BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12305
(516 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/300 (70%), Positives = 254/300 (84%), Gaps = 9/300 (3%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+GTYATV+KGKS+LTDNLVALKEI+LEHEEGAPCTAIREVSLL++L+HANIVTLHDIIHT
Sbjct: 12 EGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT 71
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
EK LTLVFEYL+KDLK+Y+DDC NI++M+NVKLFLFQLLRGLAYCH +++LHRDLKPQNL
Sbjct: 72 EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL 131
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIF 370
LINERGELKLADFGLARAKS+PTKT+ NEVVTLWYRPPD+LLGST+YST IDM GVGCIF
Sbjct: 132 LINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191
Query: 371 HEMSSGRPLFPGSTIEDELRLICSILGPPPDE----LKSKLEFCITPVYPSESKLQLL-- 424
+EM++GRPLFPGST+E++L I ILG P +E + S EF T YP LL
Sbjct: 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK-TYNYPKYRAEALLSH 250
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSIFSLPHIKL 484
AP ++DSD DL+ K L ++ + RISA +AM+HP+F SLG ++H+L DT SIF+L I+L
Sbjct: 251 AP-RLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQL 309
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/103 (82%), Positives = 100/103 (97%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E+Y KLDKLG+GTYATV+KGKS+LTDNLVALKEI+LEHEEGAPCTAIREVSLL++L+HA
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 150 NIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVK 192
NIVTLHDIIHTEK LTLVFEYL+KDLK+Y+DDC NI++M+NVK
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK 103
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/281 (52%), Positives = 203/281 (72%), Gaps = 8/281 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY TVFK K+R T +VALK ++L+ + EG P +A+RE+ LL+EL+H NIV LHD++H
Sbjct: 12 EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
++K LTLVFE+ ++DLK+Y D C+ L VK FLFQLL+GL +CHSR +LHRDLKPQN
Sbjct: 72 SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN 131
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN GELKLA+FGLARA +P + +S EVVTLWYRPPDVL G+ YSTSIDM GCI
Sbjct: 132 LLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 370 FHEMS-SGRPLFPGSTIEDELRLICSILGPPPDELKSKL----EFCITPVYPSESKLQLL 424
F E++ +GRPLFPG+ ++D+L+ I +LG P +E + ++ P+YP+ + L +
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
P ++++ DL+Q L + QRISA A++HPYF+ P
Sbjct: 252 VP-KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
++ Y KL+K+G+GTY TVFK K+R T +VALK ++L+ + EG P +A+RE+ LL+EL+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKG 201
NIV LHD++H++K LTLVFE+ ++DLK+Y D C+ L VK + KG
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/281 (52%), Positives = 202/281 (71%), Gaps = 8/281 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY TVFK K+R T +VALK ++L+ + EG P +A+RE+ LL+EL+H NIV LHD++H
Sbjct: 12 EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
++K LTLVFE+ ++DLK+Y D C+ L VK FLFQLL+GL +CHSR +LHRDLKPQN
Sbjct: 72 SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN 131
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN GELKLADFGLARA +P + +S EVVTLWYRPPDVL G+ YSTSIDM GCI
Sbjct: 132 LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 370 FHEMS-SGRPLFPGSTIEDELRLICSILGPPPDELKSKL----EFCITPVYPSESKLQLL 424
F E++ + RPLFPG+ ++D+L+ I +LG P +E + ++ P+YP+ + L +
Sbjct: 192 FAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
P ++++ DL+Q L + QRISA A++HPYF+ P
Sbjct: 252 VP-KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
++ Y KL+K+G+GTY TVFK K+R T +VALK ++L+ + EG P +A+RE+ LL+EL+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKG 201
NIV LHD++H++K LTLVFE+ ++DLK+Y D C+ L VK + KG
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/284 (52%), Positives = 195/284 (68%), Gaps = 18/284 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
GTYATV+KG ++ T VALKE+KL+ EEG P TAIRE+SL++EL+H NIV L+D+IHTE
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE 75
Query: 253 KCLTLVFEYLEKDLKRYMD-----DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
LTLVFE+++ DLK+YMD + L +N VK F +QLL+GLA+CH +ILHRDLK
Sbjct: 76 NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
PQNLLIN+RG+LKL DFGLARA +P TFS+EVVTLWYR PDVL+GS YSTSID+
Sbjct: 136 PQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVY-------PSES 419
GCI EM +G+PLFPG+ E++L+LI I+G P + L + P Y P
Sbjct: 196 GCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV--TKLPKYNPNIQQRPPRD 253
Query: 420 KLQLLAP---EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
Q+L P E +D + +D + L + R+SA A+ HP+F
Sbjct: 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 91/131 (69%), Gaps = 6/131 (4%)
Query: 92 SYFK-LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
S FK L+KLG GTYATV+KG ++ T VALKE+KL+ EEG P TAIRE+SL++EL+H N
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 151 IVTLHDIIHTEKCLTLVFEYLEKDLKRYMD-----DCSNILSMNNVKGTYATVFKGKSRL 205
IV L+D+IHTE LTLVFE+++ DLK+YMD + L +N VK + +G +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 206 TDNLVALKEIK 216
+N + +++K
Sbjct: 125 HENKILHRDLK 135
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/286 (52%), Positives = 200/286 (69%), Gaps = 15/286 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K K +VALK I+L+ E EG P TAIRE+SLL+EL H NIV+L D+IH
Sbjct: 31 EGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+E+CLTLVFE++EKDLK+ +D+ L + +K++L+QLLRG+A+CH RILHRDLKPQN
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN 149
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN G LKLADFGLARA +P +++++EVVTLWYR PDVL+GS +YSTS+D+ +GCI
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI 209
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPP-PDELKSKLEFCITPVYPSESKLQLLAPEQ 428
F EM +G+PLFPG T +D+L I SILG P P E E P++ + Q+ +
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL---PLW-KQRTFQVFEKKP 265
Query: 429 MDS-------DALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQV 467
S + +DL+ L +D +RISA +AM HPYF L PQ+
Sbjct: 266 WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQI 311
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E Y KL+K+G+GTY V+K K +VALK I+L+ E EG P TAIRE+SLL+EL
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLT 206
H NIV+L D+IH+E+CLTLVFE++EKDLK+ +D+ L + +K + +G +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 207 DNLVALKEIK 216
+ + +++K
Sbjct: 137 QHRILHRDLK 146
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/286 (52%), Positives = 200/286 (69%), Gaps = 15/286 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K K +VALK I+L+ E EG P TAIRE+SLL+EL H NIV+L D+IH
Sbjct: 31 EGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+E+CLTLVFE++EKDLK+ +D+ L + +K++L+QLLRG+A+CH RILHRDLKPQN
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN 149
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN G LKLADFGLARA +P +++++EVVTLWYR PDVL+GS +YSTS+D+ +GCI
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI 209
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPP-PDELKSKLEFCITPVYPSESKLQLLAPEQ 428
F EM +G+PLFPG T +D+L I SILG P P E E P++ + Q+ +
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL---PLW-KQRTFQVFEKKP 265
Query: 429 MDS-------DALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQV 467
S + +DL+ L +D +RISA +AM HPYF L PQ+
Sbjct: 266 WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQI 311
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E Y KL+K+G+GTY V+K K +VALK I+L+ E EG P TAIRE+SLL+EL
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLT 206
H NIV+L D+IH+E+CLTLVFE++EKDLK+ +D+ L + +K + +G +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 207 DNLVALKEIK 216
+ + +++K
Sbjct: 137 QHRILHRDLK 146
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 146/279 (52%), Positives = 189/279 (67%), Gaps = 16/279 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H+NIV L+D+IH
Sbjct: 12 EGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
T+K L LVFE+L++DLK+ +D C L K FL QLL G+AYCH RR+LHRDLKPQN
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN GELK+ADFGLARA +P + +++EVVTLWYR PDVL+GS +YST+ID+ VGCI
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPP-----PD--EL-KSKLEFCITPVYPSESKL 421
F EM +G PLFPG + D+L I ILG P P+ EL K F + P ES L
Sbjct: 191 FAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ +D +DL+ K L D QRI+A A+ H YF
Sbjct: 251 K-----GLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E Y L+K+G+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
+NIV L+D+IHT+K L LVFE+L++DLK+ +D C L K + G + D
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 209 LVALKEIK 216
V +++K
Sbjct: 120 RVLHRDLK 127
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 146/279 (52%), Positives = 189/279 (67%), Gaps = 16/279 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H+NIV L+D+IH
Sbjct: 12 EGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
T+K L LVFE+L++DLK+ +D C L K FL QLL G+AYCH RR+LHRDLKPQN
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN GELK+ADFGLARA +P + +++EVVTLWYR PDVL+GS +YST+ID+ VGCI
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPP-----PD--EL-KSKLEFCITPVYPSESKL 421
F EM +G PLFPG + D+L I ILG P P+ EL K F + P ES L
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ +D +DL+ K L D QRI+A A+ H YF
Sbjct: 251 K-----GLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E Y L+K+G+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
+NIV L+D+IHT+K L LVFE+L++DLK+ +D C L K + G + D
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 209 LVALKEIK 216
V +++K
Sbjct: 120 RVLHRDLK 127
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 189/279 (67%), Gaps = 16/279 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H+NIV L+D+IH
Sbjct: 12 EGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
T+K L LVFE+L++DLK+ +D C L K FL QLL G+AYCH RR+LHRDLKPQN
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
LLIN GELK+ADFGLARA +P + +++E+VTLWYR PDVL+GS +YST+ID+ VGCI
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPP-----PD--EL-KSKLEFCITPVYPSESKL 421
F EM +G PLFPG + D+L I ILG P P+ EL K F + P ES L
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ +D +DL+ K L D QRI+A A+ H YF
Sbjct: 251 K-----GLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E Y L+K+G+GTY V+K ++ + ALK+I+LE E EG P T IRE+S+L+EL+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
+NIV L+D+IHT+K L LVFE+L++DLK+ +D C L K + G + D
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 209 LVALKEIK 216
V +++K
Sbjct: 120 RVLHRDLK 127
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS 183
NIV L D+IHTE L LVFE+L +DLK++MD +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 265 bits (676), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 80 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 139
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 199
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 200 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 259
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 260 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 304
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS 183
NIV L D+IHTE L LVFE+L +DLK++MD +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 103
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 74 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 253
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 254 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 94
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHA 149
E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 150 NIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/298 (47%), Positives = 196/298 (65%), Gaps = 9/298 (3%)
Query: 181 DCSNILSMNNV-KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELR 238
D N + + +GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 239 HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCH 297
H NIV L D+IHTE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CH
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 298 SRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
S R+LHRDLKPQNLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 358 YSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPV 414
YST++D+ +GCIF EM + R LFPG + D+L I LG P + + + P
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 415 YPSESKLQL--LAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
+P ++ + P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 245 FPKWARQDFSKVVPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 301
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 97
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 80 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 139
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 199
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 200 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 259
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 260 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 304
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 100
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 264 bits (674), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 76 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 96
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 75 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 254
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 255 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 95
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 75 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 254
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 255 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 95
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 74 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 253
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 254 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 94
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 17 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 77 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 136
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 196
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 197 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 256
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 257 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 301
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 97
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 76 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 86 GFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLR 144
G G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
EL H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 96
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 74 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 253
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 254 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 94
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GL++CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/277 (49%), Positives = 188/277 (67%), Gaps = 8/277 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
P +D D L+ + L YD +RISA A+ HP+F
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE++++DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 76 TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 86 GFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLR 144
G G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
EL H NIV L D+IHTE L LVFE++++DLK++MD
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMD 96
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VAL +I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 73 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VAL +I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 93
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VAL +I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VAL +I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 190/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK +MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 76 TENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 86 GFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLR 144
G G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
EL H NIV L D+IHTE L LVFE+L +DLK +MD
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMD 96
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKP+
Sbjct: 75 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 254
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 255 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 95
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKP+
Sbjct: 74 TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 253
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 254 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L +DLK++MD
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 94
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE++ +DLK +MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 72 TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+++EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 252 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE++ +DLK +MD
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMD 92
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 189/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L DLK +MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 75 TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 254
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 255 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L DLK +MD
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD 95
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKP+
Sbjct: 74 TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 253
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 254 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L DLK++MD
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD 94
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 189/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L DLK +MD + + + +K +LFQLL+GLA+CHS R+LHRDLKPQ
Sbjct: 76 TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L DLK +MD
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD 96
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L DLK++MD + + + +K +LFQLL+GLA+CHS R+LHRDLKP+
Sbjct: 76 TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 255
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 256 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLREL 146
G +E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H NIV L D+IHTE L LVFE+L DLK++MD
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD 96
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 8/286 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H NIV L D+IH
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TE L LVFE+L +DLK +MD + + + +K +LFQLL+GLA+CHS R+LHRDLKP+
Sbjct: 73 TENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLLIN G +KLADFGLARA VP +T+ +EVVTLWYR P++LLG YST++D+ +GC
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC--ITPVYPSESKLQL--L 424
IF EM + R LFPG + D+L I LG P + + + P +P ++ +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 252
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
P +D D L+ + L YD +RISA A+ HP+F + V L
Sbjct: 253 VPP-LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRH 148
+E++ K++K+G+GTY V+K +++LT +VALK+I+L+ E EG P TAIRE+SLL+EL H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
NIV L D+IHTE L LVFE+L +DLK +MD
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMD 93
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 20/285 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEE-GAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GTY V+K +T+ VA+K I+LEHEE G P TAIREVSLL+EL+H NI+ L +IH
Sbjct: 44 EGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH 103
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L L+FEY E DLK+YMD ++ SM +K FL+QL+ G+ +CHSRR LHRDLKPQN
Sbjct: 104 HNHRLHLIFEYAENDLKKYMDKNPDV-SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQN 162
Query: 311 LLIN-----ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LL++ E LK+ DFGLARA +P + F++E++TLWYRPP++LLGS YSTS+D+
Sbjct: 163 LLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIW 222
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL--------KSKLEFCITPVYP 416
+ CI+ EM PLFPG + D+L I +LG P D K F P +
Sbjct: 223 SIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSF---PKFR 279
Query: 417 SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++ ++L D L M D +RISA NA+ HPYF+
Sbjct: 280 GKTLKRVLGALLDDEGLDLLTAMLEM-DPVKRISAKNALEHPYFS 323
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE-GAPCTAIREVSLLRELRH 148
I+ Y ++ KLG+GTY V+K +T+ VA+K I+LEHEE G P TAIREVSLL+EL+H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKG 201
NI+ L +IH L L+FEY E DLK+YMD ++ SM +K + G
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDV-SMRVIKSFLYQLING 144
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 168/284 (59%), Gaps = 12/284 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAIREVSLLRELRHANIVTLHD 247
+G +ATV+K + + T+ +VA+K+IKL H ++G TA+RE+ LL+EL H NI+ L D
Sbjct: 20 EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD 79
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
+ ++LVF+++E DL+ + D S +L+ +++K ++ L+GL Y H ILHRDLK
Sbjct: 80 AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLK 139
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P NLL++E G LKLADFGLA++ P + + ++VVT WYR P++L G+ Y +DM V
Sbjct: 140 PNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAV 199
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI E+ P PG + D+L I LG P +E + C P Y + +
Sbjct: 200 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP--DMCSLPDYVTFKSFPGIPL 257
Query: 427 EQMDS----DALDLVQKFLMYDAKQRISAANAMRHPYF-NSLGP 465
+ S D LDL+Q +++ RI+A A++ YF N GP
Sbjct: 258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAIREVSLLR 144
R + Y KLD LG+G +ATV+K + + T+ +VA+K+IKL H ++G TA+RE+ LL+
Sbjct: 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSR 204
EL H NI+ L D + ++LVF+++E DL+ + D S +L+ +++K +G
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 205 LTDNLVALKEIK 216
L + + +++K
Sbjct: 128 LHQHWILHRDLK 139
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 170/286 (59%), Gaps = 17/286 (5%)
Query: 192 KGTYATVFKGKS-RLTDNLVALKEIKLE-HEEGAPCTAIREVSLLRELR---HANIVTLH 246
+G Y VFK + + VALK ++++ EEG P + IREV++LR L H N+V L
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 80
Query: 247 DIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRR 300
D+ + LTLVFE++++DL Y+D + +K +FQLLRGL + HS R
Sbjct: 81 DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 140
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
++HRDLKPQN+L+ G++KLADFGLAR S ++ VVTLWYR P+VLL S+ Y+T
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMALTSVVVTLWYRAPEVLLQSS-YAT 198
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES 419
+D+ VGCIF EM +PLF GS+ D+L I ++G P +E + + S+S
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS 258
Query: 420 KLQLLAPEQMDSDAL--DLVQKFLMYDAKQRISAANAMRHPYFNSL 463
Q + D D L DL+ K L ++ +RISA +A+ HPYF L
Sbjct: 259 A-QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 170/286 (59%), Gaps = 17/286 (5%)
Query: 192 KGTYATVFKGKS-RLTDNLVALKEIKLE-HEEGAPCTAIREVSLLRELR---HANIVTLH 246
+G Y VFK + + VALK ++++ EEG P + IREV++LR L H N+V L
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 80
Query: 247 DIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRR 300
D+ + LTLVFE++++DL Y+D + +K +FQLLRGL + HS R
Sbjct: 81 DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 140
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
++HRDLKPQN+L+ G++KLADFGLAR S ++ VVTLWYR P+VLL S+ Y+T
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMALTSVVVTLWYRAPEVLLQSS-YAT 198
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES 419
+D+ VGCIF EM +PLF GS+ D+L I ++G P +E + + S+S
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS 258
Query: 420 KLQLLAPEQMDSDAL--DLVQKFLMYDAKQRISAANAMRHPYFNSL 463
Q + D D L DL+ K L ++ +RISA +A+ HPYF L
Sbjct: 259 A-QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 169/284 (59%), Gaps = 17/284 (5%)
Query: 192 KGTYATVFKGKS-RLTDNLVALKEIKLE-HEEGAPCTAIREVSLLRELR---HANIVTLH 246
+G Y VFK + + VALK ++++ EEG P + IREV++LR L H N+V L
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 80
Query: 247 DIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRR 300
D+ + LTLVFE++++DL Y+D + +K +FQLLRGL + HS R
Sbjct: 81 DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 140
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
++HRDLKPQN+L+ G++KLADFGLAR S ++ VVTLWYR P+VLL S+ Y+T
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMALTSVVVTLWYRAPEVLLQSS-YAT 198
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES 419
+D+ VGCIF EM +PLF GS+ D+L I ++G P +E + + S+S
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS 258
Query: 420 KLQLLAPEQMDSDAL--DLVQKFLMYDAKQRISAANAMRHPYFN 461
Q + D D L DL+ K L ++ +RISA +A+ HPYF
Sbjct: 259 A-QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GT+ VFK + R T VALK++ +E+E EG P TA+RE+ +L+ L+H N+V L +I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 87
Query: 251 TE-----KC---LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
T+ +C + LVF++ E DL + + +++ +K + LL GL Y H +IL
Sbjct: 88 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKT----FSNEVVTLWYRPPDVLLGSTEY 358
HRD+K N+LI G LKLADFGLARA S+ + + N VVTLWYRPP++LLG +Y
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG-------PPPD--ELKSKLE 408
ID+ G GCI EM + P+ G+T + +L LI + G P D EL KLE
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ +L+ D ALDL+ K L+ D QRI + +A+ H +F S
Sbjct: 268 LVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GT+ VFK + R T VALK++ +E+E EG P TA+RE+ +L+ L+H N+V L +I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 87
Query: 251 TE-----KC---LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
T+ +C + LVF++ E DL + + +++ +K + LL GL Y H +IL
Sbjct: 88 TKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKT----FSNEVVTLWYRPPDVLLGSTEY 358
HRD+K N+LI G LKLADFGLARA S+ + + N VVTLWYRPP++LLG +Y
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG-------PPPD--ELKSKLE 408
ID+ G GCI EM + P+ G+T + +L LI + G P D EL KLE
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ +L+ D ALDL+ K L+ D QRI + +A+ H +F S
Sbjct: 268 LVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GT+ VFK + R T VALK++ +E+E EG P TA+RE+ +L+ L+H N+V L +I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 87
Query: 251 TE-----KC---LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
T+ +C + LVF++ E DL + + +++ +K + LL GL Y H +IL
Sbjct: 88 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKT----FSNEVVTLWYRPPDVLLGSTEY 358
HRD+K N+LI G LKLADFGLARA S+ + + N VVTLWYRPP++LLG +Y
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG-------PPPD--ELKSKLE 408
ID+ G GCI EM + P+ G+T + +L LI + G P D EL KLE
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ +L+ D ALDL+ K L+ D QRI + +A+ H +F S
Sbjct: 268 LVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+GT+ VFK + R T VALK++ +E+E EG P TA+RE+ +L+ L+H N+V L +I
Sbjct: 27 QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 86
Query: 251 TE-----KC---LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
T+ +C + LVF++ E DL + + +++ +K + LL GL Y H +IL
Sbjct: 87 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 146
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKT----FSNEVVTLWYRPPDVLLGSTEY 358
HRD+K N+LI G LKLADFGLARA S+ + + N VVTLWYRPP++LLG +Y
Sbjct: 147 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 206
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG-------PPPD--ELKSKLE 408
ID+ G GCI EM + P+ G+T + +L LI + G P D EL KLE
Sbjct: 207 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 266
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ +L+ D ALDL+ K L+ D QRI + +A+ H +F S
Sbjct: 267 LVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 167/282 (59%), Gaps = 16/282 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLRELR---HANIVTLHDI 248
G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H N+V L D+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 249 IHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRIL 302
T + +TLVFE++++DL+ Y+D L +K + Q LRGL + H+ I+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIV 134
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP+N+L+ G +KLADFGLAR S F VVTLWYR P+VLL ST Y+T +
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV-VVTLWYRAPEVLLQST-YATPV 192
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES-- 419
DM VGCIF EM +PLF G++ D+L I ++G PP++ + +P
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR 252
Query: 420 KLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+Q + PE +S A L+ + L ++ +RISA A++H Y +
Sbjct: 253 PVQSVVPEMEESGA-QLLLEMLTFNPHKRISAFRALQHSYLH 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLREL---RH 148
Y + ++G G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKGTYATVFKGK 202
N+V L D+ T + +TLVFE++++DL+ Y+D L +K +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 203 SRLTDNLVALKEIKLEH 219
L N + +++K E+
Sbjct: 126 DFLHANCIVHRDLKPEN 142
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 167/282 (59%), Gaps = 16/282 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLRELR---HANIVTLHDI 248
G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H N+V L D+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 249 IHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRIL 302
T + +TLVFE++++DL+ Y+D L +K + Q LRGL + H+ I+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIV 134
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP+N+L+ G +KLADFGLAR S + VVTLWYR P+VLL ST Y+T +
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSY-QMALAPVVVTLWYRAPEVLLQST-YATPV 192
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES-- 419
DM VGCIF EM +PLF G++ D+L I ++G PP++ + +P
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR 252
Query: 420 KLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+Q + PE +S A L+ + L ++ +RISA A++H Y +
Sbjct: 253 PVQSVVPEMEESGA-QLLLEMLTFNPHKRISAFRALQHSYLH 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLREL---RH 148
Y + ++G G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKGTYATVFKGK 202
N+V L D+ T + +TLVFE++++DL+ Y+D L +K +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 203 SRLTDNLVALKEIKLEH 219
L N + +++K E+
Sbjct: 126 DFLHANCIVHRDLKPEN 142
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 166/282 (58%), Gaps = 16/282 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLRELR---HANIVTLHDI 248
G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H N+V L D+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 249 IHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRIL 302
T + +TLVFE++++DL+ Y+D L +K + Q LRGL + H+ I+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIV 134
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP+N+L+ G +KLADFGLAR S VVTLWYR P+VLL ST Y+T +
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSY-QMALDPVVVTLWYRAPEVLLQST-YATPV 192
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSES-- 419
DM VGCIF EM +PLF G++ D+L I ++G PP++ + +P
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR 252
Query: 420 KLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+Q + PE +S A L+ + L ++ +RISA A++H Y +
Sbjct: 253 PVQSVVPEMEESGA-QLLLEMLTFNPHKRISAFRALQHSYLH 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH-EEGAPCTAIREVSLLREL---RH 148
Y + ++G G Y TV+K + + + VALK +++ + EEG P + +REV+LLR L H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKGTYATVFKGK 202
N+V L D+ T + +TLVFE++++DL+ Y+D L +K +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 203 SRLTDNLVALKEIKLEH 219
L N + +++K E+
Sbjct: 126 DFLHANCIVHRDLKPEN 142
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 165/285 (57%), Gaps = 19/285 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGA----PCTAIREVSLLRELR---HANIVTL 245
G Y TV+K + + + VALK +++ + G P + +REV+LLR L H N+V L
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79
Query: 246 HDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSR 299
D+ T + +TLVFE++++DL+ Y+D L +K + Q LRGL + H+
Sbjct: 80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 139
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYS 359
I+HRDLKP+N+L+ G +KLADFGLAR S + VVTLWYR P+VLL ST Y+
Sbjct: 140 CIVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALTPVVVTLWYRAPEVLLQST-YA 197
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
T +DM VGCIF EM +PLF G++ D+L I ++G PP++ + +P
Sbjct: 198 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPR 257
Query: 419 S--KLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+Q + PE +S A L+ + L ++ +RISA A++H Y +
Sbjct: 258 GPRPVQSVVPEMEESGA-QLLLEMLTFNPHKRISAFRALQHSYLH 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGA----PCTAIREVSLLREL-- 146
Y + ++G G Y TV+K + + + VALK +++ + G P + +REV+LLR L
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 147 -RHANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNI-LSMNNVKGTYATVF 199
H N+V L D+ T + +TLVFE++++DL+ Y+D L +K
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 200 KGKSRLTDNLVALKEIKLEH 219
+G L N + +++K E+
Sbjct: 131 RGLDFLHANCIVHRDLKPEN 150
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 32/304 (10%)
Query: 180 DDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLREL 237
D+ I ++ N G Y V + RLT VA+K+I + A T +RE+ +L+
Sbjct: 54 DEYEIIETIGN--GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHF 110
Query: 238 RHANIVTLHDIIHTE------KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLR 291
+H NI+ + DI+ K + +V + +E DL + + S L++ +V+ FL+QLLR
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTLEHVRYFLYQLLR 169
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA---KSVPTKTFSNE-VVTLWYR 347
GL Y HS +++HRDLKP NLL+NE ELK+ DFG+AR + F E V T WYR
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 348 PPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSK 406
P+++L EY+ +ID+ VGCIF EM + R LFPG +L+LI +LG P +
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289
Query: 407 LEFCITPVYPSESKLQLLAPEQ----------MDSDALDLVQKFLMYDAKQRISAANAMR 456
+ Y +Q L P Q D AL L+ + L ++ RISAA A+R
Sbjct: 290 VGAERVRAY-----IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 457 HPYF 460
HP+
Sbjct: 345 HPFL 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 84 EIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVS 141
++ F + Y ++ +G G Y V + RLT VA+K+I + A T +RE+
Sbjct: 47 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELK 105
Query: 142 LLRELRHANIVTLHDIIHTE------KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTY 195
+L+ +H NI+ + DI+ K + +V + +E DL + + S L++ +V+
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFL 164
Query: 196 ATVFKGKSRLTDNLVALKEIK 216
+ +G + V +++K
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLK 185
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 32/304 (10%)
Query: 180 DDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLREL 237
D+ I ++ N G Y V + RLT VA+K+I + A T +RE+ +L+
Sbjct: 55 DEYEIIETIGN--GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHF 111
Query: 238 RHANIVTLHDIIHTE------KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLR 291
+H NI+ + DI+ K + +V + +E DL + + S L++ +V+ FL+QLLR
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLR 170
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA---KSVPTKTFSNE-VVTLWYR 347
GL Y HS +++HRDLKP NLL+NE ELK+ DFG+AR + F E V T WYR
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 348 PPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSK 406
P+++L EY+ +ID+ VGCIF EM + R LFPG +L+LI +LG P +
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 290
Query: 407 LEFCITPVYPSESKLQLLAPEQ----------MDSDALDLVQKFLMYDAKQRISAANAMR 456
+ Y +Q L P Q D AL L+ + L ++ RISAA A+R
Sbjct: 291 VGAERVRAY-----IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 457 HPYF 460
HP+
Sbjct: 346 HPFL 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 84 EIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVS 141
++ F + Y ++ +G G Y V + RLT VA+K+I + A T +RE+
Sbjct: 48 DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELK 106
Query: 142 LLRELRHANIVTLHDIIHTE------KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTY 195
+L+ +H NI+ + DI+ K + +V + +E DL + + S L++ +V+
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFL 165
Query: 196 ATVFKGKSRLTDNLVALKEIK 216
+ +G + V +++K
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLK 186
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 161/285 (56%), Gaps = 17/285 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKE-IKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G+Y V K +++ T +VA+K+ ++ + ++ A+RE+ LL++LRH N+V L ++
Sbjct: 35 EGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK 94
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+K LVFE+++ + ++ N L V+ +LFQ++ G+ +CHS I+HRD+KP+N
Sbjct: 95 KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPEN 154
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCI 369
+L+++ G +KL DFG AR + P + + +EV T WYR P++L+G +Y ++D+ +GC+
Sbjct: 155 ILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL 214
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILG---PPPDELKSKLEFCITPVYPSESKLQLLAP 426
EM G PLFPG + D+L I LG P EL +K PV+ ++
Sbjct: 215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK-----NPVFAGVRLPEIKER 269
Query: 427 E-------QMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLG 464
E ++ +DL +K L D +R A + H +F G
Sbjct: 270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 87 FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKE-IKLEHEEGAPCTAIREVSLLRE 145
F +E Y L +G+G+Y V K +++ T +VA+K+ ++ + ++ A+RE+ LL++
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLE 172
LRH N+V L ++ +K LVFE+++
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVD 107
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 156/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + C + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK-CQH-LSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 38 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 96
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 97 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 154
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 214
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 215 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 273
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 274 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 88
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDL 112
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 39 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 97
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 98 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 155
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 156 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 215
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 216 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 274
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 275 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 89
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDL 113
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 30 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 88
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 89 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 147 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 206
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 207 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 265
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 266 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 80
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDL 104
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 31 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 89
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 90 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 147
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 208 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 266
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 267 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 81
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDL 105
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 35 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENIIGINDIIR 93
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 152 LKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 212 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKAR-NYLLSLP 270
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 271 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENI 85
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL 109
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 31 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 89
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 90 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 147
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 208 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKAR-NYLLSLP 266
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 267 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 81
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDL 105
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 38 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 96
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 97 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 154
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T V T WYR P+++L S Y+ SI
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI 214
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 215 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 273
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 274 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 88
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDL 112
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 33 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 91
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 149
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 150 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 210 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKAR-NYLLSLP 268
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 269 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 83
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL 107
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 33 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 91
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 149
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 150 LKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 210 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKAR-NYLLSLP 268
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 269 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 83
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL 107
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 159/285 (55%), Gaps = 19/285 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDII 249
+G+Y VFK ++R T +VA+K+ LE E+ A+RE+ +L++L+H N+V L ++
Sbjct: 13 EGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF 71
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ L LVFEY + + +D + + VK +Q L+ + +CH +HRD+KP+
Sbjct: 72 RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPE 131
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+LI + +KL DFG AR + P+ + +EV T WYR P++L+G T+Y +D+ +GC
Sbjct: 132 NILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGC 191
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+F E+ SG PL+PG + D+L LI LG D + + T Y S K+ PE
Sbjct: 192 VFAELLSGVPLWPGKSDVDQLYLIRKTLG---DLIPRHQQVFSTNQYFSGVKIP--DPED 246
Query: 429 MDS----------DALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
M+ AL L++ L D +R++ + HPYF ++
Sbjct: 247 MEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELR 147
+E Y K+ K+G+G+Y VFK ++R T +VA+K+ LE E+ A+RE+ +L++L+
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLK 60
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMD 180
H N+V L ++ ++ L LVFEY + + +D
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELD 93
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 33 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 91
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 149
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 150 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 210 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 268
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 269 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 83
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL 107
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V L VA+++I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 37 EGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 95
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 272
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 273 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V L VA+++I EH+ T +RE+ +L RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT-LREIKILLRFRHENI 87
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDL 111
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 35 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 93
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 212 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 270
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 271 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 85
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL 109
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 41 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 99
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 100 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 157
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 158 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 217
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 218 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 276
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 277 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 91
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDL 115
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 33 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 91
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 149
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 210 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 268
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 269 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 83
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL 107
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 33 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 91
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 149
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 210 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 268
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 269 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 83
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL 107
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 35 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENIIGINDIIR 93
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 212 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 270
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 271 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENI 85
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL 109
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 28/289 (9%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH N++ + DI+
Sbjct: 53 EGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT-LREIQILLRFRHENVIGIRDILR 111
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ + +V + +E DL + + S LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 112 ASTLEAMRDVYIVQDLMETDLYKLLK--SQQLSNDHICYFLYQILRGLKYIHSANVLHRD 169
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLLIN +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 170 LKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSI 229
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPV------- 414
D+ VGCI EM S RP+FPG D+L I ILG P E + CI +
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN----CIINMKARNYLQ 285
Query: 415 -YPSESKLQL--LAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
PS++K+ L P+ DS ALDL+ + L ++ +RI+ A+ HPY
Sbjct: 286 SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y +L +G+G Y V + VA+K+I EH+ T +RE+ +L RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT-LREIQILLRFRHENV 103
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ + DI+ + Y+ +DL
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDL 127
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 53 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 111
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + +V + +E DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 112 APTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 169
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 170 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 229
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 288
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 289 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 103
Query: 152 VTLHDIIHTEKCLTLVFEYLEKDL 175
+ ++DII + Y+ +DL
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDL 127
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
+G Y V + VA+K+I EH+ T +RE+ +L RH NI+ ++DII
Sbjct: 53 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIR 111
Query: 251 TE-----KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
K + LV + DL + + + LS +++ FL+Q+LRGL Y HS +LHRD
Sbjct: 112 APTIEQMKDVYLVTHLMGADLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSANVLHRD 169
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP---TKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP NLL+N +LK+ DFGLAR T + V T WYR P+++L S Y+ SI
Sbjct: 170 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 229
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE-------LKSKLEFCITPV 414
D+ VGCI EM S RP+FPG D+L I ILG P E LK++ + ++
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR-NYLLSLP 288
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ ++ L P DS ALDL+ K L ++ +RI A+ HPY
Sbjct: 289 HKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIK-LEHEEGAPCTAIREVSLLRELRHANI 151
Y L +G+G Y V + VA+K+I EH+ T +RE+ +L RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENI 103
Query: 152 VTLHDII 158
+ ++DII
Sbjct: 104 IGINDII 110
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 37/306 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
G Y V T VA+K++ + E A RE+ LL+ +RH N++ L D+
Sbjct: 36 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTP 95
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
++ L LV ++ DL + M L + ++ ++Q+L+GL Y H+ I+HRD
Sbjct: 96 DETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD 153
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR VVT WYR P+V+L Y+ ++D+
Sbjct: 154 LKPGNLAVNEDCELKILDFGLARQAD---SEMXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
VGCI EM +G+ LF GS D+L+ I + G PP E +L+ E+K +
Sbjct: 211 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ-------SDEAKNYMK 263
Query: 425 A-PEQMDSD-----------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLG-----PQV 467
PE D A++L++K L+ DA+QR++A A+ HPYF SL PQV
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV 323
Query: 468 HELSDT 473
+ D+
Sbjct: 324 QKYDDS 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 72 PLTRSS-RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHE 129
P RS RQ +++ + Y L +G G Y V T VA+K++ +
Sbjct: 5 PPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS 64
Query: 130 EGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYM 179
E A RE+ LL+ +RH N++ L D+ ++ L LV ++ DL + M
Sbjct: 65 ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM 120
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 181/337 (53%), Gaps = 52/337 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELR-HANIVTLHDI 248
KG Y V+K R T +VA+K+I ++ A T RE+ +L EL H NIV L ++
Sbjct: 19 KGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT-FREIMILTELSGHENIVNLLNV 77
Query: 249 IH--TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ ++ + LVF+Y+E DL + +NIL + + ++QL++ + Y HS +LHRD+
Sbjct: 78 LRADNDRDVYLVFDYMETDLHAVIR--ANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDM 135
Query: 307 KPQNLLINERGELKLADFGLARA--------KSVP------TKTFSNE-------VVTLW 345
KP N+L+N +K+ADFGL+R+ ++P T+ F ++ V T W
Sbjct: 136 KPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 346 YRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELK 404
YR P++LLGST+Y+ IDM +GCI E+ G+P+FPGS+ ++L I ++ P +E
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255
Query: 405 SKLE--FCITPVYPSESKLQLLAPEQMD-------------------SDALDLVQKFLMY 443
++ F T + + K+++ + D +ALDL+ K L +
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315
Query: 444 DAKQRISAANAMRHPYFNSLGPQVHELSDTQSIFSLP 480
+ +RISA +A++HP F S+ +E + I ++P
Sbjct: 316 NPNKRISANDALKHP-FVSIFHNPNEEPNCDHIITIP 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 88 GRIE-----SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREV 140
GR++ Y + KLG+G Y V+K R T +VA+K+I ++ A T RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT-FREI 59
Query: 141 SLLRELR-HANIVTLHDIIH--TEKCLTLVFEYLEKDL 175
+L EL H NIV L +++ ++ + LVF+Y+E DL
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDL 97
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 160/298 (53%), Gaps = 34/298 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V + T +VA+K+I+ + +RE+ +L+ +H NI+T+ +I
Sbjct: 21 EGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRP 80
Query: 252 EKC-----LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + ++ E ++ DL R + + +LS ++++ F++Q LR + H ++HRDL
Sbjct: 81 DSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 307 KPQNLLINERGELKLADFGLARA-------KSVPT---KTFSNEVVTLWYRPPDVLLGST 356
KP NLLIN +LK+ DFGLAR S PT + V T WYR P+V+L S
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSA 198
Query: 357 EYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT--- 412
+YS ++D+ GCI E+ RP+FPG +L LI I+G P + + CI
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR---CIESPR 255
Query: 413 --------PVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
P+YP+ + L+ + P +++ +DL+Q+ L++D +RI+A A+ HPY +
Sbjct: 256 AREYIKSLPMYPA-APLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 90 IESYFKLDKL-GQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRH 148
I S F+L L G+G Y V + T +VA+K+I+ + +RE+ +L+ +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNILSMNNVK 192
NI+T+ +I + + ++ E ++ DL R + + +LS ++++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQ 115
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 160/298 (53%), Gaps = 34/298 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V + T +VA+K+I+ + +RE+ +L+ +H NI+T+ +I
Sbjct: 21 EGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRP 80
Query: 252 EKC-----LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + ++ E ++ DL R + + +LS ++++ F++Q LR + H ++HRDL
Sbjct: 81 DSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 307 KPQNLLINERGELKLADFGLARA-------KSVPT---KTFSNEVVTLWYRPPDVLLGST 356
KP NLLIN +LK+ DFGLAR S PT + V T WYR P+V+L S
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSA 198
Query: 357 EYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT--- 412
+YS ++D+ GCI E+ RP+FPG +L LI I+G P + + CI
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR---CIESPR 255
Query: 413 --------PVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
P+YP+ + L+ + P +++ +DL+Q+ L++D +RI+A A+ HPY +
Sbjct: 256 AREYIKSLPMYPA-APLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 90 IESYFKLDKL-GQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRH 148
I S F+L L G+G Y V + T +VA+K+I+ + +RE+ +L+ +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKR 177
NI+T+ +I + + ++ E ++ DL R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR 102
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 160/298 (53%), Gaps = 34/298 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V + T +VA+K+I+ + +RE+ +L+ +H NI+T+ +I
Sbjct: 21 EGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRP 80
Query: 252 EKC-----LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + ++ E ++ DL R + + +LS ++++ F++Q LR + H ++HRDL
Sbjct: 81 DSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDL 138
Query: 307 KPQNLLINERGELKLADFGLARA-------KSVPTKTFSNE---VVTLWYRPPDVLLGST 356
KP NLLIN +LK+ DFGLAR S PT S V T WYR P+V+L S
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 357 EYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT--- 412
+YS ++D+ GCI E+ RP+FPG +L LI I+G P + + CI
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR---CIESPR 255
Query: 413 --------PVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
P+YP+ + L+ + P +++ +DL+Q+ L++D +RI+A A+ HPY +
Sbjct: 256 AREYIKSLPMYPA-APLEKMFP-RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 90 IESYFKLDKL-GQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRH 148
I S F+L L G+G Y V + T +VA+K+I+ + +RE+ +L+ +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 149 ANIVTLHDIIHTEKC-----LTLVFEYLEKDLKRYMDDCSNILSMNNVK 192
NI+T+ +I + + ++ E ++ DL R + + +LS ++++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQ 115
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 158/313 (50%), Gaps = 28/313 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
G Y +V + + VA+K++ + E A RE+ LL+ ++H N++ L D+
Sbjct: 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 112
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
L LV +++ DL++ M S ++ ++Q+L+GL Y HS ++HRD
Sbjct: 113 ASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + VVT WYR P+V+L Y+ ++D+
Sbjct: 170 LKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIW 226
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE-------FCITPVYPS 417
VGCI EM +G+ LF G D+L I + G P E KL P P
Sbjct: 227 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVHELSDTQSI 476
+ QL + A DL++K L D +R++AA A+ HP+F P+ E ++ Q
Sbjct: 287 KDFTQLFP--RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE--EETEAQQP 342
Query: 477 F--SLPHIKLTSN 487
F SL H KLT +
Sbjct: 343 FDDSLEHEKLTVD 355
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAI 137
+Q +++ + ++Y +G G Y +V + + VA+K++ + E A
Sbjct: 30 KQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY 89
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKRYM 179
RE+ LL+ ++H N++ L D+ L LV +++ DL++ M
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM 137
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 158/313 (50%), Gaps = 28/313 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
G Y +V + + VA+K++ + E A RE+ LL+ ++H N++ L D+
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 94
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
L LV +++ DL++ M S ++ ++Q+L+GL Y HS ++HRD
Sbjct: 95 ASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + VVT WYR P+V+L Y+ ++D+
Sbjct: 152 LKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIW 208
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVY-------PS 417
VGCI EM +G+ LF G D+L I + G P E KL Y P
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVHELSDTQSI 476
+ QL + A DL++K L D +R++AA A+ HP+F P+ E ++ Q
Sbjct: 269 KDFTQLFP--RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE--EETEAQQP 324
Query: 477 F--SLPHIKLTSN 487
F SL H KLT +
Sbjct: 325 FDDSLEHEKLTVD 337
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE-EGAPCTAI 137
+Q +++ + ++Y +G G Y +V + + VA+K++ + E A
Sbjct: 12 KQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY 71
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKRYM 179
RE+ LL+ ++H N++ L D+ L LV +++ DL++ M
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM 119
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR F V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 160/301 (53%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C+ L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVK-CAK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 255
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 311
Query: 472 D 472
D
Sbjct: 312 D 312
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 6 RQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSL 92
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR F V T WYR P+++L Y+ ++D+
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 255
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 311
Query: 472 D 472
D
Sbjct: 312 D 312
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSL 92
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 255
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 311
Query: 472 D 472
D
Sbjct: 312 D 312
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSL 92
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 43 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 102
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 103 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 160
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 161 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 217
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 218 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 269
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 270 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 325
Query: 472 D 472
D
Sbjct: 326 D 326
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 20 RQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 79
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSL 106
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 31/261 (11%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ L+H N++ L D+ + LV + DL + S LS +V
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--SQALSDEHV 133
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++QLLRGL Y HS I+HRDLKP N+ +NE EL++ DFGLAR + + V
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYVA 190
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ G+ LFPGS D+L+ I ++G P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQMDSD---------ALDLVQKFLMYDAKQRISA 451
E+ +K+ Y +Q L P Q D A+DL+ + L+ D+ QR+SA
Sbjct: 251 EVLAKISSEHARTY-----IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSA 305
Query: 452 ANAMRHPYFNSLGPQVHELSD 472
A A+ H YF+ Q H+ D
Sbjct: 306 AEALAHAYFS----QYHDPED 322
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 111
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 112 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 227 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 278
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 279 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 334
Query: 472 D 472
D
Sbjct: 335 D 335
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 29 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 88
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSL 115
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 113 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 279
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 280 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 335
Query: 472 D 472
D
Sbjct: 336 D 336
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSL 116
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 158/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 113 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR V T WYR P+++L Y+ ++D+
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTD---DEMXGXVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 279
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 280 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 335
Query: 472 D 472
D
Sbjct: 336 D 336
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSL 116
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 99 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESK---L 421
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 265
Query: 422 QLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
Q LA P+ ++ A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 266 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 321
Query: 472 D 472
D
Sbjct: 322 D 322
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 75
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSL 102
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 155/301 (51%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR F V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 425 AP-EQM------------DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
QM + A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 129
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD---DEMTGYVA 186
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 247 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 299 ITAAQALAHAYF----AQYHDPDD 318
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSL 98
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 133
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD---DEMTGYVA 190
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 251 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 303 ITAAQALAHAYF----AQYHDPDD 322
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSL 102
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L + Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 31/261 (11%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFE-YLEKDLKRYMDDCSNI-----LSMNNV 282
RE+ LL+ L+H N++ L D+ + E YL L D +NI LS +V
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG--ADLNNIVKCQALSDEHV 133
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++QLLRGL Y HS I+HRDLKP N+ +NE EL++ DFGLAR + + V
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYVA 190
