Query psy12306
Match_columns 1643
No_of_seqs 720 out of 3665
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 15:40:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12306.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12306hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dxw_A Navrh, ION transport pr 100.0 5.1E-37 1.8E-41 348.7 13.0 224 899-1175 4-228 (229)
2 3rvy_A ION transport protein; 100.0 3.7E-33 1.3E-37 327.5 5.4 230 892-1177 15-246 (285)
3 4dxw_A Navrh, ION transport pr 100.0 2.8E-32 9.7E-37 309.7 0.5 202 567-861 3-227 (229)
4 3rvy_A ION transport protein; 99.9 4.4E-29 1.5E-33 292.8 0.8 205 562-863 16-245 (285)
5 4dck_A Sodium channel protein 99.9 1.3E-26 4.4E-31 242.0 10.7 150 1168-1331 1-151 (168)
6 2r9r_B Paddle chimera voltage 99.9 1.1E-24 3.8E-29 273.6 3.9 244 888-1176 156-434 (514)
7 2kav_A Sodium channel protein 99.9 8.3E-24 2.8E-28 212.2 7.1 110 1158-1274 14-124 (129)
8 4dck_A Sodium channel protein 99.8 3.8E-21 1.3E-25 200.9 1.5 90 1418-1509 1-149 (168)
9 4f4l_A ION transport protein; 99.8 4.1E-21 1.4E-25 191.8 -0.5 104 1044-1178 2-105 (112)
10 2kav_A Sodium channel protein 99.8 3.9E-20 1.3E-24 185.6 2.0 72 1408-1481 14-86 (129)
11 2r9r_B Paddle chimera voltage 99.8 1.1E-18 3.8E-23 219.3 10.8 209 246-472 161-394 (514)
12 4f4l_A ION transport protein; 99.7 1.5E-19 5.1E-24 180.6 -1.5 100 716-864 5-104 (112)
13 3beh_A MLL3241 protein; transm 99.7 1.7E-17 5.7E-22 200.6 6.8 211 905-1174 6-218 (355)
14 3g43_E Voltage-dependent L-typ 99.6 6.4E-17 2.2E-21 144.9 0.6 79 1248-1327 2-80 (81)
15 2be6_D Voltage-dependent L-typ 99.6 9.6E-17 3.3E-21 118.7 1.3 31 1482-1512 3-33 (37)
16 1ors_C Potassium channel; volt 99.5 6.5E-15 2.2E-19 151.8 9.3 128 255-413 1-130 (132)
17 1ors_C Potassium channel; volt 99.5 4E-15 1.4E-19 153.4 5.6 128 902-1049 1-130 (132)
18 3beh_A MLL3241 protein; transm 99.5 1.1E-14 3.7E-19 176.1 5.9 174 258-469 6-181 (355)
19 1orq_C Potassium channel; volt 99.5 1E-14 3.5E-19 164.6 3.5 217 901-1173 2-221 (223)
20 1orq_C Potassium channel; volt 99.4 1.8E-13 6.3E-18 154.3 8.4 182 253-469 1-185 (223)
21 2f3y_B Voltage-dependent L-typ 99.1 1.2E-11 4E-16 84.3 1.7 24 1489-1512 1-24 (26)
22 2kyh_A KVAP, voltage-gated pot 98.9 1.4E-09 4.9E-14 113.5 6.6 131 248-408 9-140 (147)
23 3g43_E Voltage-dependent L-typ 98.8 9.6E-10 3.3E-14 98.9 2.3 38 1460-1508 44-81 (81)
24 3dvk_B Voltage-dependent R-typ 98.8 8.8E-10 3E-14 74.4 1.2 22 1486-1507 2-23 (23)
25 2kyh_A KVAP, voltage-gated pot 98.8 1.2E-09 4.2E-14 114.1 1.5 127 895-1041 9-137 (147)
26 3dve_B Voltage-dependent N-typ 98.6 4E-09 1.4E-13 71.1 0.6 23 1486-1508 1-23 (23)
27 2be6_D Voltage-dependent L-typ 98.3 2.2E-07 7.5E-12 69.4 2.8 31 1302-1332 3-33 (37)
28 1qg9_A Protein (sodium channel 97.9 2E-06 7E-11 60.9 0.8 24 38-61 2-25 (26)
29 4dey_B Voltage-dependent L-typ 97.9 3.8E-06 1.3E-10 79.3 2.3 48 154-201 2-49 (106)
30 3bxl_B CAM, voltage-dependent 97.9 3.8E-06 1.3E-10 58.0 1.5 22 1489-1510 1-22 (26)
31 2lcm_A Voltage-dependent N-typ 97.7 1.3E-05 4.5E-10 58.4 1.9 27 642-668 2-28 (28)
32 4dex_B Voltage-dependent N-typ 97.4 6.4E-05 2.2E-09 71.6 2.4 45 155-199 2-46 (113)
33 2f3y_B Voltage-dependent L-typ 97.1 0.0002 6.8E-09 49.4 2.2 23 1309-1331 1-23 (26)
34 2a9h_A Voltage-gated potassium 96.9 0.00037 1.3E-08 73.4 3.3 93 348-471 14-106 (155)
35 3dvk_B Voltage-dependent R-typ 96.8 0.00049 1.7E-08 46.9 2.0 20 1307-1326 3-22 (23)
36 1qg9_A Protein (sodium channel 96.1 0.0005 1.7E-08 48.9 -1.5 24 588-611 2-25 (26)
37 3dve_B Voltage-dependent N-typ 96.0 0.00092 3.1E-08 45.5 -0.3 21 1307-1327 2-22 (23)
38 2ih3_C Voltage-gated potassium 95.9 0.0032 1.1E-07 63.5 3.0 80 377-471 4-83 (122)
39 2a9h_A Voltage-gated potassium 95.6 0.0069 2.4E-07 63.6 4.0 62 1084-1173 79-140 (155)
40 3bxl_B CAM, voltage-dependent 95.3 0.01 3.6E-07 41.3 2.7 22 1309-1330 1-22 (26)
41 2ih3_C Voltage-gated potassium 93.9 0.046 1.6E-06 55.0 4.7 29 1147-1175 91-119 (122)
42 1byy_A Protein (sodium channel 89.0 0.1 3.6E-06 44.2 0.9 48 855-902 1-53 (53)
43 2ktg_A Calmodulin, putative; e 80.0 5.4 0.00018 36.0 8.2 70 1179-1257 7-77 (85)
44 2lcm_A Voltage-dependent N-typ 79.8 0.43 1.5E-05 34.9 0.4 23 376-398 5-27 (28)
45 2joj_A Centrin protein; N-term 78.2 4.4 0.00015 35.8 6.9 68 1181-1256 2-69 (77)
46 1avs_A Troponin C; muscle cont 78.2 5.6 0.00019 36.5 7.8 70 1179-1257 13-83 (90)
47 2lv7_A Calcium-binding protein 77.8 3.6 0.00012 39.4 6.4 67 1179-1253 29-95 (100)
48 2kn2_A Calmodulin; S MAPK phos 76.9 12 0.00041 34.3 9.7 70 1181-1258 4-73 (92)
49 2l53_B CAM, voltage-gated sodi 75.4 2.4 8.2E-05 31.6 3.2 21 1308-1328 4-24 (31)
50 1fi6_A EH domain protein REPS1 75.2 8.1 0.00028 36.0 8.0 68 1180-1257 3-70 (92)
51 3i5g_C Myosin catalytic light 74.2 7.6 0.00026 40.2 8.3 67 1184-1257 83-150 (159)
52 1j7q_A CAVP, calcium vector pr 73.5 7.9 0.00027 35.1 7.4 70 1179-1257 7-79 (86)
53 2opo_A Polcalcin CHE A 3; calc 73.5 7.1 0.00024 35.3 7.0 68 1180-1257 5-73 (86)
54 2kxw_B Sodium channel protein 70.9 2.7 9.2E-05 30.4 2.5 20 1308-1327 4-23 (27)
55 1c07_A Protein (epidermal grow 68.1 12 0.00041 35.1 7.4 68 1180-1257 4-71 (95)
56 2k1e_A Water soluble analogue 67.0 7.3 0.00025 37.5 5.7 51 415-470 11-61 (103)
57 2b1u_A Calmodulin-like protein 66.1 18 0.00061 31.0 7.7 64 1184-1255 4-67 (71)
58 1tiz_A Calmodulin-related prot 65.3 12 0.0004 31.7 6.3 61 1188-1256 3-63 (67)
59 3vou_A ION transport 2 domain 61.9 5.8 0.0002 40.8 4.2 46 415-471 29-74 (148)
60 2q67_A Potassium channel prote 61.9 6.3 0.00022 38.8 4.2 44 417-471 28-71 (114)
61 4ds7_A Calmodulin, CAM; protei 61.8 18 0.00061 35.7 7.9 71 1179-1257 4-74 (147)
62 1iq3_A Ralbp1-interacting prot 61.7 11 0.00037 36.7 5.9 71 1179-1259 15-85 (110)
63 2d58_A Allograft inflammatory 61.4 18 0.00062 34.3 7.4 67 1182-1256 28-94 (107)
64 3eff_K Voltage-gated potassium 61.2 5.4 0.00019 40.6 3.8 57 410-471 6-62 (139)
65 3qrx_A Centrin; calcium-bindin 59.3 20 0.00067 36.6 7.8 72 1178-1257 20-91 (169)
66 1eh2_A EPS15; calcium binding, 59.2 22 0.00075 34.3 7.5 68 1180-1258 9-76 (106)
67 1yx7_A Calsensin, LAN3-6 antig 59.1 18 0.00061 32.2 6.6 69 1181-1253 2-72 (83)
68 2lmt_A Calmodulin-related prot 58.9 15 0.00053 36.9 6.8 70 1179-1256 3-72 (148)
69 2kgr_A Intersectin-1; structur 58.2 29 0.00097 33.6 8.3 68 1180-1257 8-75 (111)
70 1s6j_A CDPK, calcium-dependent 58.2 8 0.00027 35.0 4.1 66 1180-1253 17-82 (87)
71 1top_A Troponin C; contractIle 57.5 27 0.00092 35.1 8.4 71 1179-1257 13-83 (162)
72 3j04_B Myosin regulatory light 57.4 12 0.0004 37.1 5.5 64 1181-1256 2-65 (143)
73 2bl0_C Myosin regulatory light 56.3 20 0.00069 35.3 7.1 69 1182-1258 2-70 (142)
74 2obh_A Centrin-2; DNA repair c 56.0 28 0.00097 34.6 8.2 68 1182-1257 2-69 (143)
75 3nso_A Protein S100-A3; EF-han 55.8 20 0.00068 34.3 6.5 73 1184-1260 8-83 (101)
76 3e3r_A Calcyphosin, calcyphosi 55.1 18 0.00063 38.1 6.9 92 1185-1285 108-201 (204)
77 2pmy_A RAS and EF-hand domain- 54.8 13 0.00045 34.2 5.0 66 1180-1256 21-87 (91)
78 1cb1_A Calbindin D9K; calcium- 54.3 31 0.001 30.1 7.2 67 1183-1256 4-73 (78)
79 2lmt_A Calmodulin-related prot 54.0 16 0.00054 36.8 5.9 64 1186-1257 83-146 (148)
80 3rm1_A Protein S100-B; alpha-h 53.8 24 0.00082 32.7 6.7 73 1183-1260 6-82 (92)
81 1k9u_A Polcalcin PHL P 7; poll 53.6 22 0.00075 31.2 6.2 62 1187-1257 4-65 (78)
82 2lhi_A Calmodulin, serine/thre 53.0 10 0.00036 39.8 4.4 70 1178-1255 3-72 (176)
83 1c7v_A CAVP, calcium vector pr 52.9 15 0.0005 32.7 4.8 67 1183-1259 6-74 (81)
84 2kz2_A Calmodulin, CAM; TR2C, 52.3 28 0.00094 32.3 6.8 64 1184-1256 27-91 (94)
85 3fwb_A Cell division control p 52.1 30 0.001 34.7 7.7 71 1179-1257 16-86 (161)
86 1qx2_A Vitamin D-dependent cal 52.1 15 0.00053 31.9 4.8 67 1184-1257 3-72 (76)
87 1qjt_A EH1, epidermal growth f 51.8 24 0.00083 33.4 6.4 69 1183-1261 8-76 (99)
88 3u0k_A Rcamp; fluorescent prot 51.8 24 0.00082 42.6 7.6 71 1179-1257 295-365 (440)
89 4eto_A Protein S100-A4; calciu 51.3 20 0.00067 33.7 5.6 72 1183-1259 7-82 (93)
90 1dtl_A Cardiac troponin C; hel 51.2 29 0.00098 34.9 7.4 70 1179-1256 11-81 (161)
91 2ovk_C Myosin catalytic light 51.0 43 0.0015 33.6 8.7 68 1184-1258 83-151 (159)
92 3i5g_C Myosin catalytic light 50.5 27 0.00093 35.9 7.1 70 1179-1257 2-73 (159)
93 2f2o_A Calmodulin fused with c 50.4 30 0.001 35.6 7.5 70 1180-1257 5-74 (179)
94 2qac_A Myosin A tail domain in 50.0 38 0.0013 33.4 8.0 63 1184-1256 82-144 (146)
95 2jnf_A Troponin C; stretch act 49.9 29 0.00099 34.8 7.1 71 1179-1257 6-77 (158)
96 2jq6_A EH domain-containing pr 49.6 46 0.0016 33.8 8.4 68 1182-1260 47-114 (139)
97 3i5g_B Myosin regulatory light 49.5 26 0.0009 35.8 6.8 63 1185-1256 84-146 (153)
98 1j55_A S-100P protein; metal b 49.0 31 0.0011 32.3 6.6 71 1183-1257 6-79 (95)
99 3dtp_E RLC, myosin regulatory 49.0 30 0.001 36.6 7.4 67 1179-1257 50-116 (196)
100 5pal_A Parvalbumin; calcium-bi 48.6 39 0.0013 31.7 7.4 68 1183-1256 38-106 (109)
101 2mys_C Myosin; muscle protein, 48.0 36 0.0012 33.5 7.4 65 1183-1256 82-146 (149)
102 2ovk_C Myosin catalytic light 47.8 48 0.0017 33.2 8.5 69 1179-1256 2-72 (159)
103 1exr_A Calmodulin; high resolu 47.5 34 0.0012 34.1 7.1 70 1180-1257 4-73 (148)
104 3i5g_B Myosin regulatory light 47.4 11 0.00038 38.7 3.4 39 1179-1217 9-47 (153)
105 1w7j_B Myosin light chain 1; m 47.3 15 0.00052 36.6 4.4 70 1180-1257 4-75 (151)
106 2aao_A CDPK, calcium-dependent 47.0 30 0.001 35.0 6.8 69 1180-1256 21-89 (166)
107 1wdc_C Scallop myosin; calcium 46.9 21 0.00073 35.8 5.5 69 1180-1257 3-73 (156)
108 3fia_A Intersectin-1; EH 1 dom 46.4 36 0.0012 33.8 6.7 68 1179-1257 26-93 (121)
109 4ds7_A Calmodulin, CAM; protei 46.1 29 0.001 34.1 6.4 61 1186-1256 84-145 (147)
110 1wdc_C Scallop myosin; calcium 45.9 57 0.0019 32.5 8.6 68 1183-1257 81-149 (156)
111 2bl0_C Myosin regulatory light 45.6 37 0.0013 33.2 7.0 60 1184-1253 77-137 (142)
112 1wlz_A DJBP, CAP-binding prote 45.3 36 0.0012 31.8 6.6 64 1185-1256 23-86 (105)
113 2lnk_A Protein S100-A4; EF-han 45.2 34 0.0012 33.5 6.3 73 1183-1259 19-94 (113)
114 3ox6_A Calcium-binding protein 44.7 17 0.00058 36.1 4.3 71 1179-1257 4-74 (153)
115 3fwb_A Cell division control p 44.7 48 0.0016 33.1 7.9 66 1184-1257 94-159 (161)
116 2kax_A Protein S100-A5; EF-han 44.6 42 0.0014 31.0 6.7 67 1184-1257 8-77 (92)
117 3n22_A Protein S100-A2; EF-han 44.4 20 0.00068 34.1 4.4 73 1183-1260 8-84 (98)
118 3sjs_A URE3-BP sequence specif 44.2 36 0.0012 36.9 7.2 71 1179-1257 44-114 (220)
119 1ggw_A Protein (CDC4P); light 44.1 27 0.00092 34.2 5.7 60 1185-1256 4-63 (140)
120 1rwy_A Parvalbumin alpha; EF-h 43.9 46 0.0016 31.2 7.1 69 1183-1256 38-106 (109)
121 1wdc_B Scallop myosin; calcium 43.6 34 0.0012 34.3 6.5 67 1179-1257 11-77 (156)
122 3zwh_A Protein S100-A4; Ca-bin 43.4 33 0.0011 32.9 5.9 73 1183-1260 10-86 (104)
123 2bl0_B Myosin regulatory light 43.0 32 0.0011 33.7 6.1 58 1188-1256 7-64 (145)
124 2y5i_A S100Z, S100 calcium bin 42.5 40 0.0014 31.8 6.3 73 1183-1259 7-82 (99)
125 1m45_A MLC1P, myosin light cha 42.3 51 0.0017 32.5 7.5 65 1184-1256 81-145 (148)
126 2k1e_A Water soluble analogue 42.1 37 0.0013 32.5 6.0 29 1147-1175 70-98 (103)
127 2mys_B Myosin; muscle protein, 41.8 37 0.0013 34.4 6.5 67 1179-1257 18-85 (166)
128 1ufm_A COP9 complex subunit 4; 41.1 11 0.00036 35.1 1.8 50 1557-1607 12-61 (84)
129 1nya_A Calerythrin; EF-hand, m 41.0 27 0.00092 35.7 5.3 37 1181-1217 2-42 (176)
130 2ovk_B RLC, myosin regulatory 40.9 42 0.0014 33.4 6.7 64 1184-1257 83-147 (153)
131 1s6i_A CDPK, calcium-dependent 40.8 40 0.0014 35.5 6.7 70 1179-1256 3-72 (188)
132 1wy9_A Allograft inflammatory 40.0 57 0.0019 32.9 7.5 68 1182-1257 44-111 (147)
133 1w7j_B Myosin light chain 1; m 39.9 29 0.001 34.5 5.2 61 1186-1255 87-147 (151)
134 3j04_B Myosin regulatory light 39.8 45 0.0016 32.6 6.6 66 1184-1257 74-139 (143)
135 3k21_A PFCDPK3, calcium-depend 39.8 55 0.0019 34.4 7.6 67 1180-1256 46-113 (191)
136 2wcb_A Protein S100-A12; calci 39.0 29 0.00098 32.5 4.6 72 1183-1258 9-83 (95)
137 4h33_A LMO2059 protein; bilaye 39.0 15 0.00053 37.2 2.9 22 450-471 44-65 (137)
138 1ggw_A Protein (CDC4P); light 39.0 36 0.0012 33.3 5.7 65 1182-1256 72-137 (140)
139 3fs7_A Parvalbumin, thymic; ca 38.8 44 0.0015 31.3 6.1 67 1183-1254 39-105 (109)
140 1k8u_A S100A6, calcyclin, CACY 37.9 45 0.0016 29.9 5.8 70 1184-1258 8-79 (90)
141 1exr_A Calmodulin; high resolu 37.8 54 0.0018 32.5 6.9 62 1186-1256 83-145 (148)
142 1bu3_A Calcium-binding protein 37.4 62 0.0021 30.3 6.8 65 1184-1254 40-105 (109)
143 1pva_A Parvalbumin; calcium bi 37.3 52 0.0018 30.8 6.3 67 1183-1255 39-106 (110)
144 2pvb_A Protein (parvalbumin); 36.9 50 0.0017 30.9 6.1 66 1183-1254 38-104 (108)
145 1rro_A RAT oncomodulin; calciu 36.8 64 0.0022 30.1 6.9 66 1184-1254 39-104 (108)
146 3h4s_E KCBP interacting Ca2+-b 36.8 60 0.0021 32.1 6.9 68 1185-1260 39-107 (135)
147 3khe_A Calmodulin-like domain 36.6 32 0.0011 35.7 5.1 75 1181-1256 35-113 (191)
148 3nxa_A Protein S100-A16; S100 36.3 92 0.0032 29.4 7.8 74 1183-1260 8-85 (100)
149 2bl0_B Myosin regulatory light 36.3 80 0.0027 30.7 7.8 67 1183-1257 73-139 (145)
150 1uhk_A Aequorin 2, aequorin; E 36.2 41 0.0014 34.8 5.8 75 1180-1257 10-89 (191)
151 1xl4_A Inward rectifier potass 35.3 23 0.00079 40.9 3.9 45 420-469 58-102 (301)
152 2obh_A Centrin-2; DNA repair c 35.1 66 0.0023 31.8 7.0 60 1186-1254 79-139 (143)
153 3sjs_A URE3-BP sequence specif 35.1 63 0.0021 35.0 7.3 63 1186-1258 117-180 (220)
154 3qrx_A Centrin; calcium-bindin 34.4 56 0.0019 33.0 6.4 63 1186-1257 101-164 (169)
155 2mys_B Myosin; muscle protein, 34.0 89 0.003 31.4 7.9 65 1185-1257 94-158 (166)
156 2jjz_A Ionized calcium-binding 33.6 62 0.0021 32.7 6.5 68 1182-1257 46-113 (150)
157 3pm8_A PFCDPK2, calcium-depend 33.5 33 0.0011 36.4 4.6 69 1180-1256 51-119 (197)
158 1gjy_A Sorcin, CP-22, V19; cal 33.0 88 0.003 31.7 7.7 62 1186-1257 72-133 (167)
159 1p7b_A Integral membrane chann 32.7 26 0.00088 41.1 3.7 59 406-469 57-116 (333)
160 1k2h_A S100A1, S-100 protein, 32.4 41 0.0014 30.6 4.5 68 1183-1258 6-80 (93)
161 3mse_B Calcium-dependent prote 32.4 60 0.0021 33.6 6.4 65 1182-1256 35-99 (180)
162 1qv0_A Obelin, OBL; photoprote 32.2 38 0.0013 35.2 4.8 76 1179-1257 13-93 (195)
163 1qls_A S100C protein, calgizza 32.1 28 0.00096 32.2 3.3 70 1184-1257 11-83 (99)
164 2qks_A KIR3.1-prokaryotic KIR 32.0 24 0.00082 41.2 3.3 21 449-469 78-98 (321)
165 1s6j_A CDPK, calcium-dependent 31.8 16 0.00054 32.9 1.4 39 1430-1468 17-55 (87)
166 1xk4_C Calgranulin B; S100 fam 31.7 61 0.0021 31.3 5.8 72 1184-1258 10-84 (113)
167 1alv_A Calpain, S-camld; calci 31.7 40 0.0014 34.6 4.8 69 1184-1256 2-73 (173)
168 2mys_C Myosin; muscle protein, 31.1 28 0.00097 34.3 3.4 69 1180-1256 2-72 (149)
169 3ox6_A Calcium-binding protein 31.0 54 0.0018 32.2 5.5 62 1185-1255 87-150 (153)
170 1wdc_B Scallop myosin; calcium 30.9 1E+02 0.0035 30.6 7.7 64 1185-1257 86-149 (156)
171 3sg6_A Gcamp2, myosin light ch 30.5 1.5E+02 0.005 36.2 10.0 71 1179-1257 305-375 (450)
172 2hpk_A Photoprotein berovin; s 30.2 31 0.001 36.7 3.7 72 1179-1256 29-107 (208)
173 1k94_A Grancalcin; penta-EF-ha 29.5 93 0.0032 31.4 7.1 62 1186-1257 70-131 (165)
174 2i7a_A Calpain 13; calcium-dep 29.4 96 0.0033 32.3 7.3 64 1187-1257 77-141 (174)
175 1j7q_A CAVP, calcium vector pr 29.3 21 0.00071 32.1 1.8 37 1430-1466 8-44 (86)
176 2ovk_B RLC, myosin regulatory 29.2 29 0.00098 34.7 3.1 66 1178-1255 8-73 (153)
177 2sas_A Sarcoplasmic calcium-bi 29.0 40 0.0014 34.5 4.2 37 1180-1216 2-39 (185)
178 1jfj_A Ehcabp, calcium-binding 28.7 53 0.0018 31.4 4.8 58 1186-1255 75-132 (134)
179 2ccm_A Calexcitin; EF hand, ca 27.9 54 0.0019 34.0 5.1 75 1180-1257 6-91 (191)
180 1juo_A Sorcin; calcium-binding 27.9 1.3E+02 0.0043 31.6 8.0 62 1186-1257 103-164 (198)
181 3ll8_B Calcineurin subunit B t 27.5 38 0.0013 33.6 3.6 64 1182-1257 2-65 (155)
182 3ldc_A Calcium-gated potassium 27.3 26 0.00088 32.1 2.0 43 417-470 7-49 (82)
183 1m45_A MLC1P, myosin light cha 27.2 45 0.0015 32.9 4.1 64 1186-1257 4-68 (148)
184 3ouf_A Potassium channel prote 27.1 29 0.001 32.9 2.4 46 415-471 9-54 (97)
185 3akb_A Putative calcium bindin 26.5 55 0.0019 32.8 4.7 72 1185-1257 3-82 (166)
186 1xk4_A Calgranulin A; S100 fam 25.6 33 0.0011 31.6 2.5 66 1184-1258 8-77 (93)
187 2ktg_A Calmodulin, putative; e 25.3 24 0.00083 31.5 1.4 38 1429-1466 7-44 (85)
188 2joj_A Centrin protein; N-term 25.0 16 0.00054 32.0 0.1 37 1431-1467 2-38 (77)
189 1alv_A Calpain, S-camld; calci 24.9 1.1E+02 0.0038 31.1 6.8 63 1186-1257 77-139 (173)
190 3e3r_A Calcyphosin, calcyphosi 24.9 66 0.0022 33.7 5.1 67 1181-1255 32-98 (204)
191 2znd_A Programmed cell death p 24.7 1.6E+02 0.0053 29.9 7.9 64 1186-1257 74-137 (172)
192 2lhi_A Calmodulin, serine/thre 24.6 41 0.0014 35.2 3.3 40 1428-1467 3-42 (176)
193 4drw_A Protein S100-A10/annexi 24.5 72 0.0025 31.5 4.8 72 1183-1260 12-85 (121)
194 1jfj_A Ehcabp, calcium-binding 24.1 91 0.0031 29.6 5.6 61 1188-1256 2-62 (134)
195 2h2k_A Protein S100-A13; calci 23.8 95 0.0033 29.7 5.5 69 1183-1258 19-90 (106)
196 1q80_A SCP, sarcoplasmic calci 23.8 64 0.0022 32.7 4.6 71 1182-1257 2-80 (174)
197 3li6_A Calcium-binding protein 22.8 46 0.0016 27.8 2.7 29 1187-1215 37-65 (66)
198 1c07_A Protein (epidermal grow 22.7 25 0.00086 32.8 1.0 39 1426-1465 1-39 (95)
199 2d8n_A Recoverin; structural g 22.6 1.2E+02 0.0041 31.8 6.6 68 1187-1257 108-184 (207)
200 3mwu_A Calmodulin-domain prote 22.6 52 0.0018 40.3 4.2 75 1181-1256 326-407 (486)
201 2bec_A Calcineurin B homologou 22.3 1.4E+02 0.0048 31.2 7.1 68 1182-1256 110-181 (202)
202 1avs_A Troponin C; muscle cont 21.8 21 0.00071 32.5 0.2 38 1430-1467 14-51 (90)
203 1juo_A Sorcin; calcium-binding 21.7 66 0.0023 33.8 4.3 70 1183-1256 30-99 (198)
204 2b1u_A Calmodulin-like protein 21.6 52 0.0018 27.9 2.8 35 1434-1468 4-38 (71)
205 3eff_K Voltage-gated potassium 21.3 1.8E+02 0.0061 29.1 7.2 61 93-160 36-96 (139)
206 4h33_A LMO2059 protein; bilaye 20.8 25 0.00085 35.6 0.6 58 95-159 41-98 (137)
207 1snl_A Nucleobindin 1, calnuc; 20.8 1.9E+02 0.0064 26.9 6.9 68 1188-1256 22-98 (103)
208 1top_A Troponin C; contractIle 20.6 37 0.0013 34.0 1.9 40 1429-1468 13-52 (162)
209 2ehb_A Calcineurin B-like prot 20.5 1.1E+02 0.0036 32.3 5.6 70 1179-1257 30-101 (207)
210 1y1x_A Leishmania major homolo 20.4 1.6E+02 0.0056 30.5 7.1 63 1186-1257 93-156 (191)
211 2opo_A Polcalcin CHE A 3; calc 20.2 21 0.00073 32.0 -0.0 37 1430-1466 5-41 (86)
No 1
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=100.00 E-value=5.1e-37 Score=348.70 Aligned_cols=224 Identities=24% Similarity=0.497 Sum_probs=194.2
Q ss_pred eeeeeeeccchhhhhhHHHHhhhheeeeeeccCChhHHHHHHHHhHHHHHHHHHHHHHHhhhcc-cccccccccceeehh
Q psy12306 899 KIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFR-FKNYFSDAWNVFDFV 977 (1643)
Q Consensus 899 ~~~~iv~s~~Fe~~I~~lIllN~i~la~e~~~~~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g-~~~Yf~~~wNifDfi 977 (1643)
+++++++|++|++++.++|++|+++++++++++++.+...++.+|.+|+++|++|+++|+++.| +++|++++||++|++
T Consensus 4 ~~~~iv~~~~f~~~i~~~I~ln~i~l~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~ 83 (229)
T 4dxw_A 4 FFSSLKDNRIFQFTVVSIIILNAVLIGATTYELDPLFLETIHLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTV 83 (229)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHHHSTTTCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHH
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHH
Confidence 5778999999999999999999999999999999999999999999999999999999999986 579999999999999
Q ss_pred hHhHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12306 978 IVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVM 1057 (1643)
Q Consensus 978 vVi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~v~lLl~l 1057 (1643)
++++++++.. + ...++.+|++|++|++|++|+.+++|.++.++.+|.|++.++++++++
T Consensus 84 ~v~~~~i~~~--------------~-------~~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~ 142 (229)
T 4dxw_A 84 IVAISLIPIP--------------N-------NSSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFI 142 (229)
T ss_dssp HHHHTTCC-----------------------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC--------------c-------cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998765432 1 113567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCC
Q psy12306 1058 LFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVS 1137 (1643)
Q Consensus 1058 ~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~ 1137 (1643)
++++||++||++||+.. +.||+|+++|++++|+++|||||+++|++++...
