BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12309
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z2K9|IDHC_MICME Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus
GN=IDH1 PE=2 SV=1
Length = 414
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 113/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE KIWYEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|Q9Z2K8|IDHC_MICOH Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster
GN=IDH1 PE=3 SV=1
Length = 414
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 113/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE KIWYEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|O75874|IDHC_HUMAN Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1
PE=1 SV=2
Length = 414
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 113/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE KIWYEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|Q5R9C5|IDHC_PONAB Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1
PE=2 SV=2
Length = 414
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 113/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE KIWYEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEARKIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|P50217|IDHC_SOLTU Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2
SV=1
Length = 416
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 115/126 (91%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + + N+A QKKWPLYLSTKNTILKKYDG FKDIFQEVYE N+KS++E+A IWYEHRLI
Sbjct: 194 FAEASMNMAFQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLI 253
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA ALK GG+VWACKNYDGDVQSD +AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 254 DDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 313
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 314 VTRHYR 319
>sp|Q6XUZ5|IDHC_SHEEP Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1
PE=2 SV=1
Length = 414
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 112/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE IWYEHRLI
Sbjct: 192 FAHSSFQMALSKNWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQNIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|P41562|IDHC_RAT Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus
GN=Idh1 PE=1 SV=1
Length = 414
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 113/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKS+FE KIWYEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSKFEAQKIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|Q9XSG3|IDHC_BOVIN Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1
PE=2 SV=1
Length = 414
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 112/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKS+FE IWYEHRLI
Sbjct: 192 FAHSSFQMALSKNWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSEFEAQNIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1
Length = 415
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + + N+A QKKWPLYLSTKNTILKKYDG FKDIFQEVYE N+KS++E+A IWYEHRLI
Sbjct: 194 FAEASMNMAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLI 253
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDM A ALK GG+VWACKNYDGDVQSD +AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 254 DDMAAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 313
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 314 VTRHYR 319
>sp|O88844|IDHC_MOUSE Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1
PE=1 SV=2
Length = 414
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 112/127 (88%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K WPLYLSTKNTILKKYDG FKDIFQE+Y+K YKSQFE KI YEHRLI