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ G+ LFPGS D+L+ I ++G P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQMDSD---------ALDLVQKFLMYDAKQRISA 451
E+ +K+ Y +Q L P Q D A+DL+ + L+ D+ QR+SA
Sbjct: 251 EVLAKISSEHARTY-----IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSA 305
Query: 452 ANAMRHPYFNSLGPQVHELSD 472
A A+ H YF+ Q H+ D
Sbjct: 306 AEALAHAYFS----QYHDPED 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 134
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + + V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVA 191
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 252 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 304 ITAAQALAHAYF----AQYHDPDD 323
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSL 103
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 138
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD---DEMTGYVA 195
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 256 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 308 ITAAQALAHAYF----AQYHDPDD 327
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 21 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSL 107
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 132
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD---DEMTGYVA 189
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 250 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 302 ITAAQALAHAYF----AQYHDPDD 321
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSL 101
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 134
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + + V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVA 191
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 252 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 304 ITAAQALAHAYF----AQYHDPDD 323
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSL 103
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 134
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + + V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVA 191
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 252 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 304 ITAAQALAHAYF----AQYHDPDD 323
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSL 103
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 154/301 (51%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGXVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 425 AP-EQM------------DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
QM + A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 132
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD---DEMTGYVA 189
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 250 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 302 ITAAQALAHAYF----AQYHDPDD 321
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 15 RQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSL 101
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 138
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 195
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 256 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 308 ITAAQALAHAYF----AQYHDPDD 327
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 21 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSL 107
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 129
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 186
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 247 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 299 ITAAQALAHAYF----AQYHDPDD 318
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSL 98
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 129
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 186
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 247 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 299 ITAAQALAHAYF----AQYHDPDD 318
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSL 98
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 139
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 196
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 257 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 309 ITAAQALAHAYF----AQYHDPDD 328
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSL 108
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 139
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 196
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 257 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 309 ITAAQALAHAYF----AQYHDPDD 328
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSL 108
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 139
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 196
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 257 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 309 ITAAQALAHAYF----AQYHDPDD 328
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI- 137
RQ L++ + E Y L +G G Y +V T VA+K++ P +I
Sbjct: 22 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL------SKPFQSII 75
Query: 138 ------REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 108
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 124
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 181
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 242 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 294 ITAAQALAHAYF----AQYHDPDD 313
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 7 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSL 93
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 145/261 (55%), Gaps = 31/261 (11%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ L LV + DL + C L+ ++V
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 156
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 213
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ ++L+ I + G PP
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 402 ELKSKLEFCITPVYPSESKLQLLA--PEQMDSD--------ALDLVQKFLMYDAKQRISA 451
+ S++ P + + + + L P++ +D A+DL++K L+ D +RI+A
Sbjct: 274 SVISRM-----PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITA 328
Query: 452 ANAMRHPYFNSLGPQVHELSD 472
+ A+ HPYF+ Q H+ D
Sbjct: 329 SEALAHPYFS----QYHDPDD 345
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 61 SFLAKTNIIDAPLTRSSR------RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRL 114
S K AP T S + RQ L++ + E Y L +G G Y +V
Sbjct: 15 SLYKKAGSAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVK 74
Query: 115 TDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDII 158
+ +A+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 75 SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 119
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 133
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 190
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 251 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 303 ITAAQALAHAYF----AQYHDPDD 322
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSL 102
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 150
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 207
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 268 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 320 ITAAQALAHAYF----AQYHDPDD 339
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 33 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSL 119
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 154/301 (51%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DFGLAR + V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 425 AP-EQM------------DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
QM + A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 124
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 181
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 242 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 294 ITAAQALAHAYF----AQYHDPDD 313
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 7 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSL 93
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--XQKLTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 134
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 191
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 252 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 304 ITAAQALAHAYF----AQYHDPDD 323
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSL 103
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 133
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 190
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 251 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 303 ITAAQALAHAYF----AQYHDPDD 322
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 16 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSL 102
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 123
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 180
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 241 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 293 ITAAQALAHAYF----AQYHDPDD 312
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 65
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSL 92
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + S L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--SQKLTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGL R + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 132
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 189
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 250 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 302 ITAAQALAHAYF----AQYHDPDD 321
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSL 101
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 129
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 186
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 247 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 299 ITAAQALAHAYF----AQYHDPDD 318
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 12 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSL 98
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 125
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 182
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 242
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 243 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 294
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 295 ITAAQALAHAYF----AQYHDPDD 314
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 8 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 67
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSL 94
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 132
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 189
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 250 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 302 ITAAQALAHAYF----AQYHDPDD 321
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 15 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSL 101
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 126
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 183
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 243
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 244 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 295
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 296 ITAAQALAHAYF----AQYHDPDD 315
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 9 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 68
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSL 95
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 147
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 204
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 265 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 316
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 317 ITAAQALAHAYF----AQYHDPDD 336
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 30 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 89
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSL 116
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 146
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 203
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 264 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 315
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 316 ITAAQALAHAYF----AQYHDPDD 335
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 29 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 88
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSL 115
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 31/261 (11%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFE-YLEKDLKRYMDDCSNI-----LSMNNV 282
RE+ LL+ L+H N++ L D+ + E YL L D +NI LS +V
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG--ADLNNIVKCQALSDEHV 125
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++QLLRGL Y HS I+HRDLKP N+ +NE EL++ DFGLAR + + V
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD---EEMTGYVA 182
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ G+ LFPGS D+L+ I ++G P
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 242
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQMDSD---------ALDLVQKFLMYDAKQRISA 451
E+ +K+ Y +Q L P Q D A+DL+ + L+ D+ QR+SA
Sbjct: 243 EVLAKISSEHARTY-----IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSA 297
Query: 452 ANAMRHPYFNSLGPQVHELSD 472
A A+ H YF+ Q H+ D
Sbjct: 298 AEALAHAYFS----QYHDPED 314
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 150
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VA 207
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 268 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 320 ITAAQALAHAYF----AQYHDPDD 339
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 33 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSL 119
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--XQKLTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ DFGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 142/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ D+GLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 154/301 (51%), Gaps = 38/301 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G Y +V T + VA+K++ + RE+ LL+ ++H N++ L D+
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV + DL + C L+ ++V+ ++Q+LRGL Y HS I+HRD
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP NL +NE ELK+ DF LAR + V T WYR P+++L Y+ ++D+
Sbjct: 151 LKPSNLAVNEDCELKILDFYLARHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
VGCI E+ +GR LFPG+ D+L+LI ++G P EL K+ SES +
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS--------SESARNYI 259
Query: 425 AP-EQM------------DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
QM + A+DL++K L+ D+ +RI+AA A+ H YF Q H+
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF----AQYHDPD 315
Query: 472 D 472
D
Sbjct: 316 D 316
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T + VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 44/310 (14%)
Query: 192 KGTYATVFKGKSRLTDNL--VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+GTY V+K K + + ALK+I+ G +A RE++LLREL+H N+++L +
Sbjct: 31 RGTYGHVYKAKRKDGKDDKDYALKQIE---GTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 250 --HTEKCLTLVFEYLEKDL----KRYMDDCSNI----LSMNNVKLFLFQLLRGLAYCHSR 299
H ++ + L+F+Y E DL K + +N L VK L+Q+L G+ Y H+
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 300 RILHRDLKPQNLLI----NERGELKLADFGLARAKSVPTKTFSN---EVVTLWYRPPDVL 352
+LHRDLKP N+L+ ERG +K+AD G AR + P K ++ VVT WYR P++L
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 353 LGSTEYSTSIDM-GVGCIFHEMSSGRPLF---------PGSTIEDELRLICSILGPPPD- 401
LG+ Y+ +ID+ +GCIF E+ + P+F D+L I +++G P D
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK 267
Query: 402 ---ELKSKLEFCI------TPVYPSESKLQLLAPEQM--DSDALDLVQKFLMYDAKQRIS 450
++K E Y + S ++ + ++ DS A L+QK L D +RI+
Sbjct: 268 DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327
Query: 451 AANAMRHPYF 460
+ AM+ PYF
Sbjct: 328 SEQAMQDPYF 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 89 RIESYFKLD--KLGQGTYATVFKGKSRLTDNL--VALKEIKLEHEEGAPCTAIREVSLLR 144
R+E F+ + K+G+GTY V+K K + + ALK+I+ G +A RE++LLR
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE---GTGISMSACREIALLR 73
Query: 145 ELRHANIVTLHDII--HTEKCLTLVFEYLEKDL 175
EL+H N+++L + H ++ + L+F+Y E DL
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL 106
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ FGLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ D GLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ D GLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 141/264 (53%), Gaps = 37/264 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMNNV 282
RE+ LL+ ++H N++ L D+ + L LV + DL + C L+ ++V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQK-LTDDHV 127
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV 342
+ ++Q+LRGL Y HS I+HRDLKP NL +NE ELK+ D GLAR + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD---DEMTGYVA 184
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPD 401
T WYR P+++L Y+ ++D+ VGCI E+ +GR LFPG+ D+L+LI ++G P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 402 ELKSKLEFCITPVYPSESKLQLLAP-EQM------------DSDALDLVQKFLMYDAKQR 448
EL K+ SES + QM + A+DL++K L+ D+ +R
Sbjct: 245 ELLKKIS--------SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 449 ISAANAMRHPYFNSLGPQVHELSD 472
I+AA A+ H YF Q H+ D
Sbjct: 297 ITAAQALAHAYF----AQYHDPDD 316
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 79 RQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AI 137
RQ L++ + E Y L +G G Y +V T VA+K++ +
Sbjct: 10 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 138 REVSLLRELRHANIVTLHDIIHTEKCL 164
RE+ LL+ ++H N++ L D+ + L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSL 96
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 155/291 (53%), Gaps = 33/291 (11%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ VF+ K +D VA+K++ + RE+ ++R ++H N+V L ++
Sbjct: 51 GSFGVVFQAKLVESDE-VAIKKVLQDKRFKN-----RELQIMRIVKHPNVVDLKAFFYSN 104
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV EY+ + + R+ + M +KL+++QLLR LAY HS I H
Sbjct: 105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICH 164
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ G LKL DFG A+ S + + +YR P+++ G+T Y+T+I
Sbjct: 165 RDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS-XICSRYYRAPELIFGATNYTTNI 223
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP-DELKSKLEFCITPVYPSESK 420
D+ GC+ E+ G+PLFPG + D+L I +LG P +++K+ + P Y E K
Sbjct: 224 DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT-----MNPNY-MEHK 277
Query: 421 LQLLAPEQMDS--------DALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
+ P DA+DL+ + L Y R++A A+ HP+F+ L
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 64 AKTNIIDAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKE 123
K N +D P S + G R +Y +G G++ VF+ K +D VA+K+
Sbjct: 13 VKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKK 71
Query: 124 IKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT------EKCLTLVFEYLEKDLKR 177
+ + RE+ ++R ++H N+V L ++ E L LV EY+ + + R
Sbjct: 72 VLQDKRFKN-----RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR 126
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 153/296 (51%), Gaps = 34/296 (11%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH-- 250
G VF D VA+K+I L + A+RE+ ++R L H NIV + +I+
Sbjct: 22 GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK-HALREIKIIRRLDHDNIVKVFEILGPS 80
Query: 251 -----------TE-KCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHS 298
TE + +V EY+E DL ++ L + +LF++QLLRGL Y HS
Sbjct: 81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP--LLEEHARLFMYQLLRGLKYIHS 138
Query: 299 RRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKT----FSNEVVTLWYRPPDVLL 353
+LHRDLKP NL IN E LK+ DFGLAR P + S +VT WYR P +LL
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD-PHYSHKGHLSEGLVTKWYRSPRLLL 197
Query: 354 GSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT 412
Y+ +IDM GCIF EM +G+ LF G+ ++++LI + +E + +L +
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQEL-LSVI 256
Query: 413 PVY-------PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
PVY P + QLL + +A+D +++ L + R++A A+ HPY +
Sbjct: 257 PVYIRNDMTEPHKPLTQLLP--GISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 86 GFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 145
GF Y L LG G VF D VA+K+I L + A+RE+ ++R
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK-HALREIKIIRR 64
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNV 191
L H NIV VFE L + DD ++ +N+V
Sbjct: 65 LDHDNIVK-------------VFEILGPSGSQLTDDVGSLTELNSV 97
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 146/282 (51%), Gaps = 49/282 (17%)
Query: 229 REVSLLRELRHANIVTLHDIIHT------------------------------------- 251
RE+ +++ L H NI+ L D +T
Sbjct: 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPS 108
Query: 252 -EKCLTLVFEY----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
K L ++ EY L K LK ++ +I MN + ++++QL R + + HS I HRD+
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSI-PMNLISIYIYQLFRAVGFIHSLGICHRDI 167
Query: 307 KPQNLLINER-GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
KPQNLL+N + LKL DFG A+ K +P++ + + +YR P+++LG+TEY+ SID+
Sbjct: 168 KPQNLLVNSKDNTLKLCDFGSAK-KLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLW 226
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPV-YPS--ESKL 421
+GC+F E+ G+PLF G T D+L I I+G P E ++ T V +P+
Sbjct: 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW 286
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
+ + PE S A+DL+++ L Y+ RI+ AM HP+F+ L
Sbjct: 287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 36 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 90
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 91 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 150
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 151 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 207
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 208 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 267
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 268 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 326
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 327 TPALFNFTTQELSSNP 342
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 80
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 112
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 59 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 113
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 114 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 173
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 174 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 230
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 231 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 290
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 291 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 349
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 350 TPALFNFTTQELSSNP 365
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 103
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 135
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 65 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 119
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 236
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 296
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 297 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 355
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 356 TPALFNFTTQELSSNP 371
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 109
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 141
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 29/322 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 44 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 98
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 99 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 158
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 159 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 215
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 216 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 275
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 276 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 334
Query: 473 TQSIFSLPHIKLTSNPTDGGLL 494
T ++F+ +L+SNP +L
Sbjct: 335 TPALFNFTTQELSSNPPLATIL 356
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 88
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 120
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 69 GSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSS 123
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 124 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 183
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 184 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 240
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 241 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 300
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 301 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 359
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 360 TPALFNFTTQELSSNP 375
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 113
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 145
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 29/322 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 202
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 263 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 321
Query: 473 TQSIFSLPHIKLTSNPTDGGLL 494
T ++F+ +L+SNP +L
Sbjct: 322 TPALFNFTTQELSSNPPLATIL 343
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 170/323 (52%), Gaps = 31/323 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 202
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKL-----EFCITPV 414
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ EF P
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAF-PQ 261
Query: 415 YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELS 471
+ ++ P + +A+ L + L Y R++ A H +F+ L P V
Sbjct: 262 IKAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGR 320
Query: 472 DTQSIFSLPHIKLTSNPTDGGLL 494
DT ++F+ +L+SNP +L
Sbjct: 321 DTPALFNFTTQELSSNPPLATIL 343
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 67 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 121
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 122 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 181
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 182 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 238
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 239 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 298
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 299 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 357
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 358 TPALFNFTTQELSSNP 373
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 111
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 143
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 110 GSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSS 164
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 165 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 224
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 225 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 281
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 282 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 341
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 342 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 400
Query: 473 TQSIFSLPHIKLTSNP 488
T ++F+ +L+SNP
Sbjct: 401 TPALFNFTTQELSSNP 416
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNI 154
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 186
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 50 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 104
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 105 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 164
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 165 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 223
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 224 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 283
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 284 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 342
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 343 ALFNFTTQELSSNPPLATIL 362
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 94
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 126
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 43 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 97
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 216
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 276
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 277 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 335
Query: 475 SIFSLPHIKLTSNP 488
++F+ +L+SNP
Sbjct: 336 ALFNFTTQELSSNP 349
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 87
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 119
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 65 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 119
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 238
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 298
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 299 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 357
Query: 475 SIFSLPHIKLTSNP 488
++F+ +L+SNP
Sbjct: 358 ALFNFTTQELSSNP 371
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 109
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 141
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 264
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 265 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 323
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 324 ALFNFTTQELSSNPPLATIL 343
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 43 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 97
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 216
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 276
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 277 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 335
Query: 475 SIFSLPHIKLTSNP 488
++F+ +L+SNP
Sbjct: 336 ALFNFTTQELSSNP 349
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 87
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 119
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 35 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 89
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 90 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 149
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 150 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 208
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 209 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 268
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 269 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 327
Query: 475 SIFSLPHIKLTSNP 488
++F+ +L+SNP
Sbjct: 328 ALFNFTTQELSSNP 341
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 79
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 111
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 39 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 93
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 94 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 153
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 154 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 212
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 213 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 272
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 273 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 331
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 332 ALFNFTTQELSSNPPLATIL 351
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 83
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 115
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 264
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 265 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 323
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 324 ALFNFTTQELSSNPPLATIL 343
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 32 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 86
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 87 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 146
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 147 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 205
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 206 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 265
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 266 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 324
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 325 ALFNFTTQELSSNPPLATIL 344
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 76
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 108
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 169/322 (52%), Gaps = 29/322 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
RD+KPQNLL++ + LKL DFG A+ + P ++ + + +YR P+++ G+T+Y++
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTS 202
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVY 415
SID+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262
Query: 416 PSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSD 472
+ ++ P + +A+ L + L Y R++ A H +F+ L P V D
Sbjct: 263 KAHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRD 321
Query: 473 TQSIFSLPHIKLTSNPTDGGLL 494
T ++F+ +L+SNP +L
Sbjct: 322 TPALFNFTTQELSSNPPLATIL 343
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 169/321 (52%), Gaps = 27/321 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT- 251
G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNIVRLRYFFYSS 85
Query: 252 -----EKCLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E L LV +Y+ + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKL-----EFCITPVYP 416
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ EF P
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAF-PQIK 263
Query: 417 SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDT 473
+ ++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 264 AHPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDT 322
Query: 474 QSIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 323 PALFNFTTQELSSNPPLATIL 343
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ L+ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK----AFKNRELQIMRKLDHCNI 75
Query: 152 VTLHDIIHT------EKCLTLVFEYLEKDLKR 177
V L ++ E L LV +Y+ + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR 107
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 25/320 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G++ V++ K + LVA+K++ + RE+ ++R+L H NIV L ++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIVRLRYFFYSS 85
Query: 253 K------CLTLVFEYLEKDL---KRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
L LV +Y+ + + R+ L + VKL+++QL R LAY HS I H
Sbjct: 86 GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 304 RDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
RD+KPQNLL++ + LKL DFG A+ + V + + + + +YR P+++ G+T+Y++SI
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCIT----PVYPS 417
D+ GC+ E+ G+P+FPG + D+L I +LG P E ++ T P +
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 264
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL-GPQVH--ELSDTQ 474
++ P + +A+ L + L Y R++ A H +F+ L P V DT
Sbjct: 265 HPWTKVFRP-RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTP 323
Query: 475 SIFSLPHIKLTSNPTDGGLL 494
++F+ +L+SNP +L
Sbjct: 324 ALFNFTTQELSSNPPLATIL 343
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
SY +G G++ V++ K + LVA+K++ + RE+ ++R+L H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNI 75
Query: 152 VTLHDIIHTEK------CLTLVFEYLEKDLKR 177
V L ++ L LV +Y+ + + R
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR 107
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 164/355 (46%), Gaps = 76/355 (21%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHANIVTLHDIIH 250
+G+Y V+ + + VA+K++ E+ C I RE+++L L+ I+ LHD+I
Sbjct: 38 RGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLII 97
Query: 251 TEKCLT-----LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
E L +V E + DLK+ L+ +VK L+ LL G + H I+HRD
Sbjct: 98 PEDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLGEKFIHESGIIHRD 156
Query: 306 LKPQNLLINERGELKLADFGLARAKSVP-------------------------TKTFSNE 340
LKP N L+N+ +K+ DFGLAR + K ++
Sbjct: 157 LKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSH 216
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM-----------SSGRPLFPGSTI--- 385
VVT WYR P+++L Y+ SID+ GCIF E+ ++ PLFPGS+
Sbjct: 217 VVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPL 276
Query: 386 --------------EDELRLICSILGPPPDE-LKSKLEFCIT--------PVYPSESKLQ 422
D+L +I +++G PP+E LK CIT ++P+ +
Sbjct: 277 SPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLK-----CITKQEVIKYIKLFPTRDGID 331
Query: 423 LLAP-EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSI 476
L + + +DL++ L ++A++RI+ A+ HPY + + E T+ I
Sbjct: 332 LSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKI 386
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 49/318 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL---RHANIVTLHDI 248
+GT+ TV GK + T VA+K++ + P RE+ ++++L H NIV L
Sbjct: 33 QGTFGTVQLGKEKSTGMSVAIKKVIQD-----PRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 249 IHT-------EKCLTLVFEYLEKDLKRYMDDCSNILSMNN------VKLFLFQLLRGLAY 295
+T + L +V EY+ L R C N +K+FLFQL+R +
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPDTLHRC---CRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 296 CH--SRRILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
H S + HRD+KP N+L+NE G LKL DFG A+ S P++ + + +YR P+++
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELI 203
Query: 353 LGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI 411
G+ Y+T++D+ VGCIF EM G P+F G +L I +LG P E+ KL
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN--- 260
Query: 412 TPVYPSESKLQLLAPEQMD-------------SDALDLVQKFLMYDAKQRISAANAMRHP 458
PS + + L + + +A DL+ L Y ++R+ A+ HP
Sbjct: 261 ----PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316
Query: 459 YFNSLGPQVHELSDTQSI 476
YF+ L +L + + +
Sbjct: 317 YFDELHDPATKLPNNKDL 334
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 16/95 (16%)
Query: 94 FKLDKL-GQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE---LRHA 149
F+++++ GQGT+ TV GK + T VA+K++ + P RE+ ++++ L H
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-----PRFRNRELQIMQDLAVLHHP 79
Query: 150 NIVTLHDIIHT-------EKCLTLVFEYLEKDLKR 177
NIV L +T + L +V EY+ L R
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHR 114
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 25/255 (9%)
Query: 227 AIREVSLLRELRHANIVTLHDI-IHTEKC----LTLVFEYLEKDLKRYMDDCSNILSMNN 281
+RE+ LL H NI+ L DI +H E+ L LV E + DL + + D ++S +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 282 VKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEV 341
++ F++ +L GL H ++HRDL P N+L+ + ++ + DF LAR + ++ V
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYV 194
Query: 342 VTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP 400
WYR P++++ ++ +DM GC+ EM + + LF GST ++L I ++G P
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP- 253
Query: 401 DELKSKLEFCITPVYPSE------------SKLQLLAPEQMDSDALDLVQKFLMYDAKQR 448
K+E + PS ++ D ALDL+ K L ++ ++R
Sbjct: 254 -----KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 449 ISAANAMRHPYFNSL 463
IS A+RHPYF SL
Sbjct: 309 ISTEQALRHPYFESL 323
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 136 AIREVSLLRELRHANIVTLHDI-IHTEKC----LTLVFEYLEKDLKRYMDDCSNILSMNN 190
+RE+ LL H NI+ L DI +H E+ L LV E + DL + + D ++S +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 191 VK 192
++
Sbjct: 136 IQ 137
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 25/255 (9%)
Query: 227 AIREVSLLRELRHANIVTLHDI-IHTEKC----LTLVFEYLEKDLKRYMDDCSNILSMNN 281
+RE+ LL H NI+ L DI +H E+ L LV E + DL + + D ++S +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 282 VKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEV 341
++ F++ +L GL H ++HRDL P N+L+ + ++ + DF LAR + ++ V
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYV 194
Query: 342 VTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP 400
WYR P++++ ++ +DM GC+ EM + + LF GST ++L I ++G P
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP- 253
Query: 401 DELKSKLEFCITPVYPSE------------SKLQLLAPEQMDSDALDLVQKFLMYDAKQR 448
K+E + PS ++ D ALDL+ K L ++ ++R
Sbjct: 254 -----KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 449 ISAANAMRHPYFNSL 463
IS A+RHPYF SL
Sbjct: 309 ISTEQALRHPYFESL 323
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 136 AIREVSLLRELRHANIVTLHDI-IHTEKC----LTLVFEYLEKDLKRYMDDCSNILSMNN 190
+RE+ LL H NI+ L DI +H E+ L LV E + DL + + D ++S +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 191 VK 192
++
Sbjct: 136 IQ 137
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L + + L
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHE 126
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR + +
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPY 185
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + LG P
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 400 PDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQKFLM 442
E KL+ + P Y S + L P+ + S A DL+ K L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 443 YDAKQRISAANAMRHPYFN 461
DA +RIS A++HPY N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 34/261 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ EVVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + L
Sbjct: 183 TPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQL----LAPEQMDSDAL------DLVQKF 440
G P E KL+ + P Y S +L L P + +AL DL+ K
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKM 301
Query: 441 LMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 302 LVIDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L + + L
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHE 126
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPY 185
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + LG P
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 400 PDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQKFLM 442
E KL+ + P Y S + L P+ + S A DL+ K L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 443 YDAKQRISAANAMRHPYFN 461
DA +RIS A++HPY N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L + + L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHE 126
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPY 185
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + LG P
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 400 PDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQKFLM 442
E KL+ + P Y S + L P+ + S A DL+ K L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 443 YDAKQRISAANAMRHPYFN 461
DA +RIS A++HPY N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 154/341 (45%), Gaps = 71/341 (20%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHANIVTLHDII-- 249
G+Y V + +L +VA+K+I E+ C I RE+++L L H ++V + DI+
Sbjct: 64 GSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIP 123
Query: 250 -HTEKC--LTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
EK L +V E + D K+ + ++ +K L+ LL G+ Y HS ILHRDL
Sbjct: 124 KDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH-IKTLLYNLLVGVKYVHSAGILHRDL 182
Query: 307 KPQNLLINERGELKLADFGLARAKSVP---------------------------TKTFSN 339
KP N L+N+ +K+ DFGLAR P + +
Sbjct: 183 KPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTG 242
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM-----------SSGRPLFPGSTI-- 385
VVT WYR P+++L Y+ +ID+ +GCIF E+ + PLFPGS+
Sbjct: 243 HVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFP 302
Query: 386 ------------------EDELRLICSILGPPPDELKSKLE----FCITPVYPSESKLQL 423
D+L +I +ILG P +E LE ++P L
Sbjct: 303 LSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362
Query: 424 LAPEQMDS-DALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
S DA+ L+++ L+++ +RI+ + HP+F +
Sbjct: 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+K L LV E ++ +L + + L + L+Q+L G+ + HS I+HRD
Sbjct: 95 QKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++D+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 209
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI------------- 411
VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 210 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 412 -------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKR 177
+ L++ + H NI++L ++ +K L LV E ++ +L +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 117
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L + + L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHE 126
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPY 185
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + LG P
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 400 PDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQKFLM 442
E KL+ + P Y S + L P+ + S A DL+ K L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 443 YDAKQRISAANAMRHPYFN 461
DA +RIS A++HPY N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + L
Sbjct: 183 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 301 MLVIDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L S ++ M
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQME 122
Query: 281 ----NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFM 181
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSI 395
+ VVT +YR P+V+LG Y ++D+ VG I EM G LFPG+ D+ +
Sbjct: 182 MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
Query: 396 LGPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQ 438
LG P E KL+ + P Y S + L P+ + S A DL+
Sbjct: 241 LGTPSPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 439 KFLMYDAKQRISAANAMRHPYFN 461
K L+ DA +RIS A++HPY N
Sbjct: 300 KMLVIDASKRISVDEALQHPYIN 322
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 130/262 (49%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
EVVT +YR P+V+LG Y ++D+ VGCI EM + LFPG D+ + L
Sbjct: 183 EPEVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 301 MLVIDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNILSMN 280
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L S ++ M
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQME 122
Query: 281 ----NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFM 181
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSI 395
+ VVT +YR P+V+LG Y ++D+ VG I EM G LFPG+ D+ +
Sbjct: 182 MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
Query: 396 LGPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQ 438
LG P E KL+ + P Y S + L P+ + S A DL+
Sbjct: 241 LGTPSPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLS 299
Query: 439 KFLMYDAKQRISAANAMRHPYFN 461
K L+ DA +RIS A++HPY N
Sbjct: 300 KMLVIDASKRISVDEALQHPYIN 322
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 95 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 148
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 206
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 115
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 124
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 183
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + L
Sbjct: 184 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 301
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 302 MLVIDASKRISVDEALQHPYIN 323
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 74 TRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH 128
+RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 62
Query: 129 EEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+K L LV E ++ +L + + L + L+Q+L G+ + HS I+HRD
Sbjct: 95 QKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++D+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 209
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI------------- 411
VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 210 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 412 -------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKR 177
+ L++ + H NI++L ++ +K L LV E ++ +L +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 117
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+K L LV E ++ +L + + L + L+Q+L G+ + HS I+HRD
Sbjct: 95 QKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++D+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 209
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI------------- 411
VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 210 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 412 -------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKR 177
+ L++ + H NI++L ++ +K L LV E ++ +L +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 117
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + L
Sbjct: 183 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 301 MLVIDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+K L LV E ++ +L + + L + L+Q+L G+ + HS I+HRD
Sbjct: 88 QKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 144
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
LKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++D+
Sbjct: 145 LKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 202
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI------------- 411
VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
Query: 412 -------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 7 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 66
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDLKR 177
+ L++ + H NI++L ++ +K L LV E ++ +L +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 110
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 161/347 (46%), Gaps = 63/347 (18%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHANIVTLHDIIH 250
+G+Y V+ + T+ VA+K++ E+ C I RE+++L L+ I+ L+D+I
Sbjct: 36 RGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII 95
Query: 251 TEKCLT-----LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L +V E + DLK+ L+ ++K L+ LL G + H I+HRD
Sbjct: 96 PDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGIIHRD 154
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKT----------------------FSNEVVT 343
LKP N L+N+ +K+ DFGLAR + T ++ VVT
Sbjct: 155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT 214
Query: 344 LWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM-----------SSGRPLFPGSTI------ 385
WYR P+++L Y+ SID+ GCIF E+ ++ PLFPGS+
Sbjct: 215 RWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPD 274
Query: 386 -----------EDELRLICSILGPPP-DELK--SKLEFC-ITPVYPSESKLQLLAP-EQM 429
D+L +I +I+G P D+LK +K E ++P + L +
Sbjct: 275 RNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSI 476
D ++L++ L ++ +RI+ A+ HPY + + E T+ I
Sbjct: 335 SDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKI 381
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 76 SSRRQSLSEIGFGRI---ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGA 132
SS R++L G + ++Y +G+G+Y V+ + T+ VA+K++ E+
Sbjct: 8 SSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI 67
Query: 133 PCTAI-REVSLLRELRHANIVTLHDIIHTEKCLT-----LVFEYLEKDLKR 177
C I RE+++L L+ I+ L+D+I + L +V E + DLK+
Sbjct: 68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK 118
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 73 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 133 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 186
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 244
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 304
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 305 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 52 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 153
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 130/262 (49%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 125
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 126 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 184
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
VVT +YR P+V+LG Y ++D+ VGCI EM G LFPG+ D+ + L
Sbjct: 185 VPFVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 244 GTPCPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 302
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 303 MLVIDASKRISVDEALQHPYIN 324
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 3 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 62
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 36 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 96 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 149
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 207
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 267
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 268 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 15 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 74
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 116
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 36 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 96 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 149
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 207
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 267
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 268 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 15 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 74
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 116
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 95 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 148
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 206
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 115
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 34 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 93
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 94 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 147
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 205
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 206 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 265
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 266 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 13 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 72
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 114
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 95 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 148
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 206
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 115
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 73 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 133 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 186
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 244
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 304
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 305 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 52 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 153
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 29 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 89 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 142
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 200
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 260
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 261 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 8 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 67
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 109
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 88 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 141
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 259
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 7 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 66
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 108
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 43/300 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRELRHANIVTLHDIIHT 251
G V + D VA+K++ + A RE+ L++ + H NI++L ++
Sbjct: 29 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 252 EKCL------TLVFEYLEKDLKRYMDDCSNI---LSMNNVKLFLFQLLRGLAYCHSRRIL 302
+K L LV E ++ +L C I L + L+Q+L G+ + HS I+
Sbjct: 89 QKTLEEFQDVYLVMELMDANL------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 142
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRDLKP N+++ LK+ DFGLAR + + VVT +YR P+V+LG Y ++
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENV 200
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI---------- 411
D+ VGCI EM + LFPG D+ + LG P E KL+ +
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 260
Query: 412 ----------TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
++P++S+ L Q A DL+ K L+ D +RIS +A++HPY N
Sbjct: 261 AGLTFPKLFPDSLFPADSEHNKLKASQ----ARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
E+G F ++ Y L +G G V + D VA+K++ + A RE
Sbjct: 8 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 67
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLEKDL 175
+ L++ + H NI++L ++ +K L LV E ++ +L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 109
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 128
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 129 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 187
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI EM + LFPG D+ + L
Sbjct: 188 TPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 246
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 247 GTPCPEFMKKLQPTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 305
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 306 MLVIDASKRISVDEALQHPYIN 327
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 6 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 65
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 34/261 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ LL+ + H NI++L ++ +K L LV E ++ +L C I L
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL------CQVIHMEL 121
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR S
Sbjct: 122 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST-NFMM 180
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI E+ G +F G+ D+ + L
Sbjct: 181 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQL----LAPEQMDSD------ALDLVQKF 440
G P E + L+ + P YP + +L + P + + D A DL+ K
Sbjct: 240 GTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKM 299
Query: 441 LMYDAKQRISAANAMRHPYFN 461
L+ D +RIS A+RHPY
Sbjct: 300 LVIDPDKRISVDEALRHPYIT 320
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 57 HLPESFLAKTNIIDAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTD 116
H+ F + + D+ T R Q L IG G QG F + L
Sbjct: 3 HMDSQFYS-VQVADSTFTVLKRYQQLKPIGSG-----------AQGIVCAAFD--TVLGI 48
Query: 117 NLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCL------TLVFEY 170
N+ K + + A RE+ LL+ + H NI++L ++ +K L LV E
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 171 LEKDL 175
++ +L
Sbjct: 109 MDANL 113
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 117
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 176
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y ++D+ VGCI EM + LFPG D+ + L
Sbjct: 177 TPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 235
Query: 397 GPPPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDAL----------------DLVQKF 440
G P E KL+ + + K + E++ D L DL+ K
Sbjct: 236 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 295
Query: 441 LMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 296 LVIDASKRISVDEALQHPYIN 316
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 84 EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIRE 139
EIG F ++ Y L +G G V + + VA+K++ + A RE
Sbjct: 8 EIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE 67
Query: 140 VSLLRELRHANIVTLHDIIHTEKCL 164
+ L++ + H NI+ L ++ +K L
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSL 92
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 129/262 (49%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ L++ + H NI+ L ++ +K L +V E ++ +L C I L
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------CQVIQMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
EVVT +YR P+V+LG Y ++D+ VGCI EM + LFPG D+ + L
Sbjct: 183 EPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P KL+ + P Y S + L P+ + S A DL+ K
Sbjct: 242 GTPCPAFMKKLQPTVRNYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ DA +RIS A++HPY N
Sbjct: 301 MLVIDASKRISVDEALQHPYIN 322
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 73 LTRSSRRQSLS--EIG---FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE 127
++RS R + EIG F ++ Y L +G G V + + VA+K++
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 128 HEEGAPCT-AIREVSLLRELRHANIVTLHDIIHTEKCL 164
+ A RE+ L++ + H NI+ L ++ +K L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 36/262 (13%)
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCLT------LVFEYLEKDLKRYMDDCSNI---L 277
A RE+ LL+ + H NI++L ++ +K L LV E ++ +L C I L
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL------CQVIHMEL 123
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
+ L+Q+L G+ + HS I+HRDLKP N+++ LK+ DFGLAR +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMM 182
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ VVT +YR P+V+LG Y+ ++D+ VGCI E+ G +F G+ D+ + L
Sbjct: 183 TPYVVTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQL 241
Query: 397 GPPPDELKSKLEFCI------TPVYPSESKLQLLAPEQM-----------DSDALDLVQK 439
G P E + L+ + P YP K + L P+ + S A DL+ K
Sbjct: 242 GTPSAEFMAALQPTVRNYVENRPKYPG-IKFEELFPDWIFPSESERDKIKTSQARDLLSK 300
Query: 440 FLMYDAKQRISAANAMRHPYFN 461
L+ D +RIS A+RHPY
Sbjct: 301 MLVIDPDKRISVDEALRHPYIT 322
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 87 FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT-AIREVSLLRE 145
F ++ Y +L +G G V + VA+K++ + A RE+ LL+
Sbjct: 20 FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 79
Query: 146 LRHANIVTLHDIIHTEKCLT------LVFEYLEKDL 175
+ H NI++L ++ +K L LV E ++ +L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 115
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 47/321 (14%)
Query: 176 KRYMDDCSNILSMNNV----------KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC 225
+ Y D S+++ N +G Y+ VF+ + + V +K +K +
Sbjct: 21 REYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK- 79
Query: 226 TAIREVSLLRELRHA-NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNN 281
RE+ +L LR NI+TL DI+ + LVFE++ D K+ L+ +
Sbjct: 80 ---REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYD 132
Query: 282 VKLFLFQLLRGLAYCHSRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNE 340
++ +++++L+ L YCHS I+HRD+KP N++I+ E +L+L D+GLA P + ++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVR 191
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGP 398
V + +++ P++L+ Y S+DM +GC+ M + P F G D+L I +LG
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 399 PP-----DELKSKLEFCITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLM 442
D+ +L+ + S+ L++PE ALD + K L
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLR 306
Query: 443 YDAKQRISAANAMRHPYFNSL 463
YD + R++A AM HPYF ++
Sbjct: 307 YDHQSRLTAREAMEHPYFYTV 327
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 85 IGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLR 144
+ +G + Y + KLG+G Y+ VF+ + + V +K +K + RE+ +L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK----REIKILE 86
Query: 145 ELRHA-NIVTLHDIIH--TEKCLTLVFEYL 171
LR NI+TL DI+ + LVFE++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPALVFEHV 116
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 131/245 (53%), Gaps = 38/245 (15%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+ L D + K LVFEY+ D K+ IL+ +++ ++++LL+ L YCH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ----LYQILTDFDIRFYMYELLKALDYCH 149
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ ++ +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLVDYQ 208
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPV 414
Y S+DM +GC+ M R P F G D+L I +LG +EL L+ +
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDL 266
Query: 415 YP-------------------SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAM 455
P SE++ L++PE ALDL+ K L YD +QR++A AM
Sbjct: 267 DPHFNDILGQHSRKRWENFIHSENR-HLVSPE-----ALDLLDKLLRYDHQQRLTAKEAM 320
Query: 456 RHPYF 460
HPYF
Sbjct: 321 EHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 131/246 (53%), Gaps = 38/246 (15%)
Query: 240 ANIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
NI+ L D + K LVFEY+ D K+ IL+ +++ ++++LL+ L YC
Sbjct: 98 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQ----LYQILTDFDIRFYMYELLKALDYC 153
Query: 297 HSRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGS 355
HS+ I+HRD+KP N++I+ ++ +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLVDY 212
Query: 356 TEYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPPDELKSKLEFCITP 413
Y S+DM +GC+ M R P F G D+L I +LG +EL L+
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHID 270
Query: 414 VYP-------------------SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANA 454
+ P SE++ L++PE ALDL+ K L YD +QR++A A
Sbjct: 271 LDPHFNDILGQHSRKRWENFIHSENR-HLVSPE-----ALDLLDKLLRYDHQQRLTAKEA 324
Query: 455 MRHPYF 460
M HPYF
Sbjct: 325 MEHPYF 330
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 143
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 202
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 459 YFNSL 463
YF +
Sbjct: 318 YFQQV 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 163
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 222
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 283 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 337
Query: 459 YFNSL 463
YF +
Sbjct: 338 YFQQV 342
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 144
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 203
