Your job contains 1 sequence.
>psy12304
MKAHVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEIL
DNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPMPLDTPLKC
LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKG
HTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKY
IILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGY
KLPSFPQPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAISDLPRVSQGANCYLFHNP
PKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNIC
VKLPRGQHSYTEKLKYNAKKKKSVCDCKSSSSCTSKGQKNTIIPWSLVHTASRNNNWQGV
LGRLAWDESFDMTGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQ
GKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI
GNAVPPPLAKAIGYEIIKWA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12304
(620 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 795 7.7e-121 3
MGI|MGI:94912 - symbol:Dnmt1 "DNA methyltransferase (cyto... 790 2.1e-120 4
ZFIN|ZDB-GENE-990714-15 - symbol:dnmt1 "DNA (cytosine-5-)... 765 2.9e-120 4
UNIPROTKB|E2RHC6 - symbol:DNMT1 "Cytosine-specific methyl... 799 4.3e-119 4
UNIPROTKB|F1S3I5 - symbol:DNMT1 "Cytosine-specific methyl... 789 2.5e-118 4
UNIPROTKB|Q24K09 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 788 2.5e-118 4
UNIPROTKB|P26358 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 783 8.2e-117 4
UNIPROTKB|F5GX68 - symbol:DNMT1 "Cytosine-specific methyl... 778 2.9e-116 4
UNIPROTKB|D4A8Z6 - symbol:Dnmt1 "Cytosine-specific methyl... 666 5.3e-106 4
RGD|620979 - symbol:Dnmt1 "DNA (cytosine-5-)-methyltransf... 581 1.3e-94 3
UNIPROTKB|Q9Z330 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 581 1.3e-94 3
UNIPROTKB|Q7Y1I7 - symbol:MET1A "DNA (cytosine-5)-methylt... 444 1.2e-87 4
UNIPROTKB|K7ENW7 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 589 2.1e-86 2
TAIR|locus:2122313 - symbol:AT4G08990 species:3702 "Arabi... 457 9.9e-86 4
TAIR|locus:2155959 - symbol:MET1 "methyltransferase 1" sp... 438 1.3e-82 4
TAIR|locus:2140892 - symbol:MEE57 "maternal effect embryo... 428 1.1e-74 4
UNIPROTKB|F1PAS9 - symbol:DNMT1 "Uncharacterized protein"... 419 1.7e-53 2
UNIPROTKB|D4A0P3 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 365 2.9e-46 4
TAIR|locus:2205015 - symbol:CMT3 "chromomethylase 3" spec... 274 1.9e-41 4
TAIR|locus:2117104 - symbol:CMT2 "chromomethylase 2" spec... 276 2.2e-40 3
TAIR|locus:2025787 - symbol:CMT1 "chromomethylase 1" spec... 288 6.1e-39 3
TIGR_CMR|SPO_1049 - symbol:SPO_1049 "DNA methylase, C-5 c... 202 4.3e-33 3
UNIPROTKB|O34939 - symbol:ydiO "Probable BsuMI modificati... 210 2.3e-20 2
UNIPROTKB|Q2KFY7 - symbol:MGCH7_ch7g548 "Putative unchara... 150 2.1e-12 2
UNIPROTKB|O34680 - symbol:ydiP "Probable BsuMI modificati... 146 2.3e-07 2
UNIPROTKB|O14717 - symbol:TRDMT1 "tRNA (cytosine(38)-C(5)... 146 2.9e-07 2
UNIPROTKB|P0AED9 - symbol:dcm "DNA-cytosine methyltransfe... 118 6.9e-07 2
UNIPROTKB|E2RM86 - symbol:TRDMT1 "Uncharacterized protein... 141 8.2e-07 2
MGI|MGI:1274787 - symbol:Trdmt1 "tRNA aspartic acid methy... 125 7.1e-06 2
ZFIN|ZDB-GENE-041008-138 - symbol:trdmt1 "tRNA aspartic a... 110 1.4e-05 2
DICTYBASE|DDB_G0288047 - symbol:dnmA "DNA (cytosine-5-)-m... 121 1.4e-05 2
UNIPROTKB|Q7YS61 - symbol:TRDMT1 "tRNA (cytosine-5-)-meth... 122 2.5e-05 2
UNIPROTKB|F1NJ02 - symbol:TRDMT1 "Uncharacterized protein... 121 2.7e-05 2
RGD|1306292 - symbol:Trdmt1 "tRNA aspartic acid methyltra... 127 2.9e-05 2
TIGR_CMR|BA_3814 - symbol:BA_3814 "prophage LambdaBa01, C... 114 0.00085 1
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 795 (284.9 bits), Expect = 7.7e-121, Sum P(3) = 7.7e-121
Identities = 170/403 (42%), Positives = 238/403 (59%)
Query: 111 PMPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDD 169
P L P L+ LD+FSGCGGL EG QAGV++ W++E+ A ++ N +V +D
Sbjct: 1046 PTELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTED 1105
Query: 170 CNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFT 228
CN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV +
Sbjct: 1106 CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS 1165
Query: 229 FLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSR 288
FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R
Sbjct: 1166 FLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR 1225
Query: 289 NRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVAN--KTSHAPYRSITVRDA 341
R ++LA+ PG KLP FP+PLH F+ QL + + V+N +T P+R+ITVRD
Sbjct: 1226 RRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDT 1285
Query: 342 ISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLME 399
+SDLP + GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+
Sbjct: 1286 MSDLPEIRNGASALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVA 1337
Query: 400 MRIRLIPSFPNADWRDLPNICVKLPRGQHS----YTEKLKYNAXXXXXXXXXXXXXXXX- 454
R+R IP P +DWRDLPNI V+L G + YT K N
Sbjct: 1338 ARMRHIPLAPGSDWRDLPNIEVRLSDGTSTRKLRYTHHEKKNGRSSSGALRGVCSCAEGK 1397
Query: 455 ----XXGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1398 PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1440
Score = 373 (136.4 bits), Expect = 7.7e-121, Sum P(3) = 7.7e-121
Identities = 66/107 (61%), Positives = 82/107 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1405 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1464
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCIG 601
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+G
Sbjct: 1465 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIRACVG 1511
Score = 88 (36.0 bits), Expect = 7.7e-121, Sum P(3) = 7.7e-121
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W +DT+LG D LFL + CE + LS I V V + + + + E LD
Sbjct: 704 HAHWFCPGSDTVLG--ATSDPLELFLVDECEDMQLSYIHGKVNVIYKPPSENWAMEGGLD 761
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE---LAYILKI-----IHSKEFLPK 109
E + ++ T +Y+ D+ + + P A+P+E + L + KE +PK
Sbjct: 762 MEIKMVEDDGRTYFYQMWYDQEYARFETPPRAQPMEDNKYKFCLSCARLDEVRHKE-IPK 820
Query: 110 FPMPLD 115
PLD
Sbjct: 821 VAEPLD 826
Score = 79 (32.9 bits), Expect = 6.4e-90, Sum P(3) = 6.4e-90
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1490 VGNAVPPPLAKAIGLEI 1506
Score = 44 (20.5 bits), Expect = 3.3e-116, Sum P(3) = 3.3e-116
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 65 EEKDETIYTEYYRK 78
E DE +Y E+YRK
Sbjct: 873 EAVDEDLYPEHYRK 886
Score = 44 (20.5 bits), Expect = 3.3e-116, Sum P(3) = 3.3e-116
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 52 NDSSEEEILDNEHEEKDETIYTEYYRKTKDK 82
++ EEE+ + E +EK I T+ + KD+
Sbjct: 216 DEEEEEELEEKEQDEKRIKIETKEGSEIKDE 246
>MGI|MGI:94912 [details] [associations]
symbol:Dnmt1 "DNA methyltransferase (cytosine-5) 1"
species:10090 "Mus musculus" [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005657
"replication fork" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=ISO;IDA] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IMP] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0032259
"methylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=ISO] [GO:0046499 "S-adenosylmethioninamine
metabolic process" evidence=ISO] [GO:0046500 "S-adenosylmethionine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090116 "C-5 methylation of cytosine"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
MGI:MGI:94912 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0003723 GO:GO:0042127 GO:GO:0010628 GO:GO:0005721
GO:GO:0071230 GO:GO:0016458 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702 Pfam:PF12047
BRENDA:2.1.1.37 CTD:1786 GeneTree:ENSGT00390000005100
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
ChiTaRS:DNMT1 EMBL:X14805 EMBL:AF175432 EMBL:AF162282 EMBL:AF175431
EMBL:AF175412 EMBL:AF175413 EMBL:AF175414 EMBL:AF244089
EMBL:AF244090 EMBL:AF175416 EMBL:AF175417 EMBL:AF175418
EMBL:AF175419 EMBL:AF175420 EMBL:AF175421 EMBL:AF175422
EMBL:AF175423 EMBL:AF234317 EMBL:AF175424 EMBL:AF175425
EMBL:AF175426 EMBL:AF234318 EMBL:AF175427 EMBL:AF175428
EMBL:AF175429 EMBL:AF175430 EMBL:BC048148 EMBL:AF036007
EMBL:AF036008 EMBL:U70051 EMBL:AK013247 IPI:IPI00474974
IPI:IPI00990173 PIR:S01845 RefSeq:NP_001186360.2
RefSeq:NP_001186361.1 RefSeq:NP_001186362.1 RefSeq:NP_034196.5
UniGene:Mm.128580 PDB:3AV4 PDB:3AV5 PDB:3AV6 PDB:3PT6 PDB:3PT9
PDB:4DA4 PDBsum:3AV4 PDBsum:3AV5 PDBsum:3AV6 PDBsum:3PT6
PDBsum:3PT9 PDBsum:4DA4 ProteinModelPortal:P13864 SMR:P13864
IntAct:P13864 STRING:P13864 REBASE:2844 PhosphoSite:P13864
PaxDb:P13864 PRIDE:P13864 Ensembl:ENSMUST00000004202
Ensembl:ENSMUST00000178110 GeneID:13433 KEGG:mmu:13433
UCSC:uc009ojo.2 UCSC:uc009ojq.2 InParanoid:P13864
EvolutionaryTrace:P13864 NextBio:283859 Bgee:P13864
CleanEx:MM_DNMT1 Genevestigator:P13864
GermOnline:ENSMUSG00000004099 Uniprot:P13864
Length = 1620
Score = 790 (283.2 bits), Expect = 2.1e-120, Sum P(4) = 2.1e-120
Identities = 173/407 (42%), Positives = 245/407 (60%)
Query: 108 PKFP-MPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
PK P + P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1130 PKEPEAAIKLPKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTV 1189
Query: 166 IQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN
Sbjct: 1190 FTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS 1249
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
LV +FLS+CD ++P++ +LENV V + ++ +L+ CL++M YQ TF VLQ+G YGV
Sbjct: 1250 LVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGV 1309
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSIT 337
AQ+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+IT
Sbjct: 1310 AQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTIT 1369
Query: 338 VRDAISDLPRVSQGA-NCYLFHN-PPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILS 395
VRD +SDLP + GA N + +N P + FQR ++ GS I L+DHICK +S
Sbjct: 1370 VRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLR-GSHYQPI-------LRDHICKDMS 1421
Query: 396 PLMEMRIRLIPSFPNADWRDLPNICVKLPRG------QHSYTE-KLKYNAXXXXXXXXXX 448
PL+ R+R IP FP +DWRDLPNI V+L G Q+++ + K Y++
Sbjct: 1422 PLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSC 1481
Query: 449 XXXXXXX--XGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q +T+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1482 AEGKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1528
Score = 369 (135.0 bits), Expect = 2.1e-120, Sum P(4) = 2.1e-120
Identities = 66/106 (62%), Positives = 82/106 (77%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q +T+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1493 QFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1552
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPDSY F G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1553 RECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1598
Score = 79 (32.9 bits), Expect = 5.2e-90, Sum P(4) = 5.2e-90
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1578 VGNAVPPPLAKAIGLEI 1594
Score = 70 (29.7 bits), Expect = 2.1e-120, Sum P(4) = 2.1e-120
Identities = 18/47 (38%), Positives = 21/47 (44%)
Query: 1 MKAHVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
M H W DT+LG D LFL CE++ LS I V V
Sbjct: 793 MMFHAHWFCAGTDTVLG--ATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 57 (25.1 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 53 DSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPM 112
++ E++ E++DE E RKT K ++ + P++ K SK +PK
Sbjct: 298 EAEPEQVAPETPEDRDEDEREEKRRKTTRKK-LESHTVPVQSRSERKAAQSKSVIPKINS 356
Query: 113 P 113
P
Sbjct: 357 P 357
Score = 47 (21.6 bits), Expect = 2.1e-120, Sum P(4) = 2.1e-120
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 68 DETIYTEYYRKTKD 81
+ET+Y E+YRK D
Sbjct: 969 NETLYPEHYRKYSD 982
Score = 41 (19.5 bits), Expect = 2.4e-117, Sum P(4) = 2.4e-117
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 KAHVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
K + WL +P KI+ +N T + SID +++ CV + +DSS+
Sbjct: 731 KDRISWLGQPM------KIE-ENRTYYQK---VSIDEEMLEVGDCVSVIPDDSSK 775
Score = 41 (19.5 bits), Expect = 1.0e-114, Sum P(3) = 1.0e-114
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 61 DNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELA 95
D + E + ET E KDK +P ++P + A
Sbjct: 257 DPDREARPETHLDEDEDGKKDKRSSRPRSQPRDPA 291
>ZFIN|ZDB-GENE-990714-15 [details] [associations]
symbol:dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA;IMP] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0035622 "intrahepatic
bile duct development" evidence=IMP] [GO:0044030 "regulation of DNA
methylation" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0002088 "lens development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