Sbjct: 192 FAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKKYKSQFEAQKICYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K GGF+WACKNYDGDVQSD VAQGYGSLG+MTS+L+CPDGKT+E+EAAHGT
Sbjct: 252 DDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGT 311
Query: 134 VTRHYRF 140
VTRHYR
Sbjct: 312 VTRHYRM 318
>sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus
scrofa GN=IDH2 PE=1 SV=1
Length = 421
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + A+QKKWPLY+STKNTILK YDG FKDIFQE++EK+YK+ F++ KIWYEHRLI
Sbjct: 200 FAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKYKIWYEHRLI 259
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 260 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 319
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 320 VTRHYR 325
>sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2
Length = 413
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 113/126 (89%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + + AL+KKWPLYLSTKNTILKKYDG FKDIFQEVYE ++KS+FE A IWYEHRLI
Sbjct: 195 FAEASMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLI 254
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA ALK GG+VWACKNYDGDVQSD +AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 255 DDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 314
Query: 134 VTRHYR 139
VTRH+R
Sbjct: 315 VTRHFR 320
>sp|P48735|IDHP_HUMAN Isocitrate dehydrogenase [NADP], mitochondrial OS=Homo sapiens
GN=IDH2 PE=1 SV=2
Length = 452
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + A+QKKWPLY+STKNTILK YDG FKDIFQE+++K+YK+ F++ KIWYEHRLI
Sbjct: 231 FAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLI 290
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 291 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 350
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 351 VTRHYR 356
>sp|Q4R502|IDHP_MACFA Isocitrate dehydrogenase [NADP], mitochondrial OS=Macaca
fascicularis GN=IDH2 PE=2 SV=1
Length = 452
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + A+QKKWPLY+STKNTILK YDG FKDIFQE+++K+YK+ F++ KIWYEHRLI
Sbjct: 231 FAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLI 290
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 291 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 350
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 351 VTRHYR 356
>sp|Q04467|IDHP_BOVIN Isocitrate dehydrogenase [NADP], mitochondrial OS=Bos taurus
GN=IDH2 PE=1 SV=2
Length = 452
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + A+QKKWPLY+STKNTILK YDG FKDIFQ ++EK+YK++F++ KIWYEHRLI
Sbjct: 231 FAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQAIFEKHYKTEFDKHKIWYEHRLI 290
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 291 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 350
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 351 VTRHYR 356
>sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus
GN=Idh2 PE=1 SV=3
Length = 452
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + ++QKKWPLYLSTKNTILK YDG FKDIFQE+++K+YK+ F++ KIWYEHRLI
Sbjct: 231 FAHSCFQYSIQKKWPLYLSTKNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLI 290
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 291 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 350
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 351 VTRHYR 356
>sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chloroplastic (Fragment)
OS=Medicago sativa PE=2 SV=1
Length = 433
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 113/126 (89%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + + VAL+KKWPLYLSTKNTILKKYDG FKDIFQEVYE +KS++E A IWYEHRLI
Sbjct: 215 FAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKYEAAGIWYEHRLI 274
