRSITVRDAISDLPR 347
+ PG +LP+ P H+ + NG + P + + + ++ DLPR
Sbjct: 838 IAAPGLQLPAHPPLTHSHPPKTTQKSLGEAPNGLPFGKRHWEIPVFDFLPISQSLKDLPR 897
Query: 348 VSQGANC--YLFHNPPK------THFQRMMKDGSRIHDIH 379
+ G Y H P + H + RI +H
Sbjct: 898 IRTGITPIDYPDHRPTRFESAVNQHIINSVPKAPRIQGLH 937
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFP 564
H +R N Q R+ T+ T P+P + G+ LH E+DRV+TV E RAQGFP
Sbjct: 949 HRNARQRNCQRAFSRIHPRFLMPTVTTFPSPYCRFTGRWLHWEEDRVMTVMEARRAQGFP 1008
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
D V G +K +GN+V +A A+G
Sbjct: 1009 DDEVLVGSPVQQWKTVGNSVARQVALALG 1037
>gi|433603053|ref|YP_007035422.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407880906|emb|CCH28549.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 129/301 (42%), Gaps = 59/301 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+GCGG+ G AG +P +VE + AA+Y ANF E + D +
Sbjct: 2 LSMIDLFAGCGGMTAGFASAGGYRPVMAVEWDLRAAATYAANFGEDHMRWSDIAAIPDE- 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
S+P EVDLIV GPPCQGFS L +R++ +N L +L F +
Sbjct: 61 ----------SIP---EVDLIVGGPPCQGFSNLG-SRDVNDP--RNSLWREYLRFVRTAR 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV + + +LQ Y+++ +L + ++GV Q R R +++ S+
Sbjct: 105 PKVFVIENVDRFLSSTEFALLQAETE-----GYELSSGILLAADFGVPQRRRRAIVIGSR 159
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G P PL A +H TVRD ++ LP +
Sbjct: 160 IG------PIPLPA----------------PTHPRGSWHTVRDVLTGLPELP---TTTAL 194
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
+ F + M + D+HI + +PL R R +P P DLP
Sbjct: 195 PDSTVEFFGQTMPGRHKSPDLHIG----------RNPTPLSVQRYRHVP--PGGGRFDLP 242
Query: 418 N 418
+
Sbjct: 243 D 243
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQ---------DRVLTVREYARAQGFPDSY 567
V+GR+ WDE TI T K G+ LHP+ DR +T E AR Q FPD +
Sbjct: 260 VMGRMRWDEPSLTIRTEFYKPEK-GQYLHPQWEPGEDGHRVDRPITHLEAARLQSFPDDF 318
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVP 605
+ G ++ +QIGNAVPP LA+AI + + A P
Sbjct: 319 EWCGTKIEVARQIGNAVPPSLARAIATHLEPYLTGAAP 356
>gi|416389243|ref|ZP_11685287.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
gi|357264261|gb|EHJ13173.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
Length = 291
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 36/253 (14%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LDLFSGCGGL G QAG + ++ + A++ N I D + S
Sbjct: 10 LDLFSGCGGLSYGFQQAGF-EVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSS---- 64
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+S +D+IV GPPCQGFS ++ R + + N L +FL D FQPK
Sbjct: 65 -----KISQQINKSIDVIVGGPPCQGFS-ISGKRNPDDPR--NLLYKSFLRVIDYFQPKA 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I++ENV +V + I + I L ++ YQV + +L + +YGV Q+R RV+ + Y
Sbjct: 117 IVMENVPNMVSMAQGRIREQILTDLERLGYQVQYKILLASDYGVPQNRRRVIFVGVPKNY 176
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
+ +FP G+ NK IT A++DLP S + +
Sbjct: 177 EF-NFPI-------------GDFTENK--------ITCSQAMNDLPEESM-TDGEPYPIN 213
Query: 361 PKTHFQRMMKDGS 373
P + +Q++M+ GS
Sbjct: 214 PLSSYQKLMRIGS 226
>gi|336273254|ref|XP_003351382.1| hypothetical protein SMAC_03688 [Sordaria macrospora k-hell]
gi|380092903|emb|CCC09656.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1536
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
LK +DL+ G G GL + GV + W+ ++ +Y AN ++ + + +L
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVDDLL 917
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ EVD I AG PC GFS L + +++ LV +F SF D
Sbjct: 918 RLALEGKFSD---NVPRPGEVDFIAAGSPCPGFSLLTQDKKVLNQVKNQSLVASFASFVD 974
Query: 235 LFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV+G+V K ++L +F L+ M YQ + + +G QSR RV
Sbjct: 975 FYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQAQLTLGDAWAHGAPQSRERV 1034
Query: 292 VILASKPG 299
+ + PG
Sbjct: 1035 FLYFAAPG 1042
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ TT NP + + G LH ++ R TV E RAQG+ D V G D +K +GN+V
Sbjct: 1180 FPTVTTTCNPSDARMGPGLHWDEPRPYTVHEMRRAQGYLDEEVLVGRTADQWKLVGNSVS 1239
Query: 586 PPLAKAIG 593
+A AIG
Sbjct: 1240 RHMALAIG 1247
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ GL AG + V+ ++S ++ N + I D + ++
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQIR- 68
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
L ++LI GPPCQGFS + L+K +N L FL F + QP Y
Sbjct: 69 -------ELIGDRHINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLQPDY 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG- 299
II+ENVTGL+ L I CL + Y V VL + +YGV + R R + L ++ G
Sbjct: 119 IIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFGV 178
Query: 300 ---YKLPSF 305
Y P F
Sbjct: 179 PNLYPSPQF 187
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
L RLA D TI T+ + HP ++R LT RE A Q FP +++F G + +
Sbjct: 278 LKRLARDSYSPTINTS------RTTYYHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQW 331
Query: 578 KQIGNAVPPPLAKAIGYEIIK 598
+QIGNAVPP LAKA+G + K
Sbjct: 332 RQIGNAVPPLLAKALGKAMSK 352
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
LK +DL+ G G GL + GV + W+ ++ +Y AN ++ + + +L
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVDDLL 917
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ EVD I AG PC GFS L + +++ LV +F SF D
Sbjct: 918 RLALEGKFSD---NVPRPGEVDFIAAGSPCPGFSLLTQDKKVLNQVKNQSLVASFASFVD 974
Query: 235 LFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV+G+V K ++L +F L+ M YQ + + +G QSR RV
Sbjct: 975 FYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQAQLTLGDAWAHGAPQSRERV 1034
Query: 292 VILASKPG 299
+ + PG
Sbjct: 1035 FLYFAAPG 1042
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ TT NP + + G LH ++ R TV E RAQG+ D V G D +K +GN+V
Sbjct: 1180 FPTVTTTCNPSDARMGPGLHWDEPRPYTVHEMRRAQGYLDEEVLVGRTADQWKLVGNSVS 1239
Query: 586 PPLAKAIG 593
+A AIG
Sbjct: 1240 RHMALAIG 1247
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 28/262 (10%)
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVF 227
C +K + + K + LP +VD++ GPPCQG S NR R E + KN +
Sbjct: 581 CKKAIKGFITEGYRLKKLPLP--GDVDVVCGGPPCQGVSGFNRFRNTESPLADEKNQQLE 638
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
++ +PK++++ENV ++ F + + L+ MNYQ ++ +G YG+ Q
Sbjct: 639 VYMDIVRYLKPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQARMGMMAAGAYGLPQF 698
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLF---TINGNLVA----NKTSHAPYRSITVRD 340
R RV + ++P LP +P P H ++ GN VA KT A +S+ + D
Sbjct: 699 RMRVFLWGARPTEILPQYPLPTHDVISRGVIPTQFEGNAVAYDEGQKTQLA--KSLFLED 756
Query: 341 AISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEM 400
AISDLP L + KD S L+++L DH L+P
Sbjct: 757 AISDLP-------AKLINILFDADLMGTSKDNS--------LQKVLYDHRPLQLNPDDYA 801
Query: 401 RIRLIPSFPNADWRDLPNICVK 422
R+ +P A +RD P + V+
Sbjct: 802 RVCEVPKRKGACFRDFPGVRVR 823
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
RL WDE+ T+VT P N+ I+HPEQDRVLT+RE AR QGFPD Y G + + Y
Sbjct: 862 FARLWWDETVPTVVTRAEPHNQA--IMHPEQDRVLTIRENARLQGFPDFYRLSGPVKERY 919
Query: 578 KQIGNAVPPPLAKAIGYEI 596
Q+GNAV P+A+A+GY +
Sbjct: 920 MQVGNAVAVPVARALGYAL 938
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL--KNGLVFTFLSFCDLFQPKYIILENV 246
LP +VD++ GPPCQG S NR R E +N + F+ +PK++++ENV
Sbjct: 547 LPLPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENV 606
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ F + + + L+ M YQ ++ +G+YG+ Q R RV + + P LP+FP
Sbjct: 607 VDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPAFP 666
Query: 307 QPLHAF---SNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL-----FH 358
P H N + N+V + +++ + D+ISDLP V NC +
Sbjct: 667 LPSHDAIYKGNVPNQFSRNVVKHIGERQLEKALFLGDSISDLPPVK---NCETRDEIPYR 723
Query: 359 NPPKTHFQRMMKDGSRIHDIHIN-----LRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ PKT FQ ++ + + + DH L+ R IP A++
Sbjct: 724 DGPKTEFQTRIRSARDDFTVFYGRGPRAMNSTVHDHRPLRLNDDDYQRACRIPKRKGANF 783
Query: 414 RDLPNICVK 422
RDL + +K
Sbjct: 784 RDLGGLKIK 792
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
R+ WDE+ T++T P N ++LHP QDRVLTVRE AR QGFPD Y G + + Y
Sbjct: 831 FARMWWDETVPTVITRAEPHNH--RMLHPTQDRVLTVRENARLQGFPDWYKLTGSVKERY 888
Query: 578 KQIGNAVPPPLAKAIGYEI 596
Q+GNAV P+A+A+GY +
Sbjct: 889 IQVGNAVAMPVARALGYSL 907
>gi|417330845|ref|ZP_12115294.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|435855464|ref|YP_007316678.1| Dcm [Klebsiella pneumoniae]
gi|353560791|gb|EHC27926.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|411343027|gb|AFW18081.1| Dcm [Klebsiella pneumoniae]
Length = 416
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 12/192 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GGL G QAG SVE++ +++ NF C I C V+ +
Sbjct: 6 AVDLFAGAGGLSLGFEQAGF-DIMASVEIDPIHCSAHKYNFPMCKTI---CRSVVDVTGE 61
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ G+ + E+D+++ G PCQGFS + + R L+ + N LV+ ++ +PK
Sbjct: 62 YVREVSGIG---EKEIDVVIGGAPCQGFSLIGK-RALDDDR--NKLVYHYVRLVLELKPK 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASK 297
Y + ENV GL + L I Y V D VL + +YGV Q R R+ ++ +
Sbjct: 116 YFVFENVKGLTVGKHKQFLVEIMDAFKDGGYDVVSDYKVLNAADYGVPQDRRRLFLMGGR 175
Query: 298 PGYKLPSFPQPL 309
G LPS+P+PL
Sbjct: 176 KGIALPSYPEPL 187
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR +PD + F ++Q+GN+VPP LA++
Sbjct: 304 TSPRPI-------HPIYPRVITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPMLARS 356
Query: 592 IGYEIIKCIG 601
+G +I+K +G
Sbjct: 357 VGLQIMKVLG 366
>gi|452981219|gb|EME80979.1| hypothetical protein MYCFIDRAFT_114349, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 923
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 21/254 (8%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-CSVIQDDCN 171
P + LK L +F G G GL + G + +V+ SY AN E +
Sbjct: 517 PSNRKLKGLGIFCGGGTFDRGLQEGGAVQFTHAVDYAEHALHSYKANSSEPVKFFLGSVD 576
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
L + + + H + E+DLI AG PCQGFS+L R+ +S+ +V + +S
Sbjct: 577 DYLSNAMAAESVHNTAT---TGEIDLISAGSPCQGFSKLQHDRDSPRSRKNASMVASVVS 633
Query: 232 FCDLFQPKYIILENVTGLVHFNKNE--------ILQCIFHCLLKMNYQVTFDVLQSGNYG 283
F D + P+Y+ILENV + +++ + + L+ + YQV ++ S +YG
Sbjct: 634 FVDFYVPEYLILENVVTMTDHPRDKKGPIPEQNVFSQVISALVGLGYQVQQFLMDSWSYG 693
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAF-SNQLFTINGNLVANKTSHAPYRS------- 335
Q R+RV I+A+ P S P+ HA + L T N +N R+
Sbjct: 694 SPQQRSRVFIVATAPSAVPLSQPEITHAHPTKNLRTRNLGRSSNGLPFGTRRTNPFVALP 753
Query: 336 -ITVRDAISDLPRV 348
+T +++DLP V
Sbjct: 754 FVTAEQSVADLPTV 767
>gi|428770795|ref|YP_007162585.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685074|gb|AFZ54541.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 412
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSGCGG+ GL +G +VE + A + NF I D N + LK
Sbjct: 6 VIDLFSGCGGMSLGLEASGF-DVAVAVEFDAIHALIHHLNFPYTHTICQDINHLNTDYLK 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G Q KG+ EVDLI GPPCQGFS + + R+L+ +N LVF ++ QPK
Sbjct: 65 GILQAKGID-----EVDLIAGGPPCQGFSLMGK-RQLDDP--RNSLVFQYVRVIRDLQPK 116
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y + ENV G+ + + L+ + + + Y + +L + +G Q R R++++ S+
Sbjct: 117 YFVFENVPGIAVGSHKQFLEELINEFESLGYHIAKPIKILDASLFGAPQKRKRLILMGSR 176
Query: 298 PGYKLPSFPQPLHAFSNQLFTIN 320
+ ++P +++ TIN
Sbjct: 177 HDMQPVNYPLETKEYNDVENTIN 199
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+H Q R +TVRE R FPD ++F I +++IGNAV P LAK IG EIIK +
Sbjct: 307 IHYNQPRCITVREAGRLHTFPDWFLFHETIWHGFREIGNAVIPMLAKGIGDEIIKVL 363
>gi|334116652|ref|ZP_08490744.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333461472|gb|EGK90077.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 397
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 14/189 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ +GL QAG +P SVE+ +A++ NF +C + DD +K
Sbjct: 63 VDLFCGAGGMTQGLLQAGF-RPVASVEINAIASATHTKNFPDCHHLCDD--------IKN 113
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
K ++ EV ++V GPPCQGFS A + + + +N L F+ +P Y
Sbjct: 114 LNPQKLLAEIGSPEVHVVVGGPPCQGFSV---AGKRDPNDPRNRLFREFVRVVSEIRPWY 170
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV G++ K + Q I ++ Y ++ VL+S YGV Q R R + +A++ G
Sbjct: 171 VVMENVPGILTIQKGAVKQAICEAFREIGYPHMSVAVLESATYGVPQIRPRAIFIANRFG 230
Query: 300 YKLPSFPQP 308
+ P +P+P
Sbjct: 231 MQNP-YPKP 238
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IG+ +I
Sbjct: 311 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGSMKKAMWQIGNAVPPRLAECIGFALI 370
>gi|443326789|ref|ZP_21055431.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
gi|442793582|gb|ELS03027.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
Length = 422
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSGCGG+ GL AG SVE++ + + NF I D + V L
Sbjct: 7 AIDLFSGCGGMSLGLEAAGFDIAA-SVEIDPIHSLVHHYNFPYGVTICQDISQVSCEELL 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q+KG K ++D+I GPPCQG+S + R LE + N L+F + +PK
Sbjct: 66 AAIQNKGF----KTDIDVITGGPPCQGYSYMGD-RILEDPR--NQLIFEYARIISTIRPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L + + NY + +L S YG Q R R++++ +
Sbjct: 119 YFIFENVPGIASGKHRQFLTELIKNFNQNNYSIVEPIQILDSSLYGAPQKRKRLILIGYR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
P++PQP H + L N T+R AI++L
Sbjct: 179 NDMPKPNYPQPTHGQDDNLLPFN----------------TIRSAIANL 210
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P++ LHP R +++RE AR F D + F I +++IGNAV P LAK+
Sbjct: 311 TAPRPIH----YLHP---RCISIREAARIHTFTDWFQFHRTIWHGFREIGNAVVPLLAKS 363
Query: 592 IGYEIIKCI 600
+ EIIKC+
Sbjct: 364 LATEIIKCL 372
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
Length = 355
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFDALIGLDCDKQALITFENNHKNAIGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
Length = 365
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 161/384 (41%), Gaps = 67/384 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL +G QAG V+ + +Y N ++ ++ D ++
Sbjct: 6 VVDLFSGAGGLSQGFKQAGF-NILMGVDFDDPALKTYKHNLKDSVALKADLFDEESAIKD 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G +++D+I+AGPPCQGFS L +R++ S +N L + F+PK
Sbjct: 65 IENNLNG------NKIDVIIAGPPCQGFS-LTGSRDINDS--RNKLYVAVVHAVKHFKPK 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNY--QVTFDVLQSGNYGVAQSRNRVVILASK 297
++ENV G+ K ++ + I + + Y VT L + +YGV Q R R+ + +
Sbjct: 116 AFLIENVPGMATLYKGKVKEQIINTFEDLGYAVSVTDKPLLAADYGVPQIRKRMFFVGYR 175
Query: 298 P--GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GAN 353
Y+ FP+P + P + I DAISDLP + G
Sbjct: 176 KDLNYEYFKFPEP--------------------TLTPDKHIGTADAISDLPALVDELGEE 215
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+H P++ +QR+M+ S + HI R D + ++S + E +
Sbjct: 216 NVPYHMEPQSEYQRLMRKNSLVIHNHIGTRH--TDEVKWVISQVPE----------GGNH 263
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI-IPWSLVHTAS 472
+DLP + ++T +Y+++K D G +N W+ V T
Sbjct: 264 KDLPPGVGDSRKFNEAWT---RYHSQKPSKTIDT---------GHRNHFHYKWNRVPTVR 311
Query: 473 RNNNWQGVLGRLAWDESFDMTGQK 496
N Q ++ + F+ G K
Sbjct: 312 ENARLQ------SFPDDFEFLGTK 329
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
H + +RV TVRE AR Q FPD + F G Y+Q+GNAVPP LA+AI E++
Sbjct: 300 FHYKWNRVPTVRENARLQSFPDDFEFLGTKTQQYRQVGNAVPPLLAQAIAEEML 353
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 282
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 36/253 (14%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LDLFSGCGGL G QAG + ++ + A++ N I D + S
Sbjct: 10 LDLFSGCGGLSYGFQQAGF-EVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSS---- 64
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+S +D+IV GPPCQGFS ++ R + + N L +FL D FQPK
Sbjct: 65 -----KISQQINKSIDVIVGGPPCQGFS-ISGKRNPDDPR--NLLYKSFLRVIDYFQPKA 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
I++ENV +V + I + I L ++ YQV + +L + +YGV Q+R RV+ + Y
Sbjct: 117 IVMENVPNMVSMAQGRIREQILTDLGRLGYQVQYKILLASDYGVPQNRRRVIFVGVPKNY 176
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
+ +FP G+ NK IT A++DLP S + +
Sbjct: 177 EF-NFPI-------------GDFTENK--------ITCSQAMNDLPEESM-TDGEPYPIN 213
Query: 361 PKTHFQRMMKDGS 373
P + +Q++M+ GS
Sbjct: 214 PLSSYQKLMRIGS 226
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 52/297 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL G QAG + + E ++S A SY N +I D + L K
Sbjct: 5 IIDLFSGVGGLSLGFEQAGFSTIVAN-EFDKSIAYSYSKNHPFTKMIVGDITSL--ELEK 61
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q+K ++VD++V GPPCQG+SQ + + + N L F+ +L P
Sbjct: 62 EFLQYK-------NKVDVVVGGPPCQGYSQKGSRKTIHDER--NFLFKYFVKVVELVSPN 112
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
Y ++ENV L+ K Q + ++ Y ++ +++ + +GV Q R R +IL K G
Sbjct: 113 YFVMENVPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKK-G 171
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG----ANCY 355
K +F +S+T+ DAISDL + G Y
Sbjct: 172 KKSVTF-----------------------RLEEKKSVTIWDAISDLAFLESGDGEEEQNY 208
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
LF P ++++Q+ ++ S+I L +H S + R+++IP D
Sbjct: 209 LF--PAQSNYQQELRSDSKI----------LYNHKATNHSKIALERLKMIPENSGKD 253
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G R+ +E TI T TP+ GK HP +R +TVRE AR Q FPDS++F
Sbjct: 265 YSGTWERMRKNEQSVTITTRFDTPS----SGKFTHPFLNRAITVREAARLQSFPDSFIFF 320
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G KQ+GNAVPP LAK I I+K
Sbjct: 321 GPKTSQMKQVGNAVPPKLAKVIAEMILK 348
>gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 428
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 113/237 (47%), Gaps = 33/237 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV------ 173
+DLF+G GG G+ QAG +VE + AA Y NF + V+ D +
Sbjct: 10 AIDLFAGVGGFSLGIEQAGFDVAI-AVEKDPIHAAVYKFNFPQTHVLCADVTELTGTHIQ 68
Query: 174 --LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
L++ + VS + +++L+ GPPCQGFS + + + +K +N LVF F
Sbjct: 69 KALRNWCDRQKRPVRVSDRDRMDINLVFGGPPCQGFSVMGKRQVCDK---RNLLVFEFCR 125
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRN 289
QP+Y ++ENV GL ++L + Y++T VL + N+GV Q R
Sbjct: 126 LVKELQPRYFLMENVPGLGWKKYQDLLNRLQWEFNAAGYEITQPIQVLNAVNFGVPQQRQ 185
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R+ IL ++ G K ++PQP QL +P TVRDAI+DLP
Sbjct: 186 RLFILGNQVGVKPLTYPQP------QL-------------QSPSEFCTVRDAIADLP 223
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 518 LGRLAWDESFDTI----------VTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
L RL WD+ T+ T+P P+ HP RV++VRE AR FPD +
Sbjct: 309 LQRLDWDKPCYTLRAGTGYDRGSYTSPRPI-------HPNYPRVISVREAARLHSFPDWF 361
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPP 607
F G ++Q+GN+VPP L + +G +II +G PP
Sbjct: 362 RFHGTKWHGFRQVGNSVPPRLGRVLGDQIIAALGVEPSPP 401
>gi|452854838|ref|YP_007496521.1| Modification methylase Sau96I / Site-specific DNA methylase
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079098|emb|CCP20851.1| Modification methylase Sau96I / Site-specific DNA methylase
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 452
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P K L++F+G GGLM GL +AG ++EL R AS N +VI+ D ++K
Sbjct: 95 PYKVLEVFAGAGGLMLGLEKAGFDTAA-ALELNRHACASLRTNRPNVNVIEGDIADIVKE 153
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++ + + E+D++ G PCQ FS R L+ ++ + + + +
Sbjct: 154 GIRNYIGDE--------EIDVLSGGYPCQAFSFAGRKLGLKDAR--GTMFYWYAQLLNEL 203
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK + ENV GLV K + LQ + ++ Y VTF VL++ NY VAQ R R+ I+
Sbjct: 204 RPKMFLAENVRGLVSHEKGKTLQGMMDVFDEIGYNVTFKVLKATNYNVAQKRERIFIIGV 263
Query: 297 KPGYKLP-SFPQP 308
+ + FP P
Sbjct: 264 RKDLEAEFRFPAP 276
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G+ R++WDE T+ T P+ KQ + HPE+ R TVREYAR Q FPDS+ F G + +
Sbjct: 339 GIARRISWDEPCLTLTTAPD--MKQTERCHPEETRPFTVREYARIQSFPDSWAFEGSMGE 396
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
YKQIGNAVP LA+ +G +I + V P
Sbjct: 397 QYKQIGNAVPVELARHVGLAMIHTLNEIVAP 427
>gi|409992167|ref|ZP_11275373.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis]
gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
gi|409936970|gb|EKN78428.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
Length = 411
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + NF C I D + V + +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DVAVAVEFDAVHCLVHHFNFPYCHTICGDISQVKSAEIL 65
Query: 180 GHTQHKGVSLPQKH-EVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
Q L H EVDLI GPPCQGFS + + R+L+ +N LVF +L QP
Sbjct: 66 DQLQ-----LKYGHTEVDLIAGGPPCQGFSHIGK-RQLDDP--RNSLVFEYLRMIAEIQP 117
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILAS 296
KY I ENV G+ L I + YQV +L + YG Q R R++++ S
Sbjct: 118 KYFIFENVPGIATGKHKRFLDEIITEFEGIGYQVKKPIKILDASEYGAPQKRKRLILIGS 177
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ K+ +P T N +V TV AISDL ++ N
Sbjct: 178 RFDVKMAEYPA----------TNNSEIV------------TVYQAISDLEKIDHFTN 212
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +T+RE AR FPD + F I +++IGNAV P LAK
Sbjct: 305 TAPRPI-------HYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQ 357
Query: 592 IGYEIIKCIG 601
+G +I +G
Sbjct: 358 LGGSVIDALG 367
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 357
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 45/299 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF GCGGL +G +AG K V++E++ +++ N + D L
Sbjct: 10 IDLFCGCGGLSKGFEEAGY-KTLLGVDIEQNALNTFEKNHNGAVGLNLD-------LSAS 61
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ K + + +D+I+ GPPCQGFS L R E + N L + +QPK
Sbjct: 62 ESFDKIDEVVKGRAIDVIIGGPPCQGFS-LTGPRNFEDKR--NKLYLAMIETVHRYQPKA 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
++ENV G+ + K + I M Y V+ ++ + +YGV Q R R+V + K
Sbjct: 119 FLIENVPGMANLYKGAVKDEIIRRFTAMGYNVSCQIVCAADYGVPQIRKRLVFVGLKNNK 178
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCYLFH 358
+ FP+PL Y IT + AISDLP + G+ +
Sbjct: 179 EKFEFPEPL------------------LKEEAY--ITCKQAISDLPPLVDELGSEVSTYC 218
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P+T +QR M+ ++L +H+ ++ I +P +++DLP
Sbjct: 219 EEPETEYQRKMRKNC----------DVLYNHVAVNHKDFVKQVISQVPD--GGNYKDLP 265
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +R TVRE AR Q FPD +VF G KQ+GNAVP LA A+ +I+K + N
Sbjct: 298 FHYKWNRCPTVRESARLQSFPDDFVFTGNKTQQNKQVGNAVPVLLAYALAKQILKYLDN 356
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 32/264 (12%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ LK +DLFSG GG G G +SV++E S +Y+ NF ++I D V
Sbjct: 1 MSRSLKYIDLFSGAGGFSLGFDNKGFQN-VFSVDIEPSFCETYNHNFPSHNLIHKDICDV 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+ LK L + E+D+++ GPPCQGFS +N L F+
Sbjct: 60 KDAELK--------YLKEYDEIDVVIGGPPCQGFSIAGNIGRKFIDDPRNKLFKEFVRVV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ +P Y ++ENV L + NK + I + + Y+V +L S +YGV Q R RV+
Sbjct: 112 KVVEPTYFVMENVARLYNHNKGNTRKEIINDFENLGYKVECKILNSADYGVPQVRKRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ +K K+ FP+ + +TV++A+S P++ G
Sbjct: 172 IGTKNSQKI-LFPK----------------------KEVDKYVTVKEALSSYPKLKSGQE 208
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHD 377
+ ++ +H ++M+ S + D
Sbjct: 209 SKIPNHIAMSHSEQMLHKMSFVSD 232
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
KI H EQ+R LTVRE A+ Q FPD + F+G +Q+GN+VPP +A+AI IIK
Sbjct: 271 KIFHYEQNRALTVRELAKLQSFPDDFEFKGSKISQQQQVGNSVPPRMAEAIASVIIKMSE 330
Query: 602 NA 603
N
Sbjct: 331 NV 332
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 390
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
M T +DLFSG GG+ GL AG + V+ ++S ++ N + I D
Sbjct: 1 MTTSTTKTFIDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLR 59
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+ ++ L ++LI GPPCQGFS + L+K +N L FL
Sbjct: 60 EISTEQIR--------ELIGDRHINLICGGPPCQGFSTIGTNNNLDK---RNFLFLEFLR 108
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
F + +P YII+ENVTGL+ L I CL + Y V VL + +YGV + R R
Sbjct: 109 FVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRT 168
Query: 292 VILASKPG----YKLPSF 305
+ L ++ G Y P F
Sbjct: 169 IFLGNRFGVPNLYPSPQF 186
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
L RLA D TI T+ + HP ++R LT RE A Q FP +++F G + +
Sbjct: 277 LKRLARDSYSPTINTS------RTTYYHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQW 330
Query: 578 KQIGNAVPPPLAKAIGYEIIK 598
+QIGNAVPP LAKA+G I+K
Sbjct: 331 RQIGNAVPPLLAKALGEAILK 351
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
Length = 384
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ GL QAG + ++ +++ ++ AN ++I D L+
Sbjct: 6 IDLFSGAGGMSCGLEQAGF-ECILGIDQDKASLETFQANHHHANIICGD--------LRE 56
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
T VDLI GPPCQGFS + +K +N L F FL F+P Y
Sbjct: 57 ITLEDIYEQIDNQTVDLICGGPPCQGFSTIGANDNRDK---RNFLFFEFLRIVTAFKPDY 113
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
+I+ENVTGL+ N L I + ++ Y + VL + +YGV Q+R R + L ++ G
Sbjct: 114 LIMENVTGLLSRNNEPTLSLILNSFAELGYTIEVRVLAAHHYGVPQARRRTIFLGNRFGV 173
Query: 301 K 301
+
Sbjct: 174 Q 174
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 545 HPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
HP + R LTVRE A Q FP ++F+G + ++QIGNAVPP AKAIG I+
Sbjct: 294 HPTEHRYLTVREAAAIQSFPPEFIFKGSLTQQWRQIGNAVPPLFAKAIGEGIL 346
>gi|449106429|ref|ZP_21743095.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|449117489|ref|ZP_21753906.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|451968138|ref|ZP_21921367.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
gi|448950690|gb|EMB31511.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|448964942|gb|EMB45608.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|451703095|gb|EMD57477.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
Length = 413
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 37/245 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE----------CSVIQDD 169
+DLF+GCGGL GL +G + +++E + + AN + D
Sbjct: 9 VIDLFAGCGGLSLGLYLSG-WQGVFAIEKNKFAFETLKANLIQNKQHFNWPKWLPQTPHD 67
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N +LK+ + +G ++DL+V GPPCQGFS A + K ++N LVF++
Sbjct: 68 INEILKNYKNQLNEFRG-------KIDLVVGGPPCQGFST---AGKRVKEDVRNNLVFSY 117
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQC-------IFHCLLKMNYQVTFDVLQSGNY 282
+ F L +PK I+ ENV G + + +I + + L+ +NY++ ++ Y
Sbjct: 118 IEFIKLIEPKMILFENVKGFTYAFEKKIDEASIPYSKKVIDALIDLNYKIEAYIIDFSEY 177
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAI 342
G+ Q RNR +++ SK S + L F + + AN ITV++AI
Sbjct: 178 GIPQRRNRFILIGSKAIKNTQSNFKELLESKKSEFLLKKGIPAN---------ITVKEAI 228
Query: 343 SDLPR 347
SDL R
Sbjct: 229 SDLLR 233
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFR-----GGICD-----MYKQIGNAVPPPLAKAIG 593
LH + R++TVRE AR Q FPD Y + GG Y QIGNA+PP A+ G
Sbjct: 338 LHYSEPRIMTVRECARIQSFPDWYEIKEKYTTGGSMRKIEVPRYSQIGNAIPPLFAELAG 397
>gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum]
Length = 398
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 123/271 (45%), Gaps = 53/271 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN----FQECSVIQDDCNLV 173
++ + FSG GG+ G AG + WS + ++ +Y+ N ++ SV+ D L+
Sbjct: 26 MRVISFFSGAGGMDLGFTLAG-HEIVWSNDFDKDAVQTYNENIGKYWKHESVLGDITKLL 84
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
K + +P + D+++ G PCQGFS N R +E K N L L
Sbjct: 85 SKPF-----EEIDKIIP---DGDVVIGGFPCQGFSIANVNRSMEDEK--NYLYLELLKVI 134
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKM---NYQVTFDVLQSGNYGVAQSRNR 290
+ PK+ +LENV GL + K E+L I L K Y V +DVL + N+GV Q+R R
Sbjct: 135 HVKNPKFFVLENVKGLENMEKGEVLNVILDDLEKAGKCGYTVCYDVLNAYNFGVPQNRER 194
Query: 291 VVILA------------SKPGYKLPS---FPQPLHAFSNQL---------------FTIN 320
V+I+ KP K F +P H+ +++L N
Sbjct: 195 VIIVGIRNDLRDRYIIPQKPAVKNKRKTLFVKPTHSKTSKLGEELKPWQKINYLYNLWTN 254
Query: 321 GNLVANKT-----SHAPYRSITVRDAISDLP 346
G L +NK + Y+ T+RDAISDLP
Sbjct: 255 GKLDSNKNYLVNENDETYKLATLRDAISDLP 285
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
+WD+ TI+ + I HP Q R L+VRE AR Q FPD ++F+G Y+QIG
Sbjct: 317 SWDKYAPTIMGRGSGTGGPLIIPHPLQHRRLSVREVARIQTFPDKFLFKGNNSACYRQIG 376
Query: 582 NAVPPPLAKAIGYEIIKCI 600
NAVP +A Y I K I
Sbjct: 377 NAVPVLMA----YHIAKLI 391
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 47/303 (15%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ +DLFSGCGG+ EG AG ++ ++ NF I D + +
Sbjct: 4 RVIDLFSGCGGISEGFRLAGF-DILGGLDFNPDAVETFHQNFLNSRAICADIQEIKNDEI 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
G ++D+IV GPPCQGFS NR ++ E + +N L + ++ F ++F P
Sbjct: 63 TYMFDLTG-------DIDVIVGGPPCQGFSSANRWQK-EMADPRNKLFYEYIRFVEVFMP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K +++ENV G++ + + I+ L + Y V VL + +GV Q R R +A++
Sbjct: 115 KVVLIENVRGILTRDNGYARKKIYSILENLGYIVDSAVLDASEFGVPQKRLRAFFIATR- 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL----PRVSQGANC 354
PQ + +K P + V+DA+ +L ++ + +
Sbjct: 174 ----KDIPQ---------------ITFDKLKKKPI--VLVKDALGELYELEEQMGKNRSN 212
Query: 355 YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
Y + P + +++ ++ N + +++H + + + + RI +P +WR
Sbjct: 213 YFLSSKPDSSYRKYLR----------NSKNSIENHEIRYPAKIQQDRIACVPQ--GGNWR 260
Query: 415 DLP 417
D+P
Sbjct: 261 DIP 263
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
+R N RL ++ TI T N H R+ TVRE AR Q F D ++
Sbjct: 270 NRKNRHSSAYKRLDEEDVSVTIDTG----NAHSNYFHTIFHRIPTVREAARLQSFNDDFI 325
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
F G Y+Q+GNAVPP LAKA+ I + + N
Sbjct: 326 FYGSRTSQYRQVGNAVPPLLAKAVAVAIKEGLTN 359
>gi|409993543|ref|ZP_11276681.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
gi|409935626|gb|EKN77152.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
Length = 390
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
M T +DLFSG GG+ GL AG + V+ ++S ++ N + I D
Sbjct: 1 MTTSTTKTFIDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLR 59
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+ ++ L ++LI GPPCQGFS + L+K +N L FL
Sbjct: 60 EISTEQIR--------ELIGDRHINLICGGPPCQGFSTIGTNNNLDK---RNFLFLEFLR 108
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
F + +P YII+ENVTGL+ L I CL + Y V VL + +YGV + R R
Sbjct: 109 FVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRT 168
Query: 292 VILASKPG----YKLPSF 305
+ L ++ G Y P F
Sbjct: 169 IFLGNRFGVPNLYPSPQF 186
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
LGR ++ + +T TT HP ++R LT RE A Q FP +++F G + +
Sbjct: 280 LGRDSYSPTINTSRTT---------YYHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQW 330
Query: 578 KQIGNAVPPPLAKAIGYEIIK 598
+QIGNAVPP LAKA+G I+K
Sbjct: 331 RQIGNAVPPLLAKALGEAILK 351
>gi|392397895|ref|YP_006434496.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528973|gb|AFM04703.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 332
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 32/264 (12%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ T LK +DLFSG GG G G + +S+++E S +Y NF +++ D +
Sbjct: 1 MKTTLKYIDLFSGAGGFSLGFDNKGF-QNVFSIDIEPSFCETYKHNFANHQLVEKDICDL 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
S +K L + E+D+++ GPPCQGFS +N L F+
Sbjct: 60 SDSEIK--------YLKEFDEIDVVIGGPPCQGFSIAGNIGRKFVDDPRNRLFKEFVRIV 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ +PK+ ++ENV L NK I K+ Y+V +L S +YGV Q R RV+
Sbjct: 112 KVVKPKFFVMENVARLYTHNKGATRNEIIKDFEKLGYKVDCKILNSADYGVPQVRKRVIF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + K+ FPQ V N ++V++A+S P++ G
Sbjct: 172 IGTSTNQKI-EFPQ--------------QEVEN--------YVSVKEALSKYPKLKSGEE 208
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHD 377
+ ++ +H ++M+ S + D
Sbjct: 209 SSIPNHIAMSHSEQMLTKMSYVSD 232
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
KI H EQ+R LTVRE A Q FPD +VF+G +Q+GN+VPP +A+AI IIK
Sbjct: 271 KIFHYEQNRALTVRELAELQSFPDDFVFKGTRISQQQQVGNSVPPKMAEAIAKVIIKMSE 330
Query: 602 NA 603
N
Sbjct: 331 NV 332
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HP+ R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPKLHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|418075690|ref|ZP_12712931.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47502]
gi|419494872|ref|ZP_14034592.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47461]
gi|421233592|ref|ZP_15690214.1| modification methylase HgiDII [Streptococcus pneumoniae 2061617]
gi|421235748|ref|ZP_15692349.1| modification methylase HgiDII [Streptococcus pneumoniae 2071004]
gi|421248892|ref|ZP_15705355.1| modification methylase HgiDII [Streptococcus pneumoniae 2082239]
gi|421302389|ref|ZP_15753054.1| cytosine methyl transferase [Streptococcus pneumoniae GA17484]
gi|353750840|gb|EHD31476.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47502]
gi|379597236|gb|EHZ62039.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47461]
gi|395602489|gb|EJG62631.1| modification methylase HgiDII [Streptococcus pneumoniae 2061617]
gi|395604667|gb|EJG64799.1| modification methylase HgiDII [Streptococcus pneumoniae 2071004]
gi|395615521|gb|EJG75537.1| modification methylase HgiDII [Streptococcus pneumoniae 2082239]
gi|395903203|gb|EJH14135.1| cytosine methyl transferase [Streptococcus pneumoniae GA17484]
Length = 363
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV----LK 175
+DLFSG GG GL ++G+ +VE++ +Y N E SVI D N+V +K
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
LK T K ++VA PPCQGFS + E ++ +N LVF FL +
Sbjct: 65 EYLKIDTDDKL----------MLVACPPCQGFSTIGTNNENDE---RNQLVFQFLRLINE 111
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P ++++ENV G+ +NE + F + NY V +D+L + +YGV QSR R+V+
Sbjct: 112 LNPDFLLMENVVGMTR-TRNEKIFKKFLTSIDNNYSVIYDILNTADYGVPQSRKRLVL 168
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+G+ HP Q+R L+ RE AR Q F D Y+F G + KQIGNAVP LA+A G
Sbjct: 293 KGRFGHPTQNRALSAREAARLQSFDDDYIFVGNRGQLAKQIGNAVPVKLAQASG 346
>gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R]
Length = 431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG GG G QAG +++ A ++ + I D V +
Sbjct: 67 LILVDLFSGAGGFSVGFEQAGFVS-ALGLDIYTVAAKTFMEHHPRAGFILGDARAVTPEM 125
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L + ++ + H ++ G PCQ FS NR R E + N L F+
Sbjct: 126 LL-----EALNGLRPH---VVTGGVPCQRFSLTNRKRNDEDPR--NYLFREFIRLARFLD 175
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P +I+ENV+G+ + + I + + Y+ +VL + ++GV Q R R+ + +
Sbjct: 176 PDVLIVENVSGIRSAANGKFVLEIVRAMEEAGYRAHVEVLNAADFGVPQHRKRIFFVGVR 235
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
PG + +P+P H P+ ++V +AI DLP + G + + +
Sbjct: 236 PGIEF-RWPRPTHG---------------PLGEHPW--VSVWEAIGDLPPLGPGESAHEY 277
Query: 358 HNPPKTHFQRMMKDGS 373
H PP+T +QR M++G+
Sbjct: 278 HLPPQTDYQRRMREGA 293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL D TIV + Q + HP Q R LTVRE AR Q FPD F GGI Q
Sbjct: 330 RLHPDRPSPTIVA--GGIRPQFQFGHPTQPRGLTVRELARLQSFPDVVYFHGGIVQGRVQ 387
Query: 580 IGNAVPP 586
GNAVPP
Sbjct: 388 TGNAVPP 394
>gi|90425781|ref|YP_534151.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18]
gi|90107795|gb|ABD89832.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18]
Length = 374
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 131/300 (43%), Gaps = 53/300 (17%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLFSG G L GL AG + +VE+E+ A+Y AN E + D V
Sbjct: 16 LVAIDLFSGGGALTLGLKTAGF-RVVSAVEVEQHAFATYKANHPEVFAYKQDVRTVDGQS 74
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L H + ++DL+ PPCQGF+ L + + +N LV +
Sbjct: 75 LSMHAPRR--------KIDLLAGCPPCQGFTSLTS--KWRRQDPRNNLVREMSRLVQEIR 124
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ +++ENV L + ++L L K Y+V +DVLQ +YG Q+R R+V+LA +
Sbjct: 125 PRAVMMENVPRLASTGR-DLLDGFIVDLKKAGYRVAWDVLQVADYGTPQARKRLVLLAGR 183
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G+ + P H+ S F + P++ TVRD I LP
Sbjct: 184 -GFDI-DLPPATHS-STSGFDL-----------PPWK--TVRDTIGGLP----------- 216
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
PP G+R+ D H+ + LSP + RI+ + P A W+ +P
Sbjct: 217 --PPSDFVDVRHTMGNRVADW----------HVVRKLSPENQKRIKR--AKPGASWQSIP 262
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 502 WSLVHTASRNNNWQG-------VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
W + A R N +G V GR++WDE TI +K G+ HPE R +++
Sbjct: 258 WQSIPEALRPNCHRGGYVGFGNVYGRMSWDEVSPTITAGCATFSK-GRFGHPEAHRTISI 316
Query: 555 REYARAQGFPDSYVFRGGICDMY-KQIGNAVPPPLAKAIGYEIIKCI 600
RE A Q PD Y+ D IGNA+P A + + I
Sbjct: 317 REAALLQEIPDYYLIDTPHIDQACSIIGNALPCGFAAVMARHAAQTI 363
>gi|428314437|ref|YP_007125413.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428256049|gb|AFZ22007.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 399
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 148/329 (44%), Gaps = 47/329 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV--LK 175
L+ LDLF G GGL GL + G+ +P W+++ A Y N + V+ D + L+
Sbjct: 3 LRALDLFCGMGGLSWGLKETGLIEPLWAIDNHEPALALYRRNLPDTYVLNIDLSKSANLR 62
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
L++ + G VDL+V G PC+GF+Q+ ++ S N L F
Sbjct: 63 DLIEKIRLNGG--------VDLVVGGSPCRGFTQIRNGQDTH-SDPNNRLAIKFAEIVRE 113
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLL-KMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
P I ENV L K+ + + L + NY+V VL++ N+G R R++++
Sbjct: 114 LSPLAFIYENVPQL---EKSRVFKRFIGRLKGRNNYRVAHAVLEAANFGNPSRRARLIVV 170
Query: 295 ASKPGY-KLPSFPQ----PLHAFSNQLFTINGNLVANKTSHAPYRS----------ITVR 339
+ + +LP P+ P F + +G + P+RS + V
Sbjct: 171 GIRWDFGRLPIIPKGVDIPHQQFWLRRVEQDGKIGYCSKLQEPWRSCLLDPDDCRLVNVE 230
Query: 340 DAISDLPRV---SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSP 396
AI+DLP + ++G+N + PP++ +QR + ++ D H+ R + P
Sbjct: 231 QAIADLPILEGKTKGSNRS-YGVPPQSAYQRWARQYTQETDGHVVPR----------VRP 279
Query: 397 LMEMRIRLIPSFPNADWRDLPN-ICVKLP 424
E R RL P +WRDLP + ++P
Sbjct: 280 --ETRERLKAIVPGGNWRDLPTPLTYRIP 306
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 545 HPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
H + +R LT RE AR GF D++ + + IGNAVPPPL+KAI +++
Sbjct: 343 HYKYERALTPRELARLMGFTDNFQLGHEYDSVVQAIGNAVPPPLSKAIAESLLE 396
>gi|423066558|ref|ZP_17055348.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406711866|gb|EKD07064.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 605
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ GL AG + V+ ++S ++ N + I D + ++
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQIR- 68
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
L ++LI GPPCQGFS + L+K +N L FL F + +P Y
Sbjct: 69 -------ELIGDRHINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLKPDY 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG- 299
II+ENVTGL+ L I CL + Y V VL + +YGV + R R + L ++ G
Sbjct: 119 IIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFGV 178
Query: 300 ---YKLPSF 305
Y P F
Sbjct: 179 PNLYPSPQF 187
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
L RLA D TI T+ + HP ++R LT RE A Q FP +++F G + +
Sbjct: 278 LKRLARDSYSPTINTS------RTTYYHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQW 331
Query: 578 KQIGNAVPPPLAKAIGYEIIK 598
+QIGNAVPP LAKA+G I+K
Sbjct: 332 RQIGNAVPPLLAKALGEAILK 352
>gi|422855124|ref|ZP_16901782.1| modification methylase DdeI [Streptococcus sanguinis SK1]
gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1]
Length = 351
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLL 178
+DLFSG GGL G AG ++ + ++ N + V+ D N+ + +
Sbjct: 6 IIDLFSGAGGLSYGFEAAGF-NVLLGIDNDEKALETFRKNHKNSKVLCGDITNISYEEDI 64
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K + + +VDLIV GPPCQG S L+ R+ + + N L +++ QP
Sbjct: 65 K--------PIIGEQKVDLIVGGPPCQGMS-LSGPRKFDDPR--NKLYLSYIRLVREIQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK- 297
++ENV G+V K I I KM Y+V F VL + +YGV Q+R RV+ + +K
Sbjct: 114 TAFVIENVIGIVSLFKGHIKDAIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTKN 173
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCY 355
G++ P+ L T +IT A+SDLP + G
Sbjct: 174 DGFEYPT----------SLGT----------------TITTEMALSDLPTLENELGDAEM 207
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
++ + PK ++Q++M+ S + + +HI S + I L+P ++++
Sbjct: 208 VYVSEPKNNYQKLMRKQSSV----------VLNHIAAKHSEKVTSTIALVPD--GGNYKN 255
Query: 416 LP 417
LP
Sbjct: 256 LP 257
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +RV TVRE AR Q FPD ++F G ++Q+GNAVPP +A+ I ++K + N
Sbjct: 290 FHYKYNRVPTVRESARLQSFPDDFIFYGSKTQQFRQVGNAVPPLMAQQIANSLLKYLKN 348
>gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
Length = 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 24/235 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL G+ AG + S+E++ +A ++ NF C+ I D + V L
Sbjct: 14 AIDLFSGAGGLSLGIESAGF-EVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEELW 72
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
K ++ EVDL+ GPPCQGFSQ+ R +E +N LVF ++ +P+
Sbjct: 73 NILNDKHIN-----EVDLLAGGPPCQGFSQMG-YRHIEDP--RNKLVFEYVRVVRDIKPR 124
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQ--VTFDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+V ++ + H +++ Y V +L + ++GVAQ+R+R+++L +
Sbjct: 125 YFIFENVPGIVCGKHKGFIEDLCHEFIQIGYNTIVPVLILNAADFGVAQNRSRLILLGWR 184
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRS---ITVRDAISDLPRVS 349
P +P+ T+ AN S P + D +SDL VS
Sbjct: 185 KDMPKPVYPE----------TLFEKTTANSKSREPSSLPPWLGASDVLSDLEGVS 229
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +++RE AR FPD + F I ++QIGN+VPP LAK
Sbjct: 327 TAPRPI-------HYSHPRCISIREAARLHSFPDWFQFHRTIWHGHRQIGNSVPPLLAKE 379
Query: 592 IGYEIIKCIG 601
I +I +G
Sbjct: 380 IAQSLIGLLG 389
>gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|418184341|ref|ZP_12820889.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|419510257|ref|ZP_14049901.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|421212588|ref|ZP_15669550.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|421214780|ref|ZP_15671711.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|353851939|gb|EHE31929.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|379633450|gb|EHZ98019.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|395580995|gb|EJG41468.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|395582339|gb|EJG42801.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
Length = 363
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 19/178 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV----LK 175
+DLFSG GG GL ++G+ +VE++ +Y N E SVI D N+V +K
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
LK T K ++VA PPCQGFS + E + +N LVF FL +
Sbjct: 65 EYLKIDTDDKL----------MLVACPPCQGFSTIGTNNENDD---RNQLVFQFLRLINE 111
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P ++++ENV G+ +NE + F + NY V +D+L + +YGV QSR R+V+
Sbjct: 112 LNPDFLLMENVVGMTR-TRNEKIFKKFLTSIDNNYSVIYDILNTADYGVPQSRKRLVL 168
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+G+ HP Q+R L+ RE AR Q F D Y+F G + KQIGNAVP LA+A G
Sbjct: 293 KGRFGHPTQNRALSAREAARLQSFDDDYIFVGNRGQLAKQIGNAVPVKLAQASG 346
>gi|428212954|ref|YP_007086098.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428001335|gb|AFY82178.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 382
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D P +DLF G GG+ +GL QAG P SVE+ +A+Y NF C+ +
Sbjct: 57 DNPYVFMDLFCGAGGMTQGLFQAGF-NPVASVEVNPIASATYQRNFPNCNHFCGEIEKFS 115
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
++ + S P V LIV GPPCQGFS A + + +N L F+
Sbjct: 116 PDVVLNQSN----SSP----VHLIVGGPPCQGFSV---AGKRNPNHPRNRLFQEFIRVVS 164
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVI 293
+P Y+++ENV G++ K I Q I L + Y V+ +L+S +YGV Q R R +
Sbjct: 165 QVRPWYVVIENVPGILTLQKGAIKQAICEALEAIGYSHVSIAILESADYGVPQIRPRAIF 224
Query: 294 LASKPGYKLPSFPQP 308
+A++ G P +P+P
Sbjct: 225 IANRFGMDNP-YPKP 238
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 311 NHGGTHIHPYLNRVISAREMARLQSFPDSFIFEGSMKKAMWQIGNAVPPRLAECIGYALI 370
Query: 598 KCI 600
+
Sbjct: 371 PAL 373
>gi|419529667|ref|ZP_14069199.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
gi|379575136|gb|EHZ40071.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
Length = 363
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 19/178 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV----LK 175
+DLFSG GG GL ++G+ +VE++ +Y N E SVI D N+V +K
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
LK T K ++VA PPCQGFS + E + +N LVF FL +
Sbjct: 65 EYLKIDTDDKL----------MLVACPPCQGFSTIGTNNENDD---RNQLVFQFLRLINE 111
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P ++++ENV G+ +NE + F + NY V +D+L + +YGV QSR R+V+
Sbjct: 112 LNPDFLLMENVVGMTR-TRNEKIFKKFLTSIDNNYSVIYDILNTADYGVPQSRKRLVL 168
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+G+ HP Q+R L+ RE AR Q F D Y+F G + KQIGNAVP LA+A G
Sbjct: 293 KGRFGHPTQNRALSAREAARLQSFDDDYIFVGNRGQLAKQIGNAVPVKLAQASG 346
>gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
Length = 431
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GGL GL QAG + SVE + AA ++ NF D + V ++
Sbjct: 10 AVDLFAGAGGLSLGLEQAGF-EIAASVEYDPIHAAVHEFNFPYGKTFASDVSKVTGEQIR 68
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
++ E+ L+ GPPCQG S + R R ++ + N L+ F+ +P+
Sbjct: 69 RESEIG------DREIHLVAGGPPCQGISMIGR-RAIDDPR--NALLKEFVRLVLELKPR 119
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMN-YQVT--FDVLQSGNYGVAQSRNRVVILAS 296
Y ++ENV GL+ +++ + + + Y+V VLQ+ ++G QSR RV+++ S
Sbjct: 120 YFVMENVAGLMVGKHRQLVDEVVEMVEADDEYRVVTPIKVLQAADFGTPQSRKRVIVMGS 179
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
+ LP +P HA TI G + T +V DAI DLP Q
Sbjct: 180 RKDVTLPEYPSVTHAPR----TIKGGQPSKGTLPT---GPSVFDAIGDLPDPDQ 226
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ HP RV+TVRE AR G+PD + F + +++IGN+VP L +A
Sbjct: 326 TAPRPI-------HPALPRVITVREAARLHGYPDWFRFHVTKWNGFREIGNSVPAHLGRA 378
Query: 592 IGYEIIKCIG 601
+G EI+ G
Sbjct: 379 VGREILSADG 388
>gi|121594541|ref|YP_986437.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
gi|120606621|gb|ABM42361.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
Length = 366
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 172/486 (35%), Gaps = 155/486 (31%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
T + C+DLF G GGL G G+ ++L+ + Y+AN Q ++ D + V
Sbjct: 21 TTISCVDLFCGAGGLTHGFVLEGLPVVA-GIDLDPACRFPYEANNQ-ARFVERDISKVTA 78
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
S LK +L ++ ++ PCQ FS + EL+ K GL++ F
Sbjct: 79 SELK--------ALFGDADLTILAGCAPCQPFSTYAQRYELDGKDGKWGLLYEFARLAKG 130
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+P I +ENV + K+E+ L ++ Y V FDV+ S YGV Q R R+V+LA
Sbjct: 131 AKPDVITMENVPTVA---KHEVFHDFVDTLKRLGYNVWFDVVDSSRYGVPQMRRRMVLLA 187
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
SK +G++ + +H + TVR AI L +S G
Sbjct: 188 SK----------------------HGDITMIEPTHE--KPKTVRQAIGRLRPLSAGEAA- 222
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
P+ H+ LS RI++ S P WRD
Sbjct: 223 -----PRDKL-----------------------HVTSTLSEKNLKRIKV--SKPGGTWRD 252
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
P+ V DC H A
Sbjct: 253 WPD-----------------------DLVADC---------------------HRAESGR 268
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ GV GR+ WD+ P N GR
Sbjct: 269 TYPGVYGRMEWDKP----------APTMTTQCYGFGN------GRFG------------- 299
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF---RGGIC--DMYKQIGNAVPPPLAK 590
HPEQDR +++RE A Q FP Y F G + + + IGNAVP L +
Sbjct: 300 ---------HPEQDRAISLREAAILQSFPRDYAFVPDDGEVSFKVLGRLIGNAVPVDLGR 350
Query: 591 AIGYEI 596
AI I
Sbjct: 351 AIARSI 356
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 48/304 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LFSG GGL G +G W++++++ ++Y N + ++ D + K + K
Sbjct: 5 VVSLFSGGGGLDLGFKNSGF-NIIWAIDIDKDAVSTYKENLGDHIILGDITKIQEKDIPK 63
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
D+++ GPPCQ FS + + R ++ + LV+ +L + +PK
Sbjct: 64 ---------------ADVVIGGPPCQSFSLVGKRRSDDE---RGQLVWQYLRIINEIRPK 105
Query: 240 YIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+ ENV GL E +L + ++ Y+V + VL + +YGV Q R R+ I+ +
Sbjct: 106 CFVFENVVGLKSAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGT 165
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ G K +FP P H K + I+V +A+ DLP +
Sbjct: 166 REGVKF-NFPLPTH--------------NEKGDDGKLKWISVEEALGDLPSPNTDG-IVK 209
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ P T +Q M++ N + + +H LS L +M I IP ++ D+
Sbjct: 210 YSKEPLTPYQLKMREN--------NFDDYVTEHSTPKLSELDKMIIEHIPV--GGNYMDV 259
Query: 417 PNIC 420
P+
Sbjct: 260 PDFV 263
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC-DMY 577
GRL D+ TI T N N G +H ++ R++TVRE R QGFPD+Y + +
Sbjct: 282 GRLRPDKPSYTINTYFNRPN-VGCNIHYKEKRLITVREALRLQGFPDNYKIKSSTKRGKH 340
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+GNAVPP L++AI ++++ I
Sbjct: 341 AIVGNAVPPILSEAIAKKVLESI 363
>gi|434405034|ref|YP_007147919.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428259289|gb|AFZ25239.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 466
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 14/229 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A++ NF + C KS+++
Sbjct: 40 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHQFNFPFWKIF---C----KSIVE 91
Query: 180 GHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
++ + S + E+D++ GPPCQGFS + + R L+ + NGLV ++ QP
Sbjct: 92 ITSEEIRSFSDIGEQEIDVVFGGPPCQGFSLIGK-RNLDDPR--NGLVDHYIRLVLELQP 148
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILAS 296
K+++LENV G+ E + I + + YQV + +L + YGV Q+R R+ +LA
Sbjct: 149 KFVVLENVKGMTVGKHQEFILEIIYKFEENGYQVLKNYKILNAAEYGVPQNRERLFLLAC 208
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +LP++P P + + + NL + T ++ + V + S+L
Sbjct: 209 RQDLELPNYPLPTSKPAKKKIAKSNNLPLSPTVSKAFQGLPVIENYSEL 257
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP+ R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 352 TSPRPI-------HPDIPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 404
Query: 592 IGYEIIKCI 600
I EIIK +
Sbjct: 405 IASEIIKVL 413
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDYDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|428305832|ref|YP_007142657.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428247367|gb|AFZ13147.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 22/231 (9%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A++ NF SV+ QD + K +
Sbjct: 11 VDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHKFNFPFWSVLCQDIASTTGKDI-- 67
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + E+D++ GPPCQGFS + + R L+ + N L F F+ QPK
Sbjct: 68 -----RIIPAIGNKEIDIVFGGPPCQGFSLMGK-RMLDDPR--NSLAFHFIRLIGELQPK 119
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNY--QVTFDVLQSGNYGVAQSRNRVVILASK 297
Y +LENV G+ + + I K+ Y + + +L + YGV Q+R R+ ++ +
Sbjct: 120 YFVLENVRGMAIGKHKKFIAEIIEEFQKIGYLTKSDYQILNAAEYGVPQNRERLFLIGCR 179
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
+LP +P L + Q N TS+ P TV DA+ DLP +
Sbjct: 180 QDMQLPKYPDKLTRPAKQ-------KKINSTSNLPLNP-TVWDALQDLPSI 222
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++QIGN+VPP LAKA
Sbjct: 323 TSPRPI-------HPFIPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKA 375
Query: 592 IGYEIIKCIGNAVPPP 607
+ EIIK +G + P
Sbjct: 376 VATEIIKALGATLIQP 391
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAIGICGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|434399073|ref|YP_007133077.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428270170|gb|AFZ36111.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 417
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 106/233 (45%), Gaps = 29/233 (12%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF-QECSVIQDDCNLVLKSLL 178
+DLFSGCGG+ GL AG SVE++ + NF ++ QD L + LL
Sbjct: 7 AIDLFSGCGGMSLGLEAAGFDIAA-SVEIDPIHCLVHHYNFPYGVTICQDISQLSSQELL 65
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T HKG + +DLI GPPCQGFSQ+ + R+L+ +N LVF +L +P
Sbjct: 66 NSIT-HKGFN----RNIDLIAGGPPCQGFSQIGK-RQLDDP--RNQLVFEYLRIVSEVKP 117
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILAS 296
KY I ENV G+ L + K +Y V VL + YG Q R R++++
Sbjct: 118 KYFIFENVPGMATGKHQHFLNELITEFAKSDYSVVQPIKVLDASLYGAPQKRKRLILIGY 177
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
+ P +P H N L +N TV AI DL +S
Sbjct: 178 RKDLPKPKYPAYTHG-DNNLQPLN----------------TVSSAIGDLSNIS 213
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H + R ++VRE AR FPD + F I +++IGNAV P LAK+
Sbjct: 310 TAPRPI-------HYQIPRCISVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLAKS 362
Query: 592 IGYEIIKCI 600
+G EIIKC+
Sbjct: 363 LGEEIIKCL 371
>gi|111220172|ref|YP_710966.1| DNA modification methylase [Frankia alni ACN14a]
gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific
methyltransferase) [Frankia alni ACN14a]
Length = 401
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 40/229 (17%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE---CSVIQDDCNLVLKSL 177
+DLF G GG+ G QAG + P +++ ++ ++ ANF C I+D +
Sbjct: 58 IDLFCGAGGMSLGFVQAGFS-PILAIDHDQPSIDTHRANFPGDSLCVDIRDVSDF----- 111
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
D+++ GPPCQGFS+L ++ +K +L+N L F+ Q
Sbjct: 112 ---------------PAADVVIGGPPCQGFSRL--GKKAKKERLENYLWMDFMRCVAASQ 154