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 263
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 264 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 318
Query: 459 YFNSL 463
YF +
Sbjct: 319 YFQQV 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 142
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 201
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 459 YFNSL 463
YF +
Sbjct: 317 YFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIHTE--KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NIV L DI+ + K +L+FEY+ D K L+ +++ ++++LL+ L YCH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV----LYPTLTDYDIRYYIYELLKALDYCH 143
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S+ I+HRD+KP N++I+ E +L+L D+GLA P K ++ V + +++ P++L+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 202
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP---------DELKS 405
+Y S+DM +GC+F M + P F G D+L I +LG EL
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 406 KLEFCI-----TPV--YPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+LE + P + + L++PE A+D + K L YD ++R++A AM HP
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPE-----AIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 459 YFNSL 463
YF +
Sbjct: 318 YFQQV 322
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + R + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 140 PENLLLGSNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G P F T ++ R I S++EF P
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRI------------SRVEFTF--------------P 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++A QR++ A + HP+ +
Sbjct: 231 DFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
S R+ +L + GR LG+G + V+ + R + ++ALK + +LE + G
Sbjct: 5 SKRQWTLEDFDIGR--------PLGKGKFGNVYLARERQSKFILALKVLFKTQLE-KAGV 55
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 93
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + R + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 140 PENLLLGSNGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G P F T ++ R I S++EF P
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRI------------SRVEFTF--------------P 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++A QR++ A + HP+ +
Sbjct: 231 DFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
S R+ +L + GR LG+G + V+ + R + ++ALK + +LE + G
Sbjct: 5 SKRQWTLEDFDIGR--------PLGKGKFGNVYLARERQSKFILALKVLFKTQLE-KAGV 55
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 93
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N+LI+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 146
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 205
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 320
Query: 459 YFNSL 463
YF ++
Sbjct: 321 YFYTV 325
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LRQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 147
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 206
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 459 YFNSL 463
YF ++
Sbjct: 322 YFYTV 326
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YFNSL 463
YF ++
Sbjct: 323 YFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 147
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 206
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 459 YFNSL 463
YF ++
Sbjct: 322 YFYTV 326
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 153
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 212
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 272
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 273 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 327
Query: 459 YFNSL 463
YF ++
Sbjct: 328 YFYTV 332
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 32/242 (13%)
Query: 241 NIVTLHDIIH--TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCH 297
NI+TL DI+ + LVFE++ D K+ L+ +++ +++++L+ L YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 SRRILHRDLKPQNLLIN-ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST 356
S I+HRD+KP N++I+ E +L+L D+GLA P + ++ V + +++ P++L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 357 EYSTSIDM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP-----DELKSKLEF 409
Y S+DM +GC+ M + P F G D+L I +LG D+ +L+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 410 CITPVYPSESK-----------LQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ S+ L++PE ALD + K L YD + R++A AM HP
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPE-----ALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 459 YF 460
YF
Sbjct: 323 YF 324
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + ++ + + S ++ +L L+YCHS+R++HRD+K
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 141 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 8 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 58
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 162 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 29 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 79
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 38/277 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 308 PQNLLINERGELKLADFGLA-RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-G 365
P+NLL+ GELK+ADFG + A S T S TL Y PP+++ G + +D+
Sbjct: 137 PENLLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRM-HDEKVDLWS 192
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLA 425
+G + +E G+P F +T ++ + I S++EF
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF-------------- 226
Query: 426 PEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
P+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 4 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 54
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 162 PENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 29 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 79
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 115
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 35 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 152
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 153 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 209
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 210 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 243
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 20 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 70
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 106
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ ++ TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 3 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 53
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ ++ TL Y PP+++ G + +D+ +
Sbjct: 141 PENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 8 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 58
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ ++ TL Y PP+++ G + +D+ +
Sbjct: 137 PENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 227
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 4 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 54
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ ++ TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 3 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 53
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+ + G + +D+ +
Sbjct: 141 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEXIEGRX-HDEKVDLWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 8 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 58
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 141 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 8 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 58
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 6 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 56
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 3 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 53
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 17 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 134
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 135 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 192 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 2 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 52
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 88
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + ++ + + S ++ +L L+YCHS+R++HRD+K
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 141 PENLLLGSAGELKIADFGW--SVHAPSSRRXXLXGTLDYLPPEMIEGRM-HDEKVDLWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 8 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 58
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 6 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 56
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRTELCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 3 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 53
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 22 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 140 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 197 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
S R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 5 SKRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 55
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 93
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 1 GKRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 51
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
SR+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 4 GSRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 54
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
SR+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 4 GSRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 54
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
+ R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 1 AKRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 51
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKNSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS++++HRD+K
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKKVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T +D + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQDTYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
+ R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 1 AKRQWALEDFEIGR--------PLGKGKFGNVYLAREKNSKFILALKVLFKAQLE-KAGV 51
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEY 89
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 137 PENLLLGSAGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 227
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 4 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 54
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 6 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 56
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 138 PENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSL 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 228
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 5 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 55
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ TL Y PP+++ G + +D+ +
Sbjct: 136 PENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 226
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGA 132
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 1 GKRQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGV 51
Query: 133 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 89
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+A+FG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 138 PENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 228
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 5 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 55
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 91
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 15 KGKFGNVYLAREKQRKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+ADFG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 133 PENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 189
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 190 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 223
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G + V+ + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 156 DIIHTEKCLTLVFEY 170
H + L+ EY
Sbjct: 72 GYFHDATRVYLILEY 86
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKL---EHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G +TV+ + + + VA+K I + E EE REV +L H NIV++ D+
Sbjct: 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE-REVHNSSQLSHQNIVSMIDVD 80
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ C LV EY+E L Y++ LS++ F Q+L G+ + H RI+HRD+KP
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP 139
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLG-STEYSTSIDMGV 366
QN+LI+ LK+ DFG+A+A S + T +N V+ T+ Y P+ G +T+ T I +
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDI-YSI 198
Query: 367 GCIFHEMSSGRPLFPGST 384
G + +EM G P F G T
Sbjct: 199 GIVLYEMLVGEPPFNGET 216
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 87 FGRI--ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL---EHEEGAPCTAIREVS 141
G+I E Y +DKLG G +TV+ + + + VA+K I + E EE REV
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE-REVH 63
Query: 142 LLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+L H NIV++ D+ + C LV EY+E
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 44/280 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ +++
Sbjct: 24 KGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNY 82
Query: 249 IHTEKCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
H K + L+ E+ L K+L+++ F+ +L L YCH R+++H
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 304 RDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
RD+KP+NLL+ +GELK+ADFG + P+ TL Y PP+++ G T + +D
Sbjct: 138 RDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVD 194
Query: 364 MG-VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
+ G + +E G P F + + R I ++
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------------------------D 228
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
L P + + DL+ K L Y QR+ M HP+ +
Sbjct: 229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 156 DIIHTEKCLTLVFEY 170
+ H K + L+ E+
Sbjct: 81 NYFHDRKRIYLMLEF 95
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 44/280 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ +++
Sbjct: 25 KGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNY 83
Query: 249 IHTEKCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
H K + L+ E+ L K+L+++ F+ +L L YCH R+++H
Sbjct: 84 FHDRKRIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 304 RDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
RD+KP+NLL+ +GELK+ADFG + P+ TL Y PP+++ G T + +D
Sbjct: 139 RDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVD 195
Query: 364 MG-VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
+ G + +E G P F + + R I ++
Sbjct: 196 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------------------------D 229
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
L P + + DL+ K L Y QR+ M HP+ +
Sbjct: 230 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 269
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ ++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMY 81
Query: 156 DIIHTEKCLTLVFEY 170
+ H K + L+ E+
Sbjct: 82 NYFHDRKRIYLMLEF 96
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + ++ALK + +LE + G REV + LRH NI+ L+
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
H + L+ EY + R + S ++ +L L+YCHS+R++HRD+K
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
P+NLL+ GELK+A+FG + P+ + TL Y PP+++ G + +D+ +
Sbjct: 139 PENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +E G+P F +T ++ + I S++EF P
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRI------------SRVEFTF--------------P 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A DL+ + L ++ QR + HP+ +
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 78 RRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALK---EIKLEHEEGAPC 134
R+ +L + GR LG+G + V+ + + + ++ALK + +LE + G
Sbjct: 6 RQWALEDFEIGR--------PLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEH 56
Query: 135 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
REV + LRH NI+ L+ H + L+ EY
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 92
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 44/280 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ +++
Sbjct: 24 KGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNY 82
Query: 249 IHTEKCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
H K + L+ E+ L K+L+++ F+ +L L YCH R+++H
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 304 RDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
RD+KP+NLL+ +GELK+ADFG + P+ TL Y PP+++ G T + +D
Sbjct: 138 RDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVD 194
Query: 364 MG-VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
+ G + +E G P F + + R I ++
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------------------------D 228
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
L P + + DL+ K L Y QR+ M HP+ +
Sbjct: 229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G + V+ + + ++ALK + +LE +EG RE+ + LRH NI+ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 156 DIIHTEKCLTLVFEY 170
+ H K + L+ E+
Sbjct: 81 NYFHDRKRIYLMLEF 95
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 47/308 (15%)
Query: 184 NILSMNNVKGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANI 242
NI+ M KG++ V K K R+T A+K I K + T +REV LL++L H NI
Sbjct: 25 NIVCMLG-KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VTLHDIIHTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGL 293
+ L +I+ +V E Y +L KR+ + D + I+ Q+ G+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK---------QVFSGI 134
Query: 294 AYCHSRRILHRDLKPQNLLINERG---ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPD 350
Y H I+HRDLKP+N+L+ + ++K+ DFGL+ TK + + T +Y P+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPE 193
Query: 351 VLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC 410
VL G+ + + G I + + SG P F G D L+
Sbjct: 194 VLRGTYDEKCDV-WSAGVILYILLSGTPPFYGKNEYDILK-------------------- 232
Query: 411 ITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHEL 470
V + L + DA DL++K L + RI+A + HP+ + +
Sbjct: 233 --RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTI 290
Query: 471 SDTQSIFS 478
SD S+ S
Sbjct: 291 SDLPSLES 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
LG+G++ V K K R+T A+K I K + T +REV LL++L H NI+ L +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 158 IHTEKCLTLVFE 169
+ +V E
Sbjct: 90 LEDSSSFYIVGE 101
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++A V++ +S T VA+K I K ++ G EV + +L+H +I+ L++
Sbjct: 21 KGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF 80
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ LV E ++ RY+ + S N + F+ Q++ G+ Y HS ILHRDL
Sbjct: 81 EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTL 140
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
NLL+ +K+ADFGLA +P + T Y P++ S S +GC
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGC 200
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+F+ + GRP F T+++ L + +LA +
Sbjct: 201 MFYTLLIGRPPFDTDTVKNTLNKV------------------------------VLADYE 230
Query: 429 MDS----DALDLVQKFLMYDAKQRISAANAMRHPYFN 461
M S +A DL+ + L + R+S ++ + HP+ +
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLREL 146
+IE + + LG+G++A V++ +S T VA+K I K ++ G EV + +L
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKGTYATVFKG 201
+H +I+ L++ + LV E ++ RY+ + S N + + G
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 184 NILSMNNVKGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANI 242
NI+ M KG++ V K K R+T A+K I K + T +REV LL++L H NI
Sbjct: 25 NIVCMLG-KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ L +I+ +V E ++ +KR S ++ + Q+ G+ Y
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR------KRFSEHDAARIIKQVFSGITYM 137
Query: 297 HSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
H I+HRDLKP+N+L+ + ++K+ DFGL+ TK + + T +Y P+VL
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLR 196
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITP 413
G+ + + G I + + SG P F G D L+
Sbjct: 197 GTYDEKCDV-WSAGVILYILLSGTPPFYGKNEYDILK----------------------R 233
Query: 414 VYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
V + L + DA DL++K L + RI+A + HP+
Sbjct: 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
LG+G++ V K K R+T A+K I K + T +REV LL++L H NI+ L +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 158 IHTEKCLTLVFE 169
+ +V E
Sbjct: 90 LEDSSSFYIVGE 101
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 184 NILSMNNVKGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANI 242
NI+ M KG++ V K K R+T A+K I K + T +REV LL++L H NI
Sbjct: 25 NIVCMLG-KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ L +I+ +V E ++ +KR S ++ + Q+ G+ Y
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR------KRFSEHDAARIIKQVFSGITYM 137
Query: 297 HSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
H I+HRDLKP+N+L+ + ++K+ DFGL+ TK + + T +Y P+VL
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLR 196
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITP 413
G+ + + G I + + SG P F G D L+
Sbjct: 197 GTYDEKCDV-WSAGVILYILLSGTPPFYGKNEYDILK----------------------R 233
Query: 414 VYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
V + L + DA DL++K L + RI+A + HP+
Sbjct: 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
LG+G++ V K K R+T A+K I K + T +REV LL++L H NI+ L +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 158 IHTEKCLTLVFE 169
+ +V E
Sbjct: 90 LEDSSSFYIVGE 101
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 37/301 (12%)
Query: 180 DDCSNILSMNNVKGT--YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL 237
+D +I +V GT ++ V + + T LVA+K I E EG + E+++L ++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 238 RHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAY 295
+H NIV L DI + L L+ + + R ++ + + +FQ+L + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKY 131
Query: 296 CHSRRILHRDLKPQNLL---INERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
H I+HRDLKP+NLL ++E ++ ++DFGL++ + P S T Y P+V
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPEV- 189
Query: 353 LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI 411
L YS ++D +G I + + G P F E++ +L I LK++ EF
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD---ENDAKLFEQI-------LKAEYEFD- 238
Query: 412 TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF---NSLGPQVH 468
+P + + + A D ++ + D ++R + A++HP+ +L +H
Sbjct: 239 SPYW-----------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
Query: 469 E 469
+
Sbjct: 288 Q 288
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LG G ++ V + + T LVA+K I E EG + E+++L +++H NIV L D
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 157 IIHTEKCLTLVFE 169
I + L L+ +
Sbjct: 84 IYESGGHLYLIMQ 96
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 37/301 (12%)
Query: 180 DDCSNILSMNNVKGT--YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL 237
+D +I +V GT ++ V + + T LVA+K I E EG + E+++L ++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 238 RHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAY 295
+H NIV L DI + L L+ + + R ++ + + +FQ+L + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKY 131
Query: 296 CHSRRILHRDLKPQNLL---INERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
H I+HRDLKP+NLL ++E ++ ++DFGL++ + P S T Y P+V
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPEV- 189
Query: 353 LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI 411
L YS ++D +G I + + G P F E++ +L I LK++ EF
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD---ENDAKLFEQI-------LKAEYEFD- 238
Query: 412 TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF---NSLGPQVH 468
+P + + + A D ++ + D ++R + A++HP+ +L +H
Sbjct: 239 SPYW-----------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
Query: 469 E 469
+
Sbjct: 288 Q 288
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LG G ++ V + + T LVA+K I E EG + E+++L +++H NIV L D
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 157 IIHTEKCLTLVFE 169
I + L L+ +
Sbjct: 84 IYESGGHLYLIMQ 96
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 37/301 (12%)
Query: 180 DDCSNILSMNNVKGT--YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL 237
+D +I +V GT ++ V + + T LVA+K I E EG + E+++L ++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 238 RHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAY 295
+H NIV L DI + L L+ + + R ++ + + +FQ+L + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKY 131
Query: 296 CHSRRILHRDLKPQNLL---INERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
H I+HRDLKP+NLL ++E ++ ++DFGL++ + P S T Y P+V
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPEV- 189
Query: 353 LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI 411
L YS ++D +G I + + G P F E++ +L I LK++ EF
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD---ENDAKLFEQI-------LKAEYEFD- 238
Query: 412 TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF---NSLGPQVH 468
+P + + + A D ++ + D ++R + A++HP+ +L +H
Sbjct: 239 SPYW-----------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
Query: 469 E 469
+
Sbjct: 288 Q 288
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LG G ++ V + + T LVA+K I E EG + E+++L +++H NIV L D
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 157 IIHTEKCLTLVFE 169
I + L L+ +
Sbjct: 84 IYESGGHLYLIMQ 96
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 37/301 (12%)
Query: 180 DDCSNILSMNNVKGT--YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL 237
+D +I +V GT ++ V + + T LVA+K I + EG + E+++L ++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI 73
Query: 238 RHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAY 295
+H NIV L DI + L L+ + + R ++ + + +FQ+L + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKY 131
Query: 296 CHSRRILHRDLKPQNLL---INERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
H I+HRDLKP+NLL ++E ++ ++DFGL++ + P S T Y P+V
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPEV- 189
Query: 353 LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCI 411
L YS ++D +G I + + G P F E++ +L I LK++ EF
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPF---YDENDAKLFEQI-------LKAEYEFD- 238
Query: 412 TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF---NSLGPQVH 468
+P + + + A D ++ + D ++R + A++HP+ +L +H
Sbjct: 239 SPYW-----------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
Query: 469 E 469
+
Sbjct: 288 Q 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LG G ++ V + + T LVA+K I + EG + E+++L +++H NIV L D
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 157 IIHTEKCLTLVFE 169
I + L L+ +
Sbjct: 84 IYESGGHLYLIMQ 96
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G++ V T VALK I +L + RE+S L+ LRH +I+ L+D+I
Sbjct: 19 EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI 78
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
T + +V EY +L Y+ + ++ + + F Q++ + YCH +I+HRDLKP+
Sbjct: 79 TTPTDIVMVIEYAGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPE 137
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLL+++ +K+ADFGL+ + + Y P+V+ G +D+ G
Sbjct: 138 NLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGI 196
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ + M GR F I + L K+ C+ + P+
Sbjct: 197 VLYVMLVGRLPFDDEFIPN---------------LFKKVNSCV-----------YVMPDF 230
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+ A L+++ ++ D QRI+ R P+FN
Sbjct: 231 LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELR 147
I Y + LG+G++ V T VALK I +L + RE+S L+ LR
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYM 179
H +I+ L+D+I T + +V EY +L Y+
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYAGGELFDYI 99
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 49/312 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ V K VALK ++ +E+ A E+ +L LR + ++IH
Sbjct: 107 KGSFGQVVKAYDHKVHQHVALKMVR--NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 252 EKCLT------LVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
+ T + FE L +L + S+ V+ F +L+ L H RI+H
Sbjct: 165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC 224
Query: 305 DLKPQNLLINERGE--LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
DLKP+N+L+ ++G +K+ DFG + + + + +YR P+V+LG+ Y I
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPEVILGA-RYGMPI 280
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL----KSKLEFCITPVYPS 417
DM +GCI E+ +G PL PG D+L + +LG P +L K F YP
Sbjct: 281 DMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPR 340
Query: 418 ESKLQLLA-------------------PEQM----------DSDALDLVQKFLMYDAKQR 448
+ L+ PE D LD +++ L +D R
Sbjct: 341 YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400
Query: 449 ISAANAMRHPYF 460
++ A+RHP+
Sbjct: 401 MTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 137/321 (42%), Gaps = 55/321 (17%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ V K VALK ++ E H + A E+ +L LR + ++
Sbjct: 107 KGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA-----EEIRILEHLRKQDKDNTMNV 161
Query: 249 IHTEKCLT------LVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRI 301
IH + T + FE L +L + S+ V+ F +L+ L H RI
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 302 LHRDLKPQNLLINERGE--LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYS 359
+H DLKP+N+L+ ++G +K+ DFG + + + + +YR P+V+LG+ Y
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPEVILGA-RYG 277
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL----KSKLEFCITPV 414
IDM +GCI E+ +G PL PG D+L + +LG P +L K F
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKG 337
Query: 415 YPSESKLQLLA-------------------PEQM----------DSDALDLVQKFLMYDA 445
YP + L+ PE D LD +++ L +D
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDP 397
Query: 446 KQRISAANAMRHPYFNSLGPQ 466
R++ A+RHP+ P+
Sbjct: 398 AVRMTPGQALRHPWLRRRLPK 418
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 36/279 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
G Y V + ++T A+K I K + + EV++L+ L H NI+ L+D
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED 107
Query: 252 EKCLTLVFE-YLEKDLKRYMDDCSNILSMNNV--KLFLFQLLRGLAYCHSRRILHRDLKP 308
++ LV E Y +L D+ + + N V + + Q+L G+ Y H I+HRDLKP
Sbjct: 108 KRNYYLVMECYKGGEL---FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKP 164
Query: 309 QNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+NLL+ + + +K+ DFGL+ A K + T +Y P+VL +Y D+
Sbjct: 165 ENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERLGTAYYIAPEVL--RKKYDEKCDVW 221
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + +G P F G T ++ LR + K K F +P + + S+
Sbjct: 222 SIGVILFILLAGYPPFGGQTDQEILRKV----------EKGKYTFD-SPEWKNVSE---- 266
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
A DL+++ L +D+++RISA A+ HP+ +
Sbjct: 267 -------GAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHA 149
E Y ++ KLG G Y V + ++T A+K I K + + EV++L+ L H
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NI+ L+D ++ LV E
Sbjct: 97 NIMKLYDFFEDKRNYYLVME 116
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 136/321 (42%), Gaps = 55/321 (17%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V K VALK ++ E H + A E+ +L LR + ++
Sbjct: 107 KGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA-----EEIRILEHLRKQDKDNTMNV 161
Query: 249 IHTEKCLT------LVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRRI 301
IH + T + FE L +L + S+ V+ F +L+ L H RI
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 302 LHRDLKPQNLLINERGE--LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYS 359
+H DLKP+N+L+ ++G +K+ DFG + + + + +YR P+V+LG+ Y
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYXXIQSRFYRAPEVILGA-RYG 277
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL----KSKLEFCITPV 414
IDM +GCI E+ +G PL PG D+L + +LG P +L K F
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKG 337
Query: 415 YPSESKLQLLA-------------------PEQM----------DSDALDLVQKFLMYDA 445
YP + L+ PE D LD +++ L +D
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDP 397
Query: 446 KQRISAANAMRHPYFNSLGPQ 466
R++ A+RHP+ P+
Sbjct: 398 AVRMTPGQALRHPWLRRRLPK 418
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 22/272 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G ++ V++ L VALK++++ + A I+E+ LL++L H N++ +
Sbjct: 42 RGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF 101
Query: 250 HTEKCLTLVFEYLEK-DLKR---YMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L +V E + DL R + ++ V + QL L + HSRR++HRD
Sbjct: 102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRD 161
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+KP N+ I G +KL D GL R S T + V T +Y P+ + + S
Sbjct: 162 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWS 221
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE---SKLQ 422
+GC+ +EM++ + F G D++ L L K+E C P PS+ +L+
Sbjct: 222 LGCLLYEMAALQSPFYG----DKMNLY---------SLCKKIEQCDYPPLPSDHYSEELR 268
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANA 454
L ++ D +YD +R+ A A
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 84 EIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVS 141
++G+ + ++ K+G+G ++ V++ L VALK++++ + A I+E+
Sbjct: 25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID 84
Query: 142 LLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 177
LL++L H N++ + + L +V E + DL R
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 44/281 (15%)
Query: 192 KGT---YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KGT YA F K RL+ + + ++E REV++LRE+RH NI+TLHDI
Sbjct: 27 KGTGKEYAAKFIKKRRLSSSRRGVSREEIE----------REVNILREIRHPNIITLHDI 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
+ + L+ E + +L ++ + + L+ + FL Q+L G+ Y HS+RI H DLK
Sbjct: 77 FENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLK 135
Query: 308 PQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
P+N+++ ++ +KL DFG+A K F N T + P++ + D
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFGTPEFVAPEI-VNYEPLGLEAD 193
Query: 364 M-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
M +G I + + SG F G T ++ L I ++ +E + + S+L
Sbjct: 194 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY-----------FSNTSEL- 241
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
A D +++ L+ D K+R++ A ++ H + ++
Sbjct: 242 ----------AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLL 143
+E ++++ ++LG G +A V K + + T A K IK G I REV++L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
RE+RH NI+TLHDI + + L+ E
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILE 88
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 47/285 (16%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 42 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 101
Query: 250 HTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+ LV E Y +L KR+ + D + I+ Q+L G+ Y H +
Sbjct: 102 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYMHKNK 152
Query: 301 ILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
I+HRDLKP+NLL+ + + +++ DFGL+ +K +++ T +Y P+VL G+ +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAPEVLHGTYD 211
Query: 358 YSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+ G I + + SG P F G+ D L+ + K K F
Sbjct: 212 EKCDV-WSTGVILYILLSGCPPFNGANEYDILKKV----------EKGKYTF-------- 252
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+L +++ A DL++K L Y RISA +A+ H + +
Sbjct: 253 ----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHD 156
LG+G++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 157 IIHTEKCLTLVFE 169
+ LV E
Sbjct: 100 FFEDKGYFYLVGE 112
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 47/285 (16%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 36 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95
Query: 250 HTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+ LV E Y +L KR+ + D + I+ Q+L G+ Y H +
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYMHKNK 146
Query: 301 ILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
I+HRDLKP+NLL+ + + +++ DFGL+ +K +++ T +Y P+VL G+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAPEVLHGTYD 205
Query: 358 YSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+ G I + + SG P F G+ D L+ + K K F
Sbjct: 206 EKCDV-WSTGVILYILLSGCPPFNGANEYDILKKVE----------KGKYTF-------- 246
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+L +++ A DL++K L Y RISA +A+ H + +
Sbjct: 247 ----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHD 156
LG+G++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 157 IIHTEKCLTLVFE 169
+ LV E
Sbjct: 94 FFEDKGYFYLVGE 106
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 47/285 (16%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 59 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 118
Query: 250 HTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+ LV E Y +L KR+ + D + I+ Q+L G+ Y H +
Sbjct: 119 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYMHKNK 169
Query: 301 ILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
I+HRDLKP+NLL+ + + +++ DFGL+ +K +++ T +Y P+VL G+ +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAPEVLHGTYD 228
Query: 358 YSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+ G I + + SG P F G+ D L+ + K K F
Sbjct: 229 EKCDV-WSTGVILYILLSGCPPFNGANEYDILKKV----------EKGKYTF-------- 269
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+L +++ A DL++K L Y RISA +A+ H + +
Sbjct: 270 ----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHD 156
LG+G++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 157 IIHTEKCLTLVFE 169
+ LV E
Sbjct: 117 FFEDKGYFYLVGE 129
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 47/285 (16%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 60 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 119
Query: 250 HTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+ LV E Y +L KR+ + D + I+ Q+L G+ Y H +
Sbjct: 120 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYMHKNK 170
Query: 301 ILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
I+HRDLKP+NLL+ + + +++ DFGL+ +K +++ T +Y P+VL G+ +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAPEVLHGTYD 229
Query: 358 YSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+ G I + + SG P F G+ D L+ + K K F
Sbjct: 230 EKCDV-WSTGVILYILLSGCPPFNGANEYDILKKV----------EKGKYTF-------- 270
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+L +++ A DL++K L Y RISA +A+ H + +
Sbjct: 271 ----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHD 156
LG+G++ V K ++T A+K I ++ + +REV LL++L H NI+ L++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 157 IIHTEKCLTLVFE 169
+ LV E
Sbjct: 118 FFEDKGYFYLVGE 130
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 192 KGT---YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KGT YA F K RL+ + + ++E REV++LRE+RH NI+TLHDI
Sbjct: 34 KGTGKEYAAKFIKKRRLSSSRRGVSREEIE----------REVNILREIRHPNIITLHDI 83
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
+ + L+ E + +L ++ + + L+ + FL Q+L G+ Y HS+RI H DLK
Sbjct: 84 FENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLK 142
Query: 308 PQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
P+N+++ ++ +KL DFG+A K F N T + P++ + D
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFGTPEFVAPEI-VNYEPLGLEAD 200
Query: 364 M-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
M +G I + + SG F G T ++ L I ++ +E + + S+L
Sbjct: 201 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY-----------FSNTSEL- 248
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
A D +++ L+ D K+R+ A ++ H + +
Sbjct: 249 ----------AKDFIRRLLVKDPKRRMXIAQSLEHSWIKA 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLL 143
+E ++++ ++LG G +A V K + + T A K IK G I REV++L
Sbjct: 10 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
RE+RH NI+TLHDI + + L+ E
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILE 95
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 44/281 (15%)
Query: 192 KGT---YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KGT YA F K RL + + ++E REV++LRE+RH NI+TLHDI
Sbjct: 48 KGTGKEYAAKFIKKRRLXSSRRGVSREEIE----------REVNILREIRHPNIITLHDI 97
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
+ + L+ E + +L ++ + + L+ + FL Q+L G+ Y HS+RI H DLK
Sbjct: 98 FENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLK 156
Query: 308 PQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
P+N+++ ++ +KL DFG+A K F N T + P++ + D
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFGTPEFVAPEI-VNYEPLGLEAD 214
Query: 364 M-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
M +G I + + SG F G T ++ L I ++ +E + + S+L
Sbjct: 215 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY-----------FSNTSEL- 262
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
A D +++ L+ D K+R+ A ++ H + ++
Sbjct: 263 ----------AKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIK----LEHEEGAPCTAI-REVSLL 143
+E ++++ ++LG G +A V K + + T A K IK G I REV++L
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
RE+RH NI+TLHDI + + L+ E
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILE 109
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ VF + + T+ A+K +K + ++ CT + + L H + +
Sbjct: 28 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 87
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T++ L V EYL DL ++ C ++ + +++ GL + HS+ I++RDLK
Sbjct: 88 FQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLK 146
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L+++ G +K+ADFG+ + + + T Y P++LLG +Y+ S+D
Sbjct: 147 LDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ-KYNHSVDWWSF 205
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM G+ F G +DE L SI P P
Sbjct: 206 GVLLYEMLIGQSPFHG---QDEEELFHSIRMDNP-----------------------FYP 239
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMR-HPYFNSL 463
++ +A DL+ K + + ++R+ +R HP F +
Sbjct: 240 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRE 145
+IE + LG+G++ VF + + T+ A+K +K + ++ CT + + L
Sbjct: 16 KIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKGTYATVFKGKSR 204
H + + T++ L V EYL DL ++ C ++ A + G
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQF 134
Query: 205 LTDNLVALKEIKLEH 219
L + +++KL++
Sbjct: 135 LHSKGIVYRDLKLDN 149
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 40/292 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG + V+ + + + +VALK + ++E +EG RE+ + L H NI+ L++
Sbjct: 33 KGKFGNVYLAREKKSHFIVALKVLFKSQIE-KEGVEHQLRREIEIQAHLHHPNILRLYNY 91
Query: 249 IHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ EY + K C+ + +L L YCH ++++HRD+
Sbjct: 92 FYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 307 KPQNLLINERGELKLADFGLA-RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
KP+NLL+ +GELK+ADFG + A S+ KT TL Y PP+++ G ++ +D+
Sbjct: 150 KPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG---TLDYLPPEMIEGRM-HNEKVDLW 205
Query: 366 -VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G + +E+ G P F ++ + R I K+ L
Sbjct: 206 CIGVLCYELLVGNPPFESASHNETYRRIV--------------------------KVDLK 239
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSI 476
P + + A DL+ K L ++ +R+ A HP+ + +V S QS+
Sbjct: 240 FPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQSV 291
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEI---KLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G + V+ + + + +VALK + ++E +EG RE+ + L H NI+ L+
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIE-KEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 156 DIIHTEKCLTLVFEY 170
+ + + + L+ EY
Sbjct: 90 NYFYDRRRIYLILEY 104
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 47/285 (16%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V K ++T A+K I ++ + +REV LL++L H NI L++
Sbjct: 36 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFF 95
Query: 250 HTEKCLTLVFE-YLEKDL-------KRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+ LV E Y +L KR+ + D + I+ Q+L G+ Y H +
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR---------QVLSGITYXHKNK 146
Query: 301 ILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE 357
I+HRDLKP+NLL+ + + +++ DFGL+ +K +++ T +Y P+VL G+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKXKDKIGTAYYIAPEVLHGTYD 205
Query: 358 YSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+ G I + + SG P F G+ D L+ + K K F
Sbjct: 206 EKCDV-WSTGVILYILLSGCPPFNGANEYDILKKV----------EKGKYTF-------- 246
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+L +++ A DL++K L Y RISA +A+ H + +
Sbjct: 247 ----ELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHD 156
LG+G++ V K ++T A+K I ++ + +REV LL++L H NI L++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 157 IIHTEKCLTLVFE 169
+ LV E
Sbjct: 94 FFEDKGYFYLVGE 106
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ VF + + T+ A+K +K + ++ CT + + L H + +
Sbjct: 27 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 86
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T++ L V EYL DL ++ C ++ + +++ GL + HS+ I++RDLK
Sbjct: 87 FQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLK 145
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L+++ G +K+ADFG+ + + + T Y P++LLG +Y+ S+D
Sbjct: 146 LDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ-KYNHSVDWWSF 204
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM G+ F G +DE L SI P P
Sbjct: 205 GVLLYEMLIGQSPFHG---QDEEELFHSIRMDNP-----------------------FYP 238
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMR-HPYFNSL 463
++ +A DL+ K + + ++R+ +R HP F +
Sbjct: 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRE 145
+IE + LG+G++ VF + + T+ A+K +K + ++ CT + + L
Sbjct: 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKGTYATVFKGKSR 204
H + + T++ L V EYL DL ++ C ++ A + G
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQF 133
Query: 205 LTDNLVALKEIKLEH 219
L + +++KL++
Sbjct: 134 LHSKGIVYRDLKLDN 148
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 17 KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 76
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 77 TEKTLYLVMEYASGGEVFDYLV-AHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 135
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ T Y P++ G +D+
Sbjct: 136 NLLLDADMNIKIADFGFSNE-----FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 190
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K
Sbjct: 191 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI--------------- 225
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSDTQ 474
P M +D +L++KFL+ + +R + M+ + N L P V L D +
Sbjct: 226 -PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYK 280
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEY 87
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G Y V K +LT A+K IK + + EV++L++L H NI+ L++
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 251 TEKCLTLVFE-YLEKDLKRYMDDC--SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
++ LV E Y +L D+ S + + + Q+L G Y H I+HRDLK
Sbjct: 75 DKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLK 131
Query: 308 PQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
P+NLL+ + +K+ DFGL+ V K + T +Y P+VL +Y D+
Sbjct: 132 PENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAPEVL--RKKYDEKCDV 188
Query: 365 -GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQL 423
G I + + G P F G T ++ L+ + K +F P P +
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRV------------EKGKFSFDP--PDWT---- 230
Query: 424 LAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVH 468
Q+ +A LV+ L Y+ +RISA A+ HP+ Q H
Sbjct: 231 ----QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKH 271
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRE 145
G + Y ++ KLG G Y V K +LT A+K IK + + EV++L++
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 146 LRHANIVTLHDIIHTEKCLTLVFE 169
L H NI+ L++ ++ LV E
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVME 84
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 44/267 (16%)
Query: 177 RYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 236
RY D I + +G + V K ++ L A+K+I+ H E T + EV LL
Sbjct: 3 RYASDFEEIAVLG--QGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVMLLAS 58
Query: 237 LRHANIVTLH-------------DIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVK 283
L H +V + + + L + EY E + N+ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 284 LFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR------------AK 330
LF Q+L L+Y HS+ I+HRDLKP N+ I+E +K+ DFGLA+ ++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 331 SVP--TKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGST--- 384
++P + ++ + T Y +VL G+ Y+ IDM +G IF EM ++P ST
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGME 233
Query: 385 ---IEDELRLICSILGPPPDELKSKLE 408
I +LR + P D+ K K+E
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVE 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 45/294 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ T Y P++ G +D+
Sbjct: 143 NLLLDADMNIKIADFGFSNE-----FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI--------------- 232
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSD 472
P M +D +L++KFL+ + +R + M+ + N L P V L D
Sbjct: 233 -PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPD 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEY 94
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G+Y +V+K + T +VA+K++ +E + I+E+S++++ ++V +
Sbjct: 39 EGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 252 EKCLTLVFEYLE----KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
L +V EY D+ R + L+ + + L L+GL Y H R +HRD+K
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL--LGSTEYSTSIDMG 365
N+L+N G KLADFG+A + + + T ++ P+V+ +G + +G
Sbjct: 153 AGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLA 425
+ I EM+ G+P P + I +R I I PP +
Sbjct: 213 ITAI--EMAEGKP--PYADIH-PMRAIFMIPTNPPPTFRK-------------------- 247
Query: 426 PEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
PE + D V++ L+ +QR +A ++HP+ S
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + L+KLG+G+Y +V+K + T +VA+K++ +E + I+E+S++++ +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPH 85
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
+V + L +V EY
Sbjct: 86 VVKYYGSYFKNTDLWIVMEY 105
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 44/267 (16%)
Query: 177 RYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 236
RY D I + +G + V K ++ L A+K+I+ H E T + EV LL
Sbjct: 3 RYASDFEEIAVLG--QGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVMLLAS 58
Query: 237 LRHANIVTLH-------------DIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVK 283
L H +V + + + L + EY E + N+ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 284 LFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR------------AK 330
LF Q+L L+Y HS+ I+HRDLKP N+ I+E +K+ DFGLA+ ++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 331 SVP--TKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGST--- 384
++P + ++ + T Y +VL G+ Y+ IDM +G IF EM ++P ST
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGME 233
Query: 385 ---IEDELRLICSILGPPPDELKSKLE 408
I +LR + P D+ K K+E
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVE 260
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 37/311 (11%)
Query: 175 LKRYMDDCSNILSMNNVKGT--YATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVS 232
K+ +D I GT ++ V + + T L A+K I + +G + E++
Sbjct: 13 WKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIA 72
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLL 290
+LR+++H NIV L DI + L LV + + R ++ + + + Q+L
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE--KGFYTEKDASTLIRQVL 130
Query: 291 RGLAYCHSRRILHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTFSNEVVTLWYR 347
+ Y H I+HRDLKP+NLL +E ++ ++DFGL++ + S T Y
Sbjct: 131 DAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG-KGDVMSTACGTPGYV 189
Query: 348 PPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSK 406
P+V L YS ++D +G I + + G P F E++ +L I LK++
Sbjct: 190 APEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD---ENDSKLFEQI-------LKAE 238
Query: 407 LEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF---NSL 463
EF +P + + + A D ++ + D +R + A RHP+ +L
Sbjct: 239 YEF-DSPYW-----------DDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTAL 286
Query: 464 GPQVHELSDTQ 474
+HE Q
Sbjct: 287 NKNIHESVSAQ 297
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
LG G ++ V + + T L A+K I + +G + E+++LR+++H NIV L DI
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 159 HTEKCLTLVFE 169
+ L LV +
Sbjct: 90 ESPNHLYLVMQ 100
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 45/294 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ T Y P++ G +D+
Sbjct: 143 NLLLDADMNIKIADFGFSNE-----FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI--------------- 232
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSD 472
P M +D +L++KFL+ + +R + M+ + N L P V L D
Sbjct: 233 -PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPD 285
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEY 94
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 30/237 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLF 287
E+S++ +L HAN++ L+D ++ + LV EY++ R +D+ N+ ++ + LF+
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI-LFMK 194
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG--ELKLADFGLARAKSVPTKTFSNEVVTLW 345
Q+ G+ + H ILH DLKP+N+L R ++K+ DFGLAR + P + T
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR-RYKPREKLKVNFGTPE 253
Query: 346 YRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELK 404
+ P+V + S DM VG I + + SG F G + L I + DE
Sbjct: 254 FLAPEV-VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE-- 310
Query: 405 SKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
EF + + +A + + K L+ + RISA+ A++HP+ +
Sbjct: 311 ---EF-----------------QDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 88 GRIESYFKLDK---LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLR 144
G + S++ + K LG G + V K + T +A K IK + E+S++
Sbjct: 83 GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK-NEISVMN 141
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNV 191
+L HAN++ L+D ++ + LV EY++ R +D+ N+ ++ +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R+L+H NIV LHD I E LVF E E + R S +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR------EFYSEADA 130
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L +AYCHS I+HR+LKP+NLL+ + + +KLADFGLA + ++ +
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHG 189
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+V L YS +D+ G I + + G P F ED+ RL I
Sbjct: 190 FAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYAQIKAG 245
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D YPS + + PE A L+ L + K+RI+A A++ P
Sbjct: 246 AYD-------------YPS-PEWDTVTPE-----AKSLIDSMLTVNPKKRITADQALKVP 286
Query: 459 YF 460
+
Sbjct: 287 WI 288
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHA 149
++Y ++LG+G ++ V + + T A K I + + RE + R+L+H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NIV LHD I E LVF+
Sbjct: 89 NIVRLHDSIQEESFHYLVFD 108
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R+L+H NIV LHD I E LVF E E + R S +
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR------EFYSEADA 106
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L +AYCHS I+HR+LKP+NLL+ + + +KLADFGLA + ++ +
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHG 165
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+V L YS +D+ G I + + G P F ED+ RL I
Sbjct: 166 FAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYAQIKAG 221
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D YPS + + PE A L+ L + K+RI+A A++ P
Sbjct: 222 AYD-------------YPS-PEWDTVTPE-----AKSLIDSMLTVNPKKRITADQALKVP 262
Query: 459 Y 459
+
Sbjct: 263 W 263
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHA 149
++Y ++LG+G ++ V + + T A K I + + RE + R+L+H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NIV LHD I E LVF+
Sbjct: 65 NIVRLHDSIQEESFHYLVFD 84
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 45/294 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA++ I K + + REV +++ L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ T Y P++ G +D+
Sbjct: 143 NLLLDADMNIKIADFGFSNE-----FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI--------------- 232
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSD 472
P M +D +L++KFL+ + +R + M+ + N L P V L D
Sbjct: 233 -PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPD 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA++ I K + + REV +++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEY 94
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R+L+H NIV LHD I E LVF E E + R S +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR------EFYSEADA 107
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L +AYCHS I+HR+LKP+NLL+ + + +KLADFGLA + ++ +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHG 166
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+V L YS +D+ G I + + G P F ED+ RL I
Sbjct: 167 FAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYAQIKAG 222
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D YPS + + PE A L+ L + K+RI+A A++ P
Sbjct: 223 AYD-------------YPS-PEWDTVTPE-----AKSLIDSMLTVNPKKRITADQALKVP 263
Query: 459 Y 459
+
Sbjct: 264 W 264
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHA 149
++Y ++LG+G ++ V + + T A K I + + RE + R+L+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NIV LHD I E LVF+
Sbjct: 66 NIVRLHDSIQEESFHYLVFD 85
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R+L+H NIV LHD I E LVF E E + R S +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR------EFYSEADA 107
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L +AYCHS I+HR+LKP+NLL+ + + +KLADFGLA + ++ +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHG 166
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+V L YS +D+ G I + + G P F ED+ RL I
Sbjct: 167 FAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYAQIKAG 222
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D YPS + + PE A L+ L + K+RI+A A++ P
Sbjct: 223 AYD-------------YPS-PEWDTVTPE-----AKSLIDSMLTVNPKKRITADQALKVP 263
Query: 459 Y 459
+
Sbjct: 264 W 264
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHA 149
++Y ++LG+G ++ V + + T A K I + + RE + R+L+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NIV LHD I E LVF+
Sbjct: 66 NIVRLHDSIQEESFHYLVFD 85
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ V K R+ VA+K IK +++ A EV LL + + + I+H
Sbjct: 64 KGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 252 EKC------LTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRR--IL 302
++ L LVFE L +L + + + +S+N + F Q+ L + + I+
Sbjct: 122 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSII 181
Query: 303 HRDLKPQNLLI--NERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
H DLKP+N+L+ +R +K+ DFG + + + + +YR P+VLLG Y
Sbjct: 182 HCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLG-MPYDL 237
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP 400
+IDM +GCI EM +G PLF G+ D++ I +LG PP
Sbjct: 238 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 29/271 (10%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V + R T N A K + HE T +E+ + LRH +V LHD +
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTMSVLRHPTLVNLHDAFEDD 120
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ +++E++ +L + D N +S + ++ Q+ +GL + H +H DLKP+N+
Sbjct: 121 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 180
Query: 312 LINER--GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGS-TEYSTSIDMGVGC 368
+ + ELKL DFGL A P ++ T + P+V G Y T + VG
Sbjct: 181 MFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDM-WSVGV 238
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ + + SG F G ++ LR + S C + + A
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKS---------------C-------DWNMDDSAFSG 276
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D ++K L+ D R++ A+ HP+
Sbjct: 277 ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
++LG G + V + R T N A K + HE T +E+ + LRH +V LHD
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTMSVLRHPTLVNLHD 115
Query: 157 IIHTEKCLTLVFEYL 171
+ + +++E++
Sbjct: 116 AFEDDNEMVMIYEFM 130
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ V K R+ VA+K IK +++ A EV LL + + + I+H
Sbjct: 45 KGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 102
Query: 252 EKC------LTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRR--IL 302
++ L LVFE L +L + + + +S+N + F Q+ L + + I+
Sbjct: 103 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSII 162
Query: 303 HRDLKPQNLLI--NERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
H DLKP+N+L+ +R +K+ DFG + + + + +YR P+VLLG Y
Sbjct: 163 HCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLG-MPYDL 218
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP 400
+IDM +GCI EM +G PLF G+ D++ I +LG PP
Sbjct: 219 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V + R T N A K + HE T +E+ + LRH +V LHD +
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTMSVLRHPTLVNLHDAFEDD 226
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ +++E++ +L + D N +S + ++ Q+ +GL + H +H DLKP+N+
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 286
Query: 312 LINER--GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGS-TEYSTSIDMGVGC 368
+ + ELKL DFGL A P ++ T + P+V G Y T + VG
Sbjct: 287 MFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDM-WSVGV 344
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ + + SG F G ++ LR + S C + + A
Sbjct: 345 LSYILLSGLSPFGGENDDETLRNVKS---------------C-------DWNMDDSAFSG 382
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
+ D D ++K L+ D R++ A+ HP+
Sbjct: 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
++LG G + V + R T N A K + HE T +E+ + LRH +V LHD
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTMSVLRHPTLVNLHD 221
Query: 157 IIHTEKCLTLVFEYL 171
+ + +++E++
Sbjct: 222 AFEDDNEMVMIYEFM 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G Y V K +LT A+K IK + + EV++L++L H NI+ L++
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 251 TEKCLTLVFE-YLEKDLKRYMDDC--SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
++ LV E Y +L D+ S + + + Q+L G Y H I+HRDLK
Sbjct: 92 DKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLK 148
Query: 308 PQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
P+NLL+ + +K+ DFGL+ V K + T +Y P+VL +Y D+
Sbjct: 149 PENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAPEVL--RKKYDEKCDV 205
Query: 365 -GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQL 423
G I + + G P F G T ++ L+ + K +F P P +
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRV------------EKGKFSFDP--PDWT---- 247
Query: 424 LAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
Q+ +A LV+ L Y+ +RISA A+ HP+ Q
Sbjct: 248 ----QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQ 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT 135
SS R++L G + Y ++ KLG G Y V K +LT A+K IK +
Sbjct: 8 SSGRENLYFQGLS--DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNS 65
Query: 136 A--IREVSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
+ EV++L++L H NI+ L++ ++ LV E
Sbjct: 66 GALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME 101
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G++ V T VALK I K+ + RE+S LR LRH +I+ L+D+I
Sbjct: 24 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 83
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + +V EY +L Y+ + +S + F Q++ + YCH +I+HRDLKP+
Sbjct: 84 KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLL++E +K+ADFGL+ + + Y P+V+ G +D+ G
Sbjct: 143 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 369 IFHEMSSGRPLFPGSTI 385
I + M R F +I
Sbjct: 202 ILYVMLCRRLPFDDESI 218
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRE 145
I +Y + LG+G++ V T VALK I K+ + RE+S LR
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 70
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYM 179
LRH +I+ L+D+I ++ + +V EY +L Y+
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI 104
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G++ V T VALK I K+ + RE+S LR LRH +I+ L+D+I
Sbjct: 14 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 73
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + +V EY +L Y+ + +S + F Q++ + YCH +I+HRDLKP+
Sbjct: 74 KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLL++E +K+ADFGL+ + + Y P+V+ G +D+ G
Sbjct: 133 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 369 IFHEMSSGRPLFPGSTI 385
I + M R F +I
Sbjct: 192 ILYVMLCRRLPFDDESI 208
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRE 145
I +Y + LG+G++ V T VALK I K+ + RE+S LR
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYM 179
LRH +I+ L+D+I ++ + +V EY +L Y+
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI 94
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G++ V T VALK I K+ + RE+S LR LRH +I+ L+D+I
Sbjct: 23 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + +V EY +L Y+ + +S + F Q++ + YCH +I+HRDLKP+
Sbjct: 83 KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 141
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLL++E +K+ADFGL+ + + Y P+V+ G +D+ G
Sbjct: 142 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 369 IFHEMSSGRPLFPGSTI 385
I + M R F +I
Sbjct: 201 ILYVMLCRRLPFDDESI 217
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRE 145
I +Y + LG+G++ V T VALK I K+ + RE+S LR
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 69
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYM 179
LRH +I+ L+D+I ++ + +V EY +L Y+
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI 103
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 40/302 (13%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G +A V LT +VA+K I ++ G+ I+ E+ L+ LRH +I L+ ++ T
Sbjct: 21 GGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET 79
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ +V EY +L Y+ + LS ++ Q++ +AY HS+ HRDLKP+N
Sbjct: 80 ANKIFMVLEYCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPEN 138
Query: 311 LLINERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
LL +E +LKL DFGL A+ K +L Y P+++ G + + D+
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV----- 193
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
S G L+ L+C L D + +Y + + P+ +
