RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12307
(106 letters)
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 36.4 bits (84), Expect = 6e-04
Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 8/69 (11%)
Query: 6 DMYLECPPAEDGMERFACPTPD--HMGRYRCIDDHVLCDGFIDCPTGEDEDR------QN 57
Y + ++ P D + I CDG DC DE +
Sbjct: 186 MGYQDFADVVCYTQKADSPMDDFFQCVNGKYISQMKACDGINDCGDQSDELCCKACQGKG 245
Query: 58 FLLENELCW 66
F ++ +C
Sbjct: 246 FHCKSGVCI 254
Score = 27.2 bits (60), Expect = 0.98
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 34 CIDDHVLCDGFIDCPTGEDE 53
CI C+G +DC TGEDE
Sbjct: 253 CIPSQYQCNGEVDCITGEDE 272
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800
and PG950; disulfide bond, alpha helix, calcium CAGE,
signaling protein; NMR {Coturnix japonica} SCOP:
g.12.1.1
Length = 47
Score = 33.2 bits (76), Expect = 0.001
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
CPP + F C P C LCDG DC G DE
Sbjct: 5 CPPGQ-----FRCSEPPG-AHGECYPQDWLCDGHPDCDDGRDE 41
>2fyj_A Low-density lipoprotein receptor-related protein 1; double
module, complement type repeat, calcium, beta-2
hairpin, loop-structures; NMR {Homo sapiens} PDB:
2fyl_B
Length = 82
Score = 33.0 bits (76), Expect = 0.003
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
P + +F C RCI+ + CD DC DE
Sbjct: 41 AYPTCFPLTQFTCNN------GRCININWRCDNDNDCGDNSDE 77
Score = 29.6 bits (67), Expect = 0.056
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
RCI CD DC DE
Sbjct: 16 RCIPISWTCDLDDDCGDRSDES 37
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex,
beta propeller, cholesterol clearance, PCSK
autocatalytic cleavage; 7.01A {Homo sapiens}
Length = 791
Score = 34.4 bits (78), Expect = 0.003
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 3 HSSDMYLECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
S + C F+C + RCI CDG +DC G DE
Sbjct: 52 GSDESQETCLSVTCKSGDFSCGGRVN----RCIPQFWRCDGQVDCDNGSDEQ 99
Score = 34.4 bits (78), Expect = 0.004
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 10 ECPPAEDGMERFACPTPDHMGRYR-----CIDDHVLCDGFIDCPTGEDEDRQN 57
+C D + + +++ CI +C+ DC DE +
Sbjct: 257 DCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKE 309
Score = 31.3 bits (70), Expect = 0.040
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 9 LECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
CPP + F C +CI +CD DC G DE
Sbjct: 99 QGCPPKTCSQDEFRCHD------GKCISRQFVCDSDRDCLDGSDE 137
Score = 31.3 bits (70), Expect = 0.047
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 6/48 (12%)
Query: 10 ECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDRQN 57
CP G F C + CI CD DC G DE Q
Sbjct: 139 SCPVLTCGPASFQCNS------STCIPQLWACDNDPDCEDGSDEWPQR 180
Score = 31.0 bits (69), Expect = 0.060
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
+CI +CDG +C G DE
Sbjct: 35 KCISYKWVCDGSAECQDGSDES 56
Score = 28.6 bits (63), Expect = 0.40
Identities = 8/22 (36%), Positives = 8/22 (36%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
CI CD DC DE
Sbjct: 244 NCIHGSRQCDREYDCKDMSDEV 265
Score = 28.6 bits (63), Expect = 0.40
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 33 RCIDDHVLCDGFIDCPTGEDEDR 55
CI CDG DC DE+
Sbjct: 205 ECIHSSWRCDGGPDCKDKSDEEN 227
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial
hypercholesterolemia, cholestero metabolism, lipid
transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens}
SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1
g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB:
2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Length = 699
Score = 34.0 bits (77), Expect = 0.004
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 3 HSSDMYLECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
S + C F+C + RCI CDG +DC G DE