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA ALK GG+VWACKNYDGDVQSD +AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 275 DDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 334
Query: 134 VTRHYR 139
VTRH+R
Sbjct: 335 VTRHFR 340
>sp|P56574|IDHP_RAT Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus
GN=Idh2 PE=1 SV=2
Length = 452
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 97/126 (76%), Positives = 114/126 (90%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + ++QKKWPLYLSTKNTI+K YDG FKDIFQE+++K+YK+ F++ KIWYEHRLI
Sbjct: 231 FAHSCFQYSIQKKWPLYLSTKNTIMKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLI 290
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK +GGFVWACKNYDGDVQSDI+AQG+GSLGLMTS+L+CPDGKTIE+EAAHGT
Sbjct: 291 DDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGT 350
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 351 VTRHYR 356
>sp|O14254|IDHP_SCHPO Probable isocitrate dehydrogenase [NADP], mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idp1 PE=3 SV=2
Length = 439
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 108/125 (86%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +ALQKK PLYLSTKNTILKKYDG FKD FQEVYE +YK +FE+ +WY+HRLI
Sbjct: 223 FAHSSFQMALQKKMPLYLSTKNTILKKYDGRFKDTFQEVYESDYKQKFEELGLWYQHRLI 282
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQA+K NGGFVWACKNYDGDV SD+VAQ YGSLGLMTS+L+ P+G+T ESEAAHGT
Sbjct: 283 DDMVAQAIKSNGGFVWACKNYDGDVMSDVVAQAYGSLGLMTSVLIHPNGRTFESEAAHGT 342
Query: 134 VTRHY 138
V RHY
Sbjct: 343 VQRHY 347
>sp|P21954|IDHP_YEAST Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IDP1 PE=1
SV=1
Length = 428
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/126 (76%), Positives = 106/126 (84%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +A+ KK L+LSTKNTILKKYDG FKDIFQEVYE YKS+FEQ I YEHRLI
Sbjct: 209 FAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLI 268
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ +K GGF+ A KNYDGDVQSDIVAQG+GSLGLMTSIL+ PDGKT ESEAAHGT
Sbjct: 269 DDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGT 328
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 329 VTRHYR 334
>sp|O13285|IDH1_CANTR Isocitrate dehydrogenase [NADP], mitochondrial OS=Candida
tropicalis GN=IDP1 PE=3 SV=1
Length = 430
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 106/126 (84%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K PLY+STKNTILKKYDG FKDIFQ++YE++Y ++FE+ +WYEHRLI
Sbjct: 217 FAHASFKMALAKGLPLYMSTKNTILKKYDGRFKDIFQQIYEQDYAAEFEKQGLWYEHRLI 276
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ +K GGFV A KNYDGDVQSDIVAQG+GSLGLMTS LM PDGK E+EAAHGT
Sbjct: 277 DDMVAQMIKSKGGFVMALKNYDGDVQSDIVAQGFGSLGLMTSALMTPDGKAYEAEAAHGT 336
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 337 VTRHYR 342
>sp|P50215|IDH_SPHYA Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd
PE=3 SV=1
Length = 406
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 106/126 (84%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F K ++N L + WP+YLSTKNTILK YDG FKD+FQEV++ + +F+ A I YEHRLI
Sbjct: 190 FAKASFNYGLNRGWPVYLSTKNTILKAYDGRFKDLFQEVFDAEFADKFKAAGIVYEHRLI 249
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA ALK +G FVWACKNYDGDVQSD VAQG+GSLGLMTS+L+ PDGKT+E+EAAHGT
Sbjct: 250 DDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLLSPDGKTVEAEAAHGT 309
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 310 VTRHYR 315
>sp|Q75JR3|IDHC_DICDI Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium
discoideum GN=idhC PE=1 SV=1
Length = 412
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 106/126 (84%), Gaps = 2/126 (1%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F +N +L KKWPLYLSTKNTILK+YDG FKDIFQE+YE+ YK +F+ A IWYEHRLI
