Query psy12309
Match_columns 152
No_of_seqs 119 out of 1071
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 15:45:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w0d_A 3-isopropylmalate dehyd 100.0 1.4E-61 4.9E-66 413.4 10.6 142 3-151 148-291 (337)
2 1x0l_A Homoisocitrate dehydrog 100.0 6.3E-61 2.1E-65 408.9 10.8 140 3-151 138-279 (333)
3 1lwd_A Isocitrate dehydrogenas 100.0 5.3E-61 1.8E-65 419.0 9.9 149 3-151 181-335 (413)
4 1cnz_A IPMDH, IMDH, protein (3 100.0 7.5E-61 2.6E-65 412.3 10.4 140 3-151 164-304 (363)
5 3udu_A 3-isopropylmalate dehyd 100.0 7.1E-61 2.4E-65 412.1 10.2 139 4-151 162-301 (361)
6 3flk_A Tartrate dehydrogenase/ 100.0 1.2E-60 4.1E-65 411.2 11.2 141 4-151 161-304 (364)
7 2uxq_A Isocitrate dehydrogenas 100.0 4.9E-61 1.7E-65 418.0 8.7 148 3-151 178-331 (402)
8 1a05_A IPMDH, IMDH, 3-isopropy 100.0 1.3E-60 4.6E-65 410.1 10.2 139 3-151 159-298 (358)
9 2y3z_A 3-isopropylmalate dehyd 100.0 1.7E-60 5.7E-65 409.6 10.5 140 2-151 156-296 (359)
10 3dms_A Isocitrate dehydrogenas 100.0 3E-60 1E-64 415.6 12.3 146 4-151 209-369 (427)
11 3vmk_A 3-isopropylmalate dehyd 100.0 1.6E-60 5.3E-65 411.7 10.2 139 4-151 174-313 (375)
12 3us8_A Isocitrate dehydrogenas 100.0 1.6E-60 5.4E-65 417.4 9.9 149 3-151 202-356 (427)
13 3u1h_A 3-isopropylmalate dehyd 100.0 1.8E-60 6.2E-65 412.7 10.1 139 4-151 181-320 (390)
14 2qfy_A Isocitrate dehydrogenas 100.0 1.3E-60 4.5E-65 417.9 8.7 148 4-151 198-351 (427)
15 3ty4_A Probable homoisocitrate 100.0 2E-60 6.8E-65 409.9 9.6 140 4-151 157-312 (366)
16 1vlc_A 3-isopropylmalate dehyd 100.0 3.6E-60 1.2E-64 408.3 10.4 138 3-151 168-306 (366)
17 3blx_A Isocitrate dehydrogenas 100.0 5.1E-60 1.8E-64 405.3 10.5 141 3-151 151-294 (349)
18 3r8w_A 3-isopropylmalate dehyd 100.0 4.4E-60 1.5E-64 412.0 9.8 139 4-151 202-341 (405)
19 2e0c_A 409AA long hypothetical 100.0 2.8E-59 9.5E-64 407.7 11.3 146 4-151 192-350 (409)
20 3blx_B Isocitrate dehydrogenas 100.0 2.1E-59 7.1E-64 402.2 10.0 140 3-151 157-301 (354)
21 4aoy_A Isocitrate dehydrogenas 100.0 2E-59 6.8E-64 407.9 9.8 149 2-151 178-332 (402)
22 2iv0_A Isocitrate dehydrogenas 100.0 3.5E-59 1.2E-63 407.4 10.5 146 4-151 192-353 (412)
23 1tyo_A Isocitrate dehydrogenas 100.0 4.2E-59 1.4E-63 409.1 10.7 146 4-151 202-363 (435)
24 2d4v_A Isocitrate dehydrogenas 100.0 8.9E-59 3.1E-63 406.4 11.6 145 5-151 200-372 (429)
25 1hqs_A Isocitrate dehydrogenas 100.0 9.2E-59 3.1E-63 405.8 10.7 148 4-151 190-365 (423)
26 1wpw_A 3-isopropylmalate dehyd 100.0 9.7E-59 3.3E-63 395.8 10.2 137 4-151 139-276 (336)
27 1zor_A Isocitrate dehydrogenas 100.0 1.2E-58 4E-63 402.7 9.3 144 3-151 177-329 (399)
28 2d1c_A Isocitrate dehydrogenas 100.0 1.7E-58 5.9E-63 409.5 10.4 139 4-151 160-300 (496)
29 4aty_A Terephthalate 1,2-CIS-d 90.6 0.064 2.2E-06 45.3 0.8 24 125-148 308-331 (349)
30 3lxy_A 4-hydroxythreonine-4-ph 88.9 0.11 3.6E-06 44.1 0.8 125 5-148 179-318 (334)
31 1yxo_A 4-hydroxythreonine-4-ph 88.9 0.1 3.6E-06 44.1 0.8 132 6-148 175-313 (328)
32 2hi1_A 4-hydroxythreonine-4-ph 88.5 0.11 3.6E-06 44.1 0.6 133 5-148 181-319 (330)
33 3tsn_A 4-hydroxythreonine-4-ph 84.2 0.26 9E-06 42.3 0.8 24 125-148 329-353 (367)
34 2b0t_A NADP isocitrate dehydro 76.6 13 0.00046 34.0 9.1 121 7-140 458-588 (738)
35 1itw_A Isocitrate dehydrogenas 76.5 13 0.00045 34.0 9.1 121 7-140 462-592 (741)
36 3dlo_A Universal stress protei 57.4 21 0.00073 25.0 5.4 26 8-33 35-60 (155)
37 3s3t_A Nucleotide-binding prot 49.3 13 0.00044 25.2 3.0 26 8-33 15-40 (146)
38 3hgm_A Universal stress protei 48.2 14 0.00048 25.0 3.0 26 8-33 12-37 (147)
39 3fg9_A Protein of universal st 46.9 18 0.00062 24.9 3.5 26 8-33 27-52 (156)
40 3tnj_A Universal stress protei 44.2 14 0.00047 25.2 2.5 25 9-33 17-41 (150)
41 2z08_A Universal stress protei 43.6 18 0.00062 24.3 3.0 26 8-33 12-37 (137)
42 2af4_C Phosphate acetyltransfe 41.1 62 0.0021 26.4 6.4 94 6-106 178-288 (333)