Sbjct: 194 ---WSMGILLYV---------LMCGFLPFDDDN--------VMALYKKIMRGKYDVPKWL 233
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY----------FNSLGPQVHELSDTQSIFSL 479
++ L+Q+ L D K+RIS N + HP+ + S P +H D + S+
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSV 293
Query: 480 PH 481
H
Sbjct: 294 HH 295
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 87 FGRIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLR 144
+ + Y++L + +G G +A V LT +VA+K I ++ G+ I+ E+ L+
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALK 63
Query: 145 ELRHANIVTLHDIIHTEKCLTLVFEY 170
LRH +I L+ ++ T + +V EY
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEY 89
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ Y P++ G +D+
Sbjct: 143 NLLLDADMNIKIADFGFSN-----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI--------------- 232
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSDTQ 474
P M +D +L++KFL+ + +R + M+ + N L P V L D +
Sbjct: 233 -PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYK 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEY 94
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 35/276 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 22 KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE 81
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L L+ EY ++ Y+ + + Q++ + YCH +RI+HRDLK +
Sbjct: 82 TEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAE 140
Query: 310 NLLINERGELKLADFGLARAKSVPTK--TFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ +K+ADFG + +V K TF + Y P++ G +D+ +
Sbjct: 141 NLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---SPPYAAPELFQGKKYDGPEVDVWSL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G I + + SG F G ++ ELR L+ K P Y
Sbjct: 198 GVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI---PFY----------- 233
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
M +D +L+++FL+ + +R + M+ + N+
Sbjct: 234 --MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L L+ EY
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEY 92
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G++ V T VALK I K+ + RE+S LR LRH +I+ L+D+I
Sbjct: 18 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 77
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + +V EY +L Y+ + +S + F Q++ + YCH +I+HRDLKP+
Sbjct: 78 KSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 136
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
NLL++E +K+ADFGL+ + + Y P+V+ G +D+ G
Sbjct: 137 NLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 369 IFHEMSSGRPLFPGSTI 385
I + M R F +I
Sbjct: 196 ILYVMLCRRLPFDDESI 212
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI--KLEHEEGAPCTAIREVSLLRE 145
I +Y + LG+G++ V T VALK I K+ + RE+S LR
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 146 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYM 179
LRH +I+ L+D+I ++ + +V EY +L Y+
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYI 98
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 18/221 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ V K R+ VA+K IK +++ A EV LL + + + I+H
Sbjct: 64 KGSFGQVVKAYDRVEQEWVAIKIIK--NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 252 EKC------LTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSRR--IL 302
++ L LVFE L +L + + + +S+N + F Q+ L + + I+
Sbjct: 122 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSII 181
Query: 303 HRDLKPQNLLI--NERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
H DLKP+N+L+ +R +K+ DFG + + + + +YR P+VLLG Y
Sbjct: 182 HCDLKPENILLCNPKRXAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLG-MPYDL 237
Query: 361 SIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPP 400
+IDM +GCI EM +G PLF G+ D++ I +LG PP
Sbjct: 238 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G+YA V + + TD + A+K +K E +E + + H +V LH
Sbjct: 30 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 89
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
TE L V EY+ DL +M L + + + ++ L Y H R I++RDLK
Sbjct: 90 FQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 148
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L++ G +KL D+G+ + P T S T Y P++L G +Y S+D +
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWAL 207
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + EM +GR F I+G + ++ ++ + Q+ P
Sbjct: 208 GVLMFEMMAGRSPF-------------DIVGSSDNPDQNTEDYLFQVILEK----QIRIP 250
Query: 427 EQMDSDALDLVQKFLMYDAKQRISA------ANAMRHPYFNSL 463
M A +++ FL D K+R+ A+ HP+F ++
Sbjct: 251 RSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 74 TRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE---HEE 130
TR S + S S +G ++ + L +G+G+YA V + + TD + A+K +K E +E
Sbjct: 7 TRESGKAS-SSLG---LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE 62
Query: 131 GAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 171
+ + H +V LH TE L V EY+
Sbjct: 63 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 103
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 39/242 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H NIV LHD I E LVF E E + R S +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADA 105
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L + +CH I+HRDLKP+NLL+ + + +KLADFGLA + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +DM G I + + G P F ED+ RL I
Sbjct: 166 FAGTPGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPFWD---EDQHRLYQQIKAG 221
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A DL+ K L + +RI+A+ A++HP
Sbjct: 222 AYD-------------FPS-PEWDTVTPE-----AKDLINKMLTINPAKRITASEALKHP 262
Query: 459 YF 460
+
Sbjct: 263 WI 264
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Query: 91 ESYFKLDKLGQGTYATV-----------FKGKSRLTDNLVALKEIKLEHEEGAPCTAIRE 139
+ Y ++LG+G ++ V + K T L A KLE RE
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE----------RE 53
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
+ R L+H NIV LHD I E LVF+
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H NIV LHD I E LVF E E + R S +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADA 105
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSN 339
+ Q+L + +CH I+HRDLKP+NLL+ + + +KLADFGLA + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +DM G I + + G P F ED+ RL I
Sbjct: 166 FAGTPGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPFWD---EDQHRLYQQIKAG 221
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A DL+ K L + +RI+A+ A++HP
Sbjct: 222 AYD-------------FPS-PEWDTVTPE-----AKDLINKMLTINPAKRITASEALKHP 262
Query: 459 Y 459
+
Sbjct: 263 W 263
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Query: 91 ESYFKLDKLGQGTYATV-----------FKGKSRLTDNLVALKEIKLEHEEGAPCTAIRE 139
+ Y ++LG+G ++ V + K T L A KLE RE
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE----------RE 53
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
+ R L+H NIV LHD I E LVF+
Sbjct: 54 ARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA++ I K + + REV +++ L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ Y P++ G +D+
Sbjct: 143 NLLLDADMNIKIADFGFSNE-----FTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G I + + SG F G ++ ELR L+ K P Y
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI---PFY--------- 235
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN------SLGPQVHELSDTQ 474
M +D +L++KFL+ + +R + M+ + N L P V L D +
Sbjct: 236 ----MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYK 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA++ I K + + REV +++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEY 94
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 37/302 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIRE-----VSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + RE VS+LR++ H NI+TLHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DL
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
KP+N+++ ++ +KL DFGLA + F N T + P++ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
DM +G I + + SG F G T ++ L I ++ +E S
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS---------------- 243
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSIFSLPH 481
Q A D ++K L+ + ++R++ A+RHP+ + Q + +S+ +L +
Sbjct: 244 ------QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQ-QAMVRRESVVNLEN 296
Query: 482 IK 483
K
Sbjct: 297 FK 298
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIRE-----VSL 142
++E ++ + ++LG G +A V K + + T A K IK + RE VS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H NI+TLHD+ + L+ E
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILE 95
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H NIV LHD I E L+F E E + R S +
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR------EYYSEADA 123
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSN 339
+ Q+L + +CH ++HRDLKP+NLL+ + +KLADFGLA + +
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +D+ G I + + G P F ED+ RL I
Sbjct: 184 FAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWD---EDQHRLYQQIKAG 239
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A DL+ K L + +RI+AA A++HP
Sbjct: 240 AYD-------------FPS-PEWDTVTPE-----AKDLINKMLTINPSKRITAAEALKHP 280
Query: 459 YFN 461
+ +
Sbjct: 281 WIS 283
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 83 SEIGFGRIESYFK-----LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI 137
S + G YF+ ++LG+G ++ V + L A K I + +
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 138 -REVSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
RE + R L+H NIV LHD I E L+F+
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFD 101
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 192 KGTYATVFKGKSRLTDN------LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 245
KG Y VF+ + N + LK+ + E ++L E++H IV L
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 246 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T L L+ EYL + I + +L ++ L + H + I++RD
Sbjct: 87 IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAK---SVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP+N+++N +G +KL DFGL + T TF T+ Y P++L+ S
Sbjct: 147 LKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG---TIEYMAPEILMRSGHNRAVD 203
Query: 363 DMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
+G + ++M +G P F G E+ + I IL K +
Sbjct: 204 WWSLGALMYDMLTGAPPFTG---ENRKKTIDKIL-----------------------KCK 237
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
L P + +A DL++K L +A R+ A HP+F +
Sbjct: 238 LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 35/276 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 25 KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE 84
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L L+ EY ++ Y+ + F Q++ + YCH +RI+HRDLK +
Sbjct: 85 TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKRIVHRDLKAE 143
Query: 310 NLLINERGELKLADFGLARAKSVPTK--TFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ +K+ADFG + +V K F Y P++ G +D+ +
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP---YAAPELFQGKKYDGPEVDVWSL 200
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G I + + SG F G ++ ELR L+ K P Y
Sbjct: 201 GVILYTLVSGSLPFDGQNLK-ELR---------ERVLRGKYRI---PFY----------- 236
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
M +D +L+++FL+ + +R + M+ + N+
Sbjct: 237 --MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV +++ L H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L L+ EY
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEY 95
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV +++ L H NIV L ++I
Sbjct: 25 KGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE 84
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + + Q++ + YCH + I+HRDLK +
Sbjct: 85 TEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAE 143
Query: 310 NLLINERGELKLADFGLARAKSVPTK--TFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ +K+ADFG + +V K TF + Y P++ G +D+ +
Sbjct: 144 NLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG---SPPYAAPELFQGKKYDGPEVDVWSL 200
Query: 367 GCIFHEMSSGRPLFPGSTIEDELR 390
G I + + SG F G ++ ELR
Sbjct: 201 GVILYTLVSGSLPFDGQNLK-ELR 223
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 94 FKLDK-LGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANI 151
++L K +G+G +A V + LT VA+K I K + + REV +++ L H NI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 152 VTLHDIIHTEKCLTLVFEY 170
V L ++I TEK L LV EY
Sbjct: 77 VKLFEVIETEKTLYLVMEY 95
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 192 KGTYATVFKGKSRLTDN------LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 245
KG Y VF+ + N + LK+ + E ++L E++H IV L
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 246 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T L L+ EYL + I + +L ++ L + H + I++RD
Sbjct: 87 IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRD 146
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM 364
LKP+N+++N +G +KL DFGL + +S+ T ++ T+ Y P++L+ S
Sbjct: 147 LKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWW 205
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLL 424
+G + ++M +G P F G E+ + I IL K +L
Sbjct: 206 SLGALMYDMLTGAPPFTG---ENRKKTIDKIL-----------------------KCKLN 239
Query: 425 APEQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
P + +A DL++K L +A R+ A HP+F +
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G+YA V + + TD + A+K +K E +E + + H +V LH
Sbjct: 15 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 74
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
TE L V EY+ DL +M L + + + ++ L Y H R I++RDLK
Sbjct: 75 FQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGIIYRDLK 133
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L++ G +KL D+G+ + P T S T Y P++L G +Y S+D +
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWAL 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + EM +GR F I+G + ++ ++ + Q+ P
Sbjct: 193 GVLMFEMMAGRSPF-------------DIVGSSDNPDQNTEDYLFQVILEK----QIRIP 235
Query: 427 EQMDSDALDLVQKFLMYDAKQRISA------ANAMRHPYFNSL 463
+ A +++ FL D K+R+ A+ HP+F ++
Sbjct: 236 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLH 155
+G+G+YA V + + TD + A+K +K E +E + + H +V LH
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 156 DIIHTEKCLTLVFEYL 171
TE L V EY+
Sbjct: 73 SCFQTESRLFFVIEYV 88
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + G I REVS+L+E++H N++TLH+
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ E + +L ++ + + L+ FL Q+L G+ Y HS +I H DL
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY---S 359
KP+N+++ +R +K+ DFGLA F NE ++ P V Y
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
DM +G I + + SG F G T ++ L + ++ DE + +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY-----------FSNT 244
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 245 SAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + G I REVS+L+E++H N++TLH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ E + +L ++ + + L+ FL Q+L G+ Y HS +I H DL
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY---S 359
KP+N+++ +R +K+ DFGLA F NE ++ P V Y
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
DM +G I + + SG F G T ++ L + ++ DE + +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY-----------FSNT 244
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 245 SAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 120
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 175
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 235
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 236 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILE 93
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANI 151
++LG G +A V K + + T A K IK + G I REVS+L+E++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 152 VTLHDIIHTEKCLTLVFE 169
+TLH++ + + L+ E
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + G I REVS+L+E++H N++TLH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ E + +L ++ + + L+ FL Q+L G+ Y HS +I H DL
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY---S 359
KP+N+++ +R +K+ DFGLA F NE ++ P V Y
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
DM +G I + + SG F G T ++ L + ++ DE + +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY-----------FSNT 244
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 245 SAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + G I REVS+L+E++H N++TLH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ E + +L ++ + + L+ FL Q+L G+ Y HS +I H DL
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY---S 359
KP+N+++ +R +K+ DFGLA F NE ++ P V Y
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
DM +G I + + SG F G T ++ L + ++ DE + +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY-----------FSNT 244
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 245 SAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G+YA V + + TD + A+K +K E +E + + H +V LH
Sbjct: 19 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 78
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
TE L V EY+ DL +M L + + + ++ L Y H R I++RDLK
Sbjct: 79 FQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGIIYRDLK 137
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L++ G +KL D+G+ + P T S T Y P++L G +Y S+D +
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWAL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + EM +GR F I+G + ++ ++ + Q+ P
Sbjct: 197 GVLMFEMMAGRSPF-------------DIVGSSDNPDQNTEDYLFQVILEK----QIRIP 239
Query: 427 EQMDSDALDLVQKFLMYDAKQRISA------ANAMRHPYFNSL 463
+ A +++ FL D K+R+ A+ HP+F ++
Sbjct: 240 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLH 155
+G+G+YA V + + TD + A+K +K E +E + + H +V LH
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 156 DIIHTEKCLTLVFEYL 171
TE L V EY+
Sbjct: 77 SCFQTESRLFFVIEYV 92
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 120
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 175
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 235
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 236 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILE 93
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 45/280 (16%)
Query: 195 YATVF--KGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
YA F K +SR + V+ +EI+ REVS+LR++ H N++TLHD+
Sbjct: 40 YAAKFIKKRQSRASRRGVSREEIE------------REVSILRQVLHHNVITLHDVYENR 87
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DLKP+N+
Sbjct: 88 TDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENI 146
Query: 312 LINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
++ ++ +KL DFGLA + F N T + P++ + DM +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEADMWSI 204
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G I + + SG F G T ++ L I S+ +E + S+L
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF-----------FSHTSEL----- 248
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
A D ++K L+ + ++R++ A+RHP+ + Q
Sbjct: 249 ------AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSL 142
++E ++ + ++LG G +A V K + + T A K IK G I REVS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H N++TLHD+ + L+ E
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANI 151
++LG G +A V K + + T A K IK + G I REVS+L+E++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 152 VTLHDIIHTEKCLTLVFE 169
+TLH++ + + L+ E
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK G I REVS+LR++ H N++TLHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DL
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
KP+N+++ ++ +KL DFGLA + F N T + P++ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
DM +G I + + SG F G T ++ L I S+ +E + S+L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF-----------FSHTSEL 248
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
A D ++K L+ + ++R++ A+RHP+ + Q
Sbjct: 249 -----------AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSL 142
++E ++ + ++LG G +A V K + + T A K IK G I REVS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H N++TLHD+ + L+ E
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 30/283 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G+YA V + + TD + A++ +K E +E + + H +V LH
Sbjct: 62 RGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 121
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
TE L V EY+ DL +M L + + + ++ L Y H R I++RDLK
Sbjct: 122 FQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 180
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N+L++ G +KL D+G+ + P T S T Y P++L G +Y S+D +
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWAL 239
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + EM +GR F I+G + ++ ++ + + Q+ P
Sbjct: 240 GVLMFEMMAGRSPF-------------DIVGSSDNPDQNTEDYLFQVIL----EKQIRIP 282
Query: 427 EQMDSDALDLVQKFLMYDAKQRISA------ANAMRHPYFNSL 463
+ A +++ FL D K+R+ A+ HP+F ++
Sbjct: 283 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 74 TRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE---HEE 130
TR S + S S +G ++ + L +G+G+YA V + + TD + A++ +K E +E
Sbjct: 39 TRESGKAS-SSLG---LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE 94
Query: 131 GAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 171
+ + H +V LH TE L V EY+
Sbjct: 95 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTLHD 247
KG ++ V + +R T A+K + + +P + RE S+ L+H +IV L +
Sbjct: 34 KGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE 93
Query: 248 IIHTEKCLTLVFEYLEKD------LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRI 301
++ L +VFE+++ +KR D + S ++ Q+L L YCH I
Sbjct: 94 TYSSDGMLYMVFEFMDGADLCFEIVKR--ADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 302 LHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY 358
+HRD+KP+N+L+ + +KL DFG+A V T + P+V + Y
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPY 210
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+D+ G G I + SG F G+ + RL I+ K ++ + P S
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGII---------KGKYKMNPRQWS 257
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ A DLV++ LM D +RI+ A+ HP+
Sbjct: 258 ----------HISESAKDLVRRMLMLDPAERITVYEALNHPW 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTL 154
+G+G ++ V + +R T A+K + + +P + RE S+ L+H +IV L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 155 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYA 196
+ ++ L +VFE+++ D C I+ + Y+
Sbjct: 92 LETYSSDGMLYMVFEFMDG-----ADLCFEIVKRADAGFVYS 128
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 36/285 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK G I REVS+LR++ H N++TLHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DL
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
KP+N+++ ++ +KL DFGLA + F N T + P++ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
DM +G I + + SG F G T ++ L I ++ +E S
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS---------------- 243
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
Q A D ++K L+ + ++R++ A+RHP+ + Q
Sbjct: 244 ------QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSL 142
++E ++ + ++LG G +A V K + + T A K IK G I REVS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H N++TLHD+ + L+ E
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 36/285 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK G I REVS+LR++ H N++TLHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DL
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
KP+N+++ ++ +KL DFGLA + F N T + P++ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
DM +G I + + SG F G T ++ L I ++ +E S
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS---------------- 243
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
Q A D ++K L+ + ++R++ A+RHP+ + Q
Sbjct: 244 ------QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSL 142
++E ++ + ++LG G +A V K + + T A K IK G I REVS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H N++TLHD+ + L+ E
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 56/288 (19%)
Query: 202 KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 261
K R +D+ K I+ HEE E+SLL+ L H NI+ L D+ +K LV E+
Sbjct: 76 KGRYSDDN---KNIEKFHEE-----IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127
Query: 262 ------LEKDLKRY-MDDC--SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
E+ + R+ D+C +NI+ Q+L G+ Y H I+HRD+KP+N+L
Sbjct: 128 YEGGELFEQIINRHKFDECDAANIMK---------QILSGICYLHKHNIVHRDIKPENIL 178
Query: 313 INERGEL---KLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
+ + L K+ DFGL+ S K + + T +Y P+VL +Y+ D+ G
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGV 235
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
I + + G P F G +D I V + +
Sbjct: 236 IMYILLCGYPPFGGQNDQD----------------------IIKKVEKGKYYFDFNDWKN 273
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELSDTQSI 476
+ +A +L++ L YD +R +A A+ + +++ SD +++
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINK-SDQKTL 320
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 23/103 (22%)
Query: 88 GRI-ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE-----------------HE 129
G+I ESYFK+ KLG G Y V K + + A+K IK HE
Sbjct: 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91
Query: 130 EGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
E E+SLL+ L H NI+ L D+ +K LV E+ E
Sbjct: 92 E-----IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE 129
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK G I REVS+LR++ H N++TLHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + L+ E + +L ++ + LS F+ Q+L G+ Y H+++I H DL
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
KP+N+++ ++ +KL DFGLA + F N T + P++ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
DM +G I + + SG F G T ++ L I S+ +E + S+L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF-----------FSHTSEL 248
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
A D ++K L+ + ++R++ A+RHP+ + Q
Sbjct: 249 -----------AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 89 RIESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEH----EEGAPCTAI-REVSL 142
++E ++ + ++LG G +A V K + + T A K IK G I REVS+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFE 169
LR++ H N++TLHD+ + L+ E
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANI 151
++LG G +A V K + + T A K IK + G I REVS+L+E++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 152 VTLHDIIHTEKCLTLVFE 169
+TLH++ + + L+ E
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLLRELRHANIVTLHD 247
G +A V K + + T A K IK + G I REVS+L+E++H N++TLH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 248 IIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ + + L+ E + +L ++ + + L+ FL Q+L G+ Y HS +I H DL
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDL 140
Query: 307 KPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY---S 359
KP+N+++ +R +K+ DFGLA F NE ++ P V Y
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 360 TSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSE 418
DM +G I + + SG F G T ++ L + ++ DE + +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY-----------FSNT 244
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 245 SAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 44/281 (15%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G ++ VF K RLT L ALK IK + + E+++L++++H NIVTL DI +
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 78
Query: 253 KCLTLVF------EYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
LV E ++ L+R + + + L + Q+L + Y H I+HRDL
Sbjct: 79 THYYLVMQLVSGGELFDRILER------GVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 307 KPQNLLI---NERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID 363
KP+NLL E ++ + DFGL++ + S T Y P+V L YS ++D
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQ--NGIMSTACGTPGYVAPEV-LAQKPYSKAVD 189
Query: 364 -MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKL-EFCITPVYPSESKL 421
+G I + + G P P +E +SKL E Y ES
Sbjct: 190 CWSIGVITYILLCGYP-------------------PFYEETESKLFEKIKEGYYEFESPF 230
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ + A D + L D +R + A+ HP+ +
Sbjct: 231 W----DDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+++ ++ LG G ++ VF K RLT L ALK IK + + E+++L++++H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSSLENEIAVLKKIKHEN 67
Query: 151 IVTLHDIIHTEKCLTLVFE 169
IVTL DI + LV +
Sbjct: 68 IVTLEDIYESTTHYYLVMQ 86
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 19 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 78
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 79 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 137
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 138 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 198 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 232 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEGLIFAKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 20 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 79
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 80 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 138
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 139 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 199 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 232
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 233 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H NIV LHD I E L+F E E + R S +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR------EYYSEADA 112
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSN 339
+ Q+L + +CH ++HR+LKP+NLL+ + +KLADFGLA + +
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +D+ G I + + G P F ED+ RL I
Sbjct: 173 FAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWD---EDQHRLYQQIKAG 228
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A DL+ K L + +RI+AA A++HP
Sbjct: 229 AYD-------------FPS-PEWDTVTPE-----AKDLINKMLTINPSKRITAAEALKHP 269
Query: 459 YFN 461
+ +
Sbjct: 270 WIS 272
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRL-----------TDNLVALKEIKLEHEEGAPCTAIRE 139
E Y ++LG+G ++ V + L T L A KLE RE
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE----------RE 60
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
+ R L+H NIV LHD I E L+F+
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFD 90
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 18 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 77
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 78 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 136
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 137 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 197 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 231 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 17 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 76
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 77 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 135
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 136 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 196 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 230 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REVS+L+E++H N++TLH++ + + L+ E + +L ++ + + L+ FL
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLK 121
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERG----ELKLADFGLARAKSVPTKTFSNEVVT 343
Q+L G+ Y HS +I H DLKP+N+++ +R +K+ DFGLA F NE
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKN 176
Query: 344 LWYRPPDVLLGSTEY---STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
++ P V Y DM +G I + + SG F G T ++ L + ++
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
DE + + S L A D +++ L+ D K+R++ ++++HP+
Sbjct: 237 EDEY-----------FSNTSAL-----------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IESYFKL-DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEE----GAPCTAI-REVSLL 143
++ Y+ ++LG G +A V K + + T A K IK + G I REVS+L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+E++H N++TLH++ + + L+ E
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILIGE 94
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 43 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 102
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 103 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 222 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 255
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 256 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 40 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 99
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 100 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 219 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 253 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 40 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 99
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 100 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 219 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 253 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 47 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCF 106
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 107 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 165
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 166 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 226 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 259
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 260 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 43 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 102
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 103 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 222 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 255
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 256 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 40 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 99
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 100 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 219 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 253 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 39 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 98
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 99 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 218 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 251
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 252 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEGLIFAKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 24 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 83
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 84 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 142
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 143 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 203 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 236
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 237 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 101
Query: 250 HTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 102 QDDEKLYFGLSYAKNGCLLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 221 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 254
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 39 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 98
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 99 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 218 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 251
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 252 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC-------TAIREVSLLRELR-HANIV 243
+G + V + R T + A+K +++ E +P RE +LR++ H +I+
Sbjct: 104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163
Query: 244 TLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
TL D + + LVF+ + K +L Y+ + LS + + LL +++ H+ I+
Sbjct: 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE----- 357
HRDLKP+N+L+++ +++L+DFG + P + T Y P++L S +
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Query: 358 YSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYP 416
Y +D+ G I + +G P F LR+I
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM----------------------- 318
Query: 417 SESKLQLLAPEQMD--SDALDLVQKFLMYDAKQRISAANAMRHPYF 460
E + Q +PE D S DL+ + L D + R++A A++HP+F
Sbjct: 319 -EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC-------TAIREVSLL 143
+ Y D +G+G + V + R T + A+K +++ E +P RE +L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 144 RELR-HANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKGTYATVFKG 201
R++ H +I+TL D + + LVF+ + K +L Y+ + LS + ++ +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEA 212
Query: 202 KSRLTDNLVALKEIKLEH 219
S L N + +++K E+
Sbjct: 213 VSFLHANNIVHRDLKPEN 230
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
KG +A V + LT VA+K I K + + REV + + L H NIV L ++I
Sbjct: 24 KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIE 83
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
TEK L LV EY ++ Y+ + Q++ + YCH + I+HRDLK +
Sbjct: 84 TEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 142
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW----YRPPDVLLGSTEYSTSIDM- 364
NLL++ +K+ADFG + TF N++ Y P++ G +D+
Sbjct: 143 NLLLDADXNIKIADFGFSN-----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELR 390
+G I + + SG F G ++ ELR
Sbjct: 198 SLGVILYTLVSGSLPFDGQNLK-ELR 222
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREVSLLRELRH 148
I +Y L +G+G +A V + LT VA+K I K + + REV + + L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
NIV L ++I TEK L LV EY
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEY 94
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 44/267 (16%)
Query: 177 RYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 236
RY D I + +G + V K ++ L A+K+I+ H E T + EV LL
Sbjct: 3 RYASDFEEIAVLG--QGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVXLLAS 58
Query: 237 LRHANIVTLH-------------DIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVK 283
L H +V + + + L + EY E + N+ +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 284 LFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR------------AK 330
LF Q+L L+Y HS+ I+HR+LKP N+ I+E +K+ DFGLA+ ++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 331 SVP--TKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIED 387
++P + ++ + T Y +VL G+ Y+ ID +G IF E ++P ST +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX-----IYPFSTGXE 233
Query: 388 ELRLI-----CSILGPPP-DELKSKLE 408
+ ++ SI PP D+ K K+E
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKXKVE 260
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
LGQG + V K ++ L A+K+I+ H E T + EV LL L H +V +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVXLLASLNHQYVVRYY 68
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
REV++L ++H NIV + L +V +Y E DL + ++ +L + L F
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 288 -QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWY 346
Q+ L + H R+ILHRD+K QN+ + + G ++L DFG+AR + + + T +Y
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 347 RPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP 399
P++ + S +GC+ +E+ + + F ++++ + I S PP
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 87 FGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL------EHEEGAPCTAIREV 140
F +E Y +L K+G+G++ KS +KEI + E EE REV
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESR-----REV 74
Query: 141 SLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
++L ++H NIV + L +V +Y E
Sbjct: 75 AVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++T + T A+K ++ H +E RE ++ L H V L+
Sbjct: 40 EGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 99
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 100 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 219 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 252
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
E+ A DLV+K L+ DA +R+ HP+F S+
Sbjct: 253 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLLRELRHANIVTLHDIIH 250
GT+ V GK LT + VA+K + + RE+ L+ RH +I+ L+ +I
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
T + +V EY+ +L Y+ + + +LF Q+L G+ YCH ++HRDLKP+
Sbjct: 87 TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ-QILSGVDYCHRHMVVHRDLKPE 145
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L++ K+ADFGL+ S + + Y P+V+ G +D+ G
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGV 204
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
I + + G F + + IC + P+
Sbjct: 205 ILYALLCGTLPFDDDHVPTLFKKICDGI--------------------------FYTPQY 238
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
++ + L++ L D +R + + H +F P+
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPK 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 86 GFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLL 143
G +I Y D LG GT+ V GK LT + VA+K + + RE+ L
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL 70
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFEYL 171
+ RH +I+ L+ +I T + +V EY+
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYV 98
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 226 TAIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVK 283
++EV +LR++ H NI+ L D T LVF+ ++K +L Y+ + LS +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 127
Query: 284 LFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVT 343
+ LL + H I+HRDLKP+N+L+++ +KL DFG + + P + + T
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRSVCGT 186
Query: 344 LWYRPPDVLLGSTE-----YSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG 397
Y P+++ S Y +DM G I + + +G P F LR+I S
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--- 243
Query: 398 PPPDELKSKLEFCITPVYPSESKLQLLAPEQMD-SDAL-DLVQKFLMYDAKQRISAANAM 455
Q +PE D SD + DLV +FL+ ++R +A A+
Sbjct: 244 ---------------------GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 282
Query: 456 RHPYFN 461
HP+F
Sbjct: 283 AHPFFQ 288
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL--------EHEEGAPCTAIRE 139
G E+Y + LG+G + V + + T A+K I + E + ++E
Sbjct: 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 73
Query: 140 VSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEK 173
V +LR++ H NI+ L D T LVF+ ++K
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 108
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 130/308 (42%), Gaps = 47/308 (15%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDIIH 250
G + + +LT LVA+K I E GA RE+ R LRH NIV ++I
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYI----ERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 251 TEKCLTLVFEYLEKDLKRYMDDC-SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
T L ++ EY + Y C + S + + F QLL G++YCHS +I HRDLK +
Sbjct: 87 TPTHLAIIMEYASGG-ELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLE 145
Query: 310 NLLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID--MG 365
N L++ LK+ DFG +++ + ++ S V T Y P+VLL EY I
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL-RQEYDGKIADVWS 203
Query: 366 VGCIFHEMSSGRPLFPGSTIED------ELRLICSILGPPPDELKSKLEFCITPVYPSES 419
G + M G +P E+ ++ I S+ PD+++ E C
Sbjct: 204 CGVTLYVMLVG--AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC--------- 252
Query: 420 KLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF-NSLGPQVHELSDTQSIFS 478
L+ + + D RIS H +F +L + S+T S F
Sbjct: 253 ---------------HLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQ 297
Query: 479 LPHIKLTS 486
P + S
Sbjct: 298 EPEQPMQS 305
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRH 148
+ Y + +G G + + +LT LVA+K I E GA RE+ R LRH
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI----ERGAAIDENVQREIINHRSLRH 75
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDC-SNILSMNNVKGTYATVFKGKSRLTD 207
NIV ++I T L ++ EY + Y C + S + + + + G S
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGG-ELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 208 NLVALKEIKLEHE--EGAPCTAIR 229
+ +++KLE+ +G+P ++
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLK 158
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 226 TAIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVK 283
++EV +LR++ H NI+ L D T LVF+ ++K +L Y+ + LS +
Sbjct: 56 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 114
Query: 284 LFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVT 343
+ LL + H I+HRDLKP+N+L+++ +KL DFG + + P + T
Sbjct: 115 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGT 173
Query: 344 LWYRPPDVLLGSTE-----YSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG 397
Y P+++ S Y +DM G I + + +G P F LR+I S
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--- 230
Query: 398 PPPDELKSKLEFCITPVYPSESKLQLLAPEQMD-SDAL-DLVQKFLMYDAKQRISAANAM 455
Q +PE D SD + DLV +FL+ ++R +A A+
Sbjct: 231 ---------------------GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 269
Query: 456 RHPYFN 461
HP+F
Sbjct: 270 AHPFFQ 275
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 88 GRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL--------EHEEGAPCTAIRE 139
G E+Y + LG+G + V + + T A+K I + E + ++E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 140 VSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEK 173
V +LR++ H NI+ L D T LVF+ ++K
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 95
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 226 TAIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVK 283
++EV +LR++ H NI+ L D T LVF+ ++K +L Y+ + LS +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 127
Query: 284 LFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVT 343
+ LL + H I+HRDLKP+N+L+++ +KL DFG + + P + T
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGT 186
Query: 344 LWYRPPDVLLGSTE-----YSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILG 397
Y P+++ S Y +DM G I + + +G P F LR+I S
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--- 243
Query: 398 PPPDELKSKLEFCITPVYPSESKLQLLAPEQMD-SDAL-DLVQKFLMYDAKQRISAANAM 455
Q +PE D SD + DLV +FL+ ++R +A A+
Sbjct: 244 ---------------------GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 282
Query: 456 RHPYFN 461
HP+F
Sbjct: 283 AHPFFQ 288
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H+NIV LHD I E LVF E E + R S +
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADA 105
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSN 339
+ Q+L + +CH ++HRDLKP+NLL+ + +KLADFGLA + +
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +D+ G I + + G P F ED+ +L I
Sbjct: 166 FAGTPGYLSPEVLRKEA-YGKPVDIWACGVILYILLVGYPPFWD---EDQHKLYQQIKAG 221
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A +L+ + L + +RI+A A++HP
Sbjct: 222 AYD-------------FPS-PEWDTVTPE-----AKNLINQMLTINPAKRITAHEALKHP 262
Query: 459 Y 459
+
Sbjct: 263 W 263
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHA 149
+ Y + +G+G ++ V + T + A K I + + RE + R L+H+
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 150 NIVTLHDIIHTEKCLTLVFE 169
NIV LHD I E LVF+
Sbjct: 64 NIVRLHDSISEEGFHYLVFD 83
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 79 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 138
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 193
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 249
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 250 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 77 SRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA 136
+++Q + E+ + + + K+ +LG G VFK + + ++A K I LE +
Sbjct: 57 TQKQKVGEL---KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 113
Query: 137 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
IRE+ +L E IV + +++ +++ E+++
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 149
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 141/331 (42%), Gaps = 72/331 (21%)
Query: 192 KGTYATVF------KGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHAN--- 241
+GT+ V +GKS+ VALK I+ G A R E+++L++++ +
Sbjct: 61 EGTFGKVVECLDHARGKSQ-----VALKIIR---NVGKYREAARLEINVLKKIKEKDKEN 112
Query: 242 ---IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCH 297
V + D + + + FE L K+ ++ + + + +V+ +QL L + H
Sbjct: 113 KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 172
Query: 298 SRRILHRDLKPQNLL-INERGE------------------LKLADFGLARAKSVPTKTFS 338
++ H DLKP+N+L +N E +++ADFG A TF
Sbjct: 173 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------TFD 224
Query: 339 NE-----VVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLIC 393
+E V T YRPP+V+L +GCI E G LF + L ++
Sbjct: 225 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
Query: 394 SILGPPPDEL-----KSKLEFCITPVYPSESKLQLLAPEQ-------MDSDAL------D 435
ILGP P + K K + V+ S E M D+L D
Sbjct: 285 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 344
Query: 436 LVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
L+++ L +D QRI+ A A+ HP+F L P+
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFFAGLTPE 375
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 141/331 (42%), Gaps = 72/331 (21%)
Query: 192 KGTYATVF------KGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHAN--- 241
+GT+ V +GKS+ VALK I+ G A R E+++L++++ +
Sbjct: 38 EGTFGKVVECLDHARGKSQ-----VALKIIR---NVGKYREAARLEINVLKKIKEKDKEN 89
Query: 242 ---IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCH 297
V + D + + + FE L K+ ++ + + + +V+ +QL L + H
Sbjct: 90 KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 149
Query: 298 SRRILHRDLKPQNLL-INERGE------------------LKLADFGLARAKSVPTKTFS 338
++ H DLKP+N+L +N E +++ADFG A TF
Sbjct: 150 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------TFD 201
Query: 339 NE-----VVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLIC 393
+E V T YRPP+V+L +GCI E G LF + L ++
Sbjct: 202 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
Query: 394 SILGPPPDEL-----KSKLEFCITPVYPSESKLQLLAPEQ-------MDSDAL------D 435
ILGP P + K K + V+ S E M D+L D
Sbjct: 262 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 321
Query: 436 LVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
L+++ L +D QRI+ A A+ HP+F L P+
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFFAGLTPE 352
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 141/331 (42%), Gaps = 72/331 (21%)
Query: 192 KGTYATVF------KGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHAN--- 241
+GT+ V +GKS+ VALK I+ G A R E+++L++++ +
Sbjct: 29 EGTFGKVVECLDHARGKSQ-----VALKIIR---NVGKYREAARLEINVLKKIKEKDKEN 80
Query: 242 ---IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCH 297
V + D + + + FE L K+ ++ + + + +V+ +QL L + H
Sbjct: 81 KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140
Query: 298 SRRILHRDLKPQNLL-INERGE------------------LKLADFGLARAKSVPTKTFS 338
++ H DLKP+N+L +N E +++ADFG A TF
Sbjct: 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------TFD 192
Query: 339 NE-----VVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLIC 393
+E V T YRPP+V+L +GCI E G LF + L ++
Sbjct: 193 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 394 SILGPPPDEL-----KSKLEFCITPVYPSESKLQLLAPEQ-------MDSDAL------D 435
ILGP P + K K + V+ S E M D+L D
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 436 LVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
L+++ L +D QRI+ A A+ HP+F L P+
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 103
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 158
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 214
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 77 SRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA 136
+++Q + E+ + + + K+ +LG G VFK + + ++A K I LE +
Sbjct: 22 TQKQKVGEL---KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 78
Query: 137 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
IRE+ +L E IV + +++ +++ E+++
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
+G+++TV + T A+K ++ H +E RE ++ L H V L+
Sbjct: 45 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 104
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
++ L Y + +L +Y+ + + + +++ L Y H + I+HRDLKP
Sbjct: 105 QDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 163
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTF-SNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
+N+L+NE +++ DFG A+ S +K +N V T Y P++L + +S +
Sbjct: 164 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
GCI +++ +G P F +E + I+ KL+ P
Sbjct: 224 GCIIYQLVAGLPPFRAG---NEYLIFQKII-----------------------KLEYDFP 257
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNSL 463
A DLV+K L+ DA +R+ HP+F S+
Sbjct: 258 AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 95
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 96 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 150
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 151 KPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 206
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPPDELKS---KLEF 409
+G EM+ GR P+ GS L+ I+ PP +L S LEF
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEF 255
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 77 SRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA 136
+++Q + E+ + + + K+ +LG G VFK + + ++A K I LE +
Sbjct: 14 TQKQKVGEL---KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 70
Query: 137 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
IRE+ +L E IV + +++ +++ E+++
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 106
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KGTY V+ G+ +A+KEI E + E++L + L+H NIV
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ + E + L + L N + + Q+L GL Y H +I+HRD+K
Sbjct: 91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 309 QNLLINE-RGELKLADFGLAR--AKSVP-TKTFSNEVVTLWYRPPDVL-LGSTEYSTSID 363
N+LIN G LK++DFG ++ A P T+TF+ TL Y P+++ G Y + D
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEIIDKGPRGYGKAAD 207
Query: 364 M-GVGCIFHEMSSGRPLF 380
+ +GC EM++G+P F
Sbjct: 208 IWSLGCTIIEMATGKPPF 225
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
LG+GTY V+ G+ +A+KEI E + E++L + L+H NIV
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIV 82
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 22/269 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K +++ T L A K I + EE + E+ +L H NIV L D + E
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYE 106
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ + +++ Q L L Y H +I+HRDLK N+
Sbjct: 107 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFH 371
L G++KLADFG++ + + + + T ++ P+V++ T D
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV--- 223
Query: 372 EMSSGRPLFPGSTIEDELRLICSILGPPPDELKS-KLEFCITPVYPSESKLQLLAPEQMD 430
S G L + IE PP EL ++ I P L P +
Sbjct: 224 -WSLGITLIEMAEIE-----------PPHHELNPMRVLLKIAKSEPP----TLAQPSRWS 267
Query: 431 SDALDLVQKFLMYDAKQRISAANAMRHPY 459
S+ D ++K L + R + + ++HP+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+ +LG G + V+K +++ T L A K I + EE + E+ +L H NIV L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLL 100
Query: 156 DIIHTEKCLTLVFEY 170
D + E L ++ E+
Sbjct: 101 DAFYYENNLWILIEF 115
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 22/269 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K +++ T L A K I + EE + E+ +L H NIV L D + E
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYE 106
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ + +++ Q L L Y H +I+HRDLK N+
Sbjct: 107 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFH 371
L G++KLADFG++ + + + + T ++ P+V++ T D
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV--- 223
Query: 372 EMSSGRPLFPGSTIEDELRLICSILGPPPDELKS-KLEFCITPVYPSESKLQLLAPEQMD 430
S G L + IE PP EL ++ I P L P +
Sbjct: 224 -WSLGITLIEMAEIE-----------PPHHELNPMRVLLKIAKSEPP----TLAQPSRWS 267
Query: 431 SDALDLVQKFLMYDAKQRISAANAMRHPY 459
S+ D ++K L + R + + ++HP+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+ +LG G + V+K +++ T L A K I + EE + E+ +L H NIV L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLL 100
Query: 156 DIIHTEKCLTLVFEY 170
D + E L ++ E+
Sbjct: 101 DAFYYENNLWILIEF 115
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 76
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 131
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMD 87
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KGTY V+ G+ +A+KEI E + E++L + L+H NIV
Sbjct: 18 KGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 76
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ + E + L + L N + + Q+L GL Y H +I+HRD+K
Sbjct: 77 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 136
Query: 309 QNLLINE-RGELKLADFGLAR--AKSVP-TKTFSNEVVTLWYRPPDVL-LGSTEYSTSID 363
N+LIN G LK++DFG ++ A P T+TF+ TL Y P+++ G Y + D
Sbjct: 137 DNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG---TLQYMAPEIIDKGPRGYGKAAD 193
Query: 364 M-GVGCIFHEMSSGRPLF 380
+ +GC EM++G+P F
Sbjct: 194 IWSLGCTIIEMATGKPPF 211
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
LG+GTY V+ G+ +A+KEI E + E++L + L+H NIV
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIV 68
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 76
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 131
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMD 87
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 24/274 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K K++ T L A K I+ + EE I E+ +L H IV L + +
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAYYHD 88
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ +++ Q+L L + HS+RI+HRDLK N+
Sbjct: 89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 148
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L+ G+++LADFG++ AK++ T + + T ++ P+V++ T T D
Sbjct: 149 LMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI-- 205
Query: 371 HEMSSGRPLFPGSTIEDELRLICSILGPPPDELKS-KLEFCITPVYPSESKLQLLAPEQM 429
S G L + IE PP EL ++ I P LL P +
Sbjct: 206 --WSLGITLIEMAQIE-----------PPHHELNPMRVLLKIAKSDPP----TLLTPSKW 248
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
+ D ++ L + + R SAA + HP+ +S+
Sbjct: 249 SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + + +LG G + V+K K++ T L A K I+ + EE I E+ +L H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPY 77
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV L + + L ++ E+
Sbjct: 78 IVKLLGAYYHDGKLWIMIEF 97
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 23 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 78
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q RG+ Y H++ I+HRDLK N
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN 138
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + S YS D+
Sbjct: 139 IFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 198
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 199 FGIVLYELMTGQ--LPYSNINNRDQII 223
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 19 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 76 -YSTKPQLAIVTQWCE 90
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 22/269 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K +++ T L A K I + EE + E+ +L H NIV L D + E
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYE 106
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ + +++ Q L L Y H +I+HRDLK N+
Sbjct: 107 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFH 371
L G++KLADFG++ + + + T ++ P+V++ T D
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADV--- 223
Query: 372 EMSSGRPLFPGSTIEDELRLICSILGPPPDELKS-KLEFCITPVYPSESKLQLLAPEQMD 430
S G L + IE PP EL ++ I P L P +
Sbjct: 224 -WSLGITLIEMAEIE-----------PPHHELNPMRVLLKIAKSEPP----TLAQPSRWS 267
Query: 431 SDALDLVQKFLMYDAKQRISAANAMRHPY 459
S+ D ++K L + R + + ++HP+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+ +LG G + V+K +++ T L A K I + EE + E+ +L H NIV L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLL 100
Query: 156 DIIHTEKCLTLVFEY 170
D + E L ++ E+
Sbjct: 101 DAFYYENNLWILIEF 115
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 24/274 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K K++ T L A K I+ + EE I E+ +L H IV L + +
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAYYHD 80
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ +++ Q+L L + HS+RI+HRDLK N+
Sbjct: 81 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 140
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L+ G+++LADFG++ AK++ T + + T ++ P+V++ T T D
Sbjct: 141 LMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI-- 197
Query: 371 HEMSSGRPLFPGSTIEDELRLICSILGPPPDELKS-KLEFCITPVYPSESKLQLLAPEQM 429
S G L + IE PP EL ++ I P LL P +
Sbjct: 198 --WSLGITLIEMAQIE-----------PPHHELNPMRVLLKIAKSDPP----TLLTPSKW 240
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
+ D ++ L + + R SAA + HP+ +S+
Sbjct: 241 SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 274
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + + +LG G + V+K K++ T L A K I+ + EE I E+ +L H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPY 69
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV L + + L ++ E+
Sbjct: 70 IVKLLGAYYHDGKLWIMIEF 89
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 76
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 131
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMD 87
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 76
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 131
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILG 397
+G EM+ GR P+ P E EL C + G
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMD 87
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 229 REVSLLRELRHANIVTLHDIIH--TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFL 286
+E+++L++L H N+V L +++ E L +VFE + + + LS + + +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYF 143
Query: 287 FQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWY 346
L++G+ Y H ++I+HRD+KP NLL+ E G +K+ADFG++ SN V T +
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 347 RPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIED---ELRLICSILGPPPDEL 403
P+ L S R +F G ++ + L C + G P
Sbjct: 204 MAPESL---------------------SETRKIFSGKALDVWAMGVTLYCFVFGQCP--F 240
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMD--SDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ C+ S++ L P+Q D D DL+ + L + + RI HP+
Sbjct: 241 MDERIMCLHSKIKSQA---LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ VFKG T +VA+K I LE E +E+++L + + +
Sbjct: 32 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 91
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ L ++ EYL + + L + L ++L+GL Y HS + +HRD+K N+
Sbjct: 92 DTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANV 150
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L++E GE+KLADFG+A + T+ N V T ++ P+V+ S S + +G
Sbjct: 151 LLSEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209
Query: 371 HEMSSGRP 378
E++ G P
Sbjct: 210 IELARGEP 217
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KL+K+G+G++ VFKG T +VA+K I LE E +E+++L +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
+ + + L ++ EYL
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYL 102
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ VFKG T +VA+K I LE E +E+++L + + + +
Sbjct: 33 KGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLK 92
Query: 252 EKCLTLVFEYLEK----DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
L ++ EYL DL R + + L ++L+GL Y HS + +HRD+K
Sbjct: 93 GSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGV 366
N+L++E+G++KLADFG+A + T+ N V T ++ P+V+ S S + +
Sbjct: 148 AANVLLSEQGDVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSL 206
Query: 367 GCIFHEMSSGRP 378
G E++ G P
Sbjct: 207 GITAIELAKGEP 218
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KL+++G+G++ VFKG T +VA+K I LE E +E+++L + +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
+ + L ++ EYL
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYL 103
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 27/235 (11%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 76
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 131
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDE------LRLICSILGPPPDELKS---KLEF 409
+G EM+ GR P+ P ED L+ I+ PP +L S LEF
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 242
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMD 87
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ VFKG T +VA+K I LE E +E+++L + + +
Sbjct: 37 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 96
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ L ++ EYL + + L + L ++L+GL Y HS + +HRD+K N+
Sbjct: 97 DTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANV 155
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L++E GE+KLADFG+A + T+ N V T ++ P+V+ S S + +G
Sbjct: 156 LLSEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 214
Query: 371 HEMSSGRP 378
E++ G P
Sbjct: 215 IELARGEP 222
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KL+K+G+G++ VFKG T +VA+K I LE E +E+++L +
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
+ + + L ++ EYL
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYL 107
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 35 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 90
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q RG+ Y H++ I+HRDLK N
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN 150
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + S YS D+
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 211 FGIVLYELMTGQ--LPYSNINNRDQII 235
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 31 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 88 -YSTKPQLAIVTQWCE 102
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELRHANIVTLHDII-- 249
G+Y K + + ++ KE+ E + EV+LLREL+H NIV +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCS---NILSMNNVKLFLFQLLRGLAYCHSRR----- 300
T L +V EY E DL + + L V + QL L CH R
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
+LHRDLKP N+ ++ + +KL DFGLAR + T V T +Y P+ + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
Query: 361 SIDMGVGCIFHEMSSGRPLF 380
S +GC+ +E+ + P F
Sbjct: 197 SDIWSLGCLLYELCALMPPF 216
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELR 147
R E Y L +G G+Y K + + ++ KE+ E + EV+LLREL+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 148 HANIVTLHDII--HTEKCLTLVFEYLE 172
H NIV +D I T L +V EY E
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCE 90
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ VFKG T +VA+K I LE E +E+++L + + +
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ L ++ EYL + + L + L ++L+GL Y HS + +HRD+K N+
Sbjct: 77 DTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANV 135
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L++E GE+KLADFG+A + T+ N V T ++ P+V+ S S + +G
Sbjct: 136 LLSEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 371 HEMSSGRP 378
E++ G P