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P ++ENV F K+ + K+ Y++ F VL + NYGV Q R R +++ S+
Sbjct: 155 PAVFVIENVP---EFLKDPAFLGVSREAKKLGYKLVFAVLNAANYGVPQRRQRTIVIGSR 211
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
G P P P H + +L P+R TVRDAISDLP
Sbjct: 212 IGE--PELPAPTHQEPQEQAAFFSDL-------PPWR--TVRDAISDLP 249
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTT---PNPLNKQGKILHPEQDRVLTVREYARAQGFPDS 566
R ++GRL WD TI T P ++G+ LHPE DR +TVRE AR Q FPD
Sbjct: 298 RGGGSTDLMGRLEWDAPSLTIRTQFLKP----EKGRYLHPEADRSITVREGARLQTFPDD 353
Query: 567 YVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+ F G + KQIGNAVP LA+ +G EI +
Sbjct: 354 FQFVGSTFQIVKQIGNAVPVELARQVGTEIFR 385
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ GL AG + V+ ++S ++ N + I D + ++
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQIR- 68
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
L ++LI GPPCQGFS + L+K +N L FL F + +P Y
Sbjct: 69 -------ELIGDRHINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLKPDY 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG- 299
II+ENVTGL+ L I CL + Y V VL + +YGV + R R + L ++ G
Sbjct: 119 IIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFGV 178
Query: 300 ---YKLPSF 305
Y P F
Sbjct: 179 PNLYPSPQF 187
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
L RLA D TI T+ + HP ++R LT RE A Q FP +++F G + +
Sbjct: 278 LKRLARDSYSPTINTS------RTTYYHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQW 331
Query: 578 KQIGNAVPPPLAKAIGYEIIK 598
+QIGNAVPP LAKA+G I+K
Sbjct: 332 RQIGNAVPPLLAKALGEAILK 352
>gi|374586019|ref|ZP_09659111.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
gi|373874880|gb|EHQ06874.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
Length = 340
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 48/268 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSGCGG+ +GL AG + S E+ +Y N E D L +LL
Sbjct: 7 AIDLFSGCGGMTQGLKSAGFS-VLASAEILAVARETYHDNHPEVRQYTDVRRLTGATLLS 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLSFCDLFQP 238
G E+DL+ PPCQGFS + R + + +N L+F FL +P
Sbjct: 66 DLNLRPG-------ELDLLAGCPPCQGFSTIRTRNKPNPVADERNELIFDFLRLALALRP 118
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K I++ENV GL+ K+ L+ L Y V DV+ + ++GV Q R R++++A++
Sbjct: 119 KAILMENVPGLM---KDRRLEKTARRLRAAGYDVEVDVIDAADFGVPQRRKRMILVATRT 175
Query: 299 GY-KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
G LPS + TV DAI DLP+ G + +
Sbjct: 176 GRASLPS--------------------------GDSKQRTVADAIRDLPKA--GKSGIHW 207
Query: 358 HNPPKTHFQRMM-------KDGSRIHDI 378
H+ + H +++M KDG D+
Sbjct: 208 HDLKRDHSEKVMNIIRRISKDGGSRSDL 235
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTT-PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
R + ++ V GRL+W++ TI + NP +G+ +HPE+DR +TV E A Q FP SY
Sbjct: 245 RTDGFRDVYGRLSWNKVSSTITRSCVNP--SKGRFIHPEEDRAITVFEAALLQSFPKSYR 302
Query: 569 FRGGI--CDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
F I ++ IG A+PP AK G I + I N
Sbjct: 303 FSRSINLTEVTSMIGEALPPLFAKKQGLHIRRKILN 338
>gi|315446158|ref|YP_004079037.1| DNA-methyltransferase Dcm [Mycobacterium gilvum Spyr1]
gi|315264461|gb|ADU01203.1| DNA-methyltransferase Dcm [Mycobacterium gilvum Spyr1]
Length = 365
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK +DLF+GCGG+ G G P +SVEL AA+Y ANF E + D + LK
Sbjct: 5 LKLIDLFAGCGGMTAGFKPQGF-DPVFSVELNLHAAATYAANFGEDHIFWGDIDEALKG- 62
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ E D+++ GPPCQGFS L + + +N L +L +
Sbjct: 63 -------------EVPEADVVIGGPPCQGFSNLGSK---DVNDPRNKLWKRYLEVVERAN 106
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ ++ENV + ++L + Y++T VL + +YGVAQ R R +++ S+
Sbjct: 107 PRVFVIENVQRFRRSAEFQLLLDEAEQGMLSRYELTHGVLLAADYGVAQRRPRTIVIGSR 166
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
G P+P H+ + L P+ TVRD I LP
Sbjct: 167 IGRI--DLPRPTHSKTPTL------------GREPW--ATVRDRIGALP 199
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD---------RVLTVREYARAQGFPDSY 567
V+GR+ WD TI T K G+ LHP+ D RV+T E A+ Q FP+SY
Sbjct: 273 VMGRMRWDAPSLTIRTEFFKPEK-GQYLHPQWDARDPRRRVNRVITHLEAAQLQDFPESY 331
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
V+ G ++ +QIGNAVP LA A+ I
Sbjct: 332 VWCGSKTEIARQIGNAVPVGLAAALARHI 360
>gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
Length = 398
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 54/300 (18%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
LDLF GCGG+ G +AG +++ + +Y N + V+ D +++ +
Sbjct: 58 LDLFCGCGGMSYGFEKAGF-DVLLGIDVWKDALVTYQHNHRSGGVLCADLSVITGKEVGQ 116
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN-RARELEKSKLKNGLVFTFLSFCDLFQPK 239
H K +VD+I+ GPPCQGFS R + +++KL G F+ F PK
Sbjct: 117 HLGGK--------QVDVIIGGPPCQGFSVAGKRIVDDDRNKLYKG----FVRMVSCFHPK 164
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
++ENV ++ I + I ++ Y+V++ VL + +YGV Q+R R + + G
Sbjct: 165 AFVMENVPNILTIGNGVIKESIIKDFSELGYKVSYKVLLASDYGVPQNRRRAIFVGMLDG 224
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCYLF 357
+ FP P T P +T ++AISDLP S +G +
Sbjct: 225 TEF-VFPSP-------------------TLETP---VTCKEAISDLPEDSLPEGGE---Y 258
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
P++ +Q++M++GS + + +H + + + I ++P +++DLP
Sbjct: 259 PADPQSEYQKLMREGS----------DGVYNHEITVHNERTKEIIAMVPD--GGNYKDLP 306
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
H E +RV T RE AR Q FPD++VF G KQIGNAVPP +A+AI +I+K
Sbjct: 339 FHYEYNRVPTARESARIQSFPDTFVFIGNKTSKLKQIGNAVPPFMAQAIAGQILK 393
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 31/239 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GG+ G QAG + W+ +L A +Y N ++VLK L
Sbjct: 4 MKVISLFSGAGGMDLGFIQAG-HEIIWANDLYEDAAETYKKNIGN--------HIVLKDL 54
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T ++P + D+++ G PCQGFS N R ++ + N L L Q
Sbjct: 55 KEVDTN----NIP---DGDIVIGGFPCQGFSVANMNRSVDDER--NTLYLEMLRVIQDKQ 105
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV G++ K +++ I Y V + +L + +YGV Q+R RV I+ +
Sbjct: 106 PKFFVAENVKGILSLGKGAVIKMICKDFENAGYNVQYKLLNAADYGVPQTRQRVFIVGVR 165
Query: 298 PGYKLP-SFPQPLHAFSN--QLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
L S+P P H S LF +N A + +T+ +A+SD+P + N
Sbjct: 166 KDLDLTYSYPTPTHEESPTFDLFNLN----------ALQKWVTIGEALSDIPEPDEAHN 214
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKIL--HPEQDRVLTVREYARAQGFPDSYVFRG 571
+ G +G D + + T NK G ++ HP+ R L+VRE A Q FP Y F G
Sbjct: 227 FNGYIGHRVTDPNKPSPTITARGDNKGGAVINHHPKNHRRLSVREVAIIQSFPLDYEFVG 286
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEI 596
Y+QIGNAVPP LA + EI
Sbjct: 287 STTSCYRQIGNAVPPLLAYYVAKEI 311
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 125/301 (41%), Gaps = 51/301 (16%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K +DLFSG GGL G AG + E++ S A SY N E +I +D +
Sbjct: 3 KIIDLFSGVGGLSIGFRNAGY-NVVLANEIDASIANSYQKNHPETKMINEDITKL----- 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + +V +I+ GPPCQGFSQ + + L +N L F +P
Sbjct: 57 -----DIADTFAEYRDVGMIIGGPPCQGFSQ--KGKRLSLRDPRNYLFRYFFDVVKFVKP 109
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ ++ENV L+ I+ + Y+V DVL + +YGV Q+R R +I+ S
Sbjct: 110 ENFVIENVPNLLTAANGYFKNEIYELFESLGYEVISDVLNAKDYGVPQARRRAIIIGSLR 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP--RVSQGANCYL 356
L FP+ + + TV DAISDL +G
Sbjct: 170 KNVL-KFPKKQNEMT-----------------------TVWDAISDLAFLESGEGEQVQE 205
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ P++ +Q MM R H + L +H+ S L R+ L+P N DL
Sbjct: 206 YKFIPQSKYQEMM----RKHSTN------LYNHVATKHSALAIERMMLVPE--NGGREDL 253
Query: 417 P 417
P
Sbjct: 254 P 254
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
+ G GR+ + TI T TP+ G+ HP +R +TVRE AR Q FPD+ +F
Sbjct: 263 FSGTWGRMDKNSQSVTITTRFDTPS----SGRFTHPYLNRAITVREAARIQSFPDNMIFY 318
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G KQ+GNAVPP +A+AI I++
Sbjct: 319 GTKTSQMKQVGNAVPPLMAEAIANSILQ 346
>gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
Length = 436
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL G+ AG + S+E++ +A ++ NF C+ I D + V L
Sbjct: 14 AIDLFSGAGGLSLGIESAGF-EVVISIEIDPVHSAIHNYNFPNCANICRDISNVSSEELW 72
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
K ++ EVDL+ GPPCQGFSQ+ R +E +N LVF ++ +P+
Sbjct: 73 NILNDKDIN-----EVDLLAGGPPCQGFSQMG-YRHIEDP--RNKLVFEYVRVVRDIKPR 124
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQ--VTFDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+V ++ + H +++ Y V +L + ++GVAQ+R+R+++L +
Sbjct: 125 YFIFENVPGIVSGKHKGFIEDLCHEFIQIGYNTIVPVLILNAADFGVAQNRSRLILLGWR 184
Query: 298 PGYKLPSFP 306
P +P
Sbjct: 185 KDMPKPVYP 193
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +++RE AR FPD + F I ++QIGN+VPP LAK
Sbjct: 327 TAPRPI-------HYSHPRCISIREAARLHSFPDWFQFHRTIWHGHRQIGNSVPPLLAKE 379
Query: 592 IGYEIIKCIG 601
I +I +G
Sbjct: 380 IAQSLIGLLG 389
>gi|376002264|ref|ZP_09780102.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|423067964|ref|ZP_17056754.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|375329355|emb|CCE15855.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|406710502|gb|EKD05713.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 423
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + NF C I D + V + +
Sbjct: 19 AIDLFAGCGGMSLGLEAAGF-DVAVAVEFDAVHCLVHHFNFPYCHTICRDISKVTSAEIL 77
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q K Q +VDLI GPPCQGFS + + R+L+ +N LVF +L QPK
Sbjct: 78 EQLQLKY----QDTQVDLIAGGPPCQGFSHIGK-RQLDDP--RNSLVFEYLRMIAEIQPK 130
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ L + + YQ+ +L + YG Q R R++++ S+
Sbjct: 131 YFIFENVPGIATGKHKRFLNELITEFEAIGYQIQKPIKILDASEYGAPQKRKRLILIGSR 190
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
K+ +P NK+ TV AISDL ++ N
Sbjct: 191 FDVKIAEYP-----------------ATNKS-----EMFTVYQAISDLEKIDHFTN 224
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +T+RE AR FPD + F I +++IGNAV P LAK
Sbjct: 317 TAPRPI-------HYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQ 369
Query: 592 IGYEIIKCIG 601
+G +I +G
Sbjct: 370 LGGSVIDALG 379
>gi|428316806|ref|YP_007114688.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428240486|gb|AFZ06272.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 391
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ +GL QAG +P SVE+ +A++ NF C + DD +K
Sbjct: 63 VDLFCGAGGMTQGLLQAGF-RPVASVEINPIASATHTKNFPACHHLCDD--------IKN 113
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
K ++ EV ++V GPPCQGFS A + + + +N L F+ +P Y
Sbjct: 114 LNPQKLLAEIGSPEVHVVVGGPPCQGFSV---AGKRDPNDPRNRLFREFVRVVSEIRPWY 170
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV G++ K + Q I ++ Y ++ VL+S YGVAQ R R + +A++ G
Sbjct: 171 VVIENVPGILTIQKGAVKQAICEAFQEIGYPDMSVAVLESAAYGVAQIRPRAIFIANRFG 230
Query: 300 YKLP 303
+ P
Sbjct: 231 MQNP 234
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IG+ +I
Sbjct: 311 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGSMKKAMWQIGNAVPPRLAECIGFALI 370
>gi|315054007|ref|XP_003176378.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
gi|311338224|gb|EFQ97426.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
Length = 1091
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+LFSG G GL + + W+VE + +Y AN + + C V L
Sbjct: 633 LKALNLFSGGGTFDRGLEEGTAIESKWAVEWGLQQMLTYRANHPDGKGLNLFCGSVNDYL 692
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + + +V I AG PCQG+S N R E S + ++ + S+ D ++
Sbjct: 693 SQAFRGEEHEYIAGIGDVHFISAGSPCQGYSTANAHRHNEMSMRNSSMITSVASYVDFYR 752
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENVTG+ ++ L + + M YQ L + N+G QSR+R+ I +
Sbjct: 753 PQYAILENVTGMASRTHEQNPLSQLLCAFVGMGYQARVFNLDAWNFGAPQSRSRLFIAVT 812
Query: 297 KPGYKLPSFPQPLHAF--SNQLFTI----NGNLVANKTSHAP-YRSITVRDAISDLPRVS 349
PG + P H+ + T+ NG+ + P + I+ A DLP ++
Sbjct: 813 APGLHIIEHPPLTHSHPPGTKSRTLGDNPNGSTFGERRWDTPVFDFISASSATRDLPPIN 872
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 527 FDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ T+ P G+ LH +++R++TV+E RAQG+PD+ V G +K +GN+V
Sbjct: 945 FPTVTTSVCPFCIFTGRWLHWQENRLVTVQEVRRAQGYPDNEVLIGSPVHQWKIVGNSVA 1004
Query: 586 PPLAKAIGYEIIK-CIGN 602
+A A+G + + CI N
Sbjct: 1005 RQVALALGLAVREACIRN 1022
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 36/269 (13%)
Query: 109 KFPMPLDTPL-KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
K PM +TP+ + LDLFSG GG+ G+ + +++ ++ N + +
Sbjct: 260 KQPMKEETPMFRILDLFSGAGGMSYGMEKNEHFTTEVALDFNEKALQTFKHNMPDTETV- 318
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
C + +K K + L + +V++I+ GPPCQGFS + ++L +N L
Sbjct: 319 --CGDITDEKIKA----KVIELCKAKKVNMIIGGPPCQGFSL--KGKKLGLDDPRNFLFN 370
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
+L F ++ +P+ ++ENV L+ + I + +M Y V + VL + ++GV Q+
Sbjct: 371 EYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQA 430
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
R R + + SK S P P T P +TVRDAI DL
Sbjct: 431 RQRAIFICSKN----KSIPLPA-----------------ATCETP---VTVRDAIYDLAY 466
Query: 348 VSQGANCYL--FHNPPKTHFQRMMKDGSR 374
++ G + + P + +Q+ M+ GS+
Sbjct: 467 LNSGEGEFEQDYITEPSSEYQKQMRRGSK 495
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
N + G GRL WD TI T + + G HP R +T RE AR Q F D +VF
Sbjct: 532 NQQFSGTWGRLKWDAVSPTIDTRFDA-SSNGTNNHPFLHRAITPREAARIQSFDDKFVFI 590
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEI 596
G + +QIGNAVPP +AKAI +I
Sbjct: 591 GQKLYIRQQIGNAVPPLMAKAIADQI 616
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFSALIGLDCDKQALNTFENNHKNAVGICGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAGIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV QSR R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGATH 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + +L+ P +S++V++AISDL + ++GA
Sbjct: 175 ------------------FSFDFDLL------EPSQSVSVQEAISDLAYLHSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++++Q +M+ S
Sbjct: 211 YLNPIQSNYQALMRKNS 227
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLSWNKISPTIDTRFDTPS----NGTNSHPELHRFITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 430
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + NF C I D + V + +
Sbjct: 19 AIDLFAGCGGMSLGLEAAGF-DVAVAVEFDAVHCLVHHFNFPYCHTICRDISKVTSAEIL 77
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q K Q +VDLI GPPCQGFS + + R+L+ +N LVF +L QPK
Sbjct: 78 EQLQLKY----QDTQVDLIAGGPPCQGFSHIGK-RQLDDP--RNSLVFEYLRMIAEIQPK 130
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ L + + YQ+ +L + YG Q R R++++ S+
Sbjct: 131 YFIFENVPGIATGKHKRFLNELITEFEAIGYQIQKPIKILDASEYGAPQKRKRLILIGSR 190
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
K+ +P NK+ TV AISDL ++ N
Sbjct: 191 FDVKIAEYP-----------------ATNKS-----EMFTVYQAISDLEKIDNFTN 224
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +T+RE AR FPD + F I +++IGNAV P LAK
Sbjct: 317 TAPRPI-------HYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQ 369
Query: 592 IGYEIIKCIG 601
+G +I +G
Sbjct: 370 LGGSVIDALG 379
>gi|428221921|ref|YP_007106091.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427995261|gb|AFY73956.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 441
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 112/235 (47%), Gaps = 26/235 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE+ A + NF SVI C V +
Sbjct: 9 AVDLFAGAGGMTLGFEQAGF-DVLASVEINPVHCAIHKFNFPHWSVI---CQSVTD--IS 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G + + S E+D++ G PCQGFS + + R L+ + N LV FL PK
Sbjct: 63 G-DEIRTKSTINNAEIDVVFGGSPCQGFSLIGK-RALDDPR--NALVSHFLRLVTELNPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASK 297
Y +LENV GL + L + NY+V D VL + +YGV QSR+R+ ++ +
Sbjct: 119 YFVLENVKGLTIGKHRQFLAEVIAEFESHNYEVLRDYRVLNASHYGVPQSRDRLFLIGCR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI----TVRDAISDLPRV 348
G KLP++P P I K + S+ TV DAI+DLP++
Sbjct: 179 QGLKLPNYPLP----------ITKPPKLGKNPPQEFVSLPNCPTVWDAIADLPKI 223
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F G ++Q+GN+VPP LAK
Sbjct: 325 TSPRPI-------HPYLPRCITVREAARLHSYPDWFRFHGTKWHGFQQVGNSVPPLLAKV 377
Query: 592 IGYEIIKCI 600
+ E+IK +
Sbjct: 378 VASELIKVL 386
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFDTLIGLDCDKQALITFENNHKNAISVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKDS 227
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|423486158|ref|ZP_17462840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|423491882|ref|ZP_17468526.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|423501326|ref|ZP_17477943.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401153950|gb|EJQ61371.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401158020|gb|EJQ65415.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|402439994|gb|EJV71991.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 357
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 135/330 (40%), Gaps = 49/330 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+D+F GCGGL G AG ++ S+ N + D L +
Sbjct: 8 VIDMFCGCGGLSRGFMDAGY-DVLLGIDNNEPALKSFKENHNGAIAMNGD-------LFQ 59
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G T + L +DLI+ GPPCQGFS + E ++ +N L ++ FQPK
Sbjct: 60 GSTILEMAHLTDNKSIDLIIGGPPCQGFSLTGKRNENDE---RNTLFEAMVNAVAFFQPK 116
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+LENV GL + + + I + Y +T+ VL + +YG+ Q R R+ + G
Sbjct: 117 AFVLENVPGLATLYQGKAKEAIMKEFETLGYTITYKVLYAPDYGIPQIRKRLFFVGLSNG 176
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCYLF 357
+ FP+P + P +T DAI DL G + +
Sbjct: 177 MEF-EFPEP--------------------ALIPENYVTCEDAIGDLHDFEHDLGTDISEY 215
Query: 358 HNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
N PKT +Q+ M+ ++ L +H+ +P + I +P + +DLP
Sbjct: 216 LNLPKTVYQKKMRKYAKN----------LYNHVGTKHTPEVINVISQVPE--GGNHKDLP 263
Query: 418 NICVKLPRGQHSYTEKLKYNAKKKKSVCDC 447
+ + ++T +Y++KK D
Sbjct: 264 PGVGESRKFNEAWT---RYHSKKPSKTIDT 290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
H + +RV TVRE AR Q FPD + F G + YKQ+GNAVPP L +G ++ K +
Sbjct: 296 FHYKYNRVPTVRENARLQSFPDDFKFLGNKTEQYKQVGNAVPPLLGYHLGTQLKKYL 352
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 113/241 (46%), Gaps = 26/241 (10%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 320 LPLSGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 379
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P L
Sbjct: 380 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEDL---- 435
Query: 307 QPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG-ANCYLFHN--PPKT 363
Q+ I + K +A +T+ DAISDLP V+ AN + +N PKT
Sbjct: 436 --------QVGRIQMEFL--KLDNA----LTLADAISDLPPVTNYVANDVMDYNDAAPKT 481
Query: 364 HFQRMM---KDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNIC 420
F+ + + + + + L DH +L R+ IP A++RD+P +
Sbjct: 482 EFENFISLKRSETLLPAFGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVL 541
Query: 421 V 421
V
Sbjct: 542 V 542
>gi|423262634|ref|YP_007012659.1| DNA-cytosine methyltransferase [Mycoplasma hyorhinis SK76]
gi|422035171|gb|AFX74013.1| DNA-cytosine methyltransferase [Mycoplasma hyorhinis SK76]
Length = 413
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ------ECSVIQDDCNL 172
K +DLFSG GGL GL AG +P SVE+ +Y NFQ E +D ++
Sbjct: 93 KFIDLFSGAGGLSCGLVMAGF-EPIASVEIMPDAVETYVYNFQNRKKKEELIETRDIRDV 151
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLS 231
+K L + G+ DLIV G PCQGFS NR + +N L L
Sbjct: 152 KVKEELYNKFKDTGI--------DLIVGGFPCQGFSMAGNRVVD----DPRNSLYLEMLE 199
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK++++ENV GL ++ Q I + + YQ+ L S +Y VAQ+R RV
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKRV 259
Query: 292 VILASKPGYKLPSFPQPL 309
+ +A+K K+ FP+P+
Sbjct: 260 IFIANKIN-KINYFPKPI 276
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP+ RVLT RE A Q PD ++F+G QIGNAVPP LAKAIG+ I
Sbjct: 348 NHGGVNIHPKLPRVLTPRELAALQSSPDDFIFKGSKKWQLVQIGNAVPPLLAKAIGFAIK 407
Query: 598 KCI 600
K +
Sbjct: 408 KSL 410
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S++V+DAISDL + ++G+
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVSVQDAISDLAYLCSNEGSFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|269978372|gb|ACZ55920.1| putative type I restriction-modification system specificity subunit
S [Helicobacter pylori]
Length = 263
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSGCGGL G + G + W+ + + +Y N V D
Sbjct: 11 KIISLFSGCGGLDLGFIKEGF-EVIWANDFFKEAVETYQKNIGSHIVYGDI--------- 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
T+ +P +E D+++ G PCQGFS N R +E + N L L QP
Sbjct: 61 ---TKIPSGDIP--NECDVLLGGFPCQGFSVANTKRSMEDER--NFLYKELLRLLKDKQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ + ENV GL+ K ++++ I + Y V + +L++ +YGV Q R RV+I+ ++
Sbjct: 114 KFFVAENVKGLLSIQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRERVIIIGNRL 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G K P FP+ H N LF PY + V+D + L +
Sbjct: 174 GLKNP-FPKKTHGLCNDLFN---------EKLKPY--VCVKDVVGHLANI---------- 211
Query: 359 NPPKTHFQRMMKDGSRIHD 377
+T M DG IH+
Sbjct: 212 ---RTRDASFMLDGVMIHN 227
>gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 508
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG G AG A +V+++ A +Y NF + VL L
Sbjct: 9 IDLFCGAGGFSLGFRAAG-ALSLAAVDIDEVAARTYRRNFGKLQPGM--APHVLSGDLGN 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR--ELEKSKL----KNGLVFTFLSFCD 234
+ S+ + +D+++ GPPCQGFS++ R + L S+ +N L F F+ D
Sbjct: 66 LEEIDLGSIVHERTLDILIGGPPCQGFSRIGRGKLASLAGSRTAHDPRNTLYFAFMEAAD 125
Query: 235 LFQPKYIILENVTGLVHFNKN---------EILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
+QPK I++ENV G++ + N + L+ Y+ F VL + YGV
Sbjct: 126 RWQPKAIVIENVPGMLSVDVNSSSHPEEDLSFAEKAASDLVARGYRAGFAVLNAAMYGVP 185
Query: 286 QSRNRVVILASKPGYKL-PSFPQPLHAF---------SNQLF----TINGNLVANKTSHA 331
Q R R+ + + + PS P H S +LF I+ +L + TS A
Sbjct: 186 QLRERIFFIGIRKDLAVRPSVPPSTHLIGTPSGYTVPSAELFLPFDDIHHDLSVD-TSKA 244
Query: 332 PYRSITVRDAISDLPRVSQ 350
R+ TVRDAI DLP + +
Sbjct: 245 SSRATTVRDAIGDLPPIEE 263
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG--NAV 604
EQ R ++VRE AR Q FPD + F G + D ++QIGNAVPP LA A+ ++ +G
Sbjct: 440 EQARAISVREAARLQSFPDGFRFEGNMGDCFRQIGNAVPPLLAWAVAAHLLTLLGFRKVR 499
Query: 605 PPPLAKA 611
PPL +A
Sbjct: 500 QPPLLRA 506
>gi|254421659|ref|ZP_05035377.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp.
PCC 7335]
gi|196189148|gb|EDX84112.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp.
PCC 7335]
Length = 427
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GGL G QAG P ++E++ AA + NF C VI V
Sbjct: 11 AIDLFAGAGGLCLGFEQAGFDVPV-AIEIDPIHAAVHRFNFPLCKVIPRSVKEV-----T 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G L + + ++ G PCQGFS + R L +N LV FL D QP
Sbjct: 65 GKEILSVAKLSSQQPITAVIGGAPCQGFSVMG-PRSL--CDPRNELVKDFLRLVDELQPS 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y + ENV GL +L+ I + +NY++ + VL + NYG+ Q+R R+ ++ ++
Sbjct: 122 YFVFENVKGLTCDRNRPVLEAIIDQIAAINYRLVDPWQVLNARNYGIPQNRERLFLVGAR 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
LP +P+PL H+P T A+ DLP V Q
Sbjct: 182 NNTCLPIYPKPL-------------------KHSP----TCTHALGDLPDVEQ 211
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A +S T+P P+ H R +TVRE AR GFPD + F +Q+G
Sbjct: 301 AGTDSARGSFTSPRPI-------HYRYARCITVREMARLHGFPDWFRFHSTKWHGARQVG 353
Query: 582 NAVPPPLAKAIGYEIIKCI 600
N+VPPPLA+AI EI+K +
Sbjct: 354 NSVPPPLARAIALEILKVL 372
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAAIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M K+ S++++
Sbjct: 211 YLNPIQSSYQALMRKNSSKLYN 232
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLFSG GGL+ G AGV + + +++RS + N E +V+ DD +
Sbjct: 698 KSLDLFSGAGGLLYGFKMAGV-EHVLANDIDRSACVTLKINNPEVNVLCDD-------VT 749
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+T+ + ++ VD+I GPPCQGFS L R+ + + N LV F +P
Sbjct: 750 NEYTKEIIIDTAIQNNVDIICGGPPCQGFS-LAGFRKSDDPR--NKLVLDFADIIKNVEP 806
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K + ENV GL+ +NK E I L + Y++ + L +YGV Q R RV+I+ +
Sbjct: 807 KVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAETLDFSDYGVPQRRRRVIIIGVRN 866
Query: 299 GYKL-PS--FPQPL 309
+ PS FP +
Sbjct: 867 NINIEPSKLFPDKI 880
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 517 VLGRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
+ GR+ + TI T N P N G +HP QDRVLT RE AR Q FPD Y F G D
Sbjct: 612 LYGRIDYTNPSYTITTYFNRPGN--GCYIHPTQDRVLTTREGARIQCFPDDYYFYGNQRD 669
Query: 576 MYKQIGNAVPPPLAKAIGYEI 596
+ QIGNAVPP + I +I
Sbjct: 670 ILNQIGNAVPPLMGYLIAKKI 690
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 42/308 (13%)
Query: 109 KFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
KFP +P+ DLF+G GG+ G AG P +VE++ +Y N + +VI++
Sbjct: 2 KFPNKKVSPI---DLFAGAGGMSLGFENAGFEIPL-AVEIDDWAVDTYRKNRENSNVIKN 57
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
D + + K Q G+ D ++ GPPCQGFS ++ + +N L
Sbjct: 58 DILEIDNAFFK---QFSGI--------DAVIGGPPCQGFS-ISASNRRNPDDPRNYLYRQ 105
Query: 229 FLSFCDLFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
FL L +P+ + +ENV +V F N +L I CL ++ Y + ++ + ++G+
Sbjct: 106 FLRVIKLVKPRIVFMENVKEIVKFVLPNGKLLLDEIIFCLEELGYSIKPFIINAADFGIP 165
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
Q R R ++AS L P L + ++ +L+ P + V AISDL
Sbjct: 166 QERIRFFMVAS-----LGPVPDLLQEAT---YSETVDLL------RPNKYRDVYSAISDL 211
Query: 346 ----PRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMR 401
PR + + + + N P ++QR+M+ GS HI +R H + + +R
Sbjct: 212 PAVYPRQHEEGDTFEYDNQPVNNYQRLMRKGSANIYNHIPMR-----HTDRTIEKFKMIR 266
Query: 402 IRLIPSFP 409
+ I S P
Sbjct: 267 TQGIDSLP 274
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 18/76 (23%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRG-------------GI-----CDMYKQIGNAV 584
+HP QDR LTVRE AR Q FPD+Y+F G GI D + Q+GNAV
Sbjct: 317 FIHPYQDRNLTVREAARIQSFPDNYIFYGKRTTLSKKLLEKKGIFEDVHLDQFNQVGNAV 376
Query: 585 PPPLAKAIGYEIIKCI 600
PP LA+ II+ +
Sbjct: 377 PPLLAEKFASIIIQSL 392
>gi|386284382|ref|ZP_10061604.1| modification methylase HaeIII [Sulfurovum sp. AR]
gi|385344667|gb|EIF51381.1| modification methylase HaeIII [Sulfurovum sp. AR]
Length = 409
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 142/303 (46%), Gaps = 38/303 (12%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC--NL 172
+ PL +DLF+G GG EG Q G K +E ++ + + ++D +
Sbjct: 18 EKPLTFIDLFAGAGGFAEGFYQEGY-KALSHIEFDKYACDTLRHRMKHYGYDEEDIKHGV 76
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL--KNGLVFTFL 230
+ + + K + ++VD+I+ GPPCQ FS +AR+ K +N L ++L
Sbjct: 77 LCEDITSKDIIEKMDKSVKGNDVDIIIGGPPCQSFSSQGKARDPHSMKCDPRNYLYESYL 136
Query: 231 SFCDLFQPKYIILENVTGLV--HFNKNEILQCIFHCLLKMNYQVTFD----VLQSGNYGV 284
+ ++PK+ + ENVTGL+ N +I++ I +K NY + + VL S ++G+
Sbjct: 137 KILNHYRPKFFVFENVTGLLSTEINGKKIIETIMKD-MKKNYNIVEEKSEIVLNSSDFGI 195
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
Q R RV+I+ + + P + + +A + + P +TV+DA++D
Sbjct: 196 PQERKRVIIIGVRKDIDI----HPKAIYED---------LAEISKNEP--KVTVQDALAD 240
Query: 345 LPRV--SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP++ QG +C F P KT+ + I E L H+ + + L + R
Sbjct: 241 LPKLKAGQGEDCIDF-IPEKTN--------EYLKKIRSENYEKLHHHVARTHNDLDKKRY 291
Query: 403 RLI 405
+L+
Sbjct: 292 KLM 294
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQG-KILHPE--QDRVLTVREYARA 560
L H R N V+ R +D TI+ L K G + +HP+ Q+R T RE AR
Sbjct: 311 LKHPKKRLFNNSYVVQR--FDMPSKTIIAH---LYKDGNQFIHPDHTQERTFTPREAARC 365
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
Q FPD +VF YKQIGNAVPP LAK I
Sbjct: 366 QSFPDDFVFPCSKTQQYKQIGNAVPPLLAKTIA 398
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ L +DLFSG GGL G AG ++ + +++ N + ++ D
Sbjct: 1 MSNKLSVIDLFSGAGGLSYGFELAGY-DILLGIDNDFDALRTFEKNHKNSKTLEGD---- 55
Query: 174 LKSLLKGHTQHKGVS-LPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+ T K + L ++D+IV GPPCQG S L+ R+ E + N L +++
Sbjct: 56 ----ITQFTYEKDIKPLINDQKIDIIVGGPPCQGMS-LSGPRKFEDPR--NSLYLSYIRL 108
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+PK ++ENV GL K +I I +M Y+V + +L + ++GV Q R R+V
Sbjct: 109 VSEIRPKAFVIENVPGLASLFKGQIKDSIIEKFTEMGYKVNYKILVASDFGVPQKRRRIV 168
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ-- 350
+ N +F N + +T A+SDLP +
Sbjct: 169 FV----------------GLQNDVFDFN---------FPEFGMVTTEMALSDLPSLEDEL 203
Query: 351 GANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPN 410
G + N P+ +Q++M+ GS L +H+ + + I L+P+
Sbjct: 204 GTEESEYSNKPQNSYQKVMRTGS----------AKLMNHVAANHNQKTKDIISLVPA--G 251
Query: 411 ADWRDLP 417
+++DLP
Sbjct: 252 GNYKDLP 258
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
H + +RV TVRE AR Q FPD ++F G ++Q+GNAVPP +AK I
Sbjct: 291 FHYQYNRVPTVRESARLQSFPDKFIFTGSKTKQFRQVGNAVPPLMAKVIA 340
>gi|431901786|gb|ELK08663.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 122
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 59/85 (69%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G+ GRL WD F T VT P+ KQG +LHP+Q V++V E A ++GFPD+Y G I D
Sbjct: 18 GLYGRLEWDGFFSTTVTNHEPMGKQGLVLHPKQHHVVSVHECACSRGFPDTYRLFGNIMD 77
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCI 600
+Q+GNAVPP LAKAIG EI +C+
Sbjct: 78 KIQQVGNAVPPQLAKAIGLEIKRCM 102
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 36/269 (13%)
Query: 109 KFPMPLDTPL-KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
K PM +TP+ + LDLFSG GG+ G+ + +++ ++ N + +
Sbjct: 340 KQPMKEETPMFRILDLFSGAGGMSYGMEKNEHFTTEVALDFNEKALQTFKHNMPDTETV- 398
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
C + +K K + L + +V++I+ GPPCQGFS + ++L +N L
Sbjct: 399 --CGDITDEKIKA----KVIELCKAKKVNMIIGGPPCQGFSL--KGKKLGLDDPRNFLFN 450
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQS 287
+L F ++ +P+ ++ENV L+ + I + +M Y V + VL + ++GV Q+
Sbjct: 451 EYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQA 510
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
R R + + SK S P P T P +TVRDAI DL
Sbjct: 511 RQRAIFICSKN----KSIPLPA-----------------ATCETP---VTVRDAIYDLAY 546
Query: 348 VSQGANCYL--FHNPPKTHFQRMMKDGSR 374
++ G + + P + +Q+ M+ GS+
Sbjct: 547 LNSGEGEFEQDYITEPSSEYQKQMRRGSK 575
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 511 NNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
N + G GRL WD TI T + + G HP R +T RE AR Q F D +VF
Sbjct: 612 NQQFSGTWGRLKWDAVSPTIDTRFDA-SSNGTNNHPFLHRAITPREAARIQSFDDKFVFI 670
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEI 596
G + +QIGNAVPP +AKAI +I
Sbjct: 671 GQKLYIRQQIGNAVPPLMAKAIADQI 696
>gi|408399430|gb|EKJ78533.1| hypothetical protein FPSE_01342 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LDLF G G GL G + W+ + + +Y AN + + +
Sbjct: 814 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSI-DDM 872
Query: 178 LKGHTQHKGV-SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ Q K ++P +VD I G PC GFS L + + LV F SF DL+
Sbjct: 873 QRFAIQGKFTENVPPVGDVDFISGGSPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFIDLY 932
Query: 237 QPKYIILENVTGLVHFNKN---EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+P+Y +LENV G++H N ++ + ++ + YQ F L + + G Q R+RV +
Sbjct: 933 RPRYGLLENVPGIIHSKVNRDQDVFSQLICAIVGLGYQTQFFFLDASSCGSPQRRSRVFV 992
Query: 294 LASKPGYKLPSFPQPLHAFSNQL------FTINGNLVANKTS--HAPYRSITVRDAISDL 345
+ + PG+ LP P HA T G+ +A + P+ ++ R A + L
Sbjct: 993 VFAAPGHHLPQRPHITHAHPEHTKNYGLGSTPTGDPMAERIMPIATPFDFVSARAATAGL 1052
Query: 346 PRV 348
P V
Sbjct: 1053 PPV 1055
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDTYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1033
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ---ECSVIQ 167
P+ L+ L+LFSG G GL + + W+VE + +Y AN + + + +
Sbjct: 577 PLEPKRRLRALNLFSGGGSFDRGLEEGTAIRSEWAVEWGLDQMLTYRANHESSHDLKLFR 636
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
N L LKG L Q V+ I G PCQG+S N + E S + ++
Sbjct: 637 GSVNDYLALALKGDKSDLIAKLGQ---VEFISGGSPCQGYSLANPQKWSEMSLRNSSMIA 693
Query: 228 TFLSFCDLFQPKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
+ +++ D ++P Y ILENV + +K L + + M YQ+ L + +YG Q
Sbjct: 694 SVVAYVDFYRPHYAILENVPAMASKTHKRNPLSQLICAFVGMGYQLRLMHLDAWSYGAPQ 753
Query: 287 SRNRVVILASKPGYKLPSFPQPLHA 311
SR+R+ +L + PG +LP P H+
Sbjct: 754 SRSRLFLLIAAPGLELPDHPPLTHS 778
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
TI T +P K G+ LH ++R+LTV E RAQG+PDS V G +K +GN+V
Sbjct: 901 TITTNISPSCKFTGRWLHWRENRLLTVMEARRAQGYPDSEVLVGRASSQWKIVGNSVARQ 960
Query: 588 LAKAIGYEIIK-CIGN 602
+A A+G I + C+ N
Sbjct: 961 VALALGLSIREACLHN 976
>gi|421808478|ref|ZP_16244325.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC035]
gi|410415626|gb|EKP67411.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC035]
Length = 422
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 57/277 (20%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL- 172
+ + + LD+F+G GGL EG QAG P VE + + A+ Q ++D+ +
Sbjct: 4 VSSSFRFLDVFAGAGGLSEGFIQAGFM-PVAHVEADEAACATLKTR-QAYHWLKDNNKID 61
Query: 173 VLKSLLKGHTQHKGV--SLPQK----------------------------HEVDLIVAGP 202
+ K L+G+ +PQ+ ++D+IV GP
Sbjct: 62 IYKDYLEGNITRNEFWGMVPQEVLDSVINEFIGPESLKSIFEKVDKFLNGKKLDIIVGGP 121
Query: 203 PCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF---NKNEILQ 259
PCQ +S + RAR ++ +N L + F ++P+Y + ENV GL+ N + +
Sbjct: 122 PCQAYSVIGRARGNMENDPRNHLYIYYAEFLKKYEPEYFVFENVLGLLSAKDKNGDSYFK 181
Query: 260 CIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI 319
+F+ +M Y V + VL + +YGV Q+R RV+++ K +P+ L N +
Sbjct: 182 KMFNLFNEMGYAVEYKVLTAADYGVLQNRKRVILIGKKGVEHKEFYPELLKVDLNAM--- 238
Query: 320 NGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
V DA+ DLP++ G +L
Sbjct: 239 ------------------VWDALEDLPKIKAGEGSHL 257
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 544 LHP--EQDRVLTVREYARAQGFPDSYVFRG-----GICDMYKQIGNAVPPPLAKAIGYEI 596
+HP EQ+R LT RE AR Q FPD Y F YKQIGNAVP LA I +I
Sbjct: 357 IHPDIEQNRSLTPREAARLQTFPDDYFFESQSGKPSRTSAYKQIGNAVPVLLANKIAEKI 416
Query: 597 IKCI 600
++ +
Sbjct: 417 MEYL 420
>gi|431758608|ref|ZP_19547233.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616976|gb|ELB53862.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 352
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 49/306 (16%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ T L +DLFSG GGL G AG ++ + + ++ N + ++ D V
Sbjct: 1 MKTELNIIDLFSGAGGLSYGFELAGF-NVLLGIDNDETALNTFKMNHKNSEILCGDITEV 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+T+ + K +D+IV GPPCQG S L+ R+ E + N L +++
Sbjct: 60 ------SYTKDIKPIIGDKR-IDVIVGGPPCQGMS-LSGPRKFEDPR--NKLYLSYIRLV 109
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+PK ++ENV G+V K +I I +M Y V F +L + +YGV Q R RV+
Sbjct: 110 KEIKPKAFVIENVIGIVSLFKGQIKNHILKEFSEMGYNVQFKILLASDYGVPQKRKRVIF 169
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--G 351
+ + + ++P P+ +IT AISDLP + G
Sbjct: 170 VGTLAEKEF-TYPNPVDY-----------------------TITTEMAISDLPSLENELG 205
Query: 352 ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNA 411
+ P+ +Q +M+ SR + +HI S ++ I L+P
Sbjct: 206 DTEMDYLTAPQNSYQSLMRKSSR----------KVYNHIAANHSNRIKEIISLVPD--GG 253
Query: 412 DWRDLP 417
+++DLP
Sbjct: 254 NYKDLP 259
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
H + +RV TVRE AR Q FPDS++F G +KQ+GNAVPP +AKAI ++ + N
Sbjct: 292 FHYKYNRVPTVRESARLQSFPDSFIFTGSKTQQFKQVGNAVPPLMAKAIAEKLGDYLSNT 351
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLFSG GG GL + + + S ++ N + I D +
Sbjct: 4 FRILDLFSGAGGFSYGLDSLNEFETLIATDFNESALNTFKRNIPKAETILGD-------I 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K + + ++ + ++++I+ GPPCQGFS + + L+ + N L +L +
Sbjct: 57 TKREVKEQIINKANELKINMIIGGPPCQGFSNKGKKKGLDDPR--NFLFLEYLDIVEKVS 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ I+ENV ++ K + I + M Y++++ VL + ++G+ QSR R +I+A K
Sbjct: 115 PELFIIENVKTMLTAVKGYFIDQIVKKIELMGYKISYGVLNAKDFGIPQSRPRAIIIAHK 174
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY-- 355
+P P P NG S+TVRDAISDL ++ Y
Sbjct: 175 E-MAVP-LPPP-----------NG------------ISVTVRDAISDLAYLNSADGDYES 209
Query: 356 LFHNPPKTHFQRMMKDGS 373
+ N ++ +Q++M+ GS
Sbjct: 210 QYINNAQSEYQKLMRKGS 227
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 480 VLGRLAWDESFDMTGQKNTIIPW----SLVHTASRNNNWQGVLGRLAWDESFDTIVT--- 532
+ +A S D+ + N I P L N + GRL W+ + TI T
Sbjct: 230 LFNHIATKHSVDVINKLNLIPPECGKEYLSEELKGNQKFNTTWGRLKWNTTSSTIDTRFD 289
Query: 533 TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
TP+ G HPE +R +T RE AR Q FPD ++F G ++ KQIGNAVPP LAKAI
Sbjct: 290 TPS----NGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEICKQIGNAVPPLLAKAI 345
Query: 593 GYEIIK 598
G EI++
Sbjct: 346 GLEILR 351
>gi|296814932|ref|XP_002847803.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
gi|238840828|gb|EEQ30490.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
Length = 1099
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 8/239 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK L+LFSG G GL + + W+VE + +Y AN ++ C V L
Sbjct: 639 LKALNLFSGGGTFDRGLEEGTAIQSKWAVEWSLPQMLTYRANHPNGKDLKLFCGSVNDYL 698
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ ++ + + EV +I AG PCQG+ N RE E S + ++ + S+ D ++
Sbjct: 699 FQAIQGNENEYIARIGEVQIISAGSPCQGYCSANFYRENEVSMRNSSMIASVASYIDFYR 758
Query: 238 PKYIILENVTGLV-HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+Y ILENVTG+ ++ L + + M YQ L + ++G QSR+R+ I +
Sbjct: 759 PQYAILENVTGMASRTHEQSPLSQLLCTFVGMGYQARVFNLDAWSFGSPQSRSRLFIAIA 818
Query: 297 KPGYKLPSFPQPLHAFSNQLFTI------NGNLVANKTSHAP-YRSITVRDAISDLPRV 348
PG + + P H+ + NG ++ P + ++ +A DLP +
Sbjct: 819 APGLHMLNHPPLTHSHPDWTKARALGDAPNGLTFGDRRWDTPIFDFVSAHEATKDLPPI 877
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 506 HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFP 564
H+A + R+ ++ F T+ T+ P K G+ LH ++DR++TV+E RAQG+P
Sbjct: 930 HSARLRTPYSKAWSRVHPEKLFPTVTTSVCPFCKFTGRWLHWQEDRLITVQEVRRAQGYP 989
Query: 565 DSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK-CIGN 602
DS V G +K +GN+V +A A+G + + CI N
Sbjct: 990 DSEVLIGSAAQQWKIVGNSVARQIALALGLAVREACIRN 1028
>gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 358
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 66/337 (19%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ------DD 169
+ +DLFSG GGL +G AG ++ + S +++ N + ++ D+
Sbjct: 7 SKFTVIDLFSGAGGLSKGFLDAGF-DVILGIDFDDSALKTFENNHGKAKALKLDLFNLDN 65
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
N ++ + H + +D++V GPPCQGFS + E +K +N L
Sbjct: 66 INYIISEFGREH-----------NTLDVLVGGPPCQGFSLAGKREEDDK---RNMLYKAM 111
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+ + +P+ ++LENV G++ + IF+ K+ Y+++ VL + YGV Q R
Sbjct: 112 VKLAERMKPRAVVLENVPGMLTLYDGAGKKRIFNDFEKLGYKMSVKVLYAPEYGVPQIRK 171
Query: 290 R---VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R V +L SK G+ +FP+P+ + N +T DAI DLP
Sbjct: 172 RAFFVGLLNSKEGF---TFPEPILSSEN--------------------FVTCEDAIGDLP 208
Query: 347 RVS--QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRL 404
+ G + P+T +Q M+ S L ++I I S I L
Sbjct: 209 SLEGIYGDEIQEYECSPQTKYQAEMRKNS----------TKLYNNIGTIHSSKTVKMISL 258
Query: 405 IPSFPNADWRDLPNICVKLPRGQHSYTEKL-KYNAKK 440
+P N ++ LP R + Y E L +Y++KK
Sbjct: 259 VPEGKN--YKALPEEY----RNMYKYNEALTRYHSKK 289
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
H + +R+ TVRE AR Q FPD ++F G + YKQ+GNAVPP L AI
Sbjct: 302 FHYKYNRIPTVRESARLQSFPDDFIFYGNKSEQYKQVGNAVPPKLGYAI 350
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAMGICGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
LK + LFSGCGGL G AGV + +E ++ + Y NF + +D +
Sbjct: 121 LKAISLFSGCGGLCLGFSAAGV-RIAGFIEKDKHISQIYRDNFSSTPQLANDITSLSHKD 179
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
++ + G E+D+++ GPPCQGFS L+ R+ KS +N L +L F +F+
Sbjct: 180 IEQYKDSIG-------EIDIVIGGPPCQGFS-LSGKRD--KSDARNKLFENYLDFVTVFK 229
Query: 238 PKYIILENV---TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
PK +LENV T + N N I I +NY++T+ + + +YGV QSR RV L
Sbjct: 230 PKIALLENVQLLTSMKDENGNHIKDLIIKKFQDLNYKITYFDVNAKDYGVPQSRARVFFL 289
Query: 295 A 295
A
Sbjct: 290 A 290
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
R W+E T+ TT ++ + +HP R LT+RE AR Q FPD +VF G + +
Sbjct: 375 RQVWNEEGSTVQTTFGMISG-CRNVHPVATRSLTIREAARIQSFPDKFVFNGKVGTVRTA 433
Query: 580 IGNAVPPPLAKAIGYEIIKCIGN 602
IGNAVPP L+ Y+I K + N
Sbjct: 434 IGNAVPPLLS----YKIAKYLTN 452
>gi|451853048|gb|EMD66342.1| hypothetical protein COCSADRAFT_179654 [Cochliobolus sativus
ND90Pr]
Length = 1157
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC--- 170
LD L+ L +FSG G L GL + G V+ + + AN + + + C
Sbjct: 612 LDNKLRGLSIFSGGGLLDRGLEEGGAVDFRTIVDFSQHAIRTQQANIKNSTTVCLYCGSV 671
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
N L S LKG T + VD I AG PC FS L + S L L+ TF
Sbjct: 672 NTFLNSALKGDTSF----FARVGAVDFIAAGCPCVAFSGLQQNHLSPSSLLNASLISTFC 727
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
SF DL++P Y +LENV + L + CL+ YQV ++ S NYG Q R+R
Sbjct: 728 SFVDLYRPLYGVLENVLNISSERAGSALSQMVACLVSFGYQVNQYIMDSWNYGSPQRRSR 787
Query: 291 VVILASKPGYKLPSFPQPLH 310
++ + PG L QP H
Sbjct: 788 AILTIAAPG--LQPIMQPYH 805
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 539 KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+ G ++H E+ R ++++E RAQG D+ G I D ++ GN V + AIG +++
Sbjct: 938 RSGAVVHWEESRSISLQEARRAQGIDDTEPIIGTIRDQWRIAGNGVDRKVGFAIGLGLLR 997
Query: 599 CI 600
+
Sbjct: 998 AV 999
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q ++++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLKINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEWLKEFDALIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I++NV L+ K L+ I L + YQ+++ +L + +YGV QSR R I+ +
Sbjct: 115 EIFIIKNVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+W++ + DT TP+ G HPE R +T RE AR Q F D+ +F
Sbjct: 268 FKSTWGRLSWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNNIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++G+
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGSFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD ++++
Sbjct: 211 YLNPIQSNYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 52/309 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ DLF GCGG +G AG +++ + +Y+ NF I +D S
Sbjct: 1 MNVFDLFCGCGGFSKGFQSAGFDIK-LGIDIWQDAITTYNHNFPNAVTITEDI-----SN 54
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LKG +L EVD+I+ GPPCQGFS L+ R ++ + N L +F+ Q
Sbjct: 55 LKGEDLLSRANLTAD-EVDVIIGGPPCQGFS-LSGKRMIDDPR--NILYKSFVRMVSDIQ 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA-S 296
PK ++ENV GLV K ++ + + Y+VT L + +YGV Q+R RV + +
Sbjct: 111 PKIFVMENVPGLVKLFKGKVKDQVIEDFSNLGYEVTLGQLTACDYGVPQARKRVFFVGVN 170
Query: 297 KPGYKLPS---FPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS---- 349
K K FP P H G+ +A +T +DAISDL +
Sbjct: 171 KSKIKHTEKFVFPTPTH----------GDKIA---------YVTCKDAISDLDFIGDTTL 211
Query: 350 -QGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
Q + Y + +Q MM+ N +ELL +H+ I + I L+P
Sbjct: 212 LQEHDAYQI--SAQNEYQVMMRK---------NAKELL-NHVTTIHTEKTRSIIALVPD- 258
Query: 409 PNADWRDLP 417
+++ LP
Sbjct: 259 -GGNYKSLP 266
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 34/57 (59%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
H +RV TVRE AR Q FPD + F G KQ+GNAVPP LA+AI +I I
Sbjct: 299 FHYRANRVPTVRESARIQSFPDDFEFIGIKTSQLKQVGNAVPPLLAQAIATAVIDVI 355
>gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 432
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 20/238 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVE++ A+++ NF V+ C V ++ +
Sbjct: 8 AVDLFAGAGGMTLGFEQAGF-DVLASVEIDPIHCATHEFNFPFWRVL---CKPVEETTSQ 63
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q + E+D++ GPPCQGFS + + R E + N LVF ++ PK
Sbjct: 64 EIRQSSSIG---DREIDVVFGGPPCQGFSLIGK-RSFEDPR--NSLVFHYIRLVLELSPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
+ ++ENV G+ N + I + Y+V + VL + ++GV Q+R R+ IL +
Sbjct: 118 FFVIENVKGMTAGNHQAFIAEIINKFASNGYKVRQKYQVLNAAHFGVPQNRERLFILGCR 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY 355
+LP++P+ + T + H S TV +A+ DLP + + + Y
Sbjct: 178 NDLELPNYPEAI--------TQRAKPKKSGLPHELNLSPTVWEALQDLPEIEKYSELY 227
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 515 QGVLGRL-AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
QG+ L A S T+P P+ HP R +TVRE AR +PD + F
Sbjct: 303 QGICNTLRAGTPSNQGAFTSPRPI-------HPFIPRCITVREAARLHSYPDWFRFHVTK 355
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCI 600
++QIGN+VPP LAKA+ EIIK +
Sbjct: 356 WHGFRQIGNSVPPLLAKAVALEIIKSL 382
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|334821746|gb|AEG90849.1| DNA(cytosine-5)-methyltransferase 1 [Apostichopus japonicus]
Length = 155
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 87/154 (56%), Gaps = 19/154 (12%)
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANK-------TSHAPYRSITVRDAISDLPRVSQG 351
G KLP +P+P H FS + ++ + K ++ PYR+ITVRD++SDLP + G
Sbjct: 1 GEKLPMYPEPQHVFSPRACQLSVVIDDKKIESTIAWSTSPPYRTITVRDSMSDLPPIKNG 60
Query: 352 ANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFP 409
AN + P+T Q+M++ + +L+DHICK +SPL+E R+R IP P
Sbjct: 61 ANKLEISYDGEPQTDSQKMIRGN--------QYQPILRDHICKEMSPLVEARMRHIPLAP 112
Query: 410 NADWRDLPNICVKLPRGQHSYTEKLKYNAKKKKS 443
+DWRDLPNI V L + +KL+Y K++
Sbjct: 113 GSDWRDLPNIEVAL--KDSTKCKKLRYTHSDKRN 144
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLSWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
+ +K LD F+G GG G AG A+ ++E++ ++ N E VI+ D +
Sbjct: 2 SKVKVLDTFAGAGGFSLGFHMAG-AEIIGAIEVDSWATETFKFNHPESLVIKKDISQF-- 58
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ + + + ++ D+I+ GPPCQGFS N+ K +N L FL +
Sbjct: 59 ------SDEEILETFKNNKPDIILGGPPCQGFSIANKKNGDHKDP-RNSLFEEFLRIGRI 111
Query: 236 FQPKYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
P +I+ENV ++ + ++ I L + Y V ++L+S ++GV Q R R+
Sbjct: 112 LSPMVMIMENVPNIIKAKTKDGIFVVDIIKEELSSLGYHVYHNILESTDFGVPQIRKRLF 171
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS--Q 350
I+AS+ K P FP+P H I G+ KT T+ DAISDLP+++ +
Sbjct: 172 IIASRKELKNP-FPKPTH-------NITGSDGLKKTP-------TLWDAISDLPQINARE 216
Query: 351 GANCYLFHNPPKTHFQRMMKDGS 373
G+ + T +Q+ +++ S
Sbjct: 217 GSEEMDYDKQALTDYQKQLRENS 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 20/77 (25%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGG-------------------ICDMYKQIGNA 583
+HP +R T RE AR Q FPD YVF+G +C Y QIGNA
Sbjct: 313 FVHPYLNRNFTAREGARIQSFPDWYVFKGKPTVVSHKLLQREGREDEKYLC-QYNQIGNA 371
Query: 584 VPPPLAKAIGYEIIKCI 600
VPP +AK I I +
Sbjct: 372 VPPLMAKEIALNIFNEV 388
>gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
Length = 380
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 159/382 (41%), Gaps = 63/382 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GGL +G QAG ++ + + +Y N + +++D KS+
Sbjct: 7 VIDLFSGAGGLSQGFVQAGF-DVLAGIDFDDAALRTYGHNIKGAKALKEDLFDEEKSIRD 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+L K+ +D+I+AGPPCQGFS L AR++ S +N L + D F+PK
Sbjct: 66 IEK-----NLANKN-IDVIIAGPPCQGFS-LTGARDINDS--RNKLYVAVVHAVDHFRPK 116
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNY--QVTFDVLQSGNYGVAQSRNRVVILASK 297
++ENV G+ K + Q I + M Y VT L + +YGV Q R R+ + +
Sbjct: 117 AFLIENVPGMATLYKGAVKQQIINTFEDMGYSISVTDKPLLAADYGVPQMRKRMFFVGFR 176
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCY 355
F P S + + DAISDLP + + G
Sbjct: 177 KDLNYDYFEFPKAYLSKDNY------------------VGTADAISDLPSLIDTLGQESV 218
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ P++ +Q++M+ S + +H+ + ++ I +P +++D
Sbjct: 219 PYSKEPQSDYQKLMRKNS----------SCIYNHVATNHTDEVKWVISQVPE--GGNYKD 266
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI-IPWSLVHTASRN 474
LP + ++T +Y+++K D G +N W+ V T N
Sbjct: 267 LPEGVGSSRKFNEAWT---RYHSQKPSRTIDT---------GHRNHFHYKWNRVPTVREN 314
Query: 475 NNWQGVLGRLAWDESFDMTGQK 496
Q ++ + F+ G K
Sbjct: 315 ARLQ------SFPDYFEFLGTK 330
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
H + +RV TVRE AR Q FPD + F G +Q+GNAVPP LA+AIG +++ + N
Sbjct: 301 FHYKWNRVPTVRENARLQSFPDYFEFLGTKTQQNRQVGNAVPPLLAQAIGEKMLLHLENG 360
Query: 604 VPPPLAKAI 612
+K I
Sbjct: 361 FVTKDSKNI 369
>gi|357048861|ref|ZP_09110094.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
gi|355384684|gb|EHG31745.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
Length = 333
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 36/261 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSG GG+ G + +SVE ++ A +Y+ NF ++ D V
Sbjct: 5 KMISLFSGAGGMDLGFEKENFTN-VFSVEFDKKIAKTYEKNFPNNNLFVGDIRDV----- 58
Query: 179 KGHTQHKGVSLPQKHE-VDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K ++ +E VD+++ GPPCQGFS +N L F+ + Q
Sbjct: 59 ----DNKKINELMGNEIVDVVIGGPPCQGFSMAGNIGRKFVDDPRNQLFKEFVRVVNETQ 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV L NK + ++ I K+ Y T+ VLQ+ +YGV Q R R+ I+ +K
Sbjct: 115 PKIFVMENVARLQTHNKGQTIKEIIDEFEKVGYYSTYKVLQAADYGVPQKRQRIFIVGTK 174
Query: 298 -PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
P ++ FP+ ++TV++AI +LP + G +
Sbjct: 175 DPDFEF-KFPEGFGT-----------------------TVTVKEAIGNLPPLKSGEVSNV 210
Query: 357 FHNPPKTHFQRMMKDGSRIHD 377
++ H ++M++ S + D
Sbjct: 211 TNHFAMNHSEQMLEKMSYVSD 231
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
KI H Q+R LT RE AR Q FPD ++F G + +QIGNAVPP LA+ + E+ + +
Sbjct: 270 KIFHYNQNRALTPRELARLQTFPDVFIFEGDSISIQQQIGNAVPPKLAEVVAKEVYRSL 328
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + I D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE R Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREATRIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE R Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREADRIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAKAIGYEIIK 618
G + KQIGNAVP LA A+G I+K + + + A +EIIK
Sbjct: 324 GNKTSVCKQIGNAVPTLLALALGKAILKSLRKMI--QIYHADAFEIIK 369
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAMGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
Length = 424
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 43/320 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF G GGL +GL AG+ + + + A+Y NF +++ D
Sbjct: 7 LTAVDLFCGAGGLSQGLADAGM-HVVAAADHDPDACATYRRNFPRTVLVEGD-------- 57
Query: 178 LKGHTQHKGV-SLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLSFCDL 235
L +H+ + Q ++DL+ GPPCQ +SQ+ N R ++ +N L F+
Sbjct: 58 LTSREKHEALLDALQGSDLDLLAGGPPCQAYSQVRNHDRLIDDP--RNRLYREFVGLLQE 115
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCL-LKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+P+ ++LENV G+ + + I L L+ Y V VL +G++G Q R R+V +
Sbjct: 116 IRPRTLVLENVLGMSQLKGGAVRRQIEQDLSLQGAYDVISGVLDAGDFGTPQRRPRLVFI 175
Query: 295 ASKPGYKL-PSFPQPL-------HAFSNQ----LFTINGNLVANKTSHAPYRSITVRDAI 342
+ + P P+ + S Q LF+++ L T R++TV+ A+
Sbjct: 176 GVRTDIGVAPGLPEGTGLSRALRNGHSGQPTEALFSLDRPLHEVLTDPGDRRAVTVQQAL 235
Query: 343 SDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
SDL + G ++ + P++ +QR M+ S++ QDH + R+
Sbjct: 236 SDL--IEPGD---VYSSRPQSAYQRWMRVKSKVP----------QDHTPSAIREDTRRRL 280
Query: 403 RLIPSFPNADWRDLPNICVK 422
+ IP P + DLP ++
Sbjct: 281 QAIP--PGGNVYDLPEELLR 298
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 545 HPEQDRVLTVREYARAQGFPDSYVF------------RGGICDMYKQIGNAVPPPLAKAI 592
H E R L+VRE AR QGFPD + F G Y+Q+GNAVPPPLA AI
Sbjct: 344 HYEVARGLSVREAARIQGFPDRFHFVTAPKGTPGQLRNGARHSRYRQVGNAVPPPLAAAI 403
Query: 593 GYEIIKCIGNAVPPPLA 609
G + +G P LA
Sbjct: 404 GRSVCDLLGAHDPAELA 420
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 48/304 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LFSG GGL G +G W++++++ +Y N + ++ D +
Sbjct: 5 VVSLFSGGGGLDLGFKNSGF-NIIWAIDIDKDAVLTYKENLGDHIILGDITKI------- 56
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
Q K + E D+++ GPPCQ FS + + R ++ + LV+ +L + +PK
Sbjct: 57 ---QEKDIP-----EADVVIGGPPCQSFSLVGKRRSDDE---RGQLVWQYLRIINEIRPK 105
Query: 240 YIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+ ENV GL E +L + ++ Y+V + VL + +YGV Q R R+ I+ +
Sbjct: 106 CFVFENVVGLKSAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGT 165
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ G K +FP P H K + + I+V +A+ DLP +
Sbjct: 166 REGIKF-NFPLPTH--------------NEKGNDGKLKWISVEEALGDLPSPNTDG-IVK 209
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ P +Q M++ N + + +H LS L +M I IP ++ D+
Sbjct: 210 YSTEPLNPYQLKMREN--------NFDDYVTEHSTPKLSELDKMIIEHIPV--GGNYMDV 259
Query: 417 PNIC 420
P+
Sbjct: 260 PDFV 263
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC-DMY 577
GRL D+ TI T N N G +H ++ R++TVRE R QGFPD+Y + +
Sbjct: 282 GRLRPDKPSYTINTHFNKPN-VGCNIHYKEKRLITVREALRLQGFPDNYKIKSSTKRGKH 340
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+GNAVPP L++AI +++ I
Sbjct: 341 TIVGNAVPPILSQAIANKVLGSI 363
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLSWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|127487|sp|P09795.1|MTS1_SALIN RecName: Full=Modification methylase SinI; Short=M.SinI; AltName:
Full=Cytosine-specific methyltransferase SinI
gi|79032|pir||A32008 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) - Salmonella sp
gi|154350|gb|AAA27212.1| modification methylase (M.SinI) [Salmonella enterica subsp.