43 1jmv_A USPA, universal stress 40.6 17 0.00058 24.5 2.5 25 9-33 13-37 (141)
44 3idf_A USP-like protein; unive 40.4 21 0.00071 23.9 2.9 27 8-34 11-38 (138)
45 2dum_A Hypothetical protein PH 38.3 19 0.00065 25.2 2.5 26 8-33 15-40 (170)
46 1mjh_A Protein (ATP-binding do 37.2 16 0.00056 25.3 1.9 26 8-33 15-40 (162)
47 3l49_A ABC sugar (ribose) tran 36.6 1.1E+02 0.0037 22.7 6.7 72 14-93 110-199 (291)
48 1q77_A Hypothetical protein AQ 34.1 19 0.00065 24.2 1.8 25 9-33 15-39 (138)
49 3cx5_E Cytochrome B-C1 complex 32.7 26 0.00088 26.5 2.5 26 125-150 145-170 (185)
50 1td9_A Phosphate acetyltransfe 31.1 2.1E+02 0.0072 23.1 8.9 94 6-106 179-288 (329)
51 1vmi_A Putative phosphate acet 30.2 1.1E+02 0.0039 25.2 6.3 94 6-106 185-295 (355)
52 1r5j_A Putative phosphotransac 29.5 2.2E+02 0.0076 22.9 8.7 96 5-107 182-293 (337)
53 3cis_A Uncharacterized protein 27.7 65 0.0022 24.8 4.2 26 8-33 181-206 (309)
54 1tq8_A Hypothetical protein RV 27.2 48 0.0017 23.3 3.1 24 8-32 27-50 (163)
55 2a2l_A Unknown; structural gen 27.1 61 0.0021 23.5 3.7 41 5-45 11-56 (145)
56 3fdx_A Putative filament prote 25.8 31 0.0011 23.0 1.8 23 11-33 16-38 (143)
57 3ab8_A Putative uncharacterize 25.8 46 0.0016 25.0 2.9 25 9-33 11-35 (268)
58 1pp9_E Ubiquinol-cytochrome C 25.5 34 0.0012 26.2 2.1 26 125-150 155-180 (196)
59 2ohh_A Type A flavoprotein FPR 23.8 2.1E+02 0.0071 22.7 6.7 83 11-103 240-327 (404)
60 4azs_A Methyltransferase WBDD; 23.1 2.5E+02 0.0086 24.2 7.5 55 26-96 88-145 (569)
61 1vf5_D Rieske iron-sulfur prot 22.2 66 0.0022 23.9 3.1 55 88-149 89-147 (179)
62 3ab8_A Putative uncharacterize 21.3 81 0.0028 23.5 3.5 26 8-33 164-189 (268)
63 3fpw_A HBPS, extracellular HAE 21.1 1.2E+02 0.0041 23.4 4.4 34 4-37 63-99 (192)
64 2nwf_A Ubiquinol-cytochrome C 21.0 59 0.002 23.4 2.5 25 125-149 100-124 (141)
65 3cis_A Uncharacterized protein 20.5 83 0.0028 24.2 3.5 26 8-33 29-54 (309)
No 1
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=1.4e-61 Score=413.40 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=136.1
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
-+++|++++|||+|+||+||++|+++||++||+|||+.||||||++|+||+ ++|| +|+++|++||++|||||+
T Consensus 148 ~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk~s~glf~~~~~eva-~eyp------~i~~~~~~vD~~~mqlv~ 220 (337)
T 1w0d_A 148 VSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVG-ECYP------DVEVAYQHVDAATIHMIT 220 (337)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCccchhhhHHHHHHHHHHH-HHCC------ceEEEEEEHHHHHHHHhh
Confidence 468999999999999999999997789999999999999999999999998 8999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCC-CeEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDG-KTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~-~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+|+++ .++||||+|||||||+||++|||+|++.|
T Consensus 221 ~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~~~~a~fEp~HGSAPdiAGk~iANP~A~IlS 291 (337)
T 1w0d_A 221 DPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMS 291 (337)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGGGTTSSCSCCHHHHHH
T ss_pred CcccccEEEECcchhHHHHHHHhhhcCCcccCceeEeCCCCCCceEEecCCCChhhhCCCCCcCCHHHHHH
Confidence 99999 99999999999999999999999999999999865 26999999999999999999999999865
No 2
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=100.00 E-value=6.3e-61 Score=408.91 Aligned_cols=140 Identities=23% Similarity=0.223 Sum_probs=134.6
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL 81 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv 81 (152)
-+++|++++|||+|+||+||++|++ +||++||+|||+.+|||||++|+||+ ++|| +|+++|++||++|||||
T Consensus 138 ~~~~T~~~~eRiar~AF~~A~~r~rkkvt~v~KaNvlk~t~glf~~~~~eva-~eyp------~I~~~~~~vD~~~m~lv 210 (333)