Sbjct: 193 FAYACFNFSLDKKWPLYLSTKNTILKRYDGRFKDIFQEIYEREYKVKFDTAGIWYEHRLI 252
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA A+K GGFVWACKNYDGDVQSD VAQGYGSLGLMTS+L+ D ++ +EA+HGT
Sbjct: 253 DDMVAYAMKSEGGFVWACKNYDGDVQSDAVAQGYGSLGLMTSVLLSAD--SLVAEASHGT 310
Query: 134 VTRHYR 139
VTRH+R
Sbjct: 311 VTRHFR 316
>sp|P65097|IDH_MYCTU Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis
GN=icd PE=3 SV=1
Length = 409
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 105/126 (83%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + +++ L KWP+YLSTKNTILK YDG FKD F+ VYE+ +K+QFE A + YEHRLI
Sbjct: 195 FARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLI 254
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA LK GG+VWACKNYDGDVQSD VAQGYGSLGLMTS+LM DGKT+E+EAAHGT
Sbjct: 255 DDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGT 314
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 315 VTRHYR 320
>sp|P65098|IDH_MYCBO Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=icd PE=3 SV=1
Length = 409
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 105/126 (83%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + +++ L KWP+YLSTKNTILK YDG FKD F+ VYE+ +K+QFE A + YEHRLI
Sbjct: 195 FARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLI 254
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVA LK GG+VWACKNYDGDVQSD VAQGYGSLGLMTS+LM DGKT+E+EAAHGT
Sbjct: 255 DDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGT 314
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 315 VTRHYR 320
>sp|P41939|IDHC_YEAST Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IDP2 PE=1
SV=2
Length = 412
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 107/126 (84%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F K ++ +A+++K PLY +TKNTILKKYDG FKD+F+ +Y ++YK +FE IWYEHRLI
Sbjct: 192 FAKASFELAIERKLPLYSTTKNTILKKYDGKFKDVFEAMYARSYKEKFESLGIWYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK GG++ A KNYDGDV+SDIVAQG+GSLGLMTS+L+ PDGKT ESEAAHGT
Sbjct: 252 DDMVAQMLKSKGGYIIAMKNYDGDVESDIVAQGFGSLGLMTSVLITPDGKTFESEAAHGT 311
Query: 134 VTRHYR 139
VTRH+R
Sbjct: 312 VTRHFR 317
>sp|Q75JR2|IDHP_DICDI Isocitrate dehydrogenase [NADP], mitochondrial OS=Dictyostelium
discoideum GN=idhM PE=3 SV=1
Length = 428
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Query: 9 STFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWY 68
S+ F + A+ KK+PLYLSTKNTILKKYDG FKDIFQE+YE+ Y ++F + IWY
Sbjct: 208 SSITAFAHSCFQYAIDKKYPLYLSTKNTILKKYDGQFKDIFQEIYEREYSTKFGELGIWY 267
Query: 69 EHRLIDDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESE 128
EHRLIDDMVA ALK GGFVWACKNYDGDVQSDIVAQGYGSLGLMTS+L DG SE
Sbjct: 268 EHRLIDDMVAFALKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLTNADG-VFASE 326
Query: 129 AAHGTVTRHYR 139
A+HGTVTRH+R
Sbjct: 327 ASHGTVTRHFR 337
>sp|P79089|IDHP_ASPNG Isocitrate dehydrogenase [NADP], mitochondrial OS=Aspergillus niger
GN=icdA PE=2 SV=1
Length = 498
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 101/126 (80%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F ++ +AL K PLY+STKNTILK+YDG FKDIFQE+YE Y+ FE +WYEHRLI
Sbjct: 279 FAHASFQMALLKGLPLYMSTKNTILKRYDGRFKDIFQEIYESTYQKDFEAKNLWYEHRLI 338
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ +K GGFV A KNYDGDVQSDIVAQG+GSLGLMTS L+ P G+ ESEAAHGT
Sbjct: 339 DDMVAQMIKSEGGFVMALKNYDGDVQSDIVAQGFGSLGLMTSTLVTPTGEAFESEAAHGT 398
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 399 VTRHYR 404
>sp|P53982|IDHH_YEAST Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=IDP3 PE=1 SV=1
Length = 420
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 103/126 (81%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F K ++ +AL++K PL+ +TKNTILK YD FK IF +++K YK +F+ KI YEHRLI