ZFIN:ZDB-GENE-990714-15 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0051216 GO:GO:0051567 GO:GO:0010842 GO:GO:0048565
GO:GO:0044030 GO:GO:0032776 GO:GO:0002088 GO:GO:0031017
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0035622
EMBL:CU571160 IPI:IPI00486841 Ensembl:ENSDART00000021977
ArrayExpress:F1RCN0 Bgee:F1RCN0 Uniprot:F1RCN0
Length = 1500
Score = 765 (274.4 bits), Expect = 2.9e-120, Sum P(4) = 2.9e-120
Identities = 165/402 (41%), Positives = 238/402 (59%)
Query: 113 PLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNL 172
P+ L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN+
Sbjct: 1018 PVVPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNV 1077
Query: 173 VLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLS 231
+LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN LV ++LS
Sbjct: 1078 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLS 1137
Query: 232 FCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+CD ++PK+ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R
Sbjct: 1138 YCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRA 1197
Query: 292 VILASKPGYKLPSFPQPLHAFSNQLFTIN-----GNLVANKT--SHAPYRSITVRDAISD 344
+ILA+ PG KLP +P+PLH F+ + +++ V+N T + YR+ITVRD +SD
Sbjct: 1198 IILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSD 1257
Query: 345 LPRVSQGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRI 402
LP + GA ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+
Sbjct: 1258 LPEIRNGAAALEISYNGEPQSWFQRQIR-GSQYQPI-------LRDHICKDMSALVAARM 1309
Query: 403 RLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY---NAXXXXXXXXXXXXXXXXXXG-- 457
R IP P +DWRDLPN V+L G + T+KL+Y + G
Sbjct: 1310 RNIPLAPGSDWRDLPNFEVRLRDG--TTTKKLRYTHPDKKNGRSGTGALRGVCSCSEGKP 1367
Query: 458 ------QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1368 CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1409
Score = 374 (136.7 bits), Expect = 2.9e-120, Sum P(4) = 2.9e-120
Identities = 64/106 (60%), Positives = 83/106 (78%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1374 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1433
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y F G + D ++Q+GNAVPPPL+KAIG E+ KC+
Sbjct: 1434 RECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEVKKCV 1479
Score = 77 (32.2 bits), Expect = 3.7e-89, Sum P(4) = 3.7e-89
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 600 IGNAVPPPLAKAIGYEIIK 618
+GNAVPPPL+KAIG E+ K
Sbjct: 1459 VGNAVPPPLSKAIGLEVKK 1477
Score = 76 (31.8 bits), Expect = 2.9e-120, Sum P(4) = 2.9e-120
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
H W R DT+LG+ D LFL + CE + LS I V V
Sbjct: 671 HAHWFCRGTDTVLGESS--DPLELFLVDECEDMQLSFIHGKVNV 712
Score = 57 (25.1 bits), Expect = 2.9e-120, Sum P(4) = 2.9e-120
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 48 DFVTNDSSEEEILDNEHEEKDETIYTEYYRKTKD 81
+FV +S + + ++ DE +Y EYYRK+ D
Sbjct: 827 NFVVKAASPVK-RSHRKDDVDEDLYPEYYRKSSD 859
>UNIPROTKB|E2RHC6 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9615 "Canis lupus familiaris" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 EMBL:AAEX03012427 EMBL:AAEX03012426
Ensembl:ENSCAFT00000028398 Uniprot:E2RHC6
Length = 1613
Score = 799 (286.3 bits), Expect = 4.3e-119, Sum P(4) = 4.3e-119
Identities = 171/396 (43%), Positives = 237/396 (59%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1138 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1197
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1198 MAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1257
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1258 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1317
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1318 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1377
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ L++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1378 NGASALEILYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1429
Query: 408 FPNADWRDLPNICVKLPRGQHS----YTEKLKYNAXXXXXXXXX------XXXXXXXXXG 457
P +DWRDLPNI V+L G + YT K N
Sbjct: 1430 APGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAAR 1489
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1490 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1525
Score = 368 (134.6 bits), Expect = 4.3e-119, Sum P(4) = 4.3e-119
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1490 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1549
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI +C+
Sbjct: 1550 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKRCM 1595
Score = 79 (32.9 bits), Expect = 1.8e-88, Sum P(3) = 1.8e-88
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1575 VGNAVPPPLAKAIGLEI 1591
Score = 72 (30.4 bits), Expect = 7.3e-119, Sum P(3) = 7.3e-119
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W DT+LG D LFL + CE + LS I V V + + + + E +D
Sbjct: 792 HAHWFCAGTDTVLG--ATSDPLELFLVDECEDMQLSYIHSKVKVVYKAPSENWALEGGMD 849
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE 93
E ++ T +Y+ D+ + + P +P E
Sbjct: 850 PEALITEDDGKTYFYQLWYDQDYARFESPPKTQPTE 885
Score = 49 (22.3 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 53 DSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSK 104
+ E + EEKDE E RKT K +PN + ++A ++ SK
Sbjct: 299 EKEPERVKPQVSEEKDEDEKEEKRRKTTSK---EPNEK--KMARTKTVVSSK 345
Score = 48 (22.0 bits), Expect = 4.3e-119, Sum P(4) = 4.3e-119
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 65 EEKDETIYTEYYRKTKD 81
E DE +Y E+YRK D
Sbjct: 961 EPVDEDLYPEHYRKYSD 977
Score = 48 (22.0 bits), Expect = 4.3e-119, Sum P(4) = 4.3e-119
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
+GD ++ D + C ID ++ CV + +DSS+
Sbjct: 731 VGDAVKTDGKKDYYKKVC--IDSETLEVGDCVSVIPDDSSK 769
>UNIPROTKB|F1S3I5 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9823 "Sus scrofa" [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0008270 GO:GO:0003723
GO:GO:0042127 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 GO:GO:0005657 GO:GO:0051573 GO:GO:0051571
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0008327
EMBL:CU462940 Ensembl:ENSSSCT00000014923 Uniprot:F1S3I5
Length = 1611
Score = 789 (282.8 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 169/398 (42%), Positives = 238/398 (59%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1135 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1194
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1195 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1254
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1255 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1314
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG +LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1315 APGEQLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1374
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1375 NGASAQEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1426
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYN------------AXXXXXXXXXXXXXXXXX 455
P +DWRDLPNI V+L G + KL+YN A
Sbjct: 1427 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGCSSTGALRGVCSCVEVGKACDPA 1484
Query: 456 XGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1485 ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1522
Score = 368 (134.6 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1487 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1546
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI +C+
Sbjct: 1547 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKRCM 1592
Score = 79 (32.9 bits), Expect = 4.4e-87, Sum P(3) = 4.4e-87
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1572 VGNAVPPPLAKAIGLEI 1588
Score = 69 (29.3 bits), Expect = 1.8e-117, Sum P(3) = 1.8e-117
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W DT+LG D LFL + CE + LS I V V + + + + E +D
Sbjct: 789 HAHWFCAGIDTVLG--ATSDPLELFLVDECEDMQLSYIHSKVKVIYKPPSENWALEGGMD 846
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE 93
E + T +Y+ D+ + + P +P E
Sbjct: 847 PEALMSKDDGKTYFYQLWYDQEYARFESPPKTQPTE 882
Score = 51 (23.0 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
+G+ ++ D ++ C ID ++ CV + +DSS+
Sbjct: 730 IGEAVKTDGKKIYYKKVC--IDSETLEVGDCVSVIPDDSSK 768
Score = 48 (22.0 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 65 EEKDETIYTEYYRKTKD 81
E DE +Y E+YRK D
Sbjct: 958 EPVDEDLYPEHYRKYSD 974
>UNIPROTKB|Q24K09 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9913 "Bos taurus" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0010628 GO:GO:0005721 GO:GO:0071230 GO:GO:0016458
GO:GO:0005657 GO:GO:0051573 GO:GO:0051571 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 EMBL:AY244709 EMBL:AY173048 EMBL:BC114063
IPI:IPI00711805 RefSeq:NP_872592.2 UniGene:Bt.108052
UniGene:Bt.48560 ProteinModelPortal:Q24K09 STRING:Q24K09
REBASE:7406 PRIDE:Q24K09 Ensembl:ENSBTAT00000003549 GeneID:281119
KEGG:bta:281119 CTD:1786 GeneTree:ENSGT00390000005100
HOGENOM:HOG000082497 HOVERGEN:HBG051384 InParanoid:Q24K09
OMA:SENWAME OrthoDB:EOG4T1HKN NextBio:20805188 GO:GO:0008327
Uniprot:Q24K09
Length = 1611
Score = 788 (282.4 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 168/397 (42%), Positives = 236/397 (59%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
Query: 178 LKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1196 MAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1255
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P+Y +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1256 RPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1315
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG LP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP +
Sbjct: 1316 APGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIR 1375
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ GS+ I L+DHICK +S L+ R+R IP
Sbjct: 1376 NGASALEISYNGEPQSWFQRQLR-GSQYQPI-------LRDHICKDMSALVAARMRHIPL 1427
Query: 408 FPNADWRDLPNICVKLPRGQHSYTEKLKYNAXXXXXXXXXXXXXXXX-----------XX 456
P +DWRDLPNI V+L G + KL+YN
Sbjct: 1428 APGSDWRDLPNIEVRLSDG--TLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEPAA 1485
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1486 RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1522
Score = 368 (134.6 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1487 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1546
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI +C+
Sbjct: 1547 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKRCM 1592
Score = 79 (32.9 bits), Expect = 1.7e-87, Sum P(3) = 1.7e-87
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1572 VGNAVPPPLAKAIGLEI 1588
Score = 74 (31.1 bits), Expect = 6.9e-118, Sum P(3) = 6.9e-118
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W DT+LG D LFL + CE + LS I V V + + + + E +D
Sbjct: 790 HAHWFCAGTDTVLG--ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGVD 847
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE 93
E ++ T +Y+ D+ + + P +P E
Sbjct: 848 PEALMSEDDGKTYFYQLWYDQDYARFESPPKTQPTE 883
Score = 50 (22.7 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
+GD ++ D + C ID ++ CV + +DSS+
Sbjct: 731 VGDAVKTDGKKSYYKKVC--IDSETLEVGDCVSVIPDDSSK 769
Score = 50 (22.7 bits), Expect = 2.5e-118, Sum P(4) = 2.5e-118
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 65 EEKDETIYTEYYRKTKD--KHFVQPNARPLELAYILKIIHSKE 105
E DE +Y E+YRK D K P + I +I SK+
Sbjct: 959 EPVDEALYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCSKK 1001
Score = 38 (18.4 bits), Expect = 4.3e-114, Sum P(3) = 4.3e-114
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 53 DSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILK 99
+ E + +EKDE E R+T + + ++A + K
Sbjct: 299 EKEPERVKPQVSDEKDEDEKEEKRRRTTYRELTEKKMTRTKIAVVSK 345
>UNIPROTKB|P26358 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005657 "replication
fork" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008327 "methyl-CpG binding" evidence=IEA] [GO:0016458 "gene
silencing" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0009008 "DNA-methyltransferase activity" evidence=IDA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006306 "DNA
methylation" evidence=TAS] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0000122 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 Orphanet:36386 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 EMBL:AC020931 DrugBank:DB00928 DrugBank:DB01035
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