Sbjct: 34 GSDESQETCLSVTCKSGDFSCGGRVN----RCIPQFWRCDGQVDCDNGSDEQ 81
Score = 34.0 bits (77), Expect = 0.005
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 6/57 (10%)
Query: 10 ECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDRQNFLLENELCW 66
+G +F C + CI +C+ DC DE + L
Sbjct: 250 VNVTLCEGPNKFKCHS------GECITLDKVCNMARDCRDWSDEPIKECGTNECLDN 300
Score = 30.9 bits (69), Expect = 0.053
Identities = 13/55 (23%), Positives = 15/55 (27%), Gaps = 3/55 (5%)
Query: 6 DMYLECPPAEDGMERFACPTPDHMGR---YRCIDDHVLCDGFIDCPTGEDEDRQN 57
D +C D + CI CD DC G DE Q
Sbjct: 108 DSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQR 162
Score = 30.5 bits (68), Expect = 0.071
Identities = 11/52 (21%), Positives = 13/52 (25%), Gaps = 3/52 (5%)
Query: 6 DMYLECPPAEDGMERFACPTPDHMGR---YRCIDDHVLCDGFIDCPTGEDED 54
D +C D + CI CD DC DE
Sbjct: 196 DGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEV 247
Score = 29.8 bits (66), Expect = 0.15
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 6/46 (13%)
Query: 9 LECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
CPP + F C +CI +CD DC G DE
Sbjct: 81 QGCPPKTCSQDEFRCHD------GKCISRQFVCDSDRDCLDGSDEA 120
Score = 29.0 bits (64), Expect = 0.25
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
+CI +CDG +C G DE
Sbjct: 17 KCISYKWVCDGSAECQDGSDES 38
Score = 27.5 bits (60), Expect = 0.98
Identities = 11/48 (22%), Positives = 12/48 (25%)
Query: 10 ECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDRQN 57
G H CI CDG DC DE+
Sbjct: 164 RGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 211
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory
protein, hexagonal bilayer, dihedral D6 symmetry; HET:
HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1
g.12.1.1 h.1.32.1
Length = 217
Score = 34.1 bits (77), Expect = 0.004
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 9/47 (19%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDRQN 57
C E C CI D + CDG DC G DED +
Sbjct: 54 CDEHE-----SECRG----DVPECIHDLLFCDGEKDCRDGSDEDPET 91
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein
complex, RAP, escort protein, calcium- binding; 1.26A
{Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Length = 80
Score = 32.2 bits (74), Expect = 0.005
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
CI CD DC G DE
Sbjct: 53 TCIPQLWACDNDPDCEDGSDEW 74
Score = 30.3 bits (69), Expect = 0.026
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
+CI +CD DC G DE
Sbjct: 14 KCISRQFVCDSDRDCLDGSDEA 35
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand
binding module, ligand binding repeat, compleme repeat,
protein binding; NMR {Homo sapiens}
Length = 50
Score = 31.6 bits (72), Expect = 0.006
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 10/44 (22%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
C P+ F+CP G + C+ + LCDG DC G DE
Sbjct: 7 CGPSS-----FSCP-----GTHVCVPERWLCDGDKDCADGADES 40
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta
hairpin, 3-10 helix, calcium binding, membrane protein;
NMR {Coturnix coturnix} SCOP: g.12.1.1
Length = 47
Score = 31.3 bits (71), Expect = 0.006
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
CPP + F C P C LCDG DC G DE
Sbjct: 7 CPPGQ-----FRCSEPPG-AHGECYPQDWLCDGHPDCDDGRDE 43
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor,
virus-protein complex, icosahedral virus, ATP-binding,
capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB:
1v9u_5*
Length = 39
Score = 30.8 bits (70), Expect = 0.010
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
C E +C +CI CDG DC +GEDE
Sbjct: 1 CRIHE-----ISCGAHST----QCIPVSWRCDGENDCDSGEDE 34
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid
erythrocruorins, respiratory protein, hexagonal
bilayer, dihedral D6 symmetry; HET: HEM; 3.50A
{Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Length = 220
Score = 32.9 bits (74), Expect = 0.010
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 9/47 (19%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDRQN 57
C F C + CI D ++CDG DC DED
Sbjct: 53 CEKRT-----FQCGGNEQ----ECISDLLVCDGHKDCHNAHDEDPDV 90
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling
protein; NMR {Homo sapiens}
Length = 43
Score = 30.4 bits (69), Expect = 0.013
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 10/45 (22%)
Query: 10 ECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
+C F C +C+ + C+G DC DED
Sbjct: 6 KCSLGY-----FPCGNIT-----KCLPQLLHCNGVDDCGNQADED 40
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid
erythrocruorins, respiratory protein, hexagonal
bilayer, dihedral D6 symmetry; HET: HEM; 3.50A
{Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Length = 215
Score = 32.1 bits (72), Expect = 0.016
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Query: 2 GHSSDMYLECPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
G E C D +CI +CDG DC GEDE
Sbjct: 41 GSLRHRVEELEDPSCDEHEHQCGGDDP----QCISKLFVCDGHNDCRNGEDE 88
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding
module, COMP repeat, calcium, cell membrane, coated
PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Length = 80
Score = 30.2 bits (68), Expect = 0.031
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
C P+ F+CP G + C+ + LCDG DC G DE
Sbjct: 9 CGPSS-----FSCP-----GTHVCVPERWLCDGDKDCADGADE 41
>1cr8_A Protein (LOW density lipoprotein receptor related protein);
ligand binding, calcium binding, LDLR, LRP, lipid
binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Length = 42
Score = 29.2 bits (66), Expect = 0.034
Identities = 13/44 (29%), Positives = 13/44 (29%), Gaps = 10/44 (22%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
C E F C CI CDG DC DE
Sbjct: 4 CHTDE-----FQCRLDG-----LCIPLRWRCDGDTDCMDSSDEK 37
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich
repeat, ligand binding domain, calcium CAGE, ligand
binding protein; NMR {Rattus norvegicus}
Length = 48
Score = 29.6 bits (67), Expect = 0.034
Identities = 11/43 (25%), Positives = 13/43 (30%), Gaps = 5/43 (11%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDE 53
+F C CI+ CDG DC DE
Sbjct: 2 AMVLNCTSAQFKCADGS-----SCINSRYRCDGVYDCRDNSDE 39
>3a7q_B Low-density lipoprotein receptor-related protein; signaling
protein; HET: NAG; 2.60A {Homo sapiens}
Length = 44
Score = 29.2 bits (66), Expect = 0.048
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 6/44 (13%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDED 54
P E ++F C RCI CD DC DED
Sbjct: 3 GPAKECEKDQFQCRN------ERCIPSVWRCDEDDDCLDHSDED 40
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium
binding, complement-like repeat, signaling protein; NMR
{Homo sapiens} SCOP: g.12.1.1
Length = 45
Score = 28.8 bits (65), Expect = 0.053
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 33 RCIDDHVLCDGFIDCPTGEDED 54
RCI + CDG DC DE
Sbjct: 17 RCIQERWKCDGDNDCLDNSDEA 38
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor,
cysteine-rich module, calcium; 1.70A {Homo sapiens}
SCOP: g.12.1.1
Length = 37
Score = 28.3 bits (64), Expect = 0.071
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 33 RCIDDHVLCDGFIDCPTGEDE 53
CI CDG DC DE
Sbjct: 13 ECIHSSWRCDGGPDCKDKSDE 33
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand
binding, calcium binding, complement-like repeat, LRP
receptor, signaling protein; 1.85A {Homo sapiens} SCOP:
g.12.1.1
Length = 44
Score = 28.4 bits (64), Expect = 0.079
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 33 RCIDDHVLCDGFIDCPTGEDEDRQN 57
RCI +H CDG DC DE N
Sbjct: 16 RCIPEHWTCDGDNDCGDYSDETHAN 40