Sbjct: 192 FAKASFELALKRKLPLFFTTKNTILKNYDNQFKQIFDNLFDKEYKEKFQALKITYEHRLI 251
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK GGF+ A KNYDGDVQSDIVAQG+GSLGLMTSIL+ PDGKT ESEAAHGT
Sbjct: 252 DDMVAQMLKSKGGFIIAMKNYDGDVQSDIVAQGFGSLGLMTSILITPDGKTFESEAAHGT 311
Query: 134 VTRHYR 139
VTRH+R
Sbjct: 312 VTRHFR 317
>sp|O13294|IDH2_CANTR Isocitrate dehydrogenase [NADP] peroxisomal OS=Candida tropicalis
GN=IDP2 PE=1 SV=3
Length = 411
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 104/126 (82%)
Query: 14 FGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLI 73
F + ++ +A+++K L+ STKNTILKKYDG FKDIF+ +Y YK++ ++ IWYEHRLI
Sbjct: 194 FAESSFQLAIERKLNLFSSTKNTILKKYDGKFKDIFEGLYASKYKTKMDELGIWYEHRLI 253
Query: 74 DDMVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
DDMVAQ LK GG++ A KNYDGDVQSDIVAQG+GSLGLMTS+L+ PDGK ESEAAHGT
Sbjct: 254 DDMVAQMLKSKGGYIIAMKNYDGDVQSDIVAQGFGSLGLMTSVLVTPDGKAFESEAAHGT 313
Query: 134 VTRHYR 139
VTRHYR
Sbjct: 314 VTRHYR 319
>sp|P40495|LYS12_YEAST Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LYS12 PE=1
SV=1
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 29 LYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF- 87
L ++ K+ +L + DG F++I +EVYE N K ++ Q I Y +++D MV + + F
Sbjct: 201 LTVTHKSNVLSQSDGLFREICKEVYESN-KDKYGQ--IKYNEQIVDSMVYRLFREPQCFD 257
Query: 88 VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
V N GD+ SD A GSLG++ S + P+ + E HG+
Sbjct: 258 VIVAPNLYGDILSDGAAALVGSLGVVPSANVGPE--IVIGEPCHGS 301
>sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1
Length = 374
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 34 KNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACK 92
K I++K DG F +EV EK +I YE +ID+ +K F V
Sbjct: 212 KANIMQKTDGLFLKCCREVAEK-------YPEITYEEVVIDNCCMMLVKNPALFDVLVMP 264
Query: 93 NYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
N GD+ SD+ A G LGL S + DG + +EA HG+
Sbjct: 265 NLYGDIISDLCAGLVGGLGLTPSCNIGEDGVAL-AEAVHGS 304
>sp|Q8LG77|IDH6_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial
OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2
Length = 374
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 34 KNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACK 92
K I++K DG F EV K +I+YE +ID+ +K F V
Sbjct: 212 KANIMQKTDGLFLQCCDEVAAK-------YPEIYYEKVVIDNCCMMLVKNPALFDVLVMP 264
Query: 93 NYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
N GD+ SD+ A G LGL S+ + DG + +EA HG+
Sbjct: 265 NLYGDIISDLCAGLVGGLGLTPSMNIGEDGIAL-AEAVHGS 304
>sp|P29696|LEU3_SOLTU 3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 357
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 34 KNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACK 92
K I++K DG F +EV EK +I YE +ID+ +K F V
Sbjct: 205 KANIMQKTDGLFLKCCREVAEK-------YPEIKYEEVVIDNCCMMLVKNPALFDVLVMP 257
Query: 93 NYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
N GD+ SD+ A G LGL S + G + +EA HG+
Sbjct: 258 NLYGDIISDLCAGLIGGLGLTPSCNIGEGGIAL-AEAVHGS 297
>sp|Q55BI2|IDHA_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial
OS=Dictyostelium discoideum GN=idhA PE=3 SV=1
Length = 354
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 34 KNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQ-ALKGNGGFVWACK 92
K I+K+ DG F +EV + Y S I YE ID+ Q L N V
Sbjct: 186 KANIMKQSDGLFVKSCREVSTR-YPS------IKYEELTIDNNCMQLVLDPNQMDVMVLP 238
Query: 93 NYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGT 133
N GD+ SD+ A G LGL S + +G I EA HGT
Sbjct: 239 NLYGDIVSDLCAGLIGGLGLTPSGNIGENGSAI-FEAVHGT 278
>sp|Q47WG3|LEU3_COLP3 3-isopropylmalate dehydrogenase OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=leuB PE=3 SV=1
Length = 362