DrugBank:DB01181 GO:GO:0010216 DrugBank:DB01262 InterPro:IPR022702
Pfam:PF12047 BRENDA:2.1.1.37 CTD:1786 HOGENOM:HOG000082497
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
EMBL:X63692 EMBL:AF180682 EMBL:AC010077 EMBL:AC011511 EMBL:BC126227
EMBL:BC144093 EMBL:AH008119 IPI:IPI00031519 IPI:IPI00220918
IPI:IPI00220919 PIR:S22610 RefSeq:NP_001124295.1 RefSeq:NP_001370.1
UniGene:Hs.202672 PDB:3EPZ PDB:3PTA PDB:3SWR PDBsum:3EPZ
PDBsum:3PTA PDBsum:3SWR ProteinModelPortal:P26358 SMR:P26358
DIP:DIP-39693N IntAct:P26358 MINT:MINT-232346 STRING:P26358
REBASE:1161 PhosphoSite:P26358 DMDM:12231019 PaxDb:P26358
PRIDE:P26358 Ensembl:ENST00000340748 Ensembl:ENST00000359526
GeneID:1786 KEGG:hsa:1786 UCSC:uc002mng.3 UCSC:uc002mnh.3
GeneCards:GC19M010244 HGNC:HGNC:2976 HPA:CAB005876 HPA:HPA002694
MIM:126375 MIM:614116 neXtProt:NX_P26358 PharmGKB:PA27443
BindingDB:P26358 ChEMBL:CHEMBL1993 ChiTaRS:DNMT1 DrugBank:DB01099
EvolutionaryTrace:P26358 GenomeRNAi:1786 NextBio:7267
ArrayExpress:P26358 Bgee:P26358 CleanEx:HS_DNMT1
Genevestigator:P26358 GermOnline:ENSG00000130816 Uniprot:P26358
Length = 1616
Score = 783 (280.7 bits), Expect = 8.2e-117, Sum P(4) = 8.2e-117
Identities = 167/396 (42%), Positives = 236/396 (59%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHS----YTEKLKYNAXXXXXXXXXXXXXXXXXXG------ 457
P +DWRDLPNI V+L G + YT + N
Sbjct: 1431 APGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAAR 1490
Query: 458 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1491 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1526
Score = 364 (133.2 bits), Expect = 8.2e-117, Sum P(4) = 8.2e-117
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1491 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1550
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1551 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCM 1596
Score = 79 (32.9 bits), Expect = 7.7e-87, Sum P(3) = 7.7e-87
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1576 VGNAVPPPLAKAIGLEI 1592
Score = 73 (30.8 bits), Expect = 8.3e-117, Sum P(3) = 8.3e-117
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W DT+LG D LFL + CE + LS I V V + + + + E +D
Sbjct: 793 HAHWFCAGTDTVLG--ATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMD 850
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE 93
E + + T +Y+ D+ + + P +P E
Sbjct: 851 PESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTE 886
Score = 48 (22.0 bits), Expect = 8.2e-117, Sum P(4) = 8.2e-117
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 65 EEKDETIYTEYYRKTKD 81
E DE +Y E+YRK D
Sbjct: 962 EPVDEDLYPEHYRKYSD 978
Score = 47 (21.6 bits), Expect = 8.2e-117, Sum P(4) = 8.2e-117
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
+G+ ++ D + C ID ++ CV + +DSS+
Sbjct: 734 VGEAVKTDGKKSYYKKVC--IDAETLEVGDCVSVIPDDSSK 772
Score = 45 (20.9 bits), Expect = 7.4e-114, Sum P(3) = 7.4e-114
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 53 DSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPK 109
+ E++ +EKDE E RKT K +P + ++A +++SK PK
Sbjct: 301 EKEPEKVNPQISDEKDEDEKEEKRRKTTPK---EPTEK--KMARAKTVMNSKTHPPK 352
>UNIPROTKB|F5GX68 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 EMBL:AC020931
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 ChiTaRS:DNMT1
IPI:IPI01011182 ProteinModelPortal:F5GX68 SMR:F5GX68 PRIDE:F5GX68
Ensembl:ENST00000540357 UCSC:uc010xld.2 ArrayExpress:F5GX68
Bgee:F5GX68 Uniprot:F5GX68
Length = 1619
Score = 778 (278.9 bits), Expect = 2.9e-116, Sum P(4) = 2.9e-116
Identities = 167/399 (41%), Positives = 236/399 (59%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ LD+FSGCGGL EG QAG++ W++E+ A ++ N +V +DCN++LK +
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLV 1198
Query: 178 LKGHTQH-KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ G T + +G LPQK +V+++ GPPCQGFS +NR SK KN LV +FLS+CD +
Sbjct: 1199 MAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1258
Query: 237 QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILAS 296
+P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGVAQ+R R +ILA+
Sbjct: 1259 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 1318
Query: 297 KPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSITVRDAISDLPRVS 349
PG KLP FP+PLH F+ QL + + V+N T S P+R+ITVRD +SDLP V
Sbjct: 1319 APGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVR 1378
Query: 350 QGANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPS 407
GA+ ++ P++ FQR ++ G++ I L+DHICK +S L+ R+R IP
Sbjct: 1379 NGASALEISYNGEPQSWFQRQLR-GAQYQPI-------LRDHICKDMSALVAARMRHIPL 1430
Query: 408 FPNADWRDLPNICVKLPRGQHS----YTEKLKYNAXXXXXXXXXXXXXXXXXXGQK---- 459
P +DWRDLPNI V+L G + YT + N K
Sbjct: 1431 APGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKACDP 1490
Query: 460 -----NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1491 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1529
Score = 364 (133.2 bits), Expect = 2.9e-116, Sum P(4) = 2.9e-116
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1494 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1553
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1554 RECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCM 1599
Score = 79 (32.9 bits), Expect = 2.7e-86, Sum P(3) = 2.7e-86
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1579 VGNAVPPPLAKAIGLEI 1595
Score = 73 (30.8 bits), Expect = 3.0e-116, Sum P(3) = 3.0e-116
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFV--TNDSSEEEILD 61
H W DT+LG D LFL + CE + LS I V V + + + + E +D
Sbjct: 793 HAHWFCAGTDTVLG--ATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMD 850
Query: 62 NEHEEKDETIYTEYYRKTKDKHFVQ----PNARPLE 93
E + + T +Y+ D+ + + P +P E
Sbjct: 851 PESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTE 886
Score = 48 (22.0 bits), Expect = 2.9e-116, Sum P(4) = 2.9e-116
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 65 EEKDETIYTEYYRKTKD 81
E DE +Y E+YRK D
Sbjct: 962 EPVDEDLYPEHYRKYSD 978
Score = 47 (21.6 bits), Expect = 2.9e-116, Sum P(4) = 2.9e-116
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 16 LGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSE 56
+G+ ++ D + C ID ++ CV + +DSS+
Sbjct: 734 VGEAVKTDGKKSYYKKVC--IDAETLEVGDCVSVIPDDSSK 772
Score = 45 (20.9 bits), Expect = 2.6e-113, Sum P(3) = 2.6e-113
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 53 DSSEEEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPK 109
+ E++ +EKDE E RKT K +P + ++A +++SK PK
Sbjct: 301 EKEPEKVNPQISDEKDEDEKEEKRRKTTPK---EPTEK--KMARAKTVMNSKTHPPK 352
>UNIPROTKB|D4A8Z6 [details] [associations]
symbol:Dnmt1 "Cytosine-specific methyltransferase"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
IPI:IPI00327802 ProteinModelPortal:D4A8Z6
Ensembl:ENSRNOT00000061192 ArrayExpress:D4A8Z6 Uniprot:D4A8Z6
Length = 1616
Score = 666 (239.5 bits), Expect = 5.3e-106, Sum P(4) = 5.3e-106
Identities = 159/409 (38%), Positives = 225/409 (55%)
Query: 108 PKFP-MPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
PK P + P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1126 PKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTV 1185
Query: 166 IQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN
Sbjct: 1186 FTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS 1245
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
LV +FLS D + + I++ ++ + C + V+ +LQ+G YGV
Sbjct: 1246 LVVSFLSLRDREESEDIVMGSIPRESGWQGPMQTSMHMRCCFPVWLSVSLPLLQAGQYGV 1305
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSIT 337
AQ+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+IT
Sbjct: 1306 AQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTIT 1365
Query: 338 VRDAISDLPRVSQGANC--YLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILS 395
VRD +SDLP + GA+ ++ P++ FQR ++ GS I L+DHICK +S
Sbjct: 1366 VRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLR-GSHYQPI-------LRDHICKDMS 1417
Query: 396 PLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY---NAXXXXXXXXXXXXXX 452
L+ R+R IP P +DWRDLPNI V+L G T KL+Y +
Sbjct: 1418 ALVAARMRHIPLSPGSDWRDLPNIQVRLRDGV--ITNKLRYTFHDTKNGCSSTGALRGVC 1475
Query: 453 XXXXG--------QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
G Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1476 SCAEGKTCDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1524
Score = 365 (133.5 bits), Expect = 5.3e-106, Sum P(4) = 5.3e-106
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1489 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1548
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1549 RECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1594
Score = 79 (32.9 bits), Expect = 4.4e-76, Sum P(4) = 4.4e-76
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1574 VGNAVPPPLAKAIGLEI 1590
Score = 68 (29.0 bits), Expect = 5.3e-106, Sum P(4) = 5.3e-106
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
H W DT+LG D LFL CE++ LS I V V
Sbjct: 792 HAHWFCAGTDTVLG--ATSDPLELFLVGECENMQLSYIHSKVKV 833
Score = 44 (20.5 bits), Expect = 5.3e-106, Sum P(4) = 5.3e-106
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 49 FVTNDSSEEEILDNEHEEKDETIYTEYYRKTKD 81
F N + ++ + +E +Y E+YRK D
Sbjct: 946 FTFNIKMASPMKRSKRDPVNENLYPEHYRKYSD 978
Score = 43 (20.2 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 357 FHNPPKTHFQRMMKDGSRIHDIH-INLRELLQDHICKILSPLMEM 400
F +PPKT + +D + I L EL Q + K+L L E+
Sbjct: 876 FESPPKT---QPTEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEV 917
Score = 38 (18.4 bits), Expect = 1.4e-100, Sum P(3) = 1.4e-100
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 57 EEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLE 93
E+I E KDE E RKT K +P + P++
Sbjct: 299 EQITPEPPEGKDEDEREEKRRKTTRKK-PEPLSIPVQ 334
Score = 38 (18.4 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 103 SKE-FLPKFPMPLDTPLKCLDLFSGCGGLMEGL--CQAGVAKPCWSVELERS 151
S+E +L K L+ L CL+ +G L + C A ++P W E+ S
Sbjct: 74 SEEGYLAKVKTLLNKDL-CLE--NGTLSLTQKANGCPANGSRPTWKAEMADS 122
Score = 37 (18.1 bits), Expect = 1.7e-100, Sum P(3) = 1.7e-100
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 80 KDKHFVQPNARPLELA 95
KDK +P ++P +LA
Sbjct: 274 KDKRSSRPRSQPRDLA 289
>RGD|620979 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0000792 "heterochromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=ISO] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IGI;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005657
"replication fork" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006306 "DNA methylation"
evidence=ISO;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008327 "methyl-CpG binding" evidence=ISO;IDA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IDA] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043234
"protein complex" evidence=IDA] [GO:0045322 "unmethylated CpG
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046498
"S-adenosylhomocysteine metabolic process" evidence=IDA]
[GO:0046499 "S-adenosylmethioninamine metabolic process"
evidence=IDA] [GO:0046500 "S-adenosylmethionine metabolic process"
evidence=IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=ISO] [GO:0090116 "C-5 methylation of cytosine"
evidence=ISO] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
RGD:620979 GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 581 (209.6 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 116/256 (45%), Positives = 166/256 (64%)
Query: 108 PKFP-MPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
PK P + P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1132 PKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTV 1191
Query: 166 IQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN
Sbjct: 1192 FTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS 1251
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
LV +FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGV
Sbjct: 1252 LVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGV 1311
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSIT 337
AQ+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+IT
Sbjct: 1312 AQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTIT 1371
Query: 338 VRDAISDLPRVSQGAN 353
+RD +SDLP + GA+
Sbjct: 1372 MRDTMSDLPEIQNGAS 1387
Score = 365 (133.5 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1495 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1554
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1555 RECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1600
Score = 164 (62.8 bits), Expect = 1.8e-79, Sum P(4) = 1.8e-79