T Consensus 143 ~~~ifa~~g~~lf~~~~---------~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~-------------------- 193 (229)
T 4dxw_A 143 ILYIYATMGAILFGNDD---------PSRWGDLGISLITLFQVLTLSSWETVMLPMQEIY-------------------- 193 (229)
T ss_dssp HHHHHHHHHHHHTTTTS---------CTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHHHHhccCC---------cccccCHHHHHHHHHHHHccCCHHHHHHHHHHhC--------------------
Confidence 99999999999999742 3589999999999999999999999999988542
Q ss_pred cCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy12306 1138 CGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTR 1175 (1643)
Q Consensus 1138 Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~~~~ 1175 (1643)
+++.+||++|+++++++++|||+|+|+|||++.++
T Consensus 194 ---~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~~ 228 (229)
T 4dxw_A 194 ---WWSWVYFFSFIIICSITILNLVIAILVDVVIQKKL 228 (229)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 36678999999999999999999999999997644
No 2
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=99.97 E-value=3.7e-33 Score=327.49 Aligned_cols=230 Identities=25% Similarity=0.495 Sum_probs=199.5
Q ss_pred CcccccceeeeeeeccchhhhhhHHHHhhhheeeeeecc-CChhHHHHHHHHhHHHHHHHHHHHHHHhhhcccccccccc
Q psy12306 892 PKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYR-QPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDA 970 (1643)
Q Consensus 892 P~~~~r~~~~~iv~s~~Fe~~I~~lIllN~i~la~e~~~-~~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g~~~Yf~~~ 970 (1643)
|++++|++++.+++|++|++++.++|++|++++++++++ .+..+...+..++.+|+++|++|+++|+++.| ++|++++
T Consensus 15 ~~~~~r~~~~~i~~~~~f~~~i~~li~l~~i~~~~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lrl~~~~-~~y~~~~ 93 (285)
T 3rvy_A 15 RGSHMYLRITNIVESSFFTKFIIYLIVLNGITMGLETSKTFMQSFGVYTTLFNQIVITIFTIEIILRIYVHR-ISFFKDP 93 (285)
T ss_dssp ----CHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTTCTTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTG-GGGGGCH
T ss_pred CchHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHcCC
Confidence 345589999999999999999999999999999999876 66677889999999999999999999999999 6899999
Q ss_pred cceeehhhHhHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q psy12306 971 WNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPY 1050 (1643)
Q Consensus 971 wNifDfivVi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~ 1050 (1643)
||++|++++++++++.. + .++++|++|++|++|+++..+++|.++.++..+.+.+.+
T Consensus 94 wn~~Dl~~v~~~~i~~~--------------~---------~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~~~~~l~~ 150 (285)
T 3rvy_A 94 WSLFDFFVVAISLVPTS--------------S---------GFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLS 150 (285)
T ss_dssp HHHHHHHHHHHHHSCSS--------------S---------SCTHHHHHGGGGGGHHHHSSTTHHHHHHHHHHHGGGGHH
T ss_pred hHHhHHHHHHHHHHccc--------------c---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998875321 1 246789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccH-HHHHhhcCCCCCcccCCCCCCC
Q psy12306 1051 VALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQ-DIMLDCSNRPSEVKCDAASDGN 1129 (1643)
Q Consensus 1051 v~lLl~l~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~-~im~~~~~~~~~~~Cd~~~~~~ 1129 (1643)
+++++++++++||++|+++||+.. +.||+|+++|+.++|+++|++||+ ++|++.+..
T Consensus 151 ~~~~~~~~~~~fa~~g~~~f~~~~---------~~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~------------- 208 (285)
T 3rvy_A 151 VIALMTLFFYIFAIMATQLFGERF---------PEWFGTLGESFYTLFQVMTLESWSMGIVRPLMEV------------- 208 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC---------HHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTT-------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCccc---------ccccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHc-------------
Confidence 999999999999999999998642 347999999999999999999999 999887642
Q ss_pred CCCCCCCCcCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy12306 1130 PTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDW 1177 (1643)
Q Consensus 1130 ~~~~~~~~Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~~~~~~ 1177 (1643)
++++..||++|+++++++++|+|+|+|+++|++..+++
T Consensus 209 ----------~~~~~~~f~~~~~i~~~~~lnl~~aii~~~f~~~~~~~ 246 (285)
T 3rvy_A 209 ----------YPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILNQKE 246 (285)
T ss_dssp ----------CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ----------CChHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23677899999999999999999999999998766543
No 3
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=99.97 E-value=2.8e-32 Score=309.68 Aligned_cols=202 Identities=22% Similarity=0.422 Sum_probs=162.2
Q ss_pred HHHhhcccccchhHHHHH-----------------------HhhhhchhhhHhhhhhheeeEEEeceecCcccccccCCc
Q psy12306 567 VWCHWICNHDHFGNAILF-----------------------LGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNL 623 (1643)
Q Consensus 567 ~~c~~iv~~~~F~~~Il~-----------------------L~~~d~ift~iF~iE~~lKiia~G~~~~~~~Y~r~~WN~ 623 (1643)
.+|+++++|++|+.++++ ++++|++|+++|++|+++|+++.| ++.+|++|+||+
T Consensus 3 ~~~~~iv~~~~f~~~i~~~I~ln~i~l~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lri~~~~---~~~~y~~~~wni 79 (229)
T 4dxw_A 3 PFFSSLKDNRIFQFTVVSIIILNAVLIGATTYELDPLFLETIHLLDYGITIFFVIEILIRFIGEK---QKADFFKSGWNI 79 (229)
T ss_dssp CSSTTTTTCHHHHHHHHHHHHHHHHSTTTCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CHHHH
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---chhHHhcCCcHH
Confidence 478999999999987665 678999999999999999999997 346999999999
Q ss_pred ccEEEehhhhHHHhhcccchhHHHHHHHhhhhhhhhhhhcccChhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhhe
Q psy12306 624 LDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLF 703 (1643)
Q Consensus 624 lDf~vVi~sli~~~~~~~~ls~lr~lR~lRvLRpLR~i~~~~~lk~vv~~l~~si~~i~nv~lv~~l~~~iFaiiG~~lF 703 (1643)
+|+++++.++++... ...++.+|.+|++|++|+++..|++|.+.+++.+++|+++++.++.++++
T Consensus 80 ~D~~~v~~~~i~~~~----~~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~~~----------- 144 (229)
T 4dxw_A 80 FDTVIVAISLIPIPN----NSSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFIIL----------- 144 (229)
T ss_dssp HHHHHHHHTTCC------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHhhcCc----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 999999998876532 12357789999999999999999999999999999999998766654444
Q ss_pred eceeeEEEeccccccchhHHHHHHHHHhhhhcccccCCcccccCCCCCCCccccCCceeeecCCCCCCCccccccccCCc
Q psy12306 704 KYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHR 783 (1643)
Q Consensus 704 ~~~~rc~~~~i~~i~~l~~~~~~~~~iFai~Gv~lF~Gk~~~C~d~~~~~~~~C~~~~~~~~~g~~~~~~~~~~~W~~~~ 783 (1643)
++||++|+++|+|.. +
T Consensus 145 -------------------------~ifa~~g~~lf~~~~---------------------------------------~ 160 (229)
T 4dxw_A 145 -------------------------YIYATMGAILFGNDD---------------------------------------P 160 (229)
T ss_dssp -------------------------HHHHHHHHHHTTTTS---------------------------------------C
T ss_pred -------------------------HHHHHHHHHHhccCC---------------------------------------c
Confidence 457777777776520 2
Q ss_pred cccccHHHHHHHhhhhcccCCchhhhhhhcccccCCCCcccccccceeeEeEEEeehhhHHHHHHHHHHHHHhhhchh
Q psy12306 784 FHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEG 861 (1643)
Q Consensus 784 ~nFDn~~~a~ltLF~v~T~egW~dimy~~~ds~~~~~~P~~~~~~~~~iyFi~fiiig~ff~lNLfvgvii~~F~~~~ 861 (1643)
.||||+++|++|+|+++|+|||+|+|++++++. ++..+||++|+++|+++++|||+|+++++|++++
T Consensus 161 ~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~-----------~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~ 227 (229)
T 4dxw_A 161 SRWGDLGISLITLFQVLTLSSWETVMLPMQEIY-----------WWSWVYFFSFIIICSITILNLVIAILVDVVIQKK 227 (229)
T ss_dssp TTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTC-----------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHHHHccCCHHHHHHHHHHhC-----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 389999999999999999999999999998853 3566899999999999999999999999998754
No 4
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=99.94 E-value=4.4e-29 Score=292.81 Aligned_cols=205 Identities=26% Similarity=0.534 Sum_probs=168.9
Q ss_pred CChhhHHHhhcccccchhHHHHH------------------------HhhhhchhhhHhhhhhheeeEEEeceecCcccc
Q psy12306 562 TNPFRVWCHWICNHDHFGNAILF------------------------LGYFDNFFTAVFTIEILLKIISYGFILHDGAFC 617 (1643)
Q Consensus 562 ~n~~R~~c~~iv~~~~F~~~Il~------------------------L~~~d~ift~iF~iE~~lKiia~G~~~~~~~Y~ 617 (1643)
.+++|+.|+++++|++|+.++++ +.++|++|+++|++|+++|+++.|. +|+
T Consensus 16 ~~~~r~~~~~i~~~~~f~~~i~~li~l~~i~~~~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lrl~~~~~-----~y~ 90 (285)
T 3rvy_A 16 GSHMYLRITNIVESSFFTKFIIYLIVLNGITMGLETSKTFMQSFGVYTTLFNQIVITIFTIEIILRIYVHRI-----SFF 90 (285)
T ss_dssp ---CHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTTCTTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTGG-----GGG
T ss_pred chHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-----HHH
Confidence 45589999999999999987654 5678999999999999999999993 899
Q ss_pred cccCCcccEEEehhhhHHHhhcccchhHHHHHHHhhhhhhhhhhhcccChhHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy12306 618 RSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAV 697 (1643)
Q Consensus 618 r~~WN~lDf~vVi~sli~~~~~~~~ls~lr~lR~lRvLRpLR~i~~~~~lk~vv~~l~~si~~i~nv~lv~~l~~~iFai 697 (1643)
+++||++|+++++.+++... ..++.+|++|++|++|+++..+++|.++.++.+++|.+.++++++++++
T Consensus 91 ~~~wn~~Dl~~v~~~~i~~~------~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~~~~~l~~~~~~~~~~~----- 159 (285)
T 3rvy_A 91 KDPWSLFDFFVVAISLVPTS------SGFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTLFF----- 159 (285)
T ss_dssp GCHHHHHHHHHHHHHHSCSS------SSCTHHHHHGGGGGGHHHHSSTTHHHHHHHHHHHGGGGHHHHHHHHHHH-----
T ss_pred cCChHHhHHHHHHHHHHccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99999999999988876542 2256789999999999999999999999999999999988766554444
Q ss_pred hhhhheeceeeEEEeccccccchhHHHHHHHHHhhhhcccccCCcccccCCCCCCCccccCCceeeecCCCCCCCccccc
Q psy12306 698 IGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVR 777 (1643)
Q Consensus 698 iG~~lF~~~~rc~~~~i~~i~~l~~~~~~~~~iFai~Gv~lF~Gk~~~C~d~~~~~~~~C~~~~~~~~~g~~~~~~~~~~ 777 (1643)
++||++|+++|+|..
T Consensus 160 -------------------------------~~fa~~g~~~f~~~~---------------------------------- 174 (285)
T 3rvy_A 160 -------------------------------YIFAIMATQLFGERF---------------------------------- 174 (285)
T ss_dssp -------------------------------HHHHHHHHHHHTTTC----------------------------------
T ss_pred -------------------------------HHHHHHHHHHhCccc----------------------------------
Confidence 357777777776531
Q ss_pred cccCCccccccHHHHHHHhhhhcccCCch-hhhhhhcccccCCCCcccccccceeeEeEEEeehhhHHHHHHHHHHHHHh
Q psy12306 778 EWSKHRFHFDDVAKAMLTLFTVSTFEGWP-GLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVT 856 (1643)
Q Consensus 778 ~W~~~~~nFDn~~~a~ltLF~v~T~egW~-dimy~~~ds~~~~~~P~~~~~~~~~iyFi~fiiig~ff~lNLfvgvii~~ 856 (1643)
+.||+|++.|+.++|+++|++||. |+||..++. .++.++||++|+++++++++|+|+|++.++
T Consensus 175 -----~~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~-----------~~~~~~~f~~~~~i~~~~~lnl~~aii~~~ 238 (285)
T 3rvy_A 175 -----PEWFGTLGESFYTLFQVMTLESWSMGIVRPLMEV-----------YPYAWVFFIPFIFVVTFVMINLVVAICVDA 238 (285)
T ss_dssp -----HHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTT-----------CTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----ccccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHc-----------CChHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 237999999999999999999999 999977654 345678999999999999999999999999
Q ss_pred hhchhhh
Q psy12306 857 FQNEGEQ 863 (1643)
Q Consensus 857 F~~~~e~ 863 (1643)
|++..++
T Consensus 239 f~~~~~~ 245 (285)
T 3rvy_A 239 MAILNQK 245 (285)
T ss_dssp C------
T ss_pred HHHHHHH
Confidence 9875543
No 5
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=99.93 E-value=1.3e-26 Score=241.97 Aligned_cols=150 Identities=21% Similarity=0.364 Sum_probs=128.0
Q ss_pred Hhhhhhhhccc-cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCc
Q psy12306 1168 DNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGT 1246 (1643)
Q Consensus 1168 dnF~~~~~~~~-~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~ 1246 (1643)
|||++++++++ .++++|+++|+++|++|||+|||+|++.++++|+++|+||||++| |++. .|+.||||++++|+
T Consensus 1 eNF~~~t~d~~~~L~~~dl~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~k--Pn~~---~L~~mdiPl~~~~~ 75 (168)
T 4dck_A 1 ENFSVATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAK--PNQI---SLINMDLPMVSGDR 75 (168)
T ss_dssp ---CBCCTTCSSCBCHHHHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCS--SCHH---HHHHSCCEEETTTE
T ss_pred CchhhhhhccccCCCHHHHHHHHHHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCC--CCHH---HHHHcCCCcCCCCE
Confidence 79999999987 899999999999999999999999999999999999999999999 7776 47999999999999
Q ss_pred eEhHHHHHHHHHhhhhccccCCcchhHHHHHHHHHHHHhhcCccccccccCCCCCCcceeehhHHHHHHHHHHHHHHHHH
Q psy12306 1247 VLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKR 1326 (1643)
Q Consensus 1247 v~f~~~l~~l~~~~l~i~~~g~~~~~~~~l~~~~~~~w~~~~~~~l~~~~~~~~~~~~~tv~~~~a~~~I~~~fr~f~~~ 1326 (1643)
|||+++|+||+|++++ +.|++++.+++++..+++.|+.. ...+|...+..++++.|||.+||++||+|+.+
T Consensus 76 Vhf~dvL~ALtk~vlg--~~~~~~~~~~~~e~~~~~~~P~~-------~~~~pi~tt~~~~~e~~aA~~IQra~R~~~~r 146 (168)
T 4dck_A 76 IHCMDILFAFTKRVLG--ESGEMDALKIQMEEKFMAANPSK-------ISYEPITTTLRRKHEEVSAMVIQRAFRRHLLQ 146 (168)
T ss_dssp EEHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCG-------GGCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHHhC--CcccHHHHHHHHHHHHHHhCCCc-------CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998 45666667777778888877642 12345556777789999999999999999988
Q ss_pred HHHhh
Q psy12306 1327 KEQEL 1331 (1643)
Q Consensus 1327 ~~~~~ 1331 (1643)
+..+.
T Consensus 147 ~~~~~ 151 (168)
T 4dck_A 147 RSLKH 151 (168)
T ss_dssp HHHHH
T ss_pred ccccc
Confidence 76653
No 6
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.89 E-value=1.1e-24 Score=273.60 Aligned_cols=244 Identities=19% Similarity=0.352 Sum_probs=195.8
Q ss_pred ccccCcccccceeeeeeec-------cchhhhhhHHHHhhhheeeeeeccCC---------------------------h
Q psy12306 888 RRYIPKQRLQYKIWWFVTS-------QYFEYTIFCLIMINTLTLAMKFYRQP---------------------------L 933 (1643)
Q Consensus 888 ~~~~P~~~~r~~~~~iv~s-------~~Fe~~I~~lIllN~i~la~e~~~~~---------------------------~ 933 (1643)
.+..|++++|+++|.++++ +.|+++++++|++|+++++++++++. .
T Consensus 156 ~~~~p~~~~r~~lw~l~e~p~sS~~a~~f~~~~i~~Illsii~~~leT~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (514)
T 2r9r_B 156 ERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGYQQST 235 (514)
T ss_dssp CCCCCSCSSHHHHHHTTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHTCSTTTTSCCCCHHHHHHHHHSSCCCT
T ss_pred cccCchHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccc
Confidence 3456889999999999987 58999999999999999999976421 1
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHhhhcccc-cccccccceeehhhHhHHHHHHhcCCCccccccccCCCCCcccCccee
Q psy12306 934 FYADILDKMNMFFTTVFALEFVFKLAAFRFK-NYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLS 1012 (1643)
Q Consensus 934 ~~~~~l~~in~~ft~iF~iE~iLKi~a~g~~-~Yf~~~wNifDfivVi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~ 1012 (1643)
.+...+.++|.+|+++|++|+++|+++.+.+ +|++++||++|+++++++++.++...... .|.. .......
T Consensus 236 ~~~~~l~~ie~i~~~iFtiE~ilR~~~~~~k~~Y~ks~wniiDli~iip~~i~l~~~~~~~-------~~~~-~~~~~~~ 307 (514)
T 2r9r_B 236 SFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNK-------SVLQ-FQNVRRV 307 (514)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHSSCSSSSTTSHHHHHHHHTTHHHHHHHHHHHTSC-------SHHH-HHTTHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHhchhHHHHHHHHHHHHHHHHhhhccc-------cchh-hhhHHHH
Confidence 2456788999999999999999999998754 89999999999999999998877321000 0000 0011234
Q ss_pred eeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhH
Q psy12306 1013 INFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQ 1092 (1643)
Q Consensus 1013 i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~v~lLl~l~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~ 1092 (1643)
++++|++|++|++|++++.++++.+..++..|++.+..+++++++++++||.+++...+. +.+.||++++.
T Consensus 308 lrvlRllRvlRilkL~r~~~~l~~l~~tl~~s~~~l~~ll~~l~i~~~if~~~~~~~e~~---------~~~~~F~s~~~ 378 (514)
T 2r9r_B 308 VQIFRIMRILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAD---------ERDSQFPSIPD 378 (514)
T ss_dssp HHHHHHHGGGGGGGGGGSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CTTCSCSSHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecc---------CCCccccchhh
Confidence 788999999999999999999999999999999999988888888888899888766432 24679999999
Q ss_pred HHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCCcCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhh
Q psy12306 1093 AVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDY 1172 (1643)
Q Consensus 1093 A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~ 1172 (1643)
|+...++.+|+.||.++.. . +..+ -+|++++++++++++|++||+|+++|++
T Consensus 379 a~y~~~vT~TTvGYGDi~P-----------------------~----t~~g-r~f~~~~~l~G~~~l~l~iavI~~~f~~ 430 (514)
T 2r9r_B 379 AFWWAVVSMTTVGYGDMVP-----------------------T----TIGG-KIVGSLCAIAGVLTIALPVPVIVSNFNY 430 (514)
T ss_dssp HHHHHHHHHTTCCCSSSCC-----------------------C----SHHH-HHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred hhheeeeEEEecccCCCCC-----------------------C----Ccch-HhhehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999976421 0 1122 2577889999999999999999999997
Q ss_pred hhhc
Q psy12306 1173 LTRD 1176 (1643)
Q Consensus 1173 ~~~~ 1176 (1643)
..++
T Consensus 431 ~~~~ 434 (514)
T 2r9r_B 431 FYHR 434 (514)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 7
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=99.89 E-value=8.3e-24 Score=212.15 Aligned_cols=110 Identities=25% Similarity=0.484 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhhhhhhhccc-cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHh
Q psy12306 1158 IINLFVAVIMDNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVS 1236 (1643)
Q Consensus 1158 ilNLfVAvIidnF~~~~~~~~-~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~ 1236 (1643)
++|||||||+|||++++++++ .++++|+++|+++|++|||+|||+|++.+++.|+++|+||||+++ |++. .|+.
T Consensus 14 ~LNLfIAVIlenF~~~~~~~~~~l~~~dl~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~k--pnr~---~L~~ 88 (129)
T 2kav_A 14 LVPRGSHMASENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAK--PNKV---QLIA 88 (129)
T ss_dssp ----------CCSCCTTSSCSCSSCHHHHHHHHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCT--TCCH---HHHH
T ss_pred hhheeeeeeeccHHHHHHhhccCCCHHHHHHHHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCC--ccHH---HHHH
Confidence 699999999999999999877 599999999999999999999999999999999999999999999 7776 4789
Q ss_pred cCCcccCCCceEhHHHHHHHHHhhhhccccCCcchhHH
Q psy12306 1237 MNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANA 1274 (1643)
Q Consensus 1237 ~~~p~~~~~~v~f~~~l~~l~~~~l~i~~~g~~~~~~~ 1274 (1643)
||||++++|+|||+++|+|++|++++ ++|++++.++
T Consensus 89 mniPl~~g~~Vhf~dvL~ALtr~vlg--~~~~~~~~~~ 124 (129)
T 2kav_A 89 MDLPMVSGDRIHCLDILFAFTKRVLG--ESGEMDALRI 124 (129)
T ss_dssp TCCCEETTTEEEHHHHHHHHHHHTTT--TTSSGGGGGG
T ss_pred cCCccCCCCEEeHHHHHHHHHHHHhC--CcchHHHHHH
Confidence 99999999999999999999999987 6677665543
No 8
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=99.80 E-value=3.8e-21 Score=200.87 Aligned_cols=90 Identities=23% Similarity=0.397 Sum_probs=81.0
Q ss_pred ccccccccccc-cCCCCchhHHhhhcccCCccccCcccccchHhhhhhcCCCCCCCCCCccccccc--------------
Q psy12306 1418 DNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACE-------------- 1482 (1643)
Q Consensus 1418 dnf~~~~r~~s-ilg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~plg~gk~cp~r~a~~-------------- 1482 (1643)
|||+|+|||++ +|||||||+|+++|++|||+|||+|+|.|+.++|++++||||+|| |+|.++.
T Consensus 1 eNF~~~t~d~~~~L~~~dl~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~k--Pn~~~L~~mdiPl~~~~~Vhf 78 (168)
T 4dck_A 1 ENFSVATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAK--PNQISLINMDLPMVSGDRIHC 78 (168)
T ss_dssp ---CBCCTTCSSCBCHHHHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCS--SCHHHHHHSCCEEETTTEEEH
T ss_pred CchhhhhhccccCCCHHHHHHHHHHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCC--CCHHHHHHcCCCcCCCCEEeH
Confidence 79999999996 999999999999999999999999999999999999999999999 9999874
Q ss_pred --------------------------------------------cccccccchhhhhhhHHHHHhhhhhcc
Q psy12306 1483 --------------------------------------------EEVTVGKFYATFLIQDYFRRFKKRKEQ 1509 (1643)
Q Consensus 1483 --------------------------------------------~~~tvgk~y~~~~i~~~~r~~~~~~~~ 1509 (1643)
...++|+.||+.+||++||+++.|+..
T Consensus 79 ~dvL~ALtk~vlg~~~~~~~~~~~~e~~~~~~~P~~~~~~pi~tt~~~~~e~~aA~~IQra~R~~~~r~~~ 149 (168)
T 4dck_A 79 MDILFAFTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSAMVIQRAFRRHLLQRSL 149 (168)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCGGGCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcccHHHHHHHHHHHHHHhCCCcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 134589999999999999999988754
No 9
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}
Probab=99.79 E-value=4.1e-21 Score=191.84 Aligned_cols=104 Identities=25% Similarity=0.461 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccC
Q psy12306 1044 SFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCD 1123 (1643)
Q Consensus 1044 S~~~L~~v~lLl~l~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd 1123 (1643)
|++.+.|+++++++++|+||++||++||+.. +.||+|+++|++||||++|+|+|+++|++.+...
T Consensus 2 s~~g~~nv~~ll~l~~~ifAi~G~~lFg~~~---------~~~F~~~~~s~ltLF~i~T~e~W~~~~~~~~~~~------ 66 (112)
T 4f4l_A 2 SHMGVGSVAALLTVVFYIAAVMATNLYGATF---------PEWFGDLSKSLYTLFQVMTLESWSMGIVRPVMNV------ 66 (112)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTC---------HHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHTTT------
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHCCCc---------cccccCHHHHHHHHHHHHHccccHHHHHHHHHhc------
Confidence 5688999999999999999999999999753 3489999999999999999999997776544321
Q ss_pred CCCCCCCCCCCCCCcCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhhhhhccc
Q psy12306 1124 AASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWS 1178 (1643)
Q Consensus 1124 ~~~~~~~~~~~~~~Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~~~~~~~ 1178 (1643)
++++++||++|+++++|+++|||+|||+|+|+...++++
T Consensus 67 ----------------~~~a~iyFi~fi~i~~fi~lNLfiaVi~~~f~~~~~~~~ 105 (112)
T 4f4l_A 67 ----------------HPNAWVFFIPFIMLTTFTVLNLFIGIIVDAMAITKEQEE 105 (112)
T ss_dssp ----------------STTTHHHHHHHHHHHHHHHHHHHTTTC------------
T ss_pred ----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246779999999999999999999999999998765543
No 10
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=99.77 E-value=3.9e-20 Score=185.64 Aligned_cols=72 Identities=24% Similarity=0.468 Sum_probs=59.8
Q ss_pred hhhHHHHhhhcccccccccccc-CCCCchhHHhhhcccCCccccCcccccchHhhhhhcCCCCCCCCCCcccccc
Q psy12306 1408 IINLFVAVIMDNFDYLTRDWSI-LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVAC 1481 (1643)
Q Consensus 1408 ~~nlfvavimdnf~~~~r~~si-lg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~plg~gk~cp~r~a~ 1481 (1643)
.+|||||||||||+|.++|+++ +||+|+|+|+++|++|||+|||+|++.++.++|+++.||||+|| |+|+++
T Consensus 14 ~LNLfIAVIlenF~~~~~~~~~~l~~~dl~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~k--pnr~~L 86 (129)
T 2kav_A 14 LVPRGSHMASENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAK--PNKVQL 86 (129)
T ss_dssp ----------CCSCCTTSSCSCSSCHHHHHHHHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCT--TCCHHH
T ss_pred hhheeeeeeeccHHHHHHhhccCCCHHHHHHHHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCC--ccHHHH
Confidence 6899999999999999999976 99999999999999999999999999999999999999999999 999765
No 11
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.75 E-value=1.1e-18 Score=219.27 Aligned_cols=209 Identities=15% Similarity=0.202 Sum_probs=156.4
Q ss_pred chhhhhhhhccccc-------cchhhhHhHHHHHHHHHHHhhccCCCccchhhh-------hhhhhHHHHHHHHHHHhhh
Q psy12306 246 NRRMRRACRKAVKS-------QGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQ-------EVTNIFFVALFTMEMTLKM 311 (1643)
Q Consensus 246 ~~~~r~~~~~iv~s-------~~F~~~i~~~IllN~i~la~e~~~~~~~~~~~l-------~~~n~~~~~lf~~e~~~~~ 311 (1643)
++++|++++.++++ +.|+++++++|++|++++++++++..+...+.. ...+. .....