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 62 EQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCP 120
E + EH +D+ Q ++ F V C N GD+ SDI A GS+GL+ S +
Sbjct: 212 EYPDVELEHLYVDNAAMQLVRDPNQFDVMLCPNLFGDILSDICAMITGSMGLLPSASLNS 271
Query: 121 DG 122
DG
Sbjct: 272 DG 273
>sp|Q9ABN3|LEU3_CAUCR 3-isopropylmalate dehydrogenase OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=leuB PE=3 SV=1
Length = 350
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 46 KDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVA 104
K + E++ + Y + EH L D+ Q ++ F V N GD+ SD A
Sbjct: 198 KQVITELHAREYPD------VQLEHILADNCAMQLVRAPKQFDVIVTDNLFGDILSDAAA 251
Query: 105 QGYGSLGLMTSILMCPDGKTIESEAAHGTV 134
GSLG++ S + GK E HG+
Sbjct: 252 MLTGSLGMLPSAALGAPGKPGLYEPIHGSA 281
>sp|Q9ZDR0|IDH_RICPR Isocitrate dehydrogenase [NADP] OS=Rickettsia prowazekii (strain
Madrid E) GN=icd PE=3 SV=1
Length = 483
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 33 TKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQ-ALKGNGGFVWAC 91
TK+ I+K DG F +F E+ + E +I EH +ID A+ A K +
Sbjct: 174 TKDNIMKFSDGIFHRVFNEIAK-------EYPQINNEHYIIDIGTAKLATKPEIFDIIVT 226
Query: 92 KNYDGDVQSDIVAQGYGSLGLMTS 115
N GD+ SD+ A+ GS+GL S
Sbjct: 227 SNLYGDIISDVAAEISGSVGLAGS 250
>sp|Q4UKR1|IDH_RICFE Isocitrate dehydrogenase [NADP] OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=icd PE=3 SV=2
Length = 483
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 33 TKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQ-ALKGNGGFVWAC 91
+K+ I+K DG F IF E+ + E +I EH +ID A+ A K V
Sbjct: 174 SKDNIMKFSDGVFHKIFNEIAK-------EYPQINNEHYIIDIGTARLATKPEIFDVIVT 226
Query: 92 KNYDGDVQSDIVAQGYGSLGLMTS 115
N GD+ SD+ A+ GS+GL S
Sbjct: 227 SNLYGDIISDVAAEISGSVGLAGS 250
>sp|Q5KWJ4|LEU3_GEOKA 3-isopropylmalate dehydrogenase OS=Geobacillus kaustophilus (strain
HTA426) GN=leuB PE=3 SV=1
Length = 371
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 48 IFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQG 106
+++EV E+ K QF + EH L+D+ Q ++ F V +N GD+ SD +
Sbjct: 201 LWREVAEEVAK-QFPD--VTLEHMLVDNAAMQLIRAPKQFDVIVTENMFGDILSDEASML 257
Query: 107 YGSLGLMTSILMCPDGKTIESEAAHGT 133
GSLG++ S + G ++ E HG+
Sbjct: 258 SGSLGMLPSASLSASGPSL-YEPVHGS 283
>sp|P41019|LEU3_BACMD 3-isopropylmalate dehydrogenase OS=Bacillus megaterium (strain DSM
319) GN=leuB PE=3 SV=2
Length = 369
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 48 IFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQG 106
+++EV E+ K + + EH L+D Q ++ F V +N GD+ SD +
Sbjct: 200 VWREVAEEVAK---DYPDVELEHMLVDSAAMQLIRNPKYFDVVVTENMFGDILSDEASML 256
Query: 107 YGSLGLMTSILMCPDGKTIESEAAHGT 133
GSLG++ S + DG ++ E HG+
Sbjct: 257 TGSLGMLPSASLTADGPSL-YEPVHGS 282
>sp|Q5UPU3|YL268_MIMIV Putative serine/threonine-protein kinase L268 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L268 PE=3 SV=1
Length = 546
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 56 NYKSQFEQAKIWYEHRLIDDMVAQ---------ALKGNGGFVWACKNYDGDVQSDIVAQG 106
NYK+ + +WY R I+ ++ Q ++ GF+ K +DGD +S+I+
Sbjct: 420 NYKTS--KCSLWY--RAIELLLEQNYDEKIDVWSVACICGFILGDKLFDGDNESEIIENI 475
Query: 107 YGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLG 142
+ LG PD ES+ + T+ Y+F+G
Sbjct: 476 FSHLG-------TPDPIIFESKTSINIPTKKYKFVG 504
>sp|Q1RJU4|IDH_RICBR Isocitrate dehydrogenase [NADP] OS=Rickettsia bellii (strain
RML369-C) GN=icd PE=3 SV=1
Length = 483
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 33 TKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQ-ALKGNGGFVWAC 91
+K+ I+K DG F +F E+ + E +I EH +ID A+ A K V
Sbjct: 174 SKDNIMKFSDGIFHKVFNEIAK-------EYPQINNEHYIIDIGTARLATKPEIFDVIVT 226
Query: 92 KNYDGDVQSDIVAQGYGSLGLMTS 115
N GD+ SD+ A+ GS+GL S
Sbjct: 227 SNLYGDIISDVAAEISGSVGLAGS 250