Identities = 41/104 (39%), Positives = 51/104 (49%)
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY---NAXXXXXXXXXXXXXXXXXXG 457
R+R IP P +DWRDLPNI V+L G T KL+Y + G
Sbjct: 1429 RMRHIPLSPGSDWRDLPNIQVRLRDGV--ITNKLRYTFHDTKNGCSSTGALRGVCSCAEG 1486
Query: 458 --------QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1487 KTCDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1530
Score = 79 (32.9 bits), Expect = 1.8e-79, Sum P(4) = 1.8e-79
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1580 VGNAVPPPLAKAIGLEI 1596
Score = 68 (29.0 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
H W DT+LG D LFL CE++ LS I V V
Sbjct: 796 HAHWFCAGTDTVLG--ATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 43 (20.2 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 357 FHNPPKTHFQRMMKDGSRIHDIH-INLRELLQDHICKILSPLMEM 400
F +PPKT + +D + I L EL Q + K+L L E+
Sbjct: 880 FESPPKT---QPAEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEV 921
Score = 42 (19.8 bits), Expect = 7.0e-92, Sum P(3) = 7.0e-92
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 57 EEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSK-EFLPKFPMP 113
E+I E KDE E RKT K +P + P++ K K +PK P
Sbjct: 301 EQITPEPPEGKDEDEREEKRRKTTRKK-PEPLSIPVQSRVERKASQGKASAIPKLNPP 357
Score = 41 (19.5 bits), Expect = 9.9e-32, Sum P(3) = 9.9e-32
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 122 DLFSGCG--GLMEGLCQAGVAKPC 143
D +GC G + G+C K C
Sbjct: 1466 DTKNGCSSTGALRGVCSCAEGKTC 1489
Score = 38 (18.4 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 103 SKE-FLPKFPMPLDTPLKCLDLFSGCGGLMEGL--CQAGVAKPCWSVELERS 151
S+E +L K L+ L CL+ +G L + C A ++P W E+ S
Sbjct: 74 SEEGYLAKVKTLLNKDL-CLE--NGTLSLTQKANGCPANGSRPTWKAEMADS 122
Score = 37 (18.1 bits), Expect = 2.4e-91, Sum P(3) = 2.4e-91
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 80 KDKHFVQPNARPLELA 95
KDK +P ++P +LA
Sbjct: 276 KDKRSSRPRSQPRDLA 291
>UNIPROTKB|Q9Z330 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR002857
InterPro:IPR010506 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 Pfam:PF02008 Pfam:PF06464
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 RGD:620979
GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 581 (209.6 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 116/256 (45%), Positives = 166/256 (64%)
Query: 108 PKFP-MPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
PK P + P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1132 PKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTV 1191
Query: 166 IQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
+DCN++LK ++ G T G LPQK +V+++ GPPCQGFS +NR SK KN
Sbjct: 1192 FTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS 1251
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
LV +FLS+CD ++P++ +LENV V F ++ +L+ CL++M YQ TF VLQ+G YGV
Sbjct: 1252 LVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGV 1311
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI--NGNLVANKT--SHAPYRSIT 337
AQ+R R +ILA+ PG KLP FP+PLH F+ QL + + V+N T S P+R+IT
Sbjct: 1312 AQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTIT 1371
Query: 338 VRDAISDLPRVSQGAN 353
+RD +SDLP + GA+
Sbjct: 1372 MRDTMSDLPEIQNGAS 1387
Score = 365 (133.5 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1495 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1554
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1555 RECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1600
Score = 164 (62.8 bits), Expect = 1.8e-79, Sum P(4) = 1.8e-79
Identities = 41/104 (39%), Positives = 51/104 (49%)
Query: 401 RIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLKY---NAXXXXXXXXXXXXXXXXXXG 457
R+R IP P +DWRDLPNI V+L G T KL+Y + G
Sbjct: 1429 RMRHIPLSPGSDWRDLPNIQVRLRDGV--ITNKLRYTFHDTKNGCSSTGALRGVCSCAEG 1486
Query: 458 --------QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDMT 493
Q NT+IPW L HT +R+N+W G+ GRL WD F T
Sbjct: 1487 KTCDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTT 1530
Score = 79 (32.9 bits), Expect = 1.8e-79, Sum P(4) = 1.8e-79
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1580 VGNAVPPPLAKAIGLEI 1596
Score = 68 (29.0 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
H W DT+LG D LFL CE++ LS I V V
Sbjct: 796 HAHWFCAGTDTVLG--ATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 43 (20.2 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 357 FHNPPKTHFQRMMKDGSRIHDIH-INLRELLQDHICKILSPLMEM 400
F +PPKT + +D + I L EL Q + K+L L E+
Sbjct: 880 FESPPKT---QPAEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEV 921
Score = 42 (19.8 bits), Expect = 7.0e-92, Sum P(3) = 7.0e-92
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 57 EEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSK-EFLPKFPMP 113
E+I E KDE E RKT K +P + P++ K K +PK P
Sbjct: 301 EQITPEPPEGKDEDEREEKRRKTTRKK-PEPLSIPVQSRVERKASQGKASAIPKLNPP 357
Score = 41 (19.5 bits), Expect = 9.9e-32, Sum P(3) = 9.9e-32
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 122 DLFSGCG--GLMEGLCQAGVAKPC 143
D +GC G + G+C K C
Sbjct: 1466 DTKNGCSSTGALRGVCSCAEGKTC 1489
Score = 38 (18.4 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 103 SKE-FLPKFPMPLDTPLKCLDLFSGCGGLMEGL--CQAGVAKPCWSVELERS 151
S+E +L K L+ L CL+ +G L + C A ++P W E+ S
Sbjct: 74 SEEGYLAKVKTLLNKDL-CLE--NGTLSLTQKANGCPANGSRPTWKAEMADS 122
Score = 37 (18.1 bits), Expect = 2.4e-91, Sum P(3) = 2.4e-91
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 80 KDKHFVQPNARPLELA 95
KDK +P ++P +LA
Sbjct: 276 KDKRSSRPRSQPRDLA 291
>UNIPROTKB|Q7Y1I7 [details] [associations]
symbol:MET1A "DNA (cytosine-5)-methyltransferase 1A"
species:39947 "Oryza sativa Japonica Group" [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0010424 "DNA
methylation on cytosine within a CG sequence" evidence=ISS]
[GO:0016458 "gene silencing" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0016458 EMBL:CM000140
eggNOG:COG0270 GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0010216 EMBL:AF462029 EMBL:AB362510 EMBL:AC093713
EMBL:AK108034 ProteinModelPortal:Q7Y1I7 STRING:Q7Y1I7 REBASE:7658
Gramene:Q7Y1I7 GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047
Uniprot:Q7Y1I7
Length = 1527
Score = 444 (161.4 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 105/270 (38%), Positives = 151/270 (55%)
Query: 168 DDCNLVLKSLLKGH--TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGL 225
DDC ++ + ++ K +LP EV+ I GPPCQGFS +NR + SK++ +
Sbjct: 1159 DDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEM 1218
Query: 226 VFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVA 285
+ FLSF + F+P++ +LENV V FNK + + LL+M YQV F +L++G YGVA
Sbjct: 1219 ILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVA 1278
Query: 286 QSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NGNLVA---NKTSHAPYRSITVR 339
QSR R I A+ PG LP +P+P+H F++ I +G A + + AP+RSITVR
Sbjct: 1279 QSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVR 1338
Query: 340 DAISDLPRVSQGAN--CYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPL 397
D I DLP V GA + + P + FQ+ ++ D+ L DHI K ++ L
Sbjct: 1339 DTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRS-----DM-----ASLNDHISKEMNEL 1388
Query: 398 MEMRIRLIPSFPNADWRDLPNICVKLPRGQ 427
+R + IP P DW DLP+ VKL GQ
Sbjct: 1389 NLIRCKHIPKRPGCDWHDLPDEKVKLSTGQ 1418
Score = 335 (123.0 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 63/115 (54%), Positives = 82/115 (71%)
Query: 487 DESFDM-TGQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
DE + TGQ +IPW L +TA R+N W+G+ GRL W+ +F T VT P P+ K G H
Sbjct: 1409 DEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFH 1468
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
PEQDR++TVRE AR+QGFPDSY F G I + ++QIGNAVPPPLA A+G ++ + I
Sbjct: 1469 PEQDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAI 1523
Score = 137 (53.3 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L LD+F+GCGGL EGL ++G++ W++E E ++ N E +V ++CN++LK++
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 178 L 178
+
Sbjct: 1152 M 1152
Score = 102 (41.0 bits), Expect = 5.7e-68, Sum P(5) = 5.7e-68
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 490
GQ +IPW L +TA R+N W+G+ GRL W+ +F
Sbjct: 1417 GQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNF 1450
Score = 64 (27.6 bits), Expect = 5.7e-68, Sum P(5) = 5.7e-68
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 600 IGNAVPPPLAKAIGYEI 616
IGNAVPPPLA A+G ++
Sbjct: 1503 IGNAVPPPLAYALGRKL 1519
Score = 56 (24.8 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 12 NDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILDNEHEEKDETI 71
+ T+LG+ ++ +FLTN C + S IK+ V V+ + + +N ++ E
Sbjct: 786 SQTVLGNAA--NDREVFLTNDCLEFEASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKA 843
Query: 72 YTEYYRKTKDKHFVQPNARPLELAYILKIIHSKEFLPKFPMPLD 115
E RK K P+E YI K ++ E F +P D
Sbjct: 844 KAEE-RKRK--------GLPVE--YICKSLYWPEKGGFFSLPYD 876
>UNIPROTKB|K7ENW7 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AC020931 PANTHER:PTHR10629
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 Ensembl:ENST00000588913
Uniprot:K7ENW7
Length = 389
Score = 589 (212.4 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 131/309 (42%), Positives = 179/309 (57%)
Query: 204 CQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFH 263
CQGFS +NR SK KN LV +FLS+CD ++P++ +LENV V F ++ +L+
Sbjct: 2 CQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLR 61
Query: 264 CLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSN---QLFTI- 319
CL++M YQ TF VLQ+G YGVAQ+R R +ILA+ PG KLP FP+PLH F+ QL +
Sbjct: 62 CLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVV 121
Query: 320 -NGNLVANKT--SHAPYRSITVRDAISDLPRVSQGANCY--LFHNPPKTHFQRMMKDGSR 374
+ V+N T S P+R+ITVRD +SDLP V GA+ ++ P++ FQR ++ G++
Sbjct: 122 DDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLR-GAQ 180
Query: 375 IHDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHS----Y 430
I L+DHICK +S L+ R+R IP P +DWRDLPNI V+L G + Y
Sbjct: 181 YQPI-------LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRY 233
Query: 431 TEKLKYNAXXXXXXXXXXXXXXXXXXG------QKNTIIPWSLVHTASRNNNWQGVLGRL 484
T + N Q NT+IPW L HT +R+N+W G+ GRL
Sbjct: 234 THHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRL 293
Query: 485 AWDESFDMT 493
WD F T
Sbjct: 294 EWDGFFSTT 302
Score = 294 (108.6 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 51/91 (56%), Positives = 66/91 (72%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 267 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 326
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVP 585
RE AR+QGFPD+Y G I D ++Q+ A P
Sbjct: 327 RECARSQGFPDTYRLFGNILDKHRQVSGAAP 357
>TAIR|locus:2122313 [details] [associations]
symbol:AT4G08990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006306 "DNA
methylation" evidence=IEA;ISS] [GO:0090116 "C-5 methylation of
cytosine" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 SMART:SM00439 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161513
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 IPI:IPI00549079
PIR:G85090 RefSeq:NP_192638.1 UniGene:At.54221 HSSP:P20589
ProteinModelPortal:Q9M0S8 SMR:Q9M0S8 STRING:Q9M0S8 REBASE:2839
PaxDb:Q9M0S8 PRIDE:Q9M0S8 EnsemblPlants:AT4G08990.1 GeneID:826477
KEGG:ath:AT4G08990 TAIR:At4g08990 InParanoid:Q9M0S8 OMA:YRISMER
PhylomeDB:Q9M0S8 ArrayExpress:Q9M0S8 Genevestigator:Q9M0S8
Uniprot:Q9M0S8
Length = 1512
Score = 457 (165.9 bits), Expect = 9.9e-86, Sum P(4) = 9.9e-86
Identities = 112/288 (38%), Positives = 160/288 (55%)
Query: 158 ANFQECSVIQDDCNLVLKS--LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE 215
A ++C + DDC +++ L+ +++ +LP + D I GPPCQGFS +NR +
Sbjct: 1129 AIMEKCGDV-DDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFSGMNRFSD 1187
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
SK++ ++ FLSF D F+PKY +LENV V +NK Q LL++ YQV F
Sbjct: 1188 GSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQVRFG 1247
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTIN---G---NLVANKTS 329
+L++G YGV+Q R RV+I A+ P LP +P+P+H F N I+ G + V N
Sbjct: 1248 ILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLHYDTVRNTKF 1307
Query: 330 HAPYRSITVRDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQ 387
AP+RSITVRD I DLP V G + + P + FQ+ ++ N+ +L
Sbjct: 1308 GAPFRSITVRDTIGDLPLVENGESKINKEYRTTPVSWFQKKIRG---------NM-SVLT 1357
Query: 388 DHICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRGQHSYTEKLK 435
DHICK L+ L +R + IP P ADWRDLP+ V L G EKL+
Sbjct: 1358 DHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNG---LVEKLR 1402