T Consensus 161 ~~~~r~~lw~l~e~p~sS~~a~~f~~~~i~~Illsii~~~leT~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 231 (514)
T 2r9r_B 161 ENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQ---------STIGY 231 (514)
T ss_dssp SCSSHHHHHHTTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHTCSTTTTSCCCCHHHHHH---------HHHSS
T ss_pred hHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccc---------ccccc
Confidence 34567777777776 579999999999999999999976421110000 00000 00000
Q ss_pred ----hcccccchhhhhHHHHHHHHHHHhhheeccc-ccccccccccceeeeehhhhhHHhhhccCC------CCCcchhh
Q psy12306 312 ----YSLGFQEVTNIFFVALFTMEMTLKMYSLGFQ-GYFVSLFNRFDCFVVIGSIGEMILTRTNIM------PPLGVSVL 380 (1643)
Q Consensus 312 ----~~~~~~~~~~~~f~~iF~iE~iLKi~a~G~~-~Yf~~~wNifD~~vvl~sii~lil~~~~~~------~~~~l~vL 380 (1643)
.......++|++|+++|++|+++|+++.+.+ +|++++||++|+++++++++.+++...... ....++++
T Consensus 232 ~~~~~~~~~l~~ie~i~~~iFtiE~ilR~~~~~~k~~Y~ks~wniiDli~iip~~i~l~~~~~~~~~~~~~~~~~~lrvl 311 (514)
T 2r9r_B 232 QQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNKSVLQFQNVRRVVQIF 311 (514)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHSSCSSSSTTSHHHHHHHHTTHHHHHHHHHHHTSCSHHHHHTTHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHhchhHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Confidence 0011234679999999999999999999876 999999999999999999988876432110 01247889
Q ss_pred HHHHHhHhhhhhhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhh
Q psy12306 381 RCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLT 460 (1643)
Q Consensus 381 R~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l~~l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vT 460 (1643)
|++|++|++|+.|++++++.+..++..++++++.+++++++++++||.+++...++ .+..||++++.|+..
T Consensus 312 RllRvlRilkL~r~~~~l~~l~~tl~~s~~~l~~ll~~l~i~~~if~~~~~~~e~~---------~~~~~F~s~~~a~y~ 382 (514)
T 2r9r_B 312 RIMRILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAD---------ERDSQFPSIPDAFWW 382 (514)
T ss_dssp HHHGGGGGGGGGGSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CTTCSCSSHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecc---------CCCccccchhhhhhe
Confidence 99999999999999999999999999999999999999999999999999876543 245788888777777
Q ss_pred heecccCCCCCC
Q psy12306 461 VFQQEQKGQEES 472 (1643)
Q Consensus 461 lF~iltge~w~~ 472 (1643)
.++.+|..||.+
T Consensus 383 ~~vT~TTvGYGD 394 (514)
T 2r9r_B 383 AVVSMTTVGYGD 394 (514)
T ss_dssp HHHHHTTCCCSS
T ss_pred eeeEEEecccCC
Confidence 777777777764
No 12
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}
Probab=99.73 E-value=1.5e-19 Score=180.56 Aligned_cols=100 Identities=26% Similarity=0.544 Sum_probs=72.4
Q ss_pred cccchhHHHHHHHHHhhhhcccccCCcccccCCCCCCCccccCCceeeecCCCCCCCccccccccCCccccccHHHHHHH
Q psy12306 716 TIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLT 795 (1643)
Q Consensus 716 ~i~~l~~~~~~~~~iFai~Gv~lF~Gk~~~C~d~~~~~~~~C~~~~~~~~~g~~~~~~~~~~~W~~~~~nFDn~~~a~lt 795 (1643)
.++|+++++++++++||++|+++|+|+. +.||||+++|++|
T Consensus 5 g~~nv~~ll~l~~~ifAi~G~~lFg~~~---------------------------------------~~~F~~~~~s~lt 45 (112)
T 4f4l_A 5 GVGSVAALLTVVFYIAAVMATNLYGATF---------------------------------------PEWFGDLSKSLYT 45 (112)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHTTTC---------------------------------------HHHHSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCc---------------------------------------cccccCHHHHHHH
Confidence 4556666666677789999999997642 2379999999999
Q ss_pred hhhhcccCCchhhhhhhcccccCCCCcccccccceeeEeEEEeehhhHHHHHHHHHHHHHhhhchhhhh
Q psy12306 796 LFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQE 864 (1643)
Q Consensus 796 LF~v~T~egW~dimy~~~ds~~~~~~P~~~~~~~~~iyFi~fiiig~ff~lNLfvgvii~~F~~~~e~~ 864 (1643)
|||++|+|||+++|++.+.+ .+|++++||++|+++|+|+++|||+||++++|++.++++
T Consensus 46 LF~i~T~e~W~~~~~~~~~~----------~~~~a~iyFi~fi~i~~fi~lNLfiaVi~~~f~~~~~~~ 104 (112)
T 4f4l_A 46 LFQVMTLESWSMGIVRPVMN----------VHPNAWVFFIPFIMLTTFTVLNLFIGIIVDAMAITKEQE 104 (112)
T ss_dssp HHHHHTTTTCCCCCHHHHTT----------TSTTTHHHHHHHHHHHHHHHHHHHTTTC-----------
T ss_pred HHHHHHccccHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988865443 356778999999999999999999999999998765543
No 13
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.68 E-value=1.7e-17 Score=200.64 Aligned_cols=211 Identities=14% Similarity=0.090 Sum_probs=171.5
Q ss_pred eccchhhhhhHHHHhhhheeeeeeccC-ChhHHHHHHHHhHHHHHHHHHHHHHHhhhcccc-cccccccceeehhhHhHH
Q psy12306 905 TSQYFEYTIFCLIMINTLTLAMKFYRQ-PLFYADILDKMNMFFTTVFALEFVFKLAAFRFK-NYFSDAWNVFDFVIVMGS 982 (1643)
Q Consensus 905 ~s~~Fe~~I~~lIllN~i~la~e~~~~-~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g~~-~Yf~~~wNifDfivVi~s 982 (1643)
.|+.|+++++++|++|+++++++++++ +......++.++.++.++|++|+++|+++.+.+ .|++++||++|++++++.
T Consensus 6 ~s~~f~~~~~~~i~ls~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~f~~e~~~r~~~~~~~~~~~~~~~~i~Dl~~i~~p 85 (355)
T 3beh_A 6 FLRIYAPLNAVLAAPGLLAVAALTIPDMSGRSRLALAALLAVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVLAVLVP 85 (355)
T ss_dssp -CCSSSSHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSSCCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccchhhhHHHHHHHHHhHHHHHHHHHHHHhcccccccceeccCcchHHHHHHHHHH
Confidence 356799999999999999999998875 556677888888888889999999999887654 588999999999998655
Q ss_pred HHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12306 983 FIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIY 1062 (1643)
Q Consensus 983 ii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~v~lLl~l~~fIf 1062 (1643)
+...+. .+ .+.+|++|++|++|++|..++++.+..++..+.+.+..++++++++++++
T Consensus 86 ~~~~~~------------~~----------~~~~r~lr~~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~ 143 (355)
T 3beh_A 86 LAAFLL------------DG----------SPDWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGVTTLFGVVLFAV 143 (355)
T ss_dssp HHHHHS------------CC----------SGGGGGGGGGGGSHHHHTCSSHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh------------cc----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544331 01 24678888888999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCCcCcce
Q psy12306 1063 AVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDI 1142 (1643)
Q Consensus 1063 AiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~Cgs~~ 1142 (1643)
|++++.+++... +.+|.+++.|+...+..+|+.||.++.. .++.
T Consensus 144 a~~~~~~e~~~~---------~~~f~~~~~s~y~~~~t~ttvGygd~~p---------------------------~t~~ 187 (355)
T 3beh_A 144 ALAAYVIERDIQ---------PEKFGSIPQAMWWAVVTLSTTGYGDTIP---------------------------QSFA 187 (355)
T ss_dssp HHHHHHHHTTTC---------HHHHSSHHHHHHHHHHHHTTCCCSSSCC---------------------------CSHH
T ss_pred HHHHHHhhcCCC---------CcccccHHHHHHHHHhheeecCCCCCCC---------------------------CChh
Confidence 999999987532 2468999999999999999999975310 0122
Q ss_pred eeeeeehhhHHHHHHHHHHHHHHHHHhhhhhh
Q psy12306 1143 AYPYFISFYVLCSFLIINLFVAVIMDNFDYLT 1174 (1643)
Q Consensus 1143 a~iyFisf~ii~~fiilNLfVAvIidnF~~~~ 1174 (1643)
+. .|.+++++++++++++++|+|.++|....
T Consensus 188 ~~-~~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 218 (355)
T 3beh_A 188 GR-VLAGAVMMSGIGIFGLWAGILATGFYQEV 218 (355)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 45567888889999999999999998543
No 14
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E
Probab=99.61 E-value=6.4e-17 Score=144.89 Aligned_cols=79 Identities=75% Similarity=1.201 Sum_probs=66.1
Q ss_pred EhHHHHHHHHHhhhhccccCCcchhHHHHHHHHHHHHhhcCccccccccCCCCCCcceeehhHHHHHHHHHHHHHHHHHH
Q psy12306 1248 LFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRK 1327 (1643)
Q Consensus 1248 ~f~~~l~~l~~~~l~i~~~g~~~~~~~~l~~~~~~~w~~~~~~~l~~~~~~~~~~~~~tv~~~~a~~~I~~~fr~f~~~~ 1327 (1643)
.|+.+||||+|++|+||.+|+++++++|||..++++|++.+++++|.++||++ .+++||||+||+++||++||+|++|+
T Consensus 2 ~ftsTLfALIRtsL~IK~~~~~~~~d~ELR~~i~~iWp~~~~k~lD~lvpp~~-~~~lTVGKiYA~llI~d~~r~~k~r~ 80 (81)
T 3g43_E 2 PLGSTLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAG-DDEVTVGKFYATFLIQEYFRKFKKRE 80 (81)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------CCCCHHHHHHHHHHHHHHHTC-
T ss_pred chhHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHCcccChhhcccccCCCC-CCcEeehHHHHHHHHHHHHHHHHhcc
Confidence 48889999999999999999999999999999999999999999999998766 68999999999999999999998875
No 15
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=99.60 E-value=9.6e-17 Score=118.70 Aligned_cols=31 Identities=81% Similarity=1.233 Sum_probs=27.7
Q ss_pred ccccccccchhhhhhhHHHHHhhhhhccccc
Q psy12306 1482 EEEVTVGKFYATFLIQDYFRRFKKRKEQELK 1512 (1643)
Q Consensus 1482 ~~~~tvgk~y~~~~i~~~~r~~~~~~~~~~~ 1512 (1643)
.||||||||||||||||||||||||||++++
T Consensus 3 ~devTVGKfYatfLIQdyFRkfkkrke~~~~ 33 (37)
T 2be6_D 3 MDEVTVGKFYATFLIQEYFRKFKKRKEQGLV 33 (37)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcceeeehHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3899999999999999999999999999765
No 16
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=99.55 E-value=6.5e-15 Score=151.80 Aligned_cols=128 Identities=13% Similarity=0.163 Sum_probs=105.8
Q ss_pred ccccccchhhhHhHHHHHHHHHHHhhccCCCc-cchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHHHHHHHH
Q psy12306 255 KAVKSQGFYWLIIILVFLNTGVLATEHYQQPK-WLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMT 333 (1643)
Q Consensus 255 ~iv~s~~F~~~i~~~IllN~i~la~e~~~~~~-~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~iF~iE~i 333 (1643)
++++++.|+++++++|++|++.+++|++++.+ .....+ .+.|++|+++|++|++
T Consensus 1 ~~v~~~~f~~~i~~lIlls~~~~~~et~~~~~~~~~~~l-------------------------~~~d~~~~~iFt~E~~ 55 (132)
T 1ors_C 1 DVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRL-------------------------YLVDLILVIILWADYA 55 (132)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHH-------------------------HHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHH-------------------------HHHHHHHHHHHHHHHH
Confidence 36889999999999999999999999986543 222211 2357788888999999
Q ss_pred Hhhheec-ccccccccccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHH
Q psy12306 334 LKMYSLG-FQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSI 412 (1643)
Q Consensus 334 LKi~a~G-~~~Yf~~~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l 412 (1643)
+|+++.+ .++|++ ||++|++++++++++++.+ + ....+|++|++|++|++|+.|++++++.+..++.+|.+++
T Consensus 56 lRl~~~~~~~~y~~--~niiDllailp~~~~~~~~--~--~l~~lr~lRllRv~Rvlkl~r~~~~l~~l~~~l~~s~~~l 129 (132)
T 1ors_C 56 YRAYKSGDPAGYVK--KTLYEIPALVPAGLLALIE--G--HLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKL 129 (132)
T ss_dssp HHHHHTTSTTTTTT--TCGGGTGGGSCHHHHHHHH--H--HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHHhc--c--hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999876 458998 9999999999999887662 1 1124788999999999999999999999999999999987
Q ss_pred H
Q psy12306 413 A 413 (1643)
Q Consensus 413 ~ 413 (1643)
.
T Consensus 130 ~ 130 (132)
T 1ors_C 130 V 130 (132)
T ss_dssp S
T ss_pred c
Confidence 4
No 17
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=99.53 E-value=4e-15 Score=153.43 Aligned_cols=128 Identities=10% Similarity=0.183 Sum_probs=110.5
Q ss_pred eeeeccchhhhhhHHHHhhhheeeeeeccC-ChhHHHHHHHHhHHHHHHHHHHHHHHhhhc-ccccccccccceeehhhH
Q psy12306 902 WFVTSQYFEYTIFCLIMINTLTLAMKFYRQ-PLFYADILDKMNMFFTTVFALEFVFKLAAF-RFKNYFSDAWNVFDFVIV 979 (1643)
Q Consensus 902 ~iv~s~~Fe~~I~~lIllN~i~la~e~~~~-~~~~~~~l~~in~~ft~iF~iE~iLKi~a~-g~~~Yf~~~wNifDfivV 979 (1643)
++++++.|+++++++|++|++++++|++++ +..+...+..+|++|+++|++|+++|+++. ++++|++ ||++|++++
T Consensus 1 ~~v~~~~f~~~i~~lIlls~~~~~~et~~~~~~~~~~~l~~~d~~~~~iFt~E~~lRl~~~~~~~~y~~--~niiDllai 78 (132)
T 1ors_C 1 DVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVK--KTLYEIPAL 78 (132)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTTT--TCGGGTGGG
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHH
Confidence 468899999999999999999999998764 446788899999999999999999999876 4568999 999999999
Q ss_pred hHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHH
Q psy12306 980 MGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALP 1049 (1643)
Q Consensus 980 i~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~ 1049 (1643)
++++++...+ .....++++|++|++|++|+.|+.++++.+..++.+|.+.+.
T Consensus 79 lp~~~~~~~~------------------~~l~~lr~lRllRv~Rvlkl~r~~~~l~~l~~~l~~s~~~l~ 130 (132)
T 1ors_C 79 VPAGLLALIE------------------GHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKLV 130 (132)
T ss_dssp SCHHHHHHHH------------------HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhc------------------chHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9998876531 012236789999999999999999999999999999998864
No 18
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.49 E-value=1.1e-14 Score=176.05 Aligned_cols=174 Identities=11% Similarity=0.005 Sum_probs=133.4
Q ss_pred cccchhhhHhHHHHHHHHHHHhhccCCCc-cchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHHHHHHHHHhh
Q psy12306 258 KSQGFYWLIIILVFLNTGVLATEHYQQPK-WLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKM 336 (1643)
Q Consensus 258 ~s~~F~~~i~~~IllN~i~la~e~~~~~~-~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~iF~iE~iLKi 336 (1643)
.|+.|+++++++|++|++++++++++... .....+ +.++.++.++|++|+++|+
T Consensus 6 ~s~~f~~~~~~~i~ls~~~~~~~t~~~~~~~~~~~~-------------------------~~~~~~~~~~f~~e~~~r~ 60 (355)
T 3beh_A 6 FLRIYAPLNAVLAAPGLLAVAALTIPDMSGRSRLAL-------------------------AALLAVIWGAYLLQLAATL 60 (355)
T ss_dssp -CCSSSSHHHHHHHHHHHHHHHHTSSSCCHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccchhhhHHHHH-------------------------HHHHhHHHHHHHHHHHHhc
Confidence 46789999999999999999999987532 111111 1234455567999999999
Q ss_pred heeccc-ccccccccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHHHHH
Q psy12306 337 YSLGFQ-GYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASL 415 (1643)
Q Consensus 337 ~a~G~~-~Yf~~~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l~~l 415 (1643)
++.+.+ .|++++||++|++++++.+...+. .+++.+|.+|++|++|+.|+++.++.+..++..+.+.+..+
T Consensus 61 ~~~~~~~~~~~~~~~i~Dl~~i~~p~~~~~~--------~~~~~~r~lr~~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~ 132 (355)
T 3beh_A 61 LKRRAGVVRDRTPKIAIDVLAVLVPLAAFLL--------DGSPDWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGV 132 (355)
T ss_dssp HCCCSCSSCCCHHHHHHHHHHHHHHHHHHHS--------CCSGGGGGGGGGGGSHHHHTCSSHHHHHHHHHHTHHHHHHH
T ss_pred ccccccceeccCcchHHHHHHHHHHHHHHHh--------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988765 688999999999988544333221 13578899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCC
Q psy12306 416 LLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQ 469 (1643)
Q Consensus 416 ~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~ 469 (1643)
++++++++++||.+++.++++.- + +...+-.+++|||++|+.++++||-
T Consensus 133 ~~~~~~~~~~~a~~~~~~e~~~~---~--~~f~~~~~s~y~~~~t~ttvGygd~ 181 (355)
T 3beh_A 133 TTLFGVVLFAVALAAYVIERDIQ---P--EKFGSIPQAMWWAVVTLSTTGYGDT 181 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC---H--HHHSSHHHHHHHHHHHHTTCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHhhcCCC---C--cccccHHHHHHHHHhheeecCCCCC
Confidence 99999999999999999987531 0 0111234678888888888877763
No 19
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=99.47 E-value=1e-14 Score=164.56 Aligned_cols=217 Identities=11% Similarity=0.153 Sum_probs=151.8
Q ss_pred eeeeeccchhhhhhHHHHhhhheeeeeec-cCChhHHHHHHHHhHHHHHHHHHHHHHHhhhcc-cccccccccceeehhh
Q psy12306 901 WWFVTSQYFEYTIFCLIMINTLTLAMKFY-RQPLFYADILDKMNMFFTTVFALEFVFKLAAFR-FKNYFSDAWNVFDFVI 978 (1643)
Q Consensus 901 ~~iv~s~~Fe~~I~~lIllN~i~la~e~~-~~~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g-~~~Yf~~~wNifDfiv 978 (1643)
+++++++.|+++++++|++|++.++++++ +.++++...+..+|.++.++|++|+++|+.+.+ .++|+++ |++|+++
T Consensus 2 ~~~~~~~~f~~~i~~lil~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~iF~~e~~lr~~~~~~~~~y~~~--~iiDlla 79 (223)
T 1orq_C 2 GDVMEHPLVELGVSYAALLSVIVVVVECTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVKK--TLYEIPA 79 (223)
T ss_dssp TTTCCSHHHHTHHHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHH--HHHHCTT
T ss_pred hhHHhCchHHHHHHHHHHHHHHHHHHHHhcccChhhhhHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH--hHHHHHH
Confidence 46789999999999999999999999965 355667788999999999999999999998764 3588987 9999999
Q ss_pred HhHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12306 979 VMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRG-EGIRTLLWTFIKSFQALPYVALLIVM 1057 (1643)
Q Consensus 979 Vi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~-~~lr~Ll~tl~~S~~~L~~v~lLl~l 1057 (1643)
++++.+........ .....++.+|++|++|++|+.++. +..+.+...+.. +.+..+.+++++
T Consensus 80 ilP~~~~~~~~~~~---------------~~~~~lr~lRllRllR~~r~~~~~~~~~~~l~~~~~~--~~l~~~~~~~~~ 142 (223)
T 1orq_C 80 LVPAGLLALIEGHL---------------AGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADK--IRFYHLFGAVML 142 (223)
T ss_dssp HHHHHHHHHHHHHH---------------HTTTCHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcch---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 99988765310000 001124666777777777776633 334444444332 245555566666
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCC
Q psy12306 1058 LFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVS 1137 (1643)
Q Consensus 1058 ~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~ 1137 (1643)
+++++|++-+ .+.+- +++.+|.+++.|+...+...|+-||.++. | .
T Consensus 143 ~~~~~~~~~~-~~e~~--------~~~~~~~~~~~s~y~~~~t~tTvGyGdi~-------------------P----~-- 188 (223)
T 1orq_C 143 TVLYGAFAIY-IVEYP--------DPNSSIKSVFDALWWAVVTATTVGYGDVV-------------------P----A-- 188 (223)
T ss_dssp HHHHHHHHHH-HTTSS--------STTCSCCSHHHHHHHHHHHHTTCCCCSSC-------------------C----C--
T ss_pred HHHHHHHHHH-HHHhC--------CcCCCcCcchhHHHhHHhHHhccCCCCCC-------------------C----C--
Confidence 6666665433 32210 13457999999999999988888886531 0 0
Q ss_pred cCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhhh
Q psy12306 1138 CGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYL 1173 (1643)
Q Consensus 1138 Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~~ 1173 (1643)
++.+. .|.++.++++..++++++|.+.+.+++.
T Consensus 189 --t~~~~-~~~~~~~~~G~~~~~~~i~~i~~~~~~~ 221 (223)
T 1orq_C 189 --TPIGK-VIGIAVMLTGISALTLLIGTVSNMFQKI 221 (223)
T ss_dssp --SHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CHhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222 3556778888889999999999998753
No 20
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=99.41 E-value=1.8e-13 Score=154.27 Aligned_cols=182 Identities=12% Similarity=0.088 Sum_probs=121.5
Q ss_pred hhccccccchhhhHhHHHHHHHHHHHhhccC-CCccchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHHHHHH
Q psy12306 253 CRKAVKSQGFYWLIIILVFLNTGVLATEHYQ-QPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTME 331 (1643)
Q Consensus 253 ~~~iv~s~~F~~~i~~~IllN~i~la~e~~~-~~~~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~iF~iE 331 (1643)
++++++++.|+++++++|++|++.+++|+++ .++.....+ ...|.+|.++|++|
T Consensus 1 ~~~~~~~~~f~~~i~~lil~~~~~~~~~~~~~~~~~~~~~l-------------------------~~~d~~~~~iF~~e 55 (223)
T 1orq_C 1 IGDVMEHPLVELGVSYAALLSVIVVVVECTMQLSGEYLVRL-------------------------YLVDLILVIILWAD 55 (223)
T ss_dssp CTTTCCSHHHHTHHHHHHHHHHHHHHHHHHHHHTTCTTTHH-------------------------HHHHHHHHHHHHHH
T ss_pred ChhHHhCchHHHHHHHHHHHHHHHHHHHHhcccChhhhhHH-------------------------HHHHHHHHHHHHHH
Confidence 3678999999999999999999999998753 322222222 23577788889999
Q ss_pred HHHhhheecc-cccccccccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhch-HhHHHHHHHHHHHH
Q psy12306 332 MTLKMYSLGF-QGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYW-RSLSNLVASLLNSI 409 (1643)
Q Consensus 332 ~iLKi~a~G~-~~Yf~~~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~-~~l~~L~~ti~~s~ 409 (1643)
+++|+++.+. ++|+++ |++|+++++++.+...... .......++.+|++|++|++|+.+.. +..+.+...+..
T Consensus 56 ~~lr~~~~~~~~~y~~~--~iiDllailP~~~~~~~~~-~~~~~~~lr~lRllRllR~~r~~~~~~~~~~~l~~~~~~-- 130 (223)
T 1orq_C 56 YAYRAYKSGDPAGYVKK--TLYEIPALVPAGLLALIEG-HLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADK-- 130 (223)
T ss_dssp HHHHHHTTSCHHHHHHH--HHHHCTTHHHHHHHHHHHH-HHHTTTCHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHH--
T ss_pred HHHHHcccccHHHHHHH--hHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999875 478887 9999999999886654211 11011246777777777777776633 334444444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCC
Q psy12306 410 QSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQ 469 (1643)
Q Consensus 410 ~~l~~l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~ 469 (1643)
..+..++++++++++++|.+. +..++.- .++...+-.|++|||++|+.++++||=
T Consensus 131 ~~l~~~~~~~~~~~~~~~~~~-~~~e~~~----~~~~~~~~~~s~y~~~~t~tTvGyGdi 185 (223)
T 1orq_C 131 IRFYHLFGAVMLTVLYGAFAI-YIVEYPD----PNSSIKSVFDALWWAVVTATTVGYGDV 185 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTSSS----TTCSCCSHHHHHHHHHHHHTTCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCC----cCCCcCcchhHHHhHHhHHhccCCCCC
Confidence 346667777777777777654 4443320 111123345668888888888888773
No 21
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=99.13 E-value=1.2e-11 Score=84.34 Aligned_cols=24 Identities=79% Similarity=1.283 Sum_probs=22.2
Q ss_pred cchhhhhhhHHHHHhhhhhccccc
Q psy12306 1489 KFYATFLIQDYFRRFKKRKEQELK 1512 (1643)
Q Consensus 1489 k~y~~~~i~~~~r~~~~~~~~~~~ 1512 (1643)
||||||||||||||||||||++.+
T Consensus 1 KfYat~LIqdyfRkfkkrke~~~~ 24 (26)
T 2f3y_B 1 KFYATFLIQEYFRKFKKRKEQXXX 24 (26)
T ss_pred CcchhhhHHHHHHHHHHhHHhhcc
Confidence 899999999999999999998654
No 22
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=98.88 E-value=1.4e-09 Score=113.52 Aligned_cols=131 Identities=14% Similarity=0.154 Sum_probs=92.6
Q ss_pred hhhhhhhccccccchhhhHhHHHHHHHHHHHhhccCCCccchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHH
Q psy12306 248 RMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVAL 327 (1643)
Q Consensus 248 ~~r~~~~~iv~s~~F~~~i~~~IllN~i~la~e~~~~~~~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~i 327 (1643)
.+|+.++++++++.|++++.+++++|++++.+|+.+.-+.. . ... ...+|++|+++
T Consensus 9 ~~~~~~~~~~e~~~f~~~i~~lil~sv~~v~~et~~~i~~~-----~-~~~------------------~~~id~~~~~i 64 (147)
T 2kyh_A 9 GRVRNIGDVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGE-----Y-LVR------------------LYLVDLILVII 64 (147)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-----H-HHH------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhHhhchh-----H-HHH------------------HHHHHHHHHHH
Confidence 36777888999999999999999999999999987532210 0 011 13457889999
Q ss_pred HHHHHHHhhheecc-cccccccccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHH
Q psy12306 328 FTMEMTLKMYSLGF-QGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLL 406 (1643)
Q Consensus 328 F~iE~iLKi~a~G~-~~Yf~~~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~ 406 (1643)
|++|+++|+++.+. ++|+++ |++|+++++|.+..+..... -..+|++|++|++|++|+.|+....+.+.+++.