enterica serovar Infantis]
Length = 461
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K L FSG GL G+ QAG + + E++++ + +N ++I D + + +L
Sbjct: 76 KALSFFSGAMGLDLGIEQAGF-ETLLASEIDKAARDTILSNRPNMALIGDIRDYTTEDIL 134
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT-FLSFCDLFQ 237
K GVS +E+DLI+ GPPCQ FS + LE + G VF +L +
Sbjct: 135 K----LAGVS--SGNEIDLIMGGPPCQAFSTAGKRLGLEDER---GNVFIKYLDVALDIR 185
Query: 238 PKYIILENVTGLV-----HFNKNE----------------ILQCIFHCLLKMNYQVTFDV 276
PKYI++ENV GL+ H NE +L I + Y V+F++
Sbjct: 186 PKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNL 245
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
S N+GV Q R RV+I+ S+ G ++P F QP H + K + + I
Sbjct: 246 YNSANFGVPQIRERVIIICSRDGSRVP-FLQPTH--------------SEKGEYGLPKWI 290
Query: 337 TVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDG 372
T+R+ I++L ++ + ++ + + R++K+G
Sbjct: 291 TLRETITNLKNIT---HEHVLFPEKRLKYYRLLKEG 323
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G L R+AWD T+VT +P + HP++ R L+V+EY Q FP+ +V +G + D
Sbjct: 350 GFLRRVAWDRPSPTLVT--HPAMPATDLAHPDELRPLSVQEYKVIQQFPEEWVIKGKLLD 407
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+Q+GNAVP L A+G I+
Sbjct: 408 KYRQLGNAVPIGLGLAVGKNIL 429
>gi|417327974|ref|ZP_12113244.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353569160|gb|EHC33822.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
Length = 459
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K L FSG GL G+ QAG + + E++++ + +N ++I D + + +L
Sbjct: 74 KALSFFSGAMGLDLGIEQAGF-ETLLASEIDKAARDTILSNRPNMALIGDIRDYTTEDIL 132
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT-FLSFCDLFQ 237
K GVS +E+DLI+ GPPCQ FS + LE + G VF +L +
Sbjct: 133 K----LAGVS--SGNEIDLIMGGPPCQAFSTAGKRLGLEDER---GNVFIKYLDVALDIR 183
Query: 238 PKYIILENVTGLV-----HFNKNE----------------ILQCIFHCLLKMNYQVTFDV 276
PKYI++ENV GL+ H NE +L I + Y V+F++
Sbjct: 184 PKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNL 243
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
S N+GV Q R RV+I+ S+ G ++P F QP H + K + + I
Sbjct: 244 YNSANFGVPQIRERVIIICSRDGSRVP-FLQPTH--------------SEKGEYGLPKWI 288
Query: 337 TVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDG 372
T+R+ I++L ++ + ++ + + R++K+G
Sbjct: 289 TLRETITNLKNIT---HEHVLFPEKRLKYYRLLKEG 321
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G L R+AWD T+VT +P + HP++ R L+V+EY Q FP+ +V +G + D
Sbjct: 348 GFLRRVAWDRPSPTLVT--HPAMPATDLAHPDELRPLSVQEYKVIQQFPEEWVIKGKLLD 405
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+Q+GNAVP L A+G I+
Sbjct: 406 KYRQLGNAVPIGLGLAVGKNIL 427
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + C + ++ +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGV---CGDITQAAI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 61 K----EKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVGAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQV++ L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQTLNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++G
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGTFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD ++++
Sbjct: 211 YLNPVQSNYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEVVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASH 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K + N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSLKN 355
>gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|408385480|gb|AFU62910.1| site specific DNA modification methylase Dcm [Acidithiobacillus
phage AcaML1]
Length = 449
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 33/249 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWS--VELERSEAA------------SYDANFQEC 163
L C+DLF+GCGGL GL +AG WS +ER A + A+F +
Sbjct: 9 LSCIDLFAGCGGLSLGLKEAG-----WSGLFAIERDPMAFETLSQNFLVPGAPYASFADW 63
Query: 164 SVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN 223
N + +LLK + K + + V +I GPPCQGFS R + + +N
Sbjct: 64 PAWLPKTNHDIVALLKNESVRKHLR-SLRGAVTMIAGGPPCQGFSVGGRR---DGADERN 119
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHF-------NKNEILQCIFHCLLKMNYQVTFDV 276
LV+ L +L +P+ +++ENV G+ + + + L + Y FDV
Sbjct: 120 SLVYQMLDMVELVRPRVVLIENVEGIARRFVARPGEASTSVAESVIERLSDLGYTSIFDV 179
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
L + +GV QSR RVVI+ + P P L A N++ + + V +++
Sbjct: 180 LDASLFGVPQSRRRVVIVGIQ---DCPMSPADLKATFNEMLSKSAVAVRQHWGLHQTKNV 236
Query: 337 TVRDAISDL 345
T ++AI+DL
Sbjct: 237 TAKEAIADL 245
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 16/75 (21%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--------DMYK-- 578
TI T P+ + +H + R +TVRE AR Q FPD++ F G D+ +
Sbjct: 339 TITTHPD------EFIHYAEPRNITVREMARLQSFPDNFHFYGRYTINGPRRKHDVARCS 392
Query: 579 QIGNAVPPPLAKAIG 593
Q+GNAVPP +A+ +G
Sbjct: 393 QVGNAVPPLMAEGLG 407
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLGYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|302866239|ref|YP_003834876.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
gi|302569098|gb|ADL45300.1| DNA-cytosine methyltransferase [Micromonospora aurantiaca ATCC
27029]
Length = 368
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 115/227 (50%), Gaps = 36/227 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+GCGG+ G G +P SVE +R+ A++Y ANF + +D +
Sbjct: 8 LSMIDLFAGCGGMTVGFHNEGF-RPILSVEWDRAAASTYAANFGKEHTRWEDIEKI---- 62
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K +P + D+I+ GPPCQGFS L + +E +N L +L F
Sbjct: 63 -------KDDEIP---DADVIIGGPPCQGFSNLG-TKSVEDP--RNKLWKQYLRFVVKAH 109
Query: 238 PKYIILENVTGLVHFNKNEIL-QCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
P+ ++ENV N+ ++L + H +L+ Y++T VL + +YGV+Q R R +++ S
Sbjct: 110 PQVFVIENVERFSRTNEFQLLMEEADHGILQ-GYKLTAGVLLAADYGVSQRRPRTIVIGS 168
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAIS 343
+ G ++P P+P HA G L P+R TVRDAI
Sbjct: 169 RIG-EIP-LPEPTHA-----KVPTGEL-------RPWR--TVRDAIG 199
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD---------RVLTVREYARAQGFPDSY 567
V+GR+ WD TI T K G+ LHP+ + RV+T E + Q FP Y
Sbjct: 276 VMGRMRWDAPSLTIRTEFFKPEK-GQYLHPQWEPNRPDRRVNRVITHYEASLLQDFPKDY 334
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ G ++ KQIGNAVP LA AI + K +
Sbjct: 335 KWCGSKTEIAKQIGNAVPSGLAAAIARHLKKYL 367
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAMGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAAIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+ TP K +DLFSG GGL G+ +AG A +V+ +Y++NF + D +
Sbjct: 1 MTTP-KVVDLFSGVGGLSLGISEAG-ADVVLAVDNNEKALEAYNSNFPDKITKNLDLSTA 58
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+ + +T G++ K EVD++ GPPCQGFS + + + +N L+ +
Sbjct: 59 DQDDILSNT---GIT---KEEVDIVTGGPPCQGFSVMGKR---DPDDERNNLLLKYAEHI 109
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRV 291
P Y ++ENV GL+ +K E L+ + + Y + VL + +GV Q R RV
Sbjct: 110 SGLSPDYFVMENVKGLMSGDKREFLEEFLNEIRSAGYNIVEPIQVLDAAEFGVPQYRERV 169
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVAN 326
++L + PS+P P + N I G+L N
Sbjct: 170 IVLGYRDTCPKPSYPTPDDSNVNSWDAI-GDLPNN 203
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
+HP R +TVRE AR Q FPD + F +QIGN+VPP LAK IG E+++C
Sbjct: 299 IHPVAPRCITVREAARIQSFPDWFQFSPTKYHGLRQIGNSVPPLLAKCIGDELLEC 354
>gi|421654486|ref|ZP_16094813.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510257|gb|EKK11919.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 307
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GGL GL QAG+ W+ +L +Y N + +++D + + +
Sbjct: 1 MKVVSLFSGAGGLDLGLKQAGL-DIIWANDLYADAVETYKRNIGDHIILEDISKISSEDI 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
E D+IV G PCQGFSQ N R+ + + N L + +
Sbjct: 60 ---------------PECDVIVGGFPCQGFSQANMKRKADDPR--NKLYLEMIRIISDKK 102
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
PKY I ENV G++ +K ++++ I ++NY V++ +L +YGV Q R RV+IL
Sbjct: 103 PKYFIAENVRGILSLDKGKVIEQIVSDFNELNYNVSYSLLNCADYGVPQKRMRVIILG 160
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKIL--HPEQDRVLTVREYARAQGFPDSYVFRG 571
+ G LG D + T K G ++ HP R +TVRE A Q FPD+++F G
Sbjct: 219 FNGHLGHRVVDPKQPSPTITGRGDEKGGVVVLHHPNNKRRMTVRETAAVQSFPDTFIFMG 278
Query: 572 GICDMYKQIGNAVPPPLAKAIGYEIIKC 599
Y+QI NAVPP L +G ++K
Sbjct: 279 TKTSAYRQIANAVPPKLGYVLGKMLLKS 306
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L QK E+++I+ PPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQKLEINMIIGEPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFGSD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD ++++
Sbjct: 211 YLNPIQSNYQALMRKDSPKLYN 232
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ G L W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGHLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|417354684|ref|ZP_12131049.1| DNA-cytosine methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353561049|gb|EHC28103.1| DNA-cytosine methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
Length = 458
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K L FSG GL G+ QAG + + E++++ + +N ++I D + + +L
Sbjct: 73 KALSFFSGAMGLDLGIEQAGF-ETLLASEIDKAARDTILSNRPNMALIGDIRDYTTEDIL 131
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT-FLSFCDLFQ 237
K GVS +E+DL++ GPPCQ FS + LE + G VF +L +
Sbjct: 132 K----LAGVS--SGNEIDLVMGGPPCQAFSTAGKRLGLEDER---GNVFIKYLDVALDIR 182
Query: 238 PKYIILENVTGLV-----HFNKNE----------------ILQCIFHCLLKMNYQVTFDV 276
PKYI++ENV GL+ H NE +L I + Y V+F++
Sbjct: 183 PKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNL 242
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
S N+GV Q R RV+I+ S+ G ++P F QP H + K + + I
Sbjct: 243 YNSANFGVPQIRERVIIICSRDGSRVP-FLQPTH--------------SEKGEYGLPKWI 287
Query: 337 TVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDG 372
T+R+ I++L ++ + ++ + + R++K+G
Sbjct: 288 TLRETITNLKNIT---HEHVLFPEKRLKYYRLLKEG 320
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G L R+AWD T+VT +P + HP++ R L+V+EY Q FP+ +V +G + D
Sbjct: 347 GFLRRVAWDRPSPTLVT--HPAMPATDLAHPDELRPLSVQEYKVIQQFPEEWVIKGKLLD 404
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+Q+GNAVP L A+G I+
Sbjct: 405 KYRQLGNAVPIGLGLAVGKNIL 426
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFNALIGLDCDKQALITFENNHKNAIGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
Length = 413
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ------ECSVIQDDCNL 172
K +DLFSG GGL GL AG +P SVE+ +Y NFQ E +D ++
Sbjct: 93 KFIDLFSGAGGLSCGLVMAGF-EPIASVEIMPDAVETYVYNFQNRKKKEELIETRDIRDV 151
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLS 231
+K L + + K ++DLIV G PCQGFS NR + +N L L
Sbjct: 152 KVKEEL--YNKFKDT------DIDLIVGGFPCQGFSMAGNRVVD----DPRNSLYLEMLE 199
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK++++ENV GL ++ Q I + + YQ+ L S +Y VAQ+R RV
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKRV 259
Query: 292 VILASKPGYKLPSFPQPL 309
+ +A+K K+ FP+P+
Sbjct: 260 IFIANKIN-KINYFPKPI 276
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP+ RVLT RE A Q FPD ++F+G QIGNAVPP LAKAIG+ I
Sbjct: 348 NHGGVNIHPKLPRVLTPRELAALQSFPDDFIFKGSKKWQLVQIGNAVPPLLAKAIGFAIK 407
Query: 598 KCI 600
K +
Sbjct: 408 KSL 410
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSTGLECLKEFDALIGLDCDKQALITFENNHKNAIGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|418166559|ref|ZP_12803215.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211039|ref|ZP_15668023.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|421231707|ref|ZP_15688352.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|353830155|gb|EHE10285.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573762|gb|EJG34349.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|395596197|gb|EJG56419.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
Length = 351
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 54/302 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLL 178
+DLFSG GGL G AG ++ + ++ N Q ++ D N+ + +
Sbjct: 6 IVDLFSGAGGLSYGFEMAGF-NVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDI 64
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K + + ++D+IV GPPCQG S L+ R + + N L +++ QP
Sbjct: 65 K--------PIIGEQKIDIIVGGPPCQGMS-LSGPRRFDDPR--NKLYLSYIRLVREIQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK- 297
++ENV G+V K +I I KM Y+V F VL + +YGV Q+R RV+ + ++
Sbjct: 114 TAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRN 173
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCY 355
G++ P L TI IT AISDLP + G
Sbjct: 174 DGFEYPE----------ALGTI----------------ITTEMAISDLPTLENELGEIEM 207
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ + P+ +Q++M+ S + H+ + H K++S I L+P ++++
Sbjct: 208 SYVSEPQNDYQKLMRKRSNVVLNHVAAK-----HSEKVIST-----IALVPD--GGNYKN 255
Query: 416 LP 417
LP
Sbjct: 256 LP 257
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +RV TVRE AR Q FPD ++F G ++Q+GNAVPP +A+ I ++K + N
Sbjct: 290 FHYKYNRVPTVRESARLQSFPDDFIFYGSKTQQFRQVGNAVPPLMAQQIANNLLKYLKN 348
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 54/324 (16%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PL+ LDLFSGCGGL G AG VE++ A S+ NF ++D +
Sbjct: 17 PLRLLDLFSGCGGLTLGFVSAGCVS-VGGVEIDAHAAESHALNFHP---LKDRSAAPWHA 72
Query: 177 LLKGHTQHKGVSL------PQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLK 222
+ K Q K SL P VD+IV GPPC F+++ RA+ E K +
Sbjct: 73 MSKDILQLKPSSLNHLLKRPPNEGVDVIVGGPPCPAFTRVGRAKLREVFQHPEAFKQDPR 132
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNY 282
L +L + +P +++ENV ++++ + + I L M+Y+ + +L + +Y
Sbjct: 133 ATLYVQYLQYVQALKPLALVMENVPDILNWGGHNLGDEICESLKAMDYRCAYTLLNAASY 192
Query: 283 GVAQSRNRVVILA-SKPGYKLPSFPQPL------HAFSNQLFTINGNLVANKTSHAPY-- 333
V Q R R ++A K PSFP P +S+ N++A + +
Sbjct: 193 DVPQMRERFFLVAVHKETRSDPSFPVPTRKVDFPRGYSSSRNVALKNVLAQSSDKGSWYV 252
Query: 334 ----------RSITVRDAISDLP--------RVSQGA---NCYLFH-NPPKTHFQRMMKD 371
++TV +A++DLP R +GA N + H P + F R+M++
Sbjct: 253 APPAAPANAPPAVTVAEALADLPELTDHLHNRDRRGARHLNGRVPHTTAPHSAFARLMRE 312
Query: 372 GSRIHDIHINLRELLQDHICKILS 395
L+DH+ + L+
Sbjct: 313 WPGFES-----DGFLRDHVTRCLT 331
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
Q RV++VRE AR Q FPD + F G + ++QIGN+VPP LA I E+++ +G
Sbjct: 429 QQRVISVREAARLQSFPDGFRFAGTMNPAFRQIGNSVPPLLAWHIADELLRSLG 482
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVA-KPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L +DLFSG GGL G +AG C ++ + Y NF + N+ +K
Sbjct: 3 LLVVDLFSGAGGLHIGFEKAGFEIGLCIDNDINVEKTHKY--NFPNIPFM----NVDIKE 56
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR--ARELEKSKL---KNGLVFTFLS 231
L ++ + EVD+++ GPPCQGFS + + + LEK +NGL+F ++
Sbjct: 57 LSSDQVRN----IIGNREVDVLIGGPPCQGFSTIGKRVSSNLEKRSSPDPRNGLIFQYIR 112
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+PKY+++ENV GL+ N L + + ++ Y V + VL +YGV Q R RV
Sbjct: 113 LLKDLKPKYLVMENVKGLLTMNGGGDLANAINLIQELGYNVAYKVLNMADYGVPQIRERV 172
Query: 292 VILASKPGYKLPSFPQ 307
+I+ ++ G ++ FP+
Sbjct: 173 IIIGNRLGEEI-DFPE 187
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 26/43 (60%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
+HP R LTVRE AR Q FPDS F G Q+GNAVPP
Sbjct: 283 IHPILHRSLTVREAARIQTFPDSMFFLGNRRQTGHQVGNAVPP 325
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAIGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA +G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALVLGKAILKSL 353
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|170077805|ref|YP_001734443.1| Type II cytosine-5 DNA methyltransferase [Synechococcus sp. PCC
7002]
gi|462645|sp|P34882.1|MTAA_SYNP2 RecName: Full=Modification methylase AquI subunit alpha;
Short=M.AquI subunit alpha; Short=M.AquiA; AltName:
Full=Cytosine-specific methyltransferase AquI subunit
alpha
gi|2126509|pir||I39659 modification methylase AquI, alpha protein - Synechococcus sp. (PCC
7002)
gi|142180|gb|AAA22067.1| M.AquI alpha protein [Synechococcus sp. PCC 7002]
gi|169885474|gb|ACA99187.1| DNA-cytosine methyltransferase [Synechococcus sp. PCC 7002]
Length = 248
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 24/236 (10%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K + LFSG GG+ G AG + +VE + S + N + VI+ D + ++
Sbjct: 4 KLISLFSGAGGMDIGFHAAGFST-AVAVEQDPSCCNTLRLNMPDTPVIEGDITSITTQVI 62
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + E+DL++ GPPCQ FS + ++ + LV FL P
Sbjct: 63 LEAAKVNPL------EIDLVIGGPPCQSFSLAGKRMGMDDP--RGMLVLEFLRVVREALP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIF--------HCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
K ++ENV G+++++K + L+ I + + Y V++ VL + ++GV Q R R
Sbjct: 115 KCFVMENVKGMINWSKGKALEAIMTEASQPIKYAGKEYKYAVSYHVLNAADFGVPQFRER 174
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
V I+ ++ G K FP+P H SNQ I +L + PY+ TV+DAIS LP
Sbjct: 175 VFIVGNRLG-KTFQFPEPTHGPSNQARQI--DLFGKQLK--PYK--TVQDAISTLP 223
>gi|350287792|gb|EGZ69028.1| DNA methyltransferase Dim-2 [Neurospora tetrasperma FGSC 2509]
Length = 1416
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ +DL+ G G GL + GV + W+ ++ +Y AN + + + +L
Sbjct: 802 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTHPFLGSVDDLL 861
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ EVD I AG PC GFS L + +++ LV +F SF D
Sbjct: 862 RLALEGKFSD---NVPRPGEVDFIAAGSPCPGFSLLTQDKKVLNQVKNQSLVASFASFVD 918
Query: 235 LFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV+G+V K ++L +F L+ M YQ + + +G QSR RV
Sbjct: 919 FYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQSRERV 978
Query: 292 VILASKPGYKLPSFPQPLHAF-----SNQLFTING-NLVANKTSHAPYRSITVRDAISDL 345
+ + PG LP P P H+ N F NG + V ++ ++ + +DL
Sbjct: 979 FLYFAAPGLPLPDPPLPSHSHYRVKNRNIGFLCNGESYVQRSFIPTAFKFVSAGEGTADL 1038
Query: 346 PRVSQG 351
P+V G
Sbjct: 1039 PKVGDG 1044
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ T NP + + G LH ++DR TV+E RAQG+ D V G D +K +GN+V
Sbjct: 1124 FPTVTATSNPSDARMGPGLHWDEDRPYTVQEMRRAQGYLDEEVLVGRTTDQWKLVGNSVS 1183
Query: 586 PPLAKAIG 593
+A AIG
Sbjct: 1184 RHMALAIG 1191
>gi|429860368|gb|ELA35108.1| DNA methyltransferase dim-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1133
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ +DLF G G GL + G + W S + + F +
Sbjct: 682 LRGVDLFCGGGNFGRGLEEGGAIEMQWHQRTCYSHRLALEGKFSD--------------- 726
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+P+ VD + AG PC GFS+L + + + LV F SF D ++
Sbjct: 727 ----------KVPKIGTVDFVSAGSPCPGFSRLTVDKATPEQRKNQSLVAAFASFIDTYR 776
Query: 238 PKYIILENVTGLVH--FNKNEILQCIFHC-LLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
P+Y +LENV +V KNE + C C L+ + YQ F +L + +YG QSR+RV +
Sbjct: 777 PRYGLLENVLEIVQPRREKNEDVFCQLICALVGLGYQTHFFLLDAWSYGSPQSRSRVFLC 836
Query: 295 ASKPGYKLPSFPQPLHAFSN---QLFTINGNLVANK------TSHAPYRSITVRDAISDL 345
+ PG+KLP P H+ +L T+ G L ++ P+R I +A +DL
Sbjct: 837 FAAPGHKLPEPPLQSHSHYKPDVRLKTL-GKLPNDEPMGEHLVMPTPFRFIGSEEATADL 895
Query: 346 PRVSQG 351
P + G
Sbjct: 896 PNIIDG 901
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 522 AWDESF-----DTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
AW F T+ T P+P + + G+ILH Q R LTV E RAQGF D V G D
Sbjct: 971 AWSRCFPQQVMQTVTTVPSPADARMGRILHWNQSRTLTVMEARRAQGFLDHEVILGQPKD 1030
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKC-IGNAV 604
++ + N+V ++ A+G + IG+ V
Sbjct: 1031 QWRVVVNSVAKEVSLALGLSFREAWIGSLV 1060
>gi|425448027|ref|ZP_18828008.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9443]
gi|389731291|emb|CCI04644.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9443]
Length = 387
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 114 LDTPLKCL------DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
++ PLK L DLFSG GG+ +GL QAG P S E+ +A++ NF C
Sbjct: 49 VNVPLKPLNSYNFIDLFSGAGGITQGLLQAGF-NPVASAEISPIASATHQKNFPNCHHFC 107
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D + G + P H L+V GPPCQGFS A + + + +N L
Sbjct: 108 GDIHDFNTQEWLGK-----IGNPFIH---LVVGGPPCQGFSV---AGKRDANDPRNHLFQ 156
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQ-VTFDVLQSGNYGVAQ 286
F+ QP Y+++ENV G++ K EI Q I + Y+ ++ +L+S YGV Q
Sbjct: 157 EFIRLVSEIQPWYVVMENVPGILTIKKGEIKQNILEAFQSIGYRNISIAILESAAYGVPQ 216
Query: 287 SRNRVVILASKPGYKLPSFPQP 308
R R + +A++ G P +P P
Sbjct: 217 IRPRAIFIANRFGLPNP-YPSP 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 310 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 369
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLFSG GG GL + + + +S ++ N + +I D + KS
Sbjct: 4 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGD---ITKSE 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K +K L ++++I+ GPPCQGFS + + L+ + N L +L +
Sbjct: 61 VKEQIINKANEL----KINMIIGGPPCQGFSNKGKKQGLDDPR--NFLFLEYLDIVEKVS 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ I+ENV ++ K + I + M Y++++ VL + ++GV Q+R R +I+A K
Sbjct: 115 PELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAIIIAHK 174
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY-- 355
K S P+ NGN TV+DAISDL ++ Y
Sbjct: 175 E--KTISLPRS-----------NGN------------RTTVKDAISDLAYLNSADGNYES 209
Query: 356 LFHNPPKTHFQRMMKDGS 373
+ + ++ +Q+ M+ GS
Sbjct: 210 QYISNAQSEYQKQMRKGS 227
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 511 NNNWQGVLGRLAWDES---FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
N W GRL WD + DT TP+ G HPE +R +T RE AR Q FPD +
Sbjct: 269 NTTW----GRLKWDSTSPTIDTRFDTPS----NGTNTHPELNRAITPREAARLQSFPDKF 320
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+F G ++ KQIGNAVPP LAKAIG EI++
Sbjct: 321 IFTGSKTEICKQIGNAVPPLLAKAIGLEILR 351
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLFSG GG GL + + + +S ++ N + +I D + KS
Sbjct: 5 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGD---ITKSE 61
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+K +K L ++++I+ GPPCQGFS + + L+ + N L +L +
Sbjct: 62 VKEQIINKANEL----KINMIIGGPPCQGFSNKGKKQGLDDPR--NFLFLEYLDIVEKVS 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ I+ENV ++ K + I + M Y++++ VL + ++GV Q+R R +I+A K
Sbjct: 116 PELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAIIIAHK 175
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCY-- 355
K S P+ NGN TV+DAISDL ++ Y
Sbjct: 176 E--KTISLPRS-----------NGN------------RTTVKDAISDLAYLNSADGNYES 210
Query: 356 LFHNPPKTHFQRMMKDGS 373
+ + ++ +Q+ M+ GS
Sbjct: 211 QYISNAQSEYQKQMRKGS 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 511 NNNWQGVLGRLAWDES---FDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
N W GRL WD + DT TP+ G HPE +R +T RE AR Q FPD +
Sbjct: 270 NTTW----GRLKWDSTSPTIDTRFDTPS----NGTNTHPELNRAITPREAARLQSFPDKF 321
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+F G ++ KQIGNAVPP LAKAIG EI++
Sbjct: 322 IFTGSKTEICKQIGNAVPPLLAKAIGLEILR 352
>gi|336467555|gb|EGO55719.1| hypothetical protein NEUTE1DRAFT_67631 [Neurospora tetrasperma FGSC
2508]
Length = 1452
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---DDCNLVL 174
L+ +DL+ G G GL + GV + W+ ++ +Y AN + + + +L
Sbjct: 838 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTHPFLGSVDDLL 897
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ EVD I AG PC GFS L + +++ LV +F SF D
Sbjct: 898 RLALEGKFSD---NVPRPGEVDFIAAGSPCPGFSLLTQDKKVLNQVKNQSLVASFASFVD 954
Query: 235 LFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV+G+V K ++L +F L+ M YQ + + +G QSR RV
Sbjct: 955 FYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQSRERV 1014
Query: 292 VILASKPGYKLPSFPQPLHAF-----SNQLFTING-NLVANKTSHAPYRSITVRDAISDL 345
+ + PG LP P P H+ N F NG + V ++ ++ + +DL
Sbjct: 1015 FLYFAAPGLPLPDPPLPSHSHYRVKNRNIGFLCNGESYVQRSFIPTAFKFVSAGEGTADL 1074
Query: 346 PRVSQG 351
P+V G
Sbjct: 1075 PKVGDG 1080
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ T NP + + G LH ++DR TV+E RAQG+ D V G D +K +GN+V
Sbjct: 1160 FPTVTATSNPSDARMGPGLHWDEDRPYTVQEMRRAQGYLDEEVLVGRTTDQWKLVGNSVS 1219
Query: 586 PPLAKAIG 593
+A AIG
Sbjct: 1220 RHMALAIG 1227
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 36/263 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ LDLF G GG+ G+ + ++++ A ++ N E L++ +
Sbjct: 338 FRILDLFCGAGGMSYGMHKNSHFVTKVALDINEKLAQTFKENIPESE-------LIIGDI 390
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ K ++L +K++V++I+ GPPCQGFS + ++L +N L +L +
Sbjct: 391 QDKAIKEKIINLSKKNKVNMIIGGPPCQGFSL--KGKKLGLDDPRNFLFIEYLHLVQELK 448
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P ++ENV L+ + I + K+ Y+V+ ++++ +YGV Q+R RV+ L SK
Sbjct: 449 PLVFVIENVKSLMSTSNGWFKNQIISEIKKLGYEVSVGIVRASDYGVPQNRERVIFLCSK 508
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCY 355
K S P+P KT+ TVRDAI DL + ++G
Sbjct: 509 N--KAISLPEP---------------TVKKTT-------TVRDAIEDLAYLNSNEGDFEQ 544
Query: 356 LFHNPPKTHFQRMM-KDGSRIHD 377
+ KT +Q++M KD R+++
Sbjct: 545 SYITEAKTEYQKLMRKDSDRLYN 567
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
+P +L+ N+ W GRL WDE TI T + + G HP +R +T+RE AR
Sbjct: 593 LPENLLGKQKFNSTW----GRLKWDEPSPTIDTRFDAAS-NGTNNHPFLNRSITLREAAR 647
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Q F D ++F G D+ QIGNAVPP +AKAI I + + N
Sbjct: 648 IQSFDDRFIFYGNKVDIRTQIGNAVPPLMAKAIADHIYENLVN 690
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAIGICGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVDVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEVVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCTKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD ++++
Sbjct: 211 YLNPIQSNYQALMRKDSPKLYN 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPVQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|342210471|ref|ZP_08703237.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
gi|341579492|gb|EGS29506.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
Length = 600
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LDLF G GG+ GL Q K ++ + +Y N ++ I D L
Sbjct: 7 ILDLFCGAGGISVGLEQISNFKSVIGLDFNKQALETYKFNHKDAIGIHGDITL------- 59
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ + ++L ++ +++IV GP CQGFS N+ + L + +N L ++ +PK
Sbjct: 60 KEVKERIINLSKEKGINMIVGGPSCQGFS--NKGKMLGLNDPRNYLFKEYVEIVKHVKPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
ILENV G++ + I ++ Y++++ VL + ++GV Q+R R +++ S
Sbjct: 118 LFILENVKGMISSENGYFINEIVKSFEELGYKISYKVLNAADFGVPQNRERTILIGSLD- 176
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL--F 357
F N ++ + P TV +AISDL ++ G + +
Sbjct: 177 -----------------FHFNFRILDEFKTKTP----TVYEAISDLSYLNSGEGEEISDY 215
Query: 358 HNPPKTHFQRMMKDGS 373
N P +++Q++M+ S
Sbjct: 216 INEPVSYYQKLMRKNS 231
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 520 RLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
RL W+E + DT TP+ GK HP +R +T RE AR Q FPD ++F G +
Sbjct: 278 RLEWNEPSPTIDTRFDTPS----NGKNTHPILNRAITPREAARLQSFPDDFIFTGTKTSV 333
Query: 577 YKQIGNAVPPPLAKAIGYEIIKC 599
QIGNAVPP LAKAIG IIK
Sbjct: 334 CTQIGNAVPPLLAKAIGLGIIKA 356
>gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136]
gi|189433679|gb|EDV02664.1| DNA (cytosine-5-)-methyltransferase [Bacteroides coprocola DSM
17136]
Length = 387
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 20/267 (7%)
Query: 106 FLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
F+ MP + +DLF+GCGG+ EG +G + + E+++S A+ N + +
Sbjct: 125 FVASLIMPHLRGMNFVDLFAGCGGMSEGFIMSGF-QLIAANEIDKSIMATNRYNHSQYAP 183
Query: 166 IQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+ N +L + + T+ + + V+++V GPPCQGFS A + + +N L
Sbjct: 184 AE---NFILGDITQEETKARIMEACGNTPVNVVVGGPPCQGFSY---AGWRDPNDKRNQL 237
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDV-LQSGNYGV 284
F+ + +P++ ++ENV G++ K + ++ I ++ Y+V + L + +GV
Sbjct: 238 FKDFVEMVNRLRPEFFVMENVPGILTMRKGDAIKEIIEAFTEIGYRVNVPIKLNAEEFGV 297
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
Q R RV I+ S +P P PL + NL +ITVRDAI
Sbjct: 298 PQRRKRVFIIGSLEEISIPQ-PSPLFYMPSVKTPNMWNLPV---------AITVRDAIGS 347
Query: 345 LPRVSQGANCYLFHNPP--KTHFQRMM 369
LP + G P + + R+M
Sbjct: 348 LPELENGGGSLEMDYEPVQASAYDRLM 374
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD+ TI T N + G LHP Q RVL+ RE AR Q FPDS++F+G YK
Sbjct: 54 GRLCWDKPSYTIATYFNRVGN-GCNLHPSQCRVLSNREAARLQSFPDSFIFQGSNASQYK 112
Query: 579 QIGNAVPPPLAKAIGYEII 597
QIGNAVPP LA+ + I+
Sbjct: 113 QIGNAVPPLLARFVASLIM 131
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQTLNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
Length = 582
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D F G GG+ G QAG+ K W+ + S SY ANF C + L
Sbjct: 280 DGFCGAGGVSRGAQQAGL-KLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL------- 331
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
SLP++ VD++ PPCQ FS + + +F+ +L +P+
Sbjct: 332 -----TSLPRELLVDVMHVSPPCQPFSPA-KTIAAAHDEANEACLFSIYRLIELCKPRVA 385
Query: 242 ILENVTGLVHFNKNEI-LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
+E +GL ++ I L I H L+++ Y V + ++ +YGV QSR R++++A+ PG
Sbjct: 386 TMEQTSGLKQ--RHPIWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGE 443
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
+LP FPQP H ++ P +T+ DAIS +P +
Sbjct: 444 ELPPFPQPTH--------------GDEPGKLPL--VTILDAISGIPSTA 476
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAVPPPLAKAIGYEIIK 598
G HP R T+RE A Q FP ++ F C + KQIGNAVPP LA+A+ E++K
Sbjct: 507 GDNFHPSGTRTFTLREAASLQTFPLNHTF----CAPGVMKQIGNAVPPVLARAVFDEVVK 562
Query: 599 CIGNAVPPPLAKA 611
+ N P A
Sbjct: 563 SLRNTDCPATGPA 575
>gi|428314093|ref|YP_007125070.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428255705|gb|AFZ21664.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 431
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 45/244 (18%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG G+ QAG +VE + + NF + V+ D + L
Sbjct: 9 AIDLFAGAGGFSLGIEQAGFDVAV-AVEHDPIHGLVHAFNFPQTKVLCADV-----AQLS 62
Query: 180 GHTQHKGVS---------LPQKHE------VDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
G K V +H+ +DL+ GPPCQGFS + + R+L+ ++N
Sbjct: 63 GQDIQKAVGEWAAKNRQPTGSRHDPLSTIPIDLVFGGPPCQGFSVIGK-RQLDD--VRNT 119
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNY 282
L+F F QP+Y ++ENV GL + IL+ + Y++T VL + N+
Sbjct: 120 LIFEFCRIVKELQPRYFVMENVPGLRMPKYSPILEQLMCEFEAAGYEITEPIQVLNAANF 179
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAI 342
GV Q R R+ +L ++ G ++P+P +P + ITV+DAI
Sbjct: 180 GVPQQRRRLFVLGTQVGLNKLTYPEP-------------------DLRSPSQYITVKDAI 220
Query: 343 SDLP 346
+DLP
Sbjct: 221 ADLP 224
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HPE RV++VRE AR FPD + F ++++GNAVPP LA+A
Sbjct: 334 TSPRPI-------HPEYPRVISVREAARLHSFPDWFRFHITKWHGFREVGNAVPPLLARA 386
Query: 592 IGYEIIKCI 600
+G +I+ +
Sbjct: 387 LGSQILAAL 395
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF+GCGG G AG ++E + + +Y N SVI +D +
Sbjct: 1 MNIIDLFAGCGGFSHGFKMAGY-NSILAIEKDLWASQTYSFNNPNVSVITEDITTLDPGD 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LK +S+ +VD I+ GPPCQGFS L+ R+ + +N L F+ F F
Sbjct: 60 LK-------ISV---SDVDGIIGGPPCQGFS-LSGNRD--QKDPRNSLFVDFVRFVKFFS 106
Query: 238 PKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
PK+ ++ENV G++ ++ + I + Y+V +L + +YGV QSR RV +
Sbjct: 107 PKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFI 166
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
K +PL+ Q+ T ++ ++ + ++ +AISDLP + G
Sbjct: 167 GLKSD-------RPLN---QQILTPPSKVIESEYT-------SLEEAISDLPVIEAGEGG 209
Query: 355 YLFHNP--PKTHFQRMMKDGSRIHDIHINLR 383
+ P P+ +Q M+ GS H+ +R
Sbjct: 210 EVQDYPVAPRNKYQENMRKGSTCVYNHVAMR 240
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM--------YKQIGNAVPPPLAKA 591
Q +HP +R T RE AR Q FPD+Y+F+G M Y+QIGNAVPP LA+A
Sbjct: 302 QSNFIHPFYNRNFTAREGARIQSFPDTYIFQGKRTTMSWEKHLSQYQQIGNAVPPLLAQA 361
Query: 592 IGYEI 596
+ I
Sbjct: 362 LAERI 366
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
G + KQIGNAVPP LA A+G I+K N
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARN 355
>gi|380483902|emb|CCF40335.1| cytosine-specific methyltransferase [Colletotrichum higginsianum]
Length = 1246
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 22/249 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV-----IQDDCNL 172
L+ DLF G G GL +AG W ++ +Y AN I++ L
Sbjct: 716 LRGADLFCGGGNFGRGLEEAGAITMDWCNDMNAKAVHTYVANAGNTVAPFTGPIEELQKL 775
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
L + +P+ +VD + G PC GFS+L + K LV F SF
Sbjct: 776 ALLGTFSDN-------VPEIGQVDFVSGGSPCPGFSRLTSDKTKPKQLKNQSLVAAFASF 828
Query: 233 CDLFQPKYIILENVTGLVH---FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
D ++PKY +LENV G+V K ++ + + ++ + YQ +L S ++G Q+R
Sbjct: 829 IDTYRPKYGLLENVEGIVQPETKKKEDVFRQLICAIVGLGYQTRCFLLDSWSHGAPQTRT 888
Query: 290 RVVILASKPGYKLPSFPQPLHA-FSNQLFTI----NGNLVANKTSHAP--YRSITVRDAI 342
RV + + PG KLP P+ H+ + + + NG + + P + ++ A
Sbjct: 889 RVFLCFAAPGLKLPKVPRHSHSHYKARKLKLGQLSNGQFMIERQLSVPTALKFVSAAAAT 948
Query: 343 SDLPRVSQG 351
+DLP + G
Sbjct: 949 ADLPDIKDG 957
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 484 LAW-DESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQ-G 541
L+W D MT + P R N GR+ + TI T P + G
Sbjct: 996 LSWRDGKGTMTKAERQCFP----DRGRRVNKGSRAFGRVKPSDPMHTITTKSQPSDSSIG 1051
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
KILH Q+R LTV E RAQGF D+ + G D Y+ IGN+V ++ A+G
Sbjct: 1052 KILHWNQNRPLTVMEARRAQGFRDNDIILGNPVDQYQIIGNSVSREVSIALG 1103
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLECLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 55/334 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAG----VAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
+K +D+FSG GGL G G +A W+ +E + +++ I D N
Sbjct: 1 MKIIDIFSGAGGLSLGFESEGFETILAIDKWTDAIE-TFNKNHENKVGTTIDIHDFSNEY 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
L+ G +D I+ GPPCQGFS + + + +N L ++ F
Sbjct: 60 LEQYKDG-------------SIDGIIGGPPCQGFSLVGTR---DTNDPRNSLYIEYVRFV 103
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ +PK+ +LENV+GL+ K + I + Y V + +L + +YGV QSR RV
Sbjct: 104 SVIKPKFFVLENVSGLLSLEKGKFKDDIIKRFEGLGYNVDYKLLTASDYGVPQSRKRVFF 163
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + F ++ F + NL + ++ A+SDLP+ +
Sbjct: 164 VGLRK-----------DVFKDEYFNFD-NLELEEM-------VSTSKALSDLPQATSSKI 204
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ NPP+ +Q+ M+ S + + I K +++ I L+P
Sbjct: 205 GLDYINPPENKYQKYMRKNSNL---------IFNHEITKHTQNTVDI-ISLVPD--GGGI 252
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDC 447
+DLP K+ +++ + N++ S DC
Sbjct: 253 KDLPEEYYKIRNYNNAFK---RMNSQAPSSTIDC 283
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
H ++RV TVRE AR Q FPD Y+F+G Y Q+GNAVPP LA+ I EI I
Sbjct: 289 FHYSENRVPTVRESARIQSFPDWYIFKGSKTSQYTQVGNAVPPLLAQKIAKEIKNTI 345
>gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656]
gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656]
Length = 672
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ + LFSGCGGL G AG P + E +++ A++ AN +I+ D V K
Sbjct: 1 MNIISLFSGCGGLDLGFESAGFNIPV-ANEFDKTIWATFKANHPNTHLIEGDIRQVTKED 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
++ + E+D I+ GPPCQ +S+ + ++ ++ + L F ++ FQ
Sbjct: 60 IEQYIDG---------EIDGIIGGPPCQSWSEAGSLKGIKDARGQ--LFFDYIRILKEFQ 108
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ +E +Q I + Y V+F ++ + +YGVA+ R RV + +
Sbjct: 109 PKFFLAENVSGMLANRHSEAVQNILNLFDGAGYDVSFTLVNAKDYGVAEERKRVFYIGFR 168
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ FP+ ++ + IT+RD I DL + +
Sbjct: 169 KDLNIDFGFPKG-------------------STKEDDKKITLRDIIWDLQDTAVPSGEKN 209
Query: 357 FHNP 360
HNP
Sbjct: 210 HHNP 213
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI-GNAV 604
R +T+RE AR QGFPD++ F YK IGNAVP LA I I K + GN+
Sbjct: 281 RRMTIREVARVQGFPDNFKFIYEDTNTAYKMIGNAVPVNLAYEIAVAIKKYLEGNSA 337
>gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
Length = 622
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D F G GG+ G QAG+ K W+ + S SY ANF C + L
Sbjct: 320 DGFCGAGGVSRGAQQAGL-KLSWAFDKSESAINSYRANFPSCLTKHSEVAQFL------- 371
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
SLP++ VD++ PPCQ FS + + +F+ +L +P+
Sbjct: 372 -----TSLPREILVDVMHVSPPCQPFSPA-KTIAAAHDEANEACLFSIYRLIELCKPRVA 425
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
+E +GL + L I H L+++ Y V + ++ +YGV QSR R++++A+ PG +
Sbjct: 426 TMEQTSGLKQRHP-VWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEE 484
Query: 302 LPSFPQPLHA 311
LP FPQP H
Sbjct: 485 LPPFPQPTHG 494
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAVPPPLAKAIGYEIIK 598
G HP R T+RE A Q FP ++ F C + KQIGNAVPP LA+A+ E++K
Sbjct: 547 GDNFHPSGTRTFTLREAASLQTFPLNHTF----CAPGVMKQIGNAVPPVLARAVFDEVVK 602
Query: 599 CIGN 602
+ N
Sbjct: 603 SLRN 606
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 15/246 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVL 174
L+ +DL+ G G GL + GV + W+ ++ +Y AN + + + +L
Sbjct: 840 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTNPFLGSVDDLL 899
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ L+G ++P+ EVD I AG PC GFS L + +++ LV +F SF D
Sbjct: 900 RLALEGKFSD---NVPRPGEVDFIAAGSPCPGFSLLTQDKKVLNQVKNQSLVASFASFVD 956
Query: 235 LFQPKYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
++PKY +LENV+G+V K ++L +F L+ M YQ + + +G QSR RV
Sbjct: 957 FYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQSRERV 1016
Query: 292 VILASKPGYKLPSFPQPLHAF-----SNQLFTING-NLVANKTSHAPYRSITVRDAISDL 345
+ + PG LP P P H+ N F NG + V ++ ++ + +DL
Sbjct: 1017 FLYFAAPGLPLPDPPLPSHSHYRVKNRNIGFLCNGESYVQRSFIPTAFKFVSAGEGTADL 1076
Query: 346 PRVSQG 351
P++ G
Sbjct: 1077 PKIGDG 1082
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 527 FDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
F T+ TT NP + + G LH ++DR TV+E RAQG+ D V G D +K +GN+V
Sbjct: 1162 FPTVTTTSNPSDARMGPGLHWDEDRPYTVQEMRRAQGYLDEEVLVGRTTDQWKLVGNSVS 1221
Query: 586 PPLAKAIG 593
+A AIG
Sbjct: 1222 RHMALAIG 1229
>gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII; M.HaeIII) [Campylobacter concisus 13826]
gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Campylobacter concisus 13826]
Length = 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 38/297 (12%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL-- 178
+DLF+G GG+ EG Q G +EL++ + + +++ N + + +
Sbjct: 7 IDLFAGAGGMAEGFYQEGYM-ALTHIELDKYACLTLQERMRHYGYHENEINKIKPTDITD 65
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE--LEKSKLKNGLVFTFLSFCDLF 236
K ++ + ++D+I+ GPPCQ FS +AR+ K +N L +L+ + F
Sbjct: 66 KNIISIIESNIGKTSDIDVIIGGPPCQSFSSHGKARDPFSMKKDPRNYLYENYLNILNYF 125
Query: 237 QPKYIILENVTGLV--HFNKNEILQCIFHCLLKMNYQVTFD----VLQSGNYGVAQSRNR 290
+PK+ + ENV+G++ I++ IF +K NY + + +L + ++GV Q R R
Sbjct: 126 KPKFFVFENVSGILSTKIKGKSIIKDIFDG-MKKNYNIIENKDMILLNAVDFGVPQDRKR 184
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV-- 348
++I+ ++ L P+ ++ ++L I L + TVRDAISDLP++
Sbjct: 185 IIIIGTRKD--LSINPKSIY---DELKNITKKL----------KKTTVRDAISDLPKLKP 229
Query: 349 SQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLI 405
S+G F+ K+ + ++++ N LL HI + + L R RL+
Sbjct: 230 SEGMQTVNFNPTNKSSYLKLIRQ---------NNYNLLHGHIARNHNELDRKRYRLM 277
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 503 SLVHTASR--NNNWQGVLGRLAWDESFDTIVTTPNPLNKQG-KILHPE--QDRVLTVREY 557
SL+H R NN++ +D TI+ L K G + +HP+ Q+R +T RE
Sbjct: 293 SLIHIKKRLFNNSY----CVQNYDAPSKTIIAH---LYKDGNQFIHPDYTQERSITPREA 345
Query: 558 ARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
AR Q FPD +VF I YKQIGNAVPP ++K I
Sbjct: 346 ARLQSFPDDFVFPCSITQQYKQIGNAVPPLMSKYIA 381
>gi|423314738|ref|ZP_17292671.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
gi|392681485|gb|EIY74843.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
Length = 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P +DLF+GCGGL EG Q G + +A+ ++ N S
Sbjct: 132 PFLDSYNIVDLFAGCGGLSEGFIQNGFN----LLAANEFDASVFETNILNHSKYASVDKF 187
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+L ++ K T+ K ++VD+I+ GPPCQGFS A + + +N L F+
Sbjct: 188 ILGNITKDETKQKIYEACGDNKVDVILGGPPCQGFSY---AGWRDPNDQRNQLFRDFVDI 244
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDV-LQSGNYGVAQSRNRV 291
+PK+ ++ENV G++ K E ++ I Y V + L + +YGV Q R RV
Sbjct: 245 VTTLKPKFFVMENVPGILTMRKGEAIKEIIQAFADAGYHVGTPLKLTAADYGVPQKRKRV 304
Query: 292 VILASKPGYKLPSFPQPLHAFS-NQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
+++ ++ P+PL N LF + + ITVR+AI P +
Sbjct: 305 ILIGCSENIEIYQ-PEPLFTDKPNGLFPLP-------------QYITVREAIGSFPAIPD 350
Query: 351 GA 352
G
Sbjct: 351 GG 352
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WD+ TI T N + G LHPEQ RV++ RE AR Q FPD ++F G +YK
Sbjct: 54 GRLRWDKPSYTINTFFNRV-PNGCNLHPEQMRVMSTREAARFQSFPDDFIFVGKKSGIYK 112
Query: 579 QIGNAVPPPLAKAI 592
QIGNAVPP LA+ I
Sbjct: 113 QIGNAVPPLLARMI 126
>gi|417996763|ref|ZP_12637038.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
gi|410534759|gb|EKQ09397.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
Length = 337
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF+GCGGL EGL QAG+ ++VEL+ + Y+ N + +I D +
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGITVK-YAVELDPRISKIYEGNHHKTIMINSDIRRISDDD 61
Query: 178 LK--GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR-ARELEKSKLKNGLVFTFLSFCD 234
+ GH VD++ PPCQGF+Q+NR + S +N L+ +L
Sbjct: 62 FRRMGH-------------VDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVK 108
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ +P +I++ENV ++++++ + L ++ Y + F + ++G+ QSR R+V++
Sbjct: 109 IIKPNFIMMENVPQIIYYDR---FNSMLEELKEIGYSIDFKEINVKDFGIPQSRRRLVLI 165
Query: 295 AS 296
+
Sbjct: 166 GA 167
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 502 WSLVHTASRNNNWQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYA 558
W H + N + V GR+ WD TI +P+ +G+ LHP Q+R ++VRE +
Sbjct: 235 WLECHKKA-NIGYSDVYGRMFWDRPSPTITGGCLSPS----KGRFLHPTQNRSISVREAS 289
Query: 559 RAQGFPDSYVFRGGI--CDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Q FP Y F + + IGNA+PP AK G I + I N
Sbjct: 290 ILQSFPIDYYFDDKCPKTILAQMIGNAIPPKFAKIQGLYIKEMIEN 335
>gi|427732148|ref|YP_007078385.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427368067|gb|AFY50788.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 397
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ +GL QAG + SVE+ +A++ NF C C + + K
Sbjct: 63 VDLFCGAGGITQGLVQAGF-QALASVEISPIASATHQRNFPHCHHF---CGDIEQFYPKS 118
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
Q G EV+L+V GPPCQGFS A + + +N L + F+ +P Y
Sbjct: 119 WLQQIGYP-----EVNLVVGGPPCQGFS---VAGKRDPKDPRNRLFYEFVRVVSEIRPWY 170
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV G++ + Q I + Y V+ +L+S +YGV Q R R + +A++ G
Sbjct: 171 VVMENVPGILTIQNGNVKQAIIEAFESIGYPHVSVAILESADYGVPQIRPRAIFIANRFG 230
Query: 300 YKLP 303
P
Sbjct: 231 MPNP 234
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 311 NHGGTHIHPYLNRVISSREMARLQSFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 370
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFT 318
P H + + T
Sbjct: 522 LPTHEVAKKFNT 533
>gi|224031943|gb|ACN35047.1| unknown [Zea mays]
Length = 329
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 149/350 (42%), Gaps = 78/350 (22%)
Query: 268 MNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN---LV 324
M YQ ++ +G YG+ Q R RV + + LP +P P + + N +V
Sbjct: 1 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 60
Query: 325 ANKTSHAPY--RSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMK-------DGS 373
A + P +++ + DA SDLP+V Q + + PKT FQR ++ D S
Sbjct: 61 AYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWS 120
Query: 374 RIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEK 433
+ + +LL ++ + E R++ IP A++RDL + V G ++ E
Sbjct: 121 FGEEAGPDEGKLLDHQPLRLNNDDYE-RVKQIPVKKGANFRDLKGVKV----GANNVVE- 174
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
D + S G K + +++ ++ GRL WDE+
Sbjct: 175 -----------WDPEVERVYLSSG-KPLVPDYAMSFIKGKSLK---PFGRLWWDET---- 215
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
+P T+VT P N+ ILHP Q RVLT
Sbjct: 216 ------VP---------------------------TVVTRAEPHNQ--VILHPTQARVLT 240
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
+RE AR QGFPD Y G I + Y Q+GNAV P+A+A+GY C+G A
Sbjct: 241 IRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGY----CLGQA 286
>gi|425440258|ref|ZP_18820564.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9717]
gi|389719334|emb|CCH96802.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9717]
Length = 387
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 114 LDTPLKCL------DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
++ PLK L DLFSG GG+ +GL QAG P S E+ +A++ NF C
Sbjct: 49 VNVPLKPLNSYNFIDLFSGAGGITQGLLQAGF-NPVASAEISPIASATHQKNFPNCHHFC 107
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D + +TQ + + L+V GPPCQGFS A + + + +N L
Sbjct: 108 GDIH-------DFNTQEWLAKIGNPF-IHLVVGGPPCQGFSV---AGKRDANDPRNHLFQ 156
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQ 286
F+ QP Y+++ENV G++ K EI Q I + Y ++ +L+S YGV Q
Sbjct: 157 EFIRLVSEIQPWYVVMENVPGILTIKKGEIKQNILEAFQSIGYGNISIAILESAAYGVPQ 216
Query: 287 SRNRVVILASKPGYKLPSFPQP 308
R R + +A++ G P +P P
Sbjct: 217 IRPRAIFIANRFGLPNP-YPSP 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 310 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 369
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + I D +
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFSALIGLDCDKQALNTFENNHKNAVGICGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K +++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIELAKKLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S++V++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVSVQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD ++++
Sbjct: 211 YLNPIQSNYQALMRKDSPKLYN 232
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++G GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKGTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
Length = 413
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE++ A ++ NF D + ++
Sbjct: 7 AIDLFAGCGGMSLGLEAAGFDV-VAAVEIDPVHALVHEVNFPYGVTFCRDIRHLQWPEMR 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ +G S ++DL+ GPPCQGFS + + R+L + N L+F ++ QPK
Sbjct: 66 QAIERRGYS---TADIDLLTGGPPCQGFSVMGK-RQLGDPR--NQLIFEYVRLLRDIQPK 119
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV-TFDVLQSGNYGVAQSRNRVVILASKP 298
Y I ENV GL +L+ + L + Y V VL +YG Q R R+++L +
Sbjct: 120 YFIFENVQGLTGQRHQGMLKQLCQSLGEAGYHVLPPQVLNGADYGAPQRRKRLILLGYRR 179
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
++P P H APY +TV +AI+DL + +
Sbjct: 180 DVPSVAYPAPSHG----------------PGLAPY--VTVHEAIADLETIPVFTDIDRGI 221
Query: 359 NPPKT--HFQRMMKDGSR-IHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
PP+ F R + + R H H+ L H+ P ++ R R P
Sbjct: 222 VPPEPLGTFGRSLHEQFRHCHSRHLE-PNFLWGHLGSQHQPEIQARFRATP 271
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H + R +++RE AR FPD + F + +++IGNAV P LA+
Sbjct: 305 TAPRPI-------HYQLPRCISIREAARLHTFPDWFQFHRKVWHGFREIGNAVLPLLAQK 357
Query: 592 IGYEIIKCI 600
I EII +
Sbjct: 358 IAQEIIHTL 366
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
LP V + GPPCQG S NR R E KN + FL D +P Y+++ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
L+ F+K + + + MNYQ ++ +G+YG+ Q RNRV + A++P KLP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 307 QPLHAFSNQLFT 318
P H + + T
Sbjct: 522 LPTHEVAKKFNT 533
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 33/267 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ DLFSG GG EGL AG+ + +R +Y N + ++ D L
Sbjct: 371 LRFADLFSGVGGFTEGLKSAGL-DCILGADFDRYAVEAYRKNHTDHECLEAD-------L 422
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR-------ELEKSKLKNGLVFTFL 230
QH ++ +VDL+V GPPCQGFS + R ++ + K +N LVF F
Sbjct: 423 SDEEIQHNIAMRLKEQKVDLVVGGPPCQGFSIFGKRRFVNTKNHQISEDK-RNNLVFAFA 481
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
+ + K+ I+ENV G++ E ++ I + Y+ V+ + +YGV Q R R
Sbjct: 482 NIVIKSEAKWFIMENVPGILSAQNGEYVKAIQEFFAENGYRTECKVINAADYGVPQLRKR 541
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
+++ +K +P FP+P + FS + PYR TV + I+DL +
Sbjct: 542 FLLIGTKTDLVIP-FPKPKY-FSTP-----------DSWQLPYR--TVGEVITDL--MDP 584
Query: 351 GANCYLFHNPPKTHFQRMMKDGSRIHD 377
+ L H+ P H +++ S I +
Sbjct: 585 SSYDLLSHHVPAKHAPTIVERYSYIEE 611
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L + LF+G GGL G +AG + ++ + +Y N+ ++D +
Sbjct: 8 LNFISLFTGAGGLDIGFKEAG-HNCLLASDIMKEAELTYSYNYPSVPFFREDIRQIPLDK 66
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K K EVD+I+ GPPCQGFS + S +N L ++S + F+
Sbjct: 67 FKKVIGDK--------EVDVIIGGPPCQGFSNMGNK---NSSDPRNYLFENYVSLVNTFK 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK + ENV GL+ + + I + L + Y +++ ++ S YGV Q R RV ++ ++
Sbjct: 116 PKCFLFENVKGLLTMFEGRFFENIVNSFLSIGYSISYTLIDSSLYGVPQKRERVFLMGTR 175
Query: 298 PGYKLPSFPQP 308
+K +FP+P
Sbjct: 176 LQHKKFNFPKP 186
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
N+ V RL + TIV N +HP +R LTVRE AR Q FPD Y F G
Sbjct: 636 NFSHVYKRLDRKKPSSTIVPGHNAFP-----VHPVLNRTLTVREAARIQTFPDHYQFVGP 690
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
I + Q+GNA P +A+ G + I N
Sbjct: 691 IINQCLQVGNAFPCLVAQIFGERLRTVINN 720
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
R N+ RL TIV N L +HP R LT RE AR Q FPD+++F
Sbjct: 251 RRKNFGNTYTRLDRKTISSTIVPGNNALP-----VHPYLARSLTPREAARIQTFPDNFIF 305
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
+G +GNAVPP LA + I K I +
Sbjct: 306 KGDRRSQCILVGNAVPPLLAAKLADSIEKFISDV 339
>gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
Length = 644
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D F G GG+ G QAG+ K W+ + S SY ANF C + L
Sbjct: 281 DGFCGAGGVSRGAQQAGL-KLSWAFDKSESAINSYRANFPSCLAEHSEVAQFL------- 332
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
SLP++ VD++ PPCQ FS + + +F+ +L +P+