Score = 276 (102.2 bits), Expect = 9.9e-86, Sum P(4) = 9.9e-86
Identities = 53/111 (47%), Positives = 72/111 (64%)
Query: 487 DESFDMT-GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
DE+ ++ G + P +L TA +N W+G+ GRL W + +T P P+ K G H
Sbjct: 1388 DENVTLSNGLVEKLRPLALSKTAKNHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFH 1447
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
PEQDR++TVRE AR+QGFPDSY F G ++QIGNAVPPPLA A+G ++
Sbjct: 1448 PEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPPPLAFALGRKL 1498
Score = 146 (56.5 bits), Expect = 9.9e-86, Sum P(4) = 9.9e-86
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P + L LD+F+GCGGL GL +AGV+ W++E E ++ N E +V D+CN
Sbjct: 1065 VPKEMRLATLDIFAGCGGLSHGLEKAGVSNTKWAIEYEEPAGHAFKQNHPEATVFVDNCN 1124
Query: 172 LVLKSLLK 179
++L+++++
Sbjct: 1125 VILRAIME 1132
Score = 74 (31.1 bits), Expect = 9.9e-86, Sum P(4) = 9.9e-86
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTND-----SSEEE 58
H + L R ++T++G + LFLTN C ++ L IK TV +D + E
Sbjct: 745 HGKLLQRGSETVIGTAA--NERELFLTNECLTVHLKDIKGTVSLDIRSRPWGHQYRKENL 802
Query: 59 ILDN-----EHEEKDETIYTEYYRKT 79
++D E K + TEYY K+
Sbjct: 803 VVDKLDRARAEERKANGLPTEYYCKS 828
Score = 65 (27.9 bits), Expect = 3.0e-68, Sum P(5) = 3.0e-68
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 464 PWSLVHTASRNNNWQGVLGRLAW 486
P +L TA +N W+G+ GRL W
Sbjct: 1403 PLALSKTAKNHNEWKGLYGRLDW 1425
Score = 63 (27.2 bits), Expect = 3.0e-68, Sum P(5) = 3.0e-68
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 600 IGNAVPPPLAKAIGYEI 616
IGNAVPPPLA A+G ++
Sbjct: 1482 IGNAVPPPLAFALGRKL 1498
Score = 49 (22.3 bits), Expect = 4.1e-83, Sum P(4) = 4.1e-83
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 51 TNDSSEEEILDNEHEEKDETIYTEYYRKTKDK 82
T+ S++ I NEHE ++ YY+ TK++
Sbjct: 319 TSASNKFYIKINEHEIANDYPLPSYYKNTKEE 350
Score = 39 (18.8 bits), Expect = 4.5e-82, Sum P(4) = 4.5e-82
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 52 NDSSEEEILDNEHEEKDE 69
++ EEEI ++E E+++E
Sbjct: 636 HEVEEEEIEEDEEEDENE 653
>TAIR|locus:2155959 [details] [associations]
symbol:MET1 "methyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;RCA] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0010069 "zygote
asymmetric cytokinesis in embryo sac" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008168
"methyltransferase activity" evidence=TAS] [GO:0009910 "negative
regulation of flower development" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0016568 GO:GO:0009910 GO:GO:0008168 GO:GO:0006349
EMBL:AB016872 GO:GO:0009294 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 GO:GO:0010069 GO:GO:0010216
GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047 EMBL:L10692
EMBL:AY699012 EMBL:AK229013 EMBL:AK230148 IPI:IPI00536256
PIR:S59604 RefSeq:NP_199727.1 UniGene:At.20294
ProteinModelPortal:P34881 SMR:P34881 STRING:P34881 REBASE:11752
PaxDb:P34881 PRIDE:P34881 EnsemblPlants:AT5G49160.1 GeneID:834975
KEGG:ath:AT5G49160 TAIR:At5g49160 HOGENOM:HOG000083447
InParanoid:P34881 OMA:IWISTEL PhylomeDB:P34881
ProtClustDB:CLSN2685944 Genevestigator:P34881 GermOnline:AT5G49160
Uniprot:P34881
Length = 1534
Score = 438 (159.2 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 107/271 (39%), Positives = 151/271 (55%)
Query: 167 QDDCNLVLKS--LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNG 224
QDDC ++ L T+ + +LP +VD I GPPCQGFS +NR + SK++
Sbjct: 1159 QDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCE 1218
Query: 225 LVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGV 284
++ FLSF D F+P+Y +LENV V FNK + Q LL+M YQV F +L++G YGV
Sbjct: 1219 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1278
Query: 285 AQSRNRVVILASKPGYKLPSFPQPLHAFS-NQL-FTINGNL----VANKTSHAPYRSITV 338
+QSR R I A+ P LP +P+P+H F +L +++ L V + AP+R ITV
Sbjct: 1279 SQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITV 1338
Query: 339 RDAISDLPRVSQGANCYL--FHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSP 396
RD I DLP V G + + + FQ+ ++ G+ I L DHICK ++
Sbjct: 1339 RDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIR-GNTI---------ALTDHICKAMNE 1388
Query: 397 LMEMRIRLIPSFPNADWRDLPNICVKLPRGQ 427
L +R +LIP+ P ADW DLP V L G+
Sbjct: 1389 LNLIRCKLIPTRPGADWHDLPKRKVTLSDGR 1419
Score = 304 (112.1 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 57/103 (55%), Positives = 73/103 (70%)
Query: 494 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLT 553
G+ +IP+ L +TA R+N W+G+ GRL W +F T VT P P+ K G HPEQ R+LT
Sbjct: 1418 GRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILT 1477
Query: 554 VREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
VRE AR+QGFPDSY F G I ++QIGNAVPPPLA A+G ++
Sbjct: 1478 VRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKL 1520
Score = 160 (61.4 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 101 IHSKEFLPKFPMPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANF 160
I S+ P P P + L LD+F+GCGGL GL +AGV+ W++E E ++ N
Sbjct: 1077 IESEIVKPVEP-PKEIRLATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNH 1135
Query: 161 QECSVIQDDCNLVLKSLL-KGHTQHKGVSLPQKHEV 195
E +V D+CN++L++++ KG Q VS + +E+
Sbjct: 1136 PESTVFVDNCNVILRAIMEKGGDQDDCVSTTEANEL 1171
Score = 87 (35.7 bits), Expect = 1.3e-63, Sum P(5) = 1.3e-63
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 457 GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESF 490
G+ +IP+ L +TA R+N W+G+ GRL W +F
Sbjct: 1418 GRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNF 1451
Score = 63 (27.2 bits), Expect = 1.3e-63, Sum P(5) = 1.3e-63
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 600 IGNAVPPPLAKAIGYEI 616
IGNAVPPPLA A+G ++
Sbjct: 1504 IGNAVPPPLAFALGRKL 1520
Score = 56 (24.8 bits), Expect = 1.3e-82, Sum P(4) = 1.3e-82
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIK 42
H ++L R + T+LG+ + LFLTN C + L IK
Sbjct: 773 HGRFLQRGSMTVLGNAA--NERELFLTNECMTTQLKDIK 809
Score = 37 (18.1 bits), Expect = 1.3e-80, Sum P(4) = 1.3e-80
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVD 48
H+ + N + ++F + L C+ ID+++ V D
Sbjct: 387 HLPHRMLHNWALYNSDLRFISLELLPMKQCDDIDVNIFGSGVVTD 431
>TAIR|locus:2140892 [details] [associations]
symbol:MEE57 "maternal effect embryo arrest 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;ISS] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038
SMART:SM00439 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0009793 EMBL:AL049656 EMBL:AL161537
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
HSSP:O14717 TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 REBASE:2839
IPI:IPI00536439 PIR:T06663 RefSeq:NP_193097.1 UniGene:At.54310
ProteinModelPortal:Q9T0I1 SMR:Q9T0I1 STRING:Q9T0I1 PRIDE:Q9T0I1
EnsemblPlants:AT4G13610.1 GeneID:826994 KEGG:ath:AT4G13610
TAIR:At4g13610 InParanoid:Q9T0I1 OMA:ENWTISG PhylomeDB:Q9T0I1
ArrayExpress:Q9T0I1 Genevestigator:Q9T0I1 Uniprot:Q9T0I1
Length = 1404
Score = 428 (155.7 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 108/277 (38%), Positives = 152/277 (54%)
Query: 158 ANFQECSVIQDDCNLVLKS--LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARE 215
A ++C + DDC ++ L +++ +LP +VD I GPPCQGFS+LNR +
Sbjct: 1038 AIMEKCGDV-DDCISTTEAAELATKLDENQKSTLPLPGQVDFISGGPPCQGFSRLNRFSD 1096
Query: 216 LEKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFD 275
SK + ++ FLSF D F+PKY +LENV V FN+ LL+M YQV F
Sbjct: 1097 GSWSKNQCQMILAFLSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQVRFG 1156
Query: 276 VLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTI---NG-NLVANKTSH- 330
+L++G YG++Q R R I A+ P LP +P+P+H F+N F I G + A +++
Sbjct: 1157 LLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPGFKIPLSQGLHYAAVQSTKF 1216
Query: 331 -APYRSITVRDAISDLPRVSQGANCYLFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDH 389
AP+RSITVRDAI DLP + G + K + + M GS +L DH
Sbjct: 1217 GAPFRSITVRDAIGDLPPIESGES--------KINKEEMR--GSMT---------VLTDH 1257
Query: 390 ICKILSPLMEMRIRLIPSFPNADWRDLPNICVKLPRG 426
ICK ++ L +R + IP P ADWRDLP+ V L G
Sbjct: 1258 ICKKMNELNLIRCKKIPKTPGADWRDLPDEHVNLSNG 1294
Score = 261 (96.9 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 50/111 (45%), Positives = 75/111 (67%)
Query: 487 DESFDMT-GQKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILH 545
DE +++ G I+P +L++ A +N ++G+ GRL W + T +T P+ G H
Sbjct: 1286 DEHVNLSNGIVKNIVP-NLLNKAKDHNGYKGLYGRLDWHGNLPTCITNLQPMGLVGMCFH 1344
Query: 546 PEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEI 596
P+QDR+++VRE AR+QGFPDSY F G I D ++Q+GNAVPPPLA A+G ++
Sbjct: 1345 PDQDRIISVRECARSQGFPDSYKFSGNIKDKHRQVGNAVPPPLAFALGRKL 1395
Score = 134 (52.2 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 112 MPLDTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCN 171
+P L LD+F+GCGGL GL +AGV+ W++E E A ++ N + +V D+CN
Sbjct: 963 VPKGKRLATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCN 1022
Query: 172 LVLK 175
++L+
Sbjct: 1023 VILR 1026
Score = 73 (30.8 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 2 KAHVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCVDFVTNDSSEEEILD 61
K H + L R ++T+LG + LFLTN C ++ L IK TV + + + +
Sbjct: 650 KLHGKLLQRGSETVLGTAA--NERELFLTNECLTVQLKDIKGTVSFEIRSRPWGHQYKKE 707
Query: 62 NEHEEKDETIYTEYYRKTKD 81
+ +K + E RK KD
Sbjct: 708 HMAADKLDRARAEE-RKAKD 726
Score = 62 (26.9 bits), Expect = 1.7e-56, Sum P(5) = 1.7e-56
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLA A+G ++
Sbjct: 1379 VGNAVPPPLAFALGRKL 1395
Score = 55 (24.4 bits), Expect = 1.7e-56, Sum P(5) = 1.7e-56
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 459 KNTIIPWSLVHTASRNNNWQGVLGRLAW 486
KN I+P +L++ A +N ++G+ GRL W
Sbjct: 1297 KN-IVP-NLLNKAKDHNGYKGLYGRLDW 1322
Score = 38 (18.4 bits), Expect = 4.8e-71, Sum P(4) = 4.8e-71
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 62 NEHEEKDETIYTEYYRKTKDK 82
NE E + YY+ TKD+
Sbjct: 272 NEDEIAHDYPLPSYYKNTKDE 292
>UNIPROTKB|F1PAS9 [details] [associations]
symbol:DNMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677 GO:GO:0006306
GO:GO:0008168 PANTHER:PTHR10629 GeneTree:ENSGT00390000005100
EMBL:AAEX03010534 Ensembl:ENSCAFT00000013291 OMA:TEDCHAL
Uniprot:F1PAS9
Length = 477
Score = 419 (152.6 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 124/377 (32%), Positives = 186/377 (49%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
L+ D FSGCGG G +AG+ + W++E+ A + + F E DC+ + K
Sbjct: 63 LRTSDAFSGCGGWWGGH-RAGLPETLWAIEMWDPAANNPGSTFTE------DCHALPKLA 115
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
+ G T + P++ V ++ GPPCQG +NR SKLKN LV + LS+CD ++
Sbjct: 116 MAGRTNPP--ACPRRGAVVMLCGGPPCQGLG-INRVTSPTCSKLKNTLVVSLLSYCDYYR 172
Query: 238 PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASK 297
P+ +LENV V F ++ +L+ Q T V Q+G G AQ++ R +ILA+
Sbjct: 173 PRCFLLENVRNSVSFQRSTVLRLSVPASSTW-LQWTPGVSQAGRCGPAQTQRRAIILAAA 231
Query: 298 PGYKLPSFPQPLHAFSN---QL-FTINGNLVANKT--SHAPYRSITVRDAISD-LPRVSQ 350
PG K P P+ L F+ QL ++ V+N T S P+R+ITVRD +SD L +
Sbjct: 232 PG-KPPLAPELLRVFAARACQLSVVVDKRFVSNVTGFSSGPFRTITVRDTVSDNLKKKKS 290
Query: 351 GANCY--LFHNPPKTHFQRMMKDGSRIHDIHINLRELLQDHICKILSPLMEMRIRLIPSF 408
GA+ L+ P++ QR ++ G + +++DHI K S L+ R R IP
Sbjct: 291 GASGLGILYDGEPQSWLQRQLR-GP--------YQPVVRDHIRKAPSALVATRRRHIPPA 341
Query: 409 PNADWRDLPNICVKLPRGQHSYTEKLKYNAXXXXXXXXXXXXXXXXXXGQK--------- 459
P +DWRDLPN +LP G + + Y+ G K
Sbjct: 342 PGSDWRDLPNTEARLPEGTTARRLRDTYHDRRNACSSTGAARGCSCVEGGKAWDSAARRF 401
Query: 460 NTIIPWSLVHTASRNNN 476
NT+ PW L HT +R+ +
Sbjct: 402 NTLSPWRLPHTGNRHRS 418
Score = 152 (58.6 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 488 ESFDMTGQK-NTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHP 546
+++D ++ NT+ PW L HT +R+ + G+ P+P ++LHP
Sbjct: 392 KAWDSAARRFNTLSPWRLPHTGNRHRS--GMASS-----------APPSPTLT--RVLHP 436
Query: 547 EQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPPPL 588
EQ RV + +E A +QGFPD+Y G I D ++Q+GNAVPPPL
Sbjct: 437 EQHRV-SEQECAPSQGFPDAYGPFGNIPDKHRQVGNAVPPPL 477
Score = 48 (22.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 600 IGNAVPPPL 608
+GNAVPPPL
Sbjct: 469 VGNAVPPPL 477
>UNIPROTKB|D4A0P3 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003886 PANTHER:PTHR10629
InterPro:IPR022702 Pfam:PF12047 GeneTree:ENSGT00390000005100
IPI:IPI00947847 ProteinModelPortal:D4A0P3
Ensembl:ENSRNOT00000064304 ArrayExpress:D4A0P3 Uniprot:D4A0P3
Length = 1410
Score = 365 (133.5 bits), Expect = 2.9e-46, Sum P(4) = 2.9e-46
Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 495 QKNTIIPWSLVHTASRNNNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTV 554
Q NT+IPW L HT +R+N+W G+ GRL WD F T VT P P+ KQG++LHPEQ RV++V
Sbjct: 1283 QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1342