T Consensus 65 F~~Ey~lRl~~a~~k~~f~~~--~iiDllailP~~~~~~~~~~----lr~lRvlRllRv~Rllrl~r~~~~~~~l~~al~ 138 (147)
T 2kyh_A 65 LWADYAYRAYKSGDPAGYVKK--TLYEIPALVPAGLLALIEGH----LAGLGLFRLVRLLRFLRILLIISRGSKFLSAIA 138 (147)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH--STTTHHHHCCHHHHHHHHHH----HHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcHHHHHHH--HHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 489997 99999999988766544210 013455555556666666666555555555554
Q ss_pred HH
Q psy12306 407 NS 408 (1643)
Q Consensus 407 ~s 408 (1643)
+-
T Consensus 139 ~f 140 (147)
T 2kyh_A 139 DA 140 (147)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 23
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E
Probab=98.82 E-value=9.6e-10 Score=98.89 Aligned_cols=38 Identities=68% Similarity=1.256 Sum_probs=26.2
Q ss_pred hhhhhcCCCCCCCCCCccccccccccccccchhhhhhhHHHHHhhhhhc
Q psy12306 1460 TLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKE 1508 (1643)
Q Consensus 1460 ~ll~~~~~plg~gk~cp~r~a~~~~~tvgk~y~~~~i~~~~r~~~~~~~ 1508 (1643)
++|+.+-||-+ .+|+|||||||++|||||||+||+||+
T Consensus 44 k~lD~lvpp~~-----------~~~lTVGKiYA~llI~d~~r~~k~r~~ 81 (81)
T 3g43_E 44 KLLDQVVPPAG-----------DDEVTVGKFYATFLIQEYFRKFKKREQ 81 (81)
T ss_dssp HHHHHCC-------------------CCCCHHHHHHHHHHHHHHHTC--
T ss_pred hhcccccCCCC-----------CCcEeehHHHHHHHHHHHHHHHHhccC
Confidence 57788888854 489999999999999999999999984
No 24
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=98.80 E-value=8.8e-10 Score=74.39 Aligned_cols=22 Identities=41% Similarity=0.859 Sum_probs=20.8
Q ss_pred ccccchhhhhhhHHHHHhhhhh...
Q psy12306 1486 TVGKFYATFLIQDYFRRFKKRK... 1507 (1643)
Q Consensus 1486 tvgk~y~~~~i~~~~r~~~~~~... 1507 (1643)
.|||||||+|||||||+||+||
T Consensus 2 ~VGKiYA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 2 HMGKIYAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTC...
T ss_pred chHHHHHHHHHHHHHHHHhccC...
Confidence 5999999999999999999986
No 25
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=98.77 E-value=1.2e-09 Score=114.05 Aligned_cols=127 Identities=9% Similarity=0.163 Sum_probs=93.9
Q ss_pred cccceeeeeeeccchhhhhhHHHHhhhheeeeeecc-CChhHHHHHHHHhHHHHHHHHHHHHHHhhhcc-cccccccccc
Q psy12306 895 RLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYR-QPLFYADILDKMNMFFTTVFALEFVFKLAAFR-FKNYFSDAWN 972 (1643)
Q Consensus 895 ~~r~~~~~iv~s~~Fe~~I~~lIllN~i~la~e~~~-~~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g-~~~Yf~~~wN 972 (1643)
.+|.+++++++++.|++++.++|++|.+.+.+++.. .+..+...+..++.+++++|++|+++|+++.. .++|+++ |
T Consensus 9 ~~~~~~~~~~e~~~f~~~i~~lil~sv~~v~~et~~~i~~~~~~~~~~id~~~~~iF~~Ey~lRl~~a~~k~~f~~~--~ 86 (147)
T 2kyh_A 9 GRVRNIGDVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVKK--T 86 (147)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH--S
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHH--H
Confidence 467788899999999999999999999999999764 45556778999999999999999999997764 4589997 9
Q ss_pred eeehhhHhHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHH
Q psy12306 973 VFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTF 1041 (1643)
Q Consensus 973 ifDfivVi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl 1041 (1643)
++|++.+++....+..+ .....+|++|++|++|++|+.+..+..+.+..++
T Consensus 87 iiDllailP~~~~~~~~------------------~~lr~lRvlRllRv~Rllrl~r~~~~~~~l~~al 137 (147)
T 2kyh_A 87 LYEIPALVPAGLLALIE------------------GHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAI 137 (147)
T ss_dssp TTTHHHHCCHHHHHHHH------------------HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888776554320 0112244555555555566655555445554443
No 26
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=98.65 E-value=4e-09 Score=71.11 Aligned_cols=23 Identities=30% Similarity=0.764 Sum_probs=21.2
Q ss_pred ccccchhhhhhhHHHHHhhhhhc...
Q psy12306 1486 TVGKFYATFLIQDYFRRFKKRKE... 1508 (1643)
Q Consensus 1486 tvgk~y~~~~i~~~~r~~~~~~~... 1508 (1643)
.|||+||++|||||||++|+||+
T Consensus 1 ~VGKiYAallI~d~~r~~k~~~~... 23 (23)
T 3dve_B 1 HMGKVYAALMIFDFYKQNKTSRDxxx 26 (26)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCC...
T ss_pred ChHHHHHHHHHHHHHHHHhhccC...
Confidence 48999999999999999999874
No 27
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=98.33 E-value=2.2e-07 Score=69.39 Aligned_cols=31 Identities=81% Similarity=1.233 Sum_probs=27.1
Q ss_pred CcceeehhHHHHHHHHHHHHHHHHHHHHhhh
Q psy12306 1302 EEEVTVGKFYATFLIQDYFRRFKKRKEQELK 1332 (1643)
Q Consensus 1302 ~~~~tv~~~~a~~~I~~~fr~f~~~~~~~~~ 1332 (1643)
++++|||+|||+++||++||+|++++|+++.
T Consensus 3 ~devTVGKfYatfLIQdyFRkfkkrke~~~~ 33 (37)
T 2be6_D 3 MDEVTVGKFYATFLIQEYFRKFKKRKEQGLV 33 (37)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcceeeehHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999998753
No 28
>1qg9_A Protein (sodium channel protein, brain II alpha subunit); transmembrane sodium channel, structure, transmembrane channel; NMR {Synthetic} SCOP: j.35.1.1
Probab=97.91 E-value=2e-06 Score=60.89 Aligned_cols=24 Identities=42% Similarity=0.652 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhcccc
Q psy12306 38 IEYIFLVIFTVECVMKILAYGFVA 61 (1643)
Q Consensus 38 ~E~iF~~iFt~E~~lKiiA~Gf~~ 61 (1643)
+|++|++|||+|+++|++|+||++
T Consensus 2 ~e~~F~~IYtfE~liKi~ArGf~~ 25 (26)
T 1qg9_A 2 VEYTFTGIYTFESLIKILARXXXX 25 (26)
T ss_dssp CSCCHHHHHHHHHHHHHHTC----
T ss_pred ceEEeeHHHHHHHHHHHHHhhhcC
Confidence 588999999999999999999985
No 29
>4dey_B Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 1vyt_E
Probab=97.88 E-value=3.8e-06 Score=79.34 Aligned_cols=48 Identities=90% Similarity=1.364 Sum_probs=28.7
Q ss_pred HhhhHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhhhcccccCCchh
Q psy12306 154 SGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGE 201 (1643)
Q Consensus 154 ~~~F~~er~k~~~r~~f~~l~~~~q~~~~l~~~~~~~~~~~~~~~~~~ 201 (1643)
+++|++||+|++.|++|+|+|++||++++++||++|+++++++.++.+
T Consensus 2 SGEFsKEREk~~~R~~f~Klre~qq~e~~l~GYl~WI~~aE~i~~~~~ 49 (106)
T 4dey_B 2 SGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENE 49 (106)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 468999999999999999999999999999999999999999886654
No 30
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=97.87 E-value=3.8e-06 Score=58.00 Aligned_cols=22 Identities=36% Similarity=0.795 Sum_probs=20.7
Q ss_pred cchhhhhhhHHHHHhhhhhccc
Q psy12306 1489 KFYATFLIQDYFRRFKKRKEQE 1510 (1643)
Q Consensus 1489 k~y~~~~i~~~~r~~~~~~~~~ 1510 (1643)
|+||++||+||||++|+|||+.
T Consensus 1 KvYAa~mI~e~yrq~K~~r~q~ 22 (26)
T 3bxl_B 1 KIYAAMMIMDYYKQSKVKKQRX 22 (26)
T ss_pred ChhHHHHHHHHHHHHHhhhhhc
Confidence 7999999999999999999874
No 31
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens}
Probab=97.68 E-value=1.3e-05 Score=58.42 Aligned_cols=27 Identities=59% Similarity=0.831 Sum_probs=24.7
Q ss_pred chhHHHHHHHhhhhhhhhhhhcccChh
Q psy12306 642 AIAFVKILRVLRVLRPLRAINRAKGLK 668 (1643)
Q Consensus 642 ~ls~lr~lR~lRvLRpLR~i~~~~~lk 668 (1643)
+++.++++|++|+|||||+++++||||
T Consensus 2 ~~~~l~~lrtlR~LRpLr~isr~~gmk 28 (28)
T 2lcm_A 2 DINTIKSLRVLRVLRPLKTIKRLPKLK 28 (28)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred CcchhhHHHHHHHhcchHHHhhcccCC
Confidence 457789999999999999999999986
No 32
>4dex_B Voltage-dependent N-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 2.00A {Rattus norvegicus}
Probab=97.35 E-value=6.4e-05 Score=71.63 Aligned_cols=45 Identities=51% Similarity=0.886 Sum_probs=36.5
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhhhcccccCCc
Q psy12306 155 GEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPE 199 (1643)
Q Consensus 155 ~~F~~er~k~~~r~~f~~l~~~~q~~~~l~~~~~~~~~~~~~~~~ 199 (1643)
++|++||+++..|.+|++++++||++++++||++|+.+++++...
T Consensus 2 GEFaKERErve~R~~F~KlR~~qq~e~~l~GYl~WI~kAEev~l~ 46 (113)
T 4dex_B 2 SEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLA 46 (113)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 579999999999999999999999999999999999999887543
No 33
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=97.12 E-value=0.0002 Score=49.43 Aligned_cols=23 Identities=83% Similarity=1.349 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q psy12306 1309 KFYATFLIQDYFRRFKKRKEQEL 1331 (1643)
Q Consensus 1309 ~~~a~~~I~~~fr~f~~~~~~~~ 1331 (1643)
+|||+++||++||+|+++++.++
T Consensus 1 KfYat~LIqdyfRkfkkrke~~~ 23 (26)
T 2f3y_B 1 KFYATFLIQEYFRKFKKRKEQXX 23 (26)
T ss_pred CcchhhhHHHHHHHHHHhHHhhc
Confidence 58999999999999999998864
No 34
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=96.92 E-value=0.00037 Score=73.36 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=31.7
Q ss_pred cccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12306 348 LFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFA 427 (1643)
Q Consensus 348 ~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l~~l~lll~l~i~iFA 427 (1643)
.+|+.|++.+++. +|++|.+|++|++ +.|+...++. +.+...+++++++++++|
T Consensus 14 ~~~~~dli~~lp~----------------lr~lRllRi~ril-l~r~~~~l~~---------~~~~~~~~~~~~~i~~~a 67 (155)
T 2a9h_A 14 IEGRGRLIKHMPP----------------MLSGLLARLVKLL-LGRHGSALHW---------RAAGAATVLLVIVLLAGS 67 (155)
T ss_dssp -------------------------------------------------CCHH---------HHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH----------------HHHHHHHHHHHHH-HHHHHHHHHH---------HHHHHHHHHHHHHHHHHH
Confidence 4567787765542 4556666666666 5555322221 112222333334444555
Q ss_pred HHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCCC
Q psy12306 428 LLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 428 ilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w~ 471 (1643)
.+ +...++.. ++....+-+|++|||++|+.++.+||=.+
T Consensus 68 ~~-~~~~E~~~----~~~~~~s~~~a~y~s~vTltTVGYGDi~P 106 (155)
T 2a9h_A 68 YL-AVLAERGA----PGAALISYPDALWWSVETATTVGYGDLYP 106 (155)
T ss_dssp HH-HHHHHTTS----SCSSTTSHHHHHHHHHHHHTTCCCSSSCC
T ss_pred HH-HHHHhccC----CCCccCcccceeheeeeeeecccCCCCCC
Confidence 44 44443321 11122345678999999999999998543
No 35
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=96.81 E-value=0.00049 Score=46.93 Aligned_cols=20 Identities=40% Similarity=0.896 Sum_probs=18.7
Q ss_pred ehhHHHHHHHHHHHHHHHHH
Q psy12306 1307 VGKFYATFLIQDYFRRFKKR 1326 (1643)
Q Consensus 1307 v~~~~a~~~I~~~fr~f~~~ 1326 (1643)
|||+||+++||++||+++++
T Consensus 3 VGKiYA~llI~d~~r~~k~r 22 (23)
T 3dvk_B 3 MGKIYAAMMIMDYYKQSKVK 22 (26)
T ss_dssp CHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999875
No 36
>1qg9_A Protein (sodium channel protein, brain II alpha subunit); transmembrane sodium channel, structure, transmembrane channel; NMR {Synthetic} SCOP: j.35.1.1
Probab=96.08 E-value=0.0005 Score=48.86 Aligned_cols=24 Identities=29% Similarity=0.510 Sum_probs=19.0
Q ss_pred hhchhhhHhhhhhheeeEEEecee
Q psy12306 588 FDNFFTAVFTIEILLKIISYGFIL 611 (1643)
Q Consensus 588 ~d~ift~iF~iE~~lKiia~G~~~ 611 (1643)
.+++|++||++|+++|++|.||++
T Consensus 2 ~e~~F~~IYtfE~liKi~ArGf~~ 25 (26)
T 1qg9_A 2 VEYTFTGIYTFESLIKILARXXXX 25 (26)
T ss_dssp CSCCHHHHHHHHHHHHHHTC----
T ss_pred ceEEeeHHHHHHHHHHHHHhhhcC
Confidence 478999999999999999999964
No 37
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=96.02 E-value=0.00092 Score=45.54 Aligned_cols=21 Identities=33% Similarity=0.798 Sum_probs=18.5
Q ss_pred ehhHHHHHHHHHHHHHHHHHH
Q psy12306 1307 VGKFYATFLIQDYFRRFKKRK 1327 (1643)
Q Consensus 1307 v~~~~a~~~I~~~fr~f~~~~ 1327 (1643)
|||+|||++||++||++++++
T Consensus 2 VGKiYAallI~d~~r~~k~~~ 22 (23)
T 3dve_B 2 MGKVYAALMIFDFYKQNKTSR 22 (26)
T ss_dssp CHHHHHHHHHHHHHHHTCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhcc
Confidence 799999999999999987643
No 38
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=95.92 E-value=0.0032 Score=63.46 Aligned_cols=80 Identities=11% Similarity=0.032 Sum_probs=31.2
Q ss_pred chhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhh
Q psy12306 377 VSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQ 456 (1643)
Q Consensus 377 l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l~~l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~ 456 (1643)
+|++|.+|++|++ +.|+...++. . .+...++.++++++++|.+ +...++.. +++...+-+|++|+
T Consensus 4 lr~lRl~Ri~ri~-L~R~~~~l~~-------~--~~~~~~~~~~~~~~~~a~~-~~~~E~~~----~~~~~~~~~~a~y~ 68 (122)
T 2ih3_C 4 MLSGLLARLVKLL-LGRHGSALHW-------R--AAGAATVLLVIVLLAGSYL-AVLAERGA----PGAQLITYPRALWW 68 (122)
T ss_dssp ---------------------CHH-------H--HHHHHHHHHHHHHHHHHHH-HHHHHTTS----TTCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhHHHHHH-------H--HHHHHHHHHHHHHHHHHHh-hheeeecC----CCCccCccccchhh
Confidence 4566666666666 5565222211 1 1222223333444444444 44443321 11222345688999
Q ss_pred hhhhheecccCCCCC
Q psy12306 457 SLLTVFQQEQKGQEE 471 (1643)
Q Consensus 457 A~vTlF~iltge~w~ 471 (1643)
|++|+.++.+||=.+
T Consensus 69 ~~~T~tTvGyGDi~P 83 (122)
T 2ih3_C 69 ACETATTVAYGDLYP 83 (122)
T ss_dssp HHHHHTTCCCSSSCC
T ss_pred eeeeeeeeecCCCCC
Confidence 999999999998543
No 39
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=95.59 E-value=0.0069 Score=63.64 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=38.1
Q ss_pred CCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCCcCcceeeeeeehhhHHHHHHHHHHHH
Q psy12306 1084 NNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFV 1163 (1643)
Q Consensus 1084 ~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~Cgs~~a~iyFisf~ii~~fiilNLfV 1163 (1643)
+.+|.+++.|+.--+...|.=|..|+. | . ++.+. .|.++++++...++-+++
T Consensus 79 ~~~~~s~~~a~y~s~vTltTVGYGDi~-------------------P----~----t~~gr-~~~~~~~l~Gv~~~a~~~ 130 (155)
T 2a9h_A 79 GAALISYPDALWWSVETATTVGYGDLY-------------------P----V----TLWGR-CVAVVVMVAGITSYGLVF 130 (155)
T ss_dssp CSSTTSHHHHHHHHHHHHTTCCCSSSC-------------------C----C----SHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCccCcccceeheeeeeeecccCCCCC-------------------C----C----ChhHH-HHHHHHHHHHHHHHHHHH
Confidence 457888888876655544444333210 1 0 11222 344567777778888999
Q ss_pred HHHHHhhhhh
Q psy12306 1164 AVIMDNFDYL 1173 (1643)
Q Consensus 1164 AvIidnF~~~ 1173 (1643)
+.+...|...
T Consensus 131 ~~i~~~~~~~ 140 (155)
T 2a9h_A 131 AAVATWFVGR 140 (155)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 40
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=95.31 E-value=0.01 Score=41.32 Aligned_cols=22 Identities=36% Similarity=0.795 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q psy12306 1309 KFYATFLIQDYFRRFKKRKEQE 1330 (1643)
Q Consensus 1309 ~~~a~~~I~~~fr~f~~~~~~~ 1330 (1643)
|+|||++|+++||+++++++|.
T Consensus 1 KvYAa~mI~e~yrq~K~~r~q~ 22 (26)
T 3bxl_B 1 KIYAAMMIMDYYKQSKVKKQRX 22 (26)
T ss_pred ChhHHHHHHHHHHHHHhhhhhc
Confidence 5799999999999999999874
No 41
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=93.85 E-value=0.046 Score=55.01 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=20.4
Q ss_pred eehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy12306 1147 FISFYVLCSFLIINLFVAVIMDNFDYLTR 1175 (1643)
Q Consensus 1147 Fisf~ii~~fiilNLfVAvIidnF~~~~~ 1175 (1643)
+.+++++....++-+.+|.+.+.+.+..+
T Consensus 91 ~~~~~~~~Gi~~~~~~~~~i~~~~~~~~~ 119 (122)
T 2ih3_C 91 VAVVVMVAGITSFGLVTAALATWFVGREQ 119 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456667777788888888888875433
No 42
>1byy_A Protein (sodium channel alpha-subunit); membrane protein; NMR {Rattus norvegicus} SCOP: j.12.1.1
Probab=89.03 E-value=0.1 Score=44.23 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=13.5
Q ss_pred Hhhhchhhhhh-hccccchhhhhHHHH---hhhcCCCccc-cCcccccceeee
Q psy12306 855 VTFQNEGEQEY-KNCELDKNQRNCIEF---ALKAKPVRRY-IPKQRLQYKIWW 902 (1643)
Q Consensus 855 ~~F~~~~e~~~-~~~~l~k~q~~~~~~---~~~~kp~~~~-~P~~~~r~~~~~ 902 (1643)
|||++++++.. .+..+|++|++|.+. +...+|.++. .|++++|..+|+
T Consensus 1 dnFn~~k~k~gg~~~fmT~~Qkk~y~amkkl~~~kP~k~i~rP~nk~q~~v~d 53 (53)
T 1byy_A 1 DNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFD 53 (53)
T ss_dssp ------------CCSCCCHHHHHHHHHHHTSCC--------------------
T ss_pred CcHHHHHHHhcCCccccCHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHhcC
Confidence 57887665432 356889999999875 3455676654 478888887764
No 43
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=80.04 E-value=5.4 Score=36.02 Aligned_cols=70 Identities=13% Similarity=0.273 Sum_probs=50.8
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++.+++.+++..||.+++|+|...++...++.+..++ + ......+. .++ .+.+|+|.|.+.+-.+.
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~~~~~~d--~~~~g~i~~~eF~~~~~ 77 (85)
T 2ktg_A 7 VLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANP------T-KQKISEIVKDYD--KDNSGKFDQETFLTIML 77 (85)
T ss_dssp SSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCC------C-HHHHHHHHHHHS--SSSCSEEEHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC------C-HHHHHHHHHHhC--CCCCCcCcHHHHHHHHH
Confidence 46678889999999999999999999999999998875432 1 12223333 222 35788999988765554
No 44
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens}
Probab=79.78 E-value=0.43 Score=34.88 Aligned_cols=23 Identities=35% Similarity=0.486 Sum_probs=19.7
Q ss_pred cchhhHHHHHhHhhhhhhchHhH
Q psy12306 376 GVSVLRCVRLLRVFKVTKYWRSL 398 (1643)
Q Consensus 376 ~l~vLR~~RlLRi~kl~r~~~~l 398 (1643)
.++.+|.+|++|++|.+..+++|
T Consensus 5 ~l~~lrtlR~LRpLr~isr~~gm 27 (28)
T 2lcm_A 5 TIKSLRVLRVLRPLKTIKRLPKL 27 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSC
T ss_pred hhhHHHHHHHhcchHHHhhcccC
Confidence 47889999999999999888775
No 45
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=78.24 E-value=4.4 Score=35.76 Aligned_cols=68 Identities=13% Similarity=0.223 Sum_probs=48.2
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++.+++.+++..||++++|.|...++...++.+..++ .....+.+... +-.+.+|+|.|.+.+-.+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~~~~~-~d~~~~g~i~~~eF~~~~ 69 (77)
T 2joj_A 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDV-------KKPEILELMNE-YDREGNGYIGFDDFLDIM 69 (77)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCC-------HHHHHHHHHHH-HCCSSSSEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCC-------CHHHHHHHHHH-HCCCCCCcCcHHHHHHHH
Confidence 456678889999999999999999999999999875432 12222333321 124578899998876554
No 46
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=78.17 E-value=5.6 Score=36.51 Aligned_cols=70 Identities=20% Similarity=0.380 Sum_probs=50.9
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++.+++.+++..||++++|+|...++..+++.+..++. ....+.+. .++ .+.+|+|.|.+.+-.+.
T Consensus 13 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-------~~~~~~l~~~~D--~~~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-------KEELDAIIEEVD--EDGSGTIDFEEFLVMMV 83 (90)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-------HHHHHHHHHHHC--TTCCSSEEHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHHHhC--CCCCCeEeHHHHHHHHH
Confidence 356778889999999999999999999999999998754321 12223333 222 35788999988765554
No 47
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=77.77 E-value=3.6 Score=39.37 Aligned_cols=67 Identities=18% Similarity=0.278 Sum_probs=49.6
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l 1253 (1643)
.+++++.++++++...||.+++|+|...++...++.+..++.-. .++.+... +-.+.+|+|.|.+.+
T Consensus 29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~-------ei~~l~~~-~D~d~dG~I~~~EF~ 95 (100)
T 2lv7_A 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEV-------ELEVIIQR-LDMDGDGQVDFEEFV 95 (100)
T ss_dssp CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTT-------THHHHHHH-HCSSCSSSBCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHH-------HHHHHHHH-HCCCCCCeEeHHHHH
Confidence 46778899999999999999999999999999999986544221 12233221 224678899988764
No 48
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=76.92 E-value=12 Score=34.28 Aligned_cols=70 Identities=14% Similarity=0.297 Sum_probs=49.9
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+++..+++.+++..||++++|+|...++..+++.+..++ + ...+..+... +..+.+|+|.|.+.+-.+.+
T Consensus 4 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~l~~~-~d~~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL------T-DEEVEQMIKE-ADLDGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC------C-HHHHHHHHHH-HCSSCCSSEEHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCcEeHHHHHHHHHh
Confidence 455677889999999999999999999999999875433 1 1222333321 23467899999988765543
No 49
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=75.37 E-value=2.4 Score=31.64 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q psy12306 1308 GKFYATFLIQDYFRRFKKRKE 1328 (1643)
Q Consensus 1308 ~~~~a~~~I~~~fr~f~~~~~ 1328 (1643)
.+-++|.+||++||.++.++.
T Consensus 4 ~Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 4 SEEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999999998764
No 50
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=75.21 E-value=8.1 Score=36.01 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=49.0
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++.+++.++...||.+++|+|...++..+++++.. +. ..+..+... .-.+.+|+|.|.+.+.++.
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~--------~~-~~~~~i~~~-~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--------PI-LELSHIWEL-SDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS--------CH-HHHHHHHHH-HCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC--------CH-HHHHHHHHH-HCCCCCCCCCHHHHHHHHH
Confidence 35667889999999999999999999999999988632 11 122333321 2346789999998766553
No 51
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=74.15 E-value=7.6 Score=40.20 Aligned_cols=67 Identities=16% Similarity=0.425 Sum_probs=50.0
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..++..+++..||++++|+|...++...+..+..|+. ...+..+ ..++..-+.+|+|.|.+.+-.+.
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls-------~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~ 150 (159)
T 3i5g_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERIT-------EDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp CHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCC-------HHHHHHHHHHTTCCCCSSCCEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHHHhCcCCCCCCeEeHHHHHHHHH
Confidence 3456778899999999999999999999998876542 1223344 34566667889999998866554
No 52
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=73.55 E-value=7.9 Score=35.05 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=51.1
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHH---HHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVA---CKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~---~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
.+++++.+++.+++..||.+++|+|...++...++.+..++ + ... +..+.. .+..+.+|+|.| +.+-.
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~~~~-~~d~~~~g~i~~-eF~~~ 77 (86)
T 1j7q_A 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTY------T-KRETEAIMKEAR-GPKGDKKNIGPE-EWLTL 77 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCC------S-HHHHHHHHHHHH-CSSCSSCCBCTT-HHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC------C-HHHHHHHHHHHH-HhCCCCCCcCCH-HHHHH
Confidence 46778899999999999999999999999999999875432 1 122 334332 234567889999 87655
Q ss_pred HH
Q psy12306 1256 VV 1257 (1643)
Q Consensus 1256 l~ 1257 (1643)
+.
T Consensus 78 ~~ 79 (86)
T 1j7q_A 78 CS 79 (86)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 53
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=73.46 E-value=7.1 Score=35.33 Aligned_cols=68 Identities=15% Similarity=0.358 Sum_probs=48.9
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++.++..+.+..||.+++|+|...++...++.+. ++ + ......+. .++ .+.+|+|.|.+.+-.+.
T Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~------~-~~~~~~~~~~~D--~~~dg~i~~~eF~~~~~ 73 (86)
T 2opo_A 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SV------T-PDEVRRMMAEID--TDGDGFISFDEFTDFAR 73 (86)
T ss_dssp -CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TC------C-HHHHHHHHHHHC--TTCSSEECHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CC------C-HHHHHHHHHHhC--CCCCCcCcHHHHHHHHH
Confidence 5667788999999999999999999999999998864 22 1 12223332 322 46789999988766554
No 54
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=70.91 E-value=2.7 Score=30.41 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q psy12306 1308 GKFYATFLIQDYFRRFKKRK 1327 (1643)
Q Consensus 1308 ~~~~a~~~I~~~fr~f~~~~ 1327 (1643)
.+-++|.+||++||.|..++
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 35689999999999998764
No 55
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=68.11 E-value=12 Score=35.10 Aligned_cols=68 Identities=16% Similarity=0.258 Sum_probs=49.0
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++.+++.++...||.+++|+|...++..+++++. . +. ...+.+... .-.+.+|+|.|.+.+-++.