Sbjct: 195 IELARGEP 202
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KL+K+G+G++ VFKG T +VA+K I LE E +E+++L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
+ + + L ++ EYL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYL 87
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ VFKG T +VA+K I LE E +E+++L + + +
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ L ++ EYL + + L + L ++L+GL Y HS + +HRD+K N+
Sbjct: 77 DTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANV 135
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
L++E GE+KLADFG+A + T+ N V T ++ P+V+ S S + +G
Sbjct: 136 LLSEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 371 HEMSSGRP 378
E++ G P
Sbjct: 195 IELARGEP 202
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KL+K+G+G++ VFKG T +VA+K I LE E +E+++L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
+ + + L ++ EYL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYL 87
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 72
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELRH 148
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ RH
Sbjct: 9 YLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRH 64
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
+ L T L V EY
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEY 86
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 182
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 232
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 233 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 181
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 231
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 232 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 188
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 238
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 239 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 72
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELRH 148
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ RH
Sbjct: 9 YLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRH 64
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
+ L T L V EY
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEY 86
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 18 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 75
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 135
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 136 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGL 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 195 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 228
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 229 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 273
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELRH 148
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ RH
Sbjct: 12 YLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRH 67
Query: 149 ANIVTLHDIIHTEKCLTLVFEY 170
+ L T L V EY
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEY 89
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 182
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 232
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 233 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 182
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 232
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 233 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 35 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 90
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V ++ E L ++ M + Q RG+ Y H++ I+HRDLK N
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN 150
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + S YS D+
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 211 FGIVLYELMTGQ--LPYSNINNRDQII 235
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 31 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 157 IIHTEKCLTLVFEYLE 172
T L +V ++ E
Sbjct: 88 -YSTAPQLAIVTQWCE 102
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 72
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWGL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 8/131 (6%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELRH 148
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ RH
Sbjct: 9 YLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRH 64
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
+ L T L V EY + + + + A + L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 209 LVALKEIKLEH 219
V ++IKLE+
Sbjct: 125 DVVYRDIKLEN 135
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELRHANIVTLHDII-- 249
G+Y K + + ++ KE+ E + EV+LLREL+H NIV +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCS---NILSMNNVKLFLFQLLRGLAYCHSRR----- 300
T L +V EY E DL + + L V + QL L CH R
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
+LHRDLKP N+ ++ + +KL DFGLAR + T V T +Y P+ + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
Query: 361 SIDMGVGCIFHEMSSGRPLF 380
S +GC+ +E+ + P F
Sbjct: 197 SDIWSLGCLLYELCALMPPF 216
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELR 147
R E Y L +G G+Y K + + ++ KE+ E + EV+LLREL+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 148 HANIVTLHDII--HTEKCLTLVFEYLE 172
H NIV +D I T L +V EY E
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCE 90
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 20 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 77
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 137
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWGL 196
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 197 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 231 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 275
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELR 147
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ R
Sbjct: 13 DYLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTR 68
Query: 148 HANIVTLHDIIHTEKCLTLVFEY 170
H + L T L V EY
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEY 91
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 72
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWGL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 8/131 (6%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELRH 148
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ RH
Sbjct: 9 YLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRH 64
Query: 149 ANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
+ L T L V EY + + + + A + L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 209 LVALKEIKLEH 219
V ++IKLE+
Sbjct: 125 DVVYRDIKLEN 135
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V + + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTRHPFLTALKY 72
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY + + + + + +++ L Y HSR +++RD+K
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIK 132
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWGL 191
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + +EM GR F E LI L ++ F P
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELI----------LMEEIRF----------------P 225
Query: 427 EQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSLGPQ 466
+ +A L+ L D KQR+ A M H +F S+ Q
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 270
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 92 SYFKLDKLGQGTYATVFKGKSRLTDNLVAL----KEIKLEHEEGAPCTAIREVSLLRELR 147
Y KL LG+GT+ V + + T A+ KE+ + +E A + E +L+ R
Sbjct: 8 DYLKL--LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--HTVTESRVLQNTR 63
Query: 148 HANIVTLHDIIHTEKCLTLVFEY 170
H + L T L V EY
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEY 86
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G++ V+ + +VA+K++ ++ I+EV L++LRH N +
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
E LV EY ++ L + L+GLAY HS ++HRD+K N
Sbjct: 125 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 184
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE--YSTSID---MG 365
+L++E G +KL DFG A + P F V T ++ P+V+L E Y +D +G
Sbjct: 185 ILLSEPGLVKLGDFGSASIMA-PANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 240
Query: 366 VGCIFHEMSSGRP 378
+ CI E++ +P
Sbjct: 241 ITCI--ELAERKP 251
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
L ++G G++ V+ + +VA+K++ ++ I+EV L++LRH N +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 154 LHDIIHTEKCLTLVFEY 170
E LV EY
Sbjct: 119 YRGCYLREHTAWLVMEY 135
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V++ K + T ALK +K ++ T E+ +L L H NI+ L +I T
Sbjct: 63 RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNIIKLKEIFET 119
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++LV E + R ++ S + + Q+L +AY H I+HRDLKP+
Sbjct: 120 PTEISLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPE 177
Query: 310 NLLINE---RGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
NLL LK+ADFGL++ V KT T Y P++L G Y +DM
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG---TPGYCAPEILRGCA-YGPEVDM 233
Query: 365 -GVGCIFHEMSSG-RPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQ 422
VG I + + G P + + R I L + F I+P +
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRI----------LNCEYYF-ISPWW------- 275
Query: 423 LLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+++ +A DLV+K ++ D K+R++ A++HP+
Sbjct: 276 ----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 76 SSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT 135
S R +LS+ F +ES +LG+G + V++ K + T ALK +K ++ T
Sbjct: 45 GSNRDALSD--FFEVES-----ELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT 97
Query: 136 AIREVSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
E+ +L L H NI+ L +I T ++LV E
Sbjct: 98 ---EIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G++ V+ + +VA+K++ ++ I+EV L++LRH N +
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
E LV EY ++ L + L+GLAY HS ++HRD+K N
Sbjct: 86 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 145
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE--YSTSID---MG 365
+L++E G +KL DFG A + P F V T ++ P+V+L E Y +D +G
Sbjct: 146 ILLSEPGLVKLGDFGSASIMA-PANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 366 VGCIFHEMSSGRP 378
+ CI E++ +P
Sbjct: 202 ITCI--ELAERKP 212
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
L ++G G++ V+ + +VA+K++ ++ I+EV L++LRH N +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 154 LHDIIHTEKCLTLVFEY 170
E LV EY
Sbjct: 80 YRGCYLREHTAWLVMEY 96
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 50/301 (16%)
Query: 177 RYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 236
RY+ D I + +G + VF+ K+++ D A+K I+L + E A +REV L +
Sbjct: 2 RYLTDFEPIQCLG--RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 59
Query: 237 LRHANIVTLHDII----HTEKCLT---LVFEYLE------KDLKRYMDD-CSNILSMNNV 282
L H IV + TEK V+ Y++ ++LK +M+ C+ +V
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 283 KLFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKS---------V 332
L +F Q+ + + HS+ ++HRDLKP N+ +K+ DFGL A
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 333 PTKTF---SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDE 388
P + + +V T Y P+ + G++ YS +D+ +G I E+ L+P ST +
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMER 233
Query: 389 LRLICSI--LGPPPDELKSKLEFCITPVYPSESKL--QLLAPEQMD-SDALDLVQKFLMY 443
+R + + L PP T YP E + +L+P M+ +A+++++ +
Sbjct: 234 VRTLTDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284
Query: 444 D 444
D
Sbjct: 285 D 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
LG+G + VF+ K+++ D A+K I+L + E A +REV L +L H IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTLHD 247
KG ++ V + +R T A+K + + +P + RE S+ L+H +IV L +
Sbjct: 36 KGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE 95
Query: 248 IIHTEKCLTLVFEYLEKD------LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRI 301
++ L +VFE+++ +KR D + S ++ Q+L L YCH I
Sbjct: 96 TYSSDGMLYMVFEFMDGADLCFEIVKR--ADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 302 LHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY 358
+HRD+KP +L+ + +KL FG+A V T + P+V + Y
Sbjct: 154 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPY 212
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+D+ G G I + SG F G+ + RL I+ K ++ + P S
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGII---------KGKYKMNPRQWS 259
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ A DLV++ LM D +RI+ A+ HP+
Sbjct: 260 ----------HISESAKDLVRRMLMLDPAERITVYEALNHPW 291
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTL 154
+G+G ++ V + +R T A+K + + +P + RE S+ L+H +IV L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 155 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYA 196
+ ++ L +VFE+++ D C I+ + Y+
Sbjct: 94 LETYSSDGMLYMVFEFMDG-----ADLCFEIVKRADAGFVYS 130
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 187 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 220
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 221 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLLRELRHANIVTLHDIIH 250
GT+ V G+ +LT + VA+K + + RE+ L+ RH +I+ L+ +I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
T +V EY+ +L Y+ + M +LF Q+L + YCH ++HRDLKP+
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-QILSAVDYCHRHMVVHRDLKPE 140
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L++ K+ADFGL+ S + + + Y P+V+ G +D+ G
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 369 IFHEMSSG 376
I + + G
Sbjct: 200 ILYALLCG 207
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLLREL 146
+I Y D LG GT+ V G+ +LT + VA+K + + RE+ L+
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYL 171
RH +I+ L+ +I T +V EY+
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYV 93
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G VFK + + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 79
Query: 253 KCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILHRDL 306
+++ E+ L++ LK+ IL ++ + ++GL Y + +I+HRD+
Sbjct: 80 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV-----IKGLTYLREKHKIMHRDV 134
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM- 364
KP N+L+N RGE+KL DFG++ +NE V T Y P+ L G T YS D+
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQG-THYSVQSDIW 190
Query: 365 GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKS---KLEF 409
+G EM+ GR P I L+ I+ PP +L S LEF
Sbjct: 191 SMGLSLVEMAVGRYPRPPMAI---FELLDYIVNEPPPKLPSAVFSLEF 235
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ + K+ +LG G VFK + + ++A K I LE + IRE+ +L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 151 IVTLHDIIHTEKCLTLVFEYLE 172
IV + +++ +++ E+++
Sbjct: 69 IVGFYGAFYSDGEISICMEHMD 90
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQ 288
E +L ++ H +V LH TE L L+ ++L DL + + + +VK +L +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 138
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRP 348
L GL + HS I++RDLKP+N+L++E G +KL DFGL++ K + T+ Y
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 349 PDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSI-LGPP 399
P+V+ ++ G + EM +G F G ++ + LI LG P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 187 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 220
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 221 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 191 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 224
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 225 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 277
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTLHD 247
KG ++ V + +R T A+K + + +P + RE S+ L+H +IV L +
Sbjct: 34 KGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE 93
Query: 248 IIHTEKCLTLVFEYLEKD------LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRI 301
++ L +VFE+++ +KR D + S ++ Q+L L YCH I
Sbjct: 94 TYSSDGMLYMVFEFMDGADLCFEIVKR--ADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 302 LHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEY 358
+HRD+KP +L+ + +KL FG+A V T + P+V + Y
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPY 210
Query: 359 STSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
+D+ G G I + SG F G+ + RL I+ K ++ + P S
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGII---------KGKYKMNPRQWS 257
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ A DLV++ LM D +RI+ A+ HP+
Sbjct: 258 ----------HISESAKDLVRRMLMLDPAERITVYEALNHPW 289
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI----REVSLLRELRHANIVTL 154
+G+G ++ V + +R T A+K + + +P + RE S+ L+H +IV L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 155 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYA 196
+ ++ L +VFE+++ D C I+ + Y+
Sbjct: 92 LETYSSDGMLYMVFEFMDG-----ADLCFEIVKRADAGFVYS 128
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 229 REVSLLRELRHANIVTLHDIIHTE--KCLTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLF 285
+E+ LLR LRH N++ L D+++ E + + +V EY ++ +D + +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVT 343
QL+ GL Y HS+ I+H+D+KP NLL+ G LK++ G+A A T +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGS 174
Query: 344 LWYRPPDVLLGSTEYST-SIDM-GVGCIFHEMSSGRPLFPGSTIEDELR-------LICS 394
++PP++ G +S +D+ G + +++G F G I I
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG 234
Query: 395 ILGPP-PDELKSKLEF 409
GPP D LK LE+
Sbjct: 235 DCGPPLSDLLKGMLEY 250
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAP---CTAIREVSLLREL 146
I Y D LG+G+Y V + T A+K +K + P +E+ LLR L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 147 RHANIVTLHDIIHTE--KCLTLVFEYLEKDLKRYMDDCSNI-LSMNNVKGTYATVFKGKS 203
RH N++ L D+++ E + + +V EY ++ +D + G + + G
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 204 RLTDNLVALKEIK 216
L + K+IK
Sbjct: 124 YLHSQGIVHKDIK 136
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 307
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 357
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 358 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 71 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 124
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQ 181
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 182 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 239
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 240 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 292
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 293 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 139
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 140 YLVGDELWVVMEFLE 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 148 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 201
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIAAVCLAVLQ 258
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 259 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 316
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 317 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 369
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 370 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 216
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 217 YLVGDELWVVMEFLE 231
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 55/283 (19%)
Query: 224 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNI-LSMNNV 282
P + R V +L H H C+ VFE L ++ + + ++++
Sbjct: 73 PNSTFRCVQMLEWFEH----------HGHICI--VFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLI---------------NERG----ELKLAD 323
+ +Q+ + + + HS ++ H DLKP+N+L +ER ++K+ D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 324 FGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPG 382
FG A + + S V T YR P+V+L + +S D+ +GCI E G +FP
Sbjct: 181 FGSA---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 383 STIEDELRLICSILGPPPDELKSKL--------------EFCITPVYPSES----KLQLL 424
++ L ++ ILGP P + K E Y S + K +L
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQV 467
+ + DL+QK L YD +RI+ A++HP+F+ L +
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 28 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 81
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIAAVCLAVLQ 138
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 139 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 196
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 197 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 249
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 250 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 289
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 96
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 97 YLVGDELWVVMEFLE 111
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 26 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 79
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIAAVCLAVLQ 136
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 137 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 194
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 195 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 247
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 248 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 287
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 94
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 95 YLVGDELWVVMEFLE 109
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLLRELRHANIVTLHDIIH 250
GT+ V G+ +LT + VA+K + + RE+ L+ RH +I+ L+ +I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
T +V EY+ +L Y+ + M +LF Q+L + YCH ++HRDLKP+
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-QILSAVDYCHRHMVVHRDLKPE 140
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L++ K+ADFGL+ S + + Y P+V+ G +D+ G
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 369 IFHEMSSG 376
I + + G
Sbjct: 200 ILYALLCG 207
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--REVSLLREL 146
+I Y D LG GT+ V G+ +LT + VA+K + + RE+ L+
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 147 RHANIVTLHDIIHTEKCLTLVFEYL 171
RH +I+ L+ +I T +V EY+
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYV 93
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 23/270 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+K +++ T L A K I + EE + E+ +L H NIV L D + E
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYE 79
Query: 253 KCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
L ++ E+ + M + L+ + +++ Q L L Y H +I+HRDLK N+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 312 LINERGELKLADFGLARAKSVPTKTFSNE--VVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
L G++KLADFG++ AK+ T + + T ++ P+V++ T D
Sbjct: 140 LFTLDGDIKLADFGVS-AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV- 197
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
S G L + IE PP EL + + SE L P +
Sbjct: 198 ---WSLGITLIEMAEIE-----------PPHHELNPMR--VLLKIAKSEPP-TLAQPSRW 240
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S+ D ++K L + R + + ++HP+
Sbjct: 241 SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLH 155
N+V +
Sbjct: 66 NVVKFY 71
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+ +L++L H I+ + + E +V E +E + L KL+ +Q+
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWY 346
L + Y H I+HRDLKP+N+L++ + E +K+ DFG ++ T T Y
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTY 321
Query: 347 RPPDVL--LGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
P+VL +G+ Y+ ++D +G I SG P F + L+ D++
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK----------DQI 371
Query: 404 KSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
S I V+ ++ ALDLV+K L+ D K R + A+RHP+
Sbjct: 372 TSGKYNFIPEVWA-----------EVSEKALDLVKKLLVVDPKARFTTEEALRHPW 416
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNV 282
RE + R L+H NIV LHD I E LVF E E + R S +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADA 132
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTFSN 339
+ Q+L + + H I+HRDLKP+NLL+ + +KLADFGLA + +
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 340 EVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T Y P+VL Y +D+ G I + + G P F ED+ +L I
Sbjct: 193 FAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPFWD---EDQHKLYQQIKAG 248
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
D +PS + + PE A +L+ + L + +RI+A A++HP
Sbjct: 249 AYD-------------FPS-PEWDTVTPE-----AKNLINQMLTINPAKRITADQALKHP 289
Query: 459 Y 459
+
Sbjct: 290 W 290
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Query: 91 ESYFKLDKLGQGTYATV-----------FKGKSRLTDNLVALKEIKLEHEEGAPCTAIRE 139
+ Y ++LG+G ++ V + K T L A KLE RE
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE----------RE 80
Query: 140 VSLLRELRHANIVTLHDIIHTEKCLTLVFE 169
+ R L+H NIV LHD I E LVF+
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFD 110
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 150 NIVTLH 155
N+V +
Sbjct: 66 NVVKFY 71
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 15 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 74
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 75 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 132
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 133 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 193 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 229
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 150 NIVTLH 155
N+V +
Sbjct: 64 NVVKFY 69
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELRHANIVTLHDII-- 249
G+Y K + + ++ KE+ E + EV+LLREL+H NIV +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCS---NILSMNNVKLFLFQLLRGLAYCHSRR----- 300
T L +V EY E DL + + L V + QL L CH R
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYS 359
+LHRDLKP N+ ++ + +KL DFGLAR + + F+ E V T +Y P+ + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAKEFVGTPYYMSPEQMNRMSYNE 195
Query: 360 TSIDMGVGCIFHEMSSGRPLF 380
S +GC+ +E+ + P F
Sbjct: 196 KSDIWSLGCLLYELCALMPPF 216
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 89 RIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKL-EHEEGAPCTAIREVSLLRELR 147
R E Y L +G G+Y K + + ++ KE+ E + EV+LLREL+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 148 HANIVTLHD--IIHTEKCLTLVFEYLE 172
H NIV +D I T L +V EY E
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCE 90
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSXQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 21 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 74
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIAAVCLAVLQ 131
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 132 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 189
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 190 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 242
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 243 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 282
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 89
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 90 YLVGDELWVVMEFLE 104
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 174 DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 233
D + Y+D+ I +G+ V R + LVA+K++ L ++ EV +
Sbjct: 17 DPRSYLDNFIKI-----GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVI 70
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLR 291
+R+ +H N+V +++ L +V E+LE + D MN + +L+
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGG---ALTDIVTHTRMNEEQIAAVCLAVLQ 127
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPP 349
L+ H++ ++HRD+K ++L+ G +KL+DFG +K VP + V T ++ P
Sbjct: 128 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAP 185
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+ L+ Y +D+ +G + EM G P + +++I L P LK+
Sbjct: 186 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL---PPRLKN--- 238
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ V PS + + L+ D QR +AA ++HP+ GP
Sbjct: 239 --LHKVSPSLK---------------GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V R + LVA+K++ L ++ EV ++R+ +H N+V +++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 85
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 86 YLVGDELWVVMEFLE 100
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 185 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 218
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 219 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE--KCLTLVFEYL- 262
T VA+K +K E +E+ +LR L H NIV I + + L+ E+L
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 263 EKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
LK Y+ N +++ + Q+ +G+ Y SR+ +HRDL +N+L+ ++K+
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 323 DFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM 373
DFGL +A K T + WY P+ L+ S Y S G HE+
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHEL 222
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 77 SRRQSLSEIGFGRIESYF--KLDKLGQGTYATV----FKGKSRLTDNLVALKEIKLEHEE 130
S ++ +E+ E F ++ LG+G + V + + T VA+K +K E
Sbjct: 5 SEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG 64
Query: 131 GAPCTAIREVSLLRELRHANIVTLHDIIHTE--KCLTLVFEYL-EKDLKRYMDDCSNILS 187
+E+ +LR L H NIV I + + L+ E+L LK Y+ N ++
Sbjct: 65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN 124
Query: 188 MNNVKGTYATVFKGKSRL 205
+ + KG L
Sbjct: 125 LKQQLKYAVQICKGMDYL 142
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 209 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 242
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 243 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 295
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+S+ R L H ++V H + +V E + + L+ + +L Q+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+ G Y H R++HRDLK NL +NE E+K+ DFGLA + T Y P
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+V L +S +D+ +GCI + + G+P F S
Sbjct: 211 EV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------------------- 244
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P+ ++ A L+QK L D R + + +F S
Sbjct: 245 -CLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE--KCLTLVFEYL- 262
T VA+K +K E +E+ +LR L H NIV I + + L+ E+L
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 263 EKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
LK Y+ N +++ + Q+ +G+ Y SR+ +HRDL +N+L+ ++K+
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 323 DFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM 373
DFGL +A K T + WY P+ L+ S Y S G HE+
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHEL 210
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 95 KLDKLGQGTYATV----FKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
++ LG+G + V + + T VA+K +K E +E+ +LR L H N
Sbjct: 13 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 72
Query: 151 IVTLHDIIHTE--KCLTLVFEYL-EKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRL 205
IV I + + L+ E+L LK Y+ N +++ + KG L
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ V + T+ L A+K +K + ++ CT + + L + + LH
Sbjct: 29 KGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSC 88
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY+ DL ++ V + ++ GL + H R I++RDLK
Sbjct: 89 FQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV-FYAAEISIGLFFLHKRGIIYRDLK 147
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGV 366
N++++ G +K+ADFG+ + + T T Y P++ + Y S+D
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI-IAYQPYGKSVDWWAY 206
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
G + +EM +G+P F G EDE L SI+
Sbjct: 207 GVLLYEMLAGQPPFDG---EDEDELFQSIM 233
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 73 LTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLE---HE 129
+ R+Q + + ++ + L LG+G++ V + T+ L A+K +K + +
Sbjct: 1 MPSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 60
Query: 130 EGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 171
+ CT + + L + + LH T L V EY+
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYV 102
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQ 288
E +L E+ H IV LH TE L L+ ++L DL + + + +VK +L +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRP 348
L L + HS I++RDLKP+N+L++E G +KL DFGL++ K + T+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 349 PDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSI-LGPP 399
P+V+ ++ G + EM +G F G ++ + +I LG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQ 288
E +L E+ H IV LH TE L L+ ++L DL + + + +VK +L +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 135
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRP 348
L L + HS I++RDLKP+N+L++E G +KL DFGL++ K + T+ Y
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 349 PDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSI-LGPP 399
P+V+ ++ G + EM +G F G ++ + +I LG P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQ 288
E +L E+ H IV LH TE L L+ ++L DL + + + +VK +L +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRP 348
L L + HS I++RDLKP+N+L++E G +KL DFGL++ K + T+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 349 PDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSI-LGPP 399
P+V+ ++ G + EM +G F G ++ + +I LG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G Y V +R+T+ VA+K + ++ P +E+ + L H N+V +
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRRE 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 195 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 231
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G Y V +R+T+ VA+K + ++ P +E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 150 NIVTLH 155
N+V +
Sbjct: 66 NVVKFY 71
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 35/278 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G+ V + + + VA+K + L ++ EV ++R+ +H N+V ++
Sbjct: 55 EGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL-FNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L ++ E+L+ D S + L+ + +L+ LAY H++ ++HRD+K +
Sbjct: 114 GEELWVLMEFLQGG--ALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVG 367
+L+ G +KL+DFG +K VP + V T ++ P+V+ S Y+T +D+ +G
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSL-YATEVDIWSLG 228
Query: 368 CIFHEMSSGR-PLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
+ EM G P F S ++ RL S PPP K K ++PV
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPP---KLKNSHKVSPVLR---------- 272
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLG 464
D +++ L+ D ++R +A + HP+ G
Sbjct: 273 --------DFLERMLVRDPQERATAQELLDHPFLLQTG 302
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V + + + VA+K + L ++ EV ++R+ +H N+V ++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL-FNEVVIMRDYQHFNVVEMYKS 110
Query: 158 IHTEKCLTLVFEYLE 172
+ L ++ E+L+
Sbjct: 111 YLVGEELWVLMEFLQ 125
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 56/270 (20%)
Query: 227 AIREVSLLREL-RHANIVTLH--------DIIHTEKCLTLVFEYLE-KDLKRYMDDCSNI 276
A REV LLRE H N++ I E C + EY+E KD
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAH-------- 115
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI---NERGELK--LADFGLARAKS 331
L + + L L Q GLA+ HS I+HRDLKP N+LI N G++K ++DFGL + +
Sbjct: 116 LGLEPITL-LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174
Query: 332 VPTKTFSNEV----VTLWYRPPDVLLGSTEYST-SIDM-GVGCIFHE-MSSGRPLFPGST 384
V +FS W P + E T ++D+ GC+F+ +S G F G +
Sbjct: 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKS 233
Query: 385 IEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM-DSDALDLVQKFLMY 443
++ + + +LG L L PE+ D A +L++K +
Sbjct: 234 LQRQANI---LLGA--------------------CSLDCLHPEKHEDVIARELIEKMIAM 270
Query: 444 DAKQRISAANAMRHPYFNSLGPQVHELSDT 473
D ++R SA + ++HP+F SL Q+ D
Sbjct: 271 DPQKRPSAKHVLKHPFFWSLEKQLQFFQDV 300
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 55/283 (19%)
Query: 224 PCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNI-LSMNNV 282
P + R V +L H H C+ VFE L ++ + + ++++
Sbjct: 73 PNSTFRCVQMLEWFEH----------HGHICI--VFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 283 KLFLFQLLRGLAYCHSRRILHRDLKPQNLLI---------------NERG----ELKLAD 323
+ +Q+ + + + HS ++ H DLKP+N+L +ER ++K+ D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 324 FGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPG 382
FG A + + S V YR P+V+L + +S D+ +GCI E G +FP
Sbjct: 181 FGSA---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 383 STIEDELRLICSILGPPPDELKSKL--------------EFCITPVYPSES----KLQLL 424
++ L ++ ILGP P + K E Y S + K +L
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 425 APEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQV 467
+ + DL+QK L YD +RI+ A++HP+F+ L +
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 29/219 (13%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G V K + R + ++A K I LE + IRE+ +L E IV + +++
Sbjct: 27 GNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 86
Query: 253 KCLTLVFEYLE--------KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR-RILH 303
+++ E+++ K+ KR ++ +S+ +LRGLAY + +I+H
Sbjct: 87 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI--------AVLRGLAYLREKHQIMH 138
Query: 304 RDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSI 362
RD+KP N+L+N RGE+KL DFG++ + +N V T Y P+ L G T YS
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMAPERLQG-THYSVQS 194
Query: 363 DM-GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPP 399
D+ +G E++ GR P+ P E E +I G P
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKELE-----AIFGRP 228
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 70 DAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHE 129
+A LT+ ++ L + F RI +LG G V K + R + ++A K I LE +
Sbjct: 1 EAFLTQKAKVGELKDDDFERI------SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK 54
Query: 130 EGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE--------KDLKRYMDD 181
IRE+ +L E IV + +++ +++ E+++ K+ KR ++
Sbjct: 55 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE 114
Query: 182 CSNILSMNNVKG 193
+S+ ++G
Sbjct: 115 ILGKVSIAVLRG 126
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + + + ++ LVA+K I E E RE+ R LRH NIV ++I T
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V EY +R + + S + + F QL+ G++YCH+ ++ HRDLK +N
Sbjct: 88 THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 311 LLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
L++ LK+ DFG +++ + ++ S V T Y P+VLL
Sbjct: 146 TLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G + + + ++ LVA+K I E E RE+ R LRH N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHPN 76
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV ++I T L +V EY
Sbjct: 77 IVRFKEVILTPTHLAIVMEY 96
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCS--NILSMNNVKLF 285
E+ +L+ L H NI+ + ++ + +V E E L+R + + LS V
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINE---RGELKLADFGLARAKSVPTKTFSNEVV 342
+ Q++ LAY HS+ ++H+DLKP+N+L + +K+ DFGLA + +N
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAG 188
Query: 343 TLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE 402
T Y P+V + I G + + + +G F G+++E E
Sbjct: 189 TALYMAPEVFKRDVTFKCDI-WSAGVVMYFLLTGCLPFTGTSLE---------------E 232
Query: 403 LKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF 460
++ K + P Y E + L P+ A+DL+++ L D ++R SAA + H +F
Sbjct: 233 VQQKATYK-EPNYAVECR--PLTPQ-----AVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ V + + TD L A+K +K + ++ CT + + L + + LH
Sbjct: 30 KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC 89
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY+ DL ++ + V + ++ GL + S+ I++RDLK
Sbjct: 90 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLK 148
Query: 308 PQNLLINERGELKLADFGLARAK---SVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID- 363
N++++ G +K+ADFG+ + V TK F T Y P++ + Y S+D
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEI-IAYQPYGKSVDW 204
Query: 364 MGVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
G + +EM +G+ F G EDE L SI+
Sbjct: 205 WAFGVLLYEMLAGQAPFEG---EDEDELFQSIM 234
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G++ V + + TD L A+K +K + ++ CT + + L + + LH
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 156 DIIHTEKCLTLVFEYL 171
T L V EY+
Sbjct: 88 SCFQTMDRLYFVMEYV 103
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 185 ILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIV 243
+LS G++ TV+KGK VA+K +K+ A R EV++LR+ RH NI+
Sbjct: 39 MLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 244 TLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLL-------RGLAYC 296
+ T+ L +V ++ E L + K +FQL+ +G+ Y
Sbjct: 96 LFMGYM-TKDNLAIVTQWCEGS------SLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-L 352
H++ I+HRD+K N+ ++E +K+ DFGLA KS + + E T LW P + +
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 353 LGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSI 395
+ +S D+ G + +E+ +G P S I + ++I +
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMV 250
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K +K+ A R EV++LR+ RH NI+
Sbjct: 43 RIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 157 IIHTEKCLTLVFEYLE 172
+ T+ L +V ++ E
Sbjct: 100 YM-TKDNLAIVTQWCE 114
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIK----LEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KG++ V + + + A+K ++ L+ +E + R V LL+ ++H +V LH
Sbjct: 48 KGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVGLHF 106
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V +Y+ Y + + ++ L Y HS I++RDLK
Sbjct: 107 SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG-V 366
P+N+L++ +G + L DFGL + T S T Y P+V L Y ++D +
Sbjct: 167 PENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQPYDRTVDWWCL 225
Query: 367 GCIFHEMSSGRPLF 380
G + +EM G P F
Sbjct: 226 GAVLYEMLYGLPPF 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 70/290 (24%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFE-----YLEKDLKRYMDDCSNILSMNNVKL 284
EV L+++L H NI L+++ E+ + LV E +L L ++DD + +M+ VK
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 285 -----------------------------------FLFQLLRGLAYCHSRRILHRDLKPQ 309
+ Q+ L Y H++ I HRD+KP+
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 310 NLLI--NERGELKLADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTE-YSTSI 362
N L N+ E+KL DFGL++ + + + T ++ P+VL + E Y
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 363 D-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL 421
D G + H + G FPG D + + L KL F P Y S L
Sbjct: 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQV----------LNKKLCF-ENPNYNVLSPL 306
Query: 422 QLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQVHELS 471
A DL+ L + +R A A++HP+ + +++++S
Sbjct: 307 -----------ARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYKMS 345
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG++ V+KG T +VA+K I LE E +E+++L + I
Sbjct: 29 KGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLK 88
Query: 252 EKCLTLVFEYLEK----DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
L ++ EYL DL + L + L ++L+GL Y HS R +HRD+K
Sbjct: 89 STKLWIIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKTFSNEVVT--LWYRPPDVLLGSTEYSTSI-DM 364
N+L++E+G++KLADFG+A + T+ N V W P + + ++ I +
Sbjct: 144 AANVLLSEQGDVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 365 GVGCIFHEMSSGRP 378
G+ I E++ G P
Sbjct: 203 GITAI--ELAKGEP 214
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E + KLD++G+G++ V+KG T +VA+K I LE E +E+++L +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
I L ++ EYL
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYL 99
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLHDI 248
KG++ V + + TD L A+K +K + ++ CT + + L + + LH
Sbjct: 351 KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC 410
Query: 249 IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T L V EY+ DL ++ + V + ++ GL + S+ I++RDLK
Sbjct: 411 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLK 469
Query: 308 PQNLLINERGELKLADFGLARAK---SVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID- 363
N++++ G +K+ADFG+ + V TK F T Y P++ + Y S+D
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEI-IAYQPYGKSVDW 525
Query: 364 MGVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
G + +EM +G+ F G EDE L SI+
Sbjct: 526 WAFGVLLYEMLAGQAPFEG---EDEDELFQSIM 555
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVSLLRELRHANIVTLH 155
LG+G++ V + + TD L A+K +K + ++ CT + + L + + LH
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 156 DIIHTEKCLTLVFEYL 171
T L V EY+
Sbjct: 409 SCFQTMDRLYFVMEYV 424
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 33/278 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G TV+ T VA++++ L+ + I E+ ++RE ++ NIV D
Sbjct: 30 QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIVNYLDSYLV 88
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V EYL + D M+ + + L+ L + HS +++HRD+K
Sbjct: 89 GDELWVVMEYLAGG---SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYSTSIDM-GVG 367
N+L+ G +KL DFG A+ P ++ +E+V T ++ P+V+ Y +D+ +G
Sbjct: 146 NILLGMDGSVKLTDFGFC-AQITPEQSKRSEMVGTPYWMAPEVVT-RKAYGPKVDIWSLG 203
Query: 368 CIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPE 427
+ EM G P + E+ LR + I EL++ PE
Sbjct: 204 IMAIEMIEGEPPYLN---ENPLRALYLIATNGTPELQN--------------------PE 240
Query: 428 QMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
++ + D + + L D ++R SA ++H + P
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
Y + +K+GQG TV+ T VA++++ L+ + I E+ ++RE ++ NIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIV 80
Query: 153 TLHDIIHTEKCLTLVFEYL 171
D L +V EYL
Sbjct: 81 NYLDSYLVGDELWVVMEYL 99
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 30/275 (10%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G V +R+T+ VA+K + ++ P +E+ + + L H N+V +
Sbjct: 16 EGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L EY R D + + + F QL+ G+ Y H I HRD+KP+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 310 NLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
NLL++ER LK++DFGLA + + TL Y P++L ++ +D+
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + M +G P P D + ++ E K L
Sbjct: 194 GIVLTAMLAGE--LPWDQ--------------PSDSCQEYSDW-------KEKKTYLNPW 230
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+++DS L L+ K L+ + RI+ + + ++N
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 90 IESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 149
+E + + LG+G V +R+T+ VA+K + ++ P +E+ + + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 150 NIVTLH 155
N+V +
Sbjct: 65 NVVKFY 70
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + + + ++ LVA+K I E E RE+ R LRH NIV ++I T
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 86
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V EY +R + + S + + F QL+ G++YCH+ ++ HRDLK +N
Sbjct: 87 THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 144
Query: 311 LLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
L++ LK+ DFG +++ + ++ S V T Y P+VLL
Sbjct: 145 TLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 188
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G + + + ++ LVA+K I E E RE+ R LRH N
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPN 75
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV ++I T L +V EY
Sbjct: 76 IVRFKEVILTPTHLAIVMEY 95
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KGT+ V K + T A+K +K E + + E +L+ RH + L
Sbjct: 161 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF 220
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR-ILHRDLKP 308
T L V EY + + S + + + +++ L Y HS + +++RDLK
Sbjct: 221 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 280
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGVG 367
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+G
Sbjct: 281 ENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLG 339
Query: 368 CIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPE 427
+ +EM GR F E LI L ++ F P
Sbjct: 340 VVMYEMMCGRLPFYNQDHEKLFELI----------LMEEIRF----------------PR 373
Query: 428 QMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
+ +A L+ L D KQR+ A M+H +F +
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 414
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 22/172 (12%)
Query: 1 MEQLSVVHENPKIGSEEELEEVQDNLSKPVEVVKVRQRPKRSSEDINKRLSLPADLHLPE 60
++ +V+ + + EE EE + + +K K+ E+++ R P+D E
Sbjct: 81 LQWTTVIERTFHVETPEEREEWTTAIQTVADGLK-----KQEEEEMDFRSGSPSDNSGAE 135
Query: 61 SFLAKTNIIDAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVA 120
++ L + R +++E Y KL LG+GT+ V K + T A
Sbjct: 136 E-------MEVSLAKPKHRVTMNEF------EYLKL--LGKGTFGKVILVKEKATGRYYA 180
Query: 121 LKEIKLE--HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
+K +K E + + E +L+ RH + L T L V EY
Sbjct: 181 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 232
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KGT+ V K + T A+K +K E + + E +L+ RH + L
Sbjct: 158 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF 217
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR-ILHRDLKP 308
T L V EY + + S + + + +++ L Y HS + +++RDLK
Sbjct: 218 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 277
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MGVG 367
+NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G+G
Sbjct: 278 ENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLG 336
Query: 368 CIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPE 427
+ +EM GR F E LI L ++ F P
Sbjct: 337 VVMYEMMCGRLPFYNQDHEKLFELI----------LMEEIRF----------------PR 370
Query: 428 QMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
+ +A L+ L D KQR+ A M+H +F +
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 1 MEQLSVVHENPKIGSEEELEEVQDNLSKPVEVVKVRQRPKRSSEDINKRLSLPADLHLPE 60
++ +V+ + + EE EE + + +K K+++ +++ R P+D E
Sbjct: 78 LQWTTVIERTFHVETPEEREEWTTAIQTVADGLK-----KQAAAEMDFRSGSPSDNSGAE 132
Query: 61 SFLAKTNIIDAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKGKSRLTDNLVA 120
++ L + R +++E Y KL LG+GT+ V K + T A
Sbjct: 133 E-------MEVSLAKPKHRVTMNEF------EYLKL--LGKGTFGKVILVKEKATGRYYA 177
Query: 121 LKEIKLE--HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY 170
+K +K E + + E +L+ RH + L T L V EY
Sbjct: 178 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 35 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 94
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 95 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 152
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 209
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 210 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 246
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 38 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 97
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 98 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 155
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 156 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 212
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 213 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 249
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 250 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 279
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 141
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 142 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 199
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 200 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 257 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 293
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFL 286
LLR +H NI+TL D+ K + +V E L+K L++ S L
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ------KFFSEREASAVL 122
Query: 287 FQLLRGLAYCHSRRILHRDLKPQNLL-INERGE---LKLADFGLARAKSVPTKTFSNEVV 342
F + + + Y H++ ++HRDLKP N+L ++E G +++ DFG A+
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP--P 399
T + P+VL Y + D+ +G + + M +G F GP
Sbjct: 183 TANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFAN--------------GPDDT 227
Query: 400 PDELKSKL---EFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMR 456
P+E+ +++ +F ++ Y + + A DLV K L D QR++AA +R
Sbjct: 228 PEEILARIGSGKFSLSGGYWNS----------VSDTAKDLVSKMLHVDPHQRLTAALVLR 277
Query: 457 HPYF 460
HP+
Sbjct: 278 HPWI 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 54 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 113
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 114 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 171
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 229 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 265
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 192 KGTYATVFKGKSRLTDNL-VALKEIKLEHEEG-AP----CTAIREVSLLRELR----HAN 241
KG + TVF G RLTD L VA+K I G +P T EV+LL ++ H
Sbjct: 41 KGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG 99
Query: 242 IVTLHDIIHTEKCLTLVFE--YLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
++ L D T++ LV E +DL Y+ + L + F Q++ + +CHSR
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 300 RILHRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVL----- 352
++HRD+K +N+LI+ RG KL DFG A P F V Y PP+ +
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV---YSPPEWISRHQY 215
Query: 353 --LGSTEYSTSI---DMGVGCIF----HEMSSGRPLFPGSTIEDELRLICSILGPPPDEL 403
L +T +S I DM G I E+ FP D LI L P P
Sbjct: 216 HALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSR 275
Query: 404 KSKLEFCITP 413
S E + P
Sbjct: 276 PSLEEILLDP 285
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 90 IESYFKLDKL-GQGTYATVFKGKSRLTDNL-VALKEIKLEHEEG-AP----CTAIREVSL 142
E+ ++L L G+G + TVF G RLTD L VA+K I G +P T EV+L
Sbjct: 29 FEAEYRLGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 143 LREL----RHANIVTLHDIIHTEKCLTLVFE 169
L ++ H ++ L D T++ LV E
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 35/279 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G+ V + T VA+K++ L ++ EV ++R+ H N+V ++
Sbjct: 55 EGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYHHDNVVDMYSSYLV 113
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V E+LE + D MN + +LR L+Y H++ ++HRD+K
Sbjct: 114 GDELWVVMEFLEGGA---LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
++L+ G +KL+DFG +K VP + V T ++ P+V + Y T +D+ +
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEV-ISRLPYGTEVDIWSL 227
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G + EM G P + PP + ++ + P K+ +
Sbjct: 228 GIMVIEMIDGEPPY---------------FNEPPLQAMRRIRDSLPPRVKDLHKVSSVL- 271
Query: 427 EQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
LDL+ L+ + QR +A + HP+ GP
Sbjct: 272 ----RGFLDLM---LVREPSQRATAQELLGHPFLKLAGP 303
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
K+G+G+ V + T VA+K++ L ++ EV ++R+ H N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYHHDNVVDMYSS 110
Query: 158 IHTEKCLTLVFEYLE 172
L +V E+LE
Sbjct: 111 YLVGDELWVVMEFLE 125
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 141
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 142 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 199
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 200 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 257 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 293
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 24 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 139
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 200 FGIVLYELMTGQ--LPYSNINNRDQII 224
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 20 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 77 -YSTKPQLAIVTQWCE 91
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 24 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 139
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 200 FGIVLYELMTGQ--LPYSNINNRDQII 224
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 20 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 77 -YSTKPQLAIVTQWCE 91
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 40/283 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V K + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 20 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--HTLTENRVLQNSRHPFLTALKY 77
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR-ILHRDL 306
T L V EY + + S + + + +++ L Y HS + +++RDL
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL 137
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MG 365
K +NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G
Sbjct: 138 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWG 196
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLA 425
+G + +EM GR F E LI L ++ F
Sbjct: 197 LGVVMYEMMCGRLPFYNQDHEKLFELI----------LMEEIRF---------------- 230
Query: 426 PEQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
P + +A L+ L D KQR+ A M+H +F +
Sbjct: 231 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 40/283 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V K + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 18 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--HTLTENRVLQNSRHPFLTALKY 75
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR-ILHRDL 306
T L V EY + + S + + + +++ L Y HS + +++RDL
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL 135
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MG 365
K +NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G
Sbjct: 136 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWG 194
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLA 425
+G + +EM GR F E LI L ++ F
Sbjct: 195 LGVVMYEMMCGRLPFYNQDHEKLFELI----------LMEEIRF---------------- 228
Query: 426 PEQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
P + +A L+ L D KQR+ A M+H +F +
Sbjct: 229 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 271
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 21 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 136
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 137 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 196
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 197 FGIVLYELMTGQ--LPYSNINNRDQII 221
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 17 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 74 -YSTKPQLAIVTQWCE 88
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 40/283 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVALK----EIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
KGT+ V K + T A+K E+ + +E A + E +L+ RH + L
Sbjct: 19 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--HTLTENRVLQNSRHPFLTALKY 76
Query: 248 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR-ILHRDL 306
T L V EY + + S + + + +++ L Y HS + +++RDL
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDL 136
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MG 365
K +NL++++ G +K+ DFGL + T T Y P+V L +Y ++D G
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYGRAVDWWG 195
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLA 425
+G + +EM GR F E LI L ++ F
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHEKLFELI----------LMEEIRF---------------- 229
Query: 426 PEQMDSDALDLVQKFLMYDAKQRIS-----AANAMRHPYFNSL 463
P + +A L+ L D KQR+ A M+H +F +
Sbjct: 230 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 34 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 93
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 94 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 151
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 152 IANQMQPDTTSVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 208
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 209 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 245
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 246 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 19 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 195 FGIVLYELMTGQ--LPYSNINNRDQII 219
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 15 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 72 -YSTKPQLAIVTQWCE 86
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG + K R T ++ +KE+ + +E T ++EV ++R L H N++ +++
Sbjct: 20 KGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK 78
Query: 252 EKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+K L + EY++ L+ + + + F + G+AY HS I+HRDL N
Sbjct: 79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHN 138
Query: 311 LLINERGELKLADFGLAR 328
L+ E + +ADFGLAR
Sbjct: 139 CLVRENKNVVVADFGLAR 156
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
LG+G + K R T ++ +KE+ + +E T ++EV ++R L H N++ ++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 159 HTEKCLTLVFEYLE 172
+ +K L + EY++
Sbjct: 77 YKDKRLNFITEYIK 90
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + + + + LVA+K I E E RE+ R LRH NIV ++I T
Sbjct: 30 GNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V EY +R + + S + + F QL+ G++Y H+ ++ HRDLK +N
Sbjct: 88 THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLEN 145
Query: 311 LLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
L++ LK+ADFG ++A + ++ S V T Y P+VLL EY + C
Sbjct: 146 TLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPAYIAPEVLL-KKEYDGKVADVWSC 203
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G + + + + LVA+K I E E RE+ R LRH N
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHPN 76
Query: 151 IVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDN 208
IV ++I T L +V EY +R + + S + + + + G S
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 209 LVALKEIKLEHE--EGAPCTAIR 229
VA +++KLE+ +G+P ++
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLK 157
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 46 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 161
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 162 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 221
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 222 FGIVLYELMTGQ--LPYSNINNRDQII 246
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 42 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 99 -YSTKPQLAIVTQWCE 113
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 47 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 162
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 163 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 223 FGIVLYELMTGQ--LPYSNINNRDQII 247
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 43 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 100 -YSTKPQLAIVTQWCE 114
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 69/256 (26%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFE----------------YLEKDLKRYMDD 272
+E+ +++ L H NI+ L++ + LV E + E D R M D
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 114
Query: 273 CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI---NERGELKLADFGLARA 329
+L +AYCH + HRDLKP+N L + LKL DFGLA A
Sbjct: 115 ----------------VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-A 157
Query: 330 KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDEL 389
+ P K +V T +Y P VL G Y D E S+G ++
Sbjct: 158 RFKPGKMMRTKVGTPYYVSPQVLEGL--YGPECD--------EWSAGVMMY--------- 198
Query: 390 RLICSILGPPPDELKSKLEFCI-----TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYD 444
L+C G PP + E + T +P + L ++P+ A L+++ L
Sbjct: 199 VLLC---GYPPFSAPTDXEVMLKIREGTFTFPEKDWLN-VSPQ-----AESLIRRLLTKS 249
Query: 445 AKQRISAANAMRHPYF 460
KQRI++ A+ H +F
Sbjct: 250 PKQRITSLQALEHEWF 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 69/256 (26%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFE----------------YLEKDLKRYMDD 272
+E+ +++ L H NI+ L++ + LV E + E D R M D
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 131
Query: 273 CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI---NERGELKLADFGLARA 329
+L +AYCH + HRDLKP+N L + LKL DFGLA A
Sbjct: 132 ----------------VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-A 174
Query: 330 KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDEL 389
+ P K +V T +Y P VL G Y D E S+G ++
Sbjct: 175 RFKPGKMMRTKVGTPYYVSPQVLEGL--YGPECD--------EWSAGVMMY--------- 215
Query: 390 RLICSILGPPPDELKSKLEFCI-----TPVYPSESKLQLLAPEQMDSDALDLVQKFLMYD 444
L+C G PP + E + T +P + L ++P+ A L+++ L
Sbjct: 216 VLLC---GYPPFSAPTDXEVMLKIREGTFTFPEKDWLN-VSPQ-----AESLIRRLLTKS 266
Query: 445 AKQRISAANAMRHPYF 460
KQRI++ A+ H +F
Sbjct: 267 PKQRITSLQALEHEWF 282
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 19 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 135 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 195 FGIVLYELMTGQ--LPYSNINNRDQII 219
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 15 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 72 -YSTKPQLAIVTQWCE 86
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 32/257 (12%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLF 287
+E+S+L RH NI+ LH+ + + L ++FE++ D+ ++ + L+ + ++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINER--GELKLADFGLARAKSVPTKTFSNEVVTLW 345
Q+ L + HS I H D++P+N++ R +K+ +FG AR P F
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFRLLFTAPE 168
Query: 346 YRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELK 404
Y P+V ST+ DM +G + + + SG + P E
Sbjct: 169 YYAPEVHQHDV-VSTATDMWSLGTLVYVLLSG-------------------INPFLAETN 208
Query: 405 SKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLG 464
++ I + +E A +++ +A+D V + L+ + K R++A+ A++HP+
Sbjct: 209 QQI---IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL---- 261
Query: 465 PQVHELSDTQSIFSLPH 481
Q E T+ I +L H
Sbjct: 262 KQKIERVSTKVIRTLKH 278
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
E Y + LG+G + V + + K +K++ + +E+S+L RH N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK--KEISILNIARHRN 62
Query: 151 IVTLHDIIHTEKCLTLVFEYL 171
I+ LH+ + + L ++FE++
Sbjct: 63 ILHLHESFESMEELVMIFEFI 83
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 19 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 195 FGIVLYELMTGQ--LPYSNINNRDQII 219
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 15 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 157 IIHTEKCLTLVFEYLE 172
T L +V ++ E
Sbjct: 72 -YSTAPQLAIVTQWCE 86
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G TV+ T VA++++ L+ + I E+ ++RE ++ NIV D
Sbjct: 30 QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIVNYLDSYLV 88
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V EYL + D M+ + + L+ L + HS +++HRD+K
Sbjct: 89 GDELWVVMEYLAGG---SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L+ G +KL DFG + S V T ++ P+V+ Y +D+ +G
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YGPKVDIWSLGI 204
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ EM G P + E+ LR + I EL++ PE+
Sbjct: 205 MAIEMIEGEPPYLN---ENPLRALYLIATNGTPELQN--------------------PEK 241
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ + D + + L D ++R SA ++H + P