Sbjct: 333 -----TSLPRELLVDVMHVSPPCQPFSP-AKTIAAAHDEANEACLFSIYRLIELCKPRVA 386
Query: 242 ILENVTGLVHFNKNEI-LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
+E +GL ++ I L I H L+++ Y V + ++ +YGV QSR R++++A+ PG
Sbjct: 387 TMEQTSGLKQ--RHPIWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGE 444
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
+LP FPQP H ++ P +T+ DAIS +P
Sbjct: 445 ELPPFPQPTH--------------GDEPGKLPL--VTILDAISGIP 474
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
Length = 342
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 164/386 (42%), Gaps = 75/386 (19%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L D FSGCGGL +G +AG K +V+ E + ++ NF++ K+L
Sbjct: 2 LSVNDFFSGCGGLSQGFKEAGF-KIQVAVDKEEAFLKTFSHNFKDSQT---------KNL 51
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
G ++ +L + D+I+AGPPCQGFS + R ++ + N L + L
Sbjct: 52 DLGDSK----TLNDIPKSDIIIAGPPCQGFS-ITGPRNIDDPR--NKLYLSVFETLKLTN 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV GL + + I Y VT +L S +YGV Q R+RV I+ K
Sbjct: 105 PKAFVVENVRGLKTMWGGNVFKEIIKKFESAGYIVTESLLNSADYGVPQIRHRVFIVGIK 164
Query: 298 PGY-KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG---AN 353
K FP+P F + IT +AI +LP + G +N
Sbjct: 165 KELNKKFEFPKP--EFDKDDY------------------ITCGEAIGNLPSLENGELKSN 204
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
Y + P T++Q + D ++I+ +H + ++ I L+P ++
Sbjct: 205 DY--NEKPTTNYQMYVMDSNKIY-----------NHEATLHKQFVKDTIALVPE--GGNY 249
Query: 414 RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTI-IPWSLVHTAS 472
+DLP + + ++T +Y++KK D G +N W+ V T
Sbjct: 250 KDLPKGVGESRKFNEAWT---RYHSKKPSRTIDT---------GHRNHFHYKWNRVPTIR 297
Query: 473 RNNNWQGVLGRLAWDESFDMTGQKNT 498
N Q ++ +SF+ G K +
Sbjct: 298 ENARLQ------SFKDSFEFLGTKTS 317
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
H + +RV T+RE AR Q F DS+ F G Q+GNAVPP LA I E+ K +
Sbjct: 286 FHYKWNRVPTIRENARLQSFKDSFEFLGTKTSQNVQVGNAVPPLLAFKIAKELKKFL 342
>gi|417847800|ref|ZP_12493761.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
gi|339456198|gb|EGP68791.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
Length = 351
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLL 178
+DLFSG GGL G AG ++ + ++ N Q ++ D N+ + +
Sbjct: 6 IVDLFSGAGGLSYGFEMAGF-NVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDI 64
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K + + ++D+IV GPPCQG S L+ R+ + + N L +++ +P
Sbjct: 65 K--------PIIGEQKIDIIVGGPPCQGMS-LSGPRKFDDPR--NKLYLSYIRLVREIKP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK- 297
++ENV G+V K +I I KM Y+V F VL + +YGV Q+R RV+ + ++
Sbjct: 114 TAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRN 173
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCY 355
G++ P L TI IT AISDLP + G
Sbjct: 174 DGFEYPE----------ALGTI----------------ITTEMAISDLPTLENELGEIEM 207
Query: 356 LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
+ + P+ +Q++M+ S + H+ + H K++S I L+P ++++
Sbjct: 208 SYVSEPQNDYQKLMRKRSNVVLNHVAAK-----HSEKVIST-----IALVPD--GGNYKN 255
Query: 416 LP 417
LP
Sbjct: 256 LP 257
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +RV TVRE AR Q FPD ++F G ++Q+GNAVPP +A+ I ++K + N
Sbjct: 290 FHYKYNRVPTVRESARLQSFPDDFIFYGSKTQQFRQVGNAVPPLMAQQIANNLLKYLKN 348
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LDLF G G GL G + W+ + + +Y AN + + +
Sbjct: 809 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSI-DDM 867
Query: 178 LKGHTQHK-GVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ Q K ++P +VD I G PC GFS L + + LV F SF DL+
Sbjct: 868 QRFAIQGKFAENVPPVGDVDFISGGSPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFIDLY 927
Query: 237 QPKYIILENVTGLVH---FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+P+Y +LENV G++ ++ + ++ + YQ F L + + G Q R+RV +
Sbjct: 928 RPRYGLLENVPGIIQSKATRDQDVFSQLICAIVGLGYQTQFSFLDASSCGSPQRRSRVFV 987
Query: 294 LASKPGYKLPSFPQPLHAFSNQL------FTINGNLVANKTS--HAPYRSITVRDAISDL 345
+ + PG+ LP P HA T G+ +A + P+ ++ R A + L
Sbjct: 988 VFAAPGHHLPQRPHITHAHPEHTRNYGLGSTPTGDPMAERIMPIATPFDFVSARAATAGL 1047
Query: 346 PRV 348
P V
Sbjct: 1048 PPV 1050
>gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818]
Length = 584
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 109 KFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
+ P+P D F G GG+ G QAG+ K W+ + S SY ANF C
Sbjct: 269 RGPVPHKRRYTFGDGFCGAGGVSRGAQQAGL-KLLWAFDKWESAINSYRANFPSCLAEHS 327
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
+ L SLP++ VD+I PPCQ FS + + +F+
Sbjct: 328 EVAQFL------------TSLPREILVDVIHVSPPCQPFSPA-KTIAAAHDEANEACLFS 374
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
+L +P+ +E +GL + L I H L+++ Y V + ++ +YGV QSR
Sbjct: 375 IYRLIELCKPRVATMEQTSGLKQRHP-VWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSR 433
Query: 289 NRVVILASKPGYKLPSFPQPLHA 311
R++++A+ PG +LP FPQP H
Sbjct: 434 CRLILIAAGPGEELPPFPQPTHG 456
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAVPPPLAKAIGYEIIK 598
G HP R T+RE A Q FP ++ F C + +QIGNAVPP LA+AI E++K
Sbjct: 509 GDNFHPSGTRTFTLREAASLQTFPLNHAF----CAPGVMRQIGNAVPPVLARAILDEVVK 564
Query: 599 CIGNAVPPPLAKA 611
+ N P A
Sbjct: 565 SLRNTDCPATGPA 577
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDTLIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIK 598
G + KQIGNAVPP LA A+G I+K
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILK 351
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDTLIGLDCDKQALITFENNHKNATGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q +++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 59 --EIKEKVIKLAQTLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQV++ +L + +YGV Q+R R ++ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQILNAKDYGVPQNRERAFVVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLSWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA +G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALVLGKAILKSL 353
>gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
Length = 226
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 37/236 (15%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF-QECSVIQDDCNL 172
++ L + LFSG GGL G QAG W+ + ++ +Y N +EC
Sbjct: 2 MNKKLTVISLFSGAGGLDLGFKQAGF-NLIWANDFDKDAVETYKENIGKEC--------- 51
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR-ELEKSKLKNGLVFTFLS 231
+L T+ +P D+++ G PCQGFS N R EL++ +N L ++
Sbjct: 52 ----VLGDITKIPSSEIPN---ADVMIGGFPCQGFSMANTKRHELDE---RNSLYLEYVR 101
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK + ENV G++ K EI++ I Y V + +L + +YGV Q+R RV
Sbjct: 102 ILKAKQPKVFVAENVKGILSLGKGEIIKAIIQDFSDAGYSVEYKLLNAADYGVPQTRQRV 161
Query: 292 VILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
+I+ + + FP+ H + NGN R +++++AIS LP
Sbjct: 162 IIVGIRKDLDIQFEFPKQTH-------SKNGN-------DGLKRWVSIKEAISHLP 203
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + C + ++ +
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNAIGV---CGDITQAAI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K K + L Q +++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 61 K----EKVIKLAQTLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ ++DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 116/262 (44%), Gaps = 34/262 (12%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
DC L +K ++ + K + LP +VD+I GPPCQG S NR R ++ KN +
Sbjct: 458 DCPLKIKEFVQEGYRRKILPLP--GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQM 515
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
TF+ +PKY+++ENV ++ F + + L+ M YQ ++ +G YG+ Q
Sbjct: 516 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQ 575
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R RV + + P LP +P P H + N V N H P +
Sbjct: 576 FRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSVNN---HQPNEVME--------- 623
Query: 347 RVSQGANCYLFHNPPKTHFQRMMK-------DGSRIHDIHINLRELLQDHICKILSPLME 399
+ + PKT FQR ++ D S +L +LL DH L+
Sbjct: 624 ----------YGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLL-DHQPLKLNKDDH 672
Query: 400 MRIRLIPSFPNADWRDLPNICV 421
R++ IP A++RDL + V
Sbjct: 673 ERVQQIPVKKGANFRDLKGVRV 694
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSTGLGYLKEFDALIGLDCDKQALITFENNHKNAISVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++G+
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGSFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|363580908|ref|ZP_09313718.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 346
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF GCGGL +G AG P ++ + +++ N ++ I D L L +
Sbjct: 7 VIDLFCGCGGLSQGFIDAGYKIPL-GIDKWKDAIETFNFNHKDSKGIVADL-LELNPVT- 63
Query: 180 GHTQHKGVSLPQK-HEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
VS +K EVD+I+ GPPCQGFS + R +E + N L TF++F + F+P
Sbjct: 64 -------VSENEKIDEVDVIIGGPPCQGFSIAGK-RIIEDER--NQLYKTFVNFVEHFKP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K ++ENV ++ I I + Y+V+ +L + +YGV Q+R R + K
Sbjct: 114 KAFLMENVPNIMSMGNGVIRNQIIKDFENLGYKVSHQILLASDYGVPQNRKRAFFVGLKN 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR--VSQGANCYL 356
G + FP P P IT +AISDL V+ G YL
Sbjct: 174 GSEF-KFPIPT---------------------TPNNKITSEEAISDLTEHTVNDGT-PYL 210
Query: 357 FHNPPKTHFQRMMKDGSRI 375
+ K+ FQ+ M++G++
Sbjct: 211 --DKYKSSFQKQMRNGNKF 227
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 34/53 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
H E +RV TVRE AR Q FPD ++F+ YKQ+GNAVPP LAK + I
Sbjct: 290 FHYEFNRVPTVRESARIQSFPDDFIFQCSKTSQYKQVGNAVPPVLAKVLAETI 342
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ LDLF G GG GL ++ ++ +++ + + + D +
Sbjct: 4 RILDLFCGAGGFSAGLENLKEFDALIGLDCDKQALITFENHKKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L Q EV++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QAEIKEKVIKLAQTLEVNMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV QSR R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTP-NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
++ GRL ++ + DT + TP N N HPE R +T R+ AR Q + D+Y+F
Sbjct: 268 FKSTWGRLNGNKVSPTIDTRLDTPSNATNS-----HPELHRSITPRKAARIQSYSDNYIF 322
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+ +
Sbjct: 323 YGNKTSVCKQIGNAVPPLLALALGKAILTSL 353
>gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
Length = 402
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 52/282 (18%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN-------------FQECSVIQ 167
+D+F+GCGGL GL AG + ++VE + + N F + S
Sbjct: 7 IDIFAGCGGLSLGLHNAG-WQGLFAVEKNADAFKTLEYNLIKKVNHFLWPDWFPKTS--- 62
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D N+VLK +K L + +VDL+V GPPCQGFS R +E ++ +N LV
Sbjct: 63 HDINVVLKD-------YKEQLLGLQQKVDLVVGGPPCQGFSMAGRRKENDQ---RNNLVK 112
Query: 228 TFLSFCDLFQPKYIILENVTGL-VHFNKN-----EILQCIFHCLLKMNYQVTFDVLQSGN 281
+++ F QPK I ENV G + F KN E + L + Y V +++ G
Sbjct: 113 SYIKFIKTIQPKIIFFENVKGFTLEFKKNKDKGKEYSSYVERALNRAGYYVKGELVNFGE 172
Query: 282 YGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVR-- 339
YG+ Q R R +++ + P ++Q F++ N N+ S + +T+
Sbjct: 173 YGIPQKRTRFILVGVR-----KDVPNVSKDTASQFFSLIKN---NRHSFLSEKKLTIETT 224
Query: 340 --DAISDLPRVSQGANC-------YLFHNPPKTHFQRMMKDG 372
DAISDL R + + ++P K+ +Q++M+ G
Sbjct: 225 LGDAISDLLRENGEVDSPDTKSFKAGMYSPIKSSYQQLMRIG 266
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD----------MYK 578
TI T P+ +H + R+LTVREYAR Q FPD Y+F+G Y
Sbjct: 327 TITTLPDDY------IHYSEPRILTVREYARIQSFPDWYIFQGKYTTGGKRRTQEVPRYT 380
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
QIGNA+PP + +G + K I
Sbjct: 381 QIGNAIPPLFGEQVGIILKKMI 402
>gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524]
Length = 397
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLLK 179
+DLF G GG+ +GL QAG + SVE+ +A++ NF C D KS L+
Sbjct: 63 VDLFCGAGGITQGLVQAGF-QALASVEISPIASATHQRNFPHCHHFWGDIEQFYPKSWLQ 121
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ P EV+L+V GPPCQGFS A + + +N L + F+ +P
Sbjct: 122 Q------IGYP---EVNLVVGGPPCQGFS---VAGKRDPKDPRNRLFYEFVRVVSEIRPW 169
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKP 298
Y+++ENV G++ + Q I + Y V+ +L+S +YGV Q R R + +A++
Sbjct: 170 YVVMENVPGILTIQNGNVKQAIIEAFESIGYPHVSVAILESADYGVPQIRPRAIFIANRF 229
Query: 299 GYKLP 303
G P
Sbjct: 230 GMPNP 234
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 311 NHGGTHIHPYLNRVISSREMARLQSFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 370
>gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae]
Length = 293
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 38/261 (14%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF-QECSVIQDDCNL 172
++ L + LFSG GGL G QAG W+ + ++ +Y N +EC
Sbjct: 1 MNKKLTVISLFSGAGGLDLGFKQAGF-NLIWANDFDKDAVETYKENIGKEC--------- 50
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR-ELEKSKLKNGLVFTFLS 231
VL + K + + D+++ G PCQGFS N R EL++ +N L ++
Sbjct: 51 VLGDITK-------IPSSEIPNADVMIGGFPCQGFSMANTKRHELDE---RNSLYLEYVR 100
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK + ENV G++ K EI++ I Y V + +L + +YGV Q+R RV
Sbjct: 101 ILKAKQPKVFVAENVKGILSLGKGEIIKAIIQDFSDAGYSVEYKLLNAADYGVPQTRQRV 160
Query: 292 VILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
+I+ + + FP+ H + NGN R +++++AIS LP
Sbjct: 161 IIVGIRKDLDIQFEFPKQTH-------SKNGN-------DGLKRWVSIKEAISHLPD-PD 205
Query: 351 GANCYLFHNPPKTHFQRMMKD 371
G N N + ++ + +D
Sbjct: 206 GENADSVPNNEYSQYKVITRD 226
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ LDLF G GG GL K ++ ++ ++ N + I C + + +
Sbjct: 4 RILDLFCGAGGFSAGLEHLKDFKTLIGLDFDKQALNTFQNNHKNAVCI---CGDITEQEI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K +L ++++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 61 KSQVVQHAKNL----KINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I + YQ+++ +L + +YGV QSR R I+ ++
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKAKFHALGYQLSYQILNAKDYGVPQSRERAFIVGARH 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + N + P +S++V++AISDL + ++GA
Sbjct: 175 ------------------FSFDFNCL------EPLKSVSVKEAISDLAYLNSNEGAFESS 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++++Q +M KD +R+++
Sbjct: 211 YLNPIQSNYQALMRKDSTRLYN 232
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F DSY+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDSYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSICKQIGNAVPPLLALALGKAILKSM 353
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 52/301 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI-QDDCNLVLKSLL 178
+DLFSG GGL G AG ++ + ++ N Q ++ D N+ + +
Sbjct: 6 IVDLFSGAGGLSYGFEMAGF-NVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDI 64
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K + + ++D+IV GPPCQG S L+ R+ + + N L +++ QP
Sbjct: 65 K--------PIIGEQKIDIIVGGPPCQGMS-LSGPRKFDDPR--NKLYLSYIRLVREIQP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++ENV G+V K +I I KM Y+V F VL + +YGV Q+R RV+ +
Sbjct: 114 TAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFV---- 169
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ--GANCYL 356
G + F P L TI IT AISDLP + G
Sbjct: 170 GTRNDEFEYP-----EALGTI----------------ITTEMAISDLPTLENELGEIEMS 208
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDL 416
+ + P+ +Q++M+ S + H+ + H K++S I L+P ++++L
Sbjct: 209 YVSEPQNDYQKLMRKRSNVVLNHVAAK-----HSEKVIST-----IALVPD--GGNYKNL 256
Query: 417 P 417
P
Sbjct: 257 P 257
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
H + +RV TVRE AR Q FPD ++F G ++Q+GNAVPP +A+ I ++K + N
Sbjct: 290 FHYKYNRVPTVRESARLQSFPDDFIFYGSKTQQFRQVGNAVPPLMAQQIANNLLKYLKN 348
>gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQDDCNLVLK 175
+ LDLFSGCGGL G AG + SVE++ A S+ NF Q +I+ V +
Sbjct: 23 RVLDLFSGCGGLSLGFHSAGY-EIAASVEIDELAARSHAINFYKGQAPELIERQA--VAR 79
Query: 176 SLLK----GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELE--------KSKLKN 223
+ K T G+ P K DLIV GPPCQ ++++ RA+ E K +
Sbjct: 80 DITKIDPDDLTSDLGLG-PSKLAFDLIVGGPPCQAYARVGRAKLREVAEHPQAFKIDPRA 138
Query: 224 GLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
L +L + + QP +++ENV ++++ + I Q I L M Y+ + +L S ++G
Sbjct: 139 NLYLRYLHYVERLQPIALLMENVPDILNYGGHNIGQEIVEALDAMGYEARYSLLNSAHHG 198
Query: 284 VAQSRNRVVILA 295
V Q R+RV +LA
Sbjct: 199 VPQMRDRVFLLA 210
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAV 604
Q RV+TVRE AR Q FPD +VF G + ++QIGNAVPP +A+ + E++K +G A+
Sbjct: 428 QGRVITVREAARLQSFPDGFVFAGTMNPAFRQIGNAVPPVMARQLAMEMMKTLGEAL 484
>gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1]
gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1]
Length = 341
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 11 PMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI--- 66
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
K P+ E+D I+ GPPCQ +S+ R ++ ++ + L F ++
Sbjct: 67 --------KEEDFPE--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSK 114
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QPK+ + ENV+G++ N +Q + Y VT + + +YGVAQ R RV +
Sbjct: 115 QPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGF 174
Query: 297 KPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ ++ SFP+ G+ V NK IT++D I DL
Sbjct: 175 RKDLEIKFSFPK-------------GSTVENKD------KITLKDVIWDL 205
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 288 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
>gi|390440060|ref|ZP_10228415.1| DNA (Cytosine-5-)-methyltransferase [Microcystis sp. T1-4]
gi|389836547|emb|CCI32539.1| DNA (Cytosine-5-)-methyltransferase [Microcystis sp. T1-4]
Length = 408
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 21/260 (8%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
L +P +DLFSG GGL G AG P + ++ER +Y N ++ D +
Sbjct: 138 LGSPGIFVDLFSGAGGLALGFKWAGWL-PVIANDIERIAIETYAKNVDSSVIVGDIQDPE 196
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIV-AGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+ S + + V+ + L V GPPCQGFS +R ++ + N L +
Sbjct: 197 ISSKI---SSMANVARQLNPDAKLFVLGGPPCQGFSTAGNSRSMQDGR--NSLFRNYTQI 251
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
L P + ENV GL++ + + + I L + Q++ L + NYG+ Q R RV+
Sbjct: 252 ITLINPDGFVFENVMGLLNMEQGRVFEQIKMVLESVTDQLSVWKLDTANYGIPQRRKRVI 311
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQ 350
++ K +L P P+ + G+ N P ++T +A+SDLP + SQ
Sbjct: 312 LVGLK--QQLQILPPPV---------VTGDSTENGLIDLP-SAVTTYEALSDLPPLESSQ 359
Query: 351 GANCYLFHNPPKTHFQRMMK 370
+ PP T +Q +M+
Sbjct: 360 DGESLDYIFPPATDYQELMR 379
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Q RV++ RE AR Q FPD +VF G + QIGNAVPP L GY+I +G+
Sbjct: 90 QHRVISQREAARLQSFPDDFVFLGSRTAINTQIGNAVPPLL----GYQIALHLGS 140
>gi|390961650|ref|YP_006425484.1| hypothetical protein CL1_1491 [Thermococcus sp. CL1]
gi|390519958|gb|AFL95690.1| hypothetical protein CL1_1491 [Thermococcus sp. CL1]
Length = 400
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 115/271 (42%), Gaps = 45/271 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAG----VAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
+DLFSG GGL G AG + W L+ +Y N + D +
Sbjct: 21 TVDLFSGAGGLSLGFDMAGFDVALGLDAWEDALK-----TYRMNHPSSIPLLADARKITG 75
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+K + KG P L++ GPPCQGFS A + + + +N LV+ FL
Sbjct: 76 RDIKNKLREKGFDDPV-----LVIGGPPCQGFSY---AGKRDPNDERNNLVWHFLRLVHE 127
Query: 236 FQPKYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
Y ++ENV+GL+ E + + + + Y+ +L + N+ V Q R RV+
Sbjct: 128 LDVDYFVMENVSGLLTMKTPEGDSVPEKVLERAEEYGYKTNIKLLNAVNFWVPQHRRRVI 187
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
IL S K PS +PL +TVRD ISDLP A
Sbjct: 188 ILGS--SLKAPSHLKPLTKI----------------------PLTVRDGISDLP-TPTPA 222
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLR 383
+ + +PP+ +Q +M+ GSR HI R
Sbjct: 223 DPQSYAHPPERPYQEVMRVGSRFIYNHIPTR 253
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 520 RLAWDESFDTIVTTPNPL---NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
RL W+E P P+ N +HPE+ RV+T RE AR Q FPD++ F G +
Sbjct: 281 RLKWNE--------PAPVMKENHNAPAVHPEEHRVITPREMARLQSFPDAFRFLGTKSSI 332
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
KQIGNAVPP LA I ++ +
Sbjct: 333 LKQIGNAVPPILAYFIARHVMTIM 356
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF-----QECSVIQDDCNL 172
+K +DLF+G GG AGV + ++E +++ A +Y NF + ++ +D NL
Sbjct: 3 VKAIDLFAGAGGFTLSAHNAGV-EVVAAIEFDKAAANTYKKNFILKDKKPIKLLNEDINL 61
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
V + L+ K E+DLI+ GPPCQGFS +R + +N L+ + F
Sbjct: 62 VDPTGLRESLNLKA------GELDLILGGPPCQGFST-HRINNAGVNDPRNALLLRYFEF 114
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYGVAQSRNRV 291
FQPK ++ENV GL+ + L K Y++TF +L + ++GV Q+R RV
Sbjct: 115 VHEFQPKAFLVENVAGLLWKRHEDFLNKFLQLAAKEGYEITFCGILNAKDFGVPQNRKRV 174
Query: 292 VILASKPGYK-LPSFPQPLHAFS 313
I + K SFP FS
Sbjct: 175 FIHGVRKDIKSTVSFPPEATHFS 197
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 511 NNNWQG---VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
+N ++G V GR+ + +TI T N +K G+ +HP ++ +T+R AR Q FPD +
Sbjct: 295 SNGYKGHKDVYGRIFIHQPSNTITTGCNNPSK-GRFVHPWKNHGMTLRHAARFQTFPDDF 353
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
VF G + KQIGNAVPP L + +I
Sbjct: 354 VFYGSSTEQAKQIGNAVPPLLGNVLISDI 382
>gi|110643908|ref|YP_671638.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 315
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 30/230 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GGL G AG + W+ +++ +Y N + ++VLK L
Sbjct: 2 MKVVSLFSGAGGLDLGFKNAGF-QIVWANDIDSDAVLTYKKNIGD--------HIVLKDL 52
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + + + D+++ G PCQGFSQ N R K +N L FL + +
Sbjct: 53 SQ-------IDMDDIPDCDVVIGGFPCQGFSQANLLRN--KDDERNQLYLEFLRVVNAKK 103
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ ENV G++ + ++ I + Y+V + +YGV Q R RV+I+ +
Sbjct: 104 PKFFFAENVRGILSLDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVR 163
Query: 298 PGYKLPS-FPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
K+ +PQP H+ + ++KT AP+ I++ DA+ D+P
Sbjct: 164 DDIKVEYIYPQPTHSSPKK---------SDKTGLAPW--ISIGDALHDIP 202
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
TI+ N I HP+ R ++VRE A Q FP Y F G + Y+Q+GNAVP
Sbjct: 239 TILARGNGKGGVCAIQHPKNHRRMSVRESAIIQTFPLDYEFIGSMTSCYRQVGNAVPVLF 298
Query: 589 AKAIG 593
A+ +
Sbjct: 299 AELLA 303
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + C + ++ +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAMGV---CGDITQAAI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K K + L Q EV++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 61 K----EKVIKLAQTLEVNMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ +++AISDL + ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNIQEAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 211 YLNPIQSSYQALMRKDSPKLYN 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
G + KQIGNAVPP LA A+G I+K N P
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNP 359
>gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
Length = 387
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ +GL QAG P S E+ +A++ NF C D +
Sbjct: 62 IDLFSGAGGITQGLLQAGF-NPVASAEISPIASATHQKNFPNCHHFCGDIH-------DF 113
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+TQ + + L+V GPPCQGFS A + + + +N L F+ QP Y
Sbjct: 114 NTQEWLAKIGNPF-IHLVVGGPPCQGFS---VAGKRDANDPRNHLFQEFIRLVSEIQPWY 169
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV G++ K EI Q I + Y ++ +L+S YGV Q R R + +A++ G
Sbjct: 170 VVMENVPGILTIKKGEIKQNILEAFQSIGYGNISIAILESAAYGVPQIRPRAIFIANRFG 229
Query: 300 YKLPSFPQP 308
P +P P
Sbjct: 230 LPNP-YPSP 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 310 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 369
>gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis]
Length = 357
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 143 CWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGP 202
+SVE++++ ++ NF + V DD ++ T+ K V L + E+DL+V GP
Sbjct: 27 LFSVEIDKAAVRTHLENFPDIPVFDDD--------IRNLTKEKMVELTKNSEIDLVVGGP 78
Query: 203 PCQGFSQLNRARELE------KSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE 256
PCQGFS + R + K +N LV+ F+ +PKY +ENV G + +K
Sbjct: 79 PCQGFSVFGKRRFINTQGYNPKEDDRNKLVYEFIRVVRELKPKYFFMENVKGFLSLDKGL 138
Query: 257 ILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ 315
++ + + Y ++ + V + +YGV Q R R++++ ++ G + FP+P H+ +
Sbjct: 139 FVEEVIKEFKSLGYDKIEYKVFCAADYGVPQKRYRMLMIGNRLGQDI-IFPEPTHSENPS 197
Query: 316 LFTINGNLVANKTSHAPYRSITVRDAISDL 345
L SH PY+ TV AI DL
Sbjct: 198 LL-----------SH-PYK--TVGQAIMDL 213
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 513 NWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
N+ + RL + +T+V N +HP +R LTVRE AR Q FPD++VF G
Sbjct: 270 NYSHIYKRLHRELPSNTLVPGHNAFP-----IHPTLNRTLTVREAARIQTFPDTHVFFGT 324
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIK 598
Q+GNAVPP +AK +E IK
Sbjct: 325 RQQQCIQVGNAVPPLMAKPF-FEQIK 349
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 109 KFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
KF T LDLFSG GG G+ + + +++ ++ N + ++
Sbjct: 340 KFMKTETTDFIVLDLFSGAGGFSYGIEKNEHFRTAIALDFNEQALQTFKHNMPDTEIVHG 399
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
D + + + +SL ++ +V++++ GPPCQGFS + ++L + +N L
Sbjct: 400 D-------ITDSAVKERIISLSKEKKVNMVIGGPPCQGFSL--KGKKLGLNDPRNFLFLE 450
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
+L+ P+ I+ENV L+ + I + +M Y V + VL S +YGV Q R
Sbjct: 451 YLNIVSEINPQVFIIENVKALLSTSAGWFKDQIVQRVEEMGYTVRYGVLNSADYGVPQLR 510
Query: 289 NRVVILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
R + + SK +P P+P A K + TVRDAI DL
Sbjct: 511 QRAIFICSK---DIPIELPKP---------------TAKKVT-------TVRDAIFDLAY 545
Query: 348 VSQGANCYL--FHNPPKTHFQRMMKDGSR 374
++ G + + P + +Q M+ G++
Sbjct: 546 LNSGEGAFEQDYTTQPSSDYQTKMRKGAK 574
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGI 573
+ G GRL WDE TI T + + G HP +R +T RE AR Q F D +VF G
Sbjct: 614 FSGTWGRLKWDEPSPTIDTRFDA-SSNGTNNHPFLNRAITPREAARLQSFDDKFVFIGPK 672
Query: 574 CDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ +QIGNAVPP +AKA+ +I I
Sbjct: 673 LYIRQQIGNAVPPLMAKALADKIYDVI 699
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 36/254 (14%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ LDLF G GG GL Q K ++ E++ +++ NF++ I D +
Sbjct: 3 RILDLFCGAGGFSYGLEQNKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGD-------IT 55
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K V+L ++ +V++++ GPPCQGFS + + L + +N L +L + P
Sbjct: 56 NKEVKDKVVNLAKELKVNMVIGGPPCQGFSL--KGKNLGLADERNFLFLEYLELVEKVNP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L + + I + M Y V +L + +YGV Q+R RV +A K
Sbjct: 114 EIFIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKHYGVPQNRERVFFIAHKE 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL-- 356
+L SFP+ SN L ++V+DAISDL + G
Sbjct: 174 --RLLSFPKE----SNCL-------------------VSVKDAISDLNYLESGEGTIQAE 208
Query: 357 FHNPPKTHFQRMMK 370
+ P++ +Q++M+
Sbjct: 209 YKIEPQSDYQKIMR 222
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 519 GRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
GRL WD+ + DT TP+ GK HP R +T RE AR Q F D++ F+G
Sbjct: 269 GRLVWDDVSPTIDTRFDTPS----NGKNSHPVLHRAITPREAARIQSFDDNFYFKGTKTQ 324
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCI 600
+ KQIGNAVPP LAKA+ II I
Sbjct: 325 VCKQIGNAVPPLLAKALADNIINQI 349
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHEEVQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRS-ITVRDAISDLPRVSQGA 352
+ + L SF Q H H P ++ +++DA+ DLP + G
Sbjct: 162 VGA-----LKSFKQKFHF------------------HKPIKTHFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDDYKFCGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|456873390|gb|EMF88765.1| DNA (cytosine-5-)-methyltransferase [Leptospira santarosai str.
ST188]
Length = 350
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 36/236 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LD F G GGL GL AG+ K +++E SY+ N + I NL ++++
Sbjct: 3 ALDFFCGAGGLTRGLKNAGI-KVLAGIDVENKCKESYEFNNKGSRFI----NLDIRNIGI 57
Query: 180 GHTQHKGVSLPQKHEVDLIVAG-PPCQGFSQLNRARELEKSKLKNG-LVFTFLSFCDLFQ 237
+ G++ KH DL++AG PCQ FS+ R R S++ + L+ F L +
Sbjct: 58 KELEDVGIT---KHTKDLLIAGCAPCQPFSKHQRKR----SRMPDATLLSEFGRVVKLVE 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+I++ENV GL + + L K+ Y+ +D+L + +GV QSR R+V+LASK
Sbjct: 111 PKFILIENVPGLSKVKGYNTFKRFVNSLEKLGYKYDYDILDAKYFGVPQSRRRLVLLASK 170
Query: 298 P-GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
KLP N +F T P+R TVRDAI P + G+
Sbjct: 171 EVDIKLP----------NPIFG---------TESKPFR--TVRDAIGRFPDILAGS 205
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 512 NNWQG---VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
N ++G V GR++WD+ T+ L+ G+ HPEQ+R +++RE A Q FPD+YV
Sbjct: 250 NGFKGHTDVYGRMSWDQPAPTLTGRCISLS-NGRYGHPEQNRAISLREAASLQSFPDNYV 308
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
F G + +QIGNAVP LA+ +G I+K
Sbjct: 309 FFGSQISIAQQIGNAVPVKLAEVLGKTILK 338
>gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505]
gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505]
Length = 364
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 133/306 (43%), Gaps = 51/306 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVA-KPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
++ LDLF+G GGL G A + +VE++ AASY A F + V +
Sbjct: 6 IRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTEVY---AGAIQDW 62
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L +G ++P VD++V GPPCQGFS L + R+ E ++ N L +
Sbjct: 63 LAEG-------TIPTG--VDVVVGGPPCQGFSTLGK-RDAEDAR--NRLWEQYAQVIQRA 110
Query: 237 QPKYIILENVTGLVHFNKN----EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+PKY ++ENV F K+ + L +Y F VL + +YG Q+R R V
Sbjct: 111 RPKYFVVENVPA---FGKSPQYRDFLAATGPGEFLEDYSFDFRVLNAADYGAPQARRRAV 167
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
++ + +P FP+P H+ G+L PYR TVR + +P +Q
Sbjct: 168 LIGHRYDMAVPGFPEPTHSPDG-----GGDL-------PPYR--TVRQTLLGVP--AQPD 211
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
F Q + GSR + REL H+ + SP R IP +
Sbjct: 212 MDERFD-------QLRTRVGSRRVPGAFSPREL---HVSRGYSPKSRERFAAIPE--GGN 259
Query: 413 WRDLPN 418
DLP+
Sbjct: 260 RADLPD 265
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
V+GRL WD TI T K G+ LHP ++R +T E A QGFPD++ F G +
Sbjct: 282 VMGRLHWDRPSVTIRTEFFKPEK-GRYLHPVENRAITHYEAALLQGFPDTHRFIGSRTSI 340
Query: 577 YKQIGNAVPPPLAKAIGYEII 597
+QIGNAVP PL AI +++
Sbjct: 341 ARQIGNAVPIPLGAAIARQVL 361
>gi|421080042|ref|ZP_15540976.1| Cytosine-specific methyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401704895|gb|EJS95084.1| Cytosine-specific methyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 436
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 50/276 (18%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K L FSG GL G+ QAG + + E++++ + +N + ++I D + + +L
Sbjct: 51 KALSFFSGAMGLDLGIEQAGF-ETLLACEIDKAARDTILSNKPDMALIGDIRDYTTEDIL 109
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT-FLSFCDLFQ 237
K GVS +E+DLI+ GPPCQ FS + LE + G VF +L +
Sbjct: 110 K----LAGVS--SGNEIDLIMGGPPCQAFSTAGKRLGLEDER---GNVFIKYLDVALDIR 160
Query: 238 PKYIILENVTGLV-----HFNKNE----------------ILQCIFHCLLKMNYQVTFDV 276
PKYI++ENV GL+ H NE +L I + Y V+F++
Sbjct: 161 PKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKNAGYSVSFNL 220
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
S N+GV Q R RV+I+ S+ G ++P F QP H + K + + +
Sbjct: 221 YNSANFGVPQIRERVIIICSRDGSRVP-FLQPTH--------------SEKGEYDLPKWL 265
Query: 337 TVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDG 372
T+R+ I++L ++ + ++ + + R++K+G
Sbjct: 266 TLRETITNLKDIT---HEHVLFPEKRLKYYRLLKEG 298
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G L R+AWD T+VT +P + HP++ R L+V+EY Q FP+ +V +G + D
Sbjct: 325 GFLRRVAWDRPSPTLVT--HPAMPATDLAHPDELRPLSVQEYKVIQQFPEEWVIKGKLLD 382
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+Q+GNAVP L A+G I+
Sbjct: 383 KYRQLGNAVPIGLGLAVGKNIL 404
>gi|441515984|ref|ZP_20997765.1| putative cytosine-specific methyltransferase [Gordonia amicalis
NBRC 100051]
gi|441449235|dbj|GAC55726.1| putative cytosine-specific methyltransferase [Gordonia amicalis
NBRC 100051]
Length = 363
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF+GCGG+ G AG +P SVE AA+Y ANF E D + K
Sbjct: 2 VDVIDLFAGCGGMTAGFSAAGDYQPVLSVEFNLHAAATYAANFGEDHTFYGDIAEINKK- 60
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+PQ D+++ GPPCQGFS L +R++ +N L +L + +
Sbjct: 61 ----------QIPQ---ADVVIGGPPCQGFSNLG-SRDINDP--RNQLWREYLRVVGVAK 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK ++ENV + ++ ++L Y +++ L + +YGVAQ R R +++ S+
Sbjct: 105 PKVFVIENVDRFMKSSEFQLLLKEAEDGSLAKYDLSYGHLNAADYGVAQRRIRTIVIGSR 164
Query: 298 PG-YKLPSF-----PQP---LHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
G +LP+ P+P L ++ I G + P S +P V
Sbjct: 165 VGKIELPAATHARNPEPGSGLQPWNGTRTRIEGLPPTPAITSLP--SSKTEFFGETVPGV 222
Query: 349 SQGANCYLFHNPPKTHFQR 367
+ A+ ++ NP K QR
Sbjct: 223 FKAADLHIGRNPTKLSLQR 241
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD--------RVLTVREYARAQGFPDSYV 568
V+GR+ WD TI T K G LHP+ D R +T E AR QGFPD +
Sbjct: 273 VMGRMRWDFPSHTIRTEFYKPEK-GAYLHPQWDARGRNRVNRPITHLEAARLQGFPDDFE 331
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ G ++ +QIGNAVP LA AI I
Sbjct: 332 WCGSKIEIARQIGNAVPIGLASAIAEHI 359
>gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS]
Length = 1040
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQ 167
P+ L+ L+LF G G GL + + W+VE + +Y AN +E + +
Sbjct: 525 PLEAKRKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFR 584
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLV 226
+ L ++G L Q V+ I AG PCQG+S N +R+ K L+N ++
Sbjct: 585 GSVDDFLAVAIRGQRSDLVAKLGQ---VEFISAGSPCQGYSLAN-SRKGNKVSLRNSSMI 640
Query: 227 FTFLSFCDLFQPKYIILENVTGLVH--FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ ++ D ++P+Y ILENV + +N + Q I + + YQ+ L + +YG
Sbjct: 641 ASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQLIC-AFVGLGYQLRLMHLDAWSYGA 699
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHA 311
QSR+R+ +L + PG +LP P H+
Sbjct: 700 PQSRSRLFLLIAAPGLQLPEHPALTHS 726
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
TI T +P K G+ LH +DR+LT+ E RAQG+PDS V G +K +GN+V
Sbjct: 848 TITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGNSVARQ 907
Query: 588 LAKAIGYEI 596
+A A+G I
Sbjct: 908 VALALGLSI 916
>gi|29350162|ref|NP_813665.1| cytosine-specific methyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 402
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 39/247 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE----------CSVIQDDC 170
+D+F+GCGGL GL AG + ++VE + + N E D
Sbjct: 7 IDIFAGCGGLSLGLHNAG-WQGLFAVEKNADAFKTLEYNLIEKVNHFLWPDWLPKTSHDI 65
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
N+VLK +K L + +VDL+V GPPCQGFS R +E ++ +N LV +++
Sbjct: 66 NVVLKD-------YKEQLLGLQRKVDLVVGGPPCQGFSMAGRRKENDQ---RNNLVKSYI 115
Query: 231 SFCDLFQPKYIILENVTGL-VHFNKN-----EILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
F QPK I ENV G + F KN E + L + Y V +++ G YG+
Sbjct: 116 KFIKTIQPKIIFFENVKGFTLEFRKNKDKGKEYSSYVERALNRAGYYVKGELVNFGEYGI 175
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVR----D 340
Q R R +++ + P ++Q F++ N N+ S +++T+ D
Sbjct: 176 PQKRTRFILVGVR-----KDVPNVSKDTASQFFSLIKN---NRHSFLSKKNLTIETTLGD 227
Query: 341 AISDLPR 347
AISDL R
Sbjct: 228 AISDLLR 234
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD----------MYK 578
TI T P+ +H + R+LTVREYAR Q FPD Y+F+G Y
Sbjct: 327 TITTLPDDY------IHYSEPRILTVREYARIQSFPDWYIFQGKYTTGGKRRTQEVPRYT 380
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
QIGNA+PP + +G + K I
Sbjct: 381 QIGNAIPPLFGEQVGIILKKMI 402
>gi|427723401|ref|YP_007070678.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355121|gb|AFY37844.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 401
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 61/293 (20%)
Query: 112 MPLDTPLK--CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
MP PLK LD+F G GG+ G +AG K ++ ++ NF +C + +
Sbjct: 1 MPSQQPLKPAVLDVFCGAGGMSLGFQRAG-CKILGGIDHNPHAVTTHHQNFPKCKLKLEA 59
Query: 170 CNL-VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR-------ELEKSKL 221
++ L+ L + Q + EVD+++ GPPCQ FS++ + ++EK
Sbjct: 60 TDIRTLEDLPSLNLQPR--------EVDILIGGPPCQVFSRVGLGKMKHDLKWDIEKDH- 110
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGN 281
+N L ++ F D +QP + ++ENV L NK E+L I L Y+V ++VL S
Sbjct: 111 RNFLYKEYVRFVDYYQPFFFVMENVDNLA--NKKELLSTILDELAACGYKVEYEVLDSSK 168
Query: 282 YGVAQSRNRVVILASKPGYKL-PSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRD 340
+GV Q R R+ ++ + P FP+P S Q ++ +V D
Sbjct: 169 FGVPQRRRRIFLIGVRSDLLWEPIFPKP----SGQ------------------KAFSVGD 206
Query: 341 AISDLP-------------RVSQGANC-YLFHNPPKTHFQRMMK--DGSRIHD 377
AISDLP R + +C L+ P++ +Q+ M+ +G R+ +
Sbjct: 207 AISDLPELKPIILSLKSKSRGPRQKDCDLLYRGEPESIYQQKMRRHNGDRVRN 259
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WD+ T+ T + +HP Q R ++VRE AR Q FPD++VF+ + M++
Sbjct: 303 RLYWDKPSWTL--TAHMRKDCLAYIHPLQTRSISVREAARIQSFPDNFVFQAPMTRMFEL 360
Query: 580 IGNAVPPPLAKAIGYEIIKCI 600
IGN+VPP LA+A+ I+K I
Sbjct: 361 IGNSVPPLLAEAVAKPIVKLI 381
>gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
Length = 393
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ +GL QAG P SVE+ +A++ NF +C C + + +
Sbjct: 63 VDLFCGAGGITQGLSQAGFT-PLASVEISPIASATHKKNFPQCHHF---CGDIEQFSAQD 118
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
Q G EV+++V GPPCQGFS A + + +N L + F+ +P Y
Sbjct: 119 WLQQIGSP-----EVNVVVGGPPCQGFS---VAGKRDPKDPRNRLFYEFVRVVSEIRPWY 170
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV G++ K + I + Y ++ +L+S YGV Q R R + +A++ G
Sbjct: 171 VVMENVPGILTIQKGSVKTAIIEAFKSIGYPHISVAILESAAYGVPQIRPRAIFIANRFG 230
Query: 300 YKLP 303
P
Sbjct: 231 MPNP 234
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 311 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 370
>gi|392862764|gb|EAS36569.2| DNA (cytosine-5-)-methyltransferase [Coccidioides immitis RS]
Length = 1117
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQ 167
P+ L+ L+LF G G GL + + W+VE + +Y AN +E + +
Sbjct: 602 PLEAKRKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFR 661
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLV 226
+ L ++G L Q V+ I AG PCQG+S N +R+ K L+N ++
Sbjct: 662 GSVDDFLAVAIRGQRSDLVAKLGQ---VEFISAGSPCQGYSLAN-SRKGNKVSLRNSSMI 717
Query: 227 FTFLSFCDLFQPKYIILENVTGLVH--FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ ++ D ++P+Y ILENV + +N + Q I + + YQ+ L + +YG
Sbjct: 718 ASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQLIC-AFVGLGYQLRLMHLDAWSYGA 776
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHA 311
QSR+R+ +L + PG +LP P H+
Sbjct: 777 PQSRSRLFLLIAAPGLQLPEHPALTHS 803
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
TI T +P K G+ LH +DR+LT+ E RAQG+PDS V G +K +GN+V
Sbjct: 925 TITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGNSVARQ 984
Query: 588 LAKAIGYEI 596
+A A+G I
Sbjct: 985 VALALGLSI 993
>gi|344240108|gb|EGV96211.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 85
Score = 95.1 bits (235), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 537 LNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ KQG++LHPEQ RV++VRE AR+QGF D+Y F G I D ++Q+GNAVPPPLAKAIG EI
Sbjct: 1 MGKQGRVLHPEQHRVVSVRECARSQGFRDTYRFFGSILDRHRQVGNAVPPPLAKAIGLEI 60
Query: 597 IKCI 600
C+
Sbjct: 61 KLCM 64
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN ++ C ++Q DC+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQLDCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRS-ITVRDAISDLPRVSQGA 352
+ + L SF Q H S P ++ +++DA+ DLP + G
Sbjct: 162 VGT-----LKSFKQKFH------------------SPKPIKTHFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDDYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 138/315 (43%), Gaps = 46/315 (14%)
Query: 108 PKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
P +P ++P L LFSGCGG EG+ +G +VEL++ +Y NF + +
Sbjct: 12 PGKTVPRESPPTALSLFSGCGGFCEGIESSGFEVRA-AVELDKYACETYRHNFPRTKLFE 70
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D ++S L T H V + VDL+ GPPCQGFSQ+ R L+ +N L
Sbjct: 71 GD----VQSFLTEGTDH--VESFRVKGVDLVFGGPPCQGFSQIG-MRRLDDE--RNELYQ 121
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDV-LQSGNYGVAQ 286
+ +P+ ++ENV L NK I + Y T + + + +YGV Q
Sbjct: 122 QYTRIVAKLKPRVFLMENVPNLALMNKGHFKHLILKEFADLGYSNTVMLRVSADDYGVPQ 181
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
+R RV+ + ++ +L + S + + G VA R +TV +AISDLP
Sbjct: 182 TRQRVIFVGTRDEEQL-----NVDLGSLCEWVLEGLKVA--------RPVTVAEAISDLP 228
Query: 347 -RVSQGANCYLFHNPPK-THFQRMMK---DGSR-----------------IHDIHINLRE 384
++ + + K T FQ+ M+ DG+ +H+ H +
Sbjct: 229 AKIVDSGDVMPYPKTTKLTPFQKDMRLDHDGTHYTKAGKRKRGLGNEQVVLHNHHTKEMQ 288
Query: 385 LLQDHICKILSPLME 399
+ H+ L P M+
Sbjct: 289 AKRAHLISFLKPGMK 303
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGY---EIIKCI 600
+HP +R +TVRE AR Q F D +VF+G KQ+GNAVPP L A+G+ EI++ +
Sbjct: 344 VHPHLERWITVREAARLQSFHDGFVFKGSEWQQLKQVGNAVPPLLGNALGHLAQEILRAL 403
>gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS
127.97]
Length = 584
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 109 KFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
+ P+P D F G GG+ G QAG+ K W+ + S SY ANF C
Sbjct: 269 RGPVPHKRRYTFGDGFCGAGGVSRGAQQAGL-KLLWAFDKWESAINSYRANFPSCLAEHS 327
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
+ L SLP++ VD++ PPCQ FS + + +F+
Sbjct: 328 EVAQFL------------TSLPREILVDVMHVSPPCQPFSPA-KTIAAAHDEANEACLFS 374
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
+L +P+ +E +GL + L I H L+++ Y V + ++ +YGV QSR
Sbjct: 375 IYRLIELCKPRVATMEQTSGLKQRHP-VWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSR 433
Query: 289 NRVVILASKPGYKLPSFPQPLHA 311
R++++A+ PG +LP FPQP H
Sbjct: 434 CRLILIAAGPGEELPPFPQPTHG 456
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAVPPPLAKAIGYEIIK 598
G HP R T+RE A Q FP ++ F C + +QIGNAVPP LA+AI E++K
Sbjct: 509 GDNFHPSGTRTFTLREAASLQTFPLNHAF----CAPGVMRQIGNAVPPVLARAILDEVVK 564
Query: 599 CIGNAVPPPLAKA 611
+ N P A
Sbjct: 565 SLRNTDCPATGPA 577
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ +++ SY AN +E C ++Q DC+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDNDAILSYQANHKETQTILCDIMQLDCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ A +++DA+ DLP + G
Sbjct: 162 VGTLKSFKQKFHFPKPIKA-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSSSAKRLQIGNAVPPLLSVALAQAVF 343
>gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 348
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 37/261 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LDLF GCGGL G QAG ++ + +Y A + I D + +
Sbjct: 10 VLDLFCGCGGLSLGFIQAGFDVKL-GIDYWQDAITTYTATHKGTQGIVADLFNITPEQIS 68
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
TQ K ++D+I+ GPPCQGFS + R ++ + N L F+ F +QPK
Sbjct: 69 QQTQIK--------QLDVIIGGPPCQGFS-IAGKRMIDDER--NQLYKAFVDFVRFYQPK 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
++ENV ++ K I Q I ++ Y V +L + +YGV Q+R R + K G
Sbjct: 118 AFLMENVPNIMSMGKGAIKQQITQDFEQLGYIVKSQILMASDYGVPQNRKRAFFVGFKNG 177
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP--RVSQGANCYLF 357
+ FP+ T+N + +TV+ AISDLP V GA L
Sbjct: 178 -TIFEFPKQ---------TVN-------------QYVTVKQAISDLPDYSVDDGAAYPLL 214
Query: 358 HNPPKTHFQRMMKDGSRIHDI 378
+ H R G H I
Sbjct: 215 GSSEYQHMMRQNSTGLFNHQI 235
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
H + +RV TVRE AR Q FPD ++F G +Q+GNAVPP LAKAI
Sbjct: 292 FHYQFNRVPTVRESARIQSFPDDFIFLGTKTSQLRQVGNAVPPMLAKAIA 341
>gi|428773784|ref|YP_007165572.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428688063|gb|AFZ47923.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 422
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 17/189 (8%)
Query: 114 LDTPLK----CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
+++PLK +DLF+GCGG+ GL +G VE++ A + NF I D
Sbjct: 10 INSPLKKRPIAIDLFAGCGGMSLGLEASGF-DIVAGVEIDPIHALIHHLNFPYTKTICQD 68
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
+ + ++LK +PQK E+DL+ GPPCQGFS + + R+L+ + N LVF +
Sbjct: 69 ISELNTTILKD-------IIPQK-ELDLVAGGPPCQGFSLMGK-RQLDDPR--NALVFEY 117
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYGVAQSR 288
L QPKY I ENV G++ + LQ + + Y+V V+ + +G Q R
Sbjct: 118 LRVIKDLQPKYFIFENVPGMLTGKHQQFLQELMEEFNSIGYRVAKPRVMNASLFGAPQKR 177
Query: 289 NRVVILASK 297
R+++L S+
Sbjct: 178 KRLILLGSR 186
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H +Q R +TVRE AR FPD ++F I +++IGNAV P LAKA
Sbjct: 312 TAPRPI-------HYQQPRCITVREGARLHTFPDWFLFHETIWHGFREIGNAVIPLLAKA 364
Query: 592 IGYEIIK 598
+G EIIK
Sbjct: 365 LGDEIIK 371
>gi|238892833|ref|YP_002917567.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402782665|ref|YP_006638211.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238545149|dbj|BAH61500.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402543514|gb|AFQ67663.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 350
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 170/489 (34%), Gaps = 165/489 (33%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ C+DLF G GGL GL GV ++++ + Y+ N + I+ + S
Sbjct: 4 VSCVDLFCGAGGLTHGLVLEGVPVVA-GIDIDPACKFPYETN-NKAKFIEKSVSDFTSSD 61
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L L +V ++ PCQ FS R E K GL++ F + +
Sbjct: 62 LN--------ELYADSDVRILAGCAPCQPFSSYARRYEHGGKDGKWGLLYEFSRLAEETR 113
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P I +ENV + ++E+ L ++ Y V F+V+ +Y V Q R R+V+LAS
Sbjct: 114 PDLITMENVPSVA---RHEVFSDFVDTLKRIGYHVWFNVIDCTHYDVPQMRKRMVLLAS- 169
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNL-VANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
++G + +A T P ITVR AISDLP + G
Sbjct: 170 ---------------------LHGEIKLAESTCTQP---ITVRQAISDLPALKAGET--- 202
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI-RLIPSFPNADWRD 415
G ++H + S L E + R+ S P WRD
Sbjct: 203 -------------SSGDKLH----------------VTSTLSEKNLQRIKASKPGGTWRD 233
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
P E L V DC H R
Sbjct: 234 WP--------------EHL---------VADC---------------------HRTDRGK 249
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ V GR+ WD+ +TT
Sbjct: 250 TYSSVYGRMEWDKPA--------------------------------------PTMTTQC 271
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD--------MYKQIGNAVPPP 587
G+ HPEQDR +++RE A Q FP YVF I D + + IGNAVP
Sbjct: 272 YGFGNGRFGHPEQDRAISLREAAILQSFPQDYVF---IPDDSNVNLRVLGRMIGNAVPVK 328
Query: 588 LAKAIGYEI 596
L +AI I
Sbjct: 329 LGQAIARSI 337
>gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205]
gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205]
Length = 353
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ----ECSVIQDD 169
++ KC+D F G GGL GL QAG +S ++E A+ AN + + +D
Sbjct: 1 MNKKYKCIDCFCGAGGLCLGLIQAGF-DILYSFDIEAKAIATIKANPEYFKNHKAETRDI 59
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
++ LLK G E+DL+ GPPCQGFS +L++ +N LV +
Sbjct: 60 YDVETAELLKSLNLKSG-------ELDLLAGGPPCQGFSVQRIGADLDE---RNHLVEEY 109
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+S +PK ILENV G+ IL + K Y + +L + +YGV Q R
Sbjct: 110 ISKVIAIRPKMFILENVPGIEGKRGKNILHSALEKVEKSGYFIHEKILDAQDYGVPQRRK 169
Query: 290 RVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
RVVI+ + +K+P F P H ITVR+AI+ LP
Sbjct: 170 RVVIVGERKDHKIPLFEYP-----------------KPQEH----KITVREAIAYLP 205
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 494 GQKNTIIPWSLV----HTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD 549
GQ +P L+ +S+ + V GR+ WD+ TI + + G HPEQ+
Sbjct: 239 GQGRDFLPPELLADCHKVSSKLIGHRNVYGRMPWDDVAPTITARFDSFTR-GMFGHPEQN 297
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +++RE A Q FP +VF G ++ +QIGNAVP +A A+G +I KC+
Sbjct: 298 RSISLREGAILQTFPADFVFVGNKVEVARQIGNAVPVAMAMAVGLQIKKCL 348
>gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase [Phenylobacterium zucineum
HLK1]
gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
Length = 508
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 153/342 (44%), Gaps = 57/342 (16%)
Query: 116 TPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
P + LDLFSGCGGL G G +VE + + AAS+ ANF +D + +
Sbjct: 31 APPRVLDLFSGCGGLSLGFHAQGF-DIVAAVEFDPAAAASHGANFHP----EDPRHGRPR 85
Query: 176 SLLKGHTQHKGVSL---PQKHEVDLIVAGPPCQGFSQLNRAR--------ELEKSKLKNG 224
+ + + + L P + VD++V GPPCQ F+++ R++ E + +
Sbjct: 86 DITRLTPEQLALELDLGPVEQAVDVLVGGPPCQAFARVGRSKLREIAEHPEAFRLDARAR 145
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
L +L + F P +++ENV +++ + + L ++ Y V + +L + YGV
Sbjct: 146 LYLEYLRYVQAFLPLAVVMENVPDVLNHGGQNVAEETRTFLEELGYDVKYSLLNAAFYGV 205
Query: 285 AQSRNRVVILASKP--GYKLPSFPQPLH--------AFSNQL---FTINGNLVANKTSHA 331
Q R R++++A++ G ++ FP P H A S Q+ G L+ +
Sbjct: 206 PQMRERMILIATRRELGVEI-RFPAPTHHIELPPGYAGSRQVALKLLNQGALLDTAPGYQ 264
Query: 332 PYRS--------ITVRDAISDLPRVS--------QGANCY----LFHNPPKTHFQRMMKD 371
P S +T +A+ DLP ++ +GA + + + P++ + +M+
Sbjct: 265 PALSPDRSLPSAVTAAEALGDLPEITGHLRGEIRRGARRFDALVRYPHEPRSDYATLMRS 324
Query: 372 GSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS--FPNA 411
+ E ++DH+ + L ++ RL P +P A
Sbjct: 325 WPSFENA-----EGVRDHVIRYLPRDWKLFGRLRPGDQYPEA 361
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
Q R ++VRE AR Q FPD +VF+G + ++QIGNAVPP LA+A+ EI A+ P
Sbjct: 440 QSRTISVREAARLQSFPDGFVFKGAMNAAFRQIGNAVPPLLARAVAGEIAAAFQRAMAP 498
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 37/257 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQEC-SVIQDDCNLVLKSLL 178
+DLF GCGGL +G +A ++ + +++ N + ++ D NL + +
Sbjct: 7 VIDLFCGCGGLSQGFIEADY-NVILGIDHWKDAIETFNYNHKNSKGIVADLLNLDPQEIK 65