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g----~----~~-~~~~~i~~~-~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG----L----PS-TLLAHIWSL-CDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT----C----CH-HHHHHHHHH-HCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC----C----CH-HHHHHHHHH-HCCCCCCcCCHHHHHHHHH
Confidence 4677889999999999999999999999999998863 2 11 223333322 2246788999888765554
No 56
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=67.04 E-value=7.3 Score=37.48 Aligned_cols=51 Identities=16% Similarity=-0.060 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCC
Q psy12306 415 LLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQE 470 (1643)
Q Consensus 415 l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w 470 (1643)
.+++++++++++|.+-+.+.+.. + .....+-.|.+|+|++|+.++.+||=-
T Consensus 11 ~~~~~~~~~~~~a~~~~~~E~~~-~----~~~~~~~~~a~y~~~~T~tTvGyGDi~ 61 (103)
T 2k1e_A 11 AEEELQKVLEEASKKAVEAERGA-P----GAALISYPDAIWWSVETATTVGYGDRY 61 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS-T----TCCCCCGGGTTTTTTGGGGCCSCCSSC
T ss_pred HHHHHHHHHHHHHHhhhhhccCC-C----CcccccHHHHHHHHHHHHhcccCCCCC
Confidence 33444445555555544443321 1 122345678999999999999999853
No 57
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=66.11 E-value=18 Score=31.02 Aligned_cols=64 Identities=17% Similarity=0.356 Sum_probs=44.5
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
..+++.+.+..+|++++|.|...++..+++.+..++ + ...+..+... +..+.+|+|.|.+.+-.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~------~-~~~~~~~~~~-~d~~~~g~i~~~eF~~~ 67 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPL------P-QEELDAMIRE-ADVDQDGRVNYEEFARM 67 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSS------C-HHHHHHHHHH-CCSSSSSEEETTHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCcCcHHHHHHH
Confidence 346778889999999999999999999998875432 1 1223333322 23467889998876543
No 58
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=65.26 E-value=12 Score=31.70 Aligned_cols=61 Identities=10% Similarity=0.241 Sum_probs=41.9
Q ss_pred HHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1188 FIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1188 f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
..+++..+|++++|.|...++...++.+..++ + ...+..+... +..+.+|+|.|.+..-.+
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~------~-~~~~~~~~~~-~D~~~dg~i~~~ef~~~~ 63 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYF------T-QEDIVKFFEE-IDVDGNGELNADEFTSCI 63 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTS------C-HHHHHHHHHH-HCCSSSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC------C-HHHHHHHHHH-HCCCCCCcCcHHHHHHHH
Confidence 45778889999999999999999999876543 1 1222233221 224678899988876554
No 59
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}
Probab=61.89 E-value=5.8 Score=40.85 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCCC
Q psy12306 415 LLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 415 l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w~ 471 (1643)
+.+++++++++++.+++....+ .+-+|.+|+|++|+.++.+||=.+
T Consensus 29 ~~~~~~~~~~~~g~~~~~~~e~-----------~~~~~a~y~~~~t~tTvGyGd~~p 74 (148)
T 3vou_A 29 VLFVLTFLTLTSGTIFYSTVEG-----------LRPLDALYFSVVTLTTVGDGNFSP 74 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSC-----------CCHHHHHHHHHHHHTTCCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHccCCCCCCC
Confidence 3444455556667776664433 234589999999999999998544
No 60
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=61.87 E-value=6.3 Score=38.78 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCCC
Q psy12306 417 LLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 417 lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w~ 471 (1643)
+++++++++++.+++....+ .+-+|++|+|++|+.++.+||--+
T Consensus 28 ~~~~~~~~~~g~~~~~~~e~-----------~~~~~a~y~~~~T~tTvGyGdi~P 71 (114)
T 2q67_A 28 FVLTILTLISGTIFYSTVEG-----------LRPIDALYFSVVTLTTVGAGNFSP 71 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHSC-----------CCHHHHHHHHHHHHTSCCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHhcceeCCCCcc
Confidence 34444555667777665543 134589999999999999998543
No 61
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=61.83 E-value=18 Score=35.67 Aligned_cols=71 Identities=17% Similarity=0.325 Sum_probs=51.4
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++.++.++.+.|..+|++++|.|...++..+++.+..++ ....+..+... +-.+.+|.|.|.+.+-.+.
T Consensus 4 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~l~~~-~d~~~~g~i~~~ef~~~~~ 74 (147)
T 4ds7_A 4 NLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSP-------SEAEVADLMNE-IDVDGNHAIEFSEFLALMS 74 (147)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HCTTSSSEEEHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCC-------CHHHHHHHHHH-hccCCCCcCcHHHHHHHHH
Confidence 46778899999999999999999999999999998875532 12222333321 1245788999988766554
No 62
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=61.68 E-value=11 Score=36.68 Aligned_cols=71 Identities=10% Similarity=0.099 Sum_probs=50.7
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
.+++++.+++.++...||.+++|+|...++..+++++. ..... +..+... .-.+.+|+|.|.+.+.++..
T Consensus 15 ~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g----l~~~e-----l~~i~~~-~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK----LSIPE-----LSYIWEL-SDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS----CSSCC-----HHHHHHH-HCSSSCSEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC----CCHHH-----HHHHHHH-HcCCCCCcCcHHHHHHHHHH
Confidence 46778899999999999999999999999999887753 22211 1222221 22467899999988766543
Q ss_pred h
Q psy12306 1259 T 1259 (1643)
Q Consensus 1259 ~ 1259 (1643)
.
T Consensus 85 ~ 85 (110)
T 1iq3_A 85 I 85 (110)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=61.39 E-value=18 Score=34.32 Aligned_cols=67 Identities=22% Similarity=0.401 Sum_probs=48.3
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++.+++.+++..||++++|.|...++...++.+..++. ...+..+... +..+.+|+|.|.+.+-.+
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-------~~~~~~l~~~-~D~d~dg~i~~~eF~~~~ 94 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKT-------HLELKKLIGE-VSSGSGETFSYPDFLRMM 94 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCC-------HHHHHHHHHH-HCSSSSSEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHHH-hCCCCCCeEcHHHHHHHH
Confidence 577888999999999999999999999999998754321 1222333221 234678899998876544
No 64
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=61.17 E-value=5.4 Score=40.56 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCCC
Q psy12306 410 QSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 410 ~~l~~l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w~ 471 (1643)
+.+...+++++++++++|.+.+.+-++. .+....+-+|+++++++|+.++.+||=.+
T Consensus 6 r~~~~~~~~~~~~~~~~a~~~~~~e~~~-----~~~~~~~~~~a~yf~~~T~tTvGyGd~~P 62 (139)
T 3eff_K 6 RAAGAATVLLVIVLLAGSYLAVLAERGA-----PGAQLITYPRALWWSVETATTVGYGDLYP 62 (139)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHTTSSC-----TTCCCCCHHHHHHHHHHHHTTCCCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCcccCCHHHHHHHHheeeecccCCCCcC
Confidence 4445555566666666665554443322 11223445688999999999999999544
No 65
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=59.26 E-value=20 Score=36.56 Aligned_cols=72 Identities=18% Similarity=0.280 Sum_probs=52.1
Q ss_pred ccCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1178 SILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1178 ~~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..+++.+.+++.+.+..+|++++|.|...++..+++.+..++ ....+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-------~~~~~~~~~~~-~d~~~~g~i~~~eF~~~~~ 91 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-------KKEEIKKMISE-IDKDGSGTIDFEEFLTMMT 91 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCC-------CHHHHHHHHHH-HCSSSSSSEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hcCCCCCcCCHHHHHHHHH
Confidence 356778899999999999999999999999999998875432 12223333321 1245788999988765554
No 66
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=59.18 E-value=22 Score=34.31 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=49.4
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+++++.+++.+++..+|+ ++|+|...++..+++++.. +. .....+... .-.+.+|++.|.+.+.++..
T Consensus 9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl--------~~-~el~~i~~~-~D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKL--------PV-DILGRVWEL-SDIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTC--------CH-HHHHHHHHH-HCSSCSSBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCC--------CH-HHHHHHHHH-HcCCCCCcCcHHHHHHHHHH
Confidence 567889999999999999 9999999999999987632 11 223333322 22467899999887666543
No 67
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=59.07 E-value=18 Score=32.23 Aligned_cols=69 Identities=20% Similarity=0.280 Sum_probs=46.1
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcC--CCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKIS--PPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~--~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l 1253 (1643)
++...++..+.+..||.+++|+|...++...+..+. .++.-.. .......+.. .+-.+.+|.|.|.+.+
T Consensus 2 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~---~~~~~~~~~~-~~D~~~dg~I~~~eF~ 72 (83)
T 1yx7_A 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDK---VKEASAKLIK-MADKNSDGKISKEEFL 72 (83)
T ss_dssp CSCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTT---THHHHHHHHT-TTCSSSCSCCSHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHH---HHHHHHHHHH-HhCCCCCCCCcHHHHH
Confidence 345567788899999999999999999999999886 4332211 1111112332 2234678889888776
No 68
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=58.93 E-value=15 Score=36.94 Aligned_cols=70 Identities=19% Similarity=0.333 Sum_probs=49.7
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++.++++++..+|.+++|.|...++..+++.+..+. .......+.. ....+.+|.+.|.+.+-.+
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~-------~~~~~~~~~~-~~d~~~~g~i~~~ef~~~~ 72 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNP-------TEAELQDLIA-EAENNNNGQLNFTEFCGIM 72 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCC-------CHHHHHHHHH-HHHTTSTTEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCc-------hHHHHHHHHH-hcccCCCCcccHHHHHHHH
Confidence 36788999999999999999999999999999999876532 1111222221 1234567888887765444
No 69
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=58.23 E-value=29 Score=33.60 Aligned_cols=68 Identities=13% Similarity=0.261 Sum_probs=47.9
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++.+++.+++..||.+++|+|...++..+++.. +. + ...+..+... +-.+.+|+|.|.+.+-++.
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~----~~----~-~~~~~~i~~~-~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQS----SL----P-QAQLASIWNL-SDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTT----CC----C-HHHHHHHHHH-HCSSCCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhC----CC----C-HHHHHHHHHH-HCCCCCCCCcHHHHHHHHH
Confidence 566778899999999999999999999999988731 11 1 1223333322 2246789999988765553
No 70
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=58.17 E-value=8 Score=34.99 Aligned_cols=66 Identities=18% Similarity=0.328 Sum_probs=45.0
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l 1253 (1643)
+++++.++..+++..||++++|+|...++...++.+..++. ......+... +-.+.+|+|.|.+.+
T Consensus 17 l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-------~~~~~~l~~~-~d~~~~g~i~~~eF~ 82 (87)
T 1s6j_A 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM-------ESEIKDLMDA-ADIDKSGTIDYGEFI 82 (87)
T ss_dssp SCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCC-------HHHHHHHHHH-HCTTCSSEECHHHHT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHHH-hCCCCCCcCcHHHHH
Confidence 44556667778889999999999999999999988765431 1222333221 124577888887653
No 71
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=57.48 E-value=27 Score=35.09 Aligned_cols=71 Identities=20% Similarity=0.352 Sum_probs=51.6
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++++++.+++..+|.+++|.|...++..+++.+..++. ...+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 13 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-------~~~~~~~~~~-~d~~~~g~i~~~ef~~~~~ 83 (162)
T 1top_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-------KEELDAIIEE-VDEDGSGTIDFEEFLVMMV 83 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC-------HHHHHHHHHH-HCTTSCCEEEHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC-------HHHHHHHHHH-HcCCCCCcEeHHHHHHHHH
Confidence 467888999999999999999999999999999998754321 1222333221 1235788999988765543
No 72
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=57.38 E-value=12 Score=37.09 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=46.3
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++++++++.+..+|.+++|.|...++..+++.+..++ ....+..+... .+|+|.|.+.+-.+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~~~~~-----~~g~i~~~eF~~~~ 65 (143)
T 3j04_B 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNP-------TDEYLEGMMSE-----APGPINFTMFLTMF 65 (143)
T ss_dssp CHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCC-------CHHHHHTTTTT-----SSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCC-------CHHHHHHHHHh-----CCCCcCHHHHHHHH
Confidence 467788999999999999999999999999999875422 12222233222 67888887765544
No 73
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=56.34 E-value=20 Score=35.25 Aligned_cols=69 Identities=17% Similarity=0.302 Sum_probs=49.5
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
++++.++++++..+|.+++|.|...++..+++.+..++. ...+..+... +-.+.+|+|.|.+.+-.+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-------~~~~~~l~~~-~d~~~~g~i~~~eF~~~~~~ 70 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVE-------PAAFNEMFNE-ADATGNGKIQFPEFLSMMGR 70 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCC-------HHHHHHHHHH-HCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHHH-hCcCCCCeeeHHHHHHHHHH
Confidence 456788999999999999999999999999998755331 2223333322 22357789999988766543
No 74
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=56.04 E-value=28 Score=34.57 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=47.8
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++.+++++++..||.+++|.|...++...++.+..+. .......+... +-.+.+|.|.|.+.+-.+.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~-------~~~~~~~~~~~-~d~~~~g~i~~~eF~~~~~ 69 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-------KKEEIKKMISE-IDKEGTGKMNFGDFLTVMT 69 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCC-------CHHHHHHHHHH-HTTTCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCCCCCCeeeHHHHHHHHH
Confidence 34677889999999999999999999999999875432 12222333321 1235678999998766543
No 75
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=55.77 E-value=20 Score=34.34 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=49.9
Q ss_pred chHHHHHHhcccC-CCCC-cceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHhh
Q psy12306 1184 HLDEFIRLWSEYD-PDAK-GRIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTS 1260 (1643)
Q Consensus 1184 ~l~~f~~~W~~~D-p~~~-g~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~~ 1260 (1643)
.+.+..++...|| .++. |+|...++..+++. +.+.+|-... ...+..+... +-.+.||.|.|.+.+-.+.+.+
T Consensus 8 ~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~---~~ev~~~i~~-~D~dgDG~Idf~EF~~~~~~~~ 83 (101)
T 3nso_A 8 AVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFR---ECDYNKFMSV-LDTNKDCEVDFVEYVRSLACLC 83 (101)
T ss_dssp HHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTC---HHHHHHHHHH-HHHCCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCC---HHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHHH
Confidence 3567788889997 7886 99999999999985 7666664321 2223333321 2247899999999876665544
No 76
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=55.05 E-value=18 Score=38.15 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=60.1
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCC-cccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHHhhhh
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPP-LGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVRTSLR 1262 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~P-lg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~~~l~ 1262 (1643)
.+...+++..+|.+++|+|...++..++..+..| ...+...+ ...++.+. .++. .+.+|+|.+.+..-.+...+..
T Consensus 108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~D~-~d~dg~Is~~EF~~~~~~~~~~ 185 (204)
T 3e3r_A 108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTE-DEVLRRFLDNFDS-SEKDGQVTLAEFQDYYSGVSAS 185 (204)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCH-HHHHHHHHHHHSC-SSCCSCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCCh-HHHHHHHHHHhhc-cCCCCcCcHHHHHHHHHHcCcc
Confidence 4567788999999999999999999988766443 11222212 22233333 3331 2688999999987776655433
Q ss_pred ccccCCcchhHHHHHHHHHHHHh
Q psy12306 1263 IKTEGNIDDANAELRAVIKKIWK 1285 (1643)
Q Consensus 1263 i~~~g~~~~~~~~l~~~~~~~w~ 1285 (1643)
+. .+++....+++.|+
T Consensus 186 ~~-------~d~~f~~~~~~~w~ 201 (204)
T 3e3r_A 186 MN-------TDEEFVAMMTSAWQ 201 (204)
T ss_dssp CS-------SHHHHHHHHHHHHT
T ss_pred CC-------ChHHHHHHHHHhCC
Confidence 22 23467788889996
No 77
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=54.79 E-value=13 Score=34.23 Aligned_cols=66 Identities=14% Similarity=0.316 Sum_probs=47.2
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++++.++..+++..||.+++|.|...++..+++.+. .. + ..++.+. .++ .+.+|+|.|.+.+-.+
T Consensus 21 l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~---~--~~~~~~~~~~D--~d~dg~I~~~EF~~~~ 87 (91)
T 2pmy_A 21 GDGEELARLRSVFAACDANRSGRLEREEFRALCTELR----VR---P--ADAEAVFQRLD--ADRDGAITFQEFARGF 87 (91)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----CC---H--HHHHHHHHHHC--TTCSSEECHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----cC---H--HHHHHHHHHhC--CCCCCCEeHHHHHHHH
Confidence 4456788899999999999999999999999998874 21 1 2223332 332 4678899888765443
No 78
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=54.28 E-value=31 Score=30.08 Aligned_cols=67 Identities=16% Similarity=0.264 Sum_probs=45.3
Q ss_pred cchHHHHHHhcccCC-CCCc-ceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDP-DAKG-RIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp-~~~g-~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++.+++.+++..||. +++| .|...++..+++. +..++.-.... ..+... +..+.+|+|.|.+.+-.+
T Consensus 4 ~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~------~~~~~~-~D~~~dg~i~~~eF~~~~ 73 (78)
T 1cb1_A 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTL------DDLFQE-LDKNGDGEVSFEEFQVLV 73 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCS------SHHHHH-TCCCSSSSEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHH------HHHHHH-hcCCCCCCCcHHHHHHHH
Confidence 456788899999999 9999 9999999999986 65433211111 122211 234678899998876544
No 79
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=54.00 E-value=16 Score=36.85 Aligned_cols=64 Identities=11% Similarity=0.279 Sum_probs=46.3
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..||.+++|+|...++..++..+..++.- ..++.+... +..+.||+|.|.+.+-.+.
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~-------~e~~~l~~~-~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTD-------EEIDEMIRE-ADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCH-------HHHHHHHHH-HCCSCCSSEEHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccH-------HHHHHHHHH-hCCCCCCeEeHHHHHHHHh
Confidence 456788899999999999999999999988765521 122333321 3357889999998865543
No 80
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=53.79 E-value=24 Score=32.69 Aligned_cols=73 Identities=18% Similarity=0.307 Sum_probs=48.0
Q ss_pred cchHHHHHHhcccCCCCCc---ceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKG---RIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g---~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+.+++..+++..|| ++.| +|...++..+++. ++.++|... ....+..+... +-.+.||+|.|.+.+-.+.+
T Consensus 6 ~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~---~~~~v~~~~~~-~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 6 KAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIK---EQEVVDKVMET-LDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCC---SHHHHHHHHHH-HCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcc---cHHHHHHHHHH-HcCCCCCCCcHHHHHHHHHH
Confidence 34677888889999 5544 9999999999987 333455432 22333444322 23478899999988766654
Q ss_pred hh
Q psy12306 1259 TS 1260 (1643)
Q Consensus 1259 ~~ 1260 (1643)
..
T Consensus 81 l~ 82 (92)
T 3rm1_A 81 IT 82 (92)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 81
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=53.60 E-value=22 Score=31.22 Aligned_cols=62 Identities=18% Similarity=0.389 Sum_probs=42.9
Q ss_pred HHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1187 EFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1187 ~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+..+++..+|++++|.|...++...++.+. ++ + ....+.+... +..+.+|+|.|.+..-.+.
T Consensus 4 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~------~-~~~~~~~~~~-~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-ST------S-ADEVQRMMAE-IDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TC------C-HHHHHHHHHH-HCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CC------C-HHHHHHHHHH-hCCCCCCeEcHHHHHHHHH
Confidence 466788899999999999999999998874 22 1 1222333321 2346789999988765554
No 82
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=52.99 E-value=10 Score=39.84 Aligned_cols=70 Identities=19% Similarity=0.360 Sum_probs=50.3
Q ss_pred ccCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1178 SILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1178 ~~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
+.++++++.++++++..||.+++|.|...++...++.+..++ .......+.. .+..+.+|.+.|.+.+-.
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~-------~~~~~~~~~~-~~d~d~~~~i~~~ef~~~ 72 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSP-------SEAEVNDLMN-EIDVDGNHQIEFSEFLAL 72 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCC-------CHHHHHHHHT-TTCSSCSSSBCTTHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCh-------hHHHHHHHHH-HhCcCCCccchHHHHHHH
Confidence 357889999999999999999999999999999999875422 2222333332 233456777887766543
No 83
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=52.94 E-value=15 Score=32.73 Aligned_cols=67 Identities=10% Similarity=0.261 Sum_probs=45.5
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcC-CCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHHh
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKIS-PPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVRT 1259 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~-~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~~ 1259 (1643)
...++.. ++..||.+++|+|...++...++.+. .++ + ....+.+. .++ .+.+|+|.|.+.+-.+.+.
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~------~-~~~~~~~~~~~D--~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPL------T-DAEVEEAMKEAD--EDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCC------C-HHHHHHHHHHHC--SSGGGSEEHHHHHHHHHCC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCC------C-HHHHHHHHHHhC--CCCCCcCcHHHHHHHHHhh
Confidence 4456778 89999999999999999999888775 322 1 12223333 222 3567899998887665443
No 84
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=52.33 E-value=28 Score=32.33 Aligned_cols=64 Identities=14% Similarity=0.303 Sum_probs=44.9
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
..++..+++..||.+++|+|...++...++.+..++ . ......+. .++ .+.+|+|.|.+.+-.+
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~------~-~~e~~~l~~~~D--~d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKL------T-DEEVDEMIREAD--IDGDGQVNYEEFVQMM 91 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCC------C-HHHHHHHHHHHC--TTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCC------C-HHHHHHHHHHhC--CCCCCcEeHHHHHHHH
Confidence 456778888999999999999999999999875432 1 12223333 322 3678889988775544
No 85
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=52.11 E-value=30 Score=34.71 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=52.1
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++.+++++.+++..+|.+++|.|...++..+++.+..++ ....++.+... +-.+.+|+|.|.+.+-.+.
T Consensus 16 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~l~~~-~d~~~~g~i~~~eF~~~~~ 86 (161)
T 3fwb_A 16 ELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFEL-------PKREILDLIDE-YDSEGRHLMKYDDFYIVMG 86 (161)
T ss_dssp TSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HCTTSSSCEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCcCCCCeEeHHHHHHHHH
Confidence 46778899999999999999999999999999999875432 12233344322 1235678999988766554
No 86
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=52.06 E-value=15 Score=31.92 Aligned_cols=67 Identities=16% Similarity=0.315 Sum_probs=45.3
Q ss_pred chHHHHHHhccc-CCCCC-cceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEY-DPDAK-GRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~-Dp~~~-g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..++..+++..| |++++ |+|...++..+++.+..++..... .++.+. .+ -.+.+|+|.|.+.+-.+.
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~-----~~~~l~~~~--D~~~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMS-----TLDEMIEEV--DKNGDGEVSFEEFLVMMK 72 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSC-----SHHHHHHHH--CTTCSSEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHH-----HHHHHHHHh--CCCCCCcEeHHHHHHHHH
Confidence 346778899999 99999 999999999999988654311111 112222 22 245788999888765543
No 87
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=51.82 E-value=24 Score=33.38 Aligned_cols=69 Identities=13% Similarity=0.264 Sum_probs=48.1
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHhhh
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSL 1261 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~~l 1261 (1643)
++.+++.++...+|++++|+|...++..+++++. . + ...++.+... .-.+.+|+|.|.+.+.++....+
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~----l----~-~~~l~~i~~~-~D~d~dG~i~~~EF~~~~~~~~~ 76 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG----L----P-DLILGKIWDL-ADTDGKGVLSKQEFFVALRLVAC 76 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS----S----C-HHHHHHHHHH-HCCSSSSSCCSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC----C----C-HHHHHHHHHH-HCCCCCCcCCHHHHHHHHHHHHH
Confidence 4456788899999999999999999999998853 2 1 1223343322 12367899999988766654444
No 88
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=51.79 E-value=24 Score=42.60 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=53.1
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++++++++++..||.+++|.|...++..+++.+...+ .....+.|... +-.+.+|.|.|.+.+-.+.
T Consensus 295 ~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~-------TeeEI~~Lf~~-~D~DgDG~IdFeEFl~lms 365 (440)
T 3u0k_A 295 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINE-VDADGDGTIDFPEFLIMMA 365 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HCSSCSSSEEHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCCCCCCcCcHHHHHHHHH
Confidence 46778999999999999999999999999999999875422 22333344321 2346788999998876554
No 89
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=51.26 E-value=20 Score=33.67 Aligned_cols=72 Identities=19% Similarity=0.333 Sum_probs=47.3
Q ss_pred cchHHHHHHhcccC-CCC-CcceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDA-KGRIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~-~g~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+.+.+.+++...|| .++ +|+|...++..+++. +...++-+. ....+..+. ..+ .+.||+|.|.+.+-.+.+
T Consensus 7 ~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~---~~~ev~~~i~~~D--~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 7 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRT---DEAAFQKLMSNLD--SNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---C---CHHHHHHHHHHHC--TTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCC---CHHHHHHHHHHHC--CCCCCCCcHHHHHHHHHH
Confidence 34677888999997 577 589999999999985 654444322 122233433 333 468899999988766654
Q ss_pred h
Q psy12306 1259 T 1259 (1643)
Q Consensus 1259 ~ 1259 (1643)
.
T Consensus 82 ~ 82 (93)
T 4eto_A 82 I 82 (93)
T ss_dssp H
T ss_pred H
Confidence 4
No 90
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=51.16 E-value=29 Score=34.88 Aligned_cols=70 Identities=17% Similarity=0.257 Sum_probs=50.1
Q ss_pred cCCccchHHHHHHhcccCCCC-CcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDA-KGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~-~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++.++.+.+..+|+++ +|.|...++..+++.+..++ ....+..+... +-.+.+|+|.|.+.+-.+
T Consensus 11 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~~~~~-~D~~~~g~i~~~eF~~~~ 81 (161)
T 1dtl_A 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNP-------TPEELQEMIDE-VDEDGSGTVDFDEFLVMM 81 (161)
T ss_dssp GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HCTTSSSSBCHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCCCCCCeEcHHHHHHHH
Confidence 467788999999999999999 99999999999999875422 12223333321 123567888887765544
No 91
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=51.03 E-value=43 Score=33.65 Aligned_cols=68 Identities=16% Similarity=0.444 Sum_probs=48.9
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHh-cCCcccCCCceEhHHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVS-MNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~-~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
..++..+++..||.+++|+|...++..++..+..++ +. ..+..+.. +.+..+.+|+|.|.+.+-.+.+
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~------~~-~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI------TE-DQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp CHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCC------CH-HHHHHHHHHTTCCCCTTCCEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC------CH-HHHHHHHHHhcCCCCCCCcEeHHHHHHHHhc
Confidence 456777889999999999999999999999876543 11 22334433 1344578899999988766653
No 92
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=50.49 E-value=27 Score=35.91 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=49.2
Q ss_pred cCCccchHHHHHHhcccCC--CCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDP--DAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp--~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++++++++...||. +++|.|...++...++.+.. . |.....+.+.. .--+.+|.|.|.+.+-.+
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~----~---~t~~el~~~~~--~d~~~~g~i~f~eFl~~~ 72 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGM----N---PTEAQVHQHGG--TKKMGEKAYKLEEILPIY 72 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTC----C---CCHHHHHTTTC--CSSTTSCEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCC----C---CCHHHHHHHHc--ccccCCCcccHHHHHHHH
Confidence 4788899999999999995 78999999999999998743 2 22222223322 222346789998876544
Q ss_pred H
Q psy12306 1257 V 1257 (1643)
Q Consensus 1257 ~ 1257 (1643)
.
T Consensus 73 ~ 73 (159)
T 3i5g_C 73 E 73 (159)
T ss_dssp H
T ss_pred H
Confidence 3
No 93
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=50.38 E-value=30 Score=35.61 Aligned_cols=70 Identities=20% Similarity=0.369 Sum_probs=49.6
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++++++.++.+.+..+|.+++|.|...++..+++.+..++ ....++.+... +-.+.+|+|.|.+.+-.+.
T Consensus 5 l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~l~~~-~D~~~~g~i~~~EF~~~~~ 74 (179)
T 2f2o_A 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINE-VDADGNGTIDFPEFLTMMA 74 (179)
T ss_dssp -CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hccCCCCCCcHHHHHHHHH
Confidence 5678889999999999999999999999999999875532 12223333321 1235678898888765543
No 94
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=49.98 E-value=38 Score=33.44 Aligned_cols=63 Identities=11% Similarity=0.309 Sum_probs=44.7
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
..++..+.+..||++++|+|...++..++..+..++ + ...+..+... + +.+|+|.|.+.+-.+
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~~-~--d~dg~i~~~eF~~~l 144 (146)
T 2qac_A 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDAL------T-DQEAIDALNA-F--SSEDNIDYKLFCEDI 144 (146)
T ss_dssp CHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCC------C-HHHHHHHHHH-H--CSSSEEEHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCC------C-HHHHHHHHHH-c--CCCCcCcHHHHHHHH
Confidence 356677889999999999999999999999875443 1 1223333322 1 789999998875443
No 95
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=49.93 E-value=29 Score=34.79 Aligned_cols=71 Identities=11% Similarity=0.281 Sum_probs=51.2
Q ss_pred cCCccchHHHHHHhcccC-CCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYD-PDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~D-p~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++++++.++++++..+| .+++|.|...++..+++.+..++ ....+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 6 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~l~~~-~D~~~~g~i~~~eF~~~~~ 77 (158)
T 2jnf_A 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ-------TKSTIRQLIDE-FDPFGNGDIDFDSFKIIGA 77 (158)
T ss_dssp TSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSC-------SHHHHHHHHHH-HCTTCCSEECHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCC-------CHHHHHHHHHH-hCCCCCCcCcHHHHHHHHH
Confidence 467788899999999999 99999999999999999875432 12223333322 1235678899888766554
No 96
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=49.58 E-value=46 Score=33.82 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=48.6
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHhh
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTS 1260 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~~ 1260 (1643)
+++.+++.+++..|| +++|+|...++..++++... +. ..+..|... .-.+.||++.|.+.+.++....
