RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12308
         (251 letters)



>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
           flavocytochrome cellobiose dehydrogenase (CDH),
           FAD-binding domain {Fungus (Phanerochaete chrysosporium)
           [TaxId: 5306]}
          Length = 360

 Score = 25.0 bits (53), Expect = 9.6
 Identities = 8/33 (24%), Positives = 11/33 (33%)

Query: 202 KVFAPPKTYTKGASPQPHPTSPHPNANFGMTTE 234
           KVF     +   A   PH  + +P        E
Sbjct: 315 KVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAE 347


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.131    0.399 

Gapped
Lambda     K      H
   0.267   0.0682    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 933,742
Number of extensions: 41998
Number of successful extensions: 79
Number of sequences better than 10.0: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 4
Length of query: 251
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 168
Effective length of database: 1,268,006
Effective search space: 213025008
Effective search space used: 213025008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (23.9 bits)