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune
system; HET: TPO BMA; 2.51A {Homo sapiens}
Length = 554
Score = 26.5 bits (57), Expect = 1.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 11 CPPAEDGMERFACPTPDHMGRYRCIDDHVLCDGFIDCPTGEDEDR 55
C + F C RC+ H++C+G DC G DED
Sbjct: 60 CVRQAQCGQDFQCKETG-----RCLKRHLVCNGDQDCLDGSDEDD 99
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like
receptor; IG-like domain, domain swapping, collagen
receptor, structural genomics; 1.76A {Mus musculus}
Length = 102
Score = 25.0 bits (55), Expect = 3.6
Identities = 3/10 (30%), Positives = 3/10 (30%)
Query: 25 TPDHMGRYRC 34
G Y C
Sbjct: 71 NETITGHYSC 80
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like
receptor; IG-like domain, cell membrane, glycoprotein;
1.80A {Homo sapiens} PDB: 3rp1_A
Length = 106
Score = 25.1 bits (55), Expect = 4.0
Identities = 4/10 (40%), Positives = 6/10 (60%)
Query: 25 TPDHMGRYRC 34
+ + G YRC
Sbjct: 73 SEGNAGPYRC 82
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like
receptor; IG-like domain, extra celluar domain, domain
swappin nysgrc, structural genomics; 1.90A {Mus
musculus}
Length = 118
Score = 24.7 bits (54), Expect = 4.5
Identities = 3/10 (30%), Positives = 3/10 (30%)
Query: 25 TPDHMGRYRC 34
G Y C
Sbjct: 71 NETITGHYSC 80
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like
folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A
2dyp_D 2otp_A 3q2c_A
Length = 198
Score = 24.4 bits (53), Expect = 7.6
Identities = 4/10 (40%), Positives = 5/10 (50%)
Query: 25 TPDHMGRYRC 34
+P YRC
Sbjct: 165 SPSRRWWYRC 174
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein
O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB:
2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Length = 568
Score = 24.8 bits (54), Expect = 8.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 24 PTPDHMGRYRCID 36
P P ++ RYR D
Sbjct: 443 PHPQYLARYRHAD 455
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold,
natural killer cell receptor, immune SY; HET: NAG; 1.80A
{Homo sapiens} PDB: 1im9_D
Length = 316
Score = 24.5 bits (53), Expect = 8.1
Identities = 4/10 (40%), Positives = 4/10 (40%)
Query: 25 TPDHMGRYRC 34
G YRC
Sbjct: 182 MLALAGTYRC 191
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system;
2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A*
1ow0_C*
Length = 218
Score = 24.4 bits (53), Expect = 8.9
Identities = 4/10 (40%), Positives = 6/10 (60%)
Query: 25 TPDHMGRYRC 34
+ GRY+C
Sbjct: 72 DANKAGRYQC 81
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG,
inhibitory receptor, disulfide, immune system; 1.70A
{Homo sapiens}
Length = 196
Score = 24.4 bits (53), Expect = 9.2
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 25 TPDHMGRYRC 34
T H G YRC
Sbjct: 163 TSVHGGTYRC 172
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor,
immune system, IG domain, cytotoxicity, C2-type IG-like
domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 188
Score = 24.0 bits (52), Expect = 10.0
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 25 TPDHMGRYRC 34
T H G YRC
Sbjct: 157 TTAHRGTYRC 166
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.142 0.476
Gapped
Lambda K H
0.267 0.0674 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,714,181
Number of extensions: 89747
Number of successful extensions: 362
Number of sequences better than 10.0: 1
Number of HSP's gapped: 361
Number of HSP's successfully gapped: 62
Length of query: 106
Length of database: 6,701,793
Length adjustment: 71
Effective length of query: 35
Effective length of database: 4,719,402
Effective search space: 165179070
Effective search space used: 165179070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.5 bits)