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ VDLIV GPPCQGFS + R ++ + N L +FL F D F+P
Sbjct: 66 TRYAIE---------NVDLIVGGPPCQGFSIAGK-RIIDDER--NQLYKSFLRFVDYFKP 113
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K ++ENV ++ + I + Y++ ++ L + ++ V Q+R R + K
Sbjct: 114 KGFVMENVPNILSMGNGAVKSQILKDFKDIGYKINYNKLLASDFAVPQNRRRAFFVGLKN 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
+ FP+P+ NK IT +AISDLP+ S C
Sbjct: 174 SLEF-EFPKPI-------------TTDNK--------ITSEEAISDLPKDSLEDGCQYTI 211
Query: 359 NPPKTHFQRMMKDGSRI 375
N PK+ FQR M++G+++
Sbjct: 212 N-PKSVFQREMRNGNKV 227
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 34/53 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
H E +RV TVRE AR Q F D ++F G YKQ+GNAVPP LAK I +I
Sbjct: 290 FHYEFNRVPTVRESARIQSFRDEFIFCGSKTSQYKQVGNAVPPLLAKEIALKI 342
>gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
Length = 360
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GGL G AG + ++E+++S ++Y NF +VI+ D
Sbjct: 7 AIDLFAGAGGLSLGFHMAG-WQITTAIEIDKSAVSTYRENFPSTNVIRSDV--------- 56
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN--RARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + Q +DL+V PPCQ FS N R ++L ++K K+ LV F+ +
Sbjct: 57 -----RAIDFTQFQGIDLVVGSPPCQPFSVPNQERNKQLSRAKPKD-LVPEFIRAVRDIR 110
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV--VILA 295
PK ++E + GL KN Q I L ++Y V +VL++ +YG+ Q R R+ V LA
Sbjct: 111 PKAFLMETMPGLQRSKKNHYYQWIEQQLQTLDYSVYVEVLEAASYGIPQYRERLFFVGLA 170
Query: 296 SKPGYKLPSFPQPLHAFSN 314
+K + +FP+ H
Sbjct: 171 TKNDF---TFPRKTHGLGT 186
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
E R LTVRE AR Q FPD +VF+G Y+Q+GNAVPP LAKA+G I K I
Sbjct: 281 EGVRRLTVRESARLQSFPDHFVFKGSKTSRYRQVGNAVPPRLAKAVGEAIHKAI 334
>gi|434387116|ref|YP_007097727.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
gi|428018106|gb|AFY94200.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
Length = 426
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GG+ G QAG +VE++ A+++ NF + I C V+ L G
Sbjct: 7 IDLFAGAGGMSLGFEQAGF-DVVAAVEIDPIHCATHEYNFPLSATI---CASVID--LTG 60
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
L K ++D++ G PCQGFS + + R E + N LVF ++ PKY
Sbjct: 61 DEIRSRAKLDDK-DIDVVFGGAPCQGFSLMGK-RVFEDPR--NQLVFHYVRLVRELNPKY 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L + L Y V + VL + +YGV Q R R+ ++ ++
Sbjct: 117 CVFENVKGLTLGKHAQFLDELITALGDAGYTVLTPYKVLNAADYGVPQDRRRLFLIGARK 176
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ-----GAN 353
KLP +P+P NQ +TV +AI DLP + G +
Sbjct: 177 DMKLPEYPKP-----NQ------------------DRVTVLEAIGDLPDADRFDDLWGTD 213
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHD 377
+ K+ + R ++ R D
Sbjct: 214 TISYQWETKSTYARKLRGFERDPD 237
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR +PD + +QIGN+VPP LA+A
Sbjct: 304 TSPRPI-------HPWFPRVITVREAARLHSYPDWFRLHSTKWHGCRQIGNSVPPLLARA 356
Query: 592 IGYEIIKC 599
+ E+IK
Sbjct: 357 VASELIKA 364
>gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106]
Length = 397
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 40/243 (16%)
Query: 114 LDTPL------KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ 167
+DTPL +DLF G GG+ +GL QAG + SVE +A++ NF C
Sbjct: 50 VDTPLIAASQYNFVDLFCGAGGITQGLIQAGF-QALASVETSSIASATHQRNFPHCHHFC 108
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D + K + P EV+L+V GPPCQGFS A + + +N L +
Sbjct: 109 GDIEQFSPKIWL-----KQIGSP---EVNLVVGGPPCQGFSV---AGKRDPKDPRNRLFY 157
Query: 228 TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY-QVTFDVLQSGNYGVAQ 286
F+ +P Y+++ENV G++ + Q I + Y ++ +L+S +YG+ Q
Sbjct: 158 EFVRVVSEIRPWYVVMENVPGILTIQNGNVKQAIIEAFESIGYPNISVAILESADYGIPQ 217
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R R + +A++ G P +P K +P + + AISDLP
Sbjct: 218 IRPRAIFIANRFGMPNP-YP--------------------KAQLSPEKYKPIESAISDLP 256
Query: 347 RVS 349
+
Sbjct: 257 EYT 259
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP +RV++ RE AR Q FPDS++F G + QIGNAVPP LA+ IGY +I
Sbjct: 311 NHGGTHIHPYLNRVISAREMARLQTFPDSFIFEGTMKKAMWQIGNAVPPRLAECIGYALI 370
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q DC+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLDCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q DC+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLDCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLQLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L+VRE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSVREGARLQSFPDNYKFCGSSSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LFSGCGG EG+ +GV K +VEL++ +Y NF + + D + L
Sbjct: 20 AVSLFSGCGGFCEGIENSGV-KVKVAVELDKFACQTYRHNFPSTPLFEGDVHNFLADG-S 77
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
GH + +VDL+ GPPCQG+SQ+ R+L+ +N L + + +P+
Sbjct: 78 GHEDEYRL-----QDVDLVFGGPPCQGYSQIG-TRKLDDE--RNELYKQYARIVETLRPR 129
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGN-YGVAQSRNRVVILASKP 298
++ENV L NK + I ++ Y+ T +L S + + V Q+R RV+ + ++
Sbjct: 130 VFLMENVPNLALMNKGHFKKIILKHFAELGYKNTIMLLLSADEFSVPQTRQRVIFIGTRD 189
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPR--VSQGANCYL 356
K FP L F + + R++TV +AI DLP V G
Sbjct: 190 EDK---FPYDLQTFCETVL----------DCYRVERAVTVGEAIGDLPADIVHSGETMDY 236
Query: 357 FHNPPKTHFQRMM--------------------KDGSRIHDIHINLRELLQDHICKILSP 396
+ F + M K +R+H+ H + + H+ +L P
Sbjct: 237 PKTRNPSQFMKDMRLDFDGPRYPKSLKRKRGIGKGAARLHNHHTKEIQARRAHLISLLEP 296
Query: 397 LMEMRIRLIPSFPNADW 413
M+ S P W
Sbjct: 297 GMKAN-----SLPKEIW 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+HP +R +TVRE AR Q F D +VF G KQIGNAVPP L A+G
Sbjct: 340 IHPYLNRWITVREAARLQSFHDGFVFVGSEWQQLKQIGNAVPPLLGYALG 389
>gi|421556177|ref|ZP_16002094.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402338030|gb|EJU73269.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
Length = 330
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI---- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K P+ +D I+ GPPCQ +S+ R ++ ++ + L F ++ Q
Sbjct: 56 -------KEEDFPEG--IDGIIGGPPCQSWSEAGALRGIDDTRGQ--LFFDYIRILKSKQ 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ NE +Q + + Y VT ++ + +YGVAQ R RV + +
Sbjct: 105 PKFFLAENVSGMLANRHNEAVQNLLKMFDECGYDVTLTMVNAKDYGVAQERKRVFYIGFR 164
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
++ SFP+ G+ V +K IT+RD I DL
Sbjct: 165 KDLEIQFSFPK-------------GSTVEDKD------KITLRDVIWDL 194
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 277 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 328
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 38/263 (14%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQEC-SVIQDDCNLVLKSL 177
K LDLF G G GL ++ ++ S++ N + V DD
Sbjct: 4 KILDLFCGAVGFSAGLESIEEFDALIGLDCDKQALISWENNHKNAIGVCGDDT------- 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ K + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +
Sbjct: 57 -QTEIIEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRAIK 113
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ I+ENV L+ K L+ I + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERFKALGYQLSYQILNAKDYGVPQNRERAFIVGAS 173
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCY 355
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 174 R------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFES 209
Query: 356 LFHNPPKTHFQRMM-KDGSRIHD 377
+ NP ++ +Q +M KD ++++
Sbjct: 210 DYLNPIQSSYQALMRKDSPKLYN 232
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKNRPTIDTRFDTPS----NGTDSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
+ KQIGNAVPP L A+G I+K +G
Sbjct: 324 ANKTSVCKQIGNAVPPLLGLALGKAILKSLG 354
>gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae]
Length = 341
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 11 PMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI--- 66
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
K P+ E+D I+ GPPCQ +S+ R ++ ++ + L F ++
Sbjct: 67 --------KEEDFPE--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSK 114
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QPK+ + ENV+G++ N +Q + Y VT + + +YGVAQ R RV +
Sbjct: 115 QPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGF 174
Query: 297 KPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ ++ SFP+ G+ V +K IT++D I DL
Sbjct: 175 RKDLEIKFSFPK-------------GSTVEDKD------KITLKDVIWDL 205
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 552 LTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 290 MTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
>gi|336243018|ref|XP_003343078.1| hypothetical protein SMAC_10456 [Sordaria macrospora k-hell]
Length = 249
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+++++ENVTG+ I++ I+ + ++ YQV VL++ +YGV Q R RVV +A++
Sbjct: 2 PRWLVMENVTGITSIAGGAIVRQIYEEMNRLGYQVEMRVLRAEDYGVPQERRRVVFIANR 61
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL- 356
G + FP+P H Q F +TV DAISDLP++ G + L
Sbjct: 62 VGAPI-LFPEPTHGKGLQPF------------------VTVWDAISDLPKLENGEDRGLP 102
Query: 357 -FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRD 415
F PKT +Q M++ R L +H L+ + R+R IP P WRD
Sbjct: 103 SFGGRPKTAYQAMLRGDCR----------LAYNHSATRLASINLERMRHIP--PGGSWRD 150
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSC 453
+P+ + ++ K + +K+ C + C
Sbjct: 151 IPHDLLPAGMKLAKRSDHTKRYGRPRKTDLACTILTKC 188
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
G +HP Q+R TVRE AR Q FPD + F+G + + Q+GNAVPP L K I ++
Sbjct: 193 GAYIHPVQNRSFTVREAARLQSFPDFFDFKGSRTEQFVQVGNAVPPLLGKRIAEALL 249
>gi|421711470|ref|ZP_16150813.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212619|gb|EKE82481.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 351
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPHFELIWANDIDKDAILSYQANHKEAQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP + +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLP-RVPIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|389684676|ref|ZP_10176003.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas chlororaphis O6]
gi|388551413|gb|EIM14679.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas chlororaphis O6]
Length = 554
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 44/270 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD--------D 169
++ +D+F+GCGG+ G AG P S+E++ A S+ ANF SV D D
Sbjct: 57 IRYMDMFAGCGGISLGFLTAGFT-PVASIEMDPWAAKSHGANFGSRSVGGDKEAHHAPRD 115
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN------ 223
+ G +G + ++D++V GPPCQ F+++ RA+ E+++L+
Sbjct: 116 AVTETADTVFGDLGLQGAT---DRQIDVLVGGPPCQAFARVGRAKLREQARLREEVTADQ 172
Query: 224 --------GLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
L +++F +P +++ENV +++ + + + L + Y V +
Sbjct: 173 AFLVDGRVSLWERYVAFIRATKPVALLMENVPDILNHGGTNVAELVSKSLAEEGYDVAYT 232
Query: 276 VLQSGNYGVAQSRNRVVILA--SKPGYKLPSFPQPLH------AFSNQLFTINGNLVANK 327
+L S YGV Q R R++++ G K P FP P H +++ + A
Sbjct: 233 LLNSVWYGVPQMRERMILVGFHRSTGIK-PRFPVPTHHLILPSGYTSSKSAARRVIKAEG 291
Query: 328 TSH-------APYR--SITVRDAISDLPRV 348
++H AP + + DA++DLP +
Sbjct: 292 SAHHRWIPDPAPESPAATSASDALADLPHL 321
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
+Q R +TVRE AR Q FPD +VF+G + +KQIGNAVPP A AI + +C+G
Sbjct: 474 KQARTITVREAARLQSFPDGFVFKGSMNPAFKQIGNAVPPLFAYAIARGMRECLG 528
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLV 226
+C ++ + + K + LP + V +I GPPCQG S NR R ++ + +N +
Sbjct: 856 NCQDAIREFVTSGFKSKILPLPGR--VGVICGGPPCQGISGYNRHRNVDSPLNDERNQQI 913
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQ 286
F+ + +P Y+++ENV ++ +K + + L+ M YQ ++ +G YG++Q
Sbjct: 914 IVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQ 973
Query: 287 SRNRVVILASKPGYKLPSFPQPLHAFSNQL-----FTINGNLVANKTSHAPYRSITVRDA 341
R+RV + + P LP FP P H + F N A +++ ++DA
Sbjct: 974 FRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDA 1033
Query: 342 ISDLPRV 348
ISDLP V
Sbjct: 1034 ISDLPHV 1040
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 516 GVLGRLAWDESFDTIVTTPN-----PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
G RL WDE+ T++T P P +LHPEQDRVLT+RE AR QGFPD + F
Sbjct: 1052 GPFARLWWDETVPTVLTVPTCHSQVPSKPFQALLHPEQDRVLTIRESARLQGFPDYFQFC 1111
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEI 596
G I + Y QIGNAV +++A+GY +
Sbjct: 1112 GTIKERYCQIGNAVAVSVSRALGYSL 1137
>gi|448626675|ref|ZP_21671454.1| DNA-cytosine methyltransferase [Haloarcula vallismortis ATCC 29715]
gi|445760287|gb|EMA11551.1| DNA-cytosine methyltransferase [Haloarcula vallismortis ATCC 29715]
Length = 452
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF G GGL +GL AG + W ++ E + +YDAN + C + + +
Sbjct: 6 LTAIDLFCGAGGLSQGLHDAGF-EVLWGIDHEENTKPTYDANHE--------CEMTVGDI 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR--ELE----KSKLKNGLVFTFLS 231
+ G+ ++ E+DL+ GPPC FS + R++ LE +S ++ L FL
Sbjct: 57 REEEPPDLGL---EEGELDLVAGGPPCPTFSLVGRSKINSLEGRDNQSDERHLLYEEFLR 113
Query: 232 FCDLFQPKYIILENVTGLVHFNKNE---ILQCIFHCL----------LKMNYQVTFDVLQ 278
F D +QPK ++ENV G++ + ++ I + L ++Y V +L
Sbjct: 114 FVDHYQPKAFLMENVEGMLSAENEDGKPVVDTIKEQMRGEREVADMDLDLDYNVKVQLLD 173
Query: 279 SGNYGVAQSRNRVVILASKPGYKLPSFPQ 307
S NYGV Q R+R+ + ++ G + P Q
Sbjct: 174 SANYGVPQHRSRLFFIGNRLGAENPDMEQ 202
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 537 LNKQGKI-LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYE 595
L K G + +HP + R +TVRE AR Q F D++ F +KQ+GNAVPP LA+A+G
Sbjct: 374 LYKDGHMFIHPNEARSITVREAARLQSFKDTFEFPVSRTHAFKQVGNAVPPLLAQALGTA 433
Query: 596 IIKCIGN 602
I I N
Sbjct: 434 IRTEIFN 440
>gi|417993543|ref|ZP_12633890.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
gi|410531479|gb|EKQ06205.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
Length = 311
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ +DLF+GCGGL EGL QAG+ ++VEL+ + Y+ N + +I D +
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGITVK-YAVELDPRISKIYEGNHHKTIMINSDIRRISDDD 61
Query: 178 LK--GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR-ARELEKSKLKNGLVFTFLSFCD 234
+ GH VD++ PPCQGF+Q+NR + S +N L+ +L
Sbjct: 62 FRRMGH-------------VDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVK 108
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ +P +I++ENV ++++++ + L ++ Y + F + ++G+ QSR R+V++
Sbjct: 109 IIKPNFIMMENVPQIIYYDR---FNSMLEELKEIGYSIDFKEINVKDFGIPQSRRRLVLI 165
Query: 295 AS 296
+
Sbjct: 166 GA 167
>gi|355647183|ref|ZP_09054875.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
gi|354828056|gb|EHF12186.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
Length = 356
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 15/234 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF G GGL GL +AG K EL+ + A +Y +N ++ + D + + + +
Sbjct: 8 AIDLFCGAGGLTTGLKKAGF-KVLAGFELDNTAAETYKSNHRKTRIFISDISRLNPTEVM 66
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQ---LNRARELEKSKLKNGLVFTFLSFCDLF 236
+ +K E+DL+ PPCQGFS N++ +E + N L+F+ L F
Sbjct: 67 AELKL------EKGELDLLAGCPPCQGFSTHKTRNKSSSVEDER--NNLIFSILEFIKTL 118
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK I++ENV GL + E + L + T VL + ++GV Q R R+++ AS
Sbjct: 119 EPKTIMIENVPGLAKDPRIEEFKSEIGLLGYKIDKNTIQVLDAADFGVPQRRKRMILQAS 178
Query: 297 KPGYKLPSFPQPLHAFSNQLFT--INGNLVANKTSHAPY-RSITVRDAISDLPR 347
+ GY P P Q ++ L + P+ RS V + I ++P+
Sbjct: 179 RFGYISPPTPVKKRKTVKQAIGKLLSPGLSGDALHDLPFTRSKKVNEIIKNVPK 232
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 510 RNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDS 566
R +++ V GR+AW++ TI T P+ +G+ +HPEQDR +T+RE A Q FP +
Sbjct: 252 RPGSYRDVYGRMAWNDVSPTITGGCTNPS----KGRFIHPEQDRAITLREAALLQTFPQN 307
Query: 567 YVF--RGGICDMYKQIGNAVPPPL 588
Y F + G IGNA+PP L
Sbjct: 308 YKFSLKKGKDFTALMIGNALPPHL 331
>gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus
stearothermophilus]
Length = 1068
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 43/232 (18%)
Query: 88 NARPLELAYIL-KIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSV 146
NA P L+Y L K I +K F+ DLF+G GGL G AG+ + ++
Sbjct: 775 NAVPPLLSYALGKTIKAKTFV--------------DLFAGAGGLSYGFELAGL-EGMAAL 819
Query: 147 ELERSEAASYDANFQ----------ECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVD 196
E+++ A +Y N IQ+ +K+ LKG T +D
Sbjct: 820 EIDKDAAETYAKNHSSNIDVIVGDIRSPEIQNQLIESVKNKLKGRT------------LD 867
Query: 197 LIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNE 256
LI G PCQGFS + ++ +N LV FL P Y+++ENV GL++ NK
Sbjct: 868 LIAGGLPCQGFSTAGWRKPDDE---RNALVTYFLQVVQKLMPNYVLIENVEGLINMNKGL 924
Query: 257 ILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
+L+ I L ++ Y + VL + YGV Q R RV I+A+K G +LP P
Sbjct: 925 VLKSIHEVLDELGYIYYKNPWVLSAEQYGVPQMRKRVFIVAAKKGLELPKPP 976
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 519 GRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL ++ TI T N P N G +HP ++R ++ RE AR Q FPDS++F G +
Sbjct: 713 GRLNPNQPAYTISTYFNRPGN--GTNIHPWENRTISCREAARLQSFPDSFIFYGKEGAVR 770
Query: 578 KQIGNAVPPPLAKAIGYEI 596
KQIGNAVPP L+ A+G I
Sbjct: 771 KQIGNAVPPLLSYALGKTI 789
>gi|385858452|ref|YP_005904963.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
Length = 416
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ------ECSVIQDDCNL 172
K +DLFSG GGL L AG +P SVE+ +Y NFQ E +D ++
Sbjct: 93 KFIDLFSGAGGLSCDLVMAGF-EPIASVEIMPDAVETYVYNFQNRKKKEELIETRDIRDV 151
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLS 231
+K L + + K ++DLIV G PCQGFS NR + +N L L
Sbjct: 152 KVKEEL--YNKFKDT------DIDLIVGGFPCQGFSMAGNRVVD----DPRNSLYLEMLE 199
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK++++ENV GL ++ Q I + + YQ+ L S +Y VAQ+R RV
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKRV 259
Query: 292 VILASKPGYKLPSFPQPL 309
+ +A+K K+ FP+P+
Sbjct: 260 IFIANKIN-KINYFPKPI 276
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP+ RVLT RE A Q FPD ++F+G QIGNAVPP LAKAIG+ I
Sbjct: 348 NHGGVNIHPKLPRVLTPRELAALQSFPDDFIFKGSKKWQLVQIGNAVPPLLAKAIGFAIK 407
Query: 598 KCI 600
K +
Sbjct: 408 KSL 410
>gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae]
Length = 341
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 11 PMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI--- 66
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
K P+ E+D I+ GPPCQ +S+ R ++ ++ + L F ++
Sbjct: 67 --------KEEDFPE--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSK 114
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QPK+ + ENV+G++ N +Q + Y VT + + +YGVAQ R RV +
Sbjct: 115 QPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGF 174
Query: 297 KPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ ++ SFP+ G+ V +K IT++D I DL
Sbjct: 175 RKDLEIKFSFPK-------------GSTVEDKD------KITLKDVIWDL 205
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 288 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
>gi|429197447|ref|ZP_19189341.1| DNA (cytosine-5-)-methyltransferase [Streptomyces ipomoeae 91-03]
gi|428666814|gb|EKX65943.1| DNA (cytosine-5-)-methyltransferase [Streptomyces ipomoeae 91-03]
Length = 413
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWS-------VELERSEAASYDANFQECSV 165
P D+ +K +DLFSG GG G A P S VE + + AA+Y NF V
Sbjct: 14 PDDSSIKVVDLFSGAGGFSAGFRAYEPAGPGSSPFESVAAVEYDEAAAATYAVNFGASHV 73
Query: 166 IQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL---K 222
D P + +VD+I+ GPPCQGFS L+R EK K+ +
Sbjct: 74 ANVDIATWDPE-------------PYRDKVDVIMGGPPCQGFSALHR-NNPEKPKVDDPR 119
Query: 223 NGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKM-NYQVTFDVLQSGN 281
N L ++ PK +LENV + + E LQ + NY + + +L + +
Sbjct: 120 NRLWVEYVRVVRAINPKIFVLENVDRFLKSQEFESLQAATSDGGPLANYTLRWKILNAAD 179
Query: 282 YGVAQSRNRVVILASKPGYKLP-SFPQPLHA 311
YGV Q+R R +++A++ P P+P HA
Sbjct: 180 YGVPQARRRAIVIATRNDLGEPMEHPRPTHA 210
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 509 SRNNNWQGVLGRLAWDESFDTIVTT---PNPLNKQGKILHPEQDRVLTVREYARAQGFPD 565
S N+ V+GR+ + TI T P ++G+ LHP++DR +T E A QGFP
Sbjct: 321 SHNSGSGDVMGRMHANRPSVTIRTEFYKP----EKGRYLHPKEDRPITHYEAALIQGFPL 376
Query: 566 SYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ + G ++ +QIGNAVP L +A+ I
Sbjct: 377 DFKWFGTKVEIARQIGNAVPIGLGRALAQAI 407
>gi|310815203|ref|YP_003963167.1| modification methylase XorII [Ketogulonicigenium vulgare Y25]
gi|308753938|gb|ADO41867.1| modification methylase XorII [Ketogulonicigenium vulgare Y25]
Length = 437
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ G QAG +VE++ AA + NF +C+VI V ++
Sbjct: 7 IDLFSGAGGMSLGFEQAGF-DVVAAVEIDPVHAAVHKFNFPDCAVIPRSVTDVSGEDIRA 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
G+ VD++ G PCQGFS + + R L+ + N LV F+ +P Y
Sbjct: 66 EA---GIG---DQTVDVVFGGAPCQGFSLIGQ-RALDDPR--NALVKDFVRLVRELEPNY 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L + ++ Y V D VL + +YGV Q R R++++ +K
Sbjct: 117 FVFENVKGLTVGKHRKFLFELIEEFEEIGYPVQRDWRVLNAADYGVPQDRQRLILMGAKK 176
Query: 299 GYKLPSFPQPL 309
G LP +P+ +
Sbjct: 177 GRSLPDYPKAI 187
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A +S T+P P+ H DR +TVRE AR GFPD + F +QIG
Sbjct: 295 AGTDSARGAFTSPRPI-------HYAFDRCVTVREMARLHGFPDWFRFNVTKWHGARQIG 347
Query: 582 NAVPPPLAKAIGYEIIKCIG 601
N+VPPPLA+A+ +I +G
Sbjct: 348 NSVPPPLARAVASVVIAALG 367
>gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090]
gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae]
gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae]
gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae]
gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA 1090]
gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|227054|prf||1613419B NgoPII methylase
Length = 341
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
P+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 11 PMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI--- 66
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
K P+ E+D I+ GPPCQ +S+ R ++ ++ + L F ++
Sbjct: 67 --------KEEDFPE--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSK 114
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
QPK+ + ENV+G++ N +Q + Y VT + + +YGVAQ R RV +
Sbjct: 115 QPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGF 174
Query: 297 KPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ ++ SFP+ G+ V +K IT++D I DL
Sbjct: 175 RKDLEIKFSFPK-------------GSTVEDKD------KITLKDVIWDL 205
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 288 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
>gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|383323154|ref|YP_005384007.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326323|ref|YP_005387176.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492207|ref|YP_005409883.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437475|ref|YP_005652199.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|451815566|ref|YP_007452018.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|339274507|dbj|BAK50994.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|359272473|dbj|BAL29992.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275643|dbj|BAL33161.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278813|dbj|BAL36330.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961204|dbj|BAM54444.1| cytosine-specific methyltransferase [Bacillus subtilis BEST7613]
gi|451781535|gb|AGF52504.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
Length = 424
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+GCGG+ GL AG +VE + + NF I D LV +
Sbjct: 7 IDLFAGCGGMSLGLEAAGF-DIAAAVEFDAVHCLVHHHNFPYGVTICRDIALVSAGEILR 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+KG S ++DLI GPPCQGFS + + R+L+ +N LVF ++ +PKY
Sbjct: 66 KLNNKGYS----SDIDLIAGGPPCQGFSLMGK-RQLDDP--RNSLVFEYVRMIRDLKPKY 118
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV G+ + L+ + + Y + VL + YG Q R R++IL S+
Sbjct: 119 FLFENVPGMRSGQHKKFLEELVREFETIGYHIEKPILVLDASLYGAPQKRKRLIILGSRK 178
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYR-SITVRDAISDL 345
K ++P PL+ +L N S+ Y+ T +AI DL
Sbjct: 179 DVKPVTYPLPLYFDVAEL--KQSNCSEKSVSNIAYKPPFTCGEAIDDL 224
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR +PD + F I +++IGN+V P LAK
Sbjct: 326 TAPRPI-------HYALPRCITVREAARLHTYPDWFQFHNTIWHGFREIGNSVVPLLAKV 378
Query: 592 IGYEIIKCIGNAV 604
+G +++ + +V
Sbjct: 379 LGEQVMAALNCSV 391
>gi|423678621|ref|ZP_17653497.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
gi|366041810|gb|EHN18291.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
Length = 436
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 41/242 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI----QDDCNLVLK 175
L FSG GGL G +AG++ AA Y N +EC + + D L+
Sbjct: 59 ALSFFSGAGGLDLGFERAGIS------------AALYCENNRECRMTLHRNRPDVALLGD 106
Query: 176 -SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF-TFLSFC 233
+ + + +PQ E+D++ GPPCQ FS R E + G VF +L
Sbjct: 107 ITKISADEVRRMARIPQGREIDVMFGGPPCQAFSTAGARRAFEDPR---GNVFLRYLDLA 163
Query: 234 DLFQPKYIILENVTGLVHFN----------KNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
+P+Y+++ENV GL+ + +++ I + L +M Y V+F++ + N+G
Sbjct: 164 SELKPRYLVIENVRGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFG 223
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAIS 343
AQ R RVVI+A + G K + P H + + N NL + +T RD +
Sbjct: 224 AAQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPS---------WVTFRDVVY 273
Query: 344 DL 345
D+
Sbjct: 274 DI 275
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+AWD T+VT+P + HP++ R L+V EY R QGFPD + G I D
Sbjct: 326 GFYRRIAWDRPSPTLVTSPT--MPATDLCHPKELRPLSVEEYKRVQGFPDDWWIAGSIHD 383
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+QIGNAVP L +AIG I+
Sbjct: 384 QYRQIGNAVPVSLGEAIGRAIL 405
>gi|379754157|ref|YP_005342829.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804373|gb|AFC48508.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 669
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 128/287 (44%), Gaps = 52/287 (18%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
D FSG GGL GL QAG K S + E ++ +F SV D +L +++
Sbjct: 54 AADFFSGAGGLSLGLEQAGY-KVVMSADHEPFANRTHAHHFGGLSV---DWDLSDPAVVA 109
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRA--RELEKSKLKN------GLVFTFLS 231
K L ++ EVDL+ GPPCQ FS+ R+ R +S L++ L +FL
Sbjct: 110 -----KVGDLMREAEVDLVAGGPPCQPFSRAGRSMIRYRVQSGLRDPHDERRDLWRSFLE 164
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
D +PK +++ENV + + IL+ + L +MNY V V+ + YGV Q R R+
Sbjct: 165 IVDRARPKAVLMENVPDMALDREMFILRSMVEELEQMNYSVEERVIDAWRYGVPQFRQRL 224
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+++A + N P++ +TV +AI DLP V G
Sbjct: 225 ILVA-----------------------LQDNTEFRWPEEDPHK-VTVWNAIGDLPEVEGG 260
Query: 352 ------ANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICK 392
+ + ++ P T FQR M+ G + D H DHI +
Sbjct: 261 WRPEGGQHGWADYSGPVTQFQREMRAGVALADSHKVF-----DHITR 302
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN- 602
+HP Q R LTVRE AR Q FPD + F G ++QIGNAVPP L IG I + + N
Sbjct: 364 IHPRQSRTLTVREAARLQTFPDDFRFDGPPSAAFRQIGNAVPPRLGFLIGRAIRESLDNP 423
Query: 603 --AVPP 606
A PP
Sbjct: 424 RDAGPP 429
>gi|420494407|ref|ZP_14992976.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393111208|gb|EJC11732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q DC
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKEAKTILCDIMQLDC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 -------------YNLPCV-PIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSGSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|378835572|ref|YP_005204848.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
gi|367460357|gb|AEX13880.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
Length = 413
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ------ECSVIQDDCNL 172
K +DLFSG GGL L AG +P SVE+ +Y NFQ E +D ++
Sbjct: 93 KFIDLFSGAGGLSCDLVMAGF-EPIASVEIMPDAVETYVYNFQNRKKKEELIETRDIRDV 151
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKNGLVFTFLS 231
+K L + + K ++DLIV G PCQGFS NR + +N L L
Sbjct: 152 KVKEEL--YNKFKDT------DIDLIVGGFPCQGFSMAGNRVVD----DPRNSLYLEMLE 199
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
QPK++++ENV GL ++ Q I + + YQ+ L S +Y VAQ+R RV
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKRV 259
Query: 292 VILASKPGYKLPSFPQPL 309
+ +A+K K+ FP+P+
Sbjct: 260 IFIANKIN-KINYFPKPI 276
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 40/64 (62%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
N G +HP+ RVLT RE A Q FPD ++F+G QIGNAVPP LAKAIG+ I
Sbjct: 348 NHGGVNIHPKLPRVLTPRELAALQSFPDDFIFKGSKKWQLVQIGNAVPPLLAKAIGFAIK 407
Query: 598 KCIG 601
K G
Sbjct: 408 KKFG 411
>gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 1040
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQ 167
P+ L+ L+LF G G GL + + W+VE + +Y AN ++ + +
Sbjct: 525 PLEAKRKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFR 584
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLV 226
+ L ++G L Q V+ I AG PCQG+S N +R+ K L+N ++
Sbjct: 585 GSVDDFLAVAIRGQGSDLVAKLGQ---VEFISAGSPCQGYSLAN-SRKGNKVSLRNSSMI 640
Query: 227 FTFLSFCDLFQPKYIILENVTGLVH--FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ ++ D ++P+Y ILENV + +N + Q I + + YQ+ L + +YG
Sbjct: 641 ASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQLIC-AFVGLGYQLRLMHLDAWSYGA 699
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHA 311
QSR+R+ +L + PG +LP P H+
Sbjct: 700 PQSRSRLFLLIAAPGLQLPEHPALTHS 726
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
TI T +P K G+ LH +DR+LT+ E RAQG+PDS V G +K +GN+V
Sbjct: 848 TITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGNSVARQ 907
Query: 588 LAKAIGYEI 596
+A A+G I
Sbjct: 908 VALALGLSI 916
>gi|427400236|ref|ZP_18891474.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
gi|425720976|gb|EKU83891.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
Length = 328
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF G GGL GL AG K + + + A+Y NF + V Q D V + L+
Sbjct: 6 SVDLFCGAGGLSLGLELAGW-KTKVAADFDAQACATYKRNFPDTDVHQGDVRSVDWTRLR 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G ++DL+ GPPCQ FS + + + ++ F+ +PK
Sbjct: 65 G-------------KIDLVAGGPPCQPFSVAGNQKAADDIR---DMLPEFVRAVAEIRPK 108
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+++ENV GL L + ++ Y+V F VL S +GV Q RNRV+++
Sbjct: 109 LVLMENVAGLASSRHETYLNEKLAIISELGYEVEFKVLNSAQFGVPQERNRVIVIGVD-- 166
Query: 300 YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSIT 337
+P FP P H + + + N + P +I
Sbjct: 167 RSIPKFPSPTHGTKQRPYKSAREAILNAPADVPNSAIV 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
E R LTV+E A Q FP + F G Y+QIGNAVPP LA A+G +++ +
Sbjct: 275 EGVRRLTVKESAALQSFPSDFEFLGPRSAQYRQIGNAVPPLLAHAVGKALLRSL 328
>gi|385232746|ref|YP_005794088.1| modification methylase XorII [Ketogulonicigenium vulgare WSH-001]
gi|343461657|gb|AEM40092.1| Modification methylase XorII [Ketogulonicigenium vulgare WSH-001]
Length = 446
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GG+ G QAG +VE++ AA + NF +C+VI V ++
Sbjct: 16 IDLFSGAGGMSLGFEQAGF-DVVAAVEIDPVHAAVHKFNFPDCAVIPRSVTDVSGEDIRA 74
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
G+ VD++ G PCQGFS + + R L+ + N LV F+ +P Y
Sbjct: 75 EA---GIG---DQTVDVVFGGAPCQGFSLIGQ-RALDDPR--NALVKDFVRLVRELEPNY 125
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L + ++ Y V D VL + +YGV Q R R++++ +K
Sbjct: 126 FVFENVKGLTVGKHRKFLFELIEEFEEIGYPVQRDWRVLNAADYGVPQDRQRLILMGAKK 185
Query: 299 GYKLPSFPQPL 309
G LP +P+ +
Sbjct: 186 GRSLPDYPKAI 196
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A +S T+P P+ H DR +TVRE AR GFPD + F +QIG
Sbjct: 304 AGTDSARGAFTSPRPI-------HYAFDRCVTVREMARLHGFPDWFRFNVTKWHGARQIG 356
Query: 582 NAVPPPLAKAIGYEIIKCIG 601
N+VPPPLA+A+ +I +G
Sbjct: 357 NSVPPPLARAVASVVIAALG 376
>gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194654|ref|YP_005580399.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|387819961|ref|YP_006300004.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|452892171|ref|YP_005578846.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|386652662|gb|AFJ15792.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|447219165|gb|AEN75813.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
Length = 453
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 41/247 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI----QDDCNLVLK 175
L FSG GGL G +AG++ AA Y N +EC + + D L+
Sbjct: 76 ALSFFSGAGGLDLGFERAGIS------------AALYCENNRECRMTLHRNRPDVALLGD 123
Query: 176 -SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF-TFLSFC 233
+ + + +PQ E+D++ GPPCQ FS R E + G VF +L
Sbjct: 124 ITKISADEVRRMARIPQGREIDVMFGGPPCQAFSTAGARRAFEDPR---GNVFLRYLDLA 180
Query: 234 DLFQPKYIILENVTGLVHFN----------KNEILQCIFHCLLKMNYQVTFDVLQSGNYG 283
+P+Y+++ENV GL+ + +++ I + L +M Y V+F++ + N+G
Sbjct: 181 SELKPRYLVIENVRGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFG 240
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAIS 343
AQ R RVVI+A + G K + P H + + N NL + +T RD +
Sbjct: 241 AAQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPS---------WVTFRDVVY 290
Query: 344 DLPRVSQ 350
D+ Q
Sbjct: 291 DIEDSRQ 297
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+AWD T+VT+P + HP++ R L+V EY R QGFPD + G I D
Sbjct: 343 GFYRRIAWDRPSPTLVTSPT--MPATDLCHPKELRPLSVEEYKRVQGFPDDWWIAGSIHD 400
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+QIGNAVP L +AIG I+
Sbjct: 401 QYRQIGNAVPVSLGEAIGRAIL 422
>gi|420490495|ref|ZP_14989081.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420524322|ref|ZP_15022732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109838|gb|EJC10369.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133481|gb|EJC33898.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP + +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLP-RVPIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|448429916|ref|ZP_21584687.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445689621|gb|ELZ41849.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 30/253 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+G GGL GL +AG + +VE++ S+ AN +E ++ + +
Sbjct: 6 LTYVDLFAGAGGLSVGLERAGF-ELVHAVEVDDDARTSF-ANNREGLEPEEMTQDIREVD 63
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T+ G + VDL+ GPPCQGFS++ + S +N L F+S+ +
Sbjct: 64 NQDITEVVG-----RDTVDLVAGGPPCQGFSEVVSP---DGSDDRNHLFVNFISWVNELD 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK + ENV G+ + + + +M Y VT V+++ ++GV Q R+R+++LA+K
Sbjct: 116 PKAALFENVRGMTNTADGKFFDAVEESFDQMGYDVTHRVVEASDFGVPQHRHRLLVLATK 175
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
P F I G V D I DLP V G +
Sbjct: 176 KS----ETELPFDGFELDPVDIPG----------------VIDGIGDLPEVGPGETKTEY 215
Query: 358 HNPPKTHFQRMMK 370
P+T QR ++
Sbjct: 216 DAEPETVIQRDLR 228
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G T IP L ++ +N++ RL +E +T+ + +HP QDR LT
Sbjct: 256 GGNRTEIPDELQPSSGYHNSYS----RLDSEEPA-VAITSNMSKPSSARCVHPFQDRGLT 310
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR Q FPDSY F G + + KQIGNAVPP LA+A+GY + + +
Sbjct: 311 PREGARLQTFPDSYRFEGRLGAVRKQIGNAVPPYLAEAVGYYLKQSV 357
>gi|334119885|ref|ZP_08493969.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333457526|gb|EGK86149.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 394
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ LDLF G GGL G +AG+ + ++ + +++ N + D S +
Sbjct: 11 RSLDLFCGMGGLTLGFKRAGI-QAIGGIDYCENAKQTFERNLSPLPCLVSDLTQTTVSEI 69
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + E+D+I G PCQGFS + + RE+ + +N L F +P
Sbjct: 70 EEFFKISAA------EIDIITGGAPCQGFSTVGK-REI--TDPRNSLWRNFRDLVAEIRP 120
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
Y+I+ENV G++ ++ + + Y + +L++ +YGV Q R R +
Sbjct: 121 AYVIIENVEGMLVMQGGKVRDSVIASFADIGYHMKCRLLKAADYGVPQLRKRAFFIGWLD 180
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G P FP P+ + +TV DAISDLP ++ G C +
Sbjct: 181 GLLPPEFPVPISHY----------------------YVTVADAISDLPPLNAGEICKSYQ 218
Query: 359 NPPKTHFQ 366
+ P+T +Q
Sbjct: 219 SMPQTDYQ 226
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKC 599
+ HP Q R LTVRE R Q F D + G Y Q+GNAVPP L A+G E++K
Sbjct: 300 ARATHPSQHRGLTVREGLRLQSFDDDFEVMGSRTSQYLQVGNAVPPLLGLAVGKEVVKA 358
>gi|68655475|emb|CAJ01709.1| chromomethylase 2 [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 518 LGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMY 577
GRL WDE T++T PN ++ Q ++HP QDR+LTVRE AR QGFPDSY FRG + D Y
Sbjct: 81 FGRLWWDEVVGTVLTCPN-IHMQA-LIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 138
Query: 578 KQIGNAVPPPLAKAIGYEI 596
+QIGNAV P+ +A+GY +
Sbjct: 139 RQIGNAVAVPVGRALGYAL 157
>gi|404378161|ref|ZP_10983259.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
Length = 331
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 36/244 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSGCGGL G +AG P + E +++ A+Y AN + +I+ D
Sbjct: 1 MKVISLFSGCGGLDLGFERAGFEIPVAN-EYDKTIWATYKANHPKTQLIEGDIR------ 53
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
H Q ++ P E+D I+ GPPCQ +S+ R ++ ++ + L F ++ Q
Sbjct: 54 ---HIQE--INFPD--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSKQ 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ ++ +Q + + Y V+ ++ + NYGVAQ R RV + +
Sbjct: 105 PKFFLAENVSGMLANRHSQAVQNLLKMFDECGYDVSLTLVNAKNYGVAQERKRVFYIGFR 164
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ FPQ G+ +K +T++D ++DL + + A+
Sbjct: 165 KDLNIKFQFPQ-------------GSTADDK------HKLTLKDVMADLQKTAVPASEKN 205
Query: 357 FHNP 360
+ NP
Sbjct: 206 YANP 209
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 550 RVLTVREYARAQGFPDSY-VFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
R +TVRE AR QGFPD++ + I D YK IGNAVP LA I I
Sbjct: 277 RRMTVREVARLQGFPDNFKLIYQKIDDGYKMIGNAVPVQLAYEIAVAI 324
>gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 354
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K +D FSGCGG EGL QAG+ ++ ++ + +Y+ANF E N+ ++ L
Sbjct: 1 MKVIDFFSGCGGASEGLRQAGL-DIAIGLDFDKKASETYEANFPEAKFY----NVDIREL 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ + QK E L+VA PCQ FS N+A+ + ++ L+ F + Q
Sbjct: 56 DEKELAAAFKDINQKEEPLLLVACAPCQPFSSQNKAK--SEDDIRRTLLDETHRFINELQ 113
Query: 238 PKYIILENVTGLVHFNKNEI--LQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
P YI +ENV GL + +K++ + L NY+ + +S YGV Q R R V+LA
Sbjct: 114 PDYIFIENVPGLQNIDKDKEGPYKRFIQFLNMQNYKFIEFIAKSEEYGVPQRRKRFVLLA 173
Query: 296 SKPG 299
SK G
Sbjct: 174 SKIG 177
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQGFPDSYVFRGGIC 574
V GR++WD+ T+ T + G+ HP+ Q R ++VRE +R Q FP ++F+G +
Sbjct: 261 VYGRMSWDKPAPTLTTRCYSYS-NGRFGHPDTNQHRAISVREASRLQTFPKDFIFKGSVV 319
Query: 575 DMYKQIGNAVPPPLAKAIGYEI 596
+ +QIGNAVP +AK G I
Sbjct: 320 EASRQIGNAVPCEMAKQFGLAI 341
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP + +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLP-RVPIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVF 343
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 357
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 49/308 (15%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
D +DLF GCGGL +G +AG V+ E+S ++ N ++ D
Sbjct: 3 DKKYNVVDLFCGCGGLSKGFEEAGY-NILVGVDFEQSALNTFSYNHNGAVGLRLD----- 56
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
L + + V VD+I+ GPPCQGFS L R ++ + N L +
Sbjct: 57 --LSEPESFDAIVDAVDGRLVDIIIGGPPCQGFS-LTGPRNIDDQR--NKLYLAMIETVR 111
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
F+PK ++ENV G+ + + + I +M Y+V+ ++ + +YGV Q R R+V +
Sbjct: 112 RFKPKAFLIENVPGMANLYGGAVKEEIIRRFTQMGYKVSCKIVCAADYGVPQIRKRLVFI 171
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGA 352
+ FP P N L T DAISDLP + + G
Sbjct: 172 GLRDSKASYEFPVPYRLPDNYL--------------------TCEDAISDLPALVDTLGE 211
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIH--INLRELLQDHICKILSPLMEMRIRLIPSFPN 410
+ P FQ++M+ H IN ++ ++D I L+P
Sbjct: 212 EVGKYEMEPLNDFQKLMRGACTTLYNHTAINHKQFVKDVIA------------LVPD--G 257
Query: 411 ADWRDLPN 418
+++DLP+
Sbjct: 258 GNYKDLPS 265
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
+ H + +R TVRE AR Q FPD +VF G KQ+GNAVP +AKA+ +++
Sbjct: 296 LFHYKYNRCPTVRESARIQTFPDDFVFLGNRGQQNKQVGNAVPVLMAKALATKLL 350
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ PPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITSREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 122/304 (40%), Gaps = 51/304 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGV---AKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
LK LDLF G GGL G AG W + +++ N+ I + N +
Sbjct: 3 LKVLDLFCGAGGLSLGFQNAGFNIYGGIEWDEVASLTHTKNFNTNYHFAGDITEVSNETI 62
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
K L ++D+I+ GPPCQGFS NR + E +N L + +L F +
Sbjct: 63 KKELL--------------QIDVIIGGPPCQGFSSANRYLKDEDDP-RNKLFYEYLRFVN 107
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ +PK I+ENV G++ + + I +Y V VL S NYGV + R R +
Sbjct: 108 IIRPKAFIIENVPGILTRDNGYAKEKILELTESYDYNVEVKVLSSENYGVPEIRKRAFFV 167
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAP-YRSITVRDAISDLPRVSQGAN 353
+ NL N + P + + TV DAI DL + G
Sbjct: 168 GIRKDL---------------------NLKFNFANLKPIFENTTVHDAIKDLEVLESGQL 206
Query: 354 CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+ Q+ D + + +++H + + + RI+ +P +W
Sbjct: 207 YNTLFGVELSPIQKYYFDENSLQ---------IENHNISVHNEKVVERIKHVPQ--GGNW 255
Query: 414 RDLP 417
RD+P
Sbjct: 256 RDVP 259
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 500 IPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYAR 559
+P L T RNN RL + + TI T HP RV +VRE AR
Sbjct: 258 VPEELWDT-KRNNRHSSAYRRLDYSKPSITIDTG------HMNYFHPVFHRVPSVRESAR 310
Query: 560 AQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
Q F DS+VF G YKQ+GNAVPP LA+A+ E+
Sbjct: 311 IQSFNDSFVFYGTKTQQYKQVGNAVPPILAQALAQEV 347
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCIP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + +Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1117
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 111 PMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF---QECSVIQ 167
P+ L+ L+LF G G GL + + W+VE + +Y AN ++ + +
Sbjct: 602 PLEAKRKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFR 661
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKN-GLV 226
+ L ++G L Q V+ I AG PCQG+S N +R+ K L+N ++
Sbjct: 662 GSVDDFLAVAIRGQGSDLVAKLGQ---VEFISAGSPCQGYSLAN-SRKGNKVSLRNSSMI 717
Query: 227 FTFLSFCDLFQPKYIILENVTGLVH--FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+ ++ D ++P+Y ILENV + +N + Q I + + YQ+ L + +YG
Sbjct: 718 ASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQLIC-AFVGLGYQLRLMHLDAWSYGA 776
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHA 311
QSR+R+ +L + PG +LP P H+
Sbjct: 777 PQSRSRLFLLIAAPGLQLPEHPALTHS 803
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 529 TIVTTPNPLNK-QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPP 587
TI T +P K G+ LH +DR+LT+ E RAQG+PDS V G +K +GN+V
Sbjct: 925 TITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGNSVARQ 984
Query: 588 LAKAIGYEI 596
+A A+G I
Sbjct: 985 VALALGLSI 993
>gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli]
Length = 314
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GGL G AG + W+ +++ +Y N + V++D + + +
Sbjct: 1 MKVVSLFSGAGGLDLGFKNAGF-QIVWANDIDSDAVLTYKKNIGDHIVLRDLSQIDMDDI 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ D+++ G PCQGFSQ N R K +N L FL + +
Sbjct: 60 ---------------PDCDVVIGGFPCQGFSQANLLRN--KDDERNQLYLEFLRVVNAKK 102
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ +NV G++ + ++ I + Y+V + +YGV Q R RV+I+ +
Sbjct: 103 PKFFFAQNVRGILSLDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVR 162
Query: 298 PGYKLPS-FPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
K+ +PQP H+ + ++KT AP+ I++ DA+ D+P
Sbjct: 163 DDIKVEYIYPQPTHSSPKK---------SDKTGLAPW--ISIGDALHDIP 201
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
TI+ N I HP+ R ++VRE A Q FP Y F G + Y+Q+GNAVP
Sbjct: 238 TILARGNGKGGVCAIQHPKNHRRMSVRESAIIQTFPLDYEFIGSMTSCYRQVGNAVPVLF 297
Query: 589 AKAIG 593
A+ +
Sbjct: 298 AELLA 302
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + C + ++ +
Sbjct: 4 KILDLFCGAGGYSAGLENLKEFDALIGLDCDKQALITFENNHKNAIGV---CGDITQTDI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K K + L +K E+++I+ PPCQGFS N+ + L +N L ++ +P
Sbjct: 61 K----EKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 520 RLAWD---ESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
RL W+ + DT TP+ G H E R +T R AR Q F D+Y+ G I +
Sbjct: 274 RLNWNNISHTIDTRYDTPS----NGTNSHREMHRSITPRGAARIQSFSDNYMSYGNITSV 329
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
KQIGNAVP LA A+G I++ +
Sbjct: 330 CKQIGNAVPLLLALALGQAILETL 353
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 52/299 (17%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D+F G GGL G Q + W+++ + S ASY +N + I D K G+
Sbjct: 7 DIFCGAGGLSYGFAQNPLFDLVWALDHDSSALASYQSNHKTTKTICKDIAQFSKEECLGY 66
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
+D+++ GPPCQ +S L + R+++ + L +L PK
Sbjct: 67 G-----------SIDVLLGGPPCQSYSTLGK-RQMDT---RAHLFQEYLKILAAVHPKIF 111
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
+ ENV GL+ ++ I C +M YQ+ VL + ++GV Q R RV+++ Y+
Sbjct: 112 LFENVVGLLSMQGGKLFHSICACFAQMGYQIYSRVLNAMHFGVPQIRQRVILVGVDHSYQ 171
Query: 302 LP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG--ANCYLFH 358
P FP+P H I +R A+ DLP++ G + +
Sbjct: 172 KPFVFPKPTHE---------------------KEFINLRLALDDLPQIKSGESGDHLGYR 210
Query: 359 NPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
+P F ++D + + HI+ + + +I+ L + D RDLP
Sbjct: 211 HPANNPFLEFVRDSPTLSE-HISPKN--NPRLVQIMEALQD----------GQDKRDLP 256
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI TP+ + +HP R
Sbjct: 249 GQDKRDLPPALRPKSGYANTY----AKMHWEQPAPTITRNFATPS----SSRCIHPRDSR 300
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
L++RE AR Q FPDSY+F G QIGNAVPP L+ ++ I
Sbjct: 301 ALSIREGARLQSFPDSYIFCGNASAKRLQIGNAVPPLLSISLAQTI 346
>gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis]
Length = 1211
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 30/187 (16%)
Query: 189 LPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENV 246
+P EVD I GPPCQG S NR E +N + F+++ + F+PKY+++ENV
Sbjct: 537 IPFPGEVDFICGGPPCQGISGNNRHAMTEDILQDPRNRQLPVFIAYSEWFKPKYVLMENV 596
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFP 306
++ ++ +L M YQV +L +GN+GV Q R R + A+ PG +LP+ P
Sbjct: 597 QDILKKEDGLYIKYAMGSMLNMRYQVRVGLLAAGNFGVPQGRWRCFLWAAAPGQQLPAIP 656
Query: 307 QPLH---------------------AFSNQLFTINGNLVANK----TSHAPYRSITVRDA 341
+P H A +N + V+N+ H P + + D
Sbjct: 657 KPTHNCIHFKAGSRRDSQAAAPRCCATANNAKRLTSGFVSNEDCTMNGHPP---VLLGDI 713
Query: 342 ISDLPRV 348
SDLP V
Sbjct: 714 FSDLPEV 720
>gi|152973178|ref|YP_001338324.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150958027|gb|ABR80057.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 350
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 170/489 (34%), Gaps = 165/489 (33%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ C+DLF G GGL GL GV ++++ + Y+ N + I+ + S
Sbjct: 4 VSCVDLFCGAGGLTHGLVLEGVPVVA-GIDIDPACKFPYETN-NKAKFIEKSVSDFTSSD 61
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L L +V ++ PCQ FS R E K GL++ F + +
Sbjct: 62 LN--------ELYADSDVRILAGCAPCQPFSSYARRYEHGGKDGKWGLLYEFSRLAEETR 113
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P I +ENV + ++E+ L ++ Y V F+V+ +Y V Q R R+V+LAS
Sbjct: 114 PDLITMENVPSVA---RHEVFSDFVDTLKRIGYHVWFNVVDCTHYDVPQMRKRMVLLAS- 169
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNL-VANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
++G + +A T P ITVR AISDLP + G
Sbjct: 170 ---------------------LHGEIKLAESTCTQP---ITVRQAISDLPALKAGET--- 202
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI-RLIPSFPNADWRD 415
G ++H + S L E + R+ S P WRD
Sbjct: 203 -------------SSGDKLH----------------VTSTLSEKNLQRIKASKPGGTWRD 233
Query: 416 LPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNN 475
P E L V DC H +
Sbjct: 234 WP--------------EHL---------VADC---------------------HRTDKGK 249
Query: 476 NWQGVLGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPN 535
+ V GR+ WD+ +TT
Sbjct: 250 TYSSVYGRMEWDKPA--------------------------------------PTMTTQC 271
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD--------MYKQIGNAVPPP 587
G+ HPEQDR +++RE A Q FP YVF I D + + IGNAVP
Sbjct: 272 YGFGNGRFGHPEQDRAISLREAAILQSFPQDYVF---IPDDSNVNLRVLGRMIGNAVPVK 328
Query: 588 LAKAIGYEI 596
L +AI I
Sbjct: 329 LGQAIARSI 337
>gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
Length = 330
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI---- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K P+ +D I+ GPPCQ +S+ R ++ ++ + L F ++ Q
Sbjct: 56 -------KEEDFPEG--IDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSKQ 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ NE +Q + + Y VT + + +YGVAQ R RV + +
Sbjct: 105 PKFFLAENVSGMLANRHNEAVQNLLKMFDECGYDVTLTMANAKDYGVAQERKRVFYIGFR 164
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
++ SFP+ G+ V +K IT+RD I DL
Sbjct: 165 KDLEIQFSFPK-------------GSTVEDKD------KITLRDVIWDL 194
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA YEI I
Sbjct: 277 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLA----YEIAAAI 324
>gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150]
gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150]
Length = 387
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 56/276 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQA-----GVAKPCWSV----ELERSEAASYDANFQECSVIQD 168