Query: 555 REYARAQGFPDSYVFRGGICDMYKQIGNAVPPPLAKAIGYEIIKCI 600
RE AR+QGFPD+Y G I D ++Q+GNAVPPPLAKAIG EI C+
Sbjct: 1343 RECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKLCL 1388
Score = 174 (66.3 bits), Expect = 2.9e-46, Sum P(4) = 2.9e-46
Identities = 45/126 (35%), Positives = 66/126 (52%)
Query: 108 PKFP-MPLDTP-LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSV 165
PK P + P L+ LD+FSGCGGL EG QAG+++ W++E+ A ++ N +V
Sbjct: 1131 PKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTV 1190
Query: 166 IQDDCNLVLKSLLKGH-TQHKGVSLPQKHEVDLIVAGPPCQGFSQL-NRARELEKSKLKN 223
+DCN++LK ++ G T G LPQK + L P + L N L + N
Sbjct: 1191 FTEDCNVLLKLVMAGEVTNSLGQRLPQKRHIPL----SPGSDWRDLPNIQVRLRDGVITN 1246
Query: 224 GLVFTF 229
L +TF
Sbjct: 1247 KLRYTF 1252
Score = 166 (63.5 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 46/146 (31%), Positives = 66/146 (45%)
Query: 361 PKTHFQRMMKDGSRI--HDIHINLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPN 418
P R+ G+ + D ++ L+ ++ + L + + R IP P +DWRDLPN
Sbjct: 1176 PAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQK-RHIPLSPGSDWRDLPN 1234
Query: 419 ICVKLPRGQHSYTEKLKY---NAXXXXXXXXXXXXXXXXXXG--------QKNTIIPWSL 467
I V+L G T KL+Y + G Q NT+IPW L
Sbjct: 1235 IQVRLRDGV--ITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCL 1292
Query: 468 VHTASRNNNWQGVLGRLAWDESFDMT 493
HT +R+N+W G+ GRL WD F T
Sbjct: 1293 PHTGNRHNHWAGLYGRLEWDGFFSTT 1318
Score = 79 (32.9 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 600 IGNAVPPPLAKAIGYEI 616
+GNAVPPPLAKAIG EI
Sbjct: 1368 VGNAVPPPLAKAIGLEI 1384
Score = 68 (29.0 bits), Expect = 2.9e-46, Sum P(4) = 2.9e-46
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 4 HVQWLVRPNDTILGDKIQFDNSTLFLTNACESIDLSVIKKTVCV 47
H W DT+LG D LFL CE++ LS I V V
Sbjct: 795 HAHWFCAGTDTVLG--ATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 44 (20.5 bits), Expect = 2.9e-46, Sum P(4) = 2.9e-46
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 49 FVTNDSSEEEILDNEHEEKDETIYTEYYRKTKD 81
F N + ++ + +E +Y E+YRK D
Sbjct: 949 FTFNIKMASPMKRSKRDPVNENLYPEHYRKYSD 981
Score = 43 (20.2 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 357 FHNPPKTHFQRMMKDGSRIHDIH-INLRELLQDHICKILSPLMEM 400
F +PPKT + +D + I L EL Q + K+L L E+
Sbjct: 879 FESPPKT---QPTEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEV 920
Score = 41 (19.5 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 122 DLFSGCG--GLMEGLCQAGVAKPC 143
D +GC G + G+C K C
Sbjct: 1254 DTKNGCSSTGALRGVCSCAEGKTC 1277
Score = 40 (19.1 bits), Expect = 6.5e-43, Sum P(3) = 6.5e-43
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 57 EEILDNEHEEKDETIYTEYYRKTKDKHFVQPNARPLELAYILKIIHSK-EFLPKFPMP 113
E+I E KDE E RKT K +P + P++ + K + +PK P
Sbjct: 301 EQITPEPPEGKDEDEREEKRRKTTRKK-PEPLSIPVQSRVERRASQGKAKCIPKLNPP 357
Score = 38 (18.4 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 103 SKE-FLPKFPMPLDTPLKCLDLFSGCGGLMEGL--CQAGVAKPCWSVELERS 151
S+E +L K L+ L CL+ +G L + C A ++P W E+ S
Sbjct: 74 SEEGYLAKVKTLLNKDL-CLE--NGTLSLTQKANGCPANGSRPTWKAEMADS 122
Score = 37 (18.1 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 80 KDKHFVQPNARPLELA 95
KDK +P ++P +LA
Sbjct: 276 KDKRSSRPRSQPRDLA 291
>TAIR|locus:2205015 [details] [associations]
symbol:CMT3 "chromomethylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;RCA;IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;RCA] [GO:0010425 "DNA methylation on cytosine within a
CNG sequence" evidence=IMP] [GO:0045814 "negative regulation of
gene expression, epigenetic" evidence=IGI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IMP] [GO:0010069
"zygote asymmetric cytokinesis in embryo sac" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IGI;RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS50013 PROSITE:PS51038
SMART:SM00298 SMART:SM00439 Pfam:PF00385 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0006342 GO:GO:0051567 InterPro:IPR016197 SUPFAM:SSF54160
EMBL:AC013289 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
eggNOG:COG0270 KO:K00558 GO:GO:0003886 InterPro:IPR025821
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:AF383170 EMBL:AF364174
IPI:IPI00534552 PIR:G96719 RefSeq:NP_177135.1 UniGene:At.35376
ProteinModelPortal:Q94F88 SMR:Q94F88 STRING:Q94F88 REBASE:4853
PaxDb:Q94F88 PRIDE:Q94F88 EnsemblPlants:AT1G69770.1 GeneID:843313
KEGG:ath:AT1G69770 TAIR:At1g69770 HOGENOM:HOG000082844
InParanoid:Q94F88 OMA:EWEKLCI PhylomeDB:Q94F88
ProtClustDB:CLSN2913566 Genevestigator:Q94F88 GermOnline:AT1G69770
GO:GO:0010425 GO:GO:0010069 Uniprot:Q94F88
Length = 839
Score = 274 (101.5 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 82/282 (29%), Positives = 133/282 (47%)
Query: 155 SYDANFQECSVIQ--DDCNLVLKSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
+YD + I+ +C ++ +K +K LP VD++ GPPCQG S NR
Sbjct: 411 NYDDSHDTWEPIEGLSNCRGKIEEFVK--LGYKSGILPLPGGVDVVCGGPPCQGISGHNR 468
Query: 213 AREL--EKSKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY 270
R L KN + +++ + +PK++++ENV ++ K + + LL+MNY
Sbjct: 469 FRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNY 528
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAF---SNQLFTINGNLVANK 327
QV ++ +G YG+AQ R R + + P +P FP P H N + GN+VA
Sbjct: 529 QVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYD 588
Query: 328 TSHAPYRS--ITVRDAISDLPRV--SQGANCYLFHNPPKTHFQ---RMMKD-GSRIHDIH 379
H + + ++D ISDLP V S+ + + P T FQ R+ KD S
Sbjct: 589 EGHTVKLADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKS 648
Query: 380 INLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+ + +L DH L+ R+ +P A++RD P + V
Sbjct: 649 KSKKHVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIV 690
Score = 204 (76.9 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 49/103 (47%), Positives = 61/103 (59%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL WDE T+VT P N+ I+HPEQ+RVL++RE AR QGFPD Y G Y
Sbjct: 731 GRLWWDEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYI 788
Query: 579 QIGNAVPPPLAKAIGYEIIKCI-GNAV--PPPLAKAIGYEIIK 618
Q+GNAV P+AKA+GY + G AV P L G+ +K
Sbjct: 789 QVGNAVAVPVAKALGYALGTAFQGLAVGKDPLLTLPEGFAFMK 831
Score = 68 (29.0 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPC-----WSVELERSEAASYDANFQECSV 165
LDL+SGCG + GLC W+V++ S N E +V
Sbjct: 272 LDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNV 321
Score = 60 (26.2 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 13/61 (21%), Positives = 35/61 (57%)
Query: 6 QWLVRPNDTILGD-KIQFDNSTLFLTNACESIDLSVIKKTVCVDFVT-NDSSEEEILDNE 63
+W RP+DT++ + +I +F + ++ +L +++K + + + N++++E I E
Sbjct: 147 RWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKETIPATE 206
Query: 64 H 64
+
Sbjct: 207 N 207
Score = 37 (18.1 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 105 EFLPKFPMP 113
E +P+FP+P
Sbjct: 558 EIIPQFPLP 566
>TAIR|locus:2117104 [details] [associations]
symbol:CMT2 "chromomethylase 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0003677 EMBL:AL021711 EMBL:AL161549
GO:GO:0006351 GO:GO:0016568 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 PROSITE:PS00598 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821 PANTHER:PTHR10629
EMBL:AF383171 EMBL:BX828439 IPI:IPI00539325 PIR:T05039
RefSeq:NP_193637.2 UniGene:At.32846 ProteinModelPortal:Q94F87
SMR:Q94F87 STRING:Q94F87 REBASE:3168 PaxDb:Q94F87 PRIDE:Q94F87
EnsemblPlants:AT4G19020.1 GeneID:827640 KEGG:ath:AT4G19020
TAIR:At4g19020 InParanoid:Q94F87 OMA:NGCQLRR PhylomeDB:Q94F87
Genevestigator:Q94F87 GermOnline:AT4G19020 Uniprot:Q94F87
Length = 1295
Score = 276 (102.2 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 78/254 (30%), Positives = 123/254 (48%)
Query: 185 KGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEK--SKLKNGLVFTFLSFCDLFQPKYII 242
K LP V +I GPPCQG S NR R ++ + +N + F+ + +P Y++
Sbjct: 896 KSKILPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVL 955
Query: 243 LENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYKL 302
+ENV ++ +K + + L+ M YQ ++ +G YG++Q R+RV + + P L
Sbjct: 956 MENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNL 1015
Query: 303 PSFPQPLH----AFSNQL-FTINGNLVANKTSHAPYRSITVRDAISDLPRVS--QGANCY 355
P FP P H + L F N A +++ ++DAISDLP VS +
Sbjct: 1016 PPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKL 1075
Query: 356 LFHNPPKTHFQRMMKD------GSRIHDIHINLRE-LLQDHICKILSPLMEMRIRLIPSF 408
+ + PKT FQR ++ GS I + N R LL DH ++ R+ IP
Sbjct: 1076 PYESLPKTDFQRYIRSTKRDLTGSAIDNC--NKRTMLLHDHRPFHINEDDYARVCQIPKR 1133
Query: 409 PNADWRDLPNICVK 422
A++RDLP + V+
Sbjct: 1134 KGANFRDLPGLIVR 1147
Score = 201 (75.8 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 520 RLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQ 579
RL WDE+ T++T P + Q +LHPEQDRVLT+RE AR QGFPD + F G I + Y Q
Sbjct: 1187 RLWWDETVPTVLTVPT-CHSQA-LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERYCQ 1244
Query: 580 IGNAVPPPLAKAIGYEI 596
IGNAV +++A+GY +
Sbjct: 1245 IGNAVAVSVSRALGYSL 1261
Score = 87 (35.7 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 50/189 (26%), Positives = 70/189 (37%)
Query: 5 VQWLVRPNDTILGDKI-QFDNSTLFLTNACES--IDLSVIKKTVC-----VDFVTNDSSE 56
VQW R DTI+ + D LF + +D + K TV V N
Sbjct: 615 VQWFYRATDTIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSIKS 674
Query: 57 EEILDNEHEEKDETIYTEYYRKTKDKHF-VQPNARPLELAYILKIIHSKEFLPKFPMPLD 115
+ D E+ + T T KT + + P E I+ K F + P+
Sbjct: 675 DYYFDMEYCVEYSTFQTLRNPKTSENKLECCADVVPTESTE--SILKKKSFSGELPV--- 729
Query: 116 TPLKCLDLFSGCGGLMEGLCQ----AGV-AKPCWSVELERSEAASYDANFQECSVIQDDC 170
LDL+SGCGG+ GL +GV W+V+ + S N V D
Sbjct: 730 -----LDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAA 784
Query: 171 NLVLKSLLK 179
L+ LLK
Sbjct: 785 GDFLQ-LLK 792
Score = 45 (20.9 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 600 IGNAVPPPLAKAIGYEI 616
IGNAV +++A+GY +
Sbjct: 1245 IGNAVAVSVSRALGYSL 1261
>TAIR|locus:2025787 [details] [associations]
symbol:CMT1 "chromomethylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0009294 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC011713 EMBL:AF039364 EMBL:AF039366
EMBL:AF039367 EMBL:AF039368 EMBL:AF039369 EMBL:AF039370
EMBL:AF039371 EMBL:AF039372 EMBL:AF039373 EMBL:U53501
IPI:IPI00531370 IPI:IPI00782822 PIR:H96839 RefSeq:NP_565245.1
UniGene:At.5460 ProteinModelPortal:O49139 SMR:O49139 STRING:O49139
REBASE:3262 PaxDb:O49139 PRIDE:O49139 EnsemblPlants:AT1G80740.1
GeneID:844413 KEGG:ath:AT1G80740 TAIR:At1g80740 eggNOG:COG0270
InParanoid:O49139 KO:K00558 OMA:FPDCYKL PhylomeDB:O49139
ProtClustDB:CLSN2917515 ArrayExpress:O49139 Genevestigator:O49139
GermOnline:AT1G80740 GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821
PANTHER:PTHR10629 Uniprot:O49139
Length = 791
Score = 288 (106.4 bits), Expect = 6.1e-39, Sum P(3) = 6.1e-39
Identities = 86/282 (30%), Positives = 136/282 (48%)
Query: 154 ASYDANFQECSVIQDDCNLVLKS-LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNR 212
+SYD ++ S + +C LK ++ G H LP V + GPPCQG S NR
Sbjct: 371 SSYDT-WEPYSGL-GNCKEKLKEYVIDGFKSHL---LPLPGTVYTVCGGPPCQGISGYNR 425
Query: 213 ARELEK--SKLKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNY 270
R E KN + FL D +P Y+++ENV L+ F+K + + + MNY
Sbjct: 426 YRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNY 485
Query: 271 QVTFDVLQSGNYGVAQSRNRVVILASKPGYKLPSFPQPLHAFSNQLFTING--NLVANKT 328
Q ++ +G+YG+ Q RNRV + A++P KLP +P P H + + T +L +
Sbjct: 486 QTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQVGRI 545
Query: 329 SHAPYR---SITVRDAISDLPRVSQG-ANCYLFHNP--PKTHFQRMM---KDGSRIHDIH 379
+ ++T+ DAISDLP V+ AN + +N PKT F+ + + + +
Sbjct: 546 QMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFG 605
Query: 380 INLRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLPNICV 421
+ L DH +L R+ IP A++RD+P + V
Sbjct: 606 GDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLV 647
Score = 180 (68.4 bits), Expect = 6.1e-39, Sum P(3) = 6.1e-39
Identities = 39/76 (51%), Positives = 50/76 (65%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GRL DE +T+VT P N+ ++HP Q+RVL+VRE AR QGFPD Y G I + Y
Sbjct: 686 GRLWGDEIVNTVVTRAEPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYI 743
Query: 579 QIGNAVPPPLAKAIGY 594
Q+GNAV P+ A+GY
Sbjct: 744 QVGNAVAVPVGVALGY 759
Score = 71 (30.1 bits), Expect = 6.1e-39, Sum P(3) = 6.1e-39
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 121 LDLFSGCGGLMEGLCQ----AGVAKPC-WSVELERSEAASYDANFQECSVIQDDCNLVLK 175
LDL+SGCG + G C +GV WSV++ + S N E V + L
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFL- 286
Query: 176 SLLK 179
+LLK
Sbjct: 287 ALLK 290
Score = 45 (20.9 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 600 IGNAVPPPLAKAIGY 614