T Consensus 47 ~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl--------~~-~el~~I~~~-~D~d~dG~Ld~~EF~~am~li~ 114 (139)
T 2jq6_A 47 GKDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKL--------PN-TVLGKIWKL-ADVDKDGLLDDEEFALANHLIK 114 (139)
T ss_dssp GGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTC--------CH-HHHHHHHHH-HCSSCCSEEEHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCc--------CH-HHHHHHHHH-hCCCCCCcCcHHHHHHHHHHHH
Confidence 456888999999999 99999999999999988442 11 223343322 2246789999998876654333
No 97
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=49.49 E-value=26 Score=35.75 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=46.1
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
-++..+++..||++++|+|...++..++..+..|+. ...+..+... ...+ ||+|.|.+.+-.+
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls-------~~ei~~~~~~-~D~~-dG~I~y~EF~~~m 146 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFS-------KEEIKNVWKD-APLK-NKQFNYNKMVDIK 146 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCC-------HHHHHHHHTT-CCEE-TTEECHHHHHHHH
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCC-------HHHHHHHHHH-hCCC-cCEEcHHHHHHHh
Confidence 457788999999999999999999999998766541 1223444432 3456 8999999876543
No 98
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=48.98 E-value=31 Score=32.26 Aligned_cols=71 Identities=23% Similarity=0.333 Sum_probs=45.6
Q ss_pred cchHHHHHHhcccC-CCC-CcceehhhHHHHHHhcCCC-cccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDA-KGRIKHLDVVTLLRKISPP-LGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~-~g~i~~~~l~~ll~~l~~P-lg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++++++...|| .++ +|+|...++..+++..-+. +|.... ...+..+... +..+.||+|.|.+.+-.+.
T Consensus 6 ~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~---~~~v~~l~~~-~D~d~dG~I~f~EF~~~~~ 79 (95)
T 1j55_A 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKD---KDAVDKLLKD-LDANGDAQVDFSEFIVFVA 79 (95)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC---------CHHHHHHHH-HCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccC---HHHHHHHHHH-hCCCCCCcCCHHHHHHHHH
Confidence 34677888999999 688 6899999999999864332 443211 1123333322 2356789999998765554
No 99
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=48.97 E-value=30 Score=36.63 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=49.4
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++.++.++.+++..||.+++|.|...++..+++.+..++ ....+..+.... +|.|.|.+.+-.+.
T Consensus 50 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~-------~~~~~~~l~~~~-----~g~i~~~eF~~~~~ 116 (196)
T 3dtp_E 50 MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLC-------TEQELDSMVAEA-----PGPINFTMFLTIFG 116 (196)
T ss_dssp SSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCC-------CHHHHHHHHTTS-----SSCCBHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCC-------CHHHHHHHHHHc-----cCCCcHHHHHHHHH
Confidence 35678899999999999999999999999999999875432 122333444321 78888888765543
No 100
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=48.62 E-value=39 Score=31.71 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=45.3
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
...++..+++..||.+++|+|...++...++.+.+ .|... + ...++.+. .++ .+.+|+|.|.+.+-.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~g~~~--~-~~~~~~~~~~~D--~~~dg~i~~~eF~~~~ 106 (109)
T 5pal_A 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA-HGRDL--N-DTETKALLAAGD--SDHDGKIGADEFAKMV 106 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCT-TCCCC--C-HHHHHHHHHHHC--TTCSSSEEHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH-cCCCC--C-HHHHHHHHHHhC--CCCCCcCcHHHHHHHH
Confidence 34567788899999999999999999999998731 12111 1 12223332 332 4678999988875544
No 101
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=47.96 E-value=36 Score=33.46 Aligned_cols=65 Identities=12% Similarity=0.306 Sum_probs=47.7
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
...++..+++..||++++|+|...++..++..+..++ + ...+..+... ..+.+|+|.|.+.+-.+
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~~~~~--d~~~dg~i~~~eF~~~~ 146 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM------T-EEEVEELMKG--QEDSNGCINYEAFVKHI 146 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCC------C-HHHHHHHHhh--CCCCCCcEeHHHHHHHH
Confidence 3456677889999999999999999999999875433 1 2233455554 45788999998876554
No 102
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=47.80 E-value=48 Score=33.22 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=50.0
Q ss_pred cCCccchHHHHHHhcccC--CCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYD--PDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~D--p~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++.++++++..+| .+++|.|...++..+++.+..++ ....+..+...- . ..+|+|.|.+.+-.+
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~-------~~~~~~~l~~~~-d-~~~g~i~~~eF~~~~ 72 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNP-------TEAQVHQHGGTK-K-MGEKAYKLEEILPIY 72 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCC-------CHHHHHHTTCCS-S-TTSCEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCC-------CHHHHHHHHHHh-c-CCCCeEcHHHHHHHH
Confidence 356788999999999999 99999999999999999875422 222333333221 1 135899999887655
No 103
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=47.48 E-value=34 Score=34.07 Aligned_cols=70 Identities=19% Similarity=0.358 Sum_probs=50.1
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++++++.++++....+|.+++|.|...++...++.+..+. ....+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 4 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~l~~~-~d~~~~g~i~~~eF~~~~~ 73 (148)
T 1exr_A 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINE-VDADGNGTIDFPEFLSLMA 73 (148)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCC-------CHHHHHHHHHH-HCTTCSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-HCCCCCCcCcHHHHHHHHH
Confidence 5667788899999999999999999999999999875432 12223333321 2235778999998765554
No 104
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=47.43 E-value=11 Score=38.67 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=36.1
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCC
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP 1217 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~ 1217 (1643)
.++++++.+++++...||.+++|.|...++...++.+..
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~ 47 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGR 47 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC
Confidence 578899999999999999999999999999999998754
No 105
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=47.30 E-value=15 Score=36.64 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=45.4
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCccc--CCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLN--SDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~--~~~~v~f~~~l~~l~ 1257 (1643)
+++++++++++++..+|.+++|.|...++..+++.+..++ ....+..+... +..+ .+|+|.|.+.+-.+.
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~l~~~-~d~~~~~~g~i~~~eF~~~~~ 75 (151)
T 1w7j_B 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNP-------TNAEVLKVLGN-PKSDELKSRRVDFETFLPMLQ 75 (151)
T ss_dssp -------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCC-------CHHHHHHHTTC-CCHHHHTTCEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCcCcCCCCcCcHHHHHHHHH
Confidence 4667788899999999999999999999999999875432 12233444322 2234 688999988766554
No 106
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=46.98 E-value=30 Score=34.99 Aligned_cols=69 Identities=16% Similarity=0.311 Sum_probs=48.6
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++++.++.+.+..+|.+++|.|...++..+++.+..++. ...+..+... +-.+.+|+|.|.+.+-.+
T Consensus 21 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~-------~~~~~~~~~~-~d~~~~g~i~~~ef~~~~ 89 (166)
T 2aao_A 21 LSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLK-------ESEILDLMQA-ADVDNSGTIDYKEFIAAT 89 (166)
T ss_dssp SCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCC-------HHHHHHHHHH-HCTTCCSSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCC-------HHHHHHHHHH-hCCCCCCeEcHHHHHHHH
Confidence 56678889999999999999999999999999988754321 1222333221 123567888888775544
No 107
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=46.92 E-value=21 Score=35.79 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=50.1
Q ss_pred CCccchHHHHHHhcccCC--CCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDP--DAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp--~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++++++.++.+++..+|. +++|.|...++..+++.+..++ ....+..+ -.+-.+.+|+|.|.+.+-.+.
T Consensus 3 ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~l--~~~D~~~~g~i~~~eF~~~~~ 73 (156)
T 1wdc_C 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP-------RNEDVFAV--GGTHKMGEKSLPFEEFLPAYE 73 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCC-------CHHHHHHT--TCCSSTTSCEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCC-------CHHHHHHH--HhhCCCCCCeeeHHHHHHHHH
Confidence 466788899999999999 9999999999999999875422 12233344 223345678899888765543
No 108
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=46.44 E-value=36 Score=33.83 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=49.0
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++..+|.+++..+|+ ++|+|...++..++.+..- |... ..+|..+ .-.+.||++.|.+...++-
T Consensus 26 ~it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sgL--------p~~~-L~~Iw~l-aD~d~dG~Ld~~EF~~aM~ 93 (121)
T 3fia_A 26 AITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSGL--------PQPV-LAQIWAL-ADMNNDGRMDQVEFSIAMK 93 (121)
T ss_dssp CCCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGCC--------CHHH-HHHHHHH-HCTTCSSEECHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcCC--------CHHH-HHHHHHH-HcCCCCCcCCHHHHHHHHH
Confidence 3688899999999999999 8999999999999887532 2222 2233222 1246789999998766654
No 109
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=46.10 E-value=29 Score=34.07 Aligned_cols=61 Identities=13% Similarity=0.300 Sum_probs=43.4
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+...+++..+|++++|.|...++..++..+..++. . ..+..+ ..++ +.+|+|.+.+.+-.+
T Consensus 84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~-~~~~~~~~~~d---~~dg~i~~~eF~~~l 145 (147)
T 4ds7_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT------D-AEVDEMLREVS---DGSGEINIKQFAALL 145 (147)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC------H-HHHHHHHHHHS---SSCSSEEHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCC------H-HHHHHHHHHhc---CCCCcCcHHHHHHHH
Confidence 45667888999999999999999999998765431 1 122233 3333 788999988875443
No 110
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=45.87 E-value=57 Score=32.50 Aligned_cols=68 Identities=12% Similarity=0.355 Sum_probs=47.9
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhc-CCcccCCCceEhHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSM-NMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~-~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
...++..+++..||.+++|+|...++..++..+..++ + ...+..+... .+..+.+|+|.|.+.+-.+.
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 149 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERL------S-DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCC------C-HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC------C-HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHh
Confidence 3456778899999999999999999999999875543 1 1223333321 13457789999988766554
No 111
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=45.58 E-value=37 Score=33.22 Aligned_cols=60 Identities=13% Similarity=0.260 Sum_probs=43.4
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l 1253 (1643)
..+...+++..+|++++|.|...++..++..+..++ +. ..+..+ ..++ +.+|+|.+.+.+
T Consensus 77 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~~-~~~~~~~~~~d---~~dg~i~~~eF~ 137 (142)
T 2bl0_C 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL------KP-HEFAEFLGITE---TEKGQIRYDNFI 137 (142)
T ss_dssp CHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCC------CH-HHHHHHHHHHC---CSSSEECSHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCC------CH-HHHHHHHHHhC---CCCCcEeHHHHH
Confidence 445677889999999999999999999999876543 11 122333 3444 788999887764
No 112
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=45.33 E-value=36 Score=31.80 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=45.5
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.+++.+++..||++++|.|...++...++.+..++. ...++.+.. .+..+.+|+|.|.+.+-.+
T Consensus 23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-------~~e~~~l~~-~~d~~~~g~i~~~eF~~~~ 86 (105)
T 1wlz_A 23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILT-------DEQFDRLWN-EMPVNAKGRLKYPDFLSRF 86 (105)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCC-------HHHHHHHHT-TSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-------HHHHHHHHH-HcCCCCCCCCcHHHHHHHH
Confidence 456778889999999999999999999998765431 122333332 2345678899988776544
No 113
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=45.23 E-value=34 Score=33.46 Aligned_cols=73 Identities=19% Similarity=0.294 Sum_probs=48.7
Q ss_pred cchHHHHHHhcccC-CCCCc-ceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHh
Q psy12306 1183 HHLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRT 1259 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~ 1259 (1643)
...++++++...|| .+++| +|...++..+++. +...+|.... + ..+..++.. +-.+.||+|.|.+.+-.+.+.
T Consensus 19 ~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t-~--~ev~~li~~-~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 19 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTD-E--AAFQKLMSN-LDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCC-T--THHHHHHHH-HCSSSSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCC-H--HHHHHHHHH-hCCCCCCcEeHHHHHHHHHHH
Confidence 45778889999999 89987 9999999999975 4333543321 1 122333321 235678999999886655443
No 114
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=44.70 E-value=17 Score=36.09 Aligned_cols=71 Identities=21% Similarity=0.301 Sum_probs=50.4
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++++++.++.+.+..+|++++|.|...++..+++.+..++ ....+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-------~~~~~~~l~~~-~d~~~~g~i~~~eF~~~~~ 74 (153)
T 3ox6_A 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMP-------TEMELIELSQQ-INMNLGGHVDFDDFVELMG 74 (153)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HHTTSTTCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCCCCCccCcHHHHHHHHH
Confidence 46778899999999999999999999999999999875432 12223333221 1135678888888765543
No 115
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=44.70 E-value=48 Score=33.10 Aligned_cols=66 Identities=20% Similarity=0.348 Sum_probs=46.7
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..+....++..||++++|+|...++..+++.+..++ + ...+..+... +..+.+|.|.|.+.+-.+.
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~------~-~~~~~~~~~~-~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL------T-DEELRAMIEE-FDLDGDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC------C-HHHHHHHHHT-TCSSSSSSEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCcCcHHHHHHHHh
Confidence 345677889999999999999999999999876543 1 1223333322 2346789999988766553
No 116
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=44.59 E-value=42 Score=30.99 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=45.4
Q ss_pred chHHHHHHhcccC-CCCCc-ceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++..++...|| .+++| +|...++..+++...+ +|... +. .+..+. .+ -.+.+|+|.|.+.+-.+.
T Consensus 8 ~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~-~~~~~--~~--~i~~~~~~~--D~d~dG~I~f~EF~~~~~ 77 (92)
T 2kax_A 8 ALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELC-LGEMK--ES--SIDDLMKSL--DKNSDQEIDFKEYSVFLT 77 (92)
T ss_dssp HHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSC-CTTTC--CT--THHHHHHHH--TTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcC-CCCCC--HH--HHHHHHHHh--CCCCCCcCcHHHHHHHHH
Confidence 4567888889999 99999 9999999999987533 43211 11 122322 32 246789999998765554
No 117
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=44.38 E-value=20 Score=34.05 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=48.8
Q ss_pred cchHHHHHHhcccC-CCCCc-ceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+.+.+..++...|| .+++| +|...++..+++. +...+|-.. ....+..+. ..+ .+.||.|.|.+.+-.+.+
T Consensus 8 ~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~---~~~ev~~~i~~~D--~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 8 QALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKV---DEEGLKKLMGSLD--ENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSC---CHHHHHHHHHHHC--TTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCC---CHHHHHHHHHHhC--CCCCCCCcHHHHHHHHHH
Confidence 34677889999997 78875 9999999999986 433344322 122233333 333 468899999998776655
Q ss_pred hh
Q psy12306 1259 TS 1260 (1643)
Q Consensus 1259 ~~ 1260 (1643)
..
T Consensus 83 ~~ 84 (98)
T 3n22_A 83 IT 84 (98)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 118
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=44.15 E-value=36 Score=36.90 Aligned_cols=71 Identities=10% Similarity=0.113 Sum_probs=50.0
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++++++++..+.+..+|.+++|.|...++...++.+..++ ....++.+... .-.+.+|+|.|.+.+-.+.
T Consensus 44 ~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~-------~~~~~~~l~~~-~D~d~dg~I~~~EF~~~~~ 114 (220)
T 3sjs_A 44 TIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRL-------SPQTALRMMRI-FDTDFNGHISFYEFMAMYK 114 (220)
T ss_dssp GCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCC-------CHHHHHHHHHH-HCTTCSSCBCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC-------CHHHHHHHHHH-hCCCCCCcCCHHHHHHHHH
Confidence 46778899999999999999999999999988877763321 12233344322 1235788999888765443
No 119
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=44.06 E-value=27 Score=34.24 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=44.5
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++++++..+|.+++|.|...++..+++.+..+. ....+..+.. +.+|+|.|.+.+-.+
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~~~~-----~~~g~i~~~eF~~~~ 63 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNP-------TLAEITEIES-----TLPAEVDMEQFLQVL 63 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCC-------CHHHHHHHHT-----TSCSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCC-------CHHHHHHHHh-----CCCCcCcHHHHHHHH
Confidence 44567888999999999999999999999875422 2233444544 778999998876554
No 120
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=43.87 E-value=46 Score=31.16 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=45.4
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
...++..+++..||++++|+|...++..+++.+.. .|.. +....+..+... +-.+.+|+|.|.+.+-.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~~---~~~~~~~~~~~~-~D~~~dg~i~~~eF~~~~ 106 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS-DARD---LSAKETKTLMAA-GDKDGDGKIGVEEFSTLV 106 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCT-TCCC---CCHHHHHHHHHH-HCTTCSSSEEHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhc-cCCC---CCHHHHHHHHHH-HCCCCCCcCCHHHHHHHH
Confidence 34567788899999999999999999999998831 1111 112223333321 223678899988876543
No 121
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=43.64 E-value=34 Score=34.30 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=49.0
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++++++.++++++..+|.+++|.|...++..+++.+..++ ....+..+.. +.+|+|.|.+.+-.+.
T Consensus 11 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~~~~-----~~~g~i~~~eF~~~~~ 77 (156)
T 1wdc_B 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAP-------DDKELTAMLK-----EAPGPLNFTMFLSIFS 77 (156)
T ss_dssp -CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCC-------CHHHHHHHHT-----TSSSCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-------CHHHHHHHHH-----hCCCcCcHHHHHHHHH
Confidence 45677889999999999999999999999999999875432 1223344443 3578888887765543
No 122
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=43.45 E-value=33 Score=32.94 Aligned_cols=73 Identities=19% Similarity=0.337 Sum_probs=49.2
Q ss_pred cchHHHHHHhcccC-CCC-CcceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDA-KGRIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~-~g~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
+.+++..++...|| .++ +|+|...+|..+++. +...++-.. ....+..+. .++ .+.||.|.|.+.+-.+.+
T Consensus 10 ~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~---~~~ev~~~i~~~D--~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 10 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRT---DEAAFQKLMSNLD--SNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSC---CHHHHHHHHHHHC--TTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCC---CHHHHHHHHHHHc--CCCCCCCcHHHHHHHHHH
Confidence 45677888999997 677 489999999999985 654444321 122333433 333 468899999998766654
Q ss_pred hh
Q psy12306 1259 TS 1260 (1643)
Q Consensus 1259 ~~ 1260 (1643)
..
T Consensus 85 ~~ 86 (104)
T 3zwh_A 85 IA 86 (104)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 123
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=42.97 E-value=32 Score=33.74 Aligned_cols=58 Identities=9% Similarity=0.102 Sum_probs=42.9
Q ss_pred HHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1188 FIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1188 f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++++..+|.+++|.|...++..+++.+..++ ....+..+... +.+|+|.|.+.+-.+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~-------~~~~~~~~~~~----~~~g~i~~~eF~~~~ 64 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNP-------TNAELNTIKGQ----LNAKEFDLATFKTVY 64 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCC-------CHHHHHHHHHH----HTSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCC-------CHHHHHHHHHh----cCCCeEcHHHHHHHH
Confidence 77889999999999999999999999875432 22334445443 678888887765444
No 124
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=42.50 E-value=40 Score=31.84 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=48.3
Q ss_pred cchHHHHHHhcccC-CCCCc-ceehhhHHHHHHhcCC-CcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHh
Q psy12306 1183 HHLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRKISP-PLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRT 1259 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~l~~-Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~ 1259 (1643)
++++++.++...|| .+++| +|...++..+++..-+ .+|... ....+..+... +-.+.+|+|.|.+.+-.+.+.
T Consensus 7 ~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~---~~~~v~~l~~~-~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 7 GAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQK---DPMLVEKIMND-LDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSC---CHHHHHHHHHH-HCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccc---cHHHHHHHHHH-HCCCCCCcCcHHHHHHHHHHH
Confidence 34677888899997 88887 9999999999986332 244321 12333444322 235678999999987665543
No 125
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=42.32 E-value=51 Score=32.46 Aligned_cols=65 Identities=15% Similarity=0.387 Sum_probs=46.5
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
..+....++..||++++|.|...++..++..+..++ + ...+..+... +..+.+|+|.|.+.+-.+
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~~-~d~d~dg~i~~~eF~~~~ 145 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKL------T-DAEVDELLKG-VEVDSNGEIDYKKFIEDV 145 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCC------C-HHHHHHHHTT-CCCCTTSEEEHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC------C-HHHHHHHHHH-hCCCCCCeEeHHHHHHHH
Confidence 346677889999999999999999999999875543 1 1223344332 345678999998876554
No 126
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=42.05 E-value=37 Score=32.47 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=21.0
Q ss_pred eehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy12306 1147 FISFYVLCSFLIINLFVAVIMDNFDYLTR 1175 (1643)
Q Consensus 1147 Fisf~ii~~fiilNLfVAvIidnF~~~~~ 1175 (1643)
|..++++....++-++++.+.+.+....+
T Consensus 70 ~~~~~~l~G~~~~~~~~~~i~~~~~~~~~ 98 (103)
T 2k1e_A 70 VAEQVMKAGIEVFALVTAALATDFVRREE 98 (103)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777788889999988875443
No 127
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=41.75 E-value=37 Score=34.36 Aligned_cols=67 Identities=13% Similarity=0.270 Sum_probs=48.5
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCC-CcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP-PLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~-Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++++++.++.+.+..+|.+++|.|...++..+++.+.. ++ ....+..+... .+|+|.|.+.+-.+.
T Consensus 18 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-------~~~~~~~l~~~-----~dg~i~~~eF~~~~~ 85 (166)
T 2mys_B 18 MFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNV-------KNEELDAMIKE-----ASGPINFTVFLTMFG 85 (166)
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCC-------CHHHHHHHHHH-----CCCCcCHHHHHHHHH
Confidence 356678889999999999999999999999999998754 22 12233344332 278888887765543
No 128
>1ufm_A COP9 complex subunit 4; helix-turn-helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.4.5.47
Probab=41.15 E-value=11 Score=35.13 Aligned_cols=50 Identities=20% Similarity=0.224 Sum_probs=41.6
Q ss_pred cchhHHHhccCCccchhHhhhhHHHHHHHHcCCHHHHHHHHHHHHHHHhhc
Q psy12306 1557 SHRVLAEYGLGKFAYPELVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHN 1607 (1643)
Q Consensus 1557 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1607 (1643)
..+-+.+++|-.|.-| |-..+-..||+.++++++|.+.-..+|+.++|-.
T Consensus 12 L~~~v~E~nl~~is~~-Y~~Isl~~La~ll~ls~~~vE~~ls~mI~~~~l~ 61 (84)
T 1ufm_A 12 LDRAVIEHNLLSASKL-YNNITFEELGALLEIPAAKAEKIASQMITEGRMN 61 (84)
T ss_dssp CCHHHHHHHHHHHHHS-CSEEEHHHHHHHTTSCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHh-cCeeeHHHHHHHHCcCHHHHHHHHHHHHhCCcEE
Confidence 3666777888876643 6777889999999999999999999999988754
No 129
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=40.98 E-value=27 Score=35.66 Aligned_cols=37 Identities=14% Similarity=0.271 Sum_probs=31.3
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHH----HHHhcCC
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVT----LLRKISP 1217 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~----ll~~l~~ 1217 (1643)
++++++++++++..+|.+++|.|...++.. +++.+..
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~ 42 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGK 42 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSS
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCC
Confidence 567788999999999999999999999998 5555543
No 130
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=40.95 E-value=42 Score=33.44 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=45.8
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..+...+++..||++++|+|...++..++..+..++ +. ..+..+. .++ + .+|+|.|.+.+-.+.
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~~-~~~~~~~~~~d-~--~dg~I~~~eF~~~~~ 147 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNF------SK-EEIKNVWKDAP-L--KNKQFNYNKMVDIKG 147 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCC------CH-HHHHHHHHHCC-E--ETTEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCC------CH-HHHHHHHHHcC-C--CCCEEeHHHHHHHHh
Confidence 345677889999999999999999999999876543 11 2233343 333 2 789999988766553
No 131
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=40.80 E-value=40 Score=35.48 Aligned_cols=70 Identities=19% Similarity=0.303 Sum_probs=48.8
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++.++.+++..+|.+++|.|...++...++.+..++ + ......+... +-.+.+|+|.|.+.+-.+
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~------~-~~~~~~l~~~-~D~d~dG~I~~~EF~~~~ 72 (188)
T 1s6i_A 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL------M-ESEIKDLMDA-ADIDKSGTIDYGEFIAAT 72 (188)
T ss_dssp SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCC------C-HHHHHHHHHH-TCTTCSSEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCC------C-HHHHHHHHHH-cCCCCCCeEeHHHHHHHH
Confidence 35667788899999999999999999999999998875432 1 1222333322 223567888888775443
No 132
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=40.03 E-value=57 Score=32.90 Aligned_cols=68 Identities=24% Similarity=0.430 Sum_probs=48.8
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++.+++.++...||.+++|+|...++...++.+..++ . ...++.+... +-.+.+|+|.|.+.+-.+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~------~-~~~~~~l~~~-~D~d~dg~I~~~eF~~~~~ 111 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPK------T-HLELKRLIRE-VSSGSEETFSYSDFLRMML 111 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCC------C-HHHHHHHHHH-HCSSCTTEECHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCcEeHHHHHHHHH
Confidence 56788899999999999999999999999999875432 1 1223333321 1246789999998876553
No 133
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=39.86 E-value=29 Score=34.45 Aligned_cols=61 Identities=11% Similarity=0.367 Sum_probs=42.8
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
++..+++..||++++|+|...++..++..+..++ + ...+..+.. .+. +.+|+|.|.+.+-.
T Consensus 87 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~-~~d-~~dg~i~~~eF~~~ 147 (151)
T 1w7j_B 87 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM------T-EEEVETVLA-GHE-DSNGCINYEAFLKH 147 (151)
T ss_dssp -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCC------C-HHHHHHHHT-TCC-CTTSEEEHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCC------C-HHHHHHHHH-hcc-CCCCeEeHHHHHHH
Confidence 3445688899999999999999999999875443 1 122334443 234 78899998877544
No 134
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=39.84 E-value=45 Score=32.62 Aligned_cols=66 Identities=14% Similarity=0.202 Sum_probs=46.2
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..++...++..||++++|+|...++..++..+..++ +. ..+..+... +..+.+|+|.|.+.+-.+.