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
Y + +K+GQG TV+ T VA++++ L+ + I E+ ++RE ++ NIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIV 80
Query: 153 TLHDIIHTEKCLTLVFEYL 171
D L +V EYL
Sbjct: 81 NYLDSYLVGDELWVVMEYL 99
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G TV+ T VA++++ L+ + I E+ ++RE ++ NIV D
Sbjct: 30 QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIVNYLDSYLV 88
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V EYL + D M+ + + L+ L + HS +++HRD+K
Sbjct: 89 GDELWVVMEYLAGG---SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L+ G +KL DFG + S V T ++ P+V+ Y +D+ +G
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGI 204
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ EM G P + E+ LR + I EL++ PE+
Sbjct: 205 MAIEMIEGEPPYLN---ENPLRALYLIATNGTPELQN--------------------PEK 241
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ + D + + L D ++R SA ++H + P
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
Y + +K+GQG TV+ T VA++++ L+ + I E+ ++RE ++ NIV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIV 80
Query: 153 TLHDIIHTEKCLTLVFEYL 171
D L +V EYL
Sbjct: 81 NYLDSYLVGDELWVVMEYL 99
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 39 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 154
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 155 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 214
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 215 FGIVLYELMTGQ--LPYSNINNRDQII 239
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 35 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 92 -YSTKPQLAIVTQWCE 106
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G TV+ T VA++++ L+ + I E+ ++RE ++ NIV D
Sbjct: 31 QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIVNYLDSYLV 89
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V EYL + D M+ + + L+ L + HS +++HRD+K
Sbjct: 90 GDELWVVMEYLAGG---SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 146
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L+ G +KL DFG + S V T ++ P+V+ Y +D+ +G
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YGPKVDIWSLGI 205
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ EM G P + E+ LR + I EL++ PE+
Sbjct: 206 MAIEMIEGEPPYLN---ENPLRALYLIATNGTPELQN--------------------PEK 242
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ + D + + L D ++R SA ++H + P
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
Y + +K+GQG TV+ T VA++++ L+ + I E+ ++RE ++ NIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIV 81
Query: 153 TLHDIIHTEKCLTLVFEYL 171
D L +V EYL
Sbjct: 82 NYLDSYLVGDELWVVMEYL 100
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHDIIHT 251
G++ TV+KGK VA+K + + A + EV +LR+ RH NI+ T
Sbjct: 47 GSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 252 EKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ L +V ++ E L ++ M + Q +G+ Y H++ I+HRDLK N
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 162
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSNEVVT---LWYRPPDV-LLGSTEYSTSIDM-G 365
+ ++E +K+ DFGLA KS + + E ++ LW P + + YS D+
Sbjct: 163 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 366 VGCIFHEMSSGRPLFPGSTIEDELRLI 392
G + +E+ +G+ P S I + ++I
Sbjct: 223 FGIVLYELMTGQ--LPYSNINNRDQII 247
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIR-EVSLLRELRHANIVTLHD 156
++G G++ TV+KGK VA+K + + A + EV +LR+ RH NI+
Sbjct: 43 RIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 157 IIHTEKCLTLVFEYLE 172
T+ L +V ++ E
Sbjct: 100 -YSTKPQLAIVTQWCE 114
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDII-- 249
GTY V+KG+ T L A+K + + +E +E+++L++ H NI T +
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK--QEINMLKKYSHHRNIATYYGAFIK 92
Query: 250 ----HTEKCLTLVFEYLEK----DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRI 301
+ L LV E+ DL + + N L + ++LRGL++ H ++
Sbjct: 93 KNPPGMDDQLWLVMEFCGAGSVTDLIK--NTKGNTLKEEWIAYICREILRGLSHLHQHKV 150
Query: 302 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTS 361
+HRD+K QN+L+ E E+KL DFG++ + + T ++ P+V+ +
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 362 IDM-----GVGCIFHEMSSGRP 378
D +G EM+ G P
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAP 232
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 73 LTRSSRRQSLSEIGFGRIE---SYFKLDKL-GQGTYATVFKGKSRLTDNLVALKEIKLEH 128
+ S +SL EI + F+L +L G GTY V+KG+ T L A+K + +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG 61
Query: 129 EEGAPCTAIREVSLLREL-RHANIVTLH 155
+E +E+++L++ H NI T +
Sbjct: 62 DEEEEIK--QEINMLKKYSHHRNIATYY 87
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 141
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 142 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 199
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A T + ++V + Y PP+ + + S+S + G +GCI
Sbjct: 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 257 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 293
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 186 LSMNNV-------KGTYATVFKGKSRLTDNLVALK-----EIKLEHEEGAPCTAIREVSL 233
L+MN+ +G + V+ + T + A+K IK++ E +SL
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ IV + HT L+ + + + Y + S +++ + +++ GL
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLA--RAKSVPTKTFSNEVVTLWYRPPDV 351
+ H+R +++RDLKP N+L++E G ++++D GLA +K P + V T Y P+V
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 360
Query: 352 LLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDEL---RLICSILGPPPD----EL 403
L Y +S D +GC+ ++ G F +D+ R+ ++ PD EL
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 420
Query: 404 KSKLE 408
+S LE
Sbjct: 421 RSLLE 425
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 186 LSMNNV-------KGTYATVFKGKSRLTDNLVALK-----EIKLEHEEGAPCTAIREVSL 233
L+MN+ +G + V+ + T + A+K IK++ E +SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ IV + HT L+ + + + Y + S +++ + +++ GL
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLA--RAKSVPTKTFSNEVVTLWYRPPDV 351
+ H+R +++RDLKP N+L++E G ++++D GLA +K P + V T Y P+V
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 352 LLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDEL---RLICSILGPPPD----EL 403
L Y +S D +GC+ ++ G F +D+ R+ ++ PD EL
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 404 KSKLE 408
+S LE
Sbjct: 422 RSLLE 426
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 186 LSMNNV-------KGTYATVFKGKSRLTDNLVALK-----EIKLEHEEGAPCTAIREVSL 233
L+MN+ +G + V+ + T + A+K IK++ E +SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ IV + HT L+ + + + Y + S +++ + +++ GL
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLA--RAKSVPTKTFSNEVVTLWYRPPDV 351
+ H+R +++RDLKP N+L++E G ++++D GLA +K P + V T Y P+V
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 352 LLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDEL---RLICSILGPPPD----EL 403
L Y +S D +GC+ ++ G F +D+ R+ ++ PD EL
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 404 KSKLE 408
+S LE
Sbjct: 422 RSLLE 426
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 186 LSMNNV-------KGTYATVFKGKSRLTDNLVALK-----EIKLEHEEGAPCTAIREVSL 233
L+MN+ +G + V+ + T + A+K IK++ E +SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ IV + HT L+ + + + Y + S +++ + +++ GL
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLA--RAKSVPTKTFSNEVVTLWYRPPDV 351
+ H+R +++RDLKP N+L++E G ++++D GLA +K P + V T Y P+V
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 352 LLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDEL---RLICSILGPPPD----EL 403
L Y +S D +GC+ ++ G F +D+ R+ ++ PD EL
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 404 KSKLE 408
+S LE
Sbjct: 422 RSLLE 426
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+++ + L + ++V H + + +V E + + ++ + F+ Q
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
++G+ Y H+ R++HRDLK NL +N+ ++K+ DFGLA + + T Y P
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+VL +S +D+ +GCI + + G+P F S
Sbjct: 196 EVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETS------------------------- 229
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P ++ A L+++ L D R S A + +F S
Sbjct: 230 -CLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH-- 250
G + VFK K R+ +K +K +E+ A REV L +L H NIV +
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNEK-----AEREVKALAKLDHVNIVHYNGCWDGF 76
Query: 251 --------------TEKCLTLVFEYLEKDL------KRYMDDCSNILSMNNVKLFLF-QL 289
KCL + E+ +K KR + +L++ LF Q+
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE-----LFEQI 131
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
+G+ Y HS+++++RDLKP N+ + + ++K+ DFGL + K ++ TL Y P
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-GTLRYMSP 190
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEM 373
+ + S +Y +D+ +G I E+
Sbjct: 191 E-QISSQDYGKEVDLYALGLILAEL 214
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+G G + VFK K R+ +K +K +E+ A REV L +L H NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK-----AEREVKALAKLDHVNIV 67
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFL 286
LLR +H NI+TL D+ K + +V E L+K L++ S L
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ------KFFSEREASAVL 122
Query: 287 FQLLRGLAYCHSRRILHRDLKPQNLL-INERGE---LKLADFGLARAKSVPTKTFSNEVV 342
F + + + Y H++ ++HRDLKP N+L ++E G +++ DFG A+
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP--P 399
T + P+VL Y + D+ +G + + +G F GP
Sbjct: 183 TANFVAPEVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFAN--------------GPDDT 227
Query: 400 PDELKSKL---EFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMR 456
P+E+ +++ +F ++ Y + + A DLV K L D QR++AA +R
Sbjct: 228 PEEILARIGSGKFSLSGGYWNS----------VSDTAKDLVSKXLHVDPHQRLTAALVLR 277
Query: 457 HPYF 460
HP+
Sbjct: 278 HPWI 281
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELR-HANIVTLHDIIH 250
+G+++ K + ++ A+K I E +E++ L+ H NIV LH++ H
Sbjct: 21 EGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ----KEITALKLCEGHPNIVKLHEVFH 76
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ LV E L S + +L+ +++ H ++HRDLKP+N
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 311 LLI---NERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
LL N+ E+K+ DFG AR K + TL Y P+ LL Y S D+ +
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSL 195
Query: 367 GCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAP 426
G I + M SG+ F + L C+ S +E + + + + A
Sbjct: 196 GVILYTMLSGQVPFQSH----DRSLTCT----------SAVEI-MKKIKKGDFSFEGEAW 240
Query: 427 EQMDSDALDLVQKFLMYDAKQRI 449
+ + +A DL+Q L D +R+
Sbjct: 241 KNVSQEAKDLIQGLLTVDPNKRL 263
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELR-HANIVTLHDI 157
LG+G+++ K + ++ A+K I E +E++ L+ H NIV LH++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ----KEITALKLCEGHPNIVKLHEV 74
Query: 158 IHTEKCLTLVFEYL 171
H + LV E L
Sbjct: 75 FHDQLHTFLVMELL 88
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+++ + L + ++V H + + +V E + + ++ + F+ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
++G+ Y H+ R++HRDLK NL +N+ ++K+ DFGLA + + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+VL +S +D+ +GCI + + G+P F S
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETS------------------------- 245
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P ++ A L+++ L D R S A + +F S
Sbjct: 246 -CLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G TV+ T VA++++ L+ + I E+ ++RE ++ NIV D
Sbjct: 31 QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIVNYLDSYLV 89
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMN--NVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
L +V EYL + D M+ + + L+ L + HS +++HR++K
Sbjct: 90 GDELWVVMEYLAGG---SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSD 146
Query: 310 NLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
N+L+ G +KL DFG + S V T ++ P+V+ Y +D+ +G
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGI 205
Query: 369 IFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQ 428
+ EM G P + E+ LR + I EL++ PE+
Sbjct: 206 MAIEMIEGEPPYLN---ENPLRALYLIATNGTPELQN--------------------PEK 242
Query: 429 MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGP 465
+ + D + + L D ++R SA ++H + P
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 93 YFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
Y + +K+GQG TV+ T VA++++ L+ + I E+ ++RE ++ NIV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNIV 81
Query: 153 TLHDIIHTEKCLTLVFEYL 171
D L +V EYL
Sbjct: 82 NYLDSYLVGDELWVVMEYL 100
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + + + ++ LVA+K I E E RE+ R LRH NIV ++I T
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V EY +R + + S + + F QL+ G++YCH+ ++ HRDLK +N
Sbjct: 88 THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 311 LLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
L++ LK+ FG +++ + ++ S V T Y P+VLL
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G + + + ++ LVA+K I E E RE+ R LRH N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPN 76
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV ++I T L +V EY
Sbjct: 77 IVRFKEVILTPTHLAIVMEY 96
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDII 249
+G + VF + + T L A K++ + + A+ E +L ++ IV+L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 250 HTEKCLTLVFEYLEKDLKRY----MDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T+ L LV + RY +D+ + + Q++ GL + H R I++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 306 LKPQNLLINERGELKLADFGLA---RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP+N+L+++ G ++++D GLA +A TK ++ T + P++LLG EY S+
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---TPGFMAPELLLGE-EYDFSV 370
Query: 363 D-MGVGCIFHEMSSGRPLF 380
D +G +EM + R F
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 196
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 WAFGVLLWEIATYGMSPYPG 216
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 75
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECN 105
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDII 249
+G + VF + + T L A K++ + + A+ E +L ++ IV+L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 250 HTEKCLTLVFEYLEKDLKRY----MDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T+ L LV + RY +D+ + + Q++ GL + H R I++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 306 LKPQNLLINERGELKLADFGLA---RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP+N+L+++ G ++++D GLA +A TK ++ T + P++LLG EY S+
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---TPGFMAPELLLGE-EYDFSV 370
Query: 363 D-MGVGCIFHEMSSGRPLF 380
D +G +EM + R F
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + + + ++ LVA+K I E E RE+ R LRH NIV ++I T
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
L +V EY +R + + S + + F QL+ G++YCH+ ++ HRDLK +N
Sbjct: 88 THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 311 LLIN--ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLL 353
L++ LK+ FG +++ SV + V T Y P+VLL
Sbjct: 146 TLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPAYIAPEVLL 189
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G + + + ++ LVA+K I E E RE+ R LRH N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPN 76
Query: 151 IVTLHDIIHTEKCLTLVFEY 170
IV ++I T L +V EY
Sbjct: 77 IVRFKEVILTPTHLAIVMEY 96
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDII 249
+G + VF + + T L A K++ + + A+ E +L ++ IV+L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 250 HTEKCLTLVFEYLEKDLKRY----MDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T+ L LV + RY +D+ + + Q++ GL + H R I++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 306 LKPQNLLINERGELKLADFGLA---RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP+N+L+++ G ++++D GLA +A TK ++ T + P++LLG EY S+
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---TPGFMAPELLLGE-EYDFSV 370
Query: 363 D-MGVGCIFHEMSSGRPLF 380
D +G +EM + R F
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 47/270 (17%)
Query: 209 LVALKEIKLEHEEGAPCTAIR-EVSLLRELR-HAN-IVTLHDIIHTEKCLTLVFEYLEKD 265
+ A+K + LE + + R E++ L +L+ H++ I+ L+D T++ + +V E D
Sbjct: 54 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID 113
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ +I K + +L + H I+H DLKP N LI + G LKL DFG
Sbjct: 114 LNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG 171
Query: 326 LARAKSVPTKTF--SNEVVTLWYRPPDVLLGSTEYSTSIDMG--------------VGCI 369
+A ++V T+ Y PP+ + + S+S + G +GCI
Sbjct: 172 IANQMQPDXXXVVKDSQVGTVNYMPPEAI---KDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 370 FHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQM 429
+ M+ G+ P I +++ + +I+ P ++EF P+
Sbjct: 229 LYYMTYGKT--PFQQIINQISKLHAIIDP-----NHEIEF----------------PDIP 265
Query: 430 DSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ D D+++ L D KQRIS + HPY
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+++ + L + ++V H + + +V E + + ++ + F+ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
++G+ Y H+ R++HRDLK NL +N+ ++K+ DFGLA + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+VL +S +D+ +GCI + + G+P F S
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETS------------------------- 245
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P ++ A L+++ L D R S A + +F S
Sbjct: 246 -CLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDII 249
+G + VF + + T L A K++ + + A+ E +L ++ IV+L
Sbjct: 195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF 254
Query: 250 HTEKCLTLVFEYLEKDLKRY----MDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
T+ L LV + RY +D+ + + Q++ GL + H R I++RD
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD 314
Query: 306 LKPQNLLINERGELKLADFGLA---RAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
LKP+N+L+++ G ++++D GLA +A TK ++ T + P++LLG EY S+
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---TPGFMAPELLLGE-EYDFSV 370
Query: 363 D-MGVGCIFHEMSSGRPLF 380
D +G +EM + R F
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 51/219 (23%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV--------- 243
G + VFK K R+ ++ +K +E+ A REV L +L H NIV
Sbjct: 23 GGFGQVFKAKHRIDGKTYVIRRVKYNNEK-----AEREVKALAKLDHVNIVHYNGCWDGF 77
Query: 244 -----TLHDIIHTE---------------KCLTLVFEYLEKDL------KRYMDDCSNIL 277
T D + + KCL + E+ +K KR + +L
Sbjct: 78 DYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 137
Query: 278 SMNNVKLFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA-KSVPTK 335
++ LF Q+ +G+ Y HS++++HRDLKP N+ + + ++K+ DFGL + K+ +
Sbjct: 138 ALE-----LFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 336 TFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
T S TL Y P+ + S +Y +D+ +G I E+
Sbjct: 193 TRSKG--TLRYMSPE-QISSQDYGKEVDLYALGLILAEL 228
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+G G + VFK K R+ ++ +K +E+ A REV L +L H NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK-----AEREVKALAKLDHVNIV 68
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 53/264 (20%)
Query: 227 AIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKL- 284
A+ E+ LL E H N++ + T++ L + E +L+ ++ S +S N+KL
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 130
Query: 285 -------FLFQLLRGLAYCHSRRILHRDLKPQNLLIN-------------ERGELKLADF 324
L Q+ G+A+ HS +I+HRDLKPQN+L++ E + ++DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 325 GLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTE--YSTSIDM-GVGCIFHE-MSSG 376
GL + F +N T +R P++L ST+ + SID+ +GC+F+ +S G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 377 RPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDL 436
+ F G E +I I S +++ L + ++A DL
Sbjct: 251 KHPF-GDKYSRESNIIRGIF--------------------SLDEMKCLHDRSLIAEATDL 289
Query: 437 VQKFLMYDAKQRISAANAMRHPYF 460
+ + + +D +R +A +RHP F
Sbjct: 290 ISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 200
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 201 WAFGVLLWEIATYGMSPYPG 220
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 79
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLRECN 109
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V+ G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 97
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E +V EY+ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLA 157
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT-FSNEVVTLWYRPPDVLLGSTEYSTSIDMGV 366
+N L+ E +K+ADFGL+R + T T + + + P+ L +T S
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 367 GCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 218 GVLLWEIATYGMSPYPG 234
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V+ G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 93
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E +V EY+ +L Y+ +C+
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECN 123
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 53/264 (20%)
Query: 227 AIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKL- 284
A+ E+ LL E H N++ + T++ L + E +L+ ++ S +S N+KL
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 130
Query: 285 -------FLFQLLRGLAYCHSRRILHRDLKPQNLLIN-------------ERGELKLADF 324
L Q+ G+A+ HS +I+HRDLKPQN+L++ E + ++DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 325 GLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTE--YSTSIDM-GVGCIFHE-MSSG 376
GL + F +N T +R P++L ST+ + SID+ +GC+F+ +S G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 377 RPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDL 436
+ F G E +I I S +++ L + ++A DL
Sbjct: 251 KHPF-GDKYSRESNIIRGIF--------------------SLDEMKCLHDRSLIAEATDL 289
Query: 437 VQKFLMYDAKQRISAANAMRHPYF 460
+ + + +D +R +A +RHP F
Sbjct: 290 ISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL 289
E+++ + L + ++V H + + +V E + + ++ + F+ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 290 LRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPP 349
++G+ Y H+ R++HRDLK NL +N+ ++K+ DFGLA + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
Query: 350 DVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
+VL +S +D+ +GCI + + G+P F S
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETS------------------------- 245
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
C+ Y K + P ++ A L+++ L D R S A + +F S
Sbjct: 246 -CLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 50/301 (16%)
Query: 183 SNILSMNNV-------KGTYATVFKGKSRLTDNLVALKEIKLE---HEEGAPCTAIREVS 232
SN L ++N KG++ V + + T +L A+K +K + ++ CT +
Sbjct: 17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI 76
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRG 292
L H + L T L V E++ + S + + +++
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 293 LAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR---AKSVPTKTFSNEVVTLWYRPP 349
L + H + I++RDLK N+L++ G KLADFG+ + V T TF T Y P
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG---TPDYIAP 193
Query: 350 DVLLGSTEYSTSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
++ L Y ++D +G + +EM G F E+E L +IL DE+
Sbjct: 194 EI-LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA---ENEDDLFEAILN---DEV----- 241
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANA------MRHPYFNS 462
VYP+ + DA +++ F+ + R+ + +RHP+F
Sbjct: 242 -----VYPT----------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
Query: 463 L 463
+
Sbjct: 287 I 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G++ TV + + +D VA+K I +E + A +REV++++ LRH NIV +
Sbjct: 48 GSFGTVHRAEWHGSD--VAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLF--LFQLLRGLAYCHSRR--ILHRD 305
L++V EYL + L R + ++ + + + +G+ Y H+R I+HRD
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRD 164
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
LK NLL++++ +K+ DFGL+R K+ T + P+VL S
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 366 VGCIFHEMSS 375
G I E+++
Sbjct: 225 FGVILWELAT 234
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTL 154
+K+G G++ TV + + +D VA+K I +E + A +REV++++ LRH NIV
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD--VAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 155 HDIIHTEKCLTLVFEYLEK 173
+ L++V EYL +
Sbjct: 100 MGAVTQPPNLSIVTEYLSR 118
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 40 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 96
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 157 RLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES--LAYNKFSIKSDV 196
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 WAFGVLLWEIATYGMSPYPG 216
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 75
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECN 105
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 200
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 201 WAFGVLLWEIATYGMSPYPG 220
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 79
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECN 109
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V K K R D VA+K+I+ E E A +R++S + H NIV L+
Sbjct: 19 RGAFGVVCKAKWRAKD--VAIKQIESESERKAFIVELRQLS---RVNHPNIVKLYGACLN 73
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNI--LSMNNVKLFLFQLLRGLAYCHS---RRILHRD 305
CL V EY E L + + + + + Q +G+AY HS + ++HRD
Sbjct: 74 PVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 306 LKPQNLLINERGE-LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
LKP NLL+ G LK+ DFG A + T +N+ W P+V GS YS D+
Sbjct: 132 LKPPNLLLVAGGTVLKICDFG--TACDIQTHMTNNKGSAAWMA-PEVFEGSN-YSEKCDV 187
Query: 365 -GVGCIFHEMSSGRPLF 380
G I E+ + R F
Sbjct: 188 FSWGIILWEVITRRKPF 204
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
+G+G + V K K R D VA+K+I+ E E A +R++S + H NIV L+
Sbjct: 17 VGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFIVELRQLS---RVNHPNIVKLYGAC 71
Query: 159 HTEKCLTLVFEYLE 172
C LV EY E
Sbjct: 72 LNPVC--LVMEYAE 83
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 200
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 201 WAFGVLLWEIATYGMSPYPG 220
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 79
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+ G VA+K +K +P + E +L+++L+H +V L+ ++ T+
Sbjct: 30 GQFGEVWMGYYN-GHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQ 85
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ + ++ EY+E L ++ S I L++N + Q+ G+A+ R +HRDL+ N
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
+L+++ K+ADFGLAR + T + W P + G+ + + G
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGI 204
Query: 369 IFHEM-SSGRPLFPGST 384
+ E+ + GR +PG T
Sbjct: 205 LLTEIVTHGRIPYPGMT 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 48 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 104
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 105 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 165 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V K K R D VA+K+I+ E E A +R++S + H NIV L+
Sbjct: 18 RGAFGVVCKAKWRAKD--VAIKQIESESERKAFIVELRQLS---RVNHPNIVKLYGACLN 72
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNI--LSMNNVKLFLFQLLRGLAYCHS---RRILHRD 305
CL V EY E L + + + + + Q +G+AY HS + ++HRD
Sbjct: 73 PVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 306 LKPQNLLINERGE-LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
LKP NLL+ G LK+ DFG A + T +N+ W P+V GS YS D+
Sbjct: 131 LKPPNLLLVAGGTVLKICDFG--TACDIQTHMTNNKGSAAWMA-PEVFEGSN-YSEKCDV 186
Query: 365 -GVGCIFHEMSSGRPLF 380
G I E+ + R F
Sbjct: 187 FSWGIILWEVITRRKPF 203
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
+G+G + V K K R D VA+K+I+ E E A +R++S + H NIV L+
Sbjct: 16 VGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFIVELRQLS---RVNHPNIVKLYGAC 70
Query: 159 HTEKCLTLVFEYLE 172
C LV EY E
Sbjct: 71 LNPVC--LVMEYAE 82
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G++ TV + + +D VA+K I +E + A +REV++++ LRH NIV +
Sbjct: 48 GSFGTVHRAEWHGSD--VAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 251 TEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLF--LFQLLRGLAYCHSRR--ILHRD 305
L++V EYL + L R + ++ + + + +G+ Y H+R I+HR+
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRN 164
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
LK NLL++++ +K+ DFGL+R K+ + + T + P+VL S
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 366 VGCIFHEMSS 375
G I E+++
Sbjct: 225 FGVILWELAT 234
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTL 154
+K+G G++ TV + + +D VA+K I +E + A +REV++++ LRH NIV
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD--VAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 155 HDIIHTEKCLTLVFEYLEK 173
+ L++V EYL +
Sbjct: 100 MGAVTQPPNLSIVTEYLSR 118
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES--LAYNKFSIKSDV 197
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 198 WAFGVLLWEIATYGMSPYPG 217
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 76
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECN 106
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 197
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 198 WAFGVLLWEIATYGMSPYPG 217
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 76
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECN 106
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+ G VA+K +K +P + E +L+++L+H +V L+ ++ T+
Sbjct: 24 GQFGEVWMGYYN-GHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQ 79
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ + ++ EY+E L ++ S I L++N + Q+ G+A+ R +HRDL+ N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
+L+++ K+ADFGLAR + T + W P + G+ + + G
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGI 198
Query: 369 IFHEM-SSGRPLFPGST 384
+ E+ + GR +PG T
Sbjct: 199 LLTEIVTHGRIPYPGMT 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 194
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 195 AFGVLLWEIATYGMSPYPG 213
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 72
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECN 102
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 82
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 199
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 200 WAFGVLLWEIATYGMSPYPG 219
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 78
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECN 108
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 91
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 208
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 209 WAFGVLLWEIATYGMSPYPG 228
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 87
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLDYLRECN 117
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+ G VA+K +K +P + E +L+++L+H +V L+ ++ T+
Sbjct: 33 GQFGEVWMGYYN-GHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQ 88
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ + ++ EY+E L ++ S I L++N + Q+ G+A+ R +HRDL+ N
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 148
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
+L+++ K+ADFGLAR + T + W P + G+ + + G
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGI 207
Query: 369 IFHEM-SSGRPLFPGST 384
+ E+ + GR +PG T
Sbjct: 208 LLTEIVTHGRIPYPGMT 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLF 285
+ E +L++ L+H +V L+ ++ E+ + ++ EY+ K L D + + + F
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVT 343
Q+ G+AY + +HRDL+ N+L++E K+ADFGLAR + T +
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 344 LWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGSTIEDELRLICSILGPP--- 399
W P + G + + G + +E+ + G+ +PG T D + + P
Sbjct: 176 KWTAPEAINFGCFTIKSDV-WSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVE 234
Query: 400 --PDELKSKLEFC 410
PDEL ++ C
Sbjct: 235 NCPDELYDIMKMC 247
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA-----IREVSLLRELRHAN 150
+ +LG G + V+ G VA+K +K P T + E +L++ L+H
Sbjct: 18 VKRLGAGQFGEVWMGYYN-NSTKVAVKTLK-------PGTMSVQAFLEEANLMKTLQHDK 69
Query: 151 IVTLHDIIHTEKCLTLVFEYLEK 173
+V L+ ++ E+ + ++ EY+ K
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAK 92
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 200
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 201 WAFGVLLWEIATYGMSPYPG 220
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 79
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 197
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 198 WAFGVLLWEIATYGMSPYPG 217
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 76
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECN 106
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 42 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 98
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 99 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 158
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 159 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 195
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 196 WAFGVLLWEIATYGMSPYPG 215
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECN 104
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 41 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 97
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 98 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 157
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 158 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 196
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 AFGVLLWEIATYGMSPYPG 215
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 196
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 AFGVLLWEIATYGMSPYPG 215
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 195
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 196 WAFGVLLWEIATYGMSPYPG 215
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 172 EKDLKRYMDDCSNILSMNNVK-------GTYATVFKGKSRLTDNLVALK------EIKLE 218
E LK++ + N ++ + G++ V K T N A+K +KL+
Sbjct: 24 EDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNIL 277
E + E +L+ + +V L L +V EY+ D+ ++
Sbjct: 84 QIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR-F 138
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + + + Q++ Y HS +++RDLKP+NLLI+++G +K+ADFG AK V +T+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF--AKRVKGRTW 196
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 X-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 40/299 (13%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEG-APCTAIREVSLLRELR-HANIVTLHDII 249
+G YA V S A+K I E + G + REV L + + + NI+ L +
Sbjct: 23 EGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ LVFE L+ + + + L + H++ I HRDLKP+
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPE 140
Query: 310 NLLIN---ERGELKLADFGLARAKS-------VPTKTFSNEVVTLWYRPPDVLLGSTEYS 359
N+L + +K+ DF L + T + + Y P+V+ T+ +
Sbjct: 141 NILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQA 200
Query: 360 TSID-----MGVGCIFHEMSSGRPLFPGSTIED---ELRLICSILGPPPDELKSKLEFCI 411
T D +G + + M SG P F G D + +C + C
Sbjct: 201 TFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV--------------CQ 246
Query: 412 TPVYPSESKLQLLAPEQ----MDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSLGPQ 466
++ S + + P++ + S+A DL+ K L+ DAKQR+SAA ++HP+ P+
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 172 EKDLKRYMDDCSNILSMNNVK-------GTYATVFKGKSRLTDNLVALK------EIKLE 218
E LK++ + N ++ + G++ V K T N A+K +KL+
Sbjct: 24 EDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNIL 277
E + E +L+ + +V L L +V EY+ D+ ++
Sbjct: 84 QIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR-F 138
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + + + Q++ Y HS +++RDLKP+NLLI+++G +K+ADFG AK V +T+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF--AKRVKGRTW 196
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 X-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+ G VA+K +K +P + E +L+++L+H +V L+ ++ T+
Sbjct: 34 GQFGEVWMGYYN-GHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQ 89
Query: 253 KCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ + ++ EY+E L ++ S I L++N + Q+ G+A+ R +HRDL+ N
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 149
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
+L+++ K+ADFGLAR + T + W P + G+ + + G
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGI 208
Query: 369 IFHEM-SSGRPLFPGST 384
+ E+ + GR +PG T
Sbjct: 209 LLTEIVTHGRIPYPGMT 225
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 40 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 96
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 157 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 215
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 57/268 (21%)
Query: 227 AIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKL- 284
A+ E+ LL E H N++ + T++ L + E +L+ ++ S +S N+KL
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 112
Query: 285 -------FLFQLLRGLAYCHSRRILHRDLKPQNLLIN-------------ERGELKLADF 324
L Q+ G+A+ HS +I+HRDLKPQN+L++ E + ++DF
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 325 GLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTEYST------SIDM-GVGCIFHE- 372
GL + +F +N T +R P++L S T SID+ +GC+F+
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 373 MSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQMDSD 432
+S G+ F G E +I I S +++ L + ++
Sbjct: 233 LSKGKHPF-GDKYSRESNIIRGIF--------------------SLDEMKCLHDRSLIAE 271
Query: 433 ALDLVQKFLMYDAKQRISAANAMRHPYF 460
A DL+ + + +D +R +A +RHP F
Sbjct: 272 ATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 45 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 101
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 102 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 162 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 46 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 102
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 163 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 35 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 91
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 92 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 151
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 152 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFL 286
LLR +H NI+TL D+ K + LV E L+K L++ S L
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ------KFFSEREASFVL 127
Query: 287 FQLLRGLAYCHSRRILHRDLKPQNLL-INERGE---LKLADFGLARAKSVPTKTFSNEVV 342
+ + + Y HS+ ++HRDLKP N+L ++E G L++ DFG A+
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP-- 399
T + P+VL Y D+ +G + + M +G F GP
Sbjct: 188 TANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------------GPSDT 232
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
P+E+ +T + + L + A DLV K L D QR++A ++HP+
Sbjct: 233 PEEI-------LTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 40 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 96
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HRDL+ N+L+++ K+ADFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLF 285
+ E +L++ L+H +V L+ ++ E+ + ++ E++ K L D + + + F
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVT 343
Q+ G+AY + +HRDL+ N+L++E K+ADFGLAR + T +
Sbjct: 115 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 344 LWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGSTIEDELRLICSILGPP--- 399
W P + G +++ G + +E+ + G+ +PG T D + + P
Sbjct: 175 KWTAPEAINFGCFTIKSNV-WSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRME 233
Query: 400 --PDELKSKLEFC 410
PDEL ++ C
Sbjct: 234 NCPDELYDIMKMC 246
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 132
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV---TLWYRPPDVLL 353
H I+HRD+KP N+LI+ +K+ DFG+ARA + + T Y P+
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 201
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 202 AFGVLLWEIATYGMSPYPG 220
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 79
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECN 109
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 30/244 (12%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEH--EEGAPCTAIREVSLLRELRHANIVTLHDII 249
KG++ V + T + A+K + + E +E+ +++ L H +V L
Sbjct: 25 KGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF 84
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V + L RY + VKLF+ +L+ L Y ++RI+HRD+KP
Sbjct: 85 QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPD 144
Query: 310 NLLINERGELKLADFGLARAKSVPTKT-FSNEVVTLWYRPPDVLLG--STEYSTSID-MG 365
N+L++E G + + DF +A +P +T + T Y P++ YS ++D
Sbjct: 145 NILLDEHGHVHITDFNIAAM--LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWS 202
Query: 366 VGCIFHEMSSGR----------------------PLFPGSTIEDELRLICSILGPPPDEL 403
+G +E+ GR +P + ++ + L+ +L P PD+
Sbjct: 203 LGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
Query: 404 KSKL 407
S+L
Sbjct: 263 FSQL 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 233 LLRELRHANIVTLHDIIHTEKCLTLVFEY------LEKDLKRYMDDCSNILSMNNVKLFL 286
LLR +H NI+TL D+ K + LV E L+K L++ S L
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ------KFFSEREASFVL 127
Query: 287 FQLLRGLAYCHSRRILHRDLKPQNLL-INERGE---LKLADFGLARAKSVPTKTFSNEVV 342
+ + + Y HS+ ++HRDLKP N+L ++E G L++ DFG A+
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 343 TLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPP-- 399
T + P+VL Y D+ +G + + M +G F GP
Sbjct: 188 TANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------------GPSDT 232
Query: 400 PDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
P+E+ +T + + L + A DLV K L D QR++A ++HP+
Sbjct: 233 PEEI-------LTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 31/214 (14%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN 150
+ Y + +G G+Y+ + + T+ A+K I + + I LLR +H N
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPN 82
Query: 151 IVTLHDIIHTEKCLTLVF------EYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSR 204
I+TL D+ K + LV E L+K L++ S T+ K
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQ------KFFSEREASFVLHTIGKTVEY 136
Query: 205 LTDNLVALKEIKLEH-----EEGAP-CTAIREVSLLRELRHANIVTLHDIIHTEKCLTLV 258
L V +++K + E G P C I + ++LR N + + C T
Sbjct: 137 LHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM------TPCYTAN 190
Query: 259 FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRG 292
F E ++ D+ +I S+ + L+ +L G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLG---ILLYTMLAG 221
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +K+ADFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 196
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 AFGVLLWEIATYGMSPYPG 215
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECN 104
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 196
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 197 AFGVLLWEIATYGMSPYPG 215
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 74
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECN 104
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 97 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 321 LADFGLARAKSVPTKTFS----NEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + + F E WY P L +++S + D+ G + +E+
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 210
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 73
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYL 95
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +K+ADFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 132
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVV-TLWYRPPDVLL 353
H I+HRD+KP N++I+ +K+ DFG+AR A S + T + V+ T Y P+
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 132
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVV-TLWYRPPDVLL 353
H I+HRD+KP N++I+ +K+ DFG+AR A S + T + V+ T Y P+
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 57/268 (21%)
Query: 227 AIREVSLLRELR-HANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKL- 284
A+ E+ LL E H N++ + T++ L + E +L+ ++ S +S N+KL
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNVSDENLKLQ 112
Query: 285 -------FLFQLLRGLAYCHSRRILHRDLKPQNLLIN-------------ERGELKLADF 324
L Q+ G+A+ HS +I+HRDLKPQN+L++ E + ++DF
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 325 GLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTEYST------SIDM-GVGCIFHE- 372
GL + F +N T +R P++L S T SID+ +GC+F+
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 373 MSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKLQLLAPEQMDSD 432
+S G+ F G E +I I S +++ L + ++
Sbjct: 233 LSKGKHPF-GDKYSRESNIIRGIF--------------------SLDEMKCLHDRSLIAE 271
Query: 433 ALDLVQKFLMYDAKQRISAANAMRHPYF 460
A DL+ + + +D +R +A +RHP F
Sbjct: 272 ATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 132
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVV-TLWYRPPDVLL 353
H I+HRD+KP N++I+ +K+ DFG+AR A S + T + V+ T Y P+
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 132
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVV-TLWYRPPDVLL 353
H I+HRD+KP N++I+ +K+ DFG+AR A S + T + V+ T Y P+
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V + + T VA+K+ + E E+ ++++L H N+V+ ++
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 85
Query: 253 KCLT------LVFEYLEK-DLKRYMDDCSNILSMNN--VKLFLFQLLRGLAYCHSRRILH 303
+ L L EY E DL++Y++ N + ++ L + L Y H RI+H
Sbjct: 86 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 145
Query: 304 RDLKPQNLLIN---ERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYS 359
RDLKP+N+++ +R K+ D G AK + E V TL Y P+ LL +Y+
Sbjct: 146 RDLKPENIVLQPGPQRLIHKIIDLGY--AKELDQGELCTEFVGTLQYLAPE-LLEQKKYT 202
Query: 360 TSID-MGVGCIFHEMSSG-RPLFP 381
++D G + E +G RP P
Sbjct: 203 VTVDYWSFGTLAFECITGFRPFLP 226
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
++LG G + V + + T VA+K+ + E E+ ++++L H N+V+ +
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 157 IIHTEKCLT------LVFEYLE-KDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNL 209
+ + L L EY E DL++Y++ N + +G T+ S ++ L
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--EGPIRTLL---SDISSAL 135
Query: 210 VALKEIKLEHEEGAP 224
L E ++ H + P
Sbjct: 136 RYLHENRIIHRDLKP 150
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 194
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 195 AFGVLLWEIATYGMSPYPG 213
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 72
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECN 102
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V + + T VA+K+ + E E+ ++++L H N+V+ ++
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 84
Query: 253 KCLT------LVFEYLEK-DLKRYMDDCSNILSMNN--VKLFLFQLLRGLAYCHSRRILH 303
+ L L EY E DL++Y++ N + ++ L + L Y H RI+H
Sbjct: 85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 144
Query: 304 RDLKPQNLLIN---ERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGSTEYS 359
RDLKP+N+++ +R K+ D G AK + E V TL Y P+ LL +Y+
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGY--AKELDQGELCTEFVGTLQYLAPE-LLEQKKYT 201
Query: 360 TSID-MGVGCIFHEMSSG-RPLFP 381
++D G + E +G RP P
Sbjct: 202 VTVDYWSFGTLAFECITGFRPFLP 225
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
++LG G + V + + T VA+K+ + E E+ ++++L H N+V+ +
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 157 IIHTEKCLT------LVFEYLE-KDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNL 209
+ + L L EY E DL++Y++ N + +G T+ S ++ L
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--EGPIRTLL---SDISSAL 134
Query: 210 VALKEIKLEHEEGAP 224
L E ++ H + P
Sbjct: 135 RYLHENRIIHRDLKP 149
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + VF G+ R + LVA+K + ++E +L++ H NIV L +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
++ + +V E ++ D ++ L + + + G+ Y S+ +HRDL +N
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSN---EVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
L+ E+ LK++DFG++R ++ S +V W P + G YS+ D+
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG--RYSSESDVWSF 301
Query: 367 GCIFHE-MSSGRPLFPGST-------IEDELRLICSILGP 398
G + E S G +P + +E RL C L P
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
+++G+G + VF G+ R + LVA+K + ++E +L++ H NIV L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 157 IIHTEKCLTLVFEYLE 172
+ ++ + +V E ++
Sbjct: 180 VCTQKQPIYIVMELVQ 195
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 237 LRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYC 296
+ + + VTL DI+HTE +T ++ ++ D C + L +
Sbjct: 112 MEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADAC-----------------QALNFS 149
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVV-TLWYRPPDVLL 353
H I+HRD+KP N++I+ +K+ DFG+AR A S + T + V+ T Y P+
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLFPGST 384
G + + S +GC+ +E+ +G P F G +
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 100 YGSLRDYLQ--AHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 213
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 76
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYL 98
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 324
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HR+L
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 441
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 442 WAFGVLLWEIATYGMSPYPG 461
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 320
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECN 350
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + VF G+ R + LVA+K + ++E +L++ H NIV L +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 252 EKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
++ + +V E ++ D ++ L + + + G+ Y S+ +HRDL +N
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 311 LLINERGELKLADFGLARAKSVPTKTFSN---EVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
L+ E+ LK++DFG++R ++ S +V W P + G YS+ D+
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG--RYSSESDVWSF 301
Query: 367 GCIFHE-MSSGRPLFPGST-------IEDELRLICSILGP 398
G + E S G +P + +E RL C L P
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
+++G+G + VF G+ R + LVA+K + ++E +L++ H NIV L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 157 IIHTEKCLTLVFEYLE 172
+ ++ + +V E ++
Sbjct: 180 VCTQKQPIYIVMELVQ 195
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 18 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 133
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 134 NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 192
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 193 ILLTELTTKGRVPYPG 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 282
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDL 306
E ++ E++ +L Y+ +C N +N V L Q+ + Y + +HR+L
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 307 KPQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDV 399
Query: 365 -GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 400 WAFGVLLWEIATYGMSPYPG 419
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 278
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLRECN 308
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HRDL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 194
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 195 AFGVLLWEIATYGMSPYPG 213
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G + V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 72
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECN 102
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 192 KGTYATVFKGKS-----RLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 246
+G + VF+ ++ +VA+K +K E RE +L+ E + NIV L
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116
Query: 247 DIIHTEKCLTLVFEYLE-KDLKRYMDDCS--NILSMNNVKL------------------- 284
+ K + L+FEY+ DL ++ S + S+++ L
Sbjct: 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ 176
Query: 285 --FLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPTKTFSNE 340
Q+ G+AY R+ +HRDL +N L+ E +K+ADFGL+R + K N+
Sbjct: 177 LCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGND 236
Query: 341 VVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSS 375
+ + + PP+ + Y+T D+ G + E+ S
Sbjct: 237 AIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 99 LGQGTYATVFKGKS-----RLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVT 153
+G+G + VF+ ++ +VA+K +K E RE +L+ E + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 154 LHDIIHTEKCLTLVFEYLE-KDLKRYM 179
L + K + L+FEY+ DL ++
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 46/225 (20%)
Query: 279 MNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL-INERGEL------------------ 319
++ V+ FQL + + + H ++ H DLKP+N+L +N EL
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAV 195
Query: 320 KLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRP 378
++ DFG A + + S V T YR P+V+L +S D+ +GCI E G
Sbjct: 196 RVVDFGSA---TFDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFT 251
Query: 379 LFPGSTIEDELRLICSILGPPP--------------------DELKSKLEFCITPVYPSE 418
LF + L ++ ILGP P DE S + P
Sbjct: 252 LFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLR 311
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNSL 463
L A E DL++ L Y+ +R++ A++HP+F L
Sbjct: 312 RYLTSEAEEH--HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG A+ T T
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT 218
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 219 LCG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 35 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 208
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 209 VLMWEIYS 216
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 81 SLSEIGFGRIESYFK----LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT- 135
S + +G+G E K L +LG G + V GK R + VA+K IK EG+
Sbjct: 10 STAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSED 64
Query: 136 -AIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 171
I E ++ L H +V L+ + ++ + ++ EY+
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 36 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 95 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 152
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 208
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 71
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYL 93
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 97 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 210
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 73
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYL 95
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 97 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 210
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 73
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYL 95
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 69 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 128 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 185
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 241
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 104
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYL 126
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFGL AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGL--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 37 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 96 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 153
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 209
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 72
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYL 94
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 30/194 (15%)
Query: 292 GLAYCHSRRILHRDLKPQNLLI---NERGELKLADFGLARA-------KSVPTKTFSNEV 341
L + H++ I HRDLKP+N+L N+ +K+ DFGL + T
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 342 VTLWYRPPDVLLGSTEYSTSID-----MGVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ Y P+V+ +E ++ D +G I + + SG P F G D C
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-----CGW- 236
Query: 397 GPPPDELKSKLEFCITPVYPSESKLQLLAPEQ----MDSDALDLVQKFLMYDAKQRISAA 452
+ C ++ S + + P++ + A DL+ K L+ DAKQR+SAA
Sbjct: 237 -----DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 453 NAMRHPYFNSLGPQ 466
++HP+ P+
Sbjct: 292 QVLQHPWVQGCAPE 305
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 45 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 104 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 161
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 217
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 80
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYL 102
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 100 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 213
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 76
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYL 98
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKR 268
VA+K +K +P + E +L+++L+H +V L+ ++ T++ + ++ EY+E L
Sbjct: 36 VAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVD 92
Query: 269 YMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLA 327
++ S I L++N + Q+ G+A+ R +HR+L+ N+L+++ K+ADFGLA
Sbjct: 93 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLA 152
Query: 328 R--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGST 384
R + T + W P + G+ + + G + E+ + GR +PG T
Sbjct: 153 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTHGRIPYPGMT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 115 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 228
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 91
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYL 113
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 115 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 228
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 91
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYL 113
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 43 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 102 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 159
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 215
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 78
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYL 100
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 42 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 101 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 158
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 214
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 77
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYL 99
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 44 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 103 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 160
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 216
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 79
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYL 101
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 21 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 136
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 137 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 195
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 196 ILLTELTTKGRVPYPG 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 35 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 208
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 209 VLMWEIYS 216
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 81 SLSEIGFGRIESYFK----LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT- 135
S + +G+G E K L +LG G + V GK R + VA+K IK EG+
Sbjct: 10 STAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSED 64
Query: 136 -AIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 171
I E ++ L H +V L+ + ++ + ++ EY+
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG A+ T T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 198
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 LCG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 277 QGCFGEVWMGTWNGTTR-VAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 392
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 393 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 451
Query: 368 CIFHEMSS-GRPLFPG-------STIEDELRLICSILGPPPD 401
+ E+++ GR +PG +E R+ C PP+
Sbjct: 452 ILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-----PPE 488
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 193 GTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L +
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 285
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLK 307
E ++ E++ +L Y+ +C+ V L++ Q+ + Y + +HR+L
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA 345
Query: 308 PQNLLINERGELKLADFGLARAKSVPTKT--FSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
+N L+ E +K+ADFGL+R + T T + W P L ++S D+
Sbjct: 346 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES--LAYNKFSIKSDVW 403
Query: 365 GVGCIFHEMSS-GRPLFPG 382
G + E+++ G +PG
Sbjct: 404 AFGVLLWEIATYGMSPYPG 422
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 98 KLGQGTYATVFKG---KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
KLG G Y V++G K LT + LKE +E EE ++E ++++E++H N+V L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQL 281
Query: 155 HDIIHTEKCLTLVFEYLE-KDLKRYMDDCS 183
+ E ++ E++ +L Y+ +C+
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECN 311
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 19 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 133
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 192
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 193 VLMWEIYS 200
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVT 153
L +LG G + V GK R + VA+K IK EG+ I E ++ L H +V
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 154 LHDIIHTEKCLTLVFEYL 171
L+ + ++ + ++ EY+
Sbjct: 68 LYGVCTKQRPIFIITEYM 85
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 194 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 368
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 369 ILLTELTTKGRVPYPG 384
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 19 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 134
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 135 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 193
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 194 ILLTELTTKGRVPYPG 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 25 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 199
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 200 ILLTELTTKGRVPYPG 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 193 GTYATVFKGKSRLTDNL----VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + V+KG + + VA+K +K + E + E ++ + H NI+ L +
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGV 114
Query: 249 IHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I K + ++ EY+E L +++ + S+ + L + G+ Y + +HRDL
Sbjct: 115 ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA 174
Query: 308 PQNLLINERGELKLADFGLAR 328
+N+L+N K++DFGL+R
Sbjct: 175 ARNILVNSNLVCKVSDFGLSR 195
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 99 LGQGTYATVFKGKSRLTDNL----VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 154
+G G + V+KG + + VA+K +K + E + E ++ + H NI+ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 155 HDIIHTEKCLTLVFEYLE 172
+I K + ++ EY+E
Sbjct: 112 EGVISKYKPMMIITEYME 129
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 226 TAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKL 284
T E+S++ +L H ++ LHD + + L+ E+L +L + +S V
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 285 FLFQLLRGLAYCHSRRILHRDLKPQNLLINER--GELKLADFGLARAKSVPTKTFSNEVV 342
++ Q GL + H I+H D+KP+N++ + +K+ DFGLA K P +
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA-TKLNPDEIVKVTTA 212
Query: 343 TLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDE 402
T + P+++ + +G + + + SG F G ED+L + ++
Sbjct: 213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG---EDDLETLQNV------- 262
Query: 403 LKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPY 459
+ EF E ++PE A D ++ L + ++R++ +A+ HP+
Sbjct: 263 KRCDWEF-------DEDAFSSVSPE-----AKDFIKNLLQKEPRKRLTVHDALEHPW 307
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 84 EIGFGRIESYFK-LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL 142
E+ G + Y+ L++LG G + V + + T + K I + T E+S+
Sbjct: 43 EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK-YTVKNEISI 101
Query: 143 LRELRHANIVTLHDIIHTEKCLTLVFEYL 171
+ +L H ++ LHD + + L+ E+L
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFL 130
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 194 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 368
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 369 ILLTELTTKGRVPYPG 384
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG A+ T T
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 183
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 184 LCG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 17 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 132
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 133 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 191
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 192 ILLTELTTKGRVPYPG 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVS-------LLRELRHANIVTL 245
G++ V +SR A+K +K E +++V +L + H I+ +
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKE-----IVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 246 HDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ + ++ +Y+E + S K + ++ L Y HS+ I++RD
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-M 364
LKP+N+L+++ G +K+ DFG AK VP T+ T Y P+V + + Y+ SID
Sbjct: 132 LKPENILLDKNGHIKITDFGF--AKYVPDVTYX-LCGTPDYIAPEV-VSTKPYNKSIDWW 187
Query: 365 GVGCIFHEMSSGR-PLFPGSTIEDELRLICSILGPPP 400
G + +EM +G P + +T++ +++ + L PP
Sbjct: 188 SFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 15/216 (6%)
Query: 177 RYMDDCSNILSMNNV--KGTYATVFKGKSRLTDN-LVALKEIKLEHEEGAPCTAIREVSL 233
R + S+ S N+ +G + V+KG RL D LVA+K +K E +G EV +
Sbjct: 31 RELQVASDNFSNKNILGRGGFGKVYKG--RLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 234 LRELRHANIVTLHDIIHTEKCLTLVFEYLEK----DLKRYMDDCSNILSMNNVKLFLFQL 289
+ H N++ L T LV+ Y+ R + L +
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 290 LRGLAYCHSR---RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEV-VTLW 345
RGLAY H +I+HRD+K N+L++E E + DFGLA+ V T+
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 346 YRPPDVL-LGSTEYSTSIDMGVGCIFHEMSSGRPLF 380
+ P+ L G + T + G G + E+ +G+ F
Sbjct: 209 HIAPEYLSTGKSSEKTDV-FGYGVMLLELITGQRAF 243
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 99 LGQGTYATVFKGKSRLTDN-LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
LG+G + V+KG RL D LVA+K +K E +G EV ++ H N++ L
Sbjct: 46 LGRGGFGKVYKG--RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 158 IHTEKCLTLVFEYL 171
T LV+ Y+
Sbjct: 104 CMTPTERLLVYPYM 117
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 194 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 368