++ +DLFSG GGL G V + +++ E R A ++ N+ + ++I+D
Sbjct: 2 IEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPKITMIED 61
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
D + +S LK KG+S VDL++ GPPCQ FS + + + +++K+
Sbjct: 62 DIANIDESFLK----SKGIS---SKGVDLVIGGPPCQSFSTVGKRQYDKRAKMYR----E 110
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNE----ILQCIFHCLLKMN-------YQVTFDVL 277
+ QPK + ENV GL+ KNE I++ + ++ Y V ++
Sbjct: 111 YRRILSFIQPKMFVFENVYGLLTM-KNEQNGPIIRNVKESFNDLSSFGDVSGYNVYTKLI 169
Query: 278 QSGNYGVAQSRNRVVILASKPGYKLPS---FPQPLHAFSNQLFTINGNLVANKTSHAPYR 334
+ ++GV Q+R RV ++ + K+ S FP+ + T+N
Sbjct: 170 NAKDFGVPQNRERVFLIGVRKDLKIKSEWIFPEAM--------TLNN------------- 208
Query: 335 SITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMK 370
IT+RDAISDLP + Y + P+T +Q +++
Sbjct: 209 EITLRDAISDLPILGNNEQKYNYICEPRTEYQALLR 244
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query: 434 LKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNN--WQGVLGRLAWDESFD 491
L N +K +C+ ++ +G + L++ SRN+ Q ++ L + +
Sbjct: 222 LGNNEQKYNYICEPRTEYQALLRGNQT-----ELLNHVSRNHGERLQKIMRALGEGQGKN 276
Query: 492 MTGQ--KNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTI---VTTPNPLNKQGKILHP 546
+ ++ I+ L T+ NN + GRL WD+ TI ++TP+ L + +HP
Sbjct: 277 DINRMVEDGILDKDLYLTSGYNNTY----GRLWWDKPSTTITNNLSTPSSL----RCIHP 328
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLA 589
Q+R LT RE AR Q FPD+Y F GG+ + QIGNAVPP L+
Sbjct: 329 SQNRALTAREGARIQSFPDNYKFVGGLQAINTQIGNAVPPILS 371
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + L+ P +S+ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFKLL------EPSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ N ++ +Q +M+ S
Sbjct: 211 YLNHIQSSYQALMRKNS 227
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ G L W++ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGHLNWNKISPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|387821614|ref|YP_006301563.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|386654222|gb|AFJ17351.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 502
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI----QDDCNLVLK 175
L FSG GGL G +AG++ AA Y N +EC + + D L+
Sbjct: 125 ALSFFSGAGGLDLGFERAGIS------------AALYCENNRECRMTLHRNRPDVALLGD 172
Query: 176 -SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ + + +PQ E+D++ GPPCQ FS R E + + +L
Sbjct: 173 ITKISADEVRRMARIPQGREIDVMFGGPPCQAFSTAGARRAFEDPR--GNVFLRYLDLAS 230
Query: 235 LFQPKYIILENVTGLVHFN----------KNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+P+Y+++ENV GL+ + +++ I + L +M Y V+F++ + N+G
Sbjct: 231 ELKPRYLVIENVRGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGA 290
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
AQ R RVVI+A + G K + P H + + N NL + +T RD + D
Sbjct: 291 AQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPS---------WVTFRDVVYD 340
Query: 345 LPRVSQ 350
+ Q
Sbjct: 341 IEDSRQ 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+AWD T+VT+P + HP++ R L+V EY R QGFPD + G I D
Sbjct: 392 GFYRRIAWDRPSPTLVTSPT--MPATDLCHPKELRPLSVEEYKRVQGFPDDWWIAGSIHD 449
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+QIGNAVP L +AIG I+
Sbjct: 450 QYRQIGNAVPVSLGEAIGRAIL 471
>gi|420478963|ref|ZP_14977615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393096518|gb|EJB97116.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 351
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI+ +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTIIRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 415
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 34/232 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG +VE+ A+Y+ NF ++I C V + ++
Sbjct: 12 AVDLFAGAGGMSLGFEQAGF-DVLAAVEINPIHCATYEYNFPFWTII---CRSV--ADIR 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G + + +S + E+D++ GPPCQGFS + + R ++ +N L+F FL PK
Sbjct: 66 GE-EIRQLSALKNQEIDVVFGGPPCQGFSLMGK-RLIDDP--RNELIFHFLRLVLELNPK 121
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQV--TFDVLQSGNYGVAQSRNRVVILASK 297
Y ++ENV GL + L I + Y++ + +L + NYGV Q+R R+ +L K
Sbjct: 122 YFVMENVPGLALGQHKQFLDRIILEFNQKGYKIDNNYQILNAANYGVPQNRKRLFLLGGK 181
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS 349
LP P A S+ + TV +AI DLP V+
Sbjct: 182 KN--LPPLKYP-EAISD-------------------KKTTVWEAIQDLPEVN 211
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP R +TVRE AR +PD + F ++Q+GN+VPP LAKA
Sbjct: 311 TSPRPI-------HPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKA 363
Query: 592 IGYEIIKCIG-NAVPPPLAKAIGYE 615
I EII + V P K +G E
Sbjct: 364 IAQEIINTLEIQPVKPTEIKQLGKE 388
>gi|452840104|gb|EME42042.1| hypothetical protein DOTSEDRAFT_72966 [Dothistroma septosporum
NZE10]
Length = 1172
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 113 PLDTP----LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD 168
P D P LK + +F G G GL + G ++V+ S+ AN +
Sbjct: 667 PEDAPPRAKLKGMGIFCGGGTFDRGLEEGGGIDFRYAVDWAEHALHSHRANVANPDRVTY 726
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
V L ++ V+LP +V LI AG PC GFS+L + S+ +V +
Sbjct: 727 FLGSVNDCLADAMRGNRHVALPG--QVQLISAGSPCPGFSRLQTNMLSDDSRRNASMVAS 784
Query: 229 FLSFCDLFQPKYIILENVTGL---VHFNKNE-ILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
++F D + P+Y +LENV + + NK+E + I L+ + YQV ++ + +YG
Sbjct: 785 VVAFVDFYVPEYFVLENVVSMTSGMGRNKDENVFSQIIAALVGLGYQVQQFLMDAWSYGS 844
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS----------HAPYR 334
+Q R+RV I+AS G LP QP H+ ++ G + T+ P+
Sbjct: 845 SQQRSRVFIIASAAG--LPPLKQPQHSHAHPTDEPVGRALGKSTNGLSFGNRRNCFTPFE 902
Query: 335 SITVRDAISDLP 346
+ R A DLP
Sbjct: 903 HVNPRAATFDLP 914
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 527 FDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
F TI+T + +N G+ LH +Q R LTV E RAQG+ D V G K +GN+
Sbjct: 997 FPTIITRMAVSDGIN--GRWLHWDQPRALTVMEARRAQGYLDHEVLVGNAAQQLKIVGNS 1054
Query: 584 VPPPLAKAIG 593
V +A +G
Sbjct: 1055 VDRKVALVLG 1064
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSVHSHFELIWANDIDKDAILSYQANHKEVQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP + +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLP-RVSIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDDYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|381402080|ref|ZP_09926961.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
gi|380832889|gb|EIC12776.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
Length = 395
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 162/403 (40%), Gaps = 70/403 (17%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ +DLF+GCGG+ G AG + +VE + A +Y N Q+ V D +
Sbjct: 3 RIIDLFAGCGGMSLGFEMAGF-QSVLAVEKDAWAAETYQFNHQDTFVHVGDITEIANP-- 59
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + I+ GPPCQGFS L+ +R+ + + N L ++ F F P
Sbjct: 60 --------KQIFDYENISGIIGGPPCQGFS-LSGSRDPKDPR--NSLFMDYMRFVGDFNP 108
Query: 239 KYIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+ ++ENV G++ N + + I L Y V L + NYGV Q+RNR+ +
Sbjct: 109 SFFVMENVPGILSAKTKNGQLVKEVISSVALSHGYNVHILHLNAANYGVPQARNRIFFIG 168
Query: 296 SKPGYK-LPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGA 352
+ Y + + QP T+ P IT+ DAISDLP++ QG
Sbjct: 169 IRQDYSFIMRYLQP----------------EKITTDKP---ITLWDAISDLPQIEAGQGV 209
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ + PK +Q ++ S HI+++ RLI F +
Sbjct: 210 EVVDYADLPKNTYQAWCREHSNAIHNHISMKHTQ----------------RLIERFKCIE 253
Query: 413 W----RDLPNICVKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLV 468
W D+P + RG + Y+ + D K + + + Q N I P+
Sbjct: 254 WGQSVADVPEEHKQRKRGDATEISGKTYSQNNMRPRPD-KPAPTLPASFQSNFIHPYLHR 312
Query: 469 HTASR----------NNNWQGVLGRLAWDESFDMTGQKNTIIP 501
+ +R N ++G ++W+++ Q +P
Sbjct: 313 NFTAREGARLQSFPDNYIFKGKRTTMSWEKNLSQFQQIGNAVP 355
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 536 PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM--------YKQIGNAVPPP 587
P + Q +HP R T RE AR Q FPD+Y+F+G M ++QIGNAVPP
Sbjct: 298 PASFQSNFIHPYLHRNFTAREGARLQSFPDNYIFKGKRTTMSWEKNLSQFQQIGNAVPPL 357
Query: 588 LAKAIGYEI 596
LAKA+G I
Sbjct: 358 LAKALGLMI 366
>gi|384190309|ref|YP_005576057.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384191445|ref|YP_005577192.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340364182|gb|AEK29473.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 513
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVI----QDDCNLVLK 175
L FSG GGL G +AG++ AA Y N +EC + + D L+
Sbjct: 136 ALSFFSGAGGLDLGFERAGIS------------AALYCENNRECRMTLHRNRPDVALLGD 183
Query: 176 -SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ + + +PQ E+D++ GPPCQ FS R E + + +L
Sbjct: 184 ITKISADEVRRMARIPQGREIDVMFGGPPCQAFSTAGARRAFEDPR--GNVFLRYLDLAS 241
Query: 235 LFQPKYIILENVTGLVHFN----------KNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
+P+Y+++ENV GL+ + +++ I + L +M Y V+F++ + N+G
Sbjct: 242 ELKPRYLVIENVRGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGA 301
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISD 344
AQ R RVVI+A + G K + P H + + N NL + +T RD + D
Sbjct: 302 AQIRERVVIIAKRDGTKC-DWLIPTHTDPDGKYVQNWNLPS---------WVTFRDVVYD 351
Query: 345 LPRVSQ 350
+ Q
Sbjct: 352 IEDSRQ 357
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+AWD T+VT+P + HP++ R L+V EY R QGFPD + G I D
Sbjct: 403 GFYRRIAWDRPSPTLVTSPT--MPATDLCHPKELRPLSVEEYKRVQGFPDDWWIAGSIHD 460
Query: 576 MYKQIGNAVPPPLAKAIGYEII 597
Y+QIGNAVP L +AIG I+
Sbjct: 461 QYRQIGNAVPVSLGEAIGRAIL 482
>gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 356
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GG GL +AG+ K +VE+++ A +Y N E + + D +
Sbjct: 6 AVDLFSGAGGTTSGLKKAGI-KVAVAVEIDKWAAQTYRHNNPEVVLFEADIRDI-----S 59
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
G +SL ++ L+VA PPCQGFS + + + + +N L+F +L +P
Sbjct: 60 GKEIIDNISLKSSDKL-LLVACPPCQGFSTIGKK---DVNDERNQLIFEYLRLIQELKPD 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
++++ENV+G+ KN+ + F +++ NY +T++VL + +YGV Q R R+V+
Sbjct: 116 FLLMENVSGITS-KKNKQIFTRFLDMIESNYLITYEVLNTADYGVPQVRKRLVL 168
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+G+ HP QDR L+ RE AR Q F DSYVF G ++ KQIGNAVP LA+A G
Sbjct: 292 KGRFGHPTQDRALSAREAARLQSFDDSYVFLGNRGELAKQIGNAVPVKLAEASG 345
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 56/276 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQA-----GVAKPCWSV----ELERSEAASYDANFQECSVIQD 168
++ +DLFSG GGL G V + +++ E R A ++ N+ E ++I+D
Sbjct: 2 IEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPEITMIED 61
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
D + +S LK KG+S P+ VDL++ GPPCQ FS + + + +++K+
Sbjct: 62 DIANIDESFLK----SKGIS-PKG--VDLVIGGPPCQSFSTVGKRQYDKRAKMYR----E 110
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNE----ILQCIFHCLLKMN-------YQVTFDVL 277
+ QPK + ENV GL+ KNE I++ + ++ Y V ++
Sbjct: 111 YRRILSFIQPKMFVFENVYGLLTM-KNEQNGPIIRNVKESFNDLSSFGDVSGYNVYTKLI 169
Query: 278 QSGNYGVAQSRNRVVILASKPGYKLPS---FPQPLHAFSNQLFTINGNLVANKTSHAPYR 334
+ ++GV Q+R RV ++ + K+ S FP+ + +N+
Sbjct: 170 NAKDFGVPQNRERVFLIGVRKDLKIKSEWIFPEET-SLNNE------------------- 209
Query: 335 SITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMK 370
IT+RDAISDLP + Y + PKT +Q +++
Sbjct: 210 -ITLRDAISDLPILGNNEQKYNYICEPKTEYQALLR 244
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 11/98 (11%)
Query: 504 LVHTASRNNNWQGVLGRLAWDESFDTI---VTTPNPLNKQGKILHPEQDRVLTVREYARA 560
L T+ NN + GRL WD TI ++TP+ L + +HPEQ+R LT RE AR
Sbjct: 291 LYLTSGYNNTY----GRLWWDRPSTTITNNLSTPSSL----RCIHPEQNRALTAREGARI 342
Query: 561 QGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
Q FPD+Y F GG+ + QIGNAVPP L+ + I K
Sbjct: 343 QSFPDNYKFVGGLQAINTQIGNAVPPILSIHLANRIKK 380
>gi|448504090|ref|ZP_21613717.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445691180|gb|ELZ43372.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 403
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 36/256 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDAN---FQECSVIQDDCNLVL 174
L +DLF+G GGL GL +AG + +VE++ AS+ N + + QD +
Sbjct: 6 LTYVDLFAGAGGLSAGLERAGF-ELVHAVEVDDDARASFANNREGLEPDELTQDIREVDN 64
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ + K + + VDL+ GPPCQGFS++ + S +N L F+S+ +
Sbjct: 65 QDVTK---------VVGRDTVDLVAGGPPCQGFSEVVSP---DGSDDRNHLFVNFISWVN 112
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
PK + ENV G+ + + L + +M Y V++ V+++ ++GV Q R+R+++L
Sbjct: 113 ELDPKAALFENVRGMQNTAGGKFLDAVEESFGEMGYDVSYRVVEASDFGVPQQRHRLLVL 172
Query: 295 ASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
A+K + F F ++ P + V I DLP VS G
Sbjct: 173 ATK---------RSTTEFPFDGFELD-----------PIETPGVIAGIGDLPEVSPGEEK 212
Query: 355 YLFHNPPKTHFQRMMK 370
+ P T Q ++
Sbjct: 213 TEYDAEPATVIQDDLR 228
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G T IP L ++ +N++ RL E +T+ + +HP Q R LT
Sbjct: 256 GGNRTEIPDELQPSSGYHNSYS----RLDSQEPA-VAITSNMSKPSSARCIHPFQHRGLT 310
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR Q FPD Y F GG+ + KQIGNAVPP LA+++GY + + +
Sbjct: 311 PREGARLQTFPDWYRFDGGLVSVRKQIGNAVPPYLAESVGYYLKQSV 357
>gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
Length = 446
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLFSG GGL G QAG + E++ AA + NF C+V+ + + ++
Sbjct: 7 IDLFSGAGGLSLGFEQAGFDVRA-AAEIDPVHAAVHKFNFPNCAVLARSVVGLTAAEIR- 64
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ +L VD++ GPPCQGFS + R L+ + N LV F+ Y
Sbjct: 65 ----EAAALGPSDRVDVVFGGPPCQGFSMIGH-RVLDDPR--NRLVHEFVRLVHELDANY 117
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL L + + Y V + VL + ++GV Q R R+++L ++
Sbjct: 118 FLFENVKGLTVGKHRAFLDELVTAFRNVGYDVALPWQVLDAADFGVPQHRERLILLGARR 177
Query: 299 GYKLPSFPQPLHAFSNQL 316
G LP +P P +++L
Sbjct: 178 GLPLPVYPLPTTRPADRL 195
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ H + R +TVRE AR GFPD + F+ +QIGNAVPPPLA+A
Sbjct: 319 TSPRPI-------HYARPRCVTVREMARLHGFPDWFRFQWTKWHGARQIGNAVPPPLARA 371
Query: 592 IGYEIIKCIG 601
+ EI++ +G
Sbjct: 372 VAAEIVRALG 381
>gi|420425058|ref|ZP_14924122.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043645|gb|EJB44649.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 298
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSAHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
>gi|425457734|ref|ZP_18837432.1| DNA (Cytosine-5-)-methyltransferase [Microcystis aeruginosa PCC
9807]
gi|389800817|emb|CCI19917.1| DNA (Cytosine-5-)-methyltransferase [Microcystis aeruginosa PCC
9807]
Length = 408
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 21/260 (8%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
L +P +DLFSG GGL G AG P + ++ER +Y N ++ D +
Sbjct: 138 LGSPGIFVDLFSGAGGLALGFKWAGWL-PVIANDIERIAIETYAKNVDSSVIVGDIQDPE 196
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIV-AGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+ S + + V+ + L V GPPCQGFS R ++ + N L +
Sbjct: 197 ISSKI---SSMANVARQLNPDAKLFVLGGPPCQGFSTAGNPRSMQDGR--NSLFRNYTQI 251
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
L P + ENV GL++ + + + I L + Q++ L + +YG+ Q R RV+
Sbjct: 252 ITLINPDGFVFENVMGLLNMEQGRVFEQIKMVLESVTDQLSVWKLDTADYGIPQRRKRVI 311
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQ 350
++ K +L P P+ + G+ N P ++T +A+SDLP + SQ
Sbjct: 312 LVGLK--QQLQILPPPV---------VTGDSTENGLIDLP-SAVTTYEALSDLPPLESSQ 359
Query: 351 GANCYLFHNPPKTHFQRMMK 370
+ PP T +Q +M+
Sbjct: 360 DGESLDYIFPPATDYQELMR 379
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
Q RV++ RE AR Q FPD +VF G + QIGNAVPP L GY+I +G+
Sbjct: 90 QHRVISQREAARLQSFPDDFVFLGSRTAINTQIGNAVPPLL----GYQIALHLGS 140
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAG------VAKPCWSVE-LERS--EAASYDANFQECSVIQ 167
P +DLF+GCGGL GL AG V + + E L R+ + A+ N+
Sbjct: 2 PYTSIDLFAGCGGLSLGLHYAGWEGLFAVERDAMAFETLYRNMIDGAAAYPNYAAWPAWL 61
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
+ N+ L LL + + VDLIV GPPCQGFS R + + +N LVF
Sbjct: 62 EKTNIDLTKLLDNQQSRRQLR-ALSGTVDLIVGGPPCQGFSVGGRR---DGADERNKLVF 117
Query: 228 TFLSFCDLFQPKYIILENVTGLV--------HFNKNEILQCIFHCLLKMNYQVTFDVLQS 279
L +L +P+ +++ENV G+ H + + + ++ Y T+ V+ +
Sbjct: 118 KMLELVELVRPRAVLIENVEGIARRFVAKPGHSQSAPVAELVIQEFERLGYVGTYTVVSA 177
Query: 280 GNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLF--TINGNLVANKTSHA-PY-RS 335
++GV Q+R RV ILA + L S A +LF ++ + V + H P R
Sbjct: 178 VDFGVPQTRRRVAILAVRDADGLSS------AGLKRLFERSLADSAVRVRNHHGLPLDRP 231
Query: 336 ITVRDAISDL 345
ITV +A+ DL
Sbjct: 232 ITVGEALDDL 241
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 529 TIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGIC--------DMYK-- 578
TI T P+ + +H + R +TVRE AR Q FPD Y F G D+ +
Sbjct: 335 TITTHPD------EFIHFAEPRNVTVREMARLQSFPDDYRFYGRYTINGPRRKHDVARCS 388
Query: 579 QIGNAVPPPLAKAIGYEI 596
Q+GNAVPP L + +G I
Sbjct: 389 QVGNAVPPMLGQGLGLAI 406
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + +Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L+VRE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSVREGARLQSFPDNYKFCGSTSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|406916736|gb|EKD55687.1| hypothetical protein ACD_59C00074G0004 [uncultured bacterium]
Length = 341
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 27/188 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV----LK 175
+DLFSGCGGL EG+ +AG A+ VE+++ A Y N E VI +D + LK
Sbjct: 6 AIDLFSGCGGLSEGMKKAG-AQVIACVEIDKVAAECYKINHPETLVINEDIRKIKHNKLK 64
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAG-PPCQGFS---QLNRARELEKSKLKNGLVFTFLS 231
LL G H I+AG PPCQGFS LN+ ++ + N L+ +
Sbjct: 65 RLLAGKPVH-------------ILAGCPPCQGFSTVRMLNKTVAIDDER--NDLILEYYR 109
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
F +P ++ENV L ++ ++ L KM Y + +DV+ NYGV Q R R+
Sbjct: 110 FIKEIKPLTFMMENVPALKNY---DLFLTTVKKLEKMGYFIDYDVVDIQNYGVPQRRKRL 166
Query: 292 VILASKPG 299
++L S G
Sbjct: 167 IMLGSILG 174
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 514 WQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
+ V GRL WD TI T LN +G+ LHPE++R ++ RE A Q FP Y F G
Sbjct: 249 FHDVYGRLKWDSVSSTI--TGGCLNPSKGRYLHPEENRCISAREAALLQTFPRDYKFPEG 306
Query: 573 I--CDMYKQIGNAVPPPLAKAIGYEIIK 598
I ++ IGNA+PP ++ II+
Sbjct: 307 ITKTEIALLIGNALPPEFSRIQTANIIE 334
>gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 416
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+ LFSG GGL GL QAG + VE + + + N E + ++ + ++
Sbjct: 29 VVSLFSGAGGLDIGLEQAGF-RTAVCVENDLNCRTTLRHNRPEWLLFDHPTKVLNEKIIT 87
Query: 180 ---GHTQHKGV------SLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
G +H + + +V L+V G PCQ FS + + +E E L F+
Sbjct: 88 RAPGDIRHIDAEELLEFAGLKPGKVALVVGGAPCQPFSNIGK-KEGENDAKNGDLFLEFV 146
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
QP+ I ENV G++ +++LQ +F Y +++ +L + NYGV Q R R
Sbjct: 147 RMVKGIQPEAFIFENVAGIIQSKHSKVLQYMFEQFQGSGYGLSYALLNAANYGVPQRRER 206
Query: 291 VVILASKPGYKLPSFPQPLHAFSN---QLFTINGNLVANKTSHAPYRSITVRDAISDLPR 347
+++ K G K P+FP P H Q F + V N P + ++V+DA S LP+
Sbjct: 207 FILIGMK-GIKEPAFPLPTHMKDQAAWQNFVKELDQVPN---FIPQKWVSVKDAFSRLPK 262
Query: 348 VSQGANCYLFHNPPKTHFQRM 368
+ N Y+ N RM
Sbjct: 263 DYKSRNDYVVMNISDVVKHRM 283
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 489 SFDMTGQKNTIIPWSLVHTASRNNNWQG--VLGRLAWDESFDTIVTTP-NPLNKQGKILH 545
+F G+ ++P L ++ QG GRL D TI T NP +G +H
Sbjct: 284 TFISQGKNFKVLPMELRPNCWKSGKHQGNDTFGRLVADLPSVTIRTAAYNP--AKGMYIH 341
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGG------ICDMYKQIGNAVPPPLAKAIGYEIIKC 599
P +DR L + E A Q FP + ++ + KQIGNAVPP LA+A+G I K
Sbjct: 342 PFEDRGLDIIEMAILQDFPLEWEYKTSGREKVTLVSGGKQIGNAVPPGLARALGLAIRKQ 401
Query: 600 I 600
I
Sbjct: 402 I 402
>gi|154277578|ref|XP_001539629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413214|gb|EDN08597.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 699
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D F G GG+ G QAG+ + W + S S+ NF+ D V L H
Sbjct: 327 DGFCGAGGVSRGALQAGL-RLNWGFDHSVSAMDSFRLNFETAIGYTSD---VADFLANSH 382
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
T+ VD++ PPCQ FS +F + +P+ +
Sbjct: 383 TEIM---------VDILHFSPPCQTFSPAKTVAAAMDDD-NEACIFCTRGLLEATKPRVV 432
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
+E GL E L H +++ Y V + +L +YGV QSR R+VILAS PG
Sbjct: 433 TMEETAGLQQ-RHEEFLFATIHSFVELGYSVRWKLLNCRDYGVPQSRQRLVILASGPGEP 491
Query: 302 LPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
LP FP+P HA N N P+R T+ DAIS +P
Sbjct: 492 LPPFPKPTHASPNTQV----NTTITTALLPPFR--TIHDAISKIP 530
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
G+ HP R T RE A Q FP + F G + +QIGNAVPP L KAI
Sbjct: 565 GENYHPSGTRGFTYRELACLQTFPLEHRFCGK--SVKRQIGNAVPPMLGKAI 614
>gi|189500352|ref|YP_001959822.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1]
gi|189495793|gb|ACE04341.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides BS1]
Length = 420
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 86/370 (23%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVA---------KPC----------WSVELERSE-- 152
+++ LK LDLF+G GGL EG +AG C W E R E
Sbjct: 1 MNSKLKFLDLFAGAGGLSEGFIRAGFEPVAHVESDQAACFTLQTRIGYHWLNERRRIEQY 60
Query: 153 ------AASYDANFQEC--SVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPC 204
A S +A ++ VI N + ++ + + +L H +DLIV GPPC
Sbjct: 61 AEYLKGAISREAFYEYVPRQVIDSVINAEISAITLPYIFRRVDALLGNHSLDLIVGGPPC 120
Query: 205 QGFSQLNRARELEKSK--LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNK-------N 255
Q +S + R+R+ + K +N L + F ++P Y + ENVTGL+ N
Sbjct: 121 QAYSVIGRSRDKNRMKGDKRNYLYTYYAEFLKRYKPSYFLFENVTGLLSARDDDGSLYFN 180
Query: 256 EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQ 315
+ F C Y+ + L + +YGV Q R R VIL K G + +P+P Q
Sbjct: 181 TMRDLFFDC----GYETEYMALSASDYGVLQRRKR-VILVGKKGRQTGFYPEP------Q 229
Query: 316 LFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN----CYLFHNPPKTHFQRMMKD 371
+ N + V + DLP +S G C T+ KD
Sbjct: 230 KWNPN---------------VKVSEVFEDLPVISAGEGDVGPC-----ATNTYSGTWQKD 269
Query: 372 -GSRIHDIHINLRELL----QD-HICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPR 425
G RI D+ + + QD I +I+ L R + D+ LP +K R
Sbjct: 270 AGVRIEDLPVTWHQARPHNKQDLEIYRIVVDLWNRNKRRL------DYNSLPE-QLKTHR 322
Query: 426 GQHSYTEKLK 435
+HS+ ++ K
Sbjct: 323 HRHSFLDRFK 332
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 544 LHPE--QDRVLTVREYARAQGFPDSYVFRG-----GICDMYKQIGNAVPPPLAK 590
+HP+ Q+R +T RE AR Q FPD Y F Y+QIGNAVP LA+
Sbjct: 356 IHPDINQNRSITPREAARLQTFPDDYYFESSSGSPARTSAYRQIGNAVPVLLAQ 409
>gi|448485280|ref|ZP_21606564.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445818256|gb|EMA68116.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 403
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 30/253 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF+G GGL GL +AG + +VE++ AS+ AN +E ++ + K
Sbjct: 6 LTYVDLFAGAGGLSVGLERAGF-ELVHAVEVDDDARASF-ANNREGLEPEELTQDIRKVD 63
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ T+ G + VDL+ GPPCQGFS++ + S +N L F+S+ +
Sbjct: 64 NQDVTEVVG-----RDTVDLVAGGPPCQGFSEVVSP---DGSDDRNHLFVNFISWVNELD 115
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK + ENV G+ + + L + +M Y V++ V+++ ++GV Q R+R+++LA+K
Sbjct: 116 PKAALFENVRGMQNTADGKFLDAVEESFGEMGYDVSYRVVKASDFGVPQQRHRLLVLATK 175
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLF 357
+ FP F F ++ P + V I DLP V G +
Sbjct: 176 --HSTTEFP-----FDG--FELD-----------PIETPGVIAGIGDLPEVGPGEEKTEY 215
Query: 358 HNPPKTHFQRMMK 370
P T Q ++
Sbjct: 216 DAEPTTVIQDDLR 228
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G T IP L ++ +N++ RL E +T+ + +HP Q R LT
Sbjct: 256 GGNRTEIPDELQPSSGYHNSYS----RLDSQEPA-VAITSNMSKPSSARCIHPFQHRGLT 310
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR Q FPD Y F GG+ + KQIGNAVPP LA+++GY + + +
Sbjct: 311 PREGARLQTFPDWYRFDGGLVSVRKQIGNAVPPYLAESVGYYLKQSV 357
>gi|400292323|ref|ZP_10794277.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
gi|399902570|gb|EJN85371.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
Length = 364
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 23/199 (11%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVA-KPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
++ LDLF+G GGL G A + +VE++ AASY A F + V +
Sbjct: 6 IRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTDVY---AGAIQDW 62
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L +G ++P VD++V GPPCQGFS L + R+ E ++ N L +
Sbjct: 63 LAEG-------TIPAG--VDVVVGGPPCQGFSTLGK-RDAEDAR--NRLWEQYAQVIQRA 110
Query: 237 QPKYIILENVTGLVHFNKN----EILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
+PKY ++ENV F K+ + L +Y F VL + +YG Q+R R V
Sbjct: 111 RPKYFVVENVPA---FGKSPQYRDFLAATRPGEFLEDYSFDFRVLNAADYGAPQARRRAV 167
Query: 293 ILASKPGYKLPSFPQPLHA 311
++ + +P FP+P H+
Sbjct: 168 LIGHRYDMAVPGFPEPTHS 186
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 497 NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVRE 556
N P L HT+ + V+GRL WD TI T K G+ LHP ++R +T E
Sbjct: 266 NLKAPCWLRHTSGSMD----VMGRLHWDRPSVTIRTEFFKPEK-GRYLHPVENRAITHYE 320
Query: 557 YARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
A QGFPD++ F G + +QIGNAVP PL AI +++
Sbjct: 321 AALLQGFPDTHRFIGSRTSIARQIGNAVPIPLGAAIARQVL 361
>gi|420465164|ref|ZP_14963931.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082651|gb|EJB83367.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKEAQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 75/297 (25%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGV-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Query: 354 ----CYL------------------FHNPPKTH-----FQRMMKDGSRIHDIHINLR 383
YL H+ PK + +M+KDG D+ NLR
Sbjct: 200 GDALGYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQMLKDGQSKDDLPKNLR 256
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L+VRE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSVREGARLQSFPDNYKFCGSTSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|410463769|ref|ZP_11317264.1| DNA-methyltransferase Dcm [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983109|gb|EKO39503.1| DNA-methyltransferase Dcm [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 416
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 30/244 (12%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P+ K + LFSG GGL G +AG ++EL+R + N + VI++D
Sbjct: 6 PVGNTFKTISLFSGIGGLDFGFEEAGFETRV-ALELDRYACQAIRLN-RPWEVIENDIAQ 63
Query: 173 VL-KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN---RARELEKSKLKNGLVFT 228
V K +L + G+ + E D+++ GPPCQ FS+ + R L + +
Sbjct: 64 VSSKEIL----ERSGLGV---GEADMLIGGPPCQPFSKSSYWVRGDSLRLDDPRADTLTG 116
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMN------YQVTFDVLQSGNY 282
+L +P+ +LENV GL + K+E L+ I + ++N Y+V++ V+ + Y
Sbjct: 117 YLRVLRDTRPRAFLLENVYGLAYQGKDEGLRHILDGIAQINKETGENYEVSWKVINTAEY 176
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFS-NQLFTINGNLVANKTSHAPYRSITVRDA 341
GV Q R RV ++ S+ G K FPQ HA ++ ++ G+L PYR T DA
Sbjct: 177 GVPQIRERVFMVGSRDGVKF-RFPQATHAGGKSKSLSLLGDL-------EPYR--TAWDA 226
Query: 342 ISDL 345
+ DL
Sbjct: 227 LGDL 230
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 549 DRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+R LT +E R Q FPD V G +M + +GNAVP +A+ + EI
Sbjct: 308 NRRLTFKELCRIQTFPDGLVLDCGRTEMQRMLGNAVPSLIAEVLAREI 355
>gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 417
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 40/260 (15%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
M + L LDLF+GCGGL EG Q+G +VE ER+ + Q D N
Sbjct: 1 MKRNVVLNTLDLFAGCGGLTEGFLQSGHYHTIGAVEWERAPRETLKHRLQTAWGYNDADN 60
Query: 172 LVLK-------SLLKG-----HTQHKGV-SLPQKHEVDLIVAGPPCQGFSQLNRARELE- 217
+V++ L+ G + H+G+ +L VD+I+ GPPCQ +S R R+
Sbjct: 61 VVVRFDIQRTEELIHGFDDPVYGLHEGLENLVGGRAVDVIIGGPPCQAYSLAGRIRDEHG 120
Query: 218 -KSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF--NKNEILQCIFHCLLKMNYQVT- 273
++ +N L ++ F+PK+ + ENV GL+ + I I Y VT
Sbjct: 121 MRNDYRNYLFECYVKIVKYFKPKFFVFENVVGLLSAAPDGTLITSRISEAFNGAGYVVTP 180
Query: 274 ------FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLF-TINGNLVAN 326
FDV +YG+ Q R RV+IL G + L +F + ++ G
Sbjct: 181 NFKTALFDV---ADYGIPQHRKRVIILGISKGLFGDKCGKMLDSFYTCILPSLKG----- 232
Query: 327 KTSHAPYRSITVRDAISDLP 346
++ V DAISDLP
Sbjct: 233 -------KARNVHDAISDLP 245
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 532 TTPNPLNKQG-KILHP--EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
T P L K G + +HP EQ R +T RE AR Q FPD + F G YK IGNAVP
Sbjct: 335 TIPAHLFKDGMRHIHPDPEQARSITPREAARLQTFPDDFEFLGAAMYQYKMIGNAVPVDF 394
Query: 589 AKAIGYEIIK 598
+K I + K
Sbjct: 395 SKIIAEALYK 404
>gi|390456269|ref|ZP_10241797.1| cytosine-specific methyltransferase [Paenibacillus peoriae KCTC
3763]
Length = 379
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
L LFSG GG+ G +AGV WS EL++ +Y+AN E ++ + D L
Sbjct: 7 LSLFSGAGGMDVGFKKAGV-NIVWSNELDKDACNTYEANHPESTLFRGDIRNAFNEL--- 62
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+KG D+I GPPCQGFS A +++ + ++ L++T+L + +PK
Sbjct: 63 -EAYKGT--------DIIFGGPPCQGFSV---AGKMDPNDERSTLIWTYLDVVRIIKPKA 110
Query: 241 IILENVTGLVHFNK-NEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+LENV+ L K ++ +F +M Y +L S NYGV Q R RV +
Sbjct: 111 FVLENVSALAKLEKWKDVRTKMFQIANEMGYSCYPFLLNSSNYGVPQKRERVFFIG 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
P + R +T++E A Q FP+ Y+F+G +Y+QIGNAVP LA+A+ +I
Sbjct: 293 PSRLRRITLKEAALIQTFPEDYIFKGSKSAVYRQIGNAVPCLLAQAVASAVI 344
>gi|420468527|ref|ZP_14967269.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393088208|gb|EJB88860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 352
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGV-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
Length = 479
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 27/186 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV------IQDDCNLV 173
+DLFSGCGG+ GL +AG +VE++++ A++Y AN++ + I+ ++
Sbjct: 6 AIDLFSGCGGMTSGLIKAGF-NVIAAVEIDKNAASAYRANYKSNKIKLFEKDIRQVSSMD 64
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFS---QLNRARELEKSKLKNGLVFTFL 230
+ LL+G H L+ PPCQGFS +LNR +E +N LV +L
Sbjct: 65 IYELLEGDVLH------------LLAGCPPCQGFSSIRRLNRDEYIEDE--RNNLVLEYL 110
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
F +P I+LENV L K Q + + K+ Y V ++ +YGV Q+R R
Sbjct: 111 RFVKELKPLTIMLENVPAL---EKYSTFQSVVEKIKKLGYFVEVKIVNVASYGVPQNRKR 167
Query: 291 VVILAS 296
+V++ S
Sbjct: 168 LVMIGS 173
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 502 WSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLN-KQGKILHPEQDRVLTVREYARA 560
++L N + V GRL WD TI T LN +G+ LHP ++R +T RE A
Sbjct: 239 YTLECHKKENIGFHDVYGRLRWDAPSSTI--TGGCLNPSKGRFLHPSENRCITAREAAML 296
Query: 561 QGFPDSYVF--RGGICDMYKQIGNAVPP 586
Q F ++F + + IGNA+PP
Sbjct: 297 QTFDRDFMFPVELSLSSLALMIGNALPP 324
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ +++R SY AN +E C + Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSIHPYFELIWANDIDRDAILSYQANHKEAQTILCDIAQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYVLEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGTLKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLHPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q F D+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFSDNYKFCGSASTKRLQIGNAVPPLLSVALAQAVF 343
>gi|453067043|ref|ZP_21970333.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
gi|452767430|gb|EME25670.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
Length = 431
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
L FSGCGG+ EG AG + + +E+ A++D NF + +D + ++ +K
Sbjct: 93 VLTAFSGCGGMAEGFRMAGFSVEGY-IEVVPEARATFDRNFPGAKCLGEDIRAIDEARVK 151
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
L + +D++ GPPCQGFS R ++ +N L L DL +PK
Sbjct: 152 --------DLLAQVNIDVLAGGPPCQGFSLAGR---RDRDDPRNHLFRNLLELADLVRPK 200
Query: 240 YIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+++ENV L+ + ++ I + Y + + + + +YGV Q R RV I+A+
Sbjct: 201 VVVMENVRLLLSMKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVAT 260
Query: 297 K--PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
+ G FP H +NG AP R T RDA DL + G C
Sbjct: 261 RRDSGIGPLRFPPKTHG-------VNG--------VAPLR--TFRDATVDLAPLESGQAC 303
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WDE T+ TT ++ + +HP+ R LTVRE AR Q FPD YVF G +
Sbjct: 351 RLRWDEPASTVGTTFGMISAS-RNVHPKHTRSLTVREAARLQTFPDDYVFEGKWGAVRTM 409
Query: 580 IGNAVPPPLAKAIGYEIIKCIG 601
IGNAVPP LA + EI K +G
Sbjct: 410 IGNAVPPQLASVLAGEIKKALG 431
>gi|386750285|ref|YP_006223492.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum]
gi|384556528|gb|AFI04862.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 381
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
PLK LDLF+G GG +G A + E+++ A SY N + +I D N LK
Sbjct: 3 PLKVLDLFAGVGGFSKGFENANF-NIVLANEIDKEIAYSYKENHKNTIMIDSDINDFLKH 61
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLN-RARELEKS----KLKNGLVFTFLS 231
T+ K + ++D+I+ G PCQGFS R R+ ++ +N L +
Sbjct: 62 YHNLETKDK----EKCKDIDVIIGGSPCQGFSMAGARIRQNKQDCFIDDKRNYLFRKYFE 117
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMN------YQVTFDVLQSGNYGVA 285
F+PK+ + ENV GL NK ILQ I N Y + V + GV
Sbjct: 118 VIQAFEPKFFVFENVVGLASMNKGAILQEIESLFSNGNNFKQGKYYLYKKVFEVNKIGVP 177
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYR---SITVRDAI 342
Q+R R++IL SK + NG + K + S T++DAI
Sbjct: 178 QNRKRLIILGSKTPF-------------------NGEEMIKKVRQKNSKFNQSNTIKDAI 218
Query: 343 SDLP 346
SDL
Sbjct: 219 SDLA 222
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 516 GVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGG 572
G GRL +++ TI T TP+ G+ +HP DR +T+RE AR Q F D ++F G
Sbjct: 294 GAYGRLEYNKQAVTITTRFDTPSA----GRFIHPLFDRTITIREAARLQSFRDDFIFYGS 349
Query: 573 ICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+ KQIGNAVPP L + +G I + I
Sbjct: 350 KTSICKQIGNAVPPYLGEFLGLMIKEII 377
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
Length = 326
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 110 FPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
FP ++ + +DLF+G GG G G K +S E+++ +Y +NF + + D
Sbjct: 11 FPNNENSKYRMIDLFAGIGGTRLGFHLTGEVKVVFSSEIDKFAKKTYKSNFSDEPL--GD 68
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
+ + H D++VAG PCQ FSQ + + E + L F
Sbjct: 69 IREINSEDIPNH--------------DILVAGFPCQAFSQAGKKKGFEDER--GALFFEI 112
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+ +PK +LENV L NK E L+ I L +NY +T+ VL+S ++G+ Q+R
Sbjct: 113 IRILKDKKPKTFLLENVKNLRTHNKGETLKVIEQHLKDLNYHITYKVLKSRDFGIPQNRE 172
Query: 290 RVVILA 295
R+ I+
Sbjct: 173 RIYIVG 178
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R LT RE AR QGFPD+++ YKQ GN+V P+ AI EI+K +
Sbjct: 274 RKLTPREAARLQGFPDNFLIPVSDNQAYKQFGNSVTVPVIFAIAKEILKVL 324
>gi|425459078|ref|ZP_18838564.1| Modification methylase XorII [Microcystis aeruginosa PCC 9808]
gi|389823277|emb|CCI28673.1| Modification methylase XorII [Microcystis aeruginosa PCC 9808]
Length = 426
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVGEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LTKTIDFNSAKKSAFTS--VYDAISDL 212
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEII 597
+G ++
Sbjct: 366 LGSSVM 371
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSSSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|422303770|ref|ZP_16391121.1| Modification methylase XorII [Microcystis aeruginosa PCC 9806]
gi|389791235|emb|CCI12952.1| Modification methylase XorII [Microcystis aeruginosa PCC 9806]
Length = 420
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVPMAKYP------------LTKTVDVNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L+VRE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSVREGARLQSFPDNYKFCGSTSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 58/340 (17%)
Query: 122 DLFSGCGGLMEGLCQAGV----AKPCWSVELERSEAASYDANFQECS---------VIQD 168
++F G GGL G G A W + L + ++DA + S ++
Sbjct: 38 EVFCGIGGLSRGFHSLGFEPKFANDVWPLALY-NFLMNFDATYAATSGTHHGDILGLVGS 96
Query: 169 DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
++ + +L + G + E+D+++ GPPCQGFS + R ++ +N L
Sbjct: 97 VEDISISDILPKISSSSGEGSLKVGEIDVLLGGPPCQGFSLNSHVRSVQDP--RNYLFRH 154
Query: 229 FLSFCDLFQPKYIILENVTGLV-----HFNKNEILQCIFHCLLKM-NYQVTFDVLQSGNY 282
++ PK +LENV G++ HF + + + + Y+V F +L + +Y
Sbjct: 155 YVRLLKGLSPKIFVLENVPGMLSLEGGHFFEEFLREVSLSTTVDCPGYEVRFKILNAAHY 214
Query: 283 GVAQSRNRVVILASKPGYK----LPSFPQPLHAFSNQLFTINGNL-------------VA 325
GV Q R RVV++ ++ + S P P H Q G
Sbjct: 215 GVPQERFRVVVVGTRKDVADRAGVVSLPIPHHFSLAQAHFKGGRTHTFHYAIGRGKHPST 274
Query: 326 NKTSH-----APYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHI 380
++ SH P+ +TV DAI DLP+++ G N + + KD ++
Sbjct: 275 DQISHIGPQLEPF--VTVIDAIGDLPKLTNGGG----ENVGRYGYN---KDAPQLSKYQQ 325
Query: 381 NLR---ELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
N+R ELL +H C+ L P RI+ IP+ DWR +P
Sbjct: 326 NMRSDGELLANHWCRALYPPNTERIKHIPA--GGDWRSIP 363
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQGFPDSYVFRGGICDM 576
GRL+ + T++T P+P G +H + Q R+++VRE AR Q FPD +VF GG D
Sbjct: 384 GRLSPTQLAGTLLTKPDP--HWGTFIHYDLAQQRLISVREAARIQSFPDRHVFYGGQVDQ 441
Query: 577 YKQIGNAVPPPLAKAIGYEI 596
Y+ GNAVPP +A+AI ++
Sbjct: 442 YRLCGNAVPPLMAQAIAKQV 461
>gi|420448488|ref|ZP_14947368.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393065842|gb|EJB66670.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 222
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGVGGLSYGFSTRPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCIP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGTHKSFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
>gi|443245224|ref|YP_007378449.1| cytosine-specific methyltransferase [Nonlabens dokdonensis DSW-6]
gi|442802623|gb|AGC78428.1| cytosine-specific methyltransferase [Nonlabens dokdonensis DSW-6]
Length = 410
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 47/299 (15%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD--- 168
M + +DLF+GCGGL GL +G+ K +++E +++ N E + D
Sbjct: 1 MKMSEKKTYIDLFAGCGGLSLGLYNSGLWKGLFAIEKSPDAFETFNYNLIEKNNHFDWPN 60
Query: 169 -------DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL 221
D N ++K+ +G ++D++ GPPCQGFS + E + L
Sbjct: 61 WLPKSNHDINAIIKNYPNELKSLRG-------KIDMVAGGPPCQGFSTAGKRNE---NDL 110
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVH-FNKNEILQCIFHCLLK------------M 268
+N L+ +++ F QPK I ENV G F+KN+I ++ +K +
Sbjct: 111 RNKLIKSYIRFIRKVQPKVIFFENVKGFTQKFDKNKIQGKVYSEYVKSALGYTPKDKKYL 170
Query: 269 NYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKT 328
Y+V ++ YGV Q R R +++ + + P F + + + + NK
Sbjct: 171 GYKVEGRLVDFSEYGVPQKRTRFILVGIRKDIVKNTKPT---DFFDSIRSERKKFLINKG 227
Query: 329 SHAPYRSITVRDAISDLPRVSQ------GANCYLFHNPPKTHFQRMMKD--GSRIHDIH 379
+ ++ DAISDL R+++ + +N PK+ +Q+++K +I D H
Sbjct: 228 IGL---TNSLEDAISDLLRINETMSPDTASFKAGLYNRPKSEYQKLLKGNYSEKIPDSH 283
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICD----------MYKQIGNAVPPPLAKAIG 593
+H + R+ TVREYAR Q F D Y F+G Y QIGNA+PP + G
Sbjct: 344 VHYCEPRIFTVREYARIQSFDDWYEFKGKYTTGGKRRTQEVPRYSQIGNAIPPLFGEQAG 403
Query: 594 YEIIKCI 600
I I
Sbjct: 404 ITINNLI 410
>gi|420433643|ref|ZP_14932651.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420507397|ref|ZP_15005910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420509085|ref|ZP_15007587.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420532834|ref|ZP_15031197.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420534397|ref|ZP_15032748.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536203|ref|ZP_15034545.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420537907|ref|ZP_15036237.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420541394|ref|ZP_15039702.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|420542914|ref|ZP_15041209.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393051171|gb|EJB52124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393119478|gb|EJC19969.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393120511|gb|EJC21000.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393140465|gb|EJC40838.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393142620|gb|EJC42974.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393143851|gb|EJC44195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393145462|gb|EJC45793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393148014|gb|EJC48338.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393159977|gb|EJC60226.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 351
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YG Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGAPQVRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGT-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSSSAKRLQIGNAVPPLLSVALVHAVF 343
>gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018 = JCM 11026]
gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
Length = 333
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K L LFSGCGGL G +AG P + E +++ ++ N + +I+ D V K+
Sbjct: 1 MKVLSLFSGCGGLDLGFEKAGFEIPV-ANEFDKTIWDTFKINHPKTHLIEGDVRKVSKN- 58
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+S +D I+ GPPCQ +S+ R ++ + K L F ++ F+
Sbjct: 59 --------DISEYLSGNLDGIIGGPPCQSWSEAGSLRGIDDDRGK--LFFDYIRILKDFK 108
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ + +Q I H Y V ++ + +YGVAQ R RV + +
Sbjct: 109 PKFFLAENVSGMLANRHSSAVQNILHLFNDAGYDVNLTLVNAKDYGVAQDRKRVFYIGFR 168
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ SFP+ ++ + +T++D I DL + A
Sbjct: 169 KDLNIKFSFPKG-------------------STEDDEKKLTLKDVIWDLQDTAIPARERN 209
Query: 357 FHNP 360
HNP
Sbjct: 210 HHNP 213
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDM-YKQIGNAVPPPLAKAIGYEIIKCI 600
R +T+RE AR QGFPD++ F D YK IGNAVP LA I I K +
Sbjct: 281 RRMTIREIARIQGFPDNFKFIYDSLDTGYKMIGNAVPVNLAFEIATAIKKVL 332
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSKHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ SF Q H FS + T +++DA+ DLP + G N
Sbjct: 162 VGIH-----KSFKQKFH-FSKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
VL++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 VLSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|161789274|ref|YP_001595753.1| methyl transferase [Vibrio sp. 09022]
gi|161761495|gb|ABX77139.1| methyl transferase [Vibrio sp. 09022]
Length = 421
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 111/268 (41%), Gaps = 48/268 (17%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K L FSG GL GL AG +P + E+++ + N E VI D + + +
Sbjct: 1 MKYLSFFSGALGLDLGLESAGF-EPLLACEIDKDCKETIKTNKPELPVIGDIRDYTAQQI 59
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ L Q EVDL+V GPPCQ FS + E + + +L
Sbjct: 60 ------REIAGLTQDEEVDLVVGGPPCQAFSTAGARKSFEDER--GNVFLKYLEIATEIA 111
Query: 238 PKYIILENVTGLV-----HFNKNE----------------ILQCIFHCLLKMNYQVTFDV 276
PKYI++ENV GL+ H N+ L I L Y V+F++
Sbjct: 112 PKYIVIENVRGLLSAPLKHRPHNKRGSEYPDLGSDEKPGGALAYIIKFLEMAGYGVSFNL 171
Query: 277 LQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSI 336
S N+G Q R RVVI+AS+ G KLP + P H+ + SH
Sbjct: 172 YNSANFGTPQVRERVVIIASRDGKKLP-YLVPTHSETG--------------SHNLPSWT 216
Query: 337 TVRDAISDLPRVSQGANCYLFHNPPKTH 364
T R AI L + A C F P K H
Sbjct: 217 TTRSAIESLSK-EDNAECLEF--PKKRH 241
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+ WD+ T+VT+P + + HP++ R L+V EY Q FP + F+G
Sbjct: 277 GFYRRVPWDKPSPTLVTSP--IMPATSLAHPDELRPLSVAEYGALQQFPKDWEFKGKTLS 334
Query: 576 MYKQIGNAVPPPLAKAIG 593
Y+QIGNAVP L AIG
Sbjct: 335 KYRQIGNAVPCGLGSAIG 352
>gi|225561042|gb|EEH09323.1| C-5 cytosine methyltransferase DmtA [Ajellomyces capsulatus G186AR]
Length = 650
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D F G GG+ G QAG+ + W + S S+ NF+ D V L H
Sbjct: 327 DGFCGAGGVSRGALQAGL-RLNWGFDHSVSAMDSFRLNFETAIGYTSD---VADFLASSH 382
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
T+ VD++ PPCQ FS + + +F + +P+ +
Sbjct: 383 TEIM---------VDILHFSPPCQTFSPA-KTVAAAMDEDNEACIFCTRELLEATKPRVV 432
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
+E GL E L H +++ Y V + +L +YGV QSR R+VILAS PG
Sbjct: 433 TMEETAGLQQ-RHEEFLFATIHSFVELGYSVRWKLLNCRDYGVPQSRQRLVILASGPGEP 491
Query: 302 LPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
LP FP+P H N N + P+R T+ DAIS +P
Sbjct: 492 LPPFPKPTHTSPNTQI----NTTISTALLPPFR--TIHDAISKIP 530
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
G+ HP R T RE A Q FP + F G + +QIGNAVPP L KAI
Sbjct: 565 GENYHPSGTRGFTYRELACLQTFPLEHRFCGK--SVKRQIGNAVPPMLGKAI 614
>gi|448434340|ref|ZP_21586150.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445685256|gb|ELZ37611.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 392
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT 182
FSGCGGL G +AG S + E + A +Y NF + +++D + + ++
Sbjct: 27 FFSGCGGLDLGFERAGFDVALGSDQWEPA-AETYRRNFSDVGFVEEDVRELDAAAIRESV 85
Query: 183 QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR----ELEKSKLKNGLVFTFLSFCDLFQP 238
+ G VD+++ GPPCQGFS+LN + E+EK + +N L FL + +P
Sbjct: 86 ERAGYD---PGGVDVVIGGPPCQGFSRLNNEQIELDEMEKDR-RNTLFEEFLRVVSVLEP 141
Query: 239 KYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+ +++ENV L++ ++ + I Y+ + VL++ YGV Q R R+ +
Sbjct: 142 QLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMG 201
Query: 296 SKPGYKLPSFPQP 308
+ + FP+P
Sbjct: 202 TDRDVPI-RFPEP 213
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
+HP +DR LT RE AR Q FPD + F G D+ KQIGNAVP L + + +I +
Sbjct: 312 FIHPHEDRYLTPREMARLQTFPDEFAFEGTKTDVLKQIGNAVPVRLGEELATQIREYFPE 371
Query: 603 AVPPPLAKAIGYE 615
P A YE
Sbjct: 372 VRDAPPADPDVYE 384
>gi|420501298|ref|ZP_14999842.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393150104|gb|EJC50412.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 351
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ +++R SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDRDAILSYQANHKEAQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVHQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI-GNAV 604
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + + GN V
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAQAVFDFLRGNNV 351
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSAHPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNTLDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|440755562|ref|ZP_20934764.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440175768|gb|ELP55137.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 420
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSVGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVGEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVPMAKYP------------LTKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSAQPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQNKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECS------VI 166
P TP K +DLF G GG G+ + ++E AA+Y NF E S
Sbjct: 6 PKHTPAKAVDLFCGAGGFSLAARNLGI-EVVAALENNHYAAATYRHNFIEGSRRPPLLFE 64
Query: 167 QDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLV 226
D + ++ ++ G VD+I+ GPPCQGFS +R + +N L+
Sbjct: 65 GDILAISPEAFMQAANLTPG-------GVDIIMGGPPCQGFST-HRIKGAGIDDPRNTLL 116
Query: 227 FTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT-FDVLQSGNYGVA 285
+ + +P+Y ++ENV GL+ E LQ + + Y V+ VL + +YGV
Sbjct: 117 LRYFEYVQAIRPRYFLVENVPGLLWPRHEEYLQRFYKLATEAGYHVSPPQVLNARDYGVP 176
Query: 286 QSRNRVVILASKPGYKLPSF-PQPLH 310
Q+R RV IL + G+ LP + P+P H
Sbjct: 177 QNRKRVFILGTAGGHTLPDWPPRPTH 202
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 511 NNNWQGVLGRLAWDESFDTIVTT-PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF 569
+N + V GR+ D T+ T NP +G+ LHP Q +TVR AR Q FP+++ F
Sbjct: 272 HNGHKDVYGRINPDAPGPTMTTACTNP--SKGRFLHPTQHHGITVRHAARFQTFPETFTF 329
Query: 570 RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPPPLAK 610
+GGI Q+GNAVP +G +I+ + +A+P +A+
Sbjct: 330 KGGIMAASAQVGNAVP----IDLGMAVIRPLLSALPACIAR 366
>gi|434393274|ref|YP_007128221.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428265115|gb|AFZ31061.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 427
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG G+ QAG +VE + A +Y NF V+ D + +++
Sbjct: 17 AVDLFAGAGGFSLGIEQAGF-DVLVAVEHDPIHACTYSFNFPLTQVLAADVRKMSGDVIR 75
Query: 180 -----GHTQHKGVSLPQ-KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+ H ++ +DL+ GPPCQGFS + + R L+ + N LVF F
Sbjct: 76 EAATCAYRSHYPQAISSWDGRIDLVFGGPPCQGFSIMGK-RSLDDER--NNLVFHFYRLV 132
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P Y ++ENV G+ + + YQV +L + ++GV Q R R+
Sbjct: 133 TELSPSYFVMENVPGMAIGQYKLWCAQLKTQFEQAGYQVEVQILNAADFGVPQRRRRLFF 192
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
L S+ G S P+P ITV+DAI+DLP V +
Sbjct: 193 LGSQQGVTPVSLPKPYSTL-----------------------ITVKDAIADLPDVEE 226
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP + RV++VRE AR FPD + F ++Q+GNAVPP LA+A
Sbjct: 331 TSPRPI-------HPTRSRVISVREAARLHSFPDWFRFHQTKWHGFRQVGNAVPPLLAQA 383
Query: 592 IGYEIIKCI 600
IG + I +
Sbjct: 384 IGRQAIAAL 392
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ +++R SY AN +E C + Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSIHPYFELIWANDIDRDAILSYQANHKEAQTILCDIAQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSAHPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKHFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQNKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 48/268 (17%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS- 176
+ LDLFSG GG GL AG+ K ++EL+R + ++ NF E Q + S