>sp|Q9UXB2|LEU3_SULSO 3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=leuB PE=3
SV=1
Length = 336
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 20 NVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQ 79
N AL ++ + K +++ DG F + +E+ + K+ +E +D A
Sbjct: 156 NYALMRRRKVTCVHKANVMRVTDGLFASVCREIL---------KGKVNFEEMYVDAAAAN 206
Query: 80 ALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTS 115
++ F V N GD+ SD +Q GSLGL S
Sbjct: 207 LVRDPTRFDVIVTSNVYGDILSDEASQIAGSLGLAPS 243
>sp|P87256|LEU3A_ASPNG 3-isopropylmalate dehydrogenase A OS=Aspergillus niger GN=leu2A
PE=2 SV=1
Length = 363
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 17 PTYNVALQKKWPLYL-STKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDD 75
P ++ALQ PL + S + ++ E+ K +F Q KI EH+LID
Sbjct: 170 PRAHLALQHNPPLPVWSLDKANVLATSRLWRKTVTEIMAK----EFPQLKI--EHQLIDS 223
Query: 76 ----MVAQALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMC--PDGK 123
MV + NG + N GD+ SD + GSLGL+ S + PDGK
Sbjct: 224 AAMIMVKNPRQLNG--IIVTSNLFGDIISDEASVIPGSLGLLPSASLSGIPDGK 275
>sp|Q1MA50|LEU3_RHIL3 3-isopropylmalate dehydrogenase OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=leuB PE=3 SV=1
Length = 370
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 48 IFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQG 106
++ +V + +K+++ + + EH L D Q ++ F V N GD+ SD+ A
Sbjct: 202 LWNQVVTETHKAKY--SDVQLEHMLADAGGMQLVRQPKQFDVIVTDNLFGDMLSDVAAML 259
Query: 107 YGSLGLMTSI-LMCPDGKTIESEAAHGTV 134
GSLG++ S L PDGKT + +A + V
Sbjct: 260 TGSLGMLPSASLGAPDGKTGKRKALYEPV 288
>sp|Q8E9N3|LEU3_SHEON 3-isopropylmalate dehydrogenase OS=Shewanella oneidensis (strain
MR-1) GN=leuB PE=1 SV=1
Length = 364
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 66 IWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILM 118
+ EH ID+ Q L+ F V C N GD+ SD +A GS+GL++S M
Sbjct: 217 VELEHIYIDNATMQLLRRPDEFDVMLCSNLFGDILSDEIAMLTGSMGLLSSASM 270
>sp|Q46LE2|LEU3_PROMT 3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain
NATL2A) GN=leuB PE=3 SV=1
Length = 359
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 66 IWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKT 124
I H+ +D+ Q ++ F V N GD+ SDI A GS+G++ S + DG
Sbjct: 216 IELTHQYVDNAAMQLVRNPSQFDVILTGNLFGDILSDIAAMLTGSIGMLPSASLTTDGPG 275
Query: 125 IESEAAHGT 133
+ E HG+
Sbjct: 276 V-FEPVHGS 283
>sp|P48572|LEU3_BUCRP 3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp.
Rhopalosiphum padi GN=leuB PE=3 SV=1
Length = 363
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 46 KDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVA 104
++I +EV KNY + I H ID+ Q +K F V C N GD+ SD A
Sbjct: 206 REIVEEV-SKNYPN------IILSHLYIDNACMQIIKNPSQFDVLLCSNIFGDIISDECA 258
Query: 105 QGYGSLGLMTS 115
GS+G++ S
Sbjct: 259 MITGSIGMLPS 269
>sp|P33197|IDH_THET8 Isocitrate dehydrogenase [NADP] OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=icd PE=1 SV=2
Length = 496
Score = 35.8 bits (81), Expect = 0.096, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 29 LYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKGNGGF- 87
++ +TK+ I+K +G K F++V + E I H ++D+ Q +K F
Sbjct: 186 VHCATKSNIMKLAEGTLKRAFEQVAQ-------EYPDIEAVHIIVDNAAHQLVKRPEQFE 238
Query: 88 VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDIN 147
V N +GD+ SD+ + G LG S + + EA HG+ ++ G N IN
Sbjct: 239 VIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEVAIF--EAVHGSAP---KYAGKNVIN 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,873,365
Number of Sequences: 539616
Number of extensions: 2344104
Number of successful extensions: 5653
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 5608
Number of HSP's gapped (non-prelim): 197
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)