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 369 ILLTELTTKGRVPYPG 384
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 20 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 193
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 194 VLMWEIYS 201
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVT 153
L +LG G + V GK R + VA+K IK EG+ I E ++ L H +V
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 154 LHDIIHTEKCLTLVFEYL 171
L+ + ++ + ++ EY+
Sbjct: 69 LYGVCTKQRPIFIITEYM 86
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 15 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 129
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 188
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 189 VLMWEIYS 196
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVT 153
L +LG G + V GK R + VA+K IK EG+ I E ++ L H +V
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 154 LHDIIHTEKCLTLVFEYL 171
L+ + ++ + ++ EY+
Sbjct: 64 LYGVCTKQRPIFIITEYM 81
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+E+G +++ DFG AK V +T
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF--AKRVKGRT 182
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 183 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 153/364 (42%), Gaps = 76/364 (20%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
+G+G + VF+ K+++ D A+K I+L + E A +REV L +L H IV +
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA- 72
Query: 159 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLE 218
+LE +++ ++ I K TD +
Sbjct: 73 -----------WLETPPEKWQEEMDEIWL--------------KDESTD-----WPLSSP 102
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE------KDLKRYMDD 272
AP IR R T + + + V+ Y++ ++LK +M+
Sbjct: 103 SPMDAPSVKIR--------RMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR 154
Query: 273 -CSNILSMNNVKLFLF-QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA- 329
CS + V L +F Q+ + + HS+ ++HRDLKP N+ +K+ DFGL A
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
Query: 330 ------KSVPT-----KTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGR 377
++V T T +V T Y P+ + G+ YS +D+ +G I E+
Sbjct: 215 DQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFEL---- 269
Query: 378 PLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPSESKL--QLLAPEQMD-SDAL 434
L+ ST + +R+I + LK L F T YP E + +L+P + +A
Sbjct: 270 -LYSFSTQMERVRIITDVRN-----LKFPLLF--TQKYPQEHMMVQDMLSPSPTERPEAT 321
Query: 435 DLVQ 438
D+++
Sbjct: 322 DIIE 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 177 RYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRE 236
RY+ D I M +G + VF+ K+++ D A+K I+L + E A +REV L +
Sbjct: 3 RYLTDFEPIQCMG--RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 60
Query: 237 LRHANIV 243
L H IV
Sbjct: 61 LEHPGIV 67
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII--HTEKCLTLVFEYLE 263
T +VA+K +K + +E+ +LR L H +I+ EK L LV EY+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
L+ Y+ S + + + LF Q+ G+AY HS+ +HR+L +N+L++ +K+
Sbjct: 102 LGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 323 DFGLARAKSVPTKTF----SNEVVTLWYRP 348
DFGLA+A + + + WY P
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 25 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 199
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 200 ILLTELTTKGRVPYPG 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 26 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 140
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 199
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 200 VLMWEIYS 207
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVT 153
L +LG G + V GK R + VA+K IK EG+ I E ++ L H +V
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 154 LHDIIHTEKCLTLVFEYL 171
L+ + ++ + ++ EY+
Sbjct: 75 LYGVCTKQRPIFIITEYM 92
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 36/233 (15%)
Query: 193 GTYATVFKGKSRL---TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V +G+ + ++ VA+K +K + E + E S++ + H NI+ L ++
Sbjct: 27 GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV 86
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRGLA----YCHSRRIL 302
+ ++ E++E + L +N+ + + QL LRG+A Y +
Sbjct: 87 TNSMPVMILTEFMENGA------LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 303 HRDLKPQNLLINERGELKLADFGLAR----AKSVPTKTFS--NEVVTLWYRPPDVLLGS- 355
HRDL +N+L+N K++DFGL+R S PT+T S ++ W P +
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKF 200
Query: 356 TEYSTSIDMGVGCIFHEMSSG-RPLFPGS------TIEDELRLICSILGPPPD 401
T S + G+ ++ MS G RP + S IE + R L PPPD
Sbjct: 201 TSASDAWSYGI-VMWEVMSFGERPYWDMSNQDVINAIEQDYR-----LPPPPD 247
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 92 SYFKLDK-LGQGTYATVFKGKSRL---TDNLVALKEIKLEHEEGAPCTAIREVSLLRELR 147
SY K+++ +G G + V +G+ + ++ VA+K +K + E + E S++ +
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 75
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLE 172
H NI+ L ++ + ++ E++E
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFME 100
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 242 IVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR 300
+VTLH TE L L+ +Y+ +L ++ + + V++++ +++ L + H
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKLG 179
Query: 301 ILHRDLKPQNLLINERGELKLADFGLARA-KSVPTKTFSNEVVTLWYRPPDVLLGS-TEY 358
I++RD+K +N+L++ G + L DFGL++ + T+ + T+ Y PD++ G + +
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 359 STSID-MGVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
++D +G + +E+ +G F T++ E I S+ P YP
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPF---TVDGEKNSQAEI---------SRRILKSEPPYPQ 287
Query: 418 ESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAA 452
E M + A DL+Q+ LM D K+R+
Sbjct: 288 E----------MSALAKDLIQRLLMKDPKKRLGCG 312
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ E+L
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HRDL +N+L+ +K
Sbjct: 100 YGSLREYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 321 LADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + K E WY P L +++S + D+ G + +E+
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 213
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 76
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ E+L
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFL 98
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+TL + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LAGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 172 EKDLKRYMDDCSNILSMNNVK-------GTYATVFKGKSRLTDNLVALK------EIKLE 218
E LK++ + N ++ + G++ V K + T N A+K +KL+
Sbjct: 24 EDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNIL 277
E + E +L+ + +V L L +V EY+ ++ ++
Sbjct: 84 QIE----HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-F 138
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTW 196
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 X-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T+
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRTWX-L 199
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 172 EKDLKRYMDDCSNILSMNNVK-------GTYATVFKGKSRLTDNLVALK------EIKLE 218
E LK++ + N ++ + G++ V K + T N A+K +KL+
Sbjct: 24 EDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNIL 277
E + E +L+ + +V L L +V EY+ ++ ++
Sbjct: 84 QIE----HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-F 138
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTW 196
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 X-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 172 EKDLKRYMDDCSNILSMNNVK-------GTYATVFKGKSRLTDNLVALK------EIKLE 218
E LK++ + N ++ + G++ V K + T N A+K +KL+
Sbjct: 24 EDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 219 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMDDCSNIL 277
E + E +L+ + +V L L +V EY+ ++ ++
Sbjct: 84 QIE----HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-F 138
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTW 196
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 X-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 150/356 (42%), Gaps = 92/356 (25%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN--------IVT 244
G ++TV+ VA+K +K E TA+ E+ LL+ +R+++ +V
Sbjct: 48 GHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105
Query: 245 LHDIIHTEKC----LTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSR 299
L D + +VFE L L +++ + L + VK + Q+L+GL Y H++
Sbjct: 106 LLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK 165
Query: 300 -RILHRDLKPQNLLIN-------------------------------------------- 314
RI+H D+KP+N+L++
Sbjct: 166 CRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPL 225
Query: 315 -----ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGC 368
E+ ++K+AD G A K F+ ++ T YR +VL+GS Y+T D+ C
Sbjct: 226 EPKNAEKLKVKIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTAC 281
Query: 369 IFHEMSSGRPLF-PGST-----IEDELRLICSILGPPPDEL----KSKLEFC-------- 410
+ E+++G LF P S ED + LI +LG P +L K EF
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341
Query: 411 ITPVYPS---ESKLQLLAPEQMDSDAL-DLVQKFLMYDAKQRISAANAMRHPYFNS 462
IT + P E ++ Q ++ D + L ++R +AA +RHP+ NS
Sbjct: 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 19 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E +E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 78 LLDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 193
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 194 SAAVWSLGILLYDMVCG 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +++ DFGL AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGL--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG + V G R N VA+K IK + + E S++ +LRH+N+V L +I
Sbjct: 16 KGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 252 EKC-LTLVFEYLEK-DLKRYMDD-CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
EK L +V EY+ K L Y+ ++L + + F + + Y +HRDL
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVG 367
+N+L++E K++DFGL + S T ++ W P L ++ST D+ G
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASSTQDT--GKLPVKWTAPE--ALREKKFSTKSDVWSFG 186
Query: 368 CIFHEMSS-GRPLFPGSTIED 387
+ E+ S GR +P ++D
Sbjct: 187 ILLWEIYSFGRVPYPRIPLKD 207
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
L +G+G + V G R N VA+K IK + + E S++ +LRH+N+V L
Sbjct: 11 LQTIGKGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 156 DIIHTEK-CLTLVFEYLEK 173
+I EK L +V EY+ K
Sbjct: 66 GVIVEEKGGLYIVTEYMAK 84
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NL+I+++G +K+ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 268 RYM--------DDCSNI-------LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + C N LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 241
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 242 LWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG + V G R N VA+K IK + + E S++ +LRH+N+V L +I
Sbjct: 31 KGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 252 EKC-LTLVFEYLEK-DLKRYMDD-CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
EK L +V EY+ K L Y+ ++L + + F + + Y +HRDL
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVG 367
+N+L++E K++DFGL + S T ++ W P L ++ST D+ G
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASSTQDT--GKLPVKWTAPE--ALREKKFSTKSDVWSFG 201
Query: 368 CIFHEMSS-GRPLFPGSTIED 387
+ E+ S GR +P ++D
Sbjct: 202 ILLWEIYSFGRVPYPRIPLKD 222
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
L +G+G + V G R N VA+K IK + + E S++ +LRH+N+V L
Sbjct: 26 LQTIGKGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 156 DIIHTEK-CLTLVFEYLEK 173
+I EK L +V EY+ K
Sbjct: 81 GVIVEEKGGLYIVTEYMAK 99
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 268 RYM--------DDCSNI-------LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + C N LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 226
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 227 LWEIFTLGGSPYPGVPVEELFKLL 250
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E +++++RH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEG--APCTAIREVSLLRELRHANIVTLHDII 249
KG + V + R T + A K+++ + + A+ E +L ++ +V+L
Sbjct: 194 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 253
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T+ L LV + DLK ++ + ++ GL H RI++RDLK
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 308 PQNLLINERGELKLADFGLARAKSVP-TKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MG 365
P+N+L+++ G ++++D GL A VP +T V T+ Y P+V + + Y+ S D
Sbjct: 314 PENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDWWA 370
Query: 366 VGCIFHEMSSGRPLF 380
+GC+ +EM +G+ F
Sbjct: 371 LGCLLYEMIAGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEG--APCTAIREVSLLRELRHANIVTLHDII 249
KG + V + R T + A K+++ + + A+ E +L ++ +V+L
Sbjct: 194 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 253
Query: 250 HTEKCLTLVFEYLEK-DLKRYMDDCSNI-LSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
T+ L LV + DLK ++ + ++ GL H RI++RDLK
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 308 PQNLLINERGELKLADFGLARAKSVP-TKTFSNEVVTLWYRPPDVLLGSTEYSTSID-MG 365
P+N+L+++ G ++++D GL A VP +T V T+ Y P+V + + Y+ S D
Sbjct: 314 PENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDWWA 370
Query: 366 VGCIFHEMSSGRPLF 380
+GC+ +EM +G+ F
Sbjct: 371 LGCLLYEMIAGQSPF 385
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K +P ++E ++++LRH +V L+ ++ +
Sbjct: 28 QGCFGEVWMGTWNGTTR-VAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAA 143
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGLAR + T + W P L G + + G
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 202
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 203 ILLTELTTKGRVPYPG 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG + V G R N VA+K IK + + E S++ +LRH+N+V L +I
Sbjct: 22 KGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 252 EKC-LTLVFEYLEK-DLKRYMDD-CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
EK L +V EY+ K L Y+ ++L + + F + + Y +HRDL
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 136
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVG 367
+N+L++E K++DFGL + S T ++ W P L +ST D+ G
Sbjct: 137 RNVLVSEDNVAKVSDFGLTKEASSTQDT--GKLPVKWTAPE--ALREAAFSTKSDVWSFG 192
Query: 368 CIFHEMSS-GRPLFPGSTIED 387
+ E+ S GR +P ++D
Sbjct: 193 ILLWEIYSFGRVPYPRIPLKD 213
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
L +G+G + V G R N VA+K IK + + E S++ +LRH+N+V L
Sbjct: 17 LQTIGKGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 156 DIIHTEK-CLTLVFEYLEK 173
+I EK L +V EY+ K
Sbjct: 72 GVIVEEKGGLYIVTEYMAK 90
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G + V+ G T VA+K +K + +P ++E ++++LRH +V L+ ++ +
Sbjct: 195 QGCFGEVWMGTWNGTTR-VAIKTLKPGNM--SPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 252 EKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E+ + +V EY+ K L + L + + Q+ G+AY +HRDL+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 310
Query: 310 NLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N+L+ E K+ADFGL R + T + W P L G + + G
Sbjct: 311 NILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFG 369
Query: 368 CIFHEMSS-GRPLFPG 382
+ E+++ GR +PG
Sbjct: 370 ILLTELTTKGRVPYPG 385
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALK------EIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 246
G++ V K + T N A+K +KL+ E + E +L+ + +V L
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLE 128
Query: 247 DIIHTEKCLTLVFEYL-EKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
L +V EY+ ++ ++ S + + + Q++ Y HS +++RD
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-M 364
LKP+NLLI+++G +++ DFG AK V +T+ T Y P+++L S Y+ ++D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-LCGTPEYLAPEIIL-SKGYNKAVDWW 243
Query: 365 GVGCIFHEMSSGRPLF 380
+G + +EM++G P F
Sbjct: 244 ALGVLIYEMAAGYPPF 259
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHA-NIVTLHDI 248
+G +A V + S+ T A K +K + G C A + E+++L + ++ LH++
Sbjct: 39 RGKFAVVRQCISKSTGQEYAAKFLK-KRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97
Query: 249 IHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDL 306
+ L+ EY + + + ++S N+V + Q+L G+ Y H I+H DL
Sbjct: 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDL 157
Query: 307 KPQNLLINE---RGELKLADFGLAR 328
KPQN+L++ G++K+ DFG++R
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
KG + V G R N VA+K IK + + E S++ +LRH+N+V L +I
Sbjct: 203 KGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 252 EKC-LTLVFEYLEK-DLKRYMDD-CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
EK L +V EY+ K L Y+ ++L + + F + + Y +HRDL
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 317
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVG 367
+N+L++E K++DFGL + S T ++ W P L ++ST D+ G
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASSTQDT--GKLPVKWTAPE--ALREKKFSTKSDVWSFG 373
Query: 368 CIFHEMSS-GRPLFPGSTIED 387
+ E+ S GR +P ++D
Sbjct: 374 ILLWEIYSFGRVPYPRIPLKD 394
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
L +G+G + V G R N VA+K IK + + E S++ +LRH+N+V L
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 156 DIIHTEK-CLTLVFEYLEK 173
+I EK L +V EY+ K
Sbjct: 253 GVIVEEKGGLYIVTEYMAK 271
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RY--------MDDCSNI-------LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y M+ +I ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSV--PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 152/358 (42%), Gaps = 96/358 (26%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN--------IVT 244
G ++TV+ VA+K +K E TA+ E+ LL+ +R+++ +V
Sbjct: 32 GHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 89
Query: 245 LHD------IIHTEKCLTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCH 297
L D + T C+ VFE L L +++ + L + VK + Q+L+GL Y H
Sbjct: 90 LLDDFKISGVNGTHICM--VFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 147
Query: 298 SR-RILHRDLKPQNLLIN------------------------------------------ 314
++ RI+H D+KP+N+L++
Sbjct: 148 TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVN 207
Query: 315 -------ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GV 366
E+ ++K+AD G A K F+ ++ T YR +VL+GS Y+T D+
Sbjct: 208 PLEPKNAEKLKVKIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWST 263
Query: 367 GCIFHEMSSGRPLF-PGST-----IEDELRLICSILGPPPDEL----KSKLEFC------ 410
C+ E+++G LF P S ED + LI +LG P +L K EF
Sbjct: 264 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 323
Query: 411 --ITPVYPS---ESKLQLLAPEQMDSDAL-DLVQKFLMYDAKQRISAANAMRHPYFNS 462
IT + P E ++ Q ++ D + L ++R +AA +RHP+ NS
Sbjct: 324 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 381
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LXGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT--EKCLTLVFEYLE 263
T +VA+K+++ EE RE+ +L+ L+H NIV + ++ + L L+ EYL
Sbjct: 39 TGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLF--QLLRGLAYCHSRRILHRDLKPQNLLINERGELK 320
L+ Y+ ++++KL + Q+ +G+ Y ++R +HR+L +N+L+ +K
Sbjct: 98 YGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVK 155
Query: 321 LADFGLARAKSVPTKTFS----NEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEM 373
+ DFGL + + + E WY P L +++S + D+ G + +E+
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES--LTESKFSVASDVWSFGVVLYEL 211
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 96 LDKLGQGTYATVFKGK-SRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
L +LG+G + +V + L DN +VA+K+++ EE RE+ +L+ L+H NI
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNI 74
Query: 152 VTLHDIIHT--EKCLTLVFEYL 171
V + ++ + L L+ EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYL 96
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 35/233 (15%)
Query: 241 NIVTLHDII----HTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLA 294
+IV + D+ H ++CL ++ E +E R + + + + +
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 295 YCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDV 351
+ HS I HRD+KP+NLL + + LKL DFG AK T +Y P+V
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF--AKETTQNALQTPCYTPYYVAPEV 181
Query: 352 LLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC 410
LG +Y S DM +G I + + G P F +T + + P +K ++
Sbjct: 182 -LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ--------AISP---GMKRRIRL- 228
Query: 411 ITPVYPSESKLQLLAPE--QMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+ PE ++ DA L++ L D +R++ M HP+ N
Sbjct: 229 --------GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVTLHDIIH 250
G + V GK R + VA+K IK EG+ I E ++ L H +V L+ +
Sbjct: 20 GQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
++ + ++ EY+ L Y+ + + + + + Y S++ LHRDL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 310 NLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVG 367
N L+N++G +K++DFGL+R T + ++ W PP+VL+ S S S G
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW-SPPEVLMYSKFSSKSDIWAFG 193
Query: 368 CIFHEMSS 375
+ E+ S
Sbjct: 194 VLMWEIYS 201
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT--AIREVSLLRELRHANIVT 153
L +LG G + V GK R + VA+K IK EG+ I E ++ L H +V
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 154 LHDIIHTEKCLTLVFEYL 171
L+ + ++ + ++ EY+
Sbjct: 69 LYGVCTKQRPIFIITEYM 86
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 193 GTYATVFKGKSRL---TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V +G+ + ++ VA+K +K + E + E S++ + H NI+ L ++
Sbjct: 25 GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV 84
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRGLA----YCHSRRIL 302
+ ++ E++E + L +N+ + + QL LRG+A Y +
Sbjct: 85 TNSMPVMILTEFMENGA------LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 138
Query: 303 HRDLKPQNLLINERGELKLADFGLAR----AKSVPTKTFS--NEVVTLWYRPPDVLLGS- 355
HRDL +N+L+N K++DFGL+R S PT T S ++ W P +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 356 TEYSTSIDMGVGCIFHEMSSG-RPLFPGS------TIEDELRLICSILGPPPD 401
T S + G+ ++ MS G RP + S IE + R L PPPD
Sbjct: 199 TSASDAWSYGI-VMWEVMSFGERPYWDMSNQDVINAIEQDYR-----LPPPPD 245
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 92 SYFKLDK-LGQGTYATVFKGKSRL---TDNLVALKEIKLEHEEGAPCTAIREVSLLRELR 147
SY K+++ +G G + V +G+ + ++ VA+K +K + E + E S++ +
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 73
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLE 172
H NI+ L ++ + ++ E++E
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFME 98
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALK------EIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 246
G++ V K + T N A+K +KL+ E + E +L+ + +V L
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLE 108
Query: 247 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
L +V EY+ ++ ++ S + + + Q++ Y HS +++RD
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 306 LKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-M 364
LKP+NLLI+++G +++ DFG AK V +T+ T Y P+++L S Y+ ++D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-LCGTPEYLAPEIIL-SKGYNKAVDWW 223
Query: 365 GVGCIFHEMSSGRPLF 380
+G + +EM++G P F
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 35/233 (15%)
Query: 241 NIVTLHDII----HTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLA 294
+IV + D+ H ++CL ++ E +E R + + + + +
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 295 YCHSRRILHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDV 351
+ HS I HRD+KP+NLL + + LKL DFG AK T +Y P+V
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF--AKETTQNALQTPCYTPYYVAPEV 200
Query: 352 LLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLEFC 410
LG +Y S DM +G I + + G P F +T + + P +K ++
Sbjct: 201 -LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ--------AISP---GMKRRIRL- 247
Query: 411 ITPVYPSESKLQLLAPE--QMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
+ PE ++ DA L++ L D +R++ M HP+ N
Sbjct: 248 --------GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 219
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 220 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 188
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 189 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII--HTEKCLTLVFEYLE 263
T +VA+K +K + +E+ +LR L H +I+ EK L LV EY+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
L+ Y+ S + + + LF Q+ G+AY H++ +HR+L +N+L++ +K+
Sbjct: 102 LGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 323 DFGLARAKSVPTKTF----SNEVVTLWYRP 348
DFGLA+A + + + WY P
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 196
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 197 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSV--PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 137 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 193
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 194 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 199
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGLAR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLAR 195
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 109 IRLEGVVTKSKPVMIVTEYME 129
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 198
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 281 NVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+ + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T+
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRTWX-L 191
Query: 341 VVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 192 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMA-PEALFDRIYTHQSDVWSFGVL 241
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 242 LWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 109 IRLEGVVTKSKPVMIVTEYME 129
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 15 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 74 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNXGVL 132
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 189
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 190 SAAVWSLGILLYDMVCG 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 230 EVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNN-------- 281
E+ ++ ++++ +T II + +++EY+E D D+ +L N
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 282 VKLFLFQLLRGLAYCHS-RRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
+K + +L +Y H+ + I HRD+KP N+L+++ G +KL+DFG ++ + K
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG--ESEYMVDKKIKGS 210
Query: 341 VVTLWYRPPDVLLGSTEYSTS-IDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGP 398
T + PP+ + Y+ + +D+ +G + M + P S + L +I
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN--VVPFSLKISLVELFNNIRTK 268
Query: 399 PPDELKSKLEFCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHP 458
+ + F +YP +K + + ++ +D ++ FL + +RI++ +A++H
Sbjct: 269 NIEYPLDRNHF----LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324
Query: 459 Y 459
+
Sbjct: 325 W 325
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P ++L S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P+++L S Y+ ++D +G + ++M++G P F
Sbjct: 196 WX-LCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 233
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 234 LWEIFTLGGSPYPGVPVEELFKLL 257
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKC--LTLVFEYLE 263
T +VA+K +K + +E+ +LR L H +I+ L LV EY+
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
L+ Y+ S + + + LF Q+ G+AY H++ +HRDL +N+L++ +K+
Sbjct: 119 LGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG 176
Query: 323 DFGLARAKSVPTKTF----SNEVVTLWYRP 348
DFGLA+A + + + WY P
Sbjct: 177 DFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 80 I-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 192 KGTYATVFKGKSRLTDNLVA---LKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD- 247
+G++ TV+KG T VA L++ KL E E L+ L+H NIV +D
Sbjct: 36 RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--EEAEXLKGLQHPNIVRFYDS 93
Query: 248 ---IIHTEKCLTLVFEY-----LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
+ +KC+ LV E L+ LKR+ + + ++ + Q+L+GL + H+R
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRF-----KVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 300 R--ILHRDLKPQNLLI-NERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLLGS 355
I+HRDLK N+ I G +K+ D GLA K +F+ V+ T + P+
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFXAPEXY--E 203
Query: 356 TEYSTSIDM-GVG-CIFHEMSSGRPLFPGSTIEDELRLICSILGPPP------DELKSKL 407
+Y S+D+ G C +S P R + S + P E+K +
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 408 EFCI 411
E CI
Sbjct: 264 EGCI 267
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 85 IGFGRIESYFKLD-KLGQGTYATVFKGKSRLTDNLVA---LKEIKLEHEEGAPCTAIREV 140
+G + K D ++G+G++ TV+KG T VA L++ KL E E
Sbjct: 19 VGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--EEA 76
Query: 141 SLLRELRHANIVTLHD----IIHTEKCLTLVFE 169
L+ L+H NIV +D + +KC+ LV E
Sbjct: 77 EXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 241
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 242 LWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 101 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 160
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 161 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 219
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 220 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235
Query: 313 INERGELKLADFGLARAKS---VPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR + KT + + W P+ L S G +
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDVWSFGVL 294
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 295 MWEIFTLGGSPYPGIPVEELFKLL 318
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 230
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 231 LWEIFTLGGSPYPGVPVEELFKLL 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 241
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 242 LWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA-PEALFDRIYTHQSDVWSFGVL 282
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 283 LWEIFTLGGSPYPGVPVEELFKLL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E I E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 268 RYMD---------------DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ + LS ++ +Q+ RG+ Y S++ +HRDL +N+L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 313 INERGELKLADFGLARA---KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR KT + + W P+ L S G +
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVL 234
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 235 LWEIFTLGGSPYPGVPVEELFKLL 258
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 62 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 121
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 122 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 180
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 181 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 17 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 76
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 77 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 135
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 196 GVCMWEILMHGVKPFQG 212
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 178
Query: 313 INERGELKLADFGLARAKS---VPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR + KT + + W P+ L S G +
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDVWSFGVL 237
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 238 MWEIFTLGGSPYPGIPVEELFKLL 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+ G + VA+K +K +P + + E ++++L+H +V L+ ++ +E
Sbjct: 20 GQFGEVWMGTWN-GNTKVAIKTLK--PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SE 75
Query: 253 KCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
+ + +V EY+ K L D L + N+ Q+ G+AY +HRDL+ N
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSAN 135
Query: 311 LLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC 368
+L+ K+ADFGLAR + T + W P L G + + G
Sbjct: 136 ILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFGI 194
Query: 369 IFHEM-SSGRPLFPG 382
+ E+ + GR +PG
Sbjct: 195 LLTELVTKGRVPYPG 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 71 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 130
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 131 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 189
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 190 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 57 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 116
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 117 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 175
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 176 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 72 PLTRSSRRQSLSEIGFGRIESYFKLDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLE 127
P T Q++ E + +DK+ G G + V G+ +L VA+K +K+
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 128 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+ E + E S++ + H NI+ L ++ K + +V EY+E
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 31 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 143
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 96
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 97 IRLEGVVTKSKPVMIVTEYME 117
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 14 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 80 IRLEGVVTKSKPVMIVTEYME 100
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 61 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 120
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 121 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 179
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 180 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 23 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 82
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 83 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 141
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 142 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 201
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 202 GVCMWEILMHGVKPFQG 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 460 I-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 579 GVCMWEILMHGVKPFQG 595
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 63 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 122
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 123 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 181
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 182 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL 176
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 237 WEIFTLGGSPYPGIPVEELFKLL 259
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 109 IRLEGVVTKSKPVMIVTEYME 129
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 47 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 104
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 105 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 164
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 165 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 107 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 166
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 167 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 225
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 226 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 19 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 78 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 193
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 194 SAAVWSLGILLYDMVCG 210
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 72 PLTRSSRRQSLSEIGFGRIESYFKLDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLE 127
P T Q++ E + +DK+ G G + V G+ +L VA+K +K+
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 128 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+ E + E S++ + H NI+ L ++ K + +V EY+E
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 109 IRLEGVVTKSKPVMIVTEYME 129
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V EY+E
Sbjct: 109 IRLEGVVTKSKPVMIVTEYME 129
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 57 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 116
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 117 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 175
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 176 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 22 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 81
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 82 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 140
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 141 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 200
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 201 GVCMWEILMHGVKPFQG 217
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 48 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 105
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 106 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 165
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 166 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 85
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR------AKSVPTKTFSNEVVTLWYR 347
Y S++ +HRDL +N +++E+ +K+ADFGLAR SV KT + V W
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK-WMA 204
Query: 348 PPDVLLGSTEYSTSIDM-GVGCIFHE-MSSGRPLFP 381
L + +++T D+ G + E M+ G P +P
Sbjct: 205 LES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 20 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 79 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 194
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 195 SAAVWSLGILLYDMVCG 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 20 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 79 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 194
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 195 SAAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 20 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 79 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 138 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 194
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 195 SAAVWSLGILLYDMVCG 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 27 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 84
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 145 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 292 GLAYCHSRRILHRDLKPQNLLI---NERGELKLADFGLARA-------KSVPTKTFSNEV 341
L + H++ I HRDLKP+N+L N+ +K+ DF L + T
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 342 VTLWYRPPDVLLGSTEYSTSID-----MGVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
+ Y P+V+ +E ++ D +G I + + SG P F G D C
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-----CGW- 236
Query: 397 GPPPDELKSKLEFCITPVYPSESKLQLLAPEQ----MDSDALDLVQKFLMYDAKQRISAA 452
+ C ++ S + + P++ + A DL+ K L+ DAKQR+SAA
Sbjct: 237 -----DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 453 NAMRHPYFNSLGPQ 466
++HP+ P+
Sbjct: 292 QVLQHPWVQGCAPE 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 181
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 242 WEIFTLGGSPYPGIPVEELFKLL 264
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 55 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 114
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 115 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 173
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 174 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 41 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V EY+E + L ++ + + QL LRG
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENG------SLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 72 PLTRSSRRQSLSEIGFGRIESYFKLDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLE 127
P T Q++ E + +DK+ G G + V G+ +L VA+K +K+
Sbjct: 23 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 128 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+ E + E S++ + H NI+ L ++ K + +V EY+E
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 127
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 80 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 366 VGCIFHEMSSGRPLFPGSTIED 387
C++ + G F G D
Sbjct: 199 GVCMWEILMHGVKPFQGVKNND 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKS---VPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR + KT + + W P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDVWSFGVL 248
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 21 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 78
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 79 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 138
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 139 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NL+I+++G +++ DFG AK V +T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF--AKRVKGRT 195
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T Y P++++ S Y+ ++D +G + +EM++G P F
Sbjct: 196 WX-LCGTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 56 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 115
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 116 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 174
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 175 LTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 83
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 84 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 143
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 144 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 25 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 84
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 85 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 143
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 203
Query: 366 VGCIFHEMSSGRPLFPGSTIED 387
C++ + G F G D
Sbjct: 204 GVCMWEILMHGVKPFQGVKNND 225
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 81
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 82 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 141
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 142 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 55 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 114
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 115 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 173
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S DM +G I + + G P F
Sbjct: 174 LTEPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 20 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 80 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 47 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 106 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 221
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 222 SAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 47 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 106 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 221
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 222 SAAVWSLGILLYDMVCG 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 48 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 107
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 108 I-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 166
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 167 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 227 GVCMWEILMHGVKPFQG 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 48 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 107 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 222
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 223 SAAVWSLGILLYDMVCG 239
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 18 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 76
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 77 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 135
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 136 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 192
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 193 SAAVWSLGILLYDMVCG 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 42 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 100
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 101 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 159
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 160 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 216
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 217 SAAVWSLGILLYDMVCG 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 35 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 94 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 209
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 210 SAAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 48 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 107 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 222
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 223 SAAVWSLGILLYDMVCG 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 85
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 47 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 106 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 221
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 222 SAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 34 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 93 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 208
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 209 SAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 35 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 94 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 209
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 210 SAAVWSLGILLYDMVCG 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 48 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 107 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 222
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 223 SAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 34 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 93 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 152 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 208
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 209 SAAVWSLGILLYDMVCG 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 35 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 94 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 153 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 209
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 210 SAAVWSLGILLYDMVCG 226
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 15 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 74 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 189
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 190 SAAVWSLGILLYDMVCG 206
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 47 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 106 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 165 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 221
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 222 SAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 48 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 107 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 166 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 222
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 223 SAAVWSLGILLYDMVCG 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII--HTEKCLTLVFEYLE 263
T +VA+K +K RE+ +LR L H +IV EK + LV EY+
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
L+ Y+ + + + + LF Q+ G+AY H++ +HR L +N+L++ +K+
Sbjct: 96 LGSLRDYLP--RHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 153
Query: 323 DFGLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM 373
DFGLA+A + + + WY P+ L Y S G +E+
Sbjct: 154 DFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 206 TDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII--HTEKCLTLVFEYLE 263
T +VA+K +K RE+ +LR L H +IV EK + LV EY+
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 264 -KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLA 322
L+ Y+ + + + + LF Q+ G+AY H++ +HR L +N+L++ +K+
Sbjct: 97 LGSLRDYLP--RHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 154
Query: 323 DFGLARAKSVPTKTF----SNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEM 373
DFGLA+A + + + WY P+ L Y S G +E+
Sbjct: 155 DFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 208
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 62 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 121 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 236
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 237 SAAVWSLGILLYDMVCG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 54 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 113 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 171
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 172 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 228
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 229 SAAVWSLGILLYDMVCG 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 62 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 121 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 236
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 237 SAAVWSLGILLYDMVCG 253
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 460 I-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 579 GVCMWEILMHGVKPFQG 595
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 15 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 74 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 189
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 190 SAAVWSLGILLYDMVCG 206
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 193 GTYATVFKGKSRLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVT 244
G + +V+ G R++DNL VA+K ++ + + G R EV LL+++ + ++
Sbjct: 67 GGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 125
Query: 245 LHDIIHTEKCLTLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRIL 302
L D L+ E E +DL ++ + L + F +Q+L + +CH+ +L
Sbjct: 126 LLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVL 184
Query: 303 HRDLKPQNLLIN-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
HRD+K +N+LI+ RGELKL DFG A K F V Y PP+ + +
Sbjct: 185 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGR 241
Query: 361 SIDM-GVGCIFHEMSSG 376
S + +G + ++M G
Sbjct: 242 SAAVWSLGILLYDMVCG 258
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK----D 265
VA+K I LE + + ++E+ + + H NIV+ + + L LV + L D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 266 LKRYM----DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKL 321
+ +++ + S +L + + L ++L GL Y H +HRD+K N+L+ E G +++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 322 ADFGLA 327
ADFG++
Sbjct: 163 ADFGVS 168
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK----D 265
VA+K I LE + + ++E+ + + H NIV+ + + L LV + L D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 266 LKRYM----DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKL 321
+ +++ + S +L + + L ++L GL Y H +HRD+K N+L+ E G +++
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 322 ADFGLA 327
ADFG++
Sbjct: 158 ADFGVS 163
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 205 LTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIHT--EKCLTLVFE 260
L DN AL +K G RE+ +L+ L IV + + + L LV E
Sbjct: 34 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 93
Query: 261 YLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGEL 319
YL L+ ++ L + + L+ Q+ +G+ Y SRR +HRDL +N+L+ +
Sbjct: 94 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 153
Query: 320 KLADFGLARAKSVPTKTF----SNEVVTLWYRP 348
K+ADFGLA+ + + + WY P
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 336
S + + + Q++ Y HS +++RDLKP+NLLI+++G +++ DFG A+ T
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
L P+++L S Y+ ++D +G + +EM++G P F
Sbjct: 198 LCGTPEAL---APEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ EY K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKS---VPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +++ADFGLAR + KT + + W P+ L S G +
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDVWSFGVL 248
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 205 LTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIHT--EKCLTLVFE 260
L DN AL +K G RE+ +L+ L IV + + + L LV E
Sbjct: 35 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 94
Query: 261 YLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGEL 319
YL L+ ++ L + + L+ Q+ +G+ Y SRR +HRDL +N+L+ +
Sbjct: 95 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 154
Query: 320 KLADFGLARAKSVPTKTF----SNEVVTLWYRP 348
K+ADFGLA+ + + + WY P
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 205 LTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIHT--EKCLTLVFE 260
L DN AL +K G RE+ +L+ L IV + + + L LV E
Sbjct: 47 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 261 YLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGEL 319
YL L+ ++ L + + L+ Q+ +G+ Y SRR +HRDL +N+L+ +
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166
Query: 320 KLADFGLARAKSVPTKTF----SNEVVTLWYRP 348
K+ADFGLA+ + + + WY P
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 192 KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
+G + V +G +N VA+K K + ++E +R+ H +IV L +
Sbjct: 20 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 79
Query: 249 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLK 307
I TE + ++ E +L+ ++ L + ++ L+ +QL LAY S+R +HRD+
Sbjct: 80 I-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 308 PQNLLINERGELKLADFGLAR--AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMG 365
+N+L++ +KL DFGL+R S K ++ W P + ++ + M
Sbjct: 139 ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 366 VGCIFHEMSSGRPLFPG 382
C++ + G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 184 NILSMNNVKGTYATVFKGKSRLTDN-LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 242
NIL +G + V+KG RL D LVA+K +K E +G EV ++ H N+
Sbjct: 36 NILG----RGGFGKVYKG--RLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89
Query: 243 VTLHDIIHTEKCLTLVFEYLEK----DLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHS 298
+ L T LV+ Y+ R + L + RGLAY H
Sbjct: 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 299 R---RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEV-VTLWYRPPDVL-L 353
+I+HRD+K N+L++E E + DFGLA+ V + + P+ L
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLST 209
Query: 354 GSTEYSTSIDMGVGCIFHEMSSGRPLF 380
G + T + G G + E+ +G+ F
Sbjct: 210 GKSSEKTDV-FGYGVMLLELITGQRAF 235
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 99 LGQGTYATVFKGKSRLTDN-LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 157
LG+G + V+KG RL D LVA+K +K E +G EV ++ H N++ L
Sbjct: 38 LGRGGFGKVYKG--RLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 158 IHTEKCLTLVFEYL 171
T LV+ Y+
Sbjct: 96 CMTPTERLLVYPYM 109
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLF 287
+ E +++ L H +IV L II E ++ Y +L Y++ N L + + L+
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTL--- 344
Q+ + +AY S +HRD+ +N+L+ +KL DFGL+R + + + VT
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 190
Query: 345 -WYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGR-PLF 380
W P + ++ + M C++ +S G+ P F
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLF 285
+ E ++++ L+H +V LH ++ T++ + ++ E++ K L D + + + F
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 283
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKS-VPTKTFSNEVVTL 344
Q+ G+A+ R +HRDL+ N+L++ K+ADFGLAR + P K
Sbjct: 284 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK--------- 334
Query: 345 WYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGSTIEDELRLI 392
W P + GS + + G + E+ + GR +PG + + +R +
Sbjct: 335 WTAPEAINFGSFTIKSDV-WSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLF 287
+ E +++ L H +IV L II E ++ Y +L Y++ N L + + L+
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTL--- 344
Q+ + +AY S +HRD+ +N+L+ +KL DFGL+R + + + VT
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 178
Query: 345 -WYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGR-PLF 380
W P + ++ + M C++ +S G+ P F
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 88 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 145
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 205
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 206 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLF 287
+ E +++ L H +IV L II E ++ Y +L Y++ N L + + L+
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 288 QLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTL--- 344
Q+ + +AY S +HRD+ +N+L+ +KL DFGL+R + + + VT
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 174
Query: 345 -WYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGR-PLF 380
W P + ++ + M C++ +S G+ P F
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 30 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 87
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 193 GTYATVFKGKSRLTDNL---VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G+ +L VA+K +K+ + E + E S++ + H NI+ L ++
Sbjct: 33 GEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVV 92
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRGLA----YCHSRRIL 302
K + +V EY+E L N+ + + QL LRG++ Y +
Sbjct: 93 TKSKPVMIVTEYMENG------SLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 303 HRDLKPQNLLINERGELKLADFGLAR 328
HRDL +N+LIN K++DFGL+R
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSR 172
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNL---VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G + V G+ +L VA+K +K+ + E + E S++ + H NI+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 156 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTD 207
++ K + +V EY+E L ++ ++ + G + G L+D
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD 142
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 27 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 84
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 145 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 86
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 30 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 87
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 183 SNILSMNNV--KGTYATVFKGKSRLTDN-----LVALKEIKLEHEEGAPCTAIREVSLLR 235
S I+ N V +G + V+ G L DN A+K + + G + E +++
Sbjct: 34 SLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 91
Query: 236 ELRHANIVTLHDI-IHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
+ H N+++L I + +E +V Y++ DL+ ++ + ++ ++ ++ F Q+ +G+
Sbjct: 92 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 151
Query: 294 AYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ S++ +HRDL +N +++E+ +K+ADFGLAR
Sbjct: 152 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 205 LTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL 262
L + VA+K I+ EGA I E ++ +L H +V L+ + + + LVFE++
Sbjct: 29 LNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 84
Query: 263 EKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKL 321
E L Y+ + + + + G+AY ++HRDL +N L+ E +K+
Sbjct: 85 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKV 144
Query: 322 ADFGLAR 328
+DFG+ R
Sbjct: 145 SDFGMTR 151
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
+ ++G G + V G L + VA+K I+ EGA I E ++ +L H +V
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 154 LHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVAL 212
L+ + + + LVFE++E L Y+ + + + G V +G + L + V
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 213 KEI 215
+++
Sbjct: 127 RDL 129
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ Y K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKS---VPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCI 369
+ E +K+ADFGLAR + KT + + W P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFDRVYTHQSDVWSFGVL 248
Query: 370 FHEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 29/255 (11%)
Query: 193 GTYATVFKGKSRLTDNL--VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
G + +V +G R+ VA+K +K E+ +RE ++ +L + IV L +
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 80
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E L LV E L +++ + ++NV L Q+ G+ Y + +HRDL +
Sbjct: 81 AE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAAR 139
Query: 310 NLLINERGELKLADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
N+L+ R K++DFGL++A S T + + WY P + ++S+ D+
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFSSRSDVW 197
Query: 365 --GVGCIFHEMSSGRPLFPG-------STIEDELRLICSILGPP--PDELKSKLEFCITP 413
GV ++ +S G+ + + IE R+ C PP P EL + + C
Sbjct: 198 SYGV-TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC----PPECPPELYALMSDCW-- 250
Query: 414 VYPSESKLQLLAPEQ 428
+Y E + L EQ
Sbjct: 251 IYKWEDRPDFLTVEQ 265
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHANIVTLHDIIH 250
KG + V+ G+ VA++ I +E + A REV R+ RH N+V
Sbjct: 43 KGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 251 TEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ L ++ + + L + D +L +N + ++++G+ Y H++ ILH+DLK +
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSK 159
Query: 310 NLLINERGELKLADFGL 326
N+ + G++ + DFGL
Sbjct: 160 NVFYDN-GKVVITDFGL 175
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI-REVSLLRELRHANIVTLHDI 157
+G+G + V+ G+ VA++ I +E + A REV R+ RH N+V
Sbjct: 41 IGKGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 158 IHTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIK 216
+ L ++ + + L + D +L +N + + KG L + K++K
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK 157
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+KG R VALK E +G E+ L RH ++V+L
Sbjct: 50 GVFGKVYKGVLR-DGAKVALKRRTPESSQGIE-EFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 253 KCLTLVFEYLEK-DLKRYM---DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ L+++Y+E +LKR++ D + +S RGL Y H+R I+HRD+K
Sbjct: 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKS 167
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVV--TLWYRPPDVLLGS--TEYSTSIDM 364
N+L++E K+ DFG+++ + +T VV TL Y P+ + TE S
Sbjct: 168 INILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSF 227
Query: 365 GV 366
GV
Sbjct: 228 GV 229
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
+G G + V+KG R VALK E +G E+ L RH ++V+L
Sbjct: 47 IGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIE-EFETEIETLSFCRHPHLVSLIGFC 104
Query: 159 HTEKCLTLVFEYLEK-DLKRYM 179
+ L+++Y+E +LKR++
Sbjct: 105 DERNEMILIYKYMENGNLKRHL 126
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G + V+KG R VALK E +G E+ L RH ++V+L
Sbjct: 50 GVFGKVYKGVLR-DGAKVALKRRTPESSQGIE-EFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 253 KCLTLVFEYLEK-DLKRYM---DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ L+++Y+E +LKR++ D + +S RGL Y H+R I+HRD+K
Sbjct: 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKS 167
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVV--TLWYRPPDVLLGS--TEYSTSIDM 364
N+L++E K+ DFG+++ + +T VV TL Y P+ + TE S
Sbjct: 168 INILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSF 227
Query: 365 GV 366
GV
Sbjct: 228 GV 229
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 99 LGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 158
+G G + V+KG R VALK E +G E+ L RH ++V+L
Sbjct: 47 IGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIE-EFETEIETLSFCRHPHLVSLIGFC 104
Query: 159 HTEKCLTLVFEYLEK-DLKRYM 179
+ L+++Y+E +LKR++
Sbjct: 105 DERNEMILIYKYMENGNLKRHL 126
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + E + E+ +++ + +H NI+ L + L ++ Y K +L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 268 RYMD-----------DCSNI----LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLL 312
Y+ D + + ++ ++ +QL RG+ Y S++ +HRDL +N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIF 370
+ E +K+ADFGLAR + K +N + + + P+ L S G +
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 371 HEMSS-GRPLFPGSTIEDELRLI 392
E+ + G +PG +E+ +L+
Sbjct: 250 WEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 31/204 (15%)
Query: 255 LTLVFEYLEKDLKRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI 313
+ L+FE L L + + N + ++KL+ ++L+ L Y + H DLKP+N+L+
Sbjct: 111 MCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170
Query: 314 NE-------------------------RGELKLADFGLARAKSVPTKTFSNEVVTLWYRP 348
++ +KL DFG A KS + N T YR
Sbjct: 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIIN---TRQYRA 227
Query: 349 PDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKL 407
P+V+L + + S DM GC+ E+ +G LF + L ++ SI+ P P + +
Sbjct: 228 PEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEA 286
Query: 408 EFCITPVYPSESKLQLLAPEQMDS 431
Y ++ +L+L PE S
Sbjct: 287 TKTNGSKYVNKDELKLAWPENASS 310
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G + V G L + VA+K I+ EGA I E ++ +L H +V L+ +
Sbjct: 21 GQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ + LVFE++E L Y+ + + + + G+AY ++HRDL +
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 135
Query: 310 NLLINERGELKLADFGLAR 328
N L+ E +K++DFG+ R
Sbjct: 136 NCLVGENQVIKVSDFGMTR 154
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
+ ++G G + V G L + VA+K I+ EGA I E ++ +L H +V
Sbjct: 15 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 154 LHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVAL 212
L+ + + + LVFE++E L Y+ + + + G V +G + L + V
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 213 KEI 215
+++
Sbjct: 130 RDL 132
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 30/160 (18%)
Query: 196 ATVFKGKSRLTDNLVALKEIKLEHEEGAPC---TAIREVSLLRELRHANIVTLHDIIHTE 252
AT F K R VA+K +K E +P + E ++L+++ H +++ L+ +
Sbjct: 42 ATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 253 KCLTLVFEYLE-KDLKRYMDDCSNI-----------------------LSMNNVKLFLFQ 288
L L+ EY + L+ ++ + + L+M ++ F +Q
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ +G+ Y +++HRDL +N+L+ E ++K++DFGL+R
Sbjct: 159 ISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 30/160 (18%)
Query: 196 ATVFKGKSRLTDNLVALKEIKLEHEEGAPC---TAIREVSLLRELRHANIVTLHDIIHTE 252
AT F K R VA+K +K E +P + E ++L+++ H +++ L+ +
Sbjct: 42 ATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 253 KCLTLVFEYLE-KDLKRYMDDCSNI-----------------------LSMNNVKLFLFQ 288
L L+ EY + L+ ++ + + L+M ++ F +Q
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ +G+ Y +++HRDL +N+L+ E ++K++DFGL+R