Sbjct: 2 ITSLDLFSGAGGFTLGLKNAGI-KTIGAIELDRFASETFRKNFPEIPHYQANITEYGDSE 60
Query: 177 ---LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
L KG VD+I GPPCQGFS + + +N L+ F
Sbjct: 61 IIKLFKG--------------VDIITGGPPCQGFS-VAGPSQYGIIDNRNNLIMEMYRFA 105
Query: 234 DLFQPKYIILENVTGLVHFN---KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
+ +P +ILENV G+++ + L + + + Y++ VL + ++GV Q R R
Sbjct: 106 SILKPNLVILENVKGILNGKLSPTKKALDEYMNNMSNIGYKIKVFVLNTSDFGVPQGRQR 165
Query: 291 VVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQ 350
V ++A++ +P I G K + TV +A+ DLP +
Sbjct: 166 VFVIAARNEAFIP-------------LEIIGEYTQGKKAKR-----TVGEALEDLPLIDS 207
Query: 351 G-----ANCYLFHNPPKTHFQRMMKDGS 373
G A Y F KT +Q+ +++GS
Sbjct: 208 GEGVEDAVTYPFE--AKTDYQKWLREGS 233
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 18/79 (22%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVF-------------RGGICD-----MYKQIG 581
Q +HP +R LT RE AR Q FPD ++F R G D Y QIG
Sbjct: 305 QSNFIHPYLNRNLTAREGARLQSFPDKFIFCGPRTLMSKKLLEREGRLDEIGLSQYNQIG 364
Query: 582 NAVPPPLAKAIGYEIIKCI 600
NAVPP LA+AIG ++ +
Sbjct: 365 NAVPPLLAEAIGKTVLDSL 383
>gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
Length = 361
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 62/299 (20%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+GCGG+ G AG +P +VE + A++Y ANF E V D V S +
Sbjct: 2 IDLFAGCGGMTSGFTSAGF-EPVMAVEHDLHAASTYAANFGEDHVRWADIAAVPDSAVP- 59
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
VD++V GPPCQGFS L +R+++ +N L +L +P
Sbjct: 60 -------------RVDVVVGGPPCQGFSTLG-SRDVDDP--RNSLWREYLRVVRAARPSV 103
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
++ENV + + +LQ Y+++ VL + ++GV Q R R +++ S+ G
Sbjct: 104 FVIENVGRFLASTEFALLQA-----ETEGYELSAGVLLAADFGVPQRRRRAIVIGSRVGK 158
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
P P H A ++ HA VRD ++ LP V P
Sbjct: 159 V--ELPAPTH--------------ARESWHA------VRDVLTGLPEV-----------P 185
Query: 361 PKTHFQRMMKDGSRIHDIHINLRELLQD-HICKILSPLMEMRIRLIPSFPNADWRDLPN 418
T R + + R D H+ + +PL +R R +P P DLP+
Sbjct: 186 ASTALPRASAE---FFGRSVPGRFTSTDLHVGRNPTPLSLLRYRHVP--PGGGRFDLPD 239
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQ---------DRVLTVREYARAQGFPDSY 567
V+GR+ WDE TI T K G+ LHP+ DR +T E AR QGFPD +
Sbjct: 256 VMGRMRWDEPSLTIRTEFYKPEK-GQYLHPQWEPGEDGHRVDRPITHLEAARLQGFPDGF 314
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
+ G + +QIGNAVPPPLA+A+ + + P
Sbjct: 315 RWCGTKGGVARQIGNAVPPPLARAVAEHVRGALTGVARP 353
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 29/288 (10%)
Query: 69 ETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSG 126
+T +YY K + NA P+ LAY + K+ K K +DLF G
Sbjct: 158 QTFQDDYYFYGNKKEILNQVGNAVPVFLAYQI----GKKIKDKIGC-----YKSVDLFCG 208
Query: 127 CGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKG 186
GG+ G +AG+ + ++++S + N E +V+ C + + +K +K
Sbjct: 209 AGGMTTGFKKAGIISLLGN-DIDKSACITLKVNNPEINVL---CGDITQQAIK----NKI 260
Query: 187 VSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENV 246
S+ + D+I GPPCQGFS A + +N L F+ +PK I+ ENV
Sbjct: 261 SSIALEQGADIICGGPPCQGFSM---AGFRADNDPRNQLFRDFIDVIKKVKPKIIVFENV 317
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK-LPS- 304
GL+ + K +I + I ++ Y V+ + +GV+Q R RV+I+ ++ +PS
Sbjct: 318 EGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANEFGVSQKRKRVIIICARDDLNIMPSE 377
Query: 305 -FPQPLHAFSNQLFTINGNL----VANKTSHAPYRSITVRDAISDLPR 347
FPQP+ + + T + + + A Y+S + A D R
Sbjct: 378 LFPQPITIEAKKQITAKDTIKDLEIIECSESAKYKSNNINTATIDFLR 425
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 517 VLGRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
+ GR+ +++ TI T N P N G +HP +RV++VRE AR Q F D Y F G +
Sbjct: 115 LYGRIDYNKPSYTITTCFNRPGN--GTYVHPIHNRVISVREAARFQTFQDDYYFYGNKKE 172
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIG 601
+ Q+GNAVP LA IG +I IG
Sbjct: 173 ILNQVGNAVPVFLAYQIGKKIKDKIG 198
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINAY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVF 343
>gi|422620621|ref|ZP_16689298.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica
str. M301072]
gi|330900978|gb|EGH32397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica
str. M301072]
Length = 340
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 42/245 (17%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLL 178
+DLFSGCGGL +GL AG + +VE++ ++ N + ++ +D L ++L+
Sbjct: 7 AIDLFSGCGGLTQGLKDAGY-EVKGAVEIDSKARKTFTMNHADVPLVGEDIRQLSAETLM 65
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKL--KNGLVFTFLSFCDLF 236
+ G+++ E+DL+ PPCQGFS L R++ S +N L+ F
Sbjct: 66 R----ESGLAI---EELDLLAGCPPCQGFSTL-RSKNGRNSLTDNRNNLIDDFARLALAL 117
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+PK I++ENV L F K L + Y V + VL N+GVAQ R R+++ AS
Sbjct: 118 RPKMIMMENVPALSKFEK---FLTFVRQLEEAGYSVLYKVLDVSNFGVAQRRKRLILSAS 174
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
+ G P P A S+TVRD I LP G++
Sbjct: 175 RIGQ--PCLASPSTA-----------------------SLTVRDKIEHLP--GAGSSGDA 207
Query: 357 FHNPP 361
H+ P
Sbjct: 208 LHDLP 212
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 512 NNWQGVLGRLAWDESFDTIVTT-PNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
N + V GR+ WD+ TI + NP +G+ LHP ++R +T+RE A QGFP SY F
Sbjct: 250 NGFNDVYGRMHWDQVAPTITSGCINP--SKGRFLHPNENRPITLREAAILQGFPASYKFD 307
Query: 571 G--GICDMYKQIGNAVPPPL 588
G + IGNA+PPP
Sbjct: 308 ASHGKEAISLMIGNALPPPF 327
>gi|425448877|ref|ZP_18828721.1| Modification methylase XorII [Microcystis aeruginosa PCC 7941]
gi|389767148|emb|CCI07359.1| Modification methylase XorII [Microcystis aeruginosa PCC 7941]
Length = 422
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSVGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVGEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LAKTVDLNSVKKSAFTS--VYDAISDL 212
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGDAVMGAM 374
>gi|425439364|ref|ZP_18819692.1| Modification methylase XorII [Microcystis aeruginosa PCC 9717]
gi|389720440|emb|CCH95875.1| Modification methylase XorII [Microcystis aeruginosa PCC 9717]
Length = 420
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVGEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LAKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 45/304 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN-LVLKSLL 178
+ LF G GG G QAG + ++ + + + +Y NF + +D N L +L
Sbjct: 6 AISLFCGAGGCSLGFKQAGY-EILYANDKDSAAIDTYKRNFPDAVCSNEDINNLDFNKVL 64
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
KG G E+D+++ GPPCQGFS A +N L+ +++ ++ +P
Sbjct: 65 KGIGAAPG-------ELDILIGGPPCQGFST---AGTKFWDDPRNHLLRSYVKALEVVRP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K+ I+ENV GL+ NK + + +++ Y + + + S YGV Q R RV+I+ ++
Sbjct: 115 KWFIMENVEGLLTSNKGKYIHEAAKAFIEIGYFIRIEKVYSQEYGVPQRRKRVLIVGNRL 174
Query: 299 G--YKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYL 356
G YKLP ++G + N IT+ AI LP ++ + +
Sbjct: 175 GHNYKLPE----------ATIRVSGQIFRNS-------DITISHAIDTLPVAAKSKSVSV 217
Query: 357 --FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWR 414
P + F +++ G+ + + DH C ++ + RI + P +
Sbjct: 218 TPITEPVRDKFDLILR-GNAVE---------ITDHYCPLIKGIQLERISALK--PGQTMK 265
Query: 415 DLPN 418
DLP+
Sbjct: 266 DLPD 269
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
+++HP ++R LT+RE AR Q FPD ++F G +QIGNA+PP LA+ I G
Sbjct: 319 ELIHPTENRPLTIREAARIQTFPDDFIFCGTASQKIQQIGNAIPPMLARIFAEHIRDDYG 378
Query: 602 NAVPP-PLAKAIGYEIIK 618
P K +GY + K
Sbjct: 379 FVGKPHNEGKLLGYLLTK 396
>gi|390441940|ref|ZP_10229964.1| Modification methylase XorII [Microcystis sp. T1-4]
gi|389834735|emb|CCI34090.1| Modification methylase XorII [Microcystis sp. T1-4]
Length = 422
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LTKTVDLNPAKKSAFTS--VYDAISDL 212
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGDAVMGAM 374
>gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 384
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ G QAG +P S++ + ++ ANF S+ D + V
Sbjct: 39 IDLFCGAGGMTLGFMQAGF-QPILSIDHDLPSIETHRANFPGMSICTDIRDFV------- 90
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
P D++V GPPCQGFS+L ++ K +L+N L ++ +P
Sbjct: 91 -------DFPS---ADVVVGGPPCQGFSRL--GKQARKERLENFLWKDYMRCVASSKPSV 138
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
++ENV F K+ + K+ Y++T VL + ++GV Q R R +++ S+ G
Sbjct: 139 FVIENVP---EFLKDPAFLGVSEESEKLGYKLTVSVLNAADFGVPQRRQRTIMIGSRIGP 195
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
PS P+ H + L + TVRDAI DLP N + N
Sbjct: 196 --PSLPRATHQKPGDQMNLFTELPTWR---------TVRDAIGDLPLEPTNENLHNSRNV 244
Query: 361 PKTHFQR 367
K +R
Sbjct: 245 SKLSLER 251
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVT---TPNPLNKQGKILHPEQDRVLTVREYARAQGFPDS 566
R ++GRL WD TI T P ++G+ LHP DR +TVRE AR Q FPD
Sbjct: 279 RGGGSTDLMGRLEWDAPSLTIRTQFLKP----EKGRYLHPAADRSITVREGARLQTFPDD 334
Query: 567 YVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+ F G + KQIGNAVP LA+ + E+ +
Sbjct: 335 FKFTGSVFQTVKQIGNAVPVELARQVALEVFQ 366
>gi|452204612|ref|YP_007484741.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
gi|452111668|gb|AGG07399.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
Length = 363
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
PL L +DLF GCGGL GL +AG + +V+ + A+Y +N ++ V + D
Sbjct: 12 PLHDELTAIDLFCGCGGLTVGLKRAGF-RVIGAVDNDPIAVATYRSNHRDVKVWKKDITK 70
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQ---LNRARELEKSKLKNGLVFTF 229
+ +K + + K ++DL+ PPCQGF+ LN ++E+E +N LV F
Sbjct: 71 LRIDAVKRRLKLR------KGDLDLVAGCPPCQGFTSLRTLNGSKEVEDP--RNDLVLEF 122
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
F +PK +++ENV L + + L ++ Y + +L +GNYGV Q R
Sbjct: 123 QRFVKHLRPKAVMMENVPELAEDKRFADFKAY---LKRLGYVGQYRILDAGNYGVPQRRE 179
Query: 290 RVVILAS 296
R++ +AS
Sbjct: 180 RLIYIAS 186
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTP-NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
R + ++ V GR+AWD TI + NP +G+ LHPE+DR +T+RE A QG P Y
Sbjct: 259 RCSGFKDVYGRMAWDRQAPTITSGCFNP--SKGRFLHPEEDRAITMREAALLQGLPRKYK 316
Query: 569 FRG--GICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
FRG + IGN +PPP A I K + N + P
Sbjct: 317 FRGTKSKSTIALMIGNVLPPPFTAAHARMIRKVLINNMLP 356
>gi|399088671|ref|ZP_10753609.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398030459|gb|EJL23871.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 498
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 39/261 (14%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ---------ECSVIQDD 169
+ LDLFSG GG+ G +AG + ++E++ A ++ NF + +D
Sbjct: 28 RVLDLFSGAGGISLGFQKAGF-RIDGALEIDPQAALTHALNFHGHLDTDLLAAHAAPRDM 86
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELE--------KSKL 221
+ + L++ Q + SL ++ VD++V GPPCQ ++++ RA+ E K
Sbjct: 87 TKVEPRDLVE---QLQLGSL--ENSVDVLVGGPPCQAYARVGRAKLREVADHPQAFKVDP 141
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGN 281
+ L +L++ F+P +++ENV ++H+ + + + I L + Y + ++ +
Sbjct: 142 RGNLYLRYLTYVRAFRPLALLIENVPDILHYAHHNVAEEIVEALEALGYVANYSLINAAF 201
Query: 282 YGVAQSRNRVVILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVA----NKTSHAPYRS- 335
+GV Q R+RV I+A + LP FP+ H F + VA N+ A Y +
Sbjct: 202 HGVPQMRDRVFIVAYRKELGLPIRFPKATHHFDLPVGYAGTRAVALRYVNREGSAGYVAP 261
Query: 336 ----------ITVRDAISDLP 346
+T DA+SDLP
Sbjct: 262 DLGDESLPFPVTATDALSDLP 282
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG---YEIIKCIGNA 603
+Q R ++VRE AR Q FPD + F G + +KQIGNAVPP +A A+ +E +K
Sbjct: 427 DQARTISVREAARLQSFPDGFKFSGTMNPAFKQIGNAVPPLMAYALATVIHEDLKAAAGT 486
Query: 604 VPPPLAK 610
P +A+
Sbjct: 487 AAPTMAR 493
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNL 172
+K +DLFSG GGL Q G+ ++EL+ + + +Y AN E +I D N
Sbjct: 1 MKAIDLFSGAGGLSLAAHQCGI-DVIAAIELDTAASITYRANLIEQLKAPTKLINGDINE 59
Query: 173 V-LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
V L +L+K G E++L++ GPPCQGFS +R +N L+ +
Sbjct: 60 VDLPALMKELKLKSG-------ELELLLGGPPCQGFST-HRINNAGIDDPRNQLLLKYFD 111
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYGVAQSRNR 290
F D QPK ++ENV GL+ L + Y + F +L + +YGV Q+R R
Sbjct: 112 FVDGLQPKAFLIENVAGLLWKRHENYLNQLLALAETHGYTIHFCGILNAKDYGVPQNRKR 171
Query: 291 VVILASKPGYKL--PSFP 306
V I ++ K+ P+FP
Sbjct: 172 VFIFGTRNDLKINNPAFP 189
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 511 NNNWQG---VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSY 567
+N ++G V GR+ +TI T N +K G+ +HP ++ +T+R AR Q FPDS+
Sbjct: 292 SNGYKGHKDVYGRIMIHLPGNTITTGCNNPSK-GRFVHPWKNHGMTLRHAARFQTFPDSF 350
Query: 568 VFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
F G KQIGNAVP L K + I + I
Sbjct: 351 NFIGTSTQQGKQIGNAVPVELGKVLINTIKRII 383
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|424782768|ref|ZP_18209614.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
gi|421959589|gb|EKU11198.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
Length = 393
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 86 QPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWS 145
QP++ +EL +IL E +P FP + P K +DLF+G GG G Q G +S
Sbjct: 53 QPSS--IELKHILSF---PEKVP-FPNNENAPYKIIDLFAGIGGTRLGFYQTGKTNVVFS 106
Query: 146 VELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQ 205
E+++ +Y ANF E D + + + H D+IV G PCQ
Sbjct: 107 SEIDKFAVKTYKANFGETPF--GDITKISEKDIPNH--------------DIIVGGFPCQ 150
Query: 206 GFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCL 265
FSQ + E + + L F +PK +LENV L +K + I L
Sbjct: 151 AFSQAGKKLGFEDT--RGTLFFEIARIIKEKRPKAFLLENVKNLKSHDKGRTYKTIEKTL 208
Query: 266 LKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP----GYKLPSFPQP 308
+NY V +L++ ++GV Q+R R+ I+ YK SFP P
Sbjct: 209 KDLNYDVHSIILKAKDFGVPQNRERIYIVGFDKDKIDNYKDFSFPIP 255
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R LT RE AR QGFP++Y+ YKQ GN+V + AI II +
Sbjct: 334 RKLTPREAARLQGFPENYIIPVSDTQSYKQFGNSVAVTVIHAIANNIIDIL 384
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGV-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|425434820|ref|ZP_18815284.1| Modification methylase XorII [Microcystis aeruginosa PCC 9432]
gi|389675608|emb|CCH95291.1| Modification methylase XorII [Microcystis aeruginosa PCC 9432]
Length = 426
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVPMAKYP------------LTKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Moorea producens 3L]
gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 40/243 (16%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG G+ QAG +VE + A Y N + V+ D + ++
Sbjct: 10 AVDLFAGAGGFSLGIEQAGF-DVALAVEQDPIHGAVYAFNSPQTKVLCTDIATLSGQEIQ 68
Query: 180 GHTQHKGVSLPQKHE--------------VDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
+ G Q +DL++ GPPCQGFS + + R+++ ++N L
Sbjct: 69 KALREWGTEREQNQHCTEVSSQVSTIDLVIDLVIGGPPCQGFSLIGK-RQVDD--VRNNL 125
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYG 283
VF F QP+Y ++ENV GL + + + Y +T VL + ++G
Sbjct: 126 VFEFCRLVKELQPRYFVMENVPGLAQNKYQHLFEQLISEFKAAGYTITEPVQVLNAADFG 185
Query: 284 VAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAIS 343
V Q R R+ +L S+ G ++P S++L +SH + +TV+DAI+
Sbjct: 186 VPQKRRRLFLLGSRLGEAPVAYP------SSEL-----------SSH---QWVTVKDAIA 225
Query: 344 DLP 346
DLP
Sbjct: 226 DLP 228
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 24/111 (21%)
Query: 501 PWSLVHTASRNNNWQGVLGRLAWDESFDTI----------VTTPNPLNKQGKILHPEQDR 550
P V T SR L RL WD+ T+ T+P P+ HP+ R
Sbjct: 304 PMGEVETTSR-------LRRLHWDKPCHTLRAGTGYKNGRYTSPRPI-------HPDYPR 349
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
V++VRE AR FPD + F G ++Q+GNAVPP L + +G +I+ +
Sbjct: 350 VISVREAARLHSFPDWFRFHGTKWHGFRQVGNAVPPRLGRVLGKQIMTALA 400
>gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 414
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 137 AGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLLKGHTQHKGVSLPQKHEV 195
AG + P SVE++ + N + +VIQ+D N ++ +K K
Sbjct: 26 AGFSVPL-SVEIDTWACDTLRYNRPDSTVIQNDIGNFSTENDVKNICNFKP--------- 75
Query: 196 DLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKN 255
D+I+ GPPCQGFS A++ K +NGL F + +PK ++ENV GL+
Sbjct: 76 DIIIGGPPCQGFSIAGPAQKDPKDP-RNGLFINFAQWIKFLEPKAFVMENVKGLLSRKNA 134
Query: 256 E---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF 312
E ++ I ++ Y V VL + YG+ Q R R+ I+ +K G K+ P+ H+
Sbjct: 135 EGFKVIDIIKKTFEELGYFVEVWVLNAAEYGIPQIRERIFIVGNKKG-KVLGIPKKTHSL 193
Query: 313 SNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCYLFHNPPKTHFQRMMK 370
Q +N + ++ + ++T+ DAISDLP ++ +G+ +H P+ +Q +
Sbjct: 194 --QFLNLNRSQLSIFDDMSIIPALTLWDAISDLPELNAREGSEEQPYHLKPQNTYQTWAR 251
Query: 371 DGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADW 413
+GS L +H+ ME RL+ F + W
Sbjct: 252 NGS----------ATLYNHVA------MEHSDRLVERFRHIKW 278
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 20/77 (25%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGG-------------------ICDMYKQIG 581
+HP Q R LT RE AR Q FPD+Y F G +C Y QIG
Sbjct: 327 ANFVHPFQHRNLTAREGARIQSFPDNYRFFGKKTVVSHKLLHREERFDEKFLC-QYNQIG 385
Query: 582 NAVPPPLAKAIGYEIIK 598
NAVPP LAK I + +++
Sbjct: 386 NAVPPLLAKVIAHHLLE 402
>gi|444414357|ref|ZP_21210635.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0199]
gi|444282396|gb|ELU87660.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0199]
Length = 438
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD--------DCN 171
+DLF G GG EGL Q+G +S ++ +Y ++ +IQ D
Sbjct: 4 AIDLFCGAGGCSEGLIQSGF-HILFSSDISEMVEKTYVNRHEQLGLIQGKNTWFERRDIR 62
Query: 172 LVLKSLLKGHTQH----KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
+ S +K H K +P E+DLI+ GP CQGFS RA +KS +N L
Sbjct: 63 ELTGSDIKKHISELEIFKNKEIP---EIDLIMGGPSCQGFS---RAGRRDKSDPRNMLFG 116
Query: 228 TFLSFCDLFQPKYIILENVTGL-------------VHFNKNEILQCIFHCLL-KMNYQ-V 272
++ + PKYIILENV G + + + I L ++ Y+ +
Sbjct: 117 EYVRVVNEIHPKYIILENVEGFMDMQFLGYKGITGIEYPDGSVTPDILKSELNEIGYETL 176
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN--QLFTINGNLVANK 327
+L + +YGV Q RNRV+ + K G K P +P P H N L G+L+ +K
Sbjct: 177 EPRILNAADYGVPQRRNRVIFIGYKKGLKQPQYPAPTHGPENYISLEEAIGDLIIDK 233
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVF-----RGGI- 573
R A D+ TIVT + + P ++R TVRE AR Q F DS+ F GG+
Sbjct: 354 RWAPDQPSATIVTIAD------DYISPWENRTFTVREMARCQSFDDSFEFLGKRTTGGLK 407
Query: 574 ----CDMYKQIGNAVPPPLAKAIGYEIIKCI 600
Y Q+GNAVPP LAKA+ EI+K +
Sbjct: 408 RRVEVPQYTQVGNAVPPLLAKALADEILKVL 438
>gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286]
gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286]
Length = 452
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 66/288 (22%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF G GGL +GL AG + W ++ E + +Y+AN DC + + +
Sbjct: 6 LTAIDLFCGAGGLSQGLHDAGF-ETLWGIDHEENTKPTYEANH--------DCEMTVGDI 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR------ELEKSKLKNGLVFTFLS 231
+ G+ ++ E+DL+ GPPC FS + R++ +S ++ L FL
Sbjct: 57 REEEPPDLGL---EEGELDLVAGGPPCPTFSLVGRSKINSIEGRDNQSDDRHLLYEDFLR 113
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCL--------------LKMNYQVTFDVL 277
F D +QPK ++ENV G++ +NE + + + L +NY V +L
Sbjct: 114 FVDHYQPKAFLMENVEGMLS-AENEDGKPVVDTIKEQMRGEREVADLDLDLNYSVRVQLL 172
Query: 278 QSGNYGVAQSRNRVVILASKPGYKLPSFPQ------------------------------ 307
S +YG+ Q R R+ + ++ G + P +
Sbjct: 173 DSADYGIPQHRKRLFFIGNRIGEENPDMTEWETHRKPKNEEEKKIKYKEDPSERSEEDQS 232
Query: 308 PLHAFSNQLFTIN-GNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
LH F ++ T N+ S P+ TV D I DLP VS +
Sbjct: 233 TLHGFVDEDGTEEFPAFRKNRQSKEPWN--TVADGILDLPPVSPSGDT 278
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 537 LNKQGKI-LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYE 595
L K G + +HP + R +TVRE AR Q F D++ F +KQ+GNAVPP LA+A+
Sbjct: 374 LYKDGHMFIHPNEARSITVREAARLQSFKDTFEFPVSRTHAFKQVGNAVPPLLAQALATA 433
Query: 596 I 596
I
Sbjct: 434 I 434
>gi|365154735|ref|ZP_09351161.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
gi|363648972|gb|EHL88107.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
Length = 393
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 86 QPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWS 145
QP++ +EL +IL E +P FP + P K +DLF+G GG G Q G +S
Sbjct: 53 QPSS--IELKHILSF---PEKVP-FPNNENAPYKIIDLFAGIGGTRLGFYQTGKTNVVFS 106
Query: 146 VELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQ 205
E+++ +Y ANF E D + + + H D+IV G PCQ
Sbjct: 107 SEIDKFAVKTYKANFGETPF--GDITKISEKDIPNH--------------DIIVGGFPCQ 150
Query: 206 GFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCL 265
FSQ + E + + L F +PK +LENV L +K + I L
Sbjct: 151 AFSQAGKKLGFEDT--RGTLFFEIARIIKEKRPKAFLLENVKNLKSHDKGRTYKTIEKTL 208
Query: 266 LKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP----GYKLPSFPQP 308
+NY V +L++ ++GV Q+R R+ I+ YK SFP P
Sbjct: 209 KDLNYDVHSIILKAKDFGVPQNRERIYIVGFDKDKIDNYKDFSFPIP 255
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R LT RE AR QGFP++Y+ YKQ GN+V + AI II +
Sbjct: 334 RKLTPREAARLQGFPENYIIPVSDTQSYKQFGNSVAVTVIHAIANNIIDIL 384
>gi|442321299|ref|YP_007361320.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488941|gb|AGC45636.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 559
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 68/315 (21%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECS------------- 164
L+ +D+FSGCGG+ G AG P SVE + A S+ ANF +
Sbjct: 62 LRYMDMFSGCGGISLGFLTAGFT-PVASVENDPWAAKSHGANFGPRTQGGDRPAHHIPRD 120
Query: 165 VIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSK---- 220
+D V L G++ + ++D++V GPPCQ F+++ RA+ E++
Sbjct: 121 ATTEDAVSVFADL--------GLTGTPEDQIDVLVGGPPCQAFARVGRAKLREQAHRRQE 172
Query: 221 -------LKNGLVF---TFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY 270
L +G V ++ F +P +++ENV +++ + + + + L++ Y
Sbjct: 173 ATADQAFLVDGRVSLWQRYVHFIRATKPVALLMENVPDILNHGGSNVAELVSKSLVEEGY 232
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILA-SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTS 329
V + +L + YGV Q+R R++++ + +P FP P H + A +
Sbjct: 233 SVAYTLLNAAWYGVPQTRERMILIGFHRATGIMPRFPSPTHHVDLPSGYTSSKNTARRVI 292
Query: 330 HA-----------PYRSI----TVRDAISDLP-----------RVSQGAN-----CYLFH 358
H P RS+ T A++DLP ++ +GA
Sbjct: 293 HEEGSEYHRWMADPTRSLSPATTASQALTDLPPLFALDLLKAGQLRRGAKDPSEPVDYIS 352
Query: 359 NPPKTHFQRMMKDGS 373
N P T + R+M++ S
Sbjct: 353 NKPSTPYSRLMREWS 367
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNAVPP 606
EQ R +TVRE AR Q FPD +VF+G + ++QIGNAVPP A AI + + + P
Sbjct: 479 EQARTITVREAARLQSFPDGFVFKGSMNPAFRQIGNAVPPLFAYAIAMGMRESLRA---P 535
Query: 607 PLA 609
P+A
Sbjct: 536 PVA 538
>gi|166364460|ref|YP_001656733.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166086833|dbj|BAG01541.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 420
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIL 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LAKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R LTVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCLTVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|420466783|ref|ZP_14965540.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393085181|gb|EJB85869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 351
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKEAQTILCDIVQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI-GNAV 604
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + + + GN V
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVFDFLRGNNV 351
>gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
Length = 431
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 34/240 (14%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
L FSGCGG+ EG AG + + +E+ A++D NF + +D + ++ +K
Sbjct: 93 VLTAFSGCGGMAEGFRMAGFSVEGY-IEVVPEARATFDRNFPGARCLGEDIRAIDEARVK 151
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
L + ++D++ GPPCQGFS R +++ +N L L +L +PK
Sbjct: 152 --------DLLAQVDIDVLAGGPPCQGFSLAGR---RDRADPRNHLFRNLLELAELVKPK 200
Query: 240 YIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+++ENV L+ + ++ I + Y + + + + +YGV Q R RV I+A+
Sbjct: 201 VLVMENVRLLLSMKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVAT 260
Query: 297 K--PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
+ G FP H +NG AP R T RDA DL + G C
Sbjct: 261 RRDSGIGPLRFPPKTHG-------VNGV--------APLR--TFRDATVDLAPLESGQAC 303
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WDE T+ TT ++ + +HP+ R LTVRE AR Q FPD YVF G +
Sbjct: 351 RLRWDEPASTVGTTFGMISAS-RNVHPKHTRSLTVREAARLQTFPDDYVFEGKWGAVRTM 409
Query: 580 IGNAVPPPLAKAIGYEIIKCIG 601
IGNAVPP LA A+ EI K +G
Sbjct: 410 IGNAVPPQLASALAGEIKKALG 431
>gi|422854885|ref|ZP_16901549.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
Length = 358
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLFSG GG GL ++G+ ++E++ +Y N E VI D LV +K
Sbjct: 6 AIDLFSGAGGTTSGLKKSGINVQV-AIEIDPVAVKTYKLNNPEVYVIDRDIKLVSGDEIK 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
H + + +V ++VA PPCQGFS + E ++ +N LVF FL + P
Sbjct: 65 QH-----LKIGSDDKV-MLVACPPCQGFSTIGTNNENDE---RNQLVFQFLRLINELNPD 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
++++ENV G++ I + F + Y V +D++ + +YGV Q R R+V
Sbjct: 116 FLLMENVVGMIRAKNKNIFKS-FLTSINNAYSVNYDIVNTADYGVPQLRKRLV------- 167
Query: 300 YKLPSFPQPLHAFSNQLF---TINGNLVANKTSHAPYRSI---TVRDAISDLPRVSQG 351
LH +L T+ NL S+ P ++ D I DLP ++ G
Sbjct: 168 ---------LHGIKKELLDQTTLTLNLPPKTHSNIPELNLLPWVNADVIMDLPPINGG 216
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIG 593
+G+ HP Q+R L+ RE AR Q F D Y+F G + KQIGNAVP LA+A G
Sbjct: 293 KGRFGHPTQNRALSAREAARLQSFDDDYIFVGNRGQLAKQIGNAVPVKLAQASG 346
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
Length = 350
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 42/239 (17%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGVA-KPCWSVELERSEAASYDANFQECSVIQDDCNL 172
+ ++ LDLF+G GGL G QA + +P +VE++ + A +Y +F C V
Sbjct: 1 MSAAIRTLDLFAGAGGLSLGFEQADLGFEPVHAVEIDAAAARTYKRHFG-CPVYDGPIE- 58
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
L + + D+I+ GPPCQGFS L R R+ E N L +L
Sbjct: 59 ---------------DLERFEDADVILGGPPCQGFSPLGRDRDDESRAQLNELWQHYLRA 103
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCL-----LKMNYQVTFDVLQSGNYGVAQS 287
+PK ++ENV F ++ + + LK Y+ + VL + +YGV Q
Sbjct: 104 VRQVKPKAFVIENVP---EFQRSAQFARLLELMETDRELK-KYRFAYGVLNAADYGVPQR 159
Query: 288 RNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
R R + +A + K+P P P H + S Y +TV DAI D+P
Sbjct: 160 RRRGIFMAVRGRKKVPWPPAPTHG-------------PDSVSATEY--VTVHDAIGDIP 203
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 490 FDMTGQKNTIIP--WSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPE 547
FD+ + ++P W+ T + + V+GRL WD TI T K G+ LHP
Sbjct: 244 FDLARNRPDLLPKCWANKPTGTTD-----VMGRLWWDRPSVTIRTEFYKPEK-GRYLHPV 297
Query: 548 QDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
DR +T RE AR Q FPD + F G + +QIGNAVPP LA+A+ +
Sbjct: 298 ADRPITHREAARLQSFPDDFEFEGTKIQIARQIGNAVPPGLAQALARHL 346
>gi|409197559|ref|ZP_11226222.1| DNA-cytosine methyltransferase [Marinilabilia salmonicolor JCM
21150]
Length = 416
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 66/311 (21%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSE------AASY-----DANFQE-CSV 165
+ +DLFSG GGL EG +AG KP VE++++ A+Y NF
Sbjct: 1 MNFIDLFSGAGGLSEGFIRAGF-KPVAHVEIDKAACNTMITRAAYHYLKRTGNFNSYLDY 59
Query: 166 IQDDCNLV-LKSLLKGHTQHKGV-----------------SLPQKHEVDLIVAGPPCQGF 207
IQ+ L SL+ + + SL +D I+ GPPCQ +
Sbjct: 60 IQNKITRTELYSLIPNKERESVINLSIGDENNEIIFDKIDSLKGDKSIDFIIGGPPCQAY 119
Query: 208 SQLNRARELEKSK--LKNGLVFTFLSFCDLFQPKYIILENVTGLVHF---NKNEILQCIF 262
S + R+R+ + + +N L + F + +QP+Y + ENV GL N + L+ +
Sbjct: 120 SIVGRSRDGNRMQGDSRNYLFREYAKFLEYYQPRYFVFENVIGLKSAKTKNGDSYLEMMR 179
Query: 263 HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGN 322
L+ Y + +L++ ++GV Q+R R++++ K G K +P+ S
Sbjct: 180 ELFLEKGYYTEYKILEAKDFGVLQNRKRIILIGKKNG-KEGFYPKFEKVQS--------- 229
Query: 323 LVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHI-N 381
+TV + DLP + GA Y KT+++ +G+ + + HI N
Sbjct: 230 ------------GVTVSEIFKDLPSLRAGAGEYY-----KTNYKPY--NGTYLFESHIRN 270
Query: 382 LRELLQDHICK 392
+ HI +
Sbjct: 271 GLDFTTQHISR 281
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 544 LHPE--QDRVLTVREYARAQGFPDSYVFRG-----GICDMYKQIGNAVPPPLAKAIG 593
+HP+ Q+R LT RE AR Q FPD + F G YKQIGNAVPP +A+ I
Sbjct: 352 IHPDKSQNRSLTPREAARLQTFPDDFFFEGISEKPSRTAAYKQIGNAVPPLMAEKIA 408
>gi|334139949|ref|YP_004533149.1| DNA (cytosine-5-)-methyltransferase [Novosphingobium sp. PP1Y]
gi|333937973|emb|CCA91331.1| DNA (cytosine-5-)-methyltransferase [Novosphingobium sp. PP1Y]
Length = 445
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +VE++ A ++ NF + +VI + LKG
Sbjct: 7 VDLFAGAGGLSLGFEQAGF-DVAAAVEIDPVHCAVHEFNFPDTAVIPRSV-----AELKG 60
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+ + VD + GPPCQGFS + R L+ + N LV F+ K
Sbjct: 61 SDIRLAAGIGTR-PVDCVFGGPPCQGFSMIGH-RVLDDPR--NRLVLDFVRIVSELDAKT 116
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKP 298
+ ENV GL + L + YQV + VL + ++GV Q R R++++ +K
Sbjct: 117 FVFENVKGLTVGKHRQFLAELVEAFDAAGYQVGQPWQVLDAAHFGVPQHRERLILIGAKK 176
Query: 299 GYKLPSFPQP 308
G LP++P+P
Sbjct: 177 GLPLPAYPKP 186
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ H DR +TVRE AR GFPD + +QIGNAV PP+A+A
Sbjct: 318 TSPRPI-------HHRYDRCVTVREMARLHGFPDWFRLHATKWHGARQIGNAVAPPMARA 370
Query: 592 IGYEIIKCIGNA 603
I ++I+ +G A
Sbjct: 371 IASKVIEALGVA 382
>gi|443649974|ref|ZP_21130388.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159030572|emb|CAO88235.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334780|gb|ELS49273.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 426
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LTKTVDLNPAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGYSAGLENLKEFDALIGLDCDKQALITFENNHKNAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + K + L +K E+++I+ PPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV ++ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS- 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
FS + + P +S+ V+DAISDL + ++GA
Sbjct: 174 ------------RFSFDFYLLE-----------PSQSVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKNS 227
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 520 RLAWD---ESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
RL W+ + DT TP+ G H E R +T R AR Q F D+Y+ G I +
Sbjct: 274 RLNWNNISHTIDTRYDTPS----NGTNSHREMHRSITPRGAARIQSFSDNYMSYGNITSV 329
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
KQIGNAVP LA A+G I++ +
Sbjct: 330 CKQIGNAVPLVLALALGQAILETL 353
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN ++ C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKA----NLFKEYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + +Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKHLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|423068782|ref|ZP_17057570.1| hypothetical protein HMPREF9682_00791 [Streptococcus intermedius
F0395]
gi|355366082|gb|EHG13801.1| hypothetical protein HMPREF9682_00791 [Streptococcus intermedius
F0395]
Length = 427
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSV-ELERSEAASYDANFQECSVIQDDCNLVLKS 176
+K LDLF+G GG G+ AG C E+++ ASY A I+
Sbjct: 1 MKFLDLFAGIGGFRLGMESAG--HECVGFCEIDKFARASYKAIHDTRGEIE--------- 49
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
L T S+ + VD+I G PCQ FS R E ++ L F F +
Sbjct: 50 -LHDITAVSDESIRRIGRVDIICGGFPCQAFSIAGNRRGFEDTR--GTLFFEIARFASIL 106
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+PKY+ LENV GL++ N+ + + I L ++ Y V + VL S N+GV Q+R RV I+
Sbjct: 107 RPKYLFLENVKGLLNHNRGDTFETIIRTLDELGYDVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|18202059|sp|O52702.1|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName:
Full=Cytosine-specific methyltransferase ApaLI
gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus]
Length = 429
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 31/280 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN-LVLKSLL 178
+ LF+G GG G QAG+ KP + E+ +Y N + C+ L L ++
Sbjct: 7 VVSLFAGAGGFSSGFSQAGL-KPLFGAEINADACQTYQEN------VGSPCHQLDLSTVD 59
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
H + L +++ GPPCQGFS A + +N L+F +L+ + P
Sbjct: 60 PSHIEM----LTGGKRPFVVIGGPPCQGFST---AGPRNFADPRNLLIFNYLNIVERLSP 112
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+++I ENV GL+ L + + M Y V + YGV Q+R RV+I+ ++
Sbjct: 113 RWLIFENVEGLLTSGGGRDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIGNRL 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G FP+ L++F + A K S P + ++ +A++ L + + + +
Sbjct: 173 GIDF-QFPEELYSFDSG--------KAKKASGKPL-APSLAEAVAGLGPAASDKDALVPY 222
Query: 359 --NPPKTHFQRMMKDGSRI----HDIHINLRELLQDHICK 392
+ P F M+ G+R+ H + + E +Q + K
Sbjct: 223 ASSEPVNAFDARMRAGNRVEVVTHHVRVEAAERMQVELLK 262
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
+ +HP + R LT+RE AR Q FPD Y + G + +QIGNAVPP A+ +
Sbjct: 322 EFIHPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQIGNAVPPLAAERL 372
>gi|420489566|ref|ZP_14988158.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523507|ref|ZP_15021925.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
gi|393104987|gb|EJC05538.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125856|gb|EJC26308.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
Length = 317
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K LFSG GGL G Q G + W+ + ++ +Y AN + V+ D
Sbjct: 1 MKVASLFSGIGGLDLGFIQNGF-EIIWANDFDKHAVETYKANIGQNIVLGD--------- 50
Query: 178 LKGHTQHKGVSLPQKH--EVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
+ + + H E D+++ G PCQ FS L + E + L FT
Sbjct: 51 ---------IEIEKDHIFEHDILIGGFPCQPFSTLGSLQGFEDKR--GTLFFTICEIIKK 99
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+PK ++LENV L++ NK E + I L +++YQV +D+L + ++G+ Q RNRV I+A
Sbjct: 100 HRPKIVVLENVKNLINHNKGESFKRILFELNELDYQVNYDILNTLDFGIPQQRNRVFIVA 159
>gi|428301953|ref|YP_007140259.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428238497|gb|AFZ04287.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 488
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF----QECSVIQDDCNLVL- 174
+DLF+G GG G+ QAG +VE + A+++ NF CS I D ++
Sbjct: 71 AIDLFAGAGGFSLGMEQAGFDI-LVAVEYDPIHASTHAFNFPLTETLCSDIADVTGKMIL 129
Query: 175 ----KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
KS K H ++DL+ GPPCQGFS + + R+LE ++N L+F F
Sbjct: 130 QAADKSWRKYHQHDSKACQKWNKKIDLVFGGPPCQGFSLMGK-RDLED--IRNNLIFHFC 186
Query: 231 SFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
+PKY ++ENV G+ + L + + Y V VL + ++ V Q R R
Sbjct: 187 RLVLELRPKYFVMENVPGITTGKYKKTLLQLENAFENAGYNVRQTVLNAADFSVPQKRQR 246
Query: 291 VVILASK--PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV 348
+ ++ S G+ +P FP +P ++ TVRDAISDLP +
Sbjct: 247 LFLVGSSNPQGFDIP-FP---------------------IKASPLQT-TVRDAISDLPDI 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP RV+TVRE AR FPD + F ++Q+GNAVPP LA+
Sbjct: 393 TSPRPI-------HPTFPRVITVREAARLHSFPDWFRFHQTKWHGFRQVGNAVPPLLART 445
Query: 592 IGYEIIKCI 600
IG II +
Sbjct: 446 IGERIITAL 454
>gi|359425654|ref|ZP_09216750.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
gi|358239145|dbj|GAB06332.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
Length = 395
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAK--PCWSVELERSEAASYDANFQ-ECSVIQDDCNLVL 174
++ LDLF+G GGL EGL ++ +VE E + AA+Y N + S + +
Sbjct: 24 IRTLDLFAGAGGLSEGLNTTAGSRFETVRAVEWEPAAAATYTVNHGGQLSGRKVEGGPAY 83
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
++ V +VD+++ GPPCQGFS LNRA +N L + +
Sbjct: 84 AGAIESWLAEDKVP-----DVDVVIGGPPCQGFSTLNRA---GVGAHRNELWRLYAQTVE 135
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
PKY +LENV + ++ + Q + +Y + D+L + +YG Q+R RV+++
Sbjct: 136 KATPKYFVLENVPAFLKSDQWIVFQTELQEGMLKDYSIDVDILNAADYGAVQARKRVIVI 195
Query: 295 ASKPGYKLPSFPQPLHA 311
P P H+
Sbjct: 196 GHHKDLPAPGLPNATHS 212
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM 576
V+GRL W++ TI T K G+ +HPE+DRV+T E A QGFP+ Y + G ++
Sbjct: 301 VMGRLTWEKPSVTIRTEFFKPEK-GRYIHPEEDRVITHYEAALIQGFPEDYCWVGTREEI 359
Query: 577 YKQIGNAVPPPLAKAIGYEIIKCI 600
+QIGNAVP PL AIG +I
Sbjct: 360 ARQIGNAVPIPLGAAIGRSLIDAF 383
>gi|425469096|ref|ZP_18848060.1| Modification methylase XorII [Microcystis aeruginosa PCC 9701]
gi|389883697|emb|CCI35949.1| Modification methylase XorII [Microcystis aeruginosa PCC 9701]
Length = 426
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVGEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYAINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVTMAKYP------------LAKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL + ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAIGVCGDITQI----- 58
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ K + L Q E+++I+ GPPCQGFS N+ + L +N L ++ +
Sbjct: 59 --EIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDSRNFLFLEYIEIVKALKL 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ + +++ V+DAISDL + ++GA
Sbjct: 175 ------------------FSFDFNLLESS------QNVNVQDAISDLAYLCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
+ NP ++ +Q +M+ S
Sbjct: 211 YLNPIQSSYQALMRKDS 227
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ G HPE R +T RE AR Q F D+Y+F
Sbjct: 268 FKSTWGRLNWNKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDNYIFY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I+K +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILKSL 353
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT 182
FSGCGGL G +AG S + E + A +Y NF + +++D + ++
Sbjct: 31 FFSGCGGLDLGFERAGFDVALGSDQWEPA-AETYRRNFPDVEFVEEDVRELDAPAIRESV 89
Query: 183 QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR----ELEKSKLKNGLVFTFLSFCDLFQP 238
+ G +D+++ GPPCQGFS+LN + E+EK + +N L FL + +P
Sbjct: 90 ERAGYD---PGGIDVVIGGPPCQGFSRLNNEQIELDEMEKDR-RNTLFEEFLRVVSVLEP 145
Query: 239 KYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+ +++ENV L++ ++ + I Y+ + VL++ YGV Q R R+ +
Sbjct: 146 QLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMG 205
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAP 332
+ + FP+P + + G +A+ T P
Sbjct: 206 TDRDVPI-RFPEPTTPEGS--WRTAGEALADATDDLP 239
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+HP +DR LT RE AR Q FPD + F G D+ KQIGNAVP L + + ++I
Sbjct: 316 FIHPSEDRYLTPREMARLQTFPDEFAFEGTKTDVMKQIGNAVPVRLGEELAHQI 369
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 35/257 (13%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL ++ ++ +++ N + + D +
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALKAWENNHKHAIGVCGD-------IT 56
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
+ + + L QK E+++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 57 QTENDSRVIKLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRALKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I L + YQ+++ +L + +YGV Q+R R I+ +
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA-- 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F+ + NL+ P +S+ V+DAI DL ++GA
Sbjct: 173 ----------------SRFSFDFNLL------EPSQSVNVQDAIRDLAYFCSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGS 373
NP ++ +Q +M+ S
Sbjct: 211 KVNPIQSSYQALMRKDS 227
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL W++ + DT TP+ +G HPE R +T RE AR Q F D+ +
Sbjct: 268 FKSTWGRLNWNKIGPTIDTRFDTPS----KGTNSHPEFHRSITPREAARIQSFSDNNISY 323
Query: 571 GGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G + KQIGNAVPP LA A+G I++ +
Sbjct: 324 GNKTSVCKQIGNAVPPLLALALGKAILRSL 353
>gi|383480314|ref|YP_005389208.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|383494296|ref|YP_005411972.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
gi|378928304|gb|AFC66510.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|378930023|gb|AFC68440.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
Length = 395
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 52/318 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQD--------- 168
+ +DLF+G GGL GL AG+ K ++VE + A+ N E D
Sbjct: 1 MNYIDLFAGSGGLSLGLHNAGL-KGLFAVEKNKDAFATLKYNLTEKKRHFDWPEWLEMKN 59
Query: 169 -DCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D N +L ++HK + K +VDL+V GPPCQGFS A + E + ++N L+
Sbjct: 60 WDINELL-------SEHKNELVQLKGKVDLVVGGPPCQGFSI---AGKRENNDIRNQLMH 109
Query: 228 TFLSFCDLFQPKYIILENVTGL-VHFNKN----EILQCIFHCLLKMNYQVTFDVLQSGNY 282
+++ L P+ + ENV G + F +N + L K+ Y++ ++ +
Sbjct: 110 SYIELVKLVDPQMLFFENVQGFTIDFRENGKRKNYSAILAEDLKKLGYKINSQIVTMSEF 169
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAI 342
G+ Q+R R ++ ASK + F + L+ + F N NL + +T+ AI
Sbjct: 170 GIPQNRKRFILFASKNREESQLFFERLYT-NIDAFLDNRNLAS---------KVTISAAI 219
Query: 343 SDLPRVS---QGANCYLFHN----PPKTHFQRMMK----DGSRIHDIHINLRELLQDHIC 391
DL R + + FHN ++ +QR+M+ +++ D H D
Sbjct: 220 GDLIRSKGFVESPDTKNFHNGLYGDAESAYQRLMRQNIPSNNKVPDSHRFANH--SDATI 277
Query: 392 KILSPLMEMR---IRLIP 406
K+ LM++ IR+ P
Sbjct: 278 KLFKELMKVSDKAIRITP 295
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 521 LAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD----- 575
L D +TI + P+ +H + R++TVRE+AR Q FPD Y F+G
Sbjct: 311 LKADSICNTITSIPD------DYVHYAEPRIMTVREHARIQSFPDDYEFKGPYTTGGARR 364
Query: 576 -----MYKQIGNAVPPPLAKAIG 593
Y Q+ NA+PP A+ +G
Sbjct: 365 KIDVPRYTQVANAIPPLFAEQVG 387
>gi|359404662|ref|ZP_09197489.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM
18206]
gi|357560090|gb|EHJ41497.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM
18206]
Length = 389
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK-SL 177
K +DLF+GCGGL GL QAG P + E+ +Y N + DD V +
Sbjct: 19 KFVDLFAGCGGLSLGLQQAGFT-PWFVNEIVEQFCNTYKFNHD----LSDDHYFVGDIAE 73
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
L H + L ++ L+ GPPCQGFS NR R L+ +N L +L F +
Sbjct: 74 LNLHLEEYKDMLS---DITLVCGGPPCQGFSMANRQRILDDP--RNALYKQYLIFLKNTR 128
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ I+ENV G++ NK E ++ F L YQ + +L++ +YGV Q+R R +++ ++
Sbjct: 129 PKFFIMENVKGMM--NKIEEIKQNFEEYLGGEYQYDYALLKAQDYGVPQNRERFIMIGNR 186
Query: 298 PG 299
G
Sbjct: 187 VG 188
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 35/57 (61%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
+HP R L+ RE AR Q FPD YV G Y Q+GNAVP LAKAIG I+K I
Sbjct: 332 IHPWDARGLSPREAARIQTFPDDYVITGSQNMWYAQVGNAVPVKLAKAIGDGIMKFI 388
>gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b]
Length = 374
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF G GG+ G QAG +P S++ + ++ ANF S+ D + V
Sbjct: 29 IDLFCGAGGMTLGFMQAGF-QPILSIDHDLPSIETHRANFPGMSICTDIRDFV------- 80
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
P D++V GPPCQGFS+L ++ K +L+N L ++ +P
Sbjct: 81 -------DFPS---ADVVVGGPPCQGFSRL--GKQARKERLENFLWKDYMRCVASSKPSV 128
Query: 241 IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY 300
++ENV F K+ + K+ Y++T VL + ++GV Q R R +++ S+ G
Sbjct: 129 FVIENVP---EFLKDPAFLGVSEESEKLGYKLTVSVLNAADFGVPQRRQRTIMIGSRIGP 185
Query: 301 KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP 360
PS P+ H N + P S TVRDAI DLP N + N
Sbjct: 186 --PSLPRATHQKPGDQM--------NLFTELPTWS-TVRDAIGDLPLEPTNENLHNSRNV 234
Query: 361 PKTHFQR 367
K +R
Sbjct: 235 SKLSLER 241
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTT---PNPLNKQGKILHPEQDRVLTVREYARAQGFPDS 566
R ++GRL WD TI T P ++G+ LHP DR +TVRE AR Q FPD
Sbjct: 269 RGGGSTDLMGRLEWDAPSLTIRTQFLKP----EKGRYLHPAADRSITVREGARLQTFPDD 324
Query: 567 YVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
+ F G + KQIGNAVP LA+ + E+ +
Sbjct: 325 FKFTGSVFQTVKQIGNAVPVELARQVALEVFQ 356
>gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806]
gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis KI3806]
Length = 326
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 110 FPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
FP + K +DLF+G GG G G K +S E+++ +Y +NF + + D
Sbjct: 11 FPNNENAKYKMIDLFAGIGGTRLGFHLTGEVKVVFSSEIDKFAKQTYKSNFSDEPL--GD 68
Query: 170 CNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTF 229
+ + H D++VAG PCQ FSQ + + E + L F
Sbjct: 69 IREINSEDIPNH--------------DILVAGFPCQAFSQAGKKKGFEDER--GTLFFEI 112
Query: 230 LSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRN 289
+ +PK +LENV L NK E L+ I L +NY +T+ VL+S ++G+ Q+R
Sbjct: 113 IIILKDKKPKTFLLENVKNLRTHNKGETLKVIEQHLKDLNYHITYKVLKSRDFGIPQNRE 172
Query: 290 RVVILA 295
R+ I+
Sbjct: 173 RIYIVG 178
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R LT RE AR QGFPD+++ YKQ GN+V P+ AI EI+K +
Sbjct: 274 RKLTPREAARLQGFPDNFLIPVSDNQAYKQFGNSVTVPVIFAIAKEILKVL 324
>gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010]
gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010]
Length = 326
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 35/230 (15%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
+ + LFSG GGL G AG + W+ + ++ +Y AN I D C S +
Sbjct: 14 RVVSLFSGAGGLDLGFKLAGF-QLAWANDFDKDAVETYRAN------IDDHCVCADISEV 66
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE-LEKSKLKNGLVFTFLSFCDLFQ 237
H +P + D+++ G PCQGFS N R L+K +N L ++ +
Sbjct: 67 SDH------DIP---DCDIMIGGFPCQGFSMANTKRNALDK---RNKLYLQYIRILKAKK 114
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P + + ENV G++ K E+++ I + Y+V + +L + +YGV Q+R RV+I+ +
Sbjct: 115 PMFFVAENVKGILTLGKGEVIKAIVSDFAEAGYRVVYQLLNAADYGVPQTRQRVIIVGVR 174
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
+ ++PQP + + + + R I+V++AI D+P
Sbjct: 175 NDLDVEFTYPQPTN--------------SKEGKNGLPRWISVQEAIKDIP 210
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 524 DESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNA 583
D+ TI+ N I H R +TVRE A Q FP + F G Y+QIGNA
Sbjct: 244 DKPSPTILARGNGGGGVVAIPHYNGLRRMTVRESATVQTFPLDFRFYGSRGSCYRQIGNA 303
Query: 584 VPPPLAKAIGYEIIKC 599
VP LA+ I +++ C
Sbjct: 304 VPVLLAQKIAEQLMTC 319
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQAILCDIVQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYRFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|390961243|ref|YP_006425077.1| hypothetical protein CL1_1080 [Thermococcus sp. CL1]
gi|390519551|gb|AFL95283.1| hypothetical protein CL1_1080 [Thermococcus sp. CL1]
Length = 445
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 163/380 (42%), Gaps = 62/380 (16%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQEC-----SVIQDDCNLVLK 175
+DLF GG G+ AG+ P +V+++ +Y+ NF+E + +++D +
Sbjct: 10 IDLFGAPGGFSLGMVLAGLV-PQAAVDIDPHGIRTYNYNFREAMGFDTTGLKEDLRKLPP 68
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR------ARELEKSKLKNG----- 224
++ ++ GV QK ++D++V GPPCQGFS R AR +K +KN
Sbjct: 69 EVI---SKESGV---QKGDIDVVVGGPPCQGFSIAGRVKIANLARNGKKKDVKNHHPRFI 122
Query: 225 ------LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF---- 274
L F+ D FQPK +I+ENV G++ E ++ I ++ Y V
Sbjct: 123 DDPRNILYREFVRIVDYFQPKIVIMENVPGMMSHRDGETVREIVDDFRRIGYIVPGWETG 182
Query: 275 ---DVLQSGNYGVAQSRNRVVILASKPGYK--LPSFPQPLHAFSNQLFTINGNLVANKTS 329
+L + ++GV Q+R R+ + K + F P+ + NL+ +
Sbjct: 183 NNPRILNAADFGVPQTRRRIFFVGIHQDEKSLIDEFKWPIPTHKDPEQPPKKNLIDYISG 242
Query: 330 --HAPYRSITVRDAISDLPRV----SQGANCY-LFH-NPPKTHFQRMMKDGSRIHDIHIN 381
H Y +TV AI DLP G Y +FH P + +Q + + D
Sbjct: 243 DLHPKYPYVTVGQAIGDLPEPVVANRSGMEDYPMFHIIHPFSRYQEWARKKTSFWD---- 298
Query: 382 LRELLQDHICKILSPLMEMRIRLIPSFPNAD-WRDLPNICVKLPRGQHSYTEKLKYNAKK 440
++ +HI + P E D W+DLP + + Y + + + K
Sbjct: 299 --GMVHNHISR---PHTERDRLTFEHMEEGDSWKDLPQHI----KAFYGYRDDI-FRDKF 348
Query: 441 KKSVCDCKSSSSCTSKGQKN 460
KK + D + S + T+ QK+
Sbjct: 349 KKLIWD-RPSWTITAHLQKD 367
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTPNPLNKQG-KILHPEQDRVLTVREYARAQGFPDSYV 568
R++ ++ +L WD TI L K G + +HP + R LT RE AR Q FPD +V
Sbjct: 340 RDDIFRDKFKKLIWDRPSWTITAH---LQKDGYRYIHPVKPRTLTPREAARLQSFPDWFV 396
Query: 569 FRGGICDMYKQIGNAVPP 586
F+G Y+QIGNAVPP
Sbjct: 397 FKGPRTAQYRQIGNAVPP 414
>gi|425467268|ref|ZP_18846552.1| Modification methylase XorII [Microcystis aeruginosa PCC 9809]
gi|389829982|emb|CCI28281.1| Modification methylase XorII [Microcystis aeruginosa PCC 9809]
Length = 422
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+GCGG+ GL AG +VE + + + NF C I D V +
Sbjct: 7 AIDLFAGCGGMSLGLEAAGF-DIAVAVEFDAVHSLVHHFNFPYCQTICRDIAKVTSREIW 65
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
+ KG + +V LI GPPCQGFS + + R+++ + N LVF +L +PK
Sbjct: 66 ELLKLKGYAT----DVSLIAGGPPCQGFSLIGK-RQIDDPR--NSLVFEYLRIVAEIKPK 118
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
Y I ENV G+ + L+ + + Y + +L + YG Q R R++++ S+
Sbjct: 119 YFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDASEYGAPQKRRRLILIGSR 178
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
+ +P + + N + + S V DAISDL
Sbjct: 179 KDVPMAKYP------------LAKTVDLNSAKKSAFTS--VYDAISDL 212
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T P P+ H R +TVRE AR FPD + F I +++IGNAV P L+K
Sbjct: 313 TAPRPI-------HYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKE 365
Query: 592 IGYEIIKCI 600
+G ++ +
Sbjct: 366 LGSSVMGAM 374
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKEAQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSGSAKRLQIGNAVPPLLSVALAQAVF 343
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 43/260 (16%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQ-ECSVIQDDCNLVLKSL 177
K +DLFSG GG G AG + ++++ + A+Y+ N + + +V D NL + L
Sbjct: 5 KIMDLFSGVGGFSLGFEMAGY-ETIFAIDFWKDAIATYNLNRKKDIAVHMDIANLTNEHL 63
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K L ++H+++ I+ GPPCQGFS + R++ +N L +
Sbjct: 64 RK---------LKEEHDIEGIIGGPPCQGFSTVG-TRDINDE--RNHLYLEYYRVVKEIM 111
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTF-DVLQSGNYGVAQSRNRVVILAS 296