T Consensus 74 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~------~~-~~~~~~~~~-~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 74 PEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRF------TD-EEVDEMYRE-APIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp CHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCC------CH-HHHHHHHHH-TTCCSSSCCCSTHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCC------CH-HHHHHHHHH-cCCCCCCcCcHHHHHHHHh
Confidence 346678889999999999999999999999876543 11 222333322 2346789998887765543
No 135
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=39.81 E-value=55 Score=34.41 Aligned_cols=67 Identities=16% Similarity=0.168 Sum_probs=50.0
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++++++++++++..+|.+++|.|...++...++.+..++. . .+..+. .+ -.+.+|.|.|.+.+-.+
T Consensus 46 l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~-------~~~~l~~~~--D~d~~g~i~~~EF~~~~ 113 (191)
T 3k21_A 46 SNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-Y-------NFDLLLDQI--DSDGSGKIDYTEFIAAA 113 (191)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-T-------THHHHHHHH--CTTCSSSEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-H-------HHHHHHHHh--CCCCCCeEeHHHHHHHH
Confidence 56788999999999999999999999999999998765443 1 112222 22 23578899998876554
No 136
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=39.04 E-value=29 Score=32.47 Aligned_cols=72 Identities=17% Similarity=0.248 Sum_probs=48.4
Q ss_pred cchHHHHHHhcccC-CCCCc-ceehhhHHHHHHhcCCC-cccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRKISPP-LGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~l~~P-lg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
.+.++++++...|| .+++| +|...++..+++..-++ +|... ....++.+.. .+..+.+|+|.|.+.+-.+.+
T Consensus 9 ~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~---~~~~v~~~~~-~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 9 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIK---DKAVIDEIFQ-GLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCC---CHHHHHHHHT-TSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccc---cHHHHHHHHH-HHcCCCCCcCcHHHHHHHHHH
Confidence 34677889999999 88887 99999999998863222 33321 1233444443 234577899999987665543
No 137
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=39.03 E-value=15 Score=37.20 Aligned_cols=22 Identities=14% Similarity=0.167 Sum_probs=18.7
Q ss_pred CCCChhhhhhhheecccCCCCC
Q psy12306 450 NFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 450 nFd~f~~A~vTlF~iltge~w~ 471 (1643)
-.|++|||++|+.++++||=.+
T Consensus 44 ~~~a~y~~~~T~tTvGyGDi~P 65 (137)
T 4h33_A 44 YPDALWWAIVTATTVGYGDIVP 65 (137)
T ss_dssp HHHHHHHHHHHHTTCCCSSSCC
T ss_pred HHHHHHHHHHHHHcccCCCCCC
Confidence 3589999999999999999443
No 138
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=39.00 E-value=36 Score=33.30 Aligned_cols=65 Identities=22% Similarity=0.390 Sum_probs=45.2
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+...+...+++..+|++++|+|...++..++..+..++ +. ..+..+. .++. .+|+|.|.+.+-.+
T Consensus 72 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~~-~~~~~~~~~~d~---~dg~i~~~eF~~~~ 137 (140)
T 1ggw_A 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKL------SN-EEMDELLKGVPV---KDGMVNYHDFVQMI 137 (140)
T ss_dssp SCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCS------CH-HHHHHHHHHTTC---SSCCSTTTHHHHHH
T ss_pred cccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCC------CH-HHHHHHHHhccC---CCCcEeHHHHHHHH
Confidence 34457788899999999999999999999998875432 11 2233333 3332 68888887765443
No 139
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=38.84 E-value=44 Score=31.34 Aligned_cols=67 Identities=15% Similarity=0.185 Sum_probs=43.5
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~ 1254 (1643)
...++..+++..||.+++|+|...++...++.+.+ .|... + ...++.+... +-.+.+|+|.|.+.+-
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~--~-~~~~~~~~~~-~D~~~dg~i~~~EF~~ 105 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSS-SARVL--T-SAETKAFLAA-GDTDGDGKIGVEEFQS 105 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCT-TSCCC--C-HHHHHHHHHH-HCTTCSSSBCHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhc-ccccC--C-HHHHHHHHHH-hCCCCCCcCcHHHHHH
Confidence 34567888999999999999999999998888731 11111 1 2223333321 1235788888877643
No 140
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=37.94 E-value=45 Score=29.92 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=45.4
Q ss_pred chHHHHHHhcccC-CCCCc-ceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1184 ~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
..+++.+.+..|| .+++| .|...++..+++..-| +|.... ...+..+... +-.+.+|+|.|.+.+-.+.+
T Consensus 8 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~-~g~~~~---~~~~~~~~~~-~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 8 AIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELT-IGSKLQ---DAEIARLMED-LDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSC-CGGGTT---SHHHHHHHHH-HHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcc-cCCCCC---HHHHHHHHHH-hCCCCCCCCcHHHHHHHHHH
Confidence 3567788899999 59999 9999999999985222 443211 1222333221 22467899999887655543
No 141
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=37.84 E-value=54 Score=32.51 Aligned_cols=62 Identities=15% Similarity=0.372 Sum_probs=43.6
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++..+.+..||++++|+|...++..++..+..++ +. ..+..+ ..++ .+.+|+|.|.+.+-.+
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~~-~~~~~~~~~~d--~d~dg~i~~~eF~~~~ 145 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL------TD-DEVDEMIREAD--IDGDGHINYEEFVRMM 145 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCC------CH-HHHHHHHHHHC--SSSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCC------CH-HHHHHHHHHhC--CCCCCcEeHHHHHHHH
Confidence 4456778899999999999999999998876543 11 222333 3333 4678999998876554
No 142
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=37.38 E-value=62 Score=30.27 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=43.5
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~ 1254 (1643)
..++..+++..||.+++|+|...++...++.+. ..|... + ...++.+. .++ .+.+|+|.|.+.+-
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~-~~g~~~--~-~~~~~~~~~~~D--~~~dg~i~~~eF~~ 105 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFS-AGARAL--T-DAETKAFLKAGD--SDGDGAIGVDEWAA 105 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHS-TTCCCC--C-HHHHHHHHHHHC--TTCSSEECHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHc-ccCCCC--C-HHHHHHHHHHhC--CCCCCcEeHHHHHH
Confidence 456788889999999999999999999999883 111111 1 12223333 222 46788898887654
No 143
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=37.35 E-value=52 Score=30.83 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=44.9
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
...++..+++..||++++|+|...++..++..+.. .|.. +....++.+. .++ .+.+|+|.|.+.+-.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~~---~~~~~~~~~~~~~d--~~~dg~i~~~eF~~~ 106 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAA-DGRD---LTDAETKAFLKAAD--KDGDGKIGIDEFETL 106 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT-TCCC---CCHHHHHHHHHHHC--TTCSSSBCHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhh-cCCC---CCHHHHHHHHHHhC--CCCCCeEcHHHHHHH
Confidence 45677889999999999999999999999888731 1211 1122233333 322 357888998876544
No 144
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=36.89 E-value=50 Score=30.88 Aligned_cols=66 Identities=20% Similarity=0.285 Sum_probs=43.6
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~ 1254 (1643)
...++..+++..||++++|+|...++..+++.+.. .|.. . + ....+.+. .++ .+.+|+|.|.+.+-
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~~-~-~-~~~~~~~~~~~D--~~~dg~i~~~eF~~ 104 (108)
T 2pvb_A 38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSP-SARA-L-T-DAETKAFLADGD--KDGDGMIGVDEFAA 104 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT-TSCC-C-C-HHHHHHHHHHHC--TTCSSSBCHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhc-cCCC-C-C-HHHHHHHHHHhC--CCCCCcEeHHHHHH
Confidence 34567888999999999999999999999888731 1111 1 1 12223332 332 35778898887654
No 145
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=36.84 E-value=64 Score=30.09 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=44.0
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~ 1254 (1643)
..+++.+++..||.+++|+|...++..+++.+.+ .|... + ...++.+... +-.+.+|+|.|.+.+-
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~~~--~-~~~~~~~~~~-~D~~~dg~i~~~eF~~ 104 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS-DAREL--T-ESETKSLMDA-ADNDGDGKIGADEFQE 104 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT-TSCCC--C-HHHHHHHHHH-HCCSSSSSEEHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh-ccCCC--C-HHHHHHHHHH-hCCCCCCcCcHHHHHH
Confidence 4567888999999999999999999998888742 12111 1 2223333321 2246788999887654
No 146
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=36.77 E-value=60 Score=32.07 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=47.8
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCC-CcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHHhh
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP-PLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTS 1260 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~-Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~~~ 1260 (1643)
.+++.+++..||.+++|+|...++...+..+.. ++. ...+..+... +-.+.+|+|.|.+.+-.+.+.+
T Consensus 39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~-------~~e~~~~~~~-~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMS-------KEDAQGMVRE-GDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCC-------HHHHHHHHHH-HCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCC-------HHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHhC
Confidence 466788899999999999999999999988752 331 1222333321 2246789999998877776554
No 147
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=36.60 E-value=32 Score=35.72 Aligned_cols=75 Identities=9% Similarity=0.217 Sum_probs=48.2
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCC----CCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGK----LCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~----~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++..+..+.+..+|.+++|.|...++...++.+..-.|... ..+....+..+... +-.+.+|.|.|.+.+-.+
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~d~~g~i~~~ef~~~~ 113 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS-VDFDRNGYIEYSEFVTVC 113 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHH-TCTTCSSSEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH-hCCCCCCcCCHHHHHHHH
Confidence 6678899999999999999999999999998887722111110 00112223333322 234577888888776554
No 148
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=36.33 E-value=92 Score=29.41 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=49.4
Q ss_pred cchHHHHHHhcccCCCC---CcceehhhHHHHHHhcCC-CcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDA---KGRIKHLDVVTLLRKISP-PLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~---~g~i~~~~l~~ll~~l~~-Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
..+++.++++..||.+. +|+|...++..+++...+ +++-. +....+..+... +-.+.||+|.|.+.+-.+.+
T Consensus 8 ~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~---~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 8 KAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDT---GNRKAADKLIQN-LDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSS---HHHHHHHHHHHH-SCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHcccccccc---ccHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHH
Confidence 34677889999999863 799999999999987533 34321 112233344322 23478899999998776655
Q ss_pred hh
Q psy12306 1259 TS 1260 (1643)
Q Consensus 1259 ~~ 1260 (1643)
..
T Consensus 84 ~~ 85 (100)
T 3nxa_A 84 IT 85 (100)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 149
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=36.29 E-value=80 Score=30.72 Aligned_cols=67 Identities=16% Similarity=0.379 Sum_probs=47.4
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
...+....++..+|++++|.|...++..++..+..++ . ...+..+.. .+..+.+|+|.|.+.+-.+.
T Consensus 73 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~------~-~~~~~~~~~-~~d~~~dg~i~~~eF~~~~~ 139 (145)
T 2bl0_B 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL------T-SSEVEELMK-EVSVSGDGAINYESFVDMLV 139 (145)
T ss_dssp GGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCC------C-HHHHHHHHT-TCCCCTTSEEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCC------C-HHHHHHHHH-HcCCCCCCcEeHHHHHHHHH
Confidence 3456677888999999999999999999999875442 1 122334433 23456789999988766554
No 150
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=36.19 E-value=41 Score=34.81 Aligned_cols=75 Identities=12% Similarity=0.150 Sum_probs=48.7
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHH-----HHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVV-----TLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~-----~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~ 1254 (1643)
.++++.+++.+.+..+|.+++|.|...++. .+++.+..+..-.. .....++.+... +-.+.+|+|.|.+.+-
T Consensus 10 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~--~~~~~~~~l~~~-~D~d~~g~i~~~EF~~ 86 (191)
T 1uhk_A 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAK--RHKDAVEAFFGG-AGMKYGVETDWPAYIE 86 (191)
T ss_dssp TCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHH--HHHHHHHHHHHH-TTCCTTCEEEHHHHHH
T ss_pred CCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHH--HHHHHHHHHHHH-hCcCCCCcCcHHHHHH
Confidence 356778899999999999999999999998 67766543221000 000023344322 2346788999988765
Q ss_pred HHH
Q psy12306 1255 AVV 1257 (1643)
Q Consensus 1255 ~l~ 1257 (1643)
.+.
T Consensus 87 ~~~ 89 (191)
T 1uhk_A 87 GWK 89 (191)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 151
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=35.26 E-value=23 Score=40.94 Aligned_cols=45 Identities=24% Similarity=0.253 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCC
Q psy12306 420 FLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQ 469 (1643)
Q Consensus 420 ~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~ 469 (1643)
++.+++||++ +.+.++... .....+-+|.||+|++|+.++.+||=
T Consensus 58 ~~~~l~fa~l-y~~~~~~~~----~~~~~s~~~a~yfs~vT~tTvGYGDi 102 (301)
T 1xl4_A 58 LVTNALFALA-YLACGDVIE----NARPGSFTDAFFFSVQTMATIGYGKL 102 (301)
T ss_dssp HHHHHHHHHH-HHHTCSCST----TSCTTCHHHHHHHHHHHHTTCCCSSS
T ss_pred HHHHHHHHHH-HHhhccccC----CCCcCCHHHHHHHhhhheeccCCCCC
Confidence 3445778888 555543221 11233456889999999999999973
No 152
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=35.11 E-value=66 Score=31.77 Aligned_cols=60 Identities=17% Similarity=0.346 Sum_probs=42.2
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLF 1254 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~ 1254 (1643)
++..+++..||++++|+|...++..++..+..++ +. ..+..+. .+ ..+.+|+|.|.+.+-
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~~-~~~~~~~~~~--D~d~dG~I~~~eF~~ 139 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENL------TD-EELQEMIDEA--DRDGDGEVSEQEFLR 139 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCC------CH-HHHHHHHHHH--CTTSSSSBCHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC------CH-HHHHHHHHHh--CCCCCCcEeHHHHHH
Confidence 4566788899999999999999999998875432 11 2223332 33 346789999887654
No 153
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=35.07 E-value=63 Score=34.98 Aligned_cols=63 Identities=10% Similarity=0.068 Sum_probs=43.7
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
++..+.+..+|.+++|+|...++..++.++..++ +.. .++.+. .++ +.||+|.|.+.+-.+.+
T Consensus 117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~------~~~-~~~~l~~~~d---d~dg~I~~~eF~~~~~~ 180 (220)
T 3sjs_A 117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYI------NQR-TSLLLHRLFA---RGMAFCDLNCWIAICAF 180 (220)
T ss_dssp HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCC------CHH-HHHHHHHHHC-----CCSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCC------CHH-HHHHHHHHhc---CCCCcCcHHHHHHHHHH
Confidence 3456778899999999999999999999876543 111 233433 333 78899999988766543
No 154
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=34.35 E-value=56 Score=33.02 Aligned_cols=63 Identities=14% Similarity=0.263 Sum_probs=44.3
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+...+++..+|++++|.|...++..++..+..++. .. .+..+ ..+ ..+.+|.|.+.+.+-.+.
T Consensus 101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~------~~-~~~~~~~~~--D~~~dg~i~~~eF~~~~~ 164 (169)
T 3qrx_A 101 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT------EE-ELQEMIAEA--DRNDDNEIDEDEFIRIMK 164 (169)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC------HH-HHHHHHHHH--CCSSSSCBCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC------HH-HHHHHHHHh--CCCCCCCEeHHHHHHHHH
Confidence 45667889999999999999999999998765431 11 12233 233 246788999888765553
No 155
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=34.02 E-value=89 Score=31.44 Aligned_cols=65 Identities=22% Similarity=0.314 Sum_probs=46.1
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+...+++..||.+++|+|...++..++..+..++ + ...+..+... +..+.+|+|.|.+.+-.+.
T Consensus 94 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~~~~~-~D~d~dg~I~~~eF~~~~~ 158 (166)
T 2mys_B 94 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRF------T-PEEIKNMWAA-FPPDVAGNVDYKNICYVIT 158 (166)
T ss_pred HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCC------C-HHHHHHHHHh-cCCCCCCeEeHHHHHHHHH
Confidence 45667888999999999999999999998875543 1 1122333322 3456789999988766554
No 156
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=33.59 E-value=62 Score=32.72 Aligned_cols=68 Identities=18% Similarity=0.393 Sum_probs=48.3
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++.+++.+++..||.+++|+|...++...++.+..++ ....++.+... +..+.+|+|.|.+.+-.+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~-------~~~e~~~l~~~-~D~d~dg~I~~~eF~~~~~ 113 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK-------THLEMKKMISE-VTGGVSDTISYRDFVNMML 113 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC-------CHHHHHHHHHH-HHTTSCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC-------CHHHHHHHHHH-HCCCCCCcEeHHHHHHHHH
Confidence 35678889999999999999999999999999875332 12223333321 2246789999998776554
No 157
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=33.47 E-value=33 Score=36.41 Aligned_cols=69 Identities=16% Similarity=0.258 Sum_probs=44.9
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
++++++++..+.+..+|++++|.|...++...++.+..++ + ...+..+... +-.+.+|+|.|.+.+-++
T Consensus 51 l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~------~-~~~~~~l~~~-~D~d~~g~I~~~EF~~~~ 119 (197)
T 3pm8_A 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQK------I-PPDIHQVLRD-IDSNASGQIHYTDFLAAT 119 (197)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC-----------CHHHHHHHHC--------CEEHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCeEcHHHHHHHH
Confidence 4667789999999999999999999999999999874432 1 1223343322 224578899998876554
No 158
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=33.04 E-value=88 Score=31.67 Aligned_cols=62 Identities=13% Similarity=0.295 Sum_probs=43.6
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..+|.+++|.|...++..++..+..++ + ...++.+...- +.+|+|.+.+.+-.+.
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~~~~~~---d~dg~i~~~eF~~~~~ 133 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRL------N-PQTVNSIAKRY---STSGKITFDDYIACCV 133 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCC------C-HHHHHHHHHHT---CBTTBEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC------C-HHHHHHHHHHh---CcCCcCcHHHHHHHHH
Confidence 3556778899999999999999999998765432 1 12233443322 7889999988765553
No 159
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*
Probab=32.66 E-value=26 Score=41.12 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCC
Q psy12306 406 LNSIQSIASLLLLLFLFI-VIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQ 469 (1643)
Q Consensus 406 ~~s~~~l~~l~lll~l~i-~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~ 469 (1643)
..+.+.++.+++++++++ ++||++ +.+.++.+. ...+..-++.||||++|+.++++||=
T Consensus 57 ~~~~~~ll~~~~~~~l~~~l~fall-y~~e~~~~~----~~~~~s~~~a~yfs~vT~tTVGYGDi 116 (333)
T 1p7b_A 57 KVSWPVFFASLAALFVVNNTLFALL-YQLGDAPIA----NQSPPGFVGAFFFSVETLATVGYGDM 116 (333)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHTT-TSSSSSCCC----CSSSSSTHHHHHHHTTTTTTCCCSCC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH-HHHhccccc----CCCCCcHHHhHhhhheeeeecCCCCC
Confidence 335555555444444333 445544 333222111 11233456889999999999999984
No 160
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=32.44 E-value=41 Score=30.59 Aligned_cols=68 Identities=15% Similarity=0.290 Sum_probs=44.9
Q ss_pred cchHHHHHHhcccC-CCCCc-ceehhhHHHHHHh-----cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLRK-----ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~~-----l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
.+.++..+++..|| .+++| .|...++..+++. +..++ + ...+..+... +..+.+|+|.|.+.+-.
T Consensus 6 ~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~------~-~~~~~~~~~~-~D~d~dg~i~~~eF~~~ 77 (93)
T 1k2h_A 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQK------D-ADAVDKIMKE-LDENGDGEVDFQEFVVL 77 (93)
T ss_dssp HHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCC------C-HHHHHHHHHH-HHHCTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCC------C-HHHHHHHHHH-hCCCCCCcCcHHHHHHH
Confidence 34677888999999 79999 9999999999886 43221 1 1223333221 12457888998887655
Q ss_pred HHH
Q psy12306 1256 VVR 1258 (1643)
Q Consensus 1256 l~~ 1258 (1643)
+.+
T Consensus 78 ~~~ 80 (93)
T 1k2h_A 78 VAA 80 (93)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 161
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=32.36 E-value=60 Score=33.57 Aligned_cols=65 Identities=15% Similarity=0.373 Sum_probs=46.7
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++++++.+++..+|.+++|.|...++...++.+..| + ..++.+... +-.+.+|+|.|.+.+-.+
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~-------~--~~~~~~~~~-~D~d~~g~i~~~Ef~~~~ 99 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK-------K--WDINRILQA-LDINDRGNITYTEFMAGC 99 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC-------H--HHHHHHHHH-HCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC-------H--HHHHHHHHH-hCCCCCCcCcHHHHHHHH
Confidence 4567889999999999999999999999999987432 1 223333322 123578889988876443
No 162
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=32.23 E-value=38 Score=35.23 Aligned_cols=76 Identities=14% Similarity=0.199 Sum_probs=48.9
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHH-----HHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVV-----TLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~-----~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l 1253 (1643)
.+++++++++.+++..+|.+++|.|...++. .+++.+..+..-.. .....++.+... +-.+.+|+|.|.+.+
T Consensus 13 ~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~--~~~~~~~~l~~~-~D~d~~g~i~~~EF~ 89 (195)
T 1qv0_A 13 FDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK--RHQVCVEAFFRG-CGMEYGKEIAFPQFL 89 (195)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHH--HHHHHHHHHHHH-TTCCTTCCBCHHHHH
T ss_pred cCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHH--HHHHHHHHHHHH-cCCCCCceEcHHHHH
Confidence 3578889999999999999999999999998 56666543221000 000123333322 234677889988876
Q ss_pred HHHH
Q psy12306 1254 FAVV 1257 (1643)
Q Consensus 1254 ~~l~ 1257 (1643)
-.+.
T Consensus 90 ~~~~ 93 (195)
T 1qv0_A 90 DGWK 93 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 163
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=32.08 E-value=28 Score=32.20 Aligned_cols=70 Identities=16% Similarity=0.275 Sum_probs=44.4
Q ss_pred chHHHHHHhcccC-CCCCc-ceehhhHHHHHH-hcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYD-PDAKG-RIKHLDVVTLLR-KISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1184 ~l~~f~~~W~~~D-p~~~g-~i~~~~l~~ll~-~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
..+++.+.+..|| ++++| +|...++..+++ .+...+|.... ...+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 11 ~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~---~~~~~~l~~~-~D~~~dg~I~~~EF~~~~~ 83 (99)
T 1qls_A 11 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKD---PGVLDRMMKK-LDLDSDGQLDFQEFLNLIG 83 (99)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCC---THHHHHHHHH-HCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCC---HHHHHHHHHH-hCCCCCCcCcHHHHHHHHH
Confidence 4567888899998 99999 999999999887 34211222111 1223333321 2246788999888765443
No 164
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}
Probab=31.98 E-value=24 Score=41.16 Aligned_cols=21 Identities=14% Similarity=-0.021 Sum_probs=18.4
Q ss_pred CCCCChhhhhhhheecccCCC
Q psy12306 449 SNFDSFWQSLLTVFQQEQKGQ 469 (1643)
Q Consensus 449 ~nFd~f~~A~vTlF~iltge~ 469 (1643)
+-.+.||||++|+.++++||=
T Consensus 78 s~~~a~y~s~vT~tTVGYGDi 98 (321)
T 2qks_A 78 GFGGAFFFSVETLATVGYGDM 98 (321)
T ss_dssp THHHHHHHHHHHHTTCCCCSS
T ss_pred chhheeeeeeEEeccccCCCc
Confidence 456789999999999999985
No 165
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=31.75 E-value=16 Score=32.93 Aligned_cols=39 Identities=18% Similarity=0.335 Sum_probs=33.7
Q ss_pred CCCCchhHHhhhcccCCccccCcccccchHhhhhhcCCC
Q psy12306 1430 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPP 1468 (1643)
Q Consensus 1430 lg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~p 1468 (1643)
+.|..+++..+++..||++.+|+|...++..+|+.+..+
T Consensus 17 l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~ 55 (87)
T 1s6j_A 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE 55 (87)
T ss_dssp SCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSS
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC
Confidence 457788889999999999999999999999999876443
No 166
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=31.75 E-value=61 Score=31.27 Aligned_cols=72 Identities=13% Similarity=0.244 Sum_probs=46.8
Q ss_pred chHHHHHHhcccCC-CCCc-ceehhhHHHHHH-hcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDP-DAKG-RIKHLDVVTLLR-KISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp-~~~g-~i~~~~l~~ll~-~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
.++++.++...||. +++| +|...++..+++ .+...+.-.+. ....++.+... +-.+.+|+|.|.+.+-.+.+
T Consensus 10 ~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~--~~~~v~~l~~~-~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 10 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENK--NEKVIEHIMED-LDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGG--CHHHHHHHHHH-HCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhccccc--CHHHHHHHHHH-hCCCCCCCEeHHHHHHHHHH
Confidence 46678888899994 9999 999999999998 66432211101 12233343322 23467899999987665543
No 167
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=31.72 E-value=40 Score=34.61 Aligned_cols=69 Identities=17% Similarity=0.347 Sum_probs=45.5
Q ss_pred chHHHHHHhcccCCCCCcceehhhHHHHHHhc-C--CCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI-S--PPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l-~--~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+++++++++..+| +++|.|...++..+++.+ . |++.. ..+....++.+... +-.+.+|+|.|.+.+-.+
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~--~~~~~~~~~~l~~~-~D~~~~g~i~~~eF~~~~ 73 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKT--DGFGIDTCRSMVAV-MDSDTTGKLGFEEFKYLW 73 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCC--SCCCHHHHHHHHHH-HCTTCSSSBCHHHHHHHH
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhccccccc--CCCCHHHHHHHHHH-HcCCCCCccCHHHHHHHH
Confidence 4678889999999 999999999999999886 3 21111 11223334444332 223577889988875444
No 168
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=31.12 E-value=28 Score=34.27 Aligned_cols=69 Identities=13% Similarity=0.245 Sum_probs=46.3
Q ss_pred CCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCC--cccCCCceEhHHHHHHH
Q psy12306 1180 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNM--PLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~--p~~~~~~v~f~~~l~~l 1256 (1643)
++++++.++.+++..+|.+++|.|...++..+++.+..++ ....+..+...-- -.+. |.|.|.+.+-.+
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-------~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~ 72 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNP-------TNAEINKILGNPSKEEMNA-AAITFEEFLPML 72 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC-------CHHHHHHHHHHhhhccccC-CcCcHHHHHHHH
Confidence 4567788999999999999999999999999998875432 1222333332100 1234 777777765544
No 169
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=30.96 E-value=54 Score=32.24 Aligned_cols=62 Identities=23% Similarity=0.432 Sum_probs=43.3
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHh-cCCCcccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
.+....++..+|++++|.|...++..++.. +..++. . ..+..+ ..+ -.+.+|+|.|.+.+-.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~------~-~~~~~~~~~~--d~~~dg~i~~~eF~~~ 150 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG------H-RDIEEIIRDV--DLNGDGRVDFEEFVRM 150 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCC------H-HHHHHHHHHH--CSSSSSSBCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC------H-HHHHHHHHHh--CCCCCCeEeHHHHHHH
Confidence 566778899999999999999999999988 555431 1 112232 233 2467888988876543
No 170
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=30.91 E-value=1e+02 Score=30.57 Aligned_cols=64 Identities=8% Similarity=0.135 Sum_probs=45.3
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.++...++..||++++|+|...++..++..+..++ +. ..+..+... +..+ +|+|.|.+.+-.+.
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~~-~~~~~~~~~-~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF------NK-DEMRMTFKE-APVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCC------CH-HHHHHHHHH-CCEE-TTEECHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCC------CH-HHHHHHHHh-cCCC-CCEEeHHHHHHHHh
Confidence 45677889999999999999999999999875443 11 223344332 3346 99999988766553
No 171
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=30.46 E-value=1.5e+02 Score=36.24 Aligned_cols=71 Identities=20% Similarity=0.355 Sum_probs=52.9
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
.+++++.+++.+.+..+|.+++|.|...++..+++.+..++ ....++.+... +-.+.+|+|.|.+.+-.+.
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~-------s~eel~~Lf~~-~D~DgdG~IsfeEFl~ll~ 375 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINE-VDADGNGTIDFPEFLTMMA 375 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-------CHHHHHHHHHT-TCTTSSSSEEHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-------CHHHHHHHHHH-hccCCCCcccHHHHHHHHH
Confidence 35567788999999999999999999999999999875532 23345555432 3346789999998765553
No 172
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=30.22 E-value=31 Score=36.72 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=44.3
Q ss_pred cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-------hcCCcccCCCceEhHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-------SMNMPLNSDGTVLFNA 1251 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-------~~~~p~~~~~~v~f~~ 1251 (1643)
.+++++++++++.+..+|.+++|.|...++..+++.+.... . +....+..+. .. +-.+.+|+|.|.+
T Consensus 29 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~---~--~~~~~~~~l~~~~~~lf~~-~D~d~dg~i~~~E 102 (208)
T 2hpk_A 29 DLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLV---N--ATDEQVEKMRDAVRVFFLH-KGVEPVNGLLRED 102 (208)
T ss_dssp -------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHS---C--CCHHHHHHHHHHHHHHHHH-TTCBTTTBEEGGG
T ss_pred HcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhc---C--CCHHHHHHHHHHHHHHHHH-hCCCCCCeEcHHH
Confidence 35667788999999999999999999999999988764311 1 1122223332 21 2346778888887
Q ss_pred HHHHH
Q psy12306 1252 TLFAV 1256 (1643)
Q Consensus 1252 ~l~~l 1256 (1643)
.+-.+
T Consensus 103 F~~~~ 107 (208)
T 2hpk_A 103 WVEAN 107 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 173
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=29.52 E-value=93 Score=31.35 Aligned_cols=62 Identities=15% Similarity=0.302 Sum_probs=43.0
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..+|.+++|.|...++..+++.+..++ + ...+..+...- +.+|+|.+.+.+-.+.
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~~~~~~---d~dg~i~~~eF~~~~~ 131 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRL------S-PQTLTTIVKRY---SKNGRIFFDDYVACCV 131 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCC------C-HHHHHHHHHHH---CBTTBCBHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCC------C-HHHHHHHHHHh---CCCCeEcHHHHHHHHH
Confidence 3556778899999999999999999998875432 1 12223333211 6889999988765553
No 174
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=29.38 E-value=96 Score=32.28 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=41.3
Q ss_pred HHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1187 EFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1187 ~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++++++..|| +++|+|...++...++.+..-.|... + ...++.+. ..+ +.+|+|.|.+.+-.+.
T Consensus 77 ~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~--~-~~~~~~l~~~~d---d~dG~I~~~EF~~~~~ 141 (174)
T 2i7a_A 77 HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFI--S-RELLHLVTLRYS---DSVGRVSFPSLVCFLM 141 (174)
T ss_dssp HHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCC--C-HHHHHHHHHHHS---CTTSEECHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCC--C-HHHHHHHHHHHc---CCCCeEcHHHHHHHHH
Confidence 4556778899 99999999999999988711112211 1 12233333 333 5789999988765443
No 175
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=29.30 E-value=21 Score=32.13 Aligned_cols=37 Identities=27% Similarity=0.544 Sum_probs=33.8
Q ss_pred CCCCchhHHhhhcccCCccccCcccccchHhhhhhcC
Q psy12306 1430 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKIS 1466 (1643)
Q Consensus 1430 lg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~ 1466 (1643)
|.|..++++.++...||++..|+|...++..+|+.+.
T Consensus 8 l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 44 (86)
T 1j7q_A 8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLG 44 (86)
T ss_dssp CSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHc
Confidence 5688899999999999999999999999999999864
No 176
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=29.23 E-value=29 Score=34.70 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=47.4
Q ss_pred ccCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1178 SILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1178 ~~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
..+++.++.++++.+..+|.+++|.|...++..+++.+..+ +....+..+...- +|+|.|.+.+-.