Sbjct: 159 ISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G + V G L + VA+K I+ EGA I E ++ +L H +V L+ +
Sbjct: 18 GQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ + LVFE++E L Y+ + + + + G+AY ++HRDL +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 132
Query: 310 NLLINERGELKLADFGLAR 328
N L+ E +K++DFG+ R
Sbjct: 133 NCLVGENQVIKVSDFGMTR 151
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
+ ++G G + V G L + VA+K I+ EGA I E ++ +L H +V
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 154 LHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVAL 212
L+ + + + LVFE++E L Y+ + + + G V +G + L + V
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 213 KEI 215
+++
Sbjct: 127 RDL 129
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G + V G L + VA+K I+ EGA I E ++ +L H +V L+ +
Sbjct: 16 GQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ + LVFE++E L Y+ + + + + G+AY ++HRDL +
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 130
Query: 310 NLLINERGELKLADFGLAR 328
N L+ E +K++DFG+ R
Sbjct: 131 NCLVGENQVIKVSDFGMTR 149
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVT 153
+ ++G G + V G L + VA+K I+ EGA I E ++ +L H +V
Sbjct: 10 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 154 LHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVAL 212
L+ + + + LVFE++E L Y+ + + + G V +G + L + V
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 213 KEI 215
+++
Sbjct: 125 RDL 127
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 193 GTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G +L VA+K +K + E + E S++ + H N++ L ++
Sbjct: 44 GEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV 103
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRGLA----YCHSRRIL 302
+ ++ E++E + L N+ + + QL LRG+A Y +
Sbjct: 104 TKSTPVMIITEFMENG------SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 303 HRDLKPQNLLINERGELKLADFGLAR----AKSVPTKT--FSNEVVTLWYRPPDVLLGST 356
HRDL +N+L+N K++DFGL+R S PT T ++ W P +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--R 215
Query: 357 EYSTSIDM-GVGCIFHE-MSSG-RPLFPGS------TIEDELRLICSILGPPPDELKSKL 407
+++++ D+ G + E MS G RP + + IE + RL PPP + S L
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL------PPPMDCPSAL 269
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 99 LGQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G + V G +L VA+K +K + E + E S++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 156 DIIHTEKCLTLVFEYLE 172
++ + ++ E++E
Sbjct: 101 GVVTKSTPVMIITEFME 117
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 193 GTYATVFKGKSRLT---DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G+ +L D VA+K +K+ + E + E S++ + H N+V L ++
Sbjct: 54 GEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV 113
Query: 250 HTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
K + +V E++E L ++ ++ + L + G+ Y +HRDL
Sbjct: 114 TRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAA 173
Query: 309 QNLLINERGELKLADFGLAR 328
+N+L+N K++DFGL+R
Sbjct: 174 RNILVNSNLVCKVSDFGLSR 193
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 99 LGQGTYATVFKGKSRLT---DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G + V G+ +L D VA+K +K+ + E + E S++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 156 DIIHTEKCLTLVFEYLE 172
++ K + +V E++E
Sbjct: 111 GVVTRGKPVMIVIEFME 127
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVTLHDIIH 250
G + V G L + VA+K IK EG+ I E ++ +L H +V L+ +
Sbjct: 38 GQFGLVHLGY-WLNKDKVAIKTIK----EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ + LVFE++E L Y+ + + + + G+AY ++HRDL +
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 152
Query: 310 NLLINERGELKLADFGLAR 328
N L+ E +K++DFG+ R
Sbjct: 153 NCLVGENQVIKVSDFGMTR 171
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPC--TAIREVSLLRELRHANIVT 153
+ ++G G + V G L + VA+K IK EG+ I E ++ +L H +V
Sbjct: 32 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIK----EGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 154 LHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVAL 212
L+ + + + LVFE++E L Y+ + + + G V +G + L + V
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146
Query: 213 KEI 215
+++
Sbjct: 147 RDL 149
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 14 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V E +E + L ++ + + QL LRG
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENG------SLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V E +E
Sbjct: 80 IRLEGVVTKSKPVMIVTEXME 100
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V E +E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 72 PLTRSSRRQSLSEIGFGRIESYFKLDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLE 127
P T Q++ E + +DK+ G G + V G+ +L VA+K +K+
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 128 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+ E + E S++ + H NI+ L ++ K + +V E +E
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXME 129
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 181 DCSNILSMNNV--KGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLR 235
D +NI S++ V G + V G+ +L VA+K +K+ + E + E S++
Sbjct: 43 DATNI-SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 236 ELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRG 292
+ H NI+ L ++ K + +V E +E + L ++ + + QL LRG
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENG------SLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 293 LA----YCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+A Y +HRDL +N+LIN K++DFGL+R
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSR 195
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 96 LDKL-GQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANI 151
+DK+ G G + V G+ +L VA+K +K+ + E + E S++ + H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 152 VTLHDIIHTEKCLTLVFEYLE 172
+ L ++ K + +V E +E
Sbjct: 109 IRLEGVVTKSKPVMIVTEXME 129
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 192 KGTYATVFKGK-SRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDI 248
KG + +V + L DN AL +K G RE+ +L+ L IV +
Sbjct: 17 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV 76
Query: 249 IHT--EKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
+ L LV EYL L+ ++ L + + L+ Q+ +G+ Y SRR +HRD
Sbjct: 77 SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 136
Query: 306 LKPQNLLINERGELKLADFGLARA----KSVPTKTFSNEVVTLWYRP 348
L +N+L+ +K+ADFGLA+ K + WY P
Sbjct: 137 LAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEH-------EEGAPCTAIREVSLLRELRHANIVTL 245
G + V+ + + V +K IK E E+ E+++L + HANI+ +
Sbjct: 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV 94
Query: 246 HDIIHTEKCLTLVFEYLEK--DLKRYMDDCSNILSMNNVKLFLF-QLLRGLAYCHSRRIL 302
DI + LV E DL ++D + + ++F QL+ + Y + I+
Sbjct: 95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL--DEPLASYIFRQLVSAVGYLRLKDII 152
Query: 303 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
HRD+K +N++I E +KL DFG A A K F T+ Y P+VL+G+ +
Sbjct: 153 HRDIKDENIVIAEDFTIKLIDFGSA-AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPEL 211
Query: 363 DM 364
+M
Sbjct: 212 EM 213
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 91 ESYFKLDKLGQGTYATVFKGKSRLTDNLVALKEIKLEH-------EEGAPCTAIREVSLL 143
+ Y + LG G + V+ + + V +K IK E E+ E+++L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 144 RELRHANIVTLHDIIHTEKCLTLVFE 169
+ HANI+ + DI + LV E
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVME 109
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLF 285
+ E ++++ L+H +V LH ++ T++ + ++ E++ K L D + + + F
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVT 343
Q+ G+A+ R +HRDL+ N+L++ K+ADFGLAR + T +
Sbjct: 290 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 344 LWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGSTIEDELRLI 392
W P + GS + + G + E+ + GR +PG + + +R +
Sbjct: 350 KWTAPEAINFGSFTIKSDV-WSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD--LKRYMDDCSNILSMNNVKLF 285
+ E ++++ L+H +V LH ++ T++ + ++ E++ K L D + + + F
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 116
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVT 343
Q+ G+A+ R +HRDL+ N+L++ K+ADFGLAR + T +
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 344 LWYRPPDVLLGSTEYSTSIDMGVGCIFHEM-SSGRPLFPGSTIEDELRLI 392
W P + GS + + G + E+ + GR +PG + + +R +
Sbjct: 177 KWTAPEAINFGSFTIKSDV-WSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 30/160 (18%)
Query: 196 ATVFKGKSRLTDNLVALKEIKLEHEEGAPC---TAIREVSLLRELRHANIVTLHDIIHTE 252
AT F K R VA+K +K E +P + E ++L+++ H +++ L+ +
Sbjct: 42 ATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 253 KCLTLVFEYLE-KDLKRYMDDCSNI-----------------------LSMNNVKLFLFQ 288
L L+ EY + L+ ++ + + L+M ++ F +Q
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 289 LLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
+ +G+ Y ++HRDL +N+L+ E ++K++DFGL+R
Sbjct: 159 ISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 126
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDN---LVALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 83 LIRLYGVVLT 92
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 120
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 164
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDN---LVALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 77 LIRLYGVVLT 86
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 126
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDN---LVALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 83 LIRLYGVVLT 92
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 191 VKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELR-HANIVTLHD-- 247
+G +A V++ + + ALK + L +EE I+EV +++L H NIV
Sbjct: 37 AEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 248 --------------IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
++ TE C + E+L+K R C +L K+F +Q R +
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL-----KIF-YQTCRAV 149
Query: 294 AYCHSRR--ILHRDLKPQNLLINERGELKLADFGLARAKS-VPTKTFSNEV--------- 341
+ H ++ I+HRDLK +NLL++ +G +KL DFG A S P ++S +
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 342 --VTLWYRPPDVL 352
T YR P+++
Sbjct: 210 RNTTPMYRTPEII 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 227 AIREVSL-LRELRHANIVTLHDIIHT----EKCLTLVFEYLEKD--LKRYMDDCSNILSM 279
A REV L R + +IV + D+ KCL +V E L+ R D +
Sbjct: 101 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTE 160
Query: 280 NNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER---GELKLADFGLARAKSVPTKT 336
+ + Y HS I HRD+KP+NLL + LKL DFG A+ ++ +
Sbjct: 161 REASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNS 219
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSID-MGVGCIFHEMSSGRPLF 380
+ T +Y P+V LG +Y S D +G I + + G P F
Sbjct: 220 LTTPCYTPYYVAPEV-LGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 120
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 164
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDN---LVALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 77 LIRLYGVVLT 86
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 116
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDN---LVALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 73 LIRLYGVVLT 82
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 116
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNL---VALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 73 LIRLYGVVLT 82
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 209 LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL-EKDLK 267
LVA+K +K E E A RE LL L+H +IV + + L +VFEY+ DL
Sbjct: 73 LVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 268 RYM--------------DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI 313
R++ D L + + Q+ G+ Y +HRDL +N L+
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 191
Query: 314 NERGELKLADFGLAR 328
+ +K+ DFG++R
Sbjct: 192 GQGLVVKIGDFGMSR 206
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 98 KLGQGTYATVFKGKSR-----LTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+LG+G + VF + LVA+K +K E E A RE LL L+H +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 106
Query: 153 TLHDIIHTEKCLTLVFEYL-EKDLKRYM 179
+ + L +VFEY+ DL R++
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 228 IREVSLLRELRHANIVTLHDIIHTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLF 285
IREV+ + L H N++ L+ ++ T + +V E L L R + L + + +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRY 116
Query: 286 LFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA 329
Q+ G+ Y S+R +HRDL +NLL+ R +K+ DFGL RA
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 96 LDKLGQGTYATVFKGKSRLTDNL---VALKEIKLE--HEEGAPCTAIREVSLLRELRHAN 150
L+KLG G++ V +G+ VA+K +K + + A IREV+ + L H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 151 IVTLHDIIHT 160
++ L+ ++ T
Sbjct: 73 LIRLYGVVLT 82
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 57/333 (17%)
Query: 181 DCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 240
D IL G ++TV+ K + + VA+K ++ ++ A E+ LL+ + A
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR--GDKVYTEAAEDEIKLLQRVNDA 75
Query: 241 N-----------IVTLHDIIHTEK----CLTLVFEYLEKDL----KRYMDDCSNILSMNN 281
+ I+ L D + + + +VFE L ++L K+Y + +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE---HRGIPLIY 132
Query: 282 VKLFLFQLLRGLAYCHSR-RILHRDLKPQNLLIN------ERGELKLADFGLARAKSVPT 334
VK QLL GL Y H R I+H D+KP+N+L+ ++K+AD G A
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYD 189
Query: 335 KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLF---PGSTI---EDE 388
+ ++N + T YR P+VLLG+ + C+ E+ +G LF G + +D
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 389 LRLICSILGPPPDEL-----KSKLEFCITPVYPSESKLQLLAPEQMDSDAL--------- 434
+ I +LG P L ++ F + + SKL+ E + ++
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 435 --DLVQKFLMYDAKQRISAANAMRHPYF-NSLG 464
D + L D ++R A + HP+ ++LG
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 57/333 (17%)
Query: 181 DCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA 240
D IL G ++TV+ K + + VA+K ++ ++ A E+ LL+ + A
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR--GDKVYTEAAEDEIKLLQRVNDA 75
Query: 241 N-----------IVTLHDIIHTEK----CLTLVFEYLEKDL----KRYMDDCSNILSMNN 281
+ I+ L D + + + +VFE L ++L K+Y + +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE---HRGIPLIY 132
Query: 282 VKLFLFQLLRGLAYCHSR-RILHRDLKPQNLLIN------ERGELKLADFGLARAKSVPT 334
VK QLL GL Y H R I+H D+KP+N+L+ ++K+AD G A
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYD 189
Query: 335 KTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLF---PGSTI---EDE 388
+ ++N + T YR P+VLLG+ + C+ E+ +G LF G + +D
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 389 LRLICSILGPPPDEL-----KSKLEFCITPVYPSESKLQLLAPEQMDSDAL--------- 434
+ I +LG P L ++ F + + SKL+ E + ++
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 435 --DLVQKFLMYDAKQRISAANAMRHPYF-NSLG 464
D + L D ++R A + HP+ ++LG
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 269 YMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y D + L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 329 --AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTI 385
K + + L + P+ + S G + E+ S G +PG I
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
Query: 386 EDEL 389
++E
Sbjct: 253 DEEF 256
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 269 YMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR 328
Y D + L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 329 --AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTI 385
K + + L + P+ + S G + E+ S G +PG I
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
Query: 386 EDEL 389
++E
Sbjct: 253 DEEF 256
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 25/253 (9%)
Query: 193 GTYATVFKGKSRLTDNL--VALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH 250
G + +V +G R+ VA+K +K E+ +RE ++ +L + IV L +
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 406
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
E L LV E L +++ + ++NV L Q+ G+ Y + +HR+L +
Sbjct: 407 AE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAAR 465
Query: 310 NLLINERGELKLADFGLARA----KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM- 364
N+L+ R K++DFGL++A S T + + WY P + ++S+ D+
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFSSRSDVW 523
Query: 365 --GVGCIFHEMSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCITPVY 415
GV ++ +S G+ + + IE R+ C PP EL + + C +Y
Sbjct: 524 SYGV-TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP--ELYALMSDCW--IY 578
Query: 416 PSESKLQLLAPEQ 428
E + L EQ
Sbjct: 579 KWEDRPDFLTVEQ 591
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 17/186 (9%)
Query: 204 RLTDNL-VALKEIKLEH--EEGAPCTAIR---EVSLLRELR--HANIVTLHDIIHTEKCL 255
R++DNL VA+K ++ + + G R EV LL+++ + ++ L D
Sbjct: 72 RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 131
Query: 256 TLVFEYLE--KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI 313
L+ E E +DL ++ + L + F +Q+L + +CH+ +LHRD+K +N+LI
Sbjct: 132 VLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
Query: 314 N-ERGELKLADFGL-ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIF 370
+ RGELKL DFG A K F V Y PP+ + + S + +G +
Sbjct: 191 DLNRGELKLIDFGSGALLKDTVYTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILL 247
Query: 371 HEMSSG 376
++M G
Sbjct: 248 YDMVCG 253
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 209 LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL-EKDLK 267
LVA+K +K E E A RE LL L+H +IV + + L +VFEY+ DL
Sbjct: 44 LVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 268 RYM--------------DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI 313
R++ D L + + Q+ G+ Y +HRDL +N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 314 NERGELKLADFGLAR 328
+ +K+ DFG++R
Sbjct: 163 GQGLVVKIGDFGMSR 177
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 98 KLGQGTYATVFKGKSR-----LTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+LG+G + VF + LVA+K +K E E A RE LL L+H +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 77
Query: 153 TLHDIIHTEKCLTLVFEYL-EKDLKRYM 179
+ + L +VFEY+ DL R++
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 208 NLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEK------CLTLVF-- 259
+ ALK I L HE+ A RE + R H NI+ L E+ L L F
Sbjct: 55 HFYALKRI-LCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113
Query: 260 -EYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGE 318
L +++R + D N L+ + + L + RGL H++ HRDLKP N+L+ + G+
Sbjct: 114 RGTLWNEIER-LKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQ 172
Query: 319 LKLADFGL---------ARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSID-----M 364
L D G +++ + ++ + T+ YR P++ S + ID
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF--SVQSHCVIDERTDVW 230
Query: 365 GVGCIFHEMSSG 376
+GC+ + M G
Sbjct: 231 SLGCVLYAMMFG 242
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 209 LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYL-EKDLK 267
LVA+K +K E E A RE LL L+H +IV + + L +VFEY+ DL
Sbjct: 50 LVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 268 RYM--------------DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLI 313
R++ D L + + Q+ G+ Y +HRDL +N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 314 NERGELKLADFGLAR 328
+ +K+ DFG++R
Sbjct: 169 GQGLVVKIGDFGMSR 183
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 98 KLGQGTYATVFKGKSR-----LTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+LG+G + VF + LVA+K +K E E A RE LL L+H +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIV 83
Query: 153 TLHDIIHTEKCLTLVFEYL-EKDLKRYM 179
+ + L +VFEY+ DL R++
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 32/155 (20%)
Query: 272 DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINER-GELKLADFGLARA- 329
D N LS V+ ++ L + L H I+HRD+KP N L N R + L DFGLA+
Sbjct: 109 DILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168
Query: 330 --------KSVPTKT-------------------FSNEVVTLWYRPPDVLLGSTEYSTSI 362
K V ++ + T +R P+VL +T+I
Sbjct: 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI 228
Query: 363 DM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSIL 396
DM G IF + SGR +P D+L + I+
Sbjct: 229 DMWSAGVIFLSLLSGR--YPFYKASDDLTALAQIM 261
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G++ V + K + T A+K+++LE + E+ L IV L+ +
Sbjct: 68 RGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAVRE 121
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ + E LE + L + +L Q L GL Y H+RRILH D+K N+
Sbjct: 122 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 181
Query: 312 LINERGE-LKLADFGLA 327
L++ G L DFG A
Sbjct: 182 LLSSDGSRAALCDFGHA 198
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 15/106 (14%)
Query: 417 SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF--NSLGPQVHELSDTQ 474
+KLQ L PE D++ + L +K D + R P S G +VH + D Q
Sbjct: 23 GSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFG-EVHRMKDKQ 81
Query: 475 S------------IFSLPHIKLTSNPTDGGLLPFYGQKSEKRWTGL 508
+ +F + + + + ++P YG E W +
Sbjct: 82 TGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 127
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 142/355 (40%), Gaps = 92/355 (25%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN--------IVT 244
G ++TV+ VA+K +K TA+ E+ LL+ +R ++ +V
Sbjct: 42 GHFSTVWLCWDMQGKRFVAMKVVKSAQHYTE--TALDEIKLLKCVRESDPSDPNKDMVVQ 99
Query: 245 LHDIIHTEKC----LTLVFEYLEKDLKRYMDDCS-NILSMNNVKLFLFQLLRGLAYCHSR 299
L D + +VFE L L +++ + L + VK + Q+L+GL Y HS+
Sbjct: 100 LIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSK 159
Query: 300 -RILHRDLKPQN----------------------------------------LLIN---- 314
+I+H D+KP+N LL+N
Sbjct: 160 CKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDP 219
Query: 315 ---ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIF 370
++ +K+AD G A K F+ ++ T YR +VL+G+ YST D+ C+
Sbjct: 220 RNADKIRVKIADLGNA---CWVHKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMA 275
Query: 371 HEMSSGRPLFPG------STIEDELRLICSILGPPPDEL----KSKLEFC--------IT 412
E+++G LF S ED + I +LG P K EF IT
Sbjct: 276 FELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHIT 335
Query: 413 PVYPSESKLQLLA-----PEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFNS 462
+ P S +L P + + D + L ++R SA +RHP+ NS
Sbjct: 336 KLKPW-SLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 389
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 180 DDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIK--LEHEEGAPCTAIREVSLLREL 237
DD I+ + +G Y V K + + ++A+K I+ + +E ++S+ R +
Sbjct: 51 DDLEPIMELG--RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-RTV 107
Query: 238 RHANIVTLHDIIHTEK----CLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
VT + + E C+ L+ L+K K+ +D I + + +++ L
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKAL 166
Query: 294 AYCHSR-RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
+ HS+ ++HRD+KP N+LIN G++K+ DFG++ V + + + Y P+ +
Sbjct: 167 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERI 225
Query: 353 ---LGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
L YS D+ +G E++ LR G P +LK +E
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAI-------------LRFPYDSWGTPFQQLKQVVE 272
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
E QL A ++ ++ +D + L ++K+R + M+HP+F
Sbjct: 273 ---------EPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 157 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIK 216
++ TEK + +EY E+ + ++ L + +G++ V + + + T A+K+++
Sbjct: 56 VLLTEKLKPVDYEYREE-----VHWATHQLRLG--RGSFGEVHRMEDKQTGFQCAVKKVR 108
Query: 217 LE---HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDC 273
LE EE C L IV L+ + + + E LE +
Sbjct: 109 LEVFRAEELMACAG---------LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE 159
Query: 274 SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERG-ELKLADFGLARAKSV 332
L + +L Q L GL Y HSRRILH D+K N+L++ G L DFG A +
Sbjct: 160 QGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCL 217
Query: 333 PTKTFSNEVVTLWYRP-------PDVLLGSTEYSTSIDMGVGC--IFHEMSSGRPL 379
+++T Y P P+V+LG + +D+ C + H ++ P
Sbjct: 218 QPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G++ V + K + T A+K+++LE + E+ L IV L+ +
Sbjct: 84 RGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAVRE 137
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ + E LE + L + +L Q L GL Y H+RRILH D+K N+
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 197
Query: 312 LINERGE-LKLADFGLA 327
L++ G L DFG A
Sbjct: 198 LLSSDGSRAALCDFGHA 214
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 15/104 (14%)
Query: 419 SKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF--NSLGPQVHELSDTQS- 475
+KLQ L PE D++ + L +K D + R P S G +VH + D Q+
Sbjct: 41 AKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFG-EVHRMKDKQTG 99
Query: 476 -----------IFSLPHIKLTSNPTDGGLLPFYGQKSEKRWTGL 508
+F + + + + ++P YG E W +
Sbjct: 100 FQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 143
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHT 251
+G++ V + K + T A+K+++LE + E+ L IV L+ +
Sbjct: 82 RGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAVRE 135
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
+ + E LE + L + +L Q L GL Y H+RRILH D+K N+
Sbjct: 136 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 195
Query: 312 LINERGE-LKLADFGLA 327
L++ G L DFG A
Sbjct: 196 LLSSDGSRAALCDFGHA 212
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 417 SESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYF--NSLGPQVHELSDTQ 474
+KLQ L PE D++ + L +K D + R P S G +VH + D Q
Sbjct: 37 GSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFG-EVHRMKDKQ 95
Query: 475 S------------IFSLPHIKLTSNPTDGGLLPFYGQKSEKRWT 506
+ +F + + + + ++P YG E W
Sbjct: 96 TGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 139
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLF 287
+E L L+H NI+ L + E L LV E+ L R + + + + +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAV 112
Query: 288 QLLRGLAYCHSRR---ILHRDLKPQNLLINERGE--------LKLADFGLARAKSVPTKT 336
Q+ RG+ Y H I+HRDLK N+LI ++ E LK+ DFGLAR TK
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 337 FSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSSGRPLFPG 382
+ + P+V+ S S G + E+ +G F G
Sbjct: 173 SAAGAYA--WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 193 GTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G+ ++ VA+K +K + + + E S++ + H NI+ L ++
Sbjct: 25 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV 84
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLL-------RGLAYCHSRRIL 302
K + ++ EY+E L N+ + + QL+ G+ Y +
Sbjct: 85 TKCKPVMIITEYMENG------SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 303 HRDLKPQNLLINERGELKLADFGLARA-KSVPTKTFSNEV--VTLWYRPPDVLLGSTEYS 359
HRDL +N+L+N K++DFG++R + P ++ + + + P+ + S
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 360 TSIDMGVGCIFHE-MSSG-RPLFPGS------TIEDELRLICSILGPPP 400
S G + E MS G RP + S IE+ RL PPP
Sbjct: 199 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------PPP 241
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 92 SYFKLDK-LGQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELR 147
S K++K +G G + V G+ ++ VA+K +K + + + E S++ +
Sbjct: 14 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD 73
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLE 172
H NI+ L ++ K + ++ EY+E
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYME 98
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 192 KGTYATVFKG------KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTL 245
KG + V+ G ++R+ + +L I + A +RE L+R L H N++ L
Sbjct: 31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA---FLREGLLMRGLNHPNVLAL 87
Query: 246 HDIIHTEKCLT-LVFEYL-EKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
I+ + L ++ Y+ DL +++ ++ ++ F Q+ RG+ Y ++ +H
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 304 RDLKPQNLLINERGELKLADFGLAR 328
RDL +N +++E +K+ADFGLAR
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLAR 172
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 193 GTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G+ ++ VA+K +K + + + E S++ + H NI+ L ++
Sbjct: 40 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV 99
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLL-------RGLAYCHSRRIL 302
K + ++ EY+E L N+ + + QL+ G+ Y +
Sbjct: 100 TKCKPVMIITEYMENG------SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 303 HRDLKPQNLLINERGELKLADFGLARA-KSVPTKTFSNEV--VTLWYRPPDVLLGSTEYS 359
HRDL +N+L+N K++DFG++R + P ++ + + + P+ + S
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 213
Query: 360 TSIDMGVGCIFHE-MSSG-RPLFPGS------TIEDELRLICSILGPPP 400
S G + E MS G RP + S IE+ RL PPP
Sbjct: 214 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------PPP 256
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 72 PLTRSSRRQSLSEIGFGRIESYFKLDK-LGQGTYATVFKGKSRLTDN---LVALKEIKLE 127
P T Q++ E S K++K +G G + V G+ ++ VA+K +K
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG 68
Query: 128 HEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLE 172
+ + + E S++ + H NI+ L ++ K + ++ EY+E
Sbjct: 69 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYME 113
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 252
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 39/240 (16%)
Query: 193 GTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G +L VA+K +K + E + E S++ + H N++ L ++
Sbjct: 18 GEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV 77
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQL---LRGLA----YCHSRRIL 302
+ ++ E++E + L N+ + + QL LRG+A Y +
Sbjct: 78 TKSTPVMIITEFMENG------SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 303 HRDLKPQNLLINERGELKLADFGLAR----AKSVPTKT--FSNEVVTLWYRPPDVLLGST 356
HR L +N+L+N K++DFGL+R S PT T ++ W P +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY--R 189
Query: 357 EYSTSIDM-GVGCIFHE-MSSG-RPLFPGS------TIEDELRLICSILGPPPDELKSKL 407
+++++ D+ G + E MS G RP + + IE + RL PPP + S L
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL------PPPMDCPSAL 243
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 99 LGQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G + V G +L VA+K +K + E + E S++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 156 DIIHTEKCLTLVFEYLE 172
++ + ++ E++E
Sbjct: 75 GVVTKSTPVMIITEFME 91
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 193 GTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDII 249
G + V G+ ++ VA+K +K + + + E S++ + H NI+ L ++
Sbjct: 19 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV 78
Query: 250 HTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLL-------RGLAYCHSRRIL 302
K + ++ EY+E L N+ + + QL+ G+ Y +
Sbjct: 79 TKCKPVMIITEYMENG------SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 303 HRDLKPQNLLINERGELKLADFGLARA-KSVPTKTFSNEV--VTLWYRPPDVLLGSTEYS 359
HRDL +N+L+N K++DFG++R + P ++ + + + P+ + S
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 360 TSIDMGVGCIFHE-MSSG-RPLFPGS------TIEDELRLICSILGPPP 400
S G + E MS G RP + S IE+ RL PPP
Sbjct: 193 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------PPP 235
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 92 SYFKLDK-LGQGTYATVFKGKSRLTDN---LVALKEIKLEHEEGAPCTAIREVSLLRELR 147
S K++K +G G + V G+ ++ VA+K +K + + + E S++ +
Sbjct: 8 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD 67
Query: 148 HANIVTLHDIIHTEKCLTLVFEYLE 172
H NI+ L ++ K + ++ EY+E
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYME 92
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 254
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 157 IIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIK 216
++ TEK + +EY E+ + ++ L + +G++ V + + + T A+K+++
Sbjct: 75 VLLTEKLKPVDYEYREE-----VHWATHQLRLG--RGSFGEVHRMEDKQTGFQCAVKKVR 127
Query: 217 LEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNI 276
LE E+ L IV L+ + + + E LE +
Sbjct: 128 LE------VFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC 181
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERG-ELKLADFGLAR------- 328
L + +L Q L GL Y HSRRILH D+K N+L++ G L DFG A
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 329 AKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGC--IFHEMSSGRP 378
KS+ T + T + P+V+LG + +D+ C + H ++ P
Sbjct: 242 GKSLLTGDYIPGTET--HMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 245
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 262
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA--IREVSLLRELRHANIVTLHDIIH 250
G + V G L + VA+K I+ EGA I E ++ +L H +V L+ +
Sbjct: 19 GQFGLVHLGY-WLNKDKVAIKTIR----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 251 TEKCLTLVFEYLEKD-LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQ 309
+ + LV E++E L Y+ + + + + G+AY ++HRDL +
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 133
Query: 310 NLLINERGELKLADFGLAR 328
N L+ E +K++DFG+ R
Sbjct: 134 NCLVGENQVIKVSDFGMTR 152
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSV 332
+ L++ ++ + FQ+ +G+ + SR+ +HRDL +N+L++E+ +K+ DFGLAR K
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 333 PTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS-GRPLFPGSTIEDEL 389
+ + L + P+ + S G + E+ S G +PG I++E
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN--IVTLHDIIH 250
G + + GK+ T+ VA IKLE + E ++L A + ++
Sbjct: 11 GNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYFGP 67
Query: 251 TEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQN 310
K +V E L L+ D C ++ V + QLL + Y HS+ +++RD+KP+N
Sbjct: 68 XGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPEN 127
Query: 311 LLINERGELK-----LADFGLAR 328
LI +G K + DFGLA+
Sbjct: 128 FLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH- 250
+G A VF+G+ + T +L A+K +RE +L++L H NIV L I
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78
Query: 251 -TEKCLTLVFEYLE-KDLKRYMDDCSNILSM--NNVKLFLFQLLRGLAYCHSRRILHRDL 306
T + L+ E+ L +++ SN + + + L ++ G+ + I+HR++
Sbjct: 79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNI 138
Query: 307 KPQNLL--INERGE--LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST------ 356
KP N++ I E G+ KL DFG AR + F + T Y PD+ +
Sbjct: 139 KPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMYERAVLRKDHQ 197
Query: 357 -EYSTSIDM-GVGCIFHEMSSG 376
+Y ++D+ +G F+ ++G
Sbjct: 198 KKYGATVDLWSIGVTFYHAATG 219
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LGQG A VF+G+ + T +L A+K +RE +L++L H NIV L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 157 I 157
I
Sbjct: 75 I 75
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN-IVTLHDIIHT 251
G + + GK+ T+ VA IKLE + E ++L + I ++
Sbjct: 20 GNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC 76
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
K +V E L L+ D C S+ V + QL+ + Y HS+ +++RD+KP+N
Sbjct: 77 GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENF 136
Query: 312 LINERGE-----LKLADFGLAR 328
LI G + + DFGLA+
Sbjct: 137 LIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 277 LSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AKSVPT 334
++M ++ + FQ+ RG+ + SR+ +HRDL +N+L++E +K+ DFGLAR K+
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 335 KTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSS-GRPLFPGSTIEDELRLI 392
+ + L + P+ + YST D+ G + E+ S G +PG ++++
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF--- 311
Query: 393 CSIL 396
CS L
Sbjct: 312 CSRL 315
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 242 IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNV-----KLFLFQLLRGLAYC 296
+V L +K L +V EY+ D N++S +V K + +++ L
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGG------DLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLL-- 353
HS ++HRD+KP N+L+++ G LKLADFG + V T Y P+VL
Sbjct: 191 HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 354 -GSTEYSTSID-MGVGCIFHEMSSG-RPLFPGSTI 385
G Y D VG EM G P + S +
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLR-ELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + EG R ++LR L+H N+V L ++ ++ L+++F Y DL
Sbjct: 59 VAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 117
Query: 268 RYM------------DDCSNILSMNNVKLFLF---QLLRGLAYCHSRRILHRDLKPQNLL 312
++ DD + S F+ Q+ G+ Y S ++H+DL +N+L
Sbjct: 118 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL 177
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTL-WYRPPDVLLGSTEYSTSIDMGVGCI 369
+ ++ +K++D GL R K N ++ + W P ++ G + I G +
Sbjct: 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDI-WSYGVV 236
Query: 370 FHEM-SSGRPLFPGSTIEDELRLI 392
E+ S G + G + +D + +I
Sbjct: 237 LWEVFSYGLQPYCGYSNQDVVEMI 260
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 69 IDAPLTRSSRRQSLSEIGFGRIESYFKLDKLGQGTYATVFKG-----KSRLTDNLVALKE 123
++ PL ++ L EI + +++LG+ + V+KG VA+K
Sbjct: 7 MEMPLINQHKQAKLKEISLSAVRF---MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT 63
Query: 124 IKLEHEEGAPCTAIREVSLLR-ELRHANIVTLHDIIHTEKCLTLVFEY 170
+K + EG R ++LR L+H N+V L ++ ++ L+++F Y
Sbjct: 64 LK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCTAIREV-SLLRELRHANIVTLHDII 249
+G + V K + D + A+K + K E + A RE +L I TLH
Sbjct: 84 RGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143
Query: 250 HTEKCLTLVFEY-LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
+ L LV +Y + DL + + L + +L +++ + H +HRD+KP
Sbjct: 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKP 203
Query: 309 QNLLINERGELKLADFGLA-RAKSVPTKTFSNEVVTLWYRPPDVLL----GSTEYSTSID 363
N+L++ G ++LADFG + T S V T Y P++L G Y D
Sbjct: 204 DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD 263
Query: 364 -MGVGCIFHEMSSGR-PLFPGSTIE 386
+G +EM G P + S +E
Sbjct: 264 WWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIH- 250
+G A VF+G+ + T +L A+K +RE +L++L H NIV L I
Sbjct: 19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78
Query: 251 -TEKCLTLVFEYLE-KDLKRYMDDCSNILSM--NNVKLFLFQLLRGLAYCHSRRILHRDL 306
T + L+ E+ L +++ SN + + + L ++ G+ + I+HR++
Sbjct: 79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNI 138
Query: 307 KPQNLL--INERGE--LKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGST------ 356
KP N++ I E G+ KL DFG AR + F T Y PD+ +
Sbjct: 139 KPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYERAVLRKDHQ 197
Query: 357 -EYSTSIDM-GVGCIFHEMSSG 376
+Y ++D+ +G F+ ++G
Sbjct: 198 KKYGATVDLWSIGVTFYHAATG 219
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 97 DKLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 156
D LGQG A VF+G+ + T +L A+K +RE +L++L H NIV L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 157 I 157
I
Sbjct: 75 I 75
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLR-ELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
VA+K +K + EG R ++LR L+H N+V L ++ ++ L+++F Y DL
Sbjct: 42 VAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 100
Query: 268 RYM------------DDCSNILSMNNVKLFLF---QLLRGLAYCHSRRILHRDLKPQNLL 312
++ DD + S F+ Q+ G+ Y S ++H+DL +N+L
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL 160
Query: 313 INERGELKLADFGLARAKSVPT--KTFSNEVVTL-WYRPPDVLLGSTEYSTSIDMGVGCI 369
+ ++ +K++D GL R K N ++ + W P ++ G + I G +
Sbjct: 161 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDI-WSYGVV 219
Query: 370 FHEM-SSGRPLFPGSTIEDELRLI 392
E+ S G + G + +D + +I
Sbjct: 220 LWEVFSYGLQPYCGYSNQDVVEMI 243
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 96 LDKLGQGTYATVFKG-----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLR-ELRHA 149
+++LG+ + V+KG VA+K +K + EG R ++LR L+H
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHP 72
Query: 150 NIVTLHDIIHTEKCLTLVFEY 170
N+V L ++ ++ L+++F Y
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSY 93
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLL----RELRHANIVTLHDI 248
G+Y VFK +S+ L A+K P R+++ + + +H V L
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQA 125
Query: 249 IHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
L L E L+++ + L V +L L LA+ HS+ ++H D+KP
Sbjct: 126 WEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKP 185
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM 364
N+ + RG KL DFGL E Y P++L GS Y T+ D+
Sbjct: 186 ANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQGS--YGTAADV 238
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 75 RSSRRQSLSEIGF--GRIESYF-----KLDKLGQGTYATVFKGKSRLTDNLVALK 122
R ++L G+ R ES+F +L +LG G+Y VFK +S+ L A+K
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK 88
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 12/229 (5%)
Query: 168 FEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCT 226
F L K+++ + +D I + +G + V K + T+ + A+K + K E + A
Sbjct: 62 FTQLVKEMQLHREDFEIIKVIG--RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 227 AIREV-SLLRELRHANIVTLHDIIHTEKCLTLVFEY-LEKDLKRYMDDCSNILSMNNVKL 284
RE +L I LH E L LV +Y + DL + + L + +
Sbjct: 120 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 179
Query: 285 FLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG-LARAKSVPTKTFSNEVVT 343
++ +++ + H +HRD+KP N+L++ G ++LADFG + T S V T
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
Query: 344 LWYRPPDVLL----GSTEYSTSID-MGVGCIFHEMSSGR-PLFPGSTIE 386
Y P++L G +Y D +G +EM G P + S +E
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 180 DDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIK--LEHEEGAPCTAIREVSLLREL 237
DD I+ + +G Y V K + + ++A+K I+ + +E ++S+ R +
Sbjct: 7 DDLEPIMELG--RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-RTV 63
Query: 238 RHANIVTLHDIIHTEK----CLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGL 293
VT + + E C+ L+ L+K K+ +D I + + +++ L
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKAL 122
Query: 294 AYCHSR-RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVL 352
+ HS+ ++HRD+KP N+LIN G++K+ DFG++ V + Y P+ +
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDIDAGCKPYMAPERI 181
Query: 353 ---LGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIEDELRLICSILGPPPDELKSKLE 408
L YS D+ +G E++ R FP + G P +LK +E
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQLKQVVE 228
Query: 409 FCITPVYPSESKLQLLAPEQMDSDALDLVQKFLMYDAKQRISAANAMRHPYFN 461
E QL A ++ ++ +D + L ++K+R + M+HP+F
Sbjct: 229 ---------EPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 12/229 (5%)
Query: 168 FEYLEKDLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEI-KLEHEEGAPCT 226
F L K+++ + +D I + +G + V K + T+ + A+K + K E + A
Sbjct: 78 FTQLVKEMQLHREDFEIIKVIG--RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 227 AIREV-SLLRELRHANIVTLHDIIHTEKCLTLVFEY-LEKDLKRYMDDCSNILSMNNVKL 284
RE +L I LH E L LV +Y + DL + + L + +
Sbjct: 136 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 195
Query: 285 FLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG-LARAKSVPTKTFSNEVVT 343
++ +++ + H +HRD+KP N+L++ G ++LADFG + T S V T
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
Query: 344 LWYRPPDVLL----GSTEYSTSID-MGVGCIFHEMSSGR-PLFPGSTIE 386
Y P++L G +Y D +G +EM G P + S +E
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 209 LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLK 267
LVA+K +K + + A RE LL L+H +IV + + L +VFEY++ DL
Sbjct: 45 LVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 268 RYM------------DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINE 315
+++ + L+ + + Q+ G+ Y S+ +HRDL +N L+ E
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
Query: 316 RGELKLADFGLAR 328
+K+ DFG++R
Sbjct: 164 NLLVKIGDFGMSR 176
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 98 KLGQGTYATVFKGKS-----RLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+LG+G + VF + LVA+K +K + + A RE LL L+H +IV
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIV 78
Query: 153 TLHDIIHTEKCLTLVFEYLEK-DLKRYM 179
+ + L +VFEY++ DL +++
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 207 DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-D 265
D VA+K +K + E + E S++ + H NI+ L ++ + +V EY+E
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ ++ + L + G+ Y +HRDL +N+L++ K++DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 326 LAR 328
L+R
Sbjct: 197 LSR 199
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 99 LGQGTYATVFKGKSRLT---DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G V G+ R+ D VA+K +K + E + E S++ + H NI+ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 156 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTD 207
++ + +V EY+E L ++ ++ + G V G L+D
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 207 DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-D 265
D VA+K +K + E + E S++ + H NI+ L ++ + +V EY+E
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 266 LKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
L ++ ++ + L + G+ Y +HRDL +N+L++ K++DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 326 LAR 328
L+R
Sbjct: 197 LSR 199
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 99 LGQGTYATVFKGKSRLT---DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 155
+G G V G+ R+ D VA+K +K + E + E S++ + H NI+ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 156 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNVKGTYATVFKGKSRLTD 207
++ + +V EY+E L ++ ++ + G V G L+D
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 242 IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNV-----KLFLFQLLRGLAYC 296
+V L ++ L +V EY+ D N++S +V + + +++ L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG------DLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLL-- 353
HS +HRD+KP N+L+++ G LKLADFG + + V T Y P+VL
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 354 -GSTEYSTSID-MGVGCIFHEMSSG-RPLFPGSTI 385
G Y D VG +EM G P + S +
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 242 IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNV-----KLFLFQLLRGLAYC 296
+V L ++ L +V EY+ D N++S +V + + +++ L
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGG------DLVNLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLL-- 353
HS +HRD+KP N+L+++ G LKLADFG + + V T Y P+VL
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244
Query: 354 -GSTEYSTSID-MGVGCIFHEMSSG-RPLFPGSTI 385
G Y D VG +EM G P + S +
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKE----IKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
+G + V+KG + + VA+K+ + + EE +E+ ++ + +H N+V L
Sbjct: 41 EGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEE-LKQQFDQEIKVMAKCQHENLVELLG 97
Query: 248 IIHTEKCLTLVFEYLEKD--LKRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
L LV+ Y+ L R D + LS + G+ + H +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 305 DLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
D+K N+L++E K++DFGLARA K T S V T Y P+ L G + I
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDI 217
Query: 363 DMGVGCIFHEMSSGRP 378
G + E+ +G P
Sbjct: 218 -YSFGVVLLEIITGLP 232
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 242 IVTLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNV-----KLFLFQLLRGLAYC 296
+V L ++ L +V EY+ D N++S +V + + +++ L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG------DLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVV-TLWYRPPDVLL-- 353
HS +HRD+KP N+L+++ G LKLADFG + + V T Y P+VL
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 354 -GSTEYSTSID-MGVGCIFHEMSSG-RPLFPGSTI 385
G Y D VG +EM G P + S +
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--------REVSLLRELRHANIV 243
KG + V KG+ ++VA+K + L EG T + REV ++ L H NIV
Sbjct: 29 KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE--TEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 244 TLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR--I 301
L+ ++H + + F R +D I ++L L + G+ Y ++ I
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML-DIALGIEYMQNQNPPI 145
Query: 302 LHRDLKPQNLLINERGE-----LKLADFGLAR 328
+HRDL+ N+ + E K+ADFGL++
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--------REVSLLRELRHA 149
++G+G + V KG+ ++VA+K + L EG T + REV ++ L H
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE--TEMIEKFQEFQREVFIMSNLNHP 83
Query: 150 NIVTLHDIIHTEKCLTLVF 168
NIV L+ ++H + + F
Sbjct: 84 NIVKLYGLMHNPPRMVMEF 102
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN-IVTLHDIIHT 251
G + + GK+ T+ VA IKLE + E ++L + I ++
Sbjct: 41 GNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC 97
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
K +V E L L+ D C S+ V + QL+ + Y HS+ +++RD+KP+N
Sbjct: 98 GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENF 157
Query: 312 LINERGE-----LKLADFGLAR 328
LI G + + DF LA+
Sbjct: 158 LIGRPGNKTQQVIHIIDFALAK 179
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHAN-IVTLHDIIHT 251
G + + GK+ T+ VA IKLE + E ++L + I ++
Sbjct: 20 GNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC 76
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
K +V E L L+ D C S+ V + QL+ + Y HS+ +++RD+KP+N
Sbjct: 77 GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENF 136
Query: 312 LINERGE-----LKLADFGLAR 328
LI G + + DF LA+
Sbjct: 137 LIGRPGNKTQQVIHIIDFALAK 158
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 229 REVSLLRELRHANIVTLHDIIHTEKCLTLVFEYLEK-DLKRYMD---------------D 272
RE LL L+H +IV + + L +VFEY++ DL +++
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 273 CSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLAR--AK 330
L ++ + Q+ G+ Y S+ +HRDL +N L+ +K+ DFG++R
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
Query: 331 SVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSIDMGVGCIFHEMSS--GRPLFPGSTIE 386
+ + + ++ + + PP+ ++ + S G I E+ + +P F S E
Sbjct: 186 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 243
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 98 KLGQGTYATVFKGK----SRLTDN-LVALKEIKLEHEEGAPCTAIREVSLLRELRHANIV 152
+LG+G + VF + S D LVA+K +K + A RE LL L+H +IV
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK-DPTLAARKDFQREAELLTNLQHEHIV 80
Query: 153 TLHDIIHTEKCLTLVFEYLEK-DLKRYM 179
+ + L +VFEY++ DL +++
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDIIHTE 252
G++ ++ G + T+ VA IKLE+ + + E + R L+ + E
Sbjct: 18 GSFGEIYLGTNIQTNEEVA---IKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVE 74
Query: 253 KCLT-LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
LV + L L+ + CS LS+ V + Q++ + + HS+ LHRD+KP N
Sbjct: 75 GDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 134
Query: 312 LIN---ERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTEYST 360
L+ ++ + DFGLA+ K T T + + YR L G+ Y++
Sbjct: 135 LMGLGRRANQVYIIDFGLAK-KYRDTSTHQH----IPYRENKNLTGTARYAS 181
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALK-EIKLEHEEGAPCTAIR---EVSLLRELRHANIVTLHDI 248
G + TV+KG V + IK+ +E P + E ++ + H ++V L +
Sbjct: 49 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 108
Query: 249 I--HTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T + +T + + L + + + D+ + L +N + Q+ +G+ Y RR++HR
Sbjct: 109 CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGMMYLEERRLVHR 164
Query: 305 DLKPQNLLINERGELKLADFGLAR 328
DL +N+L+ +K+ DFGLAR
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLAR 188
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 381 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 440
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 441 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 498
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW 345
+N+L+ + K++DFGL++A + + W
Sbjct: 499 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 230 EVSLLRELRHA-------NIVTLHDIIHTEKCLTLVFEY-LEKDLKRYMDDCSNILSMNN 281
EVS RE R I LH E L LV EY + DL + +
Sbjct: 104 EVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM 163
Query: 282 VKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFG 325
+ +L +++ + H +HRD+KP N+L++ G ++LADFG
Sbjct: 164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 380 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 439
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 440 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 497
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW 345
+N+L+ + K++DFGL++A + + W
Sbjct: 498 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALK-EIKLEHEEGAPCTAIR---EVSLLRELRHANIVTLHDI 248
G + TV+KG V + IK+ +E P + E ++ + H ++V L +
Sbjct: 26 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 85
Query: 249 I--HTEKCLTLVFEY--LEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T + +T + + L + + + D+ + L +N + Q+ +G+ Y RR++HR
Sbjct: 86 CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGMMYLEERRLVHR 141
Query: 305 DLKPQNLLINERGELKLADFGLAR 328
DL +N+L+ +K+ DFGLAR
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLAR 165
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 170 YLEKDLKRY---MDDCSNILSMNNVKGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCT 226
YL +RY ++D N+ M + GT V+K + R T +++A+K+++ +
Sbjct: 12 YLTIGGQRYQAEINDLENLGEMGS--GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKR 69
Query: 227 AIREVSLLRELRHANIVTLHDIIHTEKCL------TLVFEYLE------KDLKRYMDDCS 274
+ ++ + ++ HD + +C T VF +E + LK+ M
Sbjct: 70 ILMDLDV--------VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPI 121
Query: 275 NILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPT 334
+ + + + + L L H ++HRD+KP N+L++ERG++KL DFG++ + V
Sbjct: 122 PERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGIS-GRLVDD 178
Query: 335 KTFSNEVVTLWYR------PPDVLLGSTEYSTSIDM-GVGCIFHEMSSGRPLFPGSTIED 387
K Y PPD +Y D+ +G E+++G+ FP +
Sbjct: 179 KAKDRSAGCAAYMAPERIDPPDPT--KPDYDIRADVWSLGISLVELATGQ--FPYKNCKT 234
Query: 388 ELRLICSILGPPPDELKSKLEF 409
+ ++ +L P L + F
Sbjct: 235 DFEVLTKVLQEEPPLLPGHMGF 256
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 192 KGTYATVFKGKSRLTDNLVALKE----IKLEHEEGAPCTAIREVSLLRELRHANIVTLHD 247
+G + V+KG + + VA+K+ + + EE +E+ ++ + +H N+V L
Sbjct: 41 EGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEE-LKQQFDQEIKVMAKCQHENLVELLG 97
Query: 248 IIHTEKCLTLVFEYLEKD--LKRYMD-DCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
L LV+ Y+ L R D + LS + G+ + H +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 305 DLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPPDVLLGSTEYSTSI 362
D+K N+L++E K++DFGLARA K T V T Y P+ L G + I
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDI 217
Query: 363 DMGVGCIFHEMSSGRP 378
G + E+ +G P
Sbjct: 218 -YSFGVVLLEIITGLP 232
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 192 KGTYATVFKGKSRLT-----DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 246
+G++ V++G ++ + VA+K + + E S+++E ++V L
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 247 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNV-------KLFLF--QLLRGLAYC 296
++ + ++ E + + DLK Y+ ++ N V K+ ++ G+AY
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR 328
++ + +HRDL +N ++ E +K+ DFG+ R
Sbjct: 155 NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 87 CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 142
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 143 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--------REVSLLRELRHANIV 243
KG + V KG+ ++VA+K + L EG T + REV ++ L H NIV
Sbjct: 29 KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE--TEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 244 TLHDIIHTEKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRR--I 301
L+ ++H + + F R +D I ++L L + G+ Y ++ I
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML-DIALGIEYMQNQNPPI 145
Query: 302 LHRDLKPQNLLINERGE-----LKLADFGLAR 328
+HRDL+ N+ + E K+ADFG ++
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 98 KLGQGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAI--------REVSLLRELRHA 149
++G+G + V KG+ ++VA+K + L EG T + REV ++ L H
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE--TEMIEKFQEFQREVFIMSNLNHP 83
Query: 150 NIVTLHDIIHTEKCLTLVF 168
NIV L+ ++H + + F
Sbjct: 84 NIVKLYGLMHNPPRMVMEF 102
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 23/237 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 97
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 98 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 155
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEV----VTLWYRPPDVLLGSTEYSTSIDM 364
+N+L+ + K++DFGL++A + + WY P + ++S+ D+
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CINYYKFSSKSDV 213
Query: 365 -GVGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 268
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 23/237 (9%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 97
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 98 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 155
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEV----VTLWYRPPDVLLGSTEYSTSIDM 364
+N+L+ + K++DFGL++A + + WY P + ++S+ D+
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CINYYKFSSKSDV 213
Query: 365 -GVGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 268
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHA-NIVTLHDIIHT 251
G + + GK+ T+ VA IKLE + E ++L + ++
Sbjct: 15 GNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPX 71
Query: 252 EKCLTLVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNL 311
K +V E L L+ D C ++ V + QL+ + Y H++ +++RD+KP+N
Sbjct: 72 GKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENF 131
Query: 312 LINERG-----ELKLADFGLAR 328
L+ G + + DFGLA+
Sbjct: 132 LVGRPGTKRQHAIHIIDFGLAK 153
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 36 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 95
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 96 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 153
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 154 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 213
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 214 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 86 -----CLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 136
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 81
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 82 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 139
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 252
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 192 KGTYATVFKGKSRLT-----DNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLH 246
+G++ V++G ++ + VA+K + + E S+++E ++V L
Sbjct: 25 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 84
Query: 247 DIIHTEKCLTLVFEYLEK-DLKRYMDDCSNILSMNNV-------KLFLF--QLLRGLAYC 296
++ + ++ E + + DLK Y+ ++ N V K+ ++ G+AY
Sbjct: 85 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 144
Query: 297 HSRRILHRDLKPQNLLINERGELKLADFGLAR 328
++ + +HRDL +N ++ E +K+ DFG+ R
Sbjct: 145 NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 90 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 145
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 146 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 87
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 88 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 145
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 21/250 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 77
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 78 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 135
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
G + E S G+ + G + +E R+ C P E+ + C T Y
Sbjct: 196 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT--YDV 251
Query: 418 ESKLQLLAPE 427
E++ A E
Sbjct: 252 ENRPGFAAVE 261
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 93 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 148
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 88 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 143
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 144 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 21/250 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 16 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 75
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 76 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 133
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 134 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 193
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCITPVYPS 417
G + E S G+ + G + +E R+ C P E+ + C T Y
Sbjct: 194 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT--YDV 249
Query: 418 ESKLQLLAPE 427
E++ A E
Sbjct: 250 ENRPGFAAVE 259
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 87 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 142
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 143 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 89 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 144
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 145 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 193 GTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTA---IREVSLLRELRHANIVTLHDII 249
G + TV KG ++ + + L++E P + E +++++L + IV + I
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 81
Query: 250 HTEKCLTLVFEYLE-KDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKP 308
E + LV E E L +Y+ ++ N ++L + Q+ G+ Y +HRDL
Sbjct: 82 EAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNFVHRDLAA 139
Query: 309 QNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLW---YRPPDVLLGSTEYSTSIDMG 365
+N+L+ + K++DFGL++A + + W + P+ + S S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 366 VGCIFHE-MSSGRPLFPG-------STIEDELRLICSILGPPPDELKSKLEFCIT 412
G + E S G+ + G + +E R+ C P E+ + C T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--AGCPREMYDLMNLCWT 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 249 IHTEKCLTLV----FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHR 304
T ++ F L ++ + D+ + +N + Q+ +G+ Y RR++HR
Sbjct: 86 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDRRLVHR 141
Query: 305 DLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
DL +N+L+ +K+ DFGLA+ K + E
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 51 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 110
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 111 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 161
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 210 VALKEIKLEHEEGAPCTAIREVSLLREL-RHANIVTLHDIIHTEKCLTLVFEYL-EKDLK 267
VA+K +K + + + E+ ++ +L H NIV L + L+FEY DL
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 268 RYM----------------------DDCSNILSMNNVKLFLFQLLRGLAYCHSRRILHRD 305
Y+ ++ N+L+ ++ F +Q+ +G+ + + +HRD
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 197
Query: 306 LKPQNLLINERGELKLADFGLAR 328
L +N+L+ +K+ DFGLAR
Sbjct: 198 LAARNVLVTHGKVVKICDFGLAR 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 91
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 92 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 142
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 89 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 139
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 86 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 136
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 93 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 143
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 89 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 139
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 86 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 136
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 88 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 138
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 93 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 143
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 192 KGTYATVFKGKSRLTDNLVALKEIKLEHEEGAPCTAIREVSL-LRELRHANIVTLHDIIH 250
+G Y +V K + + ++A+K I+ +E + ++ + +R IV + +
Sbjct: 32 RGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF 91
Query: 251 TEK----CLTLV---FEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSRRILH 303
E C+ L+ F+ K + +DD + + L + L L + +I+H
Sbjct: 92 REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK--ENLKIIH 149
Query: 304 RDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNEVVTLWYRPPDVLLGSTE---YST 360
RD+KP N+L++ G +KL DFG++ + V + + + Y P+ + S Y
Sbjct: 150 RDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 361 SIDM-GVGCIFHEMSSGRPLFP-GSTIEDELRLICSILGPPP 400
D+ +G +E+++GR +P +++ D+L + + G PP
Sbjct: 209 RSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--VKGDPP 248
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 185 ILSMNNVK-------GTYATVFKGKSRLTDNL---VALKEIKLEHEEGAPCTAIREVSLL 234
+L N++K G + V K + + D L A+K +K + E+ +L
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 235 REL-RHANIVTLHDIIHTEKCLTLVFEY---------------LEKDLKRYM-DDCSNIL 277
+L H NI+ L L L EY LE D + + ++ L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 278 SMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTF 337
S + F + RG+ Y ++ +HRDL +N+L+ E K+ADFGL+R + V K
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 338 SNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSS 375
+ W L + Y+T+ D+ G + E+ S
Sbjct: 190 MGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 274 SNILSMNNVKLFLFQLLRGLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARAKSVP 333
++ LS + F + RG+ Y ++ +HRDL +N+L+ E K+ADFGL+R + V
Sbjct: 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 195
Query: 334 TKTFSNEVVTLWYRPPDVLLGSTEYSTSIDM-GVGCIFHEMSS 375
K + W L + Y+T+ D+ G + E+ S
Sbjct: 196 VKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 292 GLAYCHSRRILHRDLKPQNLLINERGELKLADFGLARA--KSVPTKTFSNEVVTLWYRPP 349
G+ + H +HRD+K N+L++E K++DFGLARA K S V T Y P
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 350 DVLLGSTEYSTSIDMGVGCIFHEMSSGRP 378
+ L G + I G + E+ +G P
Sbjct: 196 EALRGEITPKSDI-YSFGVVLLEIITGLP 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 193 GTYATVFKG----KSRLTDNLVALKEIKLEHEEGAPCTAIREVSLLRELRHANIVTLHDI 248
G + TV+KG + VA+KE++ A + E ++ + + ++ L I
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 249 IHTEKCLT---------LVFEYLEKDLKRYMDDCSNILSMNNVKLFLFQLLRGLAYCHSR 299
CLT + F L ++ + D+ + +N + Q+ +G+ Y R
Sbjct: 89 -----CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN----WCVQIAKGMNYLEDR 139
Query: 300 RILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTFSNE 340
R++HRDL +N+L+ +K+ DFGLA+ K + E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,915,963
Number of Sequences: 62578
Number of extensions: 620928
Number of successful extensions: 5286
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1661
Number of HSP's gapped (non-prelim): 1934
length of query: 516
length of database: 14,973,337
effective HSP length: 103
effective length of query: 413
effective length of database: 8,527,803
effective search space: 3521982639
effective search space used: 3521982639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)