+GNAV P+ A+GY
Sbjct: 745 VGNAVAVPVGVALGY 759
>TIGR_CMR|SPO_1049 [details] [associations]
symbol:SPO_1049 "DNA methylase, C-5 cytosine-specific
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0006304
"DNA modification" evidence=ISS] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 OMA:LLYEFAR RefSeq:YP_166300.1
ProteinModelPortal:Q5LUK5 REBASE:10710 GeneID:3194254
KEGG:sil:SPO1049 PATRIC:23375391 HOGENOM:HOG000225505
ProtClustDB:CLSK933423 Uniprot:Q5LUK5
Length = 373
Score = 202 (76.2 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 56/191 (29%), Positives = 93/191 (48%)
Query: 121 LDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDC-NLVLKSLLK 179
+DLF G GGL GL AG + ++ + +++A I +L ++ LL+
Sbjct: 6 IDLFCGAGGLSAGLEMAGFTVLAGN-DIFDAAGKTFEATHPRAKFIPGPIEDLTIEHLLE 64
Query: 180 GHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPK 239
V+ + E+ ++ GPPCQ +S N R + + L +L D +P+
Sbjct: 65 -------VTGLKPGELTVLAGGPPCQAYSVYNHQRGMHDERAT--LFKEYLRIVDGLRPE 115
Query: 240 YIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPG 299
+I++ENVTG+ E + I L + Y+V VL++ YGV Q R RVV + ++ G
Sbjct: 116 WIVMENVTGIYSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVG 175
Query: 300 YKLPSFPQPLH 310
+ S P+P H
Sbjct: 176 VPI-SHPEPTH 185
Score = 185 (70.2 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 519 GRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYK 578
GR+ WD T++T + G +HPEQDR ++VRE AR Q FPD + F G D Y
Sbjct: 286 GRMTWDGLSCTVLTKCDI--HWGAYIHPEQDRAISVREAARLQAFPDWFEFHGSRTDQYV 343
Query: 579 QIGNAVPPPLAKAIGYEIIKCI 600
Q+GNAVPP L KAIG ++ I
Sbjct: 344 QVGNAVPPVLGKAIGDHLMGLI 365
Score = 84 (34.6 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 329 SHAPYRS---ITVRDAISDLPRVSQGAN----CYLFHNPPKTHFQRMMKDGSRIHDIHIN 381
+H P RS +T++DAI DLP + G YL P T +QR M+ + +
Sbjct: 184 THGPGRSMPFVTIKDAIGDLPALENGEAKPDAAYLDGKP--TSYQRQMRGNATV------ 235
Query: 382 LRELLQDHICKILSPLMEMRIRLIPSFPNADWRDLP 417
+ +H L + R+ IP P WRD+P
Sbjct: 236 ----ITNHAAPRLGQVNMDRLPHIP--PGGSWRDIP 265
Score = 58 (25.5 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 600 IGNAVPPPLAKAIG 613
+GNAVPP L KAIG
Sbjct: 345 VGNAVPPVLGKAIG 358
>UNIPROTKB|O34939 [details] [associations]
symbol:ydiO "Probable BsuMI modification methylase subunit
YdiO" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008168 "methyltransferase activity" evidence=NAS] [GO:0009307
"DNA restriction-modification system" evidence=IMP] [GO:0032776
"DNA methylation on cytosine" evidence=IMP] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
GO:GO:0003677 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0008168
eggNOG:COG0270 KO:K00558 GO:GO:0003886 GO:GO:0090116
PANTHER:PTHR10629 HSSP:O14717 TIGRFAMs:TIGR00675 GO:GO:0009307
EMBL:AB007637 PIR:H69787 RefSeq:NP_388487.1
ProteinModelPortal:O34939 SMR:O34939 REBASE:3612
EnsemblBacteria:EBBACT00000001239 GeneID:939892 KEGG:bsu:BSU06060
PATRIC:18972844 GenoList:BSU06060 HOGENOM:HOG000098493 OMA:LLYEFAR
ProtClustDB:CLSK2460890 BioCyc:BSUB:BSU06060-MONOMER Uniprot:O34939
Length = 427
Score = 210 (79.0 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 59/182 (32%), Positives = 86/182 (47%)
Query: 122 DLFSGCGGLMEGL---CQAGVAKPCWSVELERSEAAS--YDANFQECSVIQDDCNLVLKS 176
DLFSGCGGL G+ C+A P +S + +EAA Y+ NF + + +
Sbjct: 88 DLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIEKHING 147
Query: 177 LLKGHTQHKGVSLPQK-HEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDL 235
L + + K ++D I+AGPPCQG S LN + +N L+ +L
Sbjct: 148 ELGAPLTVEEQRIKDKVKKIDFILAGPPCQGHSDLNN--HTRRKDPRNALLMRVSRVIEL 205
Query: 236 FQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILA 295
FQP +++ENV G++H + H L Y VL + GV+Q+R R I A
Sbjct: 206 FQPSSVLVENVPGIIHDKSGSFKEFKNH-LKTQGYYFDEIVLNAEKLGVSQARRRYFIFA 264
Query: 296 SK 297
SK
Sbjct: 265 SK 266
Score = 104 (41.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 512 NNWQGVLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYARAQGFPDSYVFRG 571
++++ V GR+ WD TI T QG+ +H R +T E AR Q FPD + F
Sbjct: 341 HSYKSVYGRMYWDRPAPTI-TRGFGSTGQGRFVHSLLKRTITPHEAARIQFFPDFFNFGD 399
Query: 572 GICDMYKQ-IGNAVPPPLA 589
Y+ IGNAVP L+
Sbjct: 400 LRRRQYQDVIGNAVPSKLS 418
>UNIPROTKB|Q2KFY7 [details] [associations]
symbol:MGCH7_ch7g548 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 GO:GO:0003677 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006306 GO:GO:0008168 EMBL:CM000230
PANTHER:PTHR10629 ProteinModelPortal:Q2KFY7 Uniprot:Q2KFY7
Length = 877
Score = 150 (57.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 122 DLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSLLKGH 181
D+F G GG +G AG + ++VE AA+Y NF E ++ + D + L
Sbjct: 457 DMFCGAGGASQGARAAGF-RLGYAVEHWNHAAATYRHNFPEVNLFEGD---IFDFL---- 508
Query: 182 TQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQPKYI 241
Q + VD++ PPCQ +S + R + ++ +F +P+
Sbjct: 509 -QRNDLDF-----VDILHLSPPCQYWSPA-KTRPGKNDEINRAALFACGDVVQKLRPRLF 561
Query: 242 ILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVILASKPGYK 301
LE G++ + + Y V + ++ ++GV Q R R+V++ S PG
Sbjct: 562 TLEQTFGILREMHRPYFNKLVQWFTTLRYSVEWGIVHLQDWGVPQPRRRLVMIGSCPGEV 621
Query: 302 LPSFPQPLH 310
LP+ P H
Sbjct: 622 LPALPPASH 630
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 540 QGKILHPEQDRVLTVREYARAQGFPDSYVFRGGICDMYKQIGNAVPP 586
+GK HP R+ T RE A GFP + F+G + KQIGNA PP
Sbjct: 685 RGKTCHPSGRRLFTERELAGLHGFPHFFEFQGS--SVIKQIGNAFPP 729
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 593 GYEIIKCIGNAVPP 606
G +IK IGNA PP
Sbjct: 716 GSSVIKQIGNAFPP 729
>UNIPROTKB|O34680 [details] [associations]
symbol:ydiP "Probable BsuMI modification methylase subunit
YdiP" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008168 "methyltransferase activity" evidence=NAS] [GO:0009307
"DNA restriction-modification system" evidence=IMP] [GO:0032776
"DNA methylation on cytosine" evidence=IMP] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0003677 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0008168 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0009307 EMBL:AB007637 PIR:A69788 RefSeq:NP_388488.1
HSSP:P05102 ProteinModelPortal:O34680 SMR:O34680 REBASE:3613
EnsemblBacteria:EBBACT00000001724 GeneID:939876 KEGG:bsu:BSU06070
PATRIC:18972846 GenoList:BSU06070 HOGENOM:HOG000226162 OMA:GWAVNAV
ProtClustDB:CLSK561028 BioCyc:BSUB:BSU06070-MONOMER Uniprot:O34680
Length = 389
Score = 146 (56.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKSL 177
+K + LFSG GG+ GL Q+G + E++ A NF I+DD N + +
Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEIFC-EVDPLAKAVLSKNFPGVK-IEDDINEIRE-- 56
Query: 178 LKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLFQ 237
LP DL+ AG PCQ SQ ++ S+ +GLV + +
Sbjct: 57 -----------LPS---CDLVAAGFPCQDLSQAGGKEGIDGSR--SGLVKKLFELIEKKE 100
Query: 238 ----PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVI 293
P +I++ENV ++ N+ + + + L ++ Y + + + +G+ Q R+RV++
Sbjct: 101 HANRPPWILIENVPYMLRLNRGKAMSYLTSVLSELGYTWAYRTVDARCFGLPQRRHRVIL 160
Query: 294 LAS 296
LAS
Sbjct: 161 LAS 163
Score = 47 (21.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 546 PEQDRV--LTVREYARAQGFPDSYV---FRGG--ICD--MYKQIGNAVPPPLAKAIG 593
P +D V + +R+ R QGFP+ + G I + ++ +GNAV ++K IG
Sbjct: 233 PYEDIVGTINIRDAERLQGFPEDWTNITTETGKDIKEGARWRLVGNAVSVRVSKWIG 289
>UNIPROTKB|O14717 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine(38)-C(5))-methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=TAS] [GO:0090116
"C-5 methylation of cytosine" evidence=TAS] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0001975
GO:GO:0003723 EMBL:CH471072 GO:GO:0008033 eggNOG:COG0270
GO:GO:0003886 PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR
TIGRFAMs:TIGR00675 EMBL:AC067747 CTD:1787 HOVERGEN:HBG051385
InterPro:IPR025813 EMBL:AF012128 EMBL:AJ223333 EMBL:AF045888
EMBL:EF444974 EMBL:AL133415 EMBL:BC047733 EMBL:AF329940
EMBL:AF329941 EMBL:AF329942 EMBL:AF329943 EMBL:AF329944
IPI:IPI00034003 IPI:IPI00219905 IPI:IPI00219906 IPI:IPI00219907
IPI:IPI00219908 IPI:IPI00221269 RefSeq:NP_004403.1
UniGene:Hs.351665 PDB:1G55 PDBsum:1G55 ProteinModelPortal:O14717
SMR:O14717 IntAct:O14717 STRING:O14717 PhosphoSite:O14717
PaxDb:O14717 PRIDE:O14717 Ensembl:ENST00000351358
Ensembl:ENST00000358282 Ensembl:ENST00000377799
Ensembl:ENST00000412821 Ensembl:ENST00000424636
Ensembl:ENST00000495022 Ensembl:ENST00000525762 GeneID:1787
KEGG:hsa:1787 UCSC:uc001iop.3 GeneCards:GC10M017098 HGNC:HGNC:2977
HPA:CAB009468 MIM:602478 neXtProt:NX_O14717 PharmGKB:PA162406922
InParanoid:O14717 PhylomeDB:O14717 BioCyc:MetaCyc:HS03011-MONOMER
ChiTaRS:TRDMT1 EvolutionaryTrace:O14717 GenomeRNAi:1787
NextBio:7271 ArrayExpress:O14717 Bgee:O14717 CleanEx:HS_TRDMT1
Genevestigator:O14717 GermOnline:ENSG00000107614 Uniprot:O14717
Length = 391
Score = 146 (56.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 57/201 (28%), Positives = 97/201 (48%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL+ L+L+SG GG+ L ++ + A+ ++++ Y NF L+ K
Sbjct: 3 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQ-------LLAK 55
Query: 176 SLLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ +G++L + + D+I+ PPCQ F+++ R ++ S+ + L L
Sbjct: 56 TI-------EGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFL--HILDIL 106
Query: 234 DLFQ--PKYIILENVTGL-VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
Q PKYI+LENV G V ++ ++Q I +C YQ F +L + G+ SR R
Sbjct: 107 PRLQKLPKYILLENVKGFEVSSTRDLLIQTIENC--GFQYQ-EF-LLSPTSLGIPNSRLR 162
Query: 291 VVILASKPGYKLPSFPQPLHA 311
++A KL S P P A
Sbjct: 163 YFLIA-----KLQSEPLPFQA 178
Score = 46 (21.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAV 584
R T +E A GFP + F I Y+ +GN++
Sbjct: 341 RYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSL 377
>UNIPROTKB|P0AED9 [details] [associations]
symbol:dcm "DNA-cytosine methyltransferase" species:83333
"Escherichia coli K-12" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IDA]
[GO:0009307 "DNA restriction-modification system" evidence=IEA;IDA]
[GO:0006306 "DNA methylation" evidence=IDA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:X13330
EMBL:M32307 PIR:A37754 RefSeq:NP_416470.1 RefSeq:YP_490214.1
ProteinModelPortal:P0AED9 SMR:P0AED9 DIP:DIP-47858N IntAct:P0AED9
MINT:MINT-1237420 REBASE:2397 EnsemblBacteria:EBESCT00000002119
EnsemblBacteria:EBESCT00000014413 GeneID:12931871 GeneID:946479
KEGG:ecj:Y75_p1930 KEGG:eco:b1961 PATRIC:32119251 EchoBASE:EB0207
EcoGene:EG10211 HOGENOM:HOG000225506 OMA:KHRAAGN
ProtClustDB:PRK10458 BioCyc:EcoCyc:EG10211-MONOMER
BioCyc:ECOL316407:JW1944-MONOMER BioCyc:MetaCyc:EG10211-MONOMER
Genevestigator:P0AED9 GO:GO:0009307 Uniprot:P0AED9
Length = 472
Score = 118 (46.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 102 HSKEFLPKFPMPLDTP---LKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDA 158
H + LPK P P P + +DLF+G GG+ G G + ++ E + +Y A
Sbjct: 70 HLQTLLPK-P-PAHHPHYAFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKA 126
Query: 159 NFQECSVIQDDCNLVLKSLLKGHTQHKGVSLPQKH------EVDLIVAGPPCQGFSQ--L 210
N C N ++ + H + +H E D+++AG PCQ FS +
Sbjct: 127 NHY-CDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGV 185
Query: 211 NRARELEKSK-----LKNGLVFTFLSFCDLFQPKYIILENVTGLVHFNKNEILQCIFHCL 265
++ L ++ + L F + D +P +LENV L ++ + + I L
Sbjct: 186 SKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTL 245
Query: 266 LKMNYQVTFDVLQSG 280
++ Y V D +G
Sbjct: 246 DELGYDVA-DAEDNG 259
Score = 75 (31.5 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 33/98 (33%), Positives = 44/98 (44%)
Query: 501 PWSLVHTASRNNNWQG--VLGRLAWDESFDTIVTTPNPLNKQGKILHPEQDRVLTVREYA 558
P S+ T S G +L WD + +PLN+Q H + R LT RE A
Sbjct: 356 PQSVTRTLSARYYKDGAEILIDRGWDMATGE-KDFDDPLNQQ----H--RPRRLTPRECA 408
Query: 559 RAQGF--PDSYVFRGGICDM--YKQIGNAVPPPLAKAI 592
R GF P FR + D Y+Q GN+V P+ A+
Sbjct: 409 RLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAV 446
>UNIPROTKB|E2RM86 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629
KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675 CTD:1787
GeneTree:ENSGT00390000016416 InterPro:IPR025813 PROSITE:PS51607
EMBL:AAEX03001247 RefSeq:XP_848593.1 ProteinModelPortal:E2RM86
Ensembl:ENSCAFT00000007328 GeneID:487116 KEGG:cfa:487116
NextBio:20860760 Uniprot:E2RM86
Length = 391
Score = 141 (54.7 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 52/198 (26%), Positives = 98/198 (49%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL+ L+L+SG GG+ + L ++ + A+ ++++ Y NF L+ K
Sbjct: 3 PLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQ-------LLAK 55