PK+ ++ENV GL+ N + I + ++ Y+++ VL + +YGV Q+R RV +
Sbjct: 112 PKFFVIENVKGLLTLNNGMFKEDILNRFGELGYKISDPQVLNAADYGVPQNRQRVFFVGV 171
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP---RVSQGAN 353
G+ F P L NK ++ +A+SDLP ++ Q
Sbjct: 172 LDGH----FEYP-------------ELDENK--------VSTLEALSDLPVLDKIEQYNE 206
Query: 354 CYLFHNPPKTHFQRMMKDGS 373
Y + P+ +Q +M+ S
Sbjct: 207 VYNYSCDPQNSYQSIMRKNS 226
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
H ++RV +VRE AR Q FPD +VF G YKQ+GNAVPP LA I +++
Sbjct: 291 FHYSENRVPSVRECARIQSFPDDFVFIGTKSSQYKQVGNAVPPLLAYKIAQKLL 344
>gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 42/249 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ + LFSGCGGL G QAG P + E + + ++ AN +I+ D
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVAN-EFDPTIYETFKANHPHTHLIEGDI------- 52
Query: 178 LKGHTQHKGVSLPQ-----KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+GV++ EVD I+ GPPCQ +S+ R +E ++ + L + ++
Sbjct: 53 -------RGVTIEDIAPFVDGEVDGIIGGPPCQSWSEAGALRGIEDARGQ--LFYDYIRI 103
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
F+PK+ + ENV+G++ +E +Q I + Y VT ++ + NYGVA+ R RV
Sbjct: 104 LREFRPKFFLAENVSGMLANRHSEAVQNIITLFEEAGYDVTLTMVNAKNYGVAEERKRVF 163
Query: 293 ILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ + + FP+ ++ + IT+RD I DL +
Sbjct: 164 YIGFRKDLNIDFVFPK-------------------GSTEDDAKKITLRDVIWDLQETAVP 204
Query: 352 ANCYLFHNP 360
A HNP
Sbjct: 205 AAEKNRHNP 213
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEI 596
R +T+RE AR QGFPD + F + YK IGNAVP LA I I
Sbjct: 281 RRMTIREVARIQGFPDDFKFIYKETNNAYKMIGNAVPVNLAFEIATAI 328
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 148/346 (42%), Gaps = 65/346 (18%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ------DDCNLV 173
C+DLFSG GGL G AG V+ + + ++ AN ++ D+ +++
Sbjct: 7 CVDLFSGAGGLSRGFYDAGY-DVVLGVDFDDAALKTFKANHGTAESMKLDLFNHDNIDVI 65
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+ L + + Q +D++V GPPCQGFS + R++ + N L +
Sbjct: 66 VDYLAEKNIQ-----------LDVLVGGPPCQGFS-IAGPRDMNDKR--NSLYVAMVKLA 111
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
+ QP+ ++LENV G++ N + I ++ Y++T +L + +YG+ Q R RV
Sbjct: 112 ERLQPQAVVLENVPGMIQTNGGIGAKRIIEDFKEIGYRMTPKLLYAPDYGIPQIRKRVFF 171
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + FP+ +K ++ +T DAI DLP +
Sbjct: 172 VGLRNSDTEFEFPEAF---------------VDKENY-----VTSEDAIGDLPSLQTAEG 211
Query: 354 CYL-------FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIP 406
+ + + P+ +QR+M+ S +++HI I + I L+P
Sbjct: 212 EIIYGEEEQSYISEPQNAYQRLMRKNSHT----------VRNHIGSIPIEKTKRMISLVP 261
Query: 407 SFPNADWRDLPNICVKLPRGQHSYTEKL-KYNAKKKKSVCDCKSSS 451
N ++ LP +G + Y E L +Y++KK + + S
Sbjct: 262 EGKN--YKALPEEY----QGIYKYHEALTRYHSKKPSNTINTGHRS 301
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
H + +R+ TVRE AR Q FPD ++F G + Y+Q+GNAVPP L + + ++
Sbjct: 303 FHYKWNRIPTVRESARLQSFPDDFIFYGNKSEQYRQVGNAVPPMLGQVVAIKL 355
>gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 42/249 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ + LFSGCGGL G QAG P + E + + ++ AN +I+ D
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVAN-EFDPTIYETFKANHPHTHLIEGDI------- 52
Query: 178 LKGHTQHKGVSLPQ-----KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+GV++ EVD I+ GPPCQ +S+ R +E ++ + L + ++
Sbjct: 53 -------RGVTIEDIAPFVDGEVDGIIGGPPCQSWSEAGALRGIEDARGQ--LFYDYIRI 103
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
F+PK+ + ENV+G++ +E +Q I + Y VT ++ + NYGVA+ R RV
Sbjct: 104 LREFRPKFFLAENVSGMLANRHSEAVQNIITLFEEAGYDVTLTMVNAKNYGVAEERKRVF 163
Query: 293 ILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ + + FP+ ++ + IT+RD I DL +
Sbjct: 164 YIGFRKDLNIDFVFPK-------------------GSTEDDAKKITLRDVIWDLQETAVP 204
Query: 352 ANCYLFHNP 360
A HNP
Sbjct: 205 AAEKNRHNP 213
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEI 596
R +T+RE AR QGFPD + F + YK IGNAVP LA I I
Sbjct: 281 RRMTIREVARIQGFPDDFKFIYKETNNAYKMIGNAVPVNLAFEIATAI 328
>gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 42/249 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ + LFSGCGGL G QAG P + E + + ++ AN +I+ D
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVAN-EFDPTIYETFKANHPHTHLIEGDI------- 52
Query: 178 LKGHTQHKGVSLPQ-----KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
+GV++ EVD I+ GPPCQ +S+ R +E ++ + L + ++
Sbjct: 53 -------RGVTIEDIAPFVDGEVDGIIGGPPCQSWSEAGALRGIEDARGQ--LFYDYIRI 103
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
F+PK+ + ENV+G++ +E +Q I + Y VT ++ + NYGVA+ R RV
Sbjct: 104 LREFRPKFFLAENVSGMLANRHSEAVQNIITLFEEAGYDVTLTMVNAKNYGVAEERKRVF 163
Query: 293 ILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
+ + + FP+ ++ + IT+RD I DL +
Sbjct: 164 YIGFRKDLNIDFVFPK-------------------GSTEDDAKKITLRDVIWDLQETAVP 204
Query: 352 ANCYLFHNP 360
A HNP
Sbjct: 205 AAEKNRHNP 213
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEI 596
R +T+RE AR QGFPD + F + YK IGNAVP LA I I
Sbjct: 281 RRMTIREVARIQGFPDDFKFIYKETNNAYKMIGNAVPVNLAFEIATAI 328
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGV-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|319787207|ref|YP_004146682.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1]
gi|317465719|gb|ADV27451.1| DNA-cytosine methyltransferase [Pseudoxanthomonas suwonensis 11-1]
Length = 443
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 26/229 (11%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+G GGL G QAG +VE++ AA + NF C+V+ +S+
Sbjct: 7 IDLFAGAGGLSLGFEQAGF-DVVAAVEIDPVHAAVHAYNFPHCAVLP-------RSVTDL 58
Query: 181 HTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
QH + + +VD++ G PCQGFS + + R L+ +N LV F+
Sbjct: 59 TAQHIRDAAGIGTRKVDVVFGGAPCQGFSLIGQ-RALDDP--RNALVKDFVRLVRELDAD 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD--VLQSGNYGVAQSRNRVVILASK 297
Y + ENV GL + L + Y+V D VL + YGV Q R R+ +L K
Sbjct: 116 YFVFENVKGLTMGKHRKFLDELIQEFESAGYEVVRDWKVLNAYEYGVPQDRQRLFLLGCK 175
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLP 346
G ++P +P + T V AP T +DA+ DLP
Sbjct: 176 QGLRVPVYPGAI--------TSRPGAVGADLPSAP----TCQDALGDLP 212
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 522 AWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIG 581
A +S T+P P+ H + +R +TVRE AR GFPD + F +QIG
Sbjct: 306 AGTDSARGAFTSPRPI-------HYKWNRCVTVREMARLHGFPDWFRFNETKWHGARQIG 358
Query: 582 NAVPPPLAKAIGYEIIKCIG 601
NAVPPPL +A+ +++ +G
Sbjct: 359 NAVPPPLGRAVAAQVMNAMG 378
>gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 476
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 115 DTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLV 173
D P + L FSG GL G+ +AG+ P + E+E + + N +I D N
Sbjct: 71 DVPNIVALSFFSGAMGLDYGIEKAGI-HPLLASEIEPNARKTILLNRPNIGLIGDINNYS 129
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF-TFLSF 232
K + K ++ +K E+DL++ GPPCQ FS + + + K G VF TF+
Sbjct: 130 AKDI------RKFANISEKQEIDLVIGGPPCQAFSTAGQRKGFQD---KRGNVFLTFIDR 180
Query: 233 CDLFQPKYIILENVTGLV--------------------HFNKNEILQCIFHCLLKMNYQV 272
+PK+ ++ENV G++ K L I + L + Y V
Sbjct: 181 ILELRPKFAVIENVRGILSAPFECEEMEKRFGFAPKTPEEKKGGALLYILNKLEEGGYTV 240
Query: 273 TFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAP 332
TF++ + NYG Q R RVV S+ G K+P P F GN K
Sbjct: 241 TFNLYNAANYGAPQKRERVVFFCSRDGEKVPYLPPTNDEF--------GNFGLPKWR--- 289
Query: 333 YRSITVRDAISDLPRVSQGANCYLFHNPPKT-HFQRMMKDG 372
TVR+ +SDL Q A + P K + RM+K G
Sbjct: 290 ----TVREVLSDLKEDEQKAMKF----PEKRLKYFRMLKAG 322
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 516 GVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
G R+ WDE T+VT +P + HP++DR L+++EYAR Q FPD + F G + D
Sbjct: 349 GFFRRVGWDEPSPTLVT--DPTMPATDLCHPDKDRPLSIQEYARIQEFPDDWKFFGEMKD 406
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIGN 602
+YKQIGNAVP L AIG +++K + +
Sbjct: 407 VYKQIGNAVPISLGFAIGKQVVKLVSS 433
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + + W+ ++++ SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSKHPYFELIWANDIDKDAILSYQANHKEAQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +++++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SINILLGGPPCQSYSTLGKRKMDEKA----NLFKEYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + +Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIRERARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|421875759|ref|ZP_16307343.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
gi|372455266|emb|CCF16892.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
Length = 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 54/275 (19%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
LDLF G GG+ EG QAG P ++ + + A +Y Q+ N + L K
Sbjct: 4 VLDLFCGAGGMSEGFLQAGFEVP-FASDYSKEAAETYTKRHQQLGYDLKFFNDDIGKLTK 62
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
T ++ + +D+IV GPPCQGFS + E + +N L +L + +PK
Sbjct: 63 RSTLNEFLG---DTRIDVIVGGPPCQGFSLTGKRDE---NDPRNKLFLDYLKIVKMVKPK 116
Query: 240 YIILENVTGLVHFNKNE---ILQCIFHCLL----------KMNYQVTFDVLQSGNYGVAQ 286
Y ++ENV G++ + + I I+ L K Y V +L + +YGV Q
Sbjct: 117 YFVIENVEGILSYKVKKLKGISGTIYEDELVPNIIQKETEKFGYFVEHKLLNAKDYGVPQ 176
Query: 287 SRNRVVILAS------KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRD 340
+R RV+ + K + P FP+ NLV +TV D
Sbjct: 177 NRPRVIFFGTRIIKNRKNKLQKPKFPE------------KQNLV-----------VTVED 213
Query: 341 AISDLPRVSQG---ANCYLFHNPPKTHFQRMMKDG 372
AISDL + G AN + +N T +Q+++++G
Sbjct: 214 AISDLRFLKNGQESANYNVRYNV--TAYQQLLRNG 246
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 18/80 (22%)
Query: 529 TIVTTPNPLNKQGKILHPEQD--RVLTVREYARAQGFPDSYVFRGGICD----------M 576
T++T P+ I+H ++ R+LTVRE+AR Q F DS+VF G
Sbjct: 319 TVLTLPD------DIVHYDKGNPRILTVREFARLQSFDDSFVFYGKRTTGGDRRKFETPQ 372
Query: 577 YKQIGNAVPPPLAKAIGYEI 596
Y Q+GNAVPP A+AI EI
Sbjct: 373 YTQVGNAVPPLFARAIANEI 392
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYRFYGSASAKRLQIGNAVPPLLSVALAHAVF 343
>gi|161621504|gb|ABX75256.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 148
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 144 WSVELERSEAASYDANFQECSVIQDDCNLVLKSLL-------------------KGHTQH 184
W++E E ++ N E V ++CN++L++++ K +
Sbjct: 1 WAIEYEEPAGDAFKLNHPESLVFINNCNVILRAVMEKCGDTDDCISTSEAAELAKALDEK 60
Query: 185 KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILE 244
LP +VD I GPPCQGFS +NR + SK++ ++ LSF D F+PKY +LE
Sbjct: 61 VKNDLPLPWQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILASLSFADYFRPKYFLLE 120
Query: 245 NVTGLVHFNKNEILQCIFHCLLKMNYQV 272
NV LV FN+ + + LL+M YQV
Sbjct: 121 NVRNLVSFNEGQTFRLTLASLLEMGYQV 148
>gi|336063775|ref|YP_004558634.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
gi|334281975|dbj|BAK29548.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
Length = 394
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 43/283 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE----------CSVIQ 167
+ +DLF+G GGL GL AG+ ++VE + + N + +
Sbjct: 1 MNYIDLFAGSGGLSLGLYNAGL-DGVFAVEKSKDAFETLKYNLIDKKKHFSWPNWLEMRN 59
Query: 168 DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVF 227
D N +L++ H+ + VDLIV GPPCQGFS A + + + ++N L+
Sbjct: 60 WDINELLET-------HEDKLKTLRGSVDLIVGGPPCQGFSM---AGKRKNNDVRNQLMH 109
Query: 228 TFLSFCDLFQPKYIILENVTGL-VHFNKNEILQ----CIFHCLLKMNYQVTFDVLQSGNY 282
++++F L QP+ + ENV G V F N+ ++ + L + Y V F +++ ++
Sbjct: 110 SYVNFVKLIQPEMLFFENVQGFTVDFKINDKIKNYSSILVENLESLGYIVNFQMIKMSDF 169
Query: 283 GVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAI 342
GV Q+R R ++ ASK P F L +A+K P +T+ +AI
Sbjct: 170 GVPQNRKRFILFASKN-------PDDSKKFFRLLIEGKDKFLASKKIALP---VTISEAI 219
Query: 343 SDLPR-----VSQGANCYL--FHNPPKTHFQRMMKDGSRIHDI 378
DL R VS ++ + +++Q++M+ G R +++
Sbjct: 220 GDLNRKNGEVVSPDTKGFMNGIYGKTNSNYQKLMRKGIRKNNL 262
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 544 LHPEQDRVLTVREYARAQGFPDSYVFRGGICD----------MYKQIGNAVPPPLAKAIG 593
+H + R++TVRE+AR Q FPD Y F+G Y Q+ NAVPP A+ +G
Sbjct: 327 IHYSEPRIMTVREHARIQSFPDDYCFKGPYTTGGERRKIDVPRYTQVANAVPPLFAEQVG 386
Query: 594 YEII 597
I
Sbjct: 387 SVIF 390
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT 182
FSGCGGL G +AG S + E + A +Y NF + V++ D + ++
Sbjct: 34 FFSGCGGLDLGFERAGFDVALGSDQWEPA-AETYRRNFADTEVLEGDVRELDAPAIRDAV 92
Query: 183 QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR----ELEKSKLKNGLVFTFLSFCDLFQP 238
G VD+++ GPPCQGFS+LN + E+EK + +N L FL + +P
Sbjct: 93 AGAGYD---PDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDR-RNTLFEEFLRVVSVLEP 148
Query: 239 KYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+ +++ENV L++ ++ + I Y+ + VL++ YGV Q R R+ +
Sbjct: 149 RLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFIG 208
Query: 296 SKPGYKLPSFPQP 308
+ + FP+P
Sbjct: 209 TDRDVPI-RFPEP 220
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+HP +DR LT RE AR Q FPD + F G D+ KQIGNAVP L + + ++
Sbjct: 319 FIHPREDRYLTPREMARLQTFPDEFAFEGTKTDVLKQIGNAVPVRLGEELATQL 372
>gi|414159048|ref|ZP_11415340.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869031|gb|EKS16995.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 315
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSV-ELERSEAASYDANFQECSVIQ-DDCNLVLK 175
+K LDLF+G GG G+ AG C E+++ ASY A I+ D V
Sbjct: 1 MKFLDLFAGIGGFRLGMESAG--HECIGFCEIDKFARASYRAIHNTKGEIELHDITAVSD 58
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
++G + VD+I G PCQ FS R E ++ L F F +
Sbjct: 59 EFVRGIGR-----------VDIICGGFPCQAFSIAGARRGFEDTR--GTLFFEIARFASI 105
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+PKY+ LENV GL++ +K + I L ++ Y V + VL S N+GV Q+R RV I+
Sbjct: 106 LKPKYLFLENVKGLLNHDKGNTFETILSALDELGYDVEWQVLNSKNFGVPQNRERVFIIG 165
Query: 296 SKPGYK 301
Y+
Sbjct: 166 HSRRYR 171
>gi|417971912|ref|ZP_12612828.1| hypothetical protein CgS9114_12846 [Corynebacterium glutamicum
S9114]
gi|344043666|gb|EGV39354.1| hypothetical protein CgS9114_12846 [Corynebacterium glutamicum
S9114]
Length = 365
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 145 SVELERSEAASYDANFQE-CSVIQDDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPP 203
+VE + A+++ NF E S +D L + +L G T KG ++ +V G P
Sbjct: 35 AVEFDPVHMATHEYNFPETVSFARDVQTLSGEEILVG-TGLKG------EDIHAVVGGAP 87
Query: 204 CQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFH 263
CQGFS + + R L+ + N LV F QP+Y +LENV GL + L +
Sbjct: 88 CQGFSMIGK-RALDDPR--NQLVNEFARIVLEIQPRYFVLENVAGLATGKHRKFLDEVIE 144
Query: 264 CLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING 321
YQV VLQ+ +GV QSR R+V++ ++ LP +P+P H+ ING
Sbjct: 145 LFESNEYQVVTPVRVLQAAEFGVPQSRKRLVLIGARKDVPLPVYPEPTHSARK----ING 200
Query: 322 NLVANKTSHAPYRSITVRDAISDLPRVSQ 350
V+ +P +VR+A+ ++P Q
Sbjct: 201 QEVSGTLPLSP----SVREALVEIPDADQ 225
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN ++ C ++Q +C+
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKKTQTILCDIMQLNCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + L SF Q H F + T +++DA+ DLP + G N
Sbjct: 162 VGA-----LKSFKQKFH-FPKPIKT----------------HFSLKDALGDLPPIQSGEN 199
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPKNLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSSSAKRLQIGNAVPPLLSVALAQAVF 343
>gi|448326112|ref|ZP_21515482.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
gi|445613246|gb|ELY66954.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 184 HKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIIL 243
H+ + L + +DL+ GPPCQGFS++ + S +N L F+S+ + +PK +
Sbjct: 16 HEIIDLVDQRSIDLVAGGPPCQGFSEVVSP---DGSDDRNHLFTNFISWVNELEPKAALF 72
Query: 244 ENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLP 303
ENV G+ + + L+ + + Y VT V+ S ++GV Q R R+V +A++ +
Sbjct: 73 ENVRGIQNTAGGKFLEAVEKSFDLIGYDVTHRVINSSDFGVPQHRRRLVAIATRKDVR-- 130
Query: 304 SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNPPKT 363
H F F +N P + V D I DLP V G + P+T
Sbjct: 131 -----EHPFDG--FELN-----------PVETPGVMDGIGDLPEVGPGEEITEYDTEPRT 172
Query: 364 HFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKL 423
Q+ +++GS + L HI S M + +I P+ R ++
Sbjct: 173 LLQKDLRNGS----------DELSHHIAASHSQDM---VEMISHIPDGGNRTAIPDELQP 219
Query: 424 PRGQHSYTEKLKYN--AKKKKSVCDCKSSSSCTSKGQKNTIIP 464
G H+ +LK + A S SS+ C Q + P
Sbjct: 220 SSGYHNSYSRLKSDEPAVAITSNMSKPSSARCIHPFQDRGLTP 262
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G T IP L ++ +N++ RL DE +T+ + +HP QDR LT
Sbjct: 207 GGNRTAIPDELQPSSGYHNSYS----RLKSDEPA-VAITSNMSKPSSARCIHPFQDRGLT 261
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
RE AR Q FPD+Y F GG+ + +QIGNAVPP L +A+GY + + + N
Sbjct: 262 PREGARLQTFPDTYRFDGGLVSVRQQIGNAVPPYLGEALGYYLRESVYN 310
>gi|420414837|ref|ZP_14913953.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033804|gb|EJB34865.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 439
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 29/288 (10%)
Query: 69 ETIYTEYYRKTKDKHFVQP--NARPLELAYILKIIHSKEFLPKFPMPLDTPLKCLDLFSG 126
+T +YY K + NA P+ LAY + K+ K K +DLF G
Sbjct: 158 QTFQDDYYFYGNKKEILNQVGNAVPVFLAYQI----GKKIKDKIGC-----YKSVDLFCG 208
Query: 127 CGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHTQHKG 186
GG+ G +AG+ + ++++S + N E +V+ C + + +K +K
Sbjct: 209 AGGMTTGFKKAGIISLLGN-DIDKSACITLKVNNPEINVL---CGDITQQAIK----NKI 260
Query: 187 VSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENV 246
S+ + D+I GPPCQGFS A + +N L F+ +PK I+ ENV
Sbjct: 261 SSIALEQGADIICGGPPCQGFSM---AGFRADNDPRNQLFRDFIDVIKKVKPKIIVFENV 317
Query: 247 TGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK-LPS- 304
GL+ + K +I + I ++ Y V+ + +GV+Q R RV+I+ ++ +PS
Sbjct: 318 EGLLSYQKGKIYKEIHQLFSELGYNTNGRVMFANEFGVSQKRRRVIIICARDDLNIMPSE 377
Query: 305 -FPQPLHAFSNQLFTINGNL----VANKTSHAPYRSITVRDAISDLPR 347
FPQP+ + + T + + + A Y+S V A D R
Sbjct: 378 LFPQPITIEAKKQITAKDTIKDLEIIECSESAKYKSNNVNTATIDFLR 425
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 517 VLGRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
+ GR+ +++ TI T N P N G +HP +RV++VRE AR Q F D Y F G +
Sbjct: 115 LYGRIDYNKPSYTITTCFNRPGN--GTYVHPIHNRVISVREAARFQTFQDDYYFYGNKKE 172
Query: 576 MYKQIGNAVPPPLAKAIGYEIIKCIG 601
+ Q+GNAVP LA IG +I IG
Sbjct: 173 ILNQVGNAVPVFLAYQIGKKIKDKIG 198
>gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18]
gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140]
gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1]
gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|385336874|ref|YP_005890821.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107]
gi|462655|sp|P08455.2|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII;
AltName: Full=Cytosine-specific methyltransferase NgoPII
gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 330
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 36/229 (15%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSGCGGL G +AG P + E +++ A++ AN + +I+ D +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI---- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K P+ E+D I+ GPPCQ +S+ R ++ ++ + L F ++ Q
Sbjct: 56 -------KEEDFPE--EIDGIIGGPPCQSWSEAGALRGIDDARGQ--LFFDYIRILKSKQ 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ N +Q + Y VT + + +YGVAQ R RV + +
Sbjct: 105 PKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGFR 164
Query: 298 PGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
++ SFP+ G+ V +K IT++D I DL
Sbjct: 165 KDLEIKFSFPK-------------GSTVEDKD------KITLKDVIWDL 194
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
R +TVRE AR QGFPD++ F + D YK IGNAVP LA I I K +
Sbjct: 277 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 328
>gi|425070527|ref|ZP_18473640.1| DNA (cytosine-5-)-methyltransferase [Proteus mirabilis WGLW6]
gi|404594824|gb|EKA95380.1| DNA (cytosine-5-)-methyltransferase [Proteus mirabilis WGLW6]
Length = 418
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 52/271 (19%)
Query: 114 LDTPLKCLDLFSGCGGLMEGLCQAGV---------AKPCWSVELER-------------- 150
+ +PLK LDLF+G GGL EG +AG A C++++ +
Sbjct: 1 MSSPLKFLDLFAGAGGLSEGFIRAGFKPVAHVEADASACFTLKTRQAFHWLKNNNAIYIY 60
Query: 151 SEAASYDANFQEC--SVIQDDCNLVLKSLLKGHTQH----KGVSLPQKHEVDLIVAGPPC 204
S+ + QE +V ++ + V+ + T K S ++DLI+ GPPC
Sbjct: 61 SKYLKNEVTRQELYDAVPSNEIDSVINEFIGSDTLKTIFKKVDSQLNNSKLDLIIGGPPC 120
Query: 205 QGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHF---NKNEILQCI 261
Q +S + RAR +N L + F ++PKY + ENV GL+ N + +
Sbjct: 121 QAYSLIGRARGNINDDPRNHLYKYYAEFLKKYKPKYFVFENVLGLLTAKDPNGDLYFDKM 180
Query: 262 FHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING 321
+++ Y + + VL + YGV Q+R R++++ + SF + ++ +
Sbjct: 181 KSLFIEIGYSIEYKVLSANEYGVLQNRKRIILVGKRGHRSKKSFYPEIEKWTPE------ 234
Query: 322 NLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
TV D + DLP+V+ G
Sbjct: 235 --------------ATVWDLLKDLPKVNAGG 251
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 544 LHPE--QDRVLTVREYARAQGFPDSYVF-----RGGICDMYKQIGNAVPPPLAKAIGYEI 596
+HP+ Q+R LT RE AR Q FPD Y F + +KQIGNAVP LA+ I +
Sbjct: 355 IHPDINQNRSLTPREAARIQSFPDDYYFENVSGKPARTTAFKQIGNAVPVLLAQKIAEHL 414
Query: 597 IK 598
++
Sbjct: 415 LR 416
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+ D+F G GGL G + W+ ++++ SY AN + I D
Sbjct: 3 FRVADIFCGAGGLSYGFSTHPNFELIWANDIDKDAILSYQANHKNTQTILCDI------- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
TQ +LP + ++D+++ GPPCQ +S L + + EK+ L +L DL +
Sbjct: 56 ----TQLNCQNLP-RTQIDILLGGPPCQSYSTLGKRQMDEKA----NLFKEYLRVLDLVK 106
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK I ENV GL+ K ++ + I Y + + +L + +YGV Q R RV+++
Sbjct: 107 PKIFIFENVVGLMSMQKGQLFKKICSAFKDRGYILEYTILNALDYGVPQIRERVILVGVL 166
Query: 298 PGY-KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+ + FP+P + +++DA+ DLP++ G N
Sbjct: 167 KNFNRQFYFPKPTK-----------------------KHFSLKDALGDLPQIQSGEN 200
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 246 GQSKDDLPKDLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 297
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q F D Y F G QIGNAVPP L+ A+ + +
Sbjct: 298 ALSIREGARLQSFRDDYKFYGSASAKRLQIGNAVPPLLSVALAHAVF 344
>gi|336400726|ref|ZP_08581499.1| hypothetical protein HMPREF0404_00790 [Fusobacterium sp. 21_1A]
gi|336161751|gb|EGN64742.1| hypothetical protein HMPREF0404_00790 [Fusobacterium sp. 21_1A]
Length = 433
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---------DDC 170
+DLF G GG+ EG+ QAG +S E+ + + +Y ++ + Q D
Sbjct: 5 AIDLFCGAGGMSEGILQAGFH-IIFSNEISKDASETYRKRHEQLGLEQGKNTWLEVADIK 63
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
N+ + K ++ K + E+D I GPPCQGFS RA + E + ++N L +L
Sbjct: 64 NITGTYIKKKISELKDFKENKNIEIDAIFGGPPCQGFS---RAGKQEVNDIRNLLFKEYL 120
Query: 231 SFCDLFQPKYIILENVTGLVHF---------------NKNEILQCIFHCLLKMNYQVTF- 274
+PKY++ ENV G+V NKN I I + L K+ Y +
Sbjct: 121 RVVSEIKPKYLVFENVPGIVDIKFKNFISDFNNESYKNKNAI-DIIRNELKKIGYNLLEP 179
Query: 275 DVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYR 334
+L + NYGV Q+R+R++++ + K P +P+ +
Sbjct: 180 RILNASNYGVPQNRHRLILIGFRNDMKEPKYPKEFK-----------------------Q 216
Query: 335 SITVRDAISDL 345
+T+R+A+SDL
Sbjct: 217 KVTLREALSDL 227
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD---- 575
+L D+ +T++T P+ L + P +R+ +VRE+AR Q F DS+VF G
Sbjct: 346 KLYLDKPSNTVLTLPDDL------ILPICNRICSVREFARLQSFDDSFVFYGKRTTGGKA 399
Query: 576 ------MYKQIGNAVPPPLAKAIGYEIIKCI 600
Y Q+GNAVPP LAKAI EI K +
Sbjct: 400 RKNEVPQYTQVGNAVPPLLAKAIALEIYKVL 430
>gi|385221953|ref|YP_005771086.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 52/242 (21%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDC-NL 172
K D+F G GGL G + W+ ++++ SY AN +E C + Q DC NL
Sbjct: 3 KVADIFCGAGGLSYGFSMHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLDCYNL 62
Query: 173 VLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSF 232
S +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 63 PCTS------------------IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRL 100
Query: 233 CDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV+
Sbjct: 101 LDLVKPKIFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVI 160
Query: 293 ILASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQG 351
++ +K FP+P +++DA+ DLP + G
Sbjct: 161 LVGVLKSFKQKFYFPKPTKM-----------------------HFSLKDALGDLPPIQSG 197
Query: 352 AN 353
N
Sbjct: 198 EN 199
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
GQ +P SL + N + + W E +T + +HP R L+
Sbjct: 245 GQSKDDLPESLRPKSGYINTYAKM-----WLEKPAPTITRNFSTPSSSRCIHPRDSRALS 299
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
+RE AR Q FPD+Y F G QIGNAVPP L+ A+ + I
Sbjct: 300 IREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSVALAHAIF 343
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSTHSYFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQNKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|85818104|gb|EAQ39272.1| DNA (cytosine-5-)-methyltransferase [Dokdonia donghaensis MED134]
Length = 409
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 63/301 (20%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELER----------------SEAAS---YD- 157
L +DLFSG GGL EG +AG KP VE+++ SE + YD
Sbjct: 4 LNFIDLFSGAGGLSEGFIKAGF-KPIAHVEIDKKACDTLETRLIYHKLNSENKTEKYYDY 62
Query: 158 -------ANFQECSVIQDDCNLVLKSLLKGHTQH----KGVSLPQKHEVDLIVAGPPCQG 206
F + + N V+ + G K +L + ++DLI+ GPPCQ
Sbjct: 63 ISEKITREEFIKTFSNSELSNSVINIPIGGKNNKIIFDKIDTLAKGKQIDLIIGGPPCQA 122
Query: 207 FSQLNRARELE--KSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHC 264
+S + R+R+ + K+ +N L + F ++PK + ENV GL+ K + +
Sbjct: 123 YSLVGRSRDKDGMKNDPRNFLYKEYAKFLKKYEPKVFVFENVMGLITAEKGSYFKNMQAY 182
Query: 265 LLKMNYQVTFDVLQSGNYGVAQSRNRVVILA--SKPGYKLPSFPQPLHAFSNQLFTINGN 322
++ Y++ + + +S ++GV Q R R++++ G+K P F + F
Sbjct: 183 FKRIGYELDYTIQKSEHFGVLQKRRRIILIGWQKGSGFKYPEFEELDEKF---------- 232
Query: 323 LVANKTSHAPYRSITVRDAISDLPRVSQG--ANCYLFHNPPKTHFQRM-MKDGSRIHDIH 379
T+R +SDL ++ G N + P T+ +R +++G H
Sbjct: 233 --------------TIRQILSDLKKLKPGDQKNVTKYAKPITTYLERFELRNGVDFVTQH 278
Query: 380 I 380
I
Sbjct: 279 I 279
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+Q R L+VRE AR Q FPD + F GG ++QIGNAVPP +AK I +I
Sbjct: 356 KQIRSLSVREAARIQSFPDDFFFEGGRSAAFRQIGNAVPPLMAKEIAKKI 405
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K LDLF G GG GL K ++ ++ +++ N + + C + + +
Sbjct: 4 KVLDLFCGAGGFSTGLEHLKEFKTLIGLDFDKQALMTFENNHKNAIGV---CGDITEQEI 60
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
K +L ++++I+ GPPCQGFS N+ + L +N L ++ +P
Sbjct: 61 KSQVIQHAKNL----KINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIDIVKAIKP 114
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
+ I+ENV L+ K L+ I + YQ+++ +L + +YGV QSR R I+ ++
Sbjct: 115 QIFIIENVKNLISCAKGYFLKEIKEKFNILGYQLSYHILNARDYGVPQSRERAFIVGAR- 173
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRV--SQGANCYL 356
F + NL+ P + ++V++AISDL + ++GA
Sbjct: 174 -----------------YFNFDFNLL------EPLQIVSVKEAISDLAYLNSNEGAFESD 210
Query: 357 FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
+ P ++ +Q +M+ S L +H S + +++LIP+
Sbjct: 211 YSKPIQSTYQALMRKNSN----------KLYNHKATNHSEIALEKLKLIPN 251
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 514 WQGVLGRLAWDE---SFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFR 570
++ GRL+WD+ + DT TP+ G HPE R +T RE AR Q F D Y+F
Sbjct: 268 FKSTWGRLSWDKVSPTIDTRFDTPS----NGTNSHPELHRSITPREAARIQSFSDDYIFY 323
Query: 571 GGICDMYKQIGNAVPP 586
G + KQIGNAVPP
Sbjct: 324 GNKTSICKQIGNAVPP 339
>gi|421714623|ref|ZP_16153944.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407218308|gb|EKE88137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHSHFELIWANDIDKDAILSYQANHKEAQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYTNTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSASAKRLQIGNAVPPLLSAALAHAVF 343
>gi|385220298|ref|YP_005781770.1| type II DNA modification [Helicobacter pylori India7]
gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGVLKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQNKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|296313785|ref|ZP_06863726.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768]
gi|296839714|gb|EFH23652.1| modification methylase NgoPII [Neisseria polysaccharea ATCC 43768]
Length = 330
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSGCGGL G +AG P + E +++ +++ AN + +I+ D +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEVPV-ANEYDKTIWSTFKANHPKTHLIEGDIRSI---- 55
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
K P E+D I+ GPPCQ +S+ R ++ + + L F ++ Q
Sbjct: 56 -------KEEDFPD--EIDGIIGGPPCQSWSEAGALRGIDDERGQ--LFFDYIRILKSKQ 104
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK+ + ENV+G++ NE +Q + + Y V+ ++ + +YGVAQ R RV + +
Sbjct: 105 PKFFLAENVSGMLANRHNEAVQNLLKMFDECGYDVSLTMVNAKDYGVAQERKRVFYIGFR 164
Query: 298 PGYKLP-SFP 306
K+ SFP
Sbjct: 165 KDLKIKFSFP 174
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 550 RVLTVREYARAQGFPDSYVF-RGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
R +TVRE AR QGFPD + F I D YK IGNAVP LA I I K
Sbjct: 277 RRMTVREVARVQGFPDDFKFIYQNINDAYKMIGNAVPVNLAYEIAVAIKK 326
>gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
Length = 1252
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ L +FSG G L GL + G K +V+ + AN ++ + C V L
Sbjct: 654 LRGLSIFSGGGSLDRGLEEGGAVKIHTAVDFSSEACHTQRANAKDPGGLHIYCGSVDDYL 713
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
T+ + + EVDLIVAG PC GFS L R + +S + TF SF D+++
Sbjct: 714 DAVLTRKDQKLIARVGEVDLIVAGSPCPGFSSLQRNWKSPQSLCNASHISTFCSFVDVYR 773
Query: 238 PKYIILENVTGLVH----FNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P Y ILENV + + +L + L+ M YQV ++ + Y Q R+R+V+
Sbjct: 774 PLYGILENVVNMSSTRKGYENQNVLSQVVASLVSMGYQVNQYIMDAWCYSSKQQRSRIVL 833
Query: 294 LASKPGYKLPSFPQPLHA 311
+ P L QP H
Sbjct: 834 TIAAP--HLNPIQQPWHT 849
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 541 GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
G +H +QDR +++ E RAQG+PD G + + YK IGN V +A AIG + + +
Sbjct: 984 GASVHWDQDRSISILEARRAQGYPDDEPIIGNLKEQYKIIGNGVDRKVAFAIGLSLSQAM 1043
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + + W+ ++++ SY AN +E C + Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSKHPHFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG-6]
gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 438
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 46/277 (16%)
Query: 114 LDTP--LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
LD P L LDLF G GG+ G ++G ++ E + ++ NF + D
Sbjct: 51 LDNPNTLITLDLFCGAGGMSLGF-ESGNFFVAAGIDAEPAAVMTHKYNFLSKGIACD--- 106
Query: 172 LVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR----ELEK--SKLKNGL 225
++ + + LP+ VD+I+ GPPCQGF+++ + + ELE ++ N L
Sbjct: 107 --IREISDPRELLATLGLPR---VDVIIGGPPCQGFARIGKGKIRSIELESHYEEVLNSL 161
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
F+ F ++ QP ++ENV + + E+L I + K Y + + +L + +YGV
Sbjct: 162 YKEFMRFVEILQPLAFVMENVPDMARYQNGEVLNRIRNKCTK--YTIEWRILNAVDYGVP 219
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDL 345
Q R R+ I ++ G + +P ++ T N R +TVRDAISDL
Sbjct: 220 QRRQRLFIQGNRLGQNI-RWP--------KIETTN-------------RFVTVRDAISDL 257
Query: 346 P-RVSQGANCYLFHNPPK--THFQRMMKDGSRIHDIH 379
P R L + P T +Q+ M++G +H+ H
Sbjct: 258 PNRTPPSLEEILPYQPQHSLTEYQKKMREG--LHEDH 292
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
GQK IP L R + + RL +D+ T+ T + + +HPE R L+
Sbjct: 318 GQKYRDIPTEL--QRYRTDIFDDKYWRLIYDQPSWTV--TAHIRKDAYRYIHPEYSRTLS 373
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+RE+AR Q FPD ++F G + +QIGNAVPP LA+AI E+
Sbjct: 374 IREFARLQSFPDRFLFAGPRTERLRQIGNAVPPLLAQAIAIEL 416
>gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 342
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 67/305 (21%)
Query: 120 CLDLFSGCGGLMEGLCQAGV----AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
+DLF G GG +G AG W + +E ++ N + I D +
Sbjct: 6 VIDLFCGIGGFSKGFEMAGFDVLFGIDIWDIAIE-----TFQHNHKNTEGILADLTELDD 60
Query: 176 SLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
K +T ++VD+I+AGPPCQGFS + +K +N L + +
Sbjct: 61 DFFKQYT----------NKVDVIIAGPPCQGFSMCGKREVGDK---RNELFQEVVRAVKI 107
Query: 236 FQPKYIILENVTGLV---HFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVV 292
PK +I+ENV GL+ + + ++ I K+ Y+ + +L + +GV Q R RV+
Sbjct: 108 INPKIVIIENVVGLLSMENVDGEDVKGLIVSEFEKLGYETNYKILDASEHGVPQKRKRVI 167
Query: 293 ILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ S+ G FP+P + ++V +A+ ++P +
Sbjct: 168 FIGSRIGD--VEFPKPKD-----------------------KKVSVMEALGNIPDTN--- 199
Query: 353 NCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNAD 412
+ +++ P FQ +M DG + H ++ H K+L RI +P +
Sbjct: 200 --FEYYDEPTNSFQELMADGEKKIYNHDAMK-----HNEKVLK-----RIENVPQ--GGN 245
Query: 413 WRDLP 417
W+D+P
Sbjct: 246 WQDIP 250
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIK 598
I+HP +RV+T RE AR Q PDS++ +G ++Q+ NAVPP L IG +IIK
Sbjct: 284 IIHPTFNRVITAREAARLQSIPDSFIIKGNKTAQHQQLANAVPPLLGYEIGKQIIK 339
>gi|420432040|ref|ZP_14931059.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393049633|gb|EJB50599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 40/236 (16%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K D+F G GGL G + W+ ++++ SY AN +E I D +
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQL----- 57
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
H +P +D+++ GPPCQ +S L + + EK+ L +L DL +P
Sbjct: 58 ---HYHNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLLDLVKP 106
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV+++ +
Sbjct: 107 KIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
Query: 299 GYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+K FP+P+ +++DA+ DLP + G N
Sbjct: 167 SFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGEN 199
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSVALAHAVF 343
>gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
Length = 440
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQ---------DDC 170
+DLF G GG+ EG+ QAG +S E+ + + +Y ++ + Q D
Sbjct: 12 AIDLFCGAGGMSEGILQAGFH-IIFSNEISKDASETYRKRHEQLGLEQGKNTWLEVADIK 70
Query: 171 NLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFL 230
N+ + K ++ K + E+D I GPPCQGFS RA + E + ++N L +L
Sbjct: 71 NITGTYIKKKISELKDFKENKNIEIDAIFGGPPCQGFS---RAGKQEVNDIRNLLFKEYL 127
Query: 231 SFCDLFQPKYIILENVTGLVHF---------------NKNEILQCIFHCLLKMNYQVTF- 274
+PKY++ ENV G+V NKN I I + L K+ Y +
Sbjct: 128 RVVSEIKPKYLVFENVPGIVDIKFKNFISDFNNESYKNKNAI-DIIRNELKKIGYNLLEP 186
Query: 275 DVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYR 334
+L + NYGV Q+R+R++++ + K P +P+ +
Sbjct: 187 RILNASNYGVPQNRHRLILIGFRNDMKEPKYPKEFK-----------------------Q 223
Query: 335 SITVRDAISDL 345
+T+R+A+SDL
Sbjct: 224 KVTLREALSDL 234
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD---- 575
+L D+ +T++T P+ L + P +R+ +VRE+AR Q F DS+VF G
Sbjct: 353 KLYLDKPSNTVLTLPDDL------ILPICNRICSVREFARLQSFDDSFVFYGKRTTGGKA 406
Query: 576 ------MYKQIGNAVPPPLAKAIGYEIIKCI 600
Y Q+GNAVPP LAKAI EI K +
Sbjct: 407 RKNEVPQYTQVGNAVPPLLAKAIALEIYKVL 437
>gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus]
Length = 429
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 31/280 (11%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN-LVLKSLL 178
+ LF+G GG G QAG+ KP + E+ +Y N + C+ L L ++
Sbjct: 7 VVSLFAGAGGFSSGFSQAGL-KPLFGAEINADACQTYQEN------VGSPCHQLDLSTVD 59
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
H + L +++ GPPCQGFS A + +N L+F +L+ + P
Sbjct: 60 PSHIEM----LTGGKRPFVVIGGPPCQGFST---AGPRNFADPRNLLIFNYLNIVERLSP 112
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
++ I ENV GL+ L + + M Y V + YGV Q+R RV+I+ ++
Sbjct: 113 RWFIFENVEGLLTSGGGRDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIGNRL 172
Query: 299 GYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFH 358
G FP+ L++F + A K S P + ++ +A++ L + + + +
Sbjct: 173 GIDF-QFPEELYSFDSG--------KAKKASGKPL-APSLAEAVAGLGPAASDKDALVPY 222
Query: 359 --NPPKTHFQRMMKDGSRI----HDIHINLRELLQDHICK 392
+ P F M+ G+R+ H + + E +Q + K
Sbjct: 223 ASSEPVNAFDARMRAGNRVEVVTHHVRVEAAERMQVELLK 262
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAI 592
+ +HP + R LT+RE AR Q FPD Y + G + +QIGNAVPP A+ +
Sbjct: 322 EFIHPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQIGNAVPPLAAERL 372
>gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 444
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 30/238 (12%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
L FSGCGG+ EG AG + + +E+ A++D NF + +D + ++ +K
Sbjct: 106 VLTAFSGCGGMAEGFRMAGFSVEGY-IEVVPEARATFDRNFPGARCLGEDIRAIDEARVK 164
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
L + ++D++ GPPCQGFS R ++ +N L L +L +PK
Sbjct: 165 --------DLLAQVDIDVLAGGPPCQGFSLAGR---RDRDDPRNHLFRNLLQLAELVKPK 213
Query: 240 YIILENVTGLVHF---NKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+++ENV L+ + ++ I + Y + + + + +YGV Q R RV I+A+
Sbjct: 214 VLVMENVRLLLSMKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVAT 273
Query: 297 KPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANC 354
+ + PL F + +NG AP R T RDA DL + G C
Sbjct: 274 RRDSSI----GPLR-FPPKTHGVNGV--------APLR--TFRDATVDLAPLESGQAC 316
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WDE T+ TT ++ + +HP+ R LTVRE AR Q FPD YVF G +
Sbjct: 364 RLRWDEPASTVGTTFGMISAS-RNVHPKHTRSLTVREAARLQTFPDDYVFEGKWGAVRTM 422
Query: 580 IGNAVPPPLAKAIGYEIIKCIG 601
IGNAVPP LA + EI K +G
Sbjct: 423 IGNAVPPQLASVLAGEIKKALG 444
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKEAQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCIP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK I ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFIFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C + Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRIL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKSFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|379736894|ref|YP_005330400.1| cytosine-specific methyltransferase [Blastococcus saxobsidens DD2]
gi|378784701|emb|CCG04370.1| Cytosine-specific methyltransferase [Blastococcus saxobsidens DD2]
Length = 364
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 28/195 (14%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG 180
+DLF+GCGG+ G G +VE AA+Y ANF E D V +
Sbjct: 8 IDLFAGCGGMTVGFADQGFTSKL-AVEWNLFAAATYAANFGEEHTKWGDIAEVSDGEIP- 65
Query: 181 HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY 240
+VD+I+ GPPCQGFS L +++++ +N L ++ F + +P+
Sbjct: 66 -------------DVDVIIGGPPCQGFSNLG-SKDVDDP--RNQLWKQYMRFVQVAKPQV 109
Query: 241 IILENVTGLVHFNKNEILQCIF----HCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+LENV+ F + Q + H ++K +Y++T VL + +YGVAQ R R +++ S
Sbjct: 110 FVLENVS---RFRNSSEFQLLLNEADHGMIK-DYELTHGVLLAADYGVAQRRPRTIVIGS 165
Query: 297 KPGYKLPSFPQPLHA 311
+ G P P HA
Sbjct: 166 RVGRI--DLPTPTHA 178
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 517 VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQD--------RVLTVREYARAQGFPDSYV 568
V+GR+ WD TI T K G+ LHP+ + RV+T E A Q FP +
Sbjct: 273 VMGRMIWDAPSLTIRTEFYKPEK-GQYLHPQWEPDESKQVNRVITHYEAALLQDFPRDFE 331
Query: 569 FRGGICDMYKQIGNAVPPPLAKAIGYEI 596
+ G ++ +QIGNAVP LAKAI I
Sbjct: 332 WCGSKVEIARQIGNAVPAGLAKAIARHI 359
>gi|385218742|ref|YP_005780217.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 40/236 (16%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLL 178
K D+F G GGL G + W+ ++++ SY AN +E I D +
Sbjct: 3 KVADIFCGAGGLSYGFSVHPHFELIWANDIDKDAILSYQANHKETQTILCDIAQL----- 57
Query: 179 KGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQP 238
H +P +D+++ GPPCQ +S L + + EK+ L +L DL +P
Sbjct: 58 ---HYHNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLLDLVKP 106
Query: 239 KYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKP 298
K + ENV GL+ K ++ Q I + + Y + +L + +YGV Q R RV+++ +
Sbjct: 107 KIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
Query: 299 GYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGAN 353
+K FP+P+ +++DA+ DLP + G N
Sbjct: 167 SFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGEN 199
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P +L + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPENLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ + +
Sbjct: 297 ALSIREGARLQSFPDNYKFYGSGSAKRLQIGNAVPPLLSAALAHAVF 343
>gi|348590515|ref|YP_004874977.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347974419|gb|AEP36954.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|399116677|emb|CCG19485.1| cytosine-specific methyltransferase [Taylorella asinigenitalis
14/45]
Length = 333
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 120 CLDLFSGCGGLMEGLCQA--GVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+DLF+G GG+ G QA K ++ E++ + +Y +NF +I D +++
Sbjct: 4 SIDLFAGIGGIRLGFEQAFGEKLKTVYASEIDSNAVKTYVSNFSSKKIIHGDVTKEVEAD 63
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ H D ++AG PCQ FS R + ++ L F +
Sbjct: 64 IPAH--------------DFLLAGFPCQAFSAAGRKMGFDDAR--GTLFFDVARIIKFHK 107
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
PK + ENV LV+ +K + I + L ++ Y+V F VL S N+GV Q+R R+ I+A +
Sbjct: 108 PKVVFAENVKNLVNHDKGTTFKIILNVLKELGYEVFFQVLNSKNFGVPQNRERIYIVAFR 167
Query: 298 P--GYKLPSFPQPLH 310
G + FP+ ++
Sbjct: 168 ENLGIRRFDFPEGIN 182
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 538 NKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
N +G+I + E R +T RE+AR QGFP+++ +YKQ+GN+V P+ KAI I
Sbjct: 263 NIKGEI-NKEFVRRMTPREWARLQGFPETFKLPIADTHLYKQLGNSVTVPVVKAIALRI 320
>gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
Length = 434
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 17/239 (7%)
Query: 120 CLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLK 179
+DLF+G GG+ G QAG SVEL+ A + NF V+ C V ++
Sbjct: 8 AVDLFAGAGGMTLGFEQAGF-DVLVSVELDPIHCAIHKFNFPFWKVL---CKSVEETT-- 61
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
++ + S E+D++ GPPCQGFS + + R ++ + N L F F+ QP
Sbjct: 62 -GSEIRNSSDIGNQEIDVVFGGPPCQGFSLIGK-RSIDDPR--NTLGFHFIRLVLELQPN 117
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVT--FDVLQSGNYGVAQSRNRVVILASK 297
+ +LENV G+ E I Y+V + +L + NYGV Q+R R+ +L +
Sbjct: 118 FFVLENVKGMTVGKHKEFTTEIIDKFENNGYKVNRNYQLLNAANYGVPQNRERLFLLGCR 177
Query: 298 PGYKLPSFPQPLHAFSNQLFTINGNLVA-NKTSHAPYRSITVRDAISDLPRVSQGANCY 355
KLP+ P + + +I +A +K P TV AI DLP + Y
Sbjct: 178 QDLKLPNHPDKITHPAKSNNSIACTTIALSKLPSTP----TVLQAIQDLPEIENYPELY 232
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 532 TTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKA 591
T+P P+ HP + R +TVRE AR +PD + F ++QIGN+VPP LA+A
Sbjct: 326 TSPRPI-------HPFKPRCITVREAARLHSYPDWFRFHPTKWHGFRQIGNSVPPLLAQA 378
Query: 592 IGYEIIKCIG 601
+ EIIK +G
Sbjct: 379 VASEIIKVLG 388
>gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
Length = 365
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L +DLF GCGGL GL +AG + +V+ + +Y +N ++ V + D +
Sbjct: 17 LIAIDLFCGCGGLTVGLKRAGF-RVIGAVDNDPIAITTYRSNHRDVKVWKKDI-----TK 70
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQL---NRARELEKSKLKNGLVFTFLSFCD 234
LK T K + L +K E+DL+ PPCQGF+ L N ++E+E + N LV F F
Sbjct: 71 LKIDTVKKRLKL-RKGELDLVAGCPPCQGFTSLRTLNGSKEVEDPR--NDLVLEFQRFVK 127
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+PK +++ENV L + + L ++ Y + +L +GNYGV Q R R++ +
Sbjct: 128 YLRPKAVMMENVPELAEDKRFTDFKAY---LKRLGYVGQYRILDAGNYGVPQRRERLIYI 184
Query: 295 AS 296
AS
Sbjct: 185 AS 186
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 510 RNNNWQGVLGRLAWDESFDTIVTTP-NPLNKQGKILHPEQDRVLTVREYARAQGFPDSYV 568
R ++ V GR+AWD TI + NP +G+ LHPE+DR +T+RE A QG P Y
Sbjct: 259 RCGGFKDVYGRMAWDRQAPTITSGCFNP--SKGRFLHPEEDRAITMREAALLQGLPRKYK 316
Query: 569 FRG--GICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
FRG + IGN PPP A I K + N
Sbjct: 317 FRGTKSKSAIALMIGNVFPPPFTAAHARMIRKVLIN 352
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C+
Sbjct: 3 KVADIFCGAGGLSYGFSTHPYFELVWANDIDKDAILSYQANHKEAQTILCDIVQLHCH-- 60
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
+LP +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 61 --------------NLPCV-SIDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKIFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFYFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|46019827|emb|CAE52349.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
Length = 408
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 39/269 (14%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL--- 174
+ ++LF+G GGL++GL Q+G + +VE + + + + IQD +VL
Sbjct: 3 INNIELFAGAGGLVDGLEQSGNIQLLSAVEWLKPQVRTLVNRLESKYNIQDAKEIVLNFD 62
Query: 175 ----KSLLKG--HTQHKGVS-----LPQKHEVDLIVAGPPCQGFSQLNRARELE--KSKL 221
+ L+ G + + G S + EV +I GPPCQ + R R+ K
Sbjct: 63 IQRTEELINGWSNDEEFGSSPGLAKIVGNKEVHMISGGPPCQAYPLAGRVRDNNGMKDDY 122
Query: 222 KNGLVFTFLSFCDLFQPKYIILENVTGLVHF--NKNEILQCIFHCLLKMNYQVTFDVLQS 279
+N L +++ + FQPK I+ ENV G++ +I I + Y++ D+ ++
Sbjct: 123 RNFLFESYIKVVEYFQPKIILFENVEGILSAIPTGEKITSLIKQGFNNIGYEIIDDLRKN 182
Query: 280 G-----NYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYR 334
++GV Q R RV+I+ + + + + L NQ+++ L+ N ++H +
Sbjct: 183 ALFDMSDFGVPQKRKRVIIIGVRRDNQSTDYQEIL----NQIYS----LIHNLSTHQ--Q 232
Query: 335 SITVRDAISDLPRVSQGANCYLFHNPPKT 363
+ TVRDAISDLP + Y NP +T
Sbjct: 233 TKTVRDAISDLPPL------YPVENPTRT 255
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 521 LAWDESFDTIVTTPNPLNKQG-KILHPE--QDRVLTVREYARAQGFPDSYVFRGGICDMY 577
L WDE +TI P L K G + +HP+ Q R +TVRE AR Q F D ++F + +
Sbjct: 320 LRWDEPSNTI---PAHLKKDGLRHIHPDPSQSRSITVREAARLQTFDDDFMFNESQMNNF 376
Query: 578 KQIGNAVPPPLAKAIGYEIIKCI 600
+ IGNAVPP AK IG EII I
Sbjct: 377 EMIGNAVPPLFAKKIG-EIIPSI 398
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 123 LFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGHT 182
FSGCGGL G +AG S + E + A +Y NF + V++ D + ++
Sbjct: 24 FFSGCGGLDLGFERAGFDVALGSDQWEPA-AKTYRRNFADTEVLEGDVRELDAPTIREAV 82
Query: 183 QHKGVSLPQKHEVDLIVAGPPCQGFSQLNRAR----ELEKSKLKNGLVFTFLSFCDLFQP 238
G VD+++ GPPCQGFS+LN + E+EK + +N L FL + +P
Sbjct: 83 AGAGYD---PDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDR-RNTLFEEFLRVVSVLEP 138
Query: 239 KYIILENVTGLVHFNKNE---ILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
+ +++ENV L++ ++ + I Y+ + VL++ YGV Q R R+ +
Sbjct: 139 QLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMG 198
Query: 296 SKPGYKLPSFPQPLHAFSNQLFTINGNLVANKTSHAP 332
+ + FP+P N + G +A+ P
Sbjct: 199 TDRDVPI-RFPEPTTPEGN--WRTAGEALADAGDDLP 232
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%)
Query: 543 ILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGN 602
+HP +DR LT RE AR Q FPD + F G D+ KQIGNAVP L + + ++ + +
Sbjct: 309 FIHPSEDRYLTPREMARLQTFPDEFAFEGTKTDVLKQIGNAVPVRLGEVLATQLREYYPD 368
Query: 603 AVPPPLAKAIGYE 615
P A YE
Sbjct: 369 VRDAPPADPDVYE 381
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 119 KCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQE-----CSVIQDDCNLV 173
K D+F G GGL G + W+ ++++ SY AN +E C ++Q C
Sbjct: 3 KVADIFCGAGGLSYGFSVHPYFELIWANDIDKDAILSYQANHKEAQTILCDIMQLHC--- 59
Query: 174 LKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
H +P +D+++ GPPCQ +S L + + EK+ L +L
Sbjct: 60 ----------HNLPCVP----IDILLGGPPCQSYSTLGKRKMDEKANLFK----EYLRLL 101
Query: 234 DLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
DL +PK + ENV GL+ K ++ + I + + Y + +L + +YGV Q R RV++
Sbjct: 102 DLVKPKMFVFENVVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVIL 161
Query: 294 LASKPGYKLP-SFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGA 352
+ + +K FP+P+ +++DA+ DLP + G
Sbjct: 162 VGALKRFKQKFHFPKPIKT-----------------------HFSLKDALGDLPPIQSGE 198
Query: 353 N 353
N
Sbjct: 199 N 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIV---TTPNPLNKQGKILHPEQDR 550
GQ +P SL + N + ++ W++ TI +TP+ + +HP R
Sbjct: 245 GQSKDDLPESLRPKSGYINTY----AKMWWEKPAPTITRNFSTPS----SSRCIHPRDSR 296
Query: 551 VLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEII 597
L++RE AR Q FPD+Y F G QIGNAVPP L+ A+ +
Sbjct: 297 ALSIREGARLQSFPDNYKFCGSASAKRLQIGNAVPPLLSVALAQAVF 343
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
DLF+G GG+ +G+ QAG+ KP ++ + S S+ AN E VI D + + H
Sbjct: 731 DLFAGAGGMSQGMFQAGL-KPIFANDCFLSACISHKANHPETDVIYGDIS-------EAH 782
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
T+ K K +D++ GPPCQGFSQ + R ++ + N L F+ + PK +
Sbjct: 783 TKQKIYQYANK--IDILCGGPPCQGFSQAGK-RIIDDPR--NQLFLEFIESISVINPKVV 837
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
++ENV G + +K L ++ Y +L + +YGV Q R RV+IL
Sbjct: 838 VMENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVHYGVPQKRKRVIILG 891
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 517 VLGRLAWDESFDTIVTTPN-PLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICD 575
+ GR+ +++ TI T N P N G +HP+ +RV+T RE AR Q FPD+Y F G D
Sbjct: 641 LYGRINYEKPSYTITTYFNRPGN--GTYVHPKLERVITAREAARLQSFPDNYYFYGNKKD 698
Query: 576 MYKQIGNAVPPPLAKAIG 593
+ QIGNAVP A+AIG
Sbjct: 699 VLTQIGNAVPCLFAQAIG 716
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,327,552,271
Number of Sequences: 23463169
Number of extensions: 444324390
Number of successful extensions: 968335
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3518
Number of HSP's successfully gapped in prelim test: 2103
Number of HSP's that attempted gapping in prelim test: 945946
Number of HSP's gapped (non-prelim): 14359
length of query: 620
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 471
effective length of database: 8,863,183,186
effective search space: 4174559280606
effective search space used: 4174559280606
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)