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~-------~~~~~~~~~~~~~-----~g~i~~~eF~~~ 73 (153)
T 2ovk_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRV-------PPDDELNAMLKEC-----PGQLNFTAFLTL 73 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSC-------CCHHHHHHHHHHS-----SSCCCSHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCC-------CCHHHHHHHHHHc-----CCCCCHHHHHHH
Confidence 35778889999999999999999999999999988876432 2223333443321 777777766443
No 177
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=28.97 E-value=40 Score=34.53 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=32.4
Q ss_pred CCccchHHHHHHhccc-CCCCCcceehhhHHHHHHhcC
Q psy12306 1180 LGPHHLDEFIRLWSEY-DPDAKGRIKHLDVVTLLRKIS 1216 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~-Dp~~~g~i~~~~l~~ll~~l~ 1216 (1643)
+++.+.+++.+++..+ |.+++|.|...++..++..+.
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~ 39 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYK 39 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHH
Confidence 3456778899999999 999999999999999888876
No 178
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=28.66 E-value=53 Score=31.38 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=40.7
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
++...++..+|++++|+|...++..++..+.+++ +..+... +-.+.+|+|.+.+..-.
T Consensus 75 ~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~-----------~~~~~~~-~D~~~dg~i~~~ef~~~ 132 (134)
T 1jfj_A 75 IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK-----------VAEQVMK-ADANGDGYITLEEFLEF 132 (134)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH-----------HHHHHHH-HHCSSSSEEEHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH-----------HHHHHHH-hCCCCCCcEeHHHHHHH
Confidence 3467888999999999999999999998776543 1222211 12357889998876543
No 179
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=27.88 E-value=54 Score=34.01 Aligned_cols=75 Identities=16% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCccchHHHHHHhccc-CCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH--------h--cCCcccCCCceE
Q psy12306 1180 LGPHHLDEFIRLWSEY-DPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV--------S--MNMPLNSDGTVL 1248 (1643)
Q Consensus 1180 l~~~~l~~f~~~W~~~-Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~--------~--~~~p~~~~~~v~ 1248 (1643)
+++.+.++..+.+..+ |.+++|.|...++..+++++....|.....+ .++.+. . -.+-.+.+|+|.
T Consensus 6 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~---~~~~l~~~~~~~~~~~~~~~D~d~dG~i~ 82 (191)
T 2ccm_A 6 LSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGK---KHNEARATLKLIWDGLRKYADENEDEQVT 82 (191)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSH---HHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred ccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCH---HHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence 4567788899999999 9999999999999999888722112221111 111221 0 112345778899
Q ss_pred hHHHHHHHH
Q psy12306 1249 FNATLFAVV 1257 (1643)
Q Consensus 1249 f~~~l~~l~ 1257 (1643)
+.+.+-.+.
T Consensus 83 ~~Ef~~~~~ 91 (191)
T 2ccm_A 83 KEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888765544
No 180
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=27.87 E-value=1.3e+02 Score=31.55 Aligned_cols=62 Identities=15% Similarity=0.319 Sum_probs=43.9
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..+|.+++|.|...++..++..+..++ + ...++.+...- +.+|+|.|.+.+-.+.
T Consensus 103 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~-~~~~~~l~~~~---d~dg~i~~~eF~~~~~ 164 (198)
T 1juo_A 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRL------S-PQAVNSIAKRY---STNGKITFDDYIACCV 164 (198)
T ss_dssp HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCC------C-HHHHHHHHHHT---CSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCC------C-HHHHHHHHHHh---CCCCeEcHHHHHHHHH
Confidence 3556778899999999999999999998875432 1 12233443321 7889999988766554
No 181
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=27.49 E-value=38 Score=33.60 Aligned_cols=64 Identities=16% Similarity=0.339 Sum_probs=42.1
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++++.++++.+..+|.+++|.|...++ ..+..+.. . | .+..+... +-.+.+|+|.|.+.+-.+.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~----~---~---~~~~~~~~-~D~~~~g~i~~~ef~~~~~ 65 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQ----N---P---LVQRVIDI-FDTDGNGEVDFKEFIEGVS 65 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTT----C---T---THHHHHHH-HCTTCSSSBCHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhcccc----c---h---HHHHHHHH-HCCCCCCcCcHHHHHHHHH
Confidence 567889999999999999999999888 33333321 1 2 11222221 1245788899888766553
No 182
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=27.31 E-value=26 Score=32.13 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCC
Q psy12306 417 LLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQE 470 (1643)
Q Consensus 417 lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w 470 (1643)
+++++.+++++.+++...++. +-+|.+++|++|+.++.+||=-
T Consensus 7 ~~l~~~~~~~g~~~~~~~e~~-----------~~~~a~yf~~~T~tTvGyGdi~ 49 (82)
T 3ldc_A 7 LLLVLAVIIYGTAGFHFIEGE-----------SWTVSLYWTFVTIATVGYGDYS 49 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHTTCCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHhcccCCCCCC
Confidence 334445555666666555431 3358999999999999999843
No 183
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=27.17 E-value=45 Score=32.86 Aligned_cols=64 Identities=11% Similarity=0.150 Sum_probs=42.7
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCC-cccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNM-PLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~-p~~~~~~v~f~~~l~~l~ 1257 (1643)
+++++++..+|.+++|.|...++..+++.+..++ ....+..+... + -.+.+|+|.|.+.+-.+.
T Consensus 4 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-------~~~~~~~l~~~-~~D~~~~g~i~~~eF~~~~~ 68 (148)
T 1m45_A 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNP-------TNQLVQDIINA-DSSLRDASSLTLDQITGLIE 68 (148)
T ss_dssp CCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCC-------CHHHHHHHHHC---CC--CCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCC-------CHHHHHHHHHH-hhCCCCCCeEcHHHHHHHHH
Confidence 3445678899999999999999999999875432 12233444332 2 345788999988766554
No 184
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A
Probab=27.12 E-value=29 Score=32.86 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCCCCCCCCCCCChhhhhhhheecccCCCCC
Q psy12306 415 LLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEE 471 (1643)
Q Consensus 415 l~lll~l~i~iFAilGmqlFgg~~~~~~~~~~~~~nFd~f~~A~vTlF~iltge~w~ 471 (1643)
+.+++++++++++.+++....+ .+-+|.++++++|+.++.+||=.+
T Consensus 9 ~~~~~~~~~~~~g~~~~~~~e~-----------~~~~~a~yf~~~T~tTvGyGdi~P 54 (97)
T 3ouf_A 9 VLFVLTILTLISGTIFYSTVEG-----------LRPIDALYFSVVTLTTVGYGDFSP 54 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC-----------CCHHHHHHHHHHHHTTCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHccCCCCCCC
Confidence 3444455556667776655432 234589999999999999998543
No 185
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=26.47 E-value=55 Score=32.75 Aligned_cols=72 Identities=14% Similarity=0.209 Sum_probs=42.9
Q ss_pred hHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHH--------HHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1185 LDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVA--------CKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1185 l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~--------~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.+++++.+..+|.+++|.|...++...+.++-..+|.....+.... ++.+... +-.+.+|+|.+.+.+-.+
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~-~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGI-ADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHH-HCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH-hCCCCCCcCcHHHHHHHH
Confidence 5678899999999999999999998876543222233221111110 0111111 223577889988876554
Q ss_pred H
Q psy12306 1257 V 1257 (1643)
Q Consensus 1257 ~ 1257 (1643)
.
T Consensus 82 ~ 82 (166)
T 3akb_A 82 V 82 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 186
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=25.65 E-value=33 Score=31.59 Aligned_cols=66 Identities=20% Similarity=0.314 Sum_probs=44.7
Q ss_pred chHHHHHHhcccCC-CCCc-ceehhhHHHHH-HhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHHH
Q psy12306 1184 HLDEFIRLWSEYDP-DAKG-RIKHLDVVTLL-RKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1184 ~l~~f~~~W~~~Dp-~~~g-~i~~~~l~~ll-~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
..++..++...||. +++| +|...++..++ +.+..++.-.. +..+. .+ ..+.+|+|.|.+.+-.+.+
T Consensus 8 ~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~-------~~~l~~~~--D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 8 ALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKG-------ADVWFKEL--DINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTC-------HHHHHHHH--CTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHH-------HHHHHHHh--CCCCCCCCcHHHHHHHHHH
Confidence 35677888899999 9999 99999999999 66653332111 12222 22 3467899999887655543
No 187
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=25.27 E-value=24 Score=31.50 Aligned_cols=38 Identities=16% Similarity=0.400 Sum_probs=33.6
Q ss_pred cCCCCchhHHhhhcccCCccccCcccccchHhhhhhcC
Q psy12306 1429 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKIS 1466 (1643)
Q Consensus 1429 ilg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~ 1466 (1643)
-|.+.+.+++.+++..||++..|+|...++..+|+.+.
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g 44 (85)
T 2ktg_A 7 VLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALG 44 (85)
T ss_dssp SSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTS
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC
Confidence 35677889999999999999999999999999998764
No 188
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=24.98 E-value=16 Score=32.01 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=31.9
Q ss_pred CCCchhHHhhhcccCCccccCcccccchHhhhhhcCC
Q psy12306 1431 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP 1467 (1643)
Q Consensus 1431 g~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~ 1467 (1643)
.|...++..+++..||++.+|+|...++..+|+.+..
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~ 38 (77)
T 2joj_A 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGF 38 (77)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCC
Confidence 3456788899999999999999999999999998743
No 189
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=24.89 E-value=1.1e+02 Score=31.07 Aligned_cols=63 Identities=13% Similarity=0.265 Sum_probs=44.1
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..||.+++|.|...++..+++.+..++ + ...++.+... .. +.+|+|.|.+.+-.+.
T Consensus 77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~-~~~~~~~~~~-~d-d~dg~i~~~eF~~~~~ 139 (173)
T 1alv_A 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL------N-EHLYSMIIRR-YS-DEGGNMDFDNFISCLV 139 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCC------C-HHHHHHHHHH-HT-CSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCC------C-HHHHHHHHHH-hc-CCCCcCcHHHHHHHHH
Confidence 4566778899999999999999999998875433 1 1223333322 13 7889999988765554
No 190
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=24.88 E-value=66 Score=33.71 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=41.5
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
+..++.++.+.+..+|.+++|.|...++...++.+..++. ...++.+... +-.+.+|+|.|.+.+-.
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-------~~~~~~~~~~-~D~d~dg~i~~~ef~~~ 98 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLD-------QAEAEGVCRK-WDRNGSGTLDLEEFLRA 98 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCC-------HHHHHHHHHH-HCTTCSSSBCHHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCC-------HHHHHHHHHH-hccCCCCcCcHHHHHHH
Confidence 4567788899999999999999999999999998755321 2223333321 12356788888876544
No 191
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=24.73 E-value=1.6e+02 Score=29.85 Aligned_cols=64 Identities=16% Similarity=0.295 Sum_probs=43.8
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+++..||.+++|.|...++..++..+..++ +. ..+..+... +-.+.+|+|.+.+.+-.+.
T Consensus 74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~~-~~~~~~~~~-~d~~~dg~i~~~eF~~~~~ 137 (172)
T 2znd_A 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL------SD-QFHDILIRK-FDRQGRGQIAFDDFIQGCI 137 (172)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC------CH-HHHHHHHHH-HCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCC------CH-HHHHHHHHH-hCCCCCCcCcHHHHHHHHH
Confidence 4566788899999999999999999998875432 11 222333321 2235788999988765553
No 192
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=24.63 E-value=41 Score=35.16 Aligned_cols=40 Identities=25% Similarity=0.463 Sum_probs=36.0
Q ss_pred ccCCCCchhHHhhhcccCCccccCcccccchHhhhhhcCC
Q psy12306 1428 SILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP 1467 (1643)
Q Consensus 1428 silg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~ 1467 (1643)
+-|.+..+.|+++++..||.+..|+|...++...|+.+-.
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~ 42 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL 42 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTC
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCC
Confidence 4577899999999999999999999999999999998743
No 193
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=24.47 E-value=72 Score=31.55 Aligned_cols=72 Identities=22% Similarity=0.374 Sum_probs=48.4
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCC-cccCCCCchHHHHHHH-HhcCCcccCCCceEhHHHHHHHHHhh
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPP-LGFGKLCPHRVACKRL-VSMNMPLNSDGTVLFNATLFAVVRTS 1260 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~P-lg~~~~~~~~~~~~~l-~~~~~p~~~~~~v~f~~~l~~l~~~~ 1260 (1643)
..++...++..+||.+ .|+|...++..++++.-+. +|-... + ..+.++ ..++ .+.||+|.|.+.+-.+.+..
T Consensus 12 ~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~-~--~~v~~~i~~~D--~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 12 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKD-P--LAVDKIMKDLD--QCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSC-T--THHHHHHHHHC--TTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCC-H--HHHHHHHHHHc--CCCCCcCcHHHHHHHHHHHH
Confidence 3467788899999988 8999999999998874332 332221 1 223333 3333 57899999999877666544
No 194
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=24.07 E-value=91 Score=29.61 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=42.1
Q ss_pred HHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1188 FIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1188 f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
+.+++..+|++++|.|...++..+++.+..++ ....++.+... .-.+.+|+|.+.+..-.+
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-------~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~ 62 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIK-------NEQLLQLIFKS-IDADGNGEIDQNEFAKFY 62 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSS-------HHHHHHHHHHH-HCSSCCSEEEHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCC-------CHHHHHHHHHH-HcCCCCCeEcHHHHHHHH
Confidence 45778899999999999999999998875432 12223333322 123678899998876544
No 195
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=23.84 E-value=95 Score=29.72 Aligned_cols=69 Identities=9% Similarity=0.194 Sum_probs=45.6
Q ss_pred cchHHHHHHhcccC-CCCC-cceehhhHHHHHHh-cCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYD-PDAK-GRIKHLDVVTLLRK-ISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVR 1258 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~D-p~~~-g~i~~~~l~~ll~~-l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l~~ 1258 (1643)
.++++++++...|| .+++ |+|...++..+++. +..+.. . +. .+..++.. +-.+.||.|.|.+.+-.+.+
T Consensus 19 ~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~--~--~~--ev~~li~~-~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 19 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK--D--VG--SLDEKMKS-LDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTT--T--CC--CHHHHHHH-HCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCC--C--HH--HHHHHHHH-HCCCCCCCCcHHHHHHHHHH
Confidence 45678889999999 7886 79999999999976 543221 1 11 11222211 23467899999998666543
No 196
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=23.76 E-value=64 Score=32.69 Aligned_cols=71 Identities=7% Similarity=0.137 Sum_probs=46.3
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchH-HH------HHHHH-hcCCcccCCCceEhHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHR-VA------CKRLV-SMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~-~~------~~~l~-~~~~p~~~~~~v~f~~~l 1253 (1643)
+++++++.+++..+|.+++|.|...++...++.+..-+|.... ... +. +..+. .++ .+|+|.|.+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~l~~~~D----~~g~i~~~EF~ 76 (174)
T 1q80_A 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAE-HAKVLMDSLTGVWDNFLTAVA----GGKGIDETTFI 76 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTT-HHHHHHHHHHHHHHHTGGGTT----TTSCEEHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCC-cHHHHHHHHHHHHHHHHHhcC----CCCeEcHHHHH
Confidence 4567788999999999999999999999999887522222211 111 10 11222 222 67889988876
Q ss_pred HHHH
Q psy12306 1254 FAVV 1257 (1643)
Q Consensus 1254 ~~l~ 1257 (1643)
-.+.
T Consensus 77 ~~~~ 80 (174)
T 1q80_A 77 NSMK 80 (174)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 197
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=22.84 E-value=46 Score=27.83 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=24.4
Q ss_pred HHHHHhcccCCCCCcceehhhHHHHHHhc
Q psy12306 1187 EFIRLWSEYDPDAKGRIKHLDVVTLLRKI 1215 (1643)
Q Consensus 1187 ~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l 1215 (1643)
+...++..+|++++|.|.+.++..++.++
T Consensus 37 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 37 LLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp HHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 45678889999999999999998887664
No 198
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=22.75 E-value=25 Score=32.82 Aligned_cols=39 Identities=21% Similarity=0.460 Sum_probs=34.4
Q ss_pred ccccCCCCchhHHhhhcccCCccccCcccccchHhhhhhc
Q psy12306 1426 DWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI 1465 (1643)
Q Consensus 1426 ~~silg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~ 1465 (1643)
+|. +.|.+.+++.++...+|.+..|+|...++..+|+++
T Consensus 1 ~w~-ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~ 39 (95)
T 1c07_A 1 TWV-VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT 39 (95)
T ss_dssp CCS-SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTT
T ss_pred CCc-CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc
Confidence 355 468889999999999999999999999999999875
No 199
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=22.63 E-value=1.2e+02 Score=31.84 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHhcccCCCCCcceehhhHHHHHHhc----C----CCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1187 EFIRLWSEYDPDAKGRIKHLDVVTLLRKI----S----PPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1187 ~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l----~----~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
+...++..+|++++|+|...++..++..+ . +++.-....+ ...+..+. .++ .+.+|+|.+.+..-.+.
T Consensus 108 ~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~-~~~~~~~f~~~D--~d~dG~I~~~Ef~~~~~ 184 (207)
T 2d8n_A 108 KLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTP-EKRAEKIWKYFG--KNDDDKLTEKEFIEGTL 184 (207)
T ss_dssp THHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSH-HHHHHHHHHHTT--CCTTCCEEHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccH-HHHHHHHHHHcC--CCCCCcCcHHHHHHHHH
Confidence 34567889999999999999999998876 3 3332211111 12233333 332 36789999988866654
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=22.59 E-value=52 Score=40.26 Aligned_cols=75 Identities=8% Similarity=0.215 Sum_probs=48.4
Q ss_pred CccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCC-------CchHHHHHHHHhcCCcccCCCceEhHHHH
Q psy12306 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKL-------CPHRVACKRLVSMNMPLNSDGTVLFNATL 1253 (1643)
Q Consensus 1181 ~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~-------~~~~~~~~~l~~~~~p~~~~~~v~f~~~l 1253 (1643)
++++.+++++++..+|.+++|.|...++...+.++...+|.... .......+.+... +-.+.+|+|.|.+.+
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~D~d~dG~I~~~Ef~ 404 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPL-LDMDGSGSIEYSEFI 404 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHH-HCTTCCSSBCHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHH-hcCCCCCcCcHHHHH
Confidence 56788999999999999999999999997777666444444321 1112223333322 123567788877765
Q ss_pred HHH
Q psy12306 1254 FAV 1256 (1643)
Q Consensus 1254 ~~l 1256 (1643)
-++
T Consensus 405 ~~~ 407 (486)
T 3mwu_A 405 ASA 407 (486)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 201
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=22.34 E-value=1.4e+02 Score=31.17 Aligned_cols=68 Identities=16% Similarity=0.266 Sum_probs=46.3
Q ss_pred ccchHHHHHHhcccCCCCCcceehhhHHHHHHhc-CCCcccCCCCchHHHHHHHHhc---CCcccCCCceEhHHHHHHH
Q psy12306 1182 PHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI-SPPLGFGKLCPHRVACKRLVSM---NMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1182 ~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l-~~Plg~~~~~~~~~~~~~l~~~---~~p~~~~~~v~f~~~l~~l 1256 (1643)
....++...++..||.+++|+|...++..++..+ .+++. + ..+..+... .+-.+.+|+|.|.+.+-.+
T Consensus 110 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~-----~--~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~ 181 (202)
T 2bec_A 110 NSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVT-----E--EQLENIADRTVQEADEDGDGAVSFVEFTKSL 181 (202)
T ss_dssp TSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCC-----H--HHHHHHHHHHHHHHCSSCSSSEEHHHHHHTT
T ss_pred ccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCC-----H--HHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 3456778889999999999999999999999988 54431 1 112222211 0224678899988876544
No 202
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=21.76 E-value=21 Score=32.52 Aligned_cols=38 Identities=24% Similarity=0.449 Sum_probs=33.3
Q ss_pred CCCCchhHHhhhcccCCccccCcccccchHhhhhhcCC
Q psy12306 1430 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISP 1467 (1643)
Q Consensus 1430 lg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~ 1467 (1643)
+.|..+++..+++..||++..|+|...++..+|+.+..
T Consensus 14 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~ 51 (90)
T 1avs_A 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQ 51 (90)
T ss_dssp BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC
Confidence 45677888999999999999999999999999998643
No 203
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=21.74 E-value=66 Score=33.82 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=45.6
Q ss_pred cchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1183 HHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1183 ~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.+.+++++ +..+|.+++|.|...++..+++.+....+..+ +....++.+... +-.+.+|+|.|.+.+-.+
T Consensus 30 ~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~--~~~~~~~~l~~~-~D~d~~g~i~~~eF~~~~ 99 (198)
T 1juo_A 30 QTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKP--FNLETCRLMVSM-LDRDMSGTMGFNEFKELW 99 (198)
T ss_dssp CCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCC--CCHHHHHHHHHH-HCTTCSSCEEHHHHHHHH
T ss_pred cccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCC--CCHHHHHHHHHH-hCCCCCCeECHHHHHHHH
Confidence 44555666 77899999999999999999998764211111 223334444332 223567899998876544
No 204
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=21.65 E-value=52 Score=27.91 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=29.4
Q ss_pred chhHHhhhcccCCccccCcccccchHhhhhhcCCC
Q psy12306 1434 HLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPP 1468 (1643)
Q Consensus 1434 hldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~p 1468 (1643)
..++..++...||++..|.|...++..+|+.+..+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~ 38 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQP 38 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCS
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC
Confidence 45678888999999999999999999999886433
No 205
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=21.34 E-value=1.8e+02 Score=29.08 Aligned_cols=61 Identities=16% Similarity=0.243 Sum_probs=41.9
Q ss_pred cccCcHHHHHHHHHHhhcccChHHHHHHHHHhcCCceeeehhhhHHHHHHHHHHHHHHHHHHhhhHHH
Q psy12306 93 TNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKE 160 (1643)
Q Consensus 93 t~FDnf~~A~ltlFqliT~egW~dVmy~~~da~g~~~~~iyFV~~I~iGsFfllNL~LAVI~~~F~~e 160 (1643)
..+.++..|+.-.++.+|+=|+-|+. + .+...-++-+.++++| ..++.++++.+.+.+.+.
T Consensus 36 ~~~~~~~~a~yf~~~T~tTvGyGd~~---P---~t~~~r~~~~~~~~~G-~~~~~~~~~~i~~~~~~~ 96 (139)
T 3eff_K 36 AQLITYPRALWWSVETATTVGYGDLY---P---VTLWGRLVAVVVMVAG-ITSFGLVTAALATWFVGR 96 (139)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCCSSSC---C---CSSHHHHHHHHHHHHH-HHHHHHHHHHHTTTTTHH
T ss_pred cccCCHHHHHHHHheeeecccCCCCc---C---CCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 46778888888888899999998873 1 1222234555555555 566778888888887553
No 206
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=20.80 E-value=25 Score=35.63 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=38.1
Q ss_pred cCcHHHHHHHHHHhhcccChHHHHHHHHHhcCCceeeehhhhHHHHHHHHHHHHHHHHHHhhhHH
Q psy12306 95 FDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSK 159 (1643)
Q Consensus 95 FDnf~~A~ltlFqliT~egW~dVmy~~~da~g~~~~~iyFV~~I~iGsFfllNL~LAVI~~~F~~ 159 (1643)
+.++..|+.=.++.+|+=|+-|+. +. +...-++-+.++++| ..++-+++|.+.+.|.+
T Consensus 41 ~~~~~~a~y~~~~T~tTvGyGDi~---P~---t~~gr~~~~~~~~~g-~~~~~~~~~~i~~~~~~ 98 (137)
T 4h33_A 41 INNYPDALWWAIVTATTVGYGDIV---PV---TPIGRILASIMMLFG-IAFIGMITSTITNFFRC 98 (137)
T ss_dssp CCSHHHHHHHHHHHHTTCCCSSSC---CC---SHHHHHHHHHHHHHH-HHHHHHHHHHHHTTTTT
T ss_pred CCCHHHHHHHHHHHHHcccCCCCC---CC---CHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777777778999998874 11 112234445555555 45678888999888864
No 207
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=20.77 E-value=1.9e+02 Score=26.86 Aligned_cols=68 Identities=12% Similarity=0.079 Sum_probs=40.9
Q ss_pred HHHHhcccCCCCCcceehhhHHHHHHh-cCCCcccCCCCch--------HHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1188 FIRLWSEYDPDAKGRIKHLDVVTLLRK-ISPPLGFGKLCPH--------RVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1188 f~~~W~~~Dp~~~g~i~~~~l~~ll~~-l~~Plg~~~~~~~--------~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
..+....||.++.|+|...++..+++. +..-+|.....+. ...+..+... +-.+.||+|.+.+.+-.+
T Consensus 22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~-~D~d~dG~Is~~EF~~~~ 98 (103)
T 1snl_A 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKN-VDTNQDRLVTLEEFLAST 98 (103)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHH-TCSSCSSEEEHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHH-cCCCCCCcCCHHHHHHHH
Confidence 456778999999999999999998886 2111222111110 0112233221 234678999988875544
No 208
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=20.57 E-value=37 Score=34.04 Aligned_cols=40 Identities=23% Similarity=0.428 Sum_probs=35.6
Q ss_pred cCCCCchhHHhhhcccCCccccCcccccchHhhhhhcCCC
Q psy12306 1429 ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPP 1468 (1643)
Q Consensus 1429 ilg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~~p 1468 (1643)
-+.|.++.++.+++..+|++..|+|...++..+|+.+..+
T Consensus 13 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~ 52 (162)
T 1top_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQN 52 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCC
Confidence 4678889999999999999999999999999999986543
No 209
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=20.52 E-value=1.1e+02 Score=32.28 Aligned_cols=70 Identities=10% Similarity=0.239 Sum_probs=48.2
Q ss_pred cCCccchHHHHHHhcccCCC--CCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHHH
Q psy12306 1179 ILGPHHLDEFIRLWSEYDPD--AKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAV 1256 (1643)
Q Consensus 1179 ~l~~~~l~~f~~~W~~~Dp~--~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~l 1256 (1643)
.++++++++.++.+..+|.+ ++|.|...++...++. +| .. . ...++++... +-.+.+|+|.|.+.+-.+
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~---~~--~-~~~~~~~f~~-~D~d~~g~i~~~Ef~~~~ 100 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NR---NR--R-NLFADRIFDV-FDVKRNGVIEFGEFVRSL 100 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CT---TC--C-CHHHHHHHHH-HCTTCSSEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cc---cc--c-HHHHHHHHHH-hcCCCCCeEeHHHHHHHH
Confidence 45677889999999999999 9999999999998876 21 11 1 1222233221 123578899999886655
Q ss_pred H
Q psy12306 1257 V 1257 (1643)
Q Consensus 1257 ~ 1257 (1643)
.
T Consensus 101 ~ 101 (207)
T 2ehb_A 101 G 101 (207)
T ss_dssp G
T ss_pred H
Confidence 3
No 210
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=20.45 E-value=1.6e+02 Score=30.49 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=43.2
Q ss_pred HHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHH-hcCCcccCCCceEhHHHHHHHH
Q psy12306 1186 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLV-SMNMPLNSDGTVLFNATLFAVV 1257 (1643)
Q Consensus 1186 ~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~-~~~~p~~~~~~v~f~~~l~~l~ 1257 (1643)
++..+.+..+|.+++|.|...++..++..+..++ +. ..+..+. .++ .+.+|+|.+.+.+-.+.
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~------~~-~~~~~~~~~~D--~d~dg~i~~~eF~~~~~ 156 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQV------SE-QTFQALMRKFD--RQRRGSLGFDDYVELSI 156 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCC------CH-HHHHHHHHHHC--TTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCC------CH-HHHHHHHHHhC--CCCCCeEeHHHHHHHHH
Confidence 3456778899999999999999999998765432 11 2222332 332 35788999988766554
No 211
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=20.22 E-value=21 Score=32.00 Aligned_cols=37 Identities=16% Similarity=0.444 Sum_probs=32.3
Q ss_pred CCCCchhHHhhhcccCCccccCcccccchHhhhhhcC
Q psy12306 1430 LGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKIS 1466 (1643)
Q Consensus 1430 lg~hhldef~~~w~~ydp~a~~~i~~~d~~~ll~~~~ 1466 (1643)
+.|...++..+++..||++..|+|...++..+|+.+.
T Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g 41 (86)
T 2opo_A 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG 41 (86)
T ss_dssp -CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT
T ss_pred CCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC
Confidence 4567788999999999999999999999999998763
Done!