Query: 176 SLLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ +G++L + K ++I+ PPCQ F+++ ++ + N L++ L+
Sbjct: 56 TI-------EGITLEEFDKLSFNMILMSPPCQPFTRIGLQGDVTDPRT-NSLLY-ILNIL 106
Query: 234 DLFQ--PKYIILENVTGL-VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
Q PKY++LENV G V ++ ++Q + +C YQ F +L ++G+ SR R
Sbjct: 107 PRLQKLPKYVLLENVKGFEVSSTRDLLIQTLENC--GFQYQ-EF-LLSPTSFGIPNSRLR 162
Query: 291 VVILASKPGYKLPSFPQP 308
++A LP F P
Sbjct: 163 YFLIAKLQSEPLP-FQAP 179
Score = 47 (21.6 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 550 RVLTVREYARAQGFPDSYVFRGGIC--DMYKQIGNAV 584
R T +E A GFP + F I Y+ +GN++
Sbjct: 341 RYFTPKEIANLLGFPSEFGFPEKITVKQRYRLLGNSL 377
>MGI|MGI:1274787 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 EMBL:AF012129 MGI:MGI:1274787
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 BRENDA:2.1.1.37
HOGENOM:HOG000265038 OMA:RLMSFPE CTD:1787 HOVERGEN:HBG051385
OrthoDB:EOG4MSCZB InterPro:IPR025813 EMBL:AF045889 IPI:IPI00115186
RefSeq:NP_034197.3 UniGene:Mm.6979 ProteinModelPortal:O55055
SMR:O55055 STRING:O55055 PhosphoSite:O55055 PaxDb:O55055
PRIDE:O55055 Ensembl:ENSMUST00000124488 GeneID:13434 KEGG:mmu:13434
InParanoid:O55055 NextBio:283863 Bgee:O55055 CleanEx:MM_TRDMT1
Genevestigator:O55055 GermOnline:ENSMUSG00000026723 Uniprot:O55055
Length = 415
Score = 125 (49.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL+ L+L+SG GG+ L ++ + A ++++ Y NF +L+ K
Sbjct: 3 PLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHT-------HLLSK 55
Query: 176 SLLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ +G+SL K ++I+ PPCQ F+++ ++ + + L L
Sbjct: 56 TI-------EGISLEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYI--LDIL 106
Query: 234 DLFQ--PKYIILENVTGL-VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
Q PKYI+LENV G V + ++Q I C YQ F +L + G+ SR R
Sbjct: 107 PRLQKLPKYILLENVKGFEVSSTRGLLIQTIEAC--GFQYQ-EF-LLSPSSLGIPNSRLR 162
Query: 291 VVILASKPGYKLPSFPQP 308
++A P F P
Sbjct: 163 YFLIAKLQSEPFP-FQAP 179
Score = 56 (24.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 550 RVLTVREYARAQGFPDSYVF--RGGICDMYKQIGNAVPPPLAKAIGYEIIKCIGNA 603
R T +E A QGFP + F + + Y+ +GN++ + + + + GNA
Sbjct: 341 RYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVLCEGFGNA 396
>ZFIN|ZDB-GENE-041008-138 [details] [associations]
symbol:trdmt1 "tRNA aspartic acid methyltransferase
1" species:7955 "Danio rerio" [GO:0006306 "DNA methylation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00095 ZFIN:ZDB-GENE-041008-138 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 KO:K15336
TIGRFAMs:TIGR00675 CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 InterPro:IPR025813 PROSITE:PS51607 EMBL:CU207275
EMBL:FP340248 EMBL:AB196920 IPI:IPI00496594 RefSeq:NP_001018153.1
UniGene:Dr.161731 SMR:Q588C1 STRING:Q588C1
Ensembl:ENSDART00000048633 GeneID:449878 KEGG:dre:449878
InParanoid:Q588C1 NextBio:20832928 Uniprot:Q588C1
Length = 381
Score = 110 (43.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 47/195 (24%), Positives = 85/195 (43%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L+ +L+SG GG+ L ++ V A+ +V++ + Y NF + L
Sbjct: 7 LRVFELYSGIGGMHYALKESLVPAEVVAAVDVNTTANLIYKHNFPTTQL--------LPK 58
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
++G T L D+I+ PPCQ F+++ ++ + K+ FL DL
Sbjct: 59 TIEGMTLQDFDRL----NFDMILMSPPCQPFTRIGLQGDVADPRTKS-----FLYILDLL 109
Query: 237 -----QPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
+P++I+LENV G F + + L + +Y ++ + G+ SR R
Sbjct: 110 PRLSKRPRFILLENVKG---FESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRY 166
Query: 292 VILASKPGYKLPSFP 306
++A + SFP
Sbjct: 167 FLIAKRAPETF-SFP 180
Score = 68 (29.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 524 DESFDTIVTTPNPLNKQGKI--LHPEQDRVLTVREYARAQGFPDSYVFRGGIC--DMYKQ 579
D +T+ + L+++ K+ L + R T RE +R GFPD + F I Y+
Sbjct: 302 DVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRLMGFPDHFTFPKHISFKQQYRV 361
Query: 580 IGNAV 584
+GN++
Sbjct: 362 LGNSL 366
>DICTYBASE|DDB_G0288047 [details] [associations]
symbol:dnmA "DNA (cytosine-5-)-methyltransferase"
species:44689 "Dictyostelium discoideum" [GO:0090116 "C-5
methylation of cytosine" evidence=IEA;ISS;IMP] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0031154 "culmination
involved in sorocarp development" evidence=IMP] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006306 "DNA methylation" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001525 Pfam:PF00145 PRINTS:PR00105
dictyBase:DDB_G0288047 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0030435
GO:GO:0031154 EMBL:AAFI02000107 eggNOG:COG0270 GO:GO:0003886
PANTHER:PTHR10629 RefSeq:XP_636955.1 HSSP:O14717
ProteinModelPortal:Q54JH6 STRING:Q54JH6 EnsemblProtists:DDB0231095
GeneID:8626430 KEGG:ddi:DDB_G0288047 KO:K15336 OMA:LFYEFAR
ProtClustDB:CLSZ2728849 TIGRFAMs:TIGR00675 Uniprot:Q54JH6
Length = 379
Score = 121 (47.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 56/230 (24%), Positives = 96/230 (41%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGVA-KPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L+ L+ +SG GG+ GL ++GV + S ++ + +Y F E D KS
Sbjct: 4 LRVLEFYSGIGGMHYGLQESGVDFQVIQSFDINTNANLNYKYTFNE-----DSSQ---KS 55
Query: 177 LLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCDLF 236
+ + V + + + + PPCQ F++L ++ + ++ + F L
Sbjct: 56 I-----ESYSVEELEGFKANAWLMSPPCQPFTRLGLQKDDQDNRTNS--FFHLLDVLTKI 108
Query: 237 Q--PKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
+ P YI++ENV G + + L+KMNY L +G+A R R +
Sbjct: 109 KDPPTYILIENVFGFAKKGSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCI 168
Query: 295 ASKPGYKLPSFP--QPLHAFSNQLFTINGNLVANKTSHAPYRSITVRDAI 342
A + G KL +F Q H +N N N Y ++ + D I
Sbjct: 169 AKRNG-KL-NFKKEQDKHNEKVDENKLNNNS-NNNNEQNKYDNLKILDHI 215
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 542 KILHPEQDRVLTVREYARAQGFPDSYVFRGGICDM--YKQIGNAV 584
K L P + R + +E R GFP+ + F + + Y+ IGN++
Sbjct: 303 KSLIPLKLRYFSPKEITRLHGFPEEFKFSPKLTTIQCYRLIGNSL 347
>UNIPROTKB|Q7YS61 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine-5-)-methyltransferase"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675
HOGENOM:HOG000265038 EMBL:AY244708 EMBL:BT021768 IPI:IPI00708300
IPI:IPI00717277 RefSeq:NP_861528.1 UniGene:Bt.22960
ProteinModelPortal:Q7YS61 SMR:Q7YS61 STRING:Q7YS61 PRIDE:Q7YS61
Ensembl:ENSBTAT00000027378 GeneID:353353 KEGG:bta:353353 CTD:1787
GeneTree:ENSGT00390000016416 HOVERGEN:HBG051385 InParanoid:Q7YS61
OrthoDB:EOG4MSCZB NextBio:20812736 InterPro:IPR025813
Uniprot:Q7YS61
Length = 391
Score = 122 (48.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 52/198 (26%), Positives = 92/198 (46%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL+ L+L+SG GG+ + L ++ + A+ +V++ Y NF L+ K
Sbjct: 3 PLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQ-------LLAK 55
Query: 176 SLLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ +G++L + + ++I+ PPCQ F+++ ++ + + L L
Sbjct: 56 TI-------EGITLEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFL--HILDIL 106
Query: 234 DLFQ--PKYIILENVTGLVHFNKNEIL-QCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
Q PKYI+LENV G + ++L Q I +C YQ F +L + G+ SR R
Sbjct: 107 PRLQKLPKYILLENVKGFEMSSTRDLLIQTIENC--GFQYQ-EF-LLSPTSLGIPNSRLR 162
Query: 291 VVILASKPGYKLPSFPQP 308
++A P F P
Sbjct: 163 YFLIAKLQPEPFP-FQAP 179
Score = 53 (23.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 524 DESFDTIVTTPNPLNKQGKILHPE--QDRVLTVREYARAQGFPDSYVF--RGGICDMYKQ 579
D + I + L+++ KI+ Q R T +E A GFP + F + Y+
Sbjct: 313 DVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIANLLGFPPEFGFPEMTTVKQRYRL 372
Query: 580 IGNAV 584
+GN++
Sbjct: 373 LGNSL 377
>UNIPROTKB|F1NJ02 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] InterPro:IPR001525 InterPro:IPR018117
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 OMA:LFYEFAR
TIGRFAMs:TIGR00675 GeneTree:ENSGT00390000016416 InterPro:IPR025813
PROSITE:PS51607 EMBL:AADN02000651 IPI:IPI00619885 PRIDE:F1NJ02
Ensembl:ENSGALT00000014137 Uniprot:F1NJ02
Length = 398
Score = 121 (47.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 118 LKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLKS 176
L+ L+L+SG GG+ + L ++ + A+ +V++ Y NF L K+
Sbjct: 4 LRVLELYSGIGGMHQALKESCICAEVVAAVDVNTLANEVYKHNFPSTP-------LWAKT 56
Query: 177 LLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+ +G++L + + D+I+ PPCQ F+++ ++ + K+ L L
Sbjct: 57 I-------EGITLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYI--LDILP 107
Query: 235 LFQ--PKYIILENVTGLVHFN-KNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRV 291
Q PKY++LENV G + +NE+L+ + C K YQ F +L G+ SR R
Sbjct: 108 RLQKCPKYLLLENVKGFESSSARNELLRTLETCGFK--YQ-EF-LLSPTCLGIPNSRLRY 163
Query: 292 VILA 295
++A
Sbjct: 164 FLIA 167
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 550 RVLTVREYARAQGFPDSYVF--RGGICDMYKQIGNAV 584
R T RE A GFP + F + I Y+ +GN++
Sbjct: 348 RYFTPREIANLHGFPPEFGFPDKVSIKQCYRLLGNSL 384
>RGD|1306292 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0001975 "response to
amphetamine" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 RGD:1306292
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 HOGENOM:HOG000265038
OMA:RLMSFPE CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 OrthoDB:EOG4MSCZB InterPro:IPR025813
EMBL:BC098700 IPI:IPI00363164 RefSeq:NP_001026813.1 UniGene:Rn.115
ProteinModelPortal:Q4G073 SMR:Q4G073 STRING:Q4G073 PRIDE:Q4G073
Ensembl:ENSRNOT00000038651 GeneID:291324 KEGG:rno:291324
UCSC:RGD:1306292 InParanoid:Q4G073 NextBio:632414
Genevestigator:Q4G073 GermOnline:ENSRNOG00000026132 Uniprot:Q4G073
Length = 391
Score = 127 (49.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 50/185 (27%), Positives = 88/185 (47%)
Query: 117 PLKCLDLFSGCGGLMEGLCQAGV-AKPCWSVELERSEAASYDANFQECSVIQDDCNLVLK 175
PL+ L+L+SG GG+ L ++ V A ++++ Y NF +L+ K
Sbjct: 3 PLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPHT-------HLLAK 55
Query: 176 SLLKGHTQHKGVSLPQ--KHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFC 233
++ +G+SL + K ++I+ PPCQ F+++ ++ + N ++ L
Sbjct: 56 TI-------EGISLEEFDKLSFNMILMSPPCQPFTRIGLQGDMSDRRT-NSFLY-ILDIL 106
Query: 234 DLFQ--PKYIILENVTGL-VHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNR 290
Q PKYI+LENV G V + ++Q + C YQ F +L + G+ SR R
Sbjct: 107 PRLQKLPKYILLENVKGFEVSSTRGLLIQTMEAC--GFQYQ-EF-LLSPSSLGIPNSRLR 162
Query: 291 VVILA 295
++A
Sbjct: 163 YFLIA 167
Score = 47 (21.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 550 RVLTVREYARAQGFPDSYVF--RGGICDMYKQIGNAV 584
R T +E A GFP + F + + Y+ +GN++
Sbjct: 341 RYFTPKEIANLLGFPPEFGFPEKTTVKQRYRLLGNSL 377
>TIGR_CMR|BA_3814 [details] [associations]
symbol:BA_3814 "prophage LambdaBa01, C-5 cytosine-specific
DNA methylase family protein" species:198094 "Bacillus anthracis
str. Ames" [GO:0006306 "DNA methylation" evidence=ISS] [GO:0009008
"DNA-methyltransferase activity" evidence=ISS] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006306 GO:GO:0008168
KO:K00558 PANTHER:PTHR10629 RefSeq:NP_846066.1 RefSeq:YP_020448.1
RefSeq:YP_029785.1 ProteinModelPortal:Q81XV4 IntAct:Q81XV4
REBASE:8252 DNASU:1086276 EnsemblBacteria:EBBACT00000012240
EnsemblBacteria:EBBACT00000016500 EnsemblBacteria:EBBACT00000022692
GeneID:1086276 GeneID:2818317 GeneID:2851296 KEGG:ban:BA_3814
KEGG:bar:GBAA_3814 KEGG:bat:BAS3531 HOGENOM:HOG000253230
OMA:LWPEMFR ProtClustDB:CLSK918198
BioCyc:BANT260799:GJAJ-3591-MONOMER
BioCyc:BANT261594:GJ7F-3706-MONOMER Uniprot:Q81XV4
Length = 259
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 52/194 (26%), Positives = 82/194 (42%)
Query: 115 DTPLKCLDLFSGCGGLMEGLCQAGVAKPCWSVELERSEAASYDANFQECSVIQDDCNLVL 174
++ LK LDL SG G+ AG+ + E+E N+ + D L+
Sbjct: 6 ESGLKMLDLCSGIAGISMAADWAGIDTAAFC-EIEEFNQKVLRKNYPNIPIFPDLYKLMK 64
Query: 175 KSLLKGHTQHKGVSLPQKHEVDLIVAGPPCQGFSQLNRARELEKSKLKNGLVFTFLSFCD 234
+SL+ G GV + + +I AG PCQG S + + R E + VF + +
Sbjct: 65 QSLIDG-----GVDVDS---IGVISAGYPCQGESLVGKRRGAEDERWLWPEVFRLIK--E 114
Query: 235 LFQPKYIILENVTGLVHFNKNEILQCIFHCLLKMNYQVTFDVLQSGNYGVAQSRNRVVIL 294
L +P + + ENV G V + +L L + NY V + + G R R I+
Sbjct: 115 L-RPTWFVGENVAGHVTMGLDTVLSD----LEEENYSTRTFVFPAVSVGAPHQRYRTFIV 169
Query: 295 A-SKPGYKLPSFPQ 307
S KL + P+
Sbjct: 170 GHSNDKSKLQTDPR 183
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 620 602 0.00086 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 623 (66 KB)
Total size of DFA: 380 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 50.92u 0.08s 51.00t Elapsed: 00:00:21
Total cpu time: 50.93u 0.08s 51.01t Elapsed: 00:00:22
Start: Thu Aug 15 11:08:35 2013 End: Thu Aug 15 11:08:57 2013