T 1x0l_A 138 DAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEVA-KDFP------LVNVQDIIVDNCAMQLV 210 (333)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTSTTCEEEEEECTTTCTTHHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHHHhcCCCeEEEEecCccchhhhHHHHHHHHHHH-HHCC------CceEEEEEHHHHHHHHh
Confidence 4689999999999999999999954 79999999999999999999999998 7999 99999999999999999
Q ss_pred hCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 82 KGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 82 ~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
++|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+|||||||+||++|||+|++.|
T Consensus 211 ~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~--~a~fEp~HGSAPdiaGk~iANP~A~IlS 279 (333)
T 1x0l_A 211 MRPERFDVIVTTNLLGDILSDLAAGLVGGLGLAPSGNIGDT--TAVFEPVHGSAPDIAGKGIANPTAAILS 279 (333)
T ss_dssp HCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECSS--CEEEEESSCCCGGGTTSSCCCCHHHHHH
T ss_pred hCcccceEEEEcCccchhHhHHHHhhcCCcccceeeEECCC--ceEEeCCCCChhhhcCCCCcCcHHHHHH
Confidence 999999 9999999999999999999999999999999987 4899999999999999999999999865
No 3
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=5.3e-61 Score=418.96 Aligned_cols=149 Identities=66% Similarity=1.107 Sum_probs=141.1
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
++++|++++|||+|+||+||++|+++||+|||+|||+.||||||++|+|||+++||++|.+++|+++|++||+||||||+
T Consensus 181 ~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~~I~~~~~~VD~~~mqlv~ 260 (413)
T 1lwd_A 181 GMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKYKIWYEHRLIDDMVAQVLK 260 (413)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHTTCCEEEEEHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCcchhhHHHHHHHHHHHHHHHhCCCcccCCeEEEEEEEHHHHHHHHhc
Confidence 46889999999999999999999889999999999999999999999999856999888888899999999999999999
Q ss_pred CCCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccc-----ccccc-CCccccccC
Q psy12309 83 GNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRH-----YRFLG-INDINTNVS 151 (152)
Q Consensus 83 ~P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdi-----agk~~-anp~~~~~~ 151 (152)
+|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+||||||| +||++ |||+|++.|
T Consensus 261 ~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~~~aGk~~~ANP~A~IlS 335 (413)
T 1lwd_A 261 SSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFA 335 (413)
T ss_dssp SCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred CCCceEEEecccccchHHHHHHhhcCCccccccceeCCCCCceEEeCCCCChhhhhhhhhcCCCCccChHHHHHH
Confidence 9999999999999999999999999999999999999986338999999999999 99997 999999865
No 4
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=7.5e-61 Score=412.33 Aligned_cols=140 Identities=23% Similarity=0.255 Sum_probs=134.9
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
-+++|++++|||+|+||+||++|+++||++||+|||+ ++||||++|+||+ ++|| +|+++|++||++|||||+
T Consensus 164 ~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~eyp------dI~~~~~~vD~~~m~lv~ 235 (363)
T 1cnz_A 164 TEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDVA-KTYP------DVELAHMYIDNATMQLIK 235 (363)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHH-HHCC------CceEeeeeHHHHHHHHhh
Confidence 3689999999999999999999977899999999999 8999999999998 8999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||||+||++|||+|++.|
T Consensus 236 ~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAPdiAGk~iANP~A~IlS 304 (363)
T 1cnz_A 236 DPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGGSAPDIAGKNIANPIAQILS 304 (363)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCGGGTTTTCSCCHHHHHH
T ss_pred CcccceEEEECCcchHHHHHHHHHhcCCCcccccceeCCCC-CeEEEcCCCChhhhcCCCccCcHHHHHH
Confidence 99999 99999999999999999999999999999999886 5899999999999999999999999865
No 5
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=100.00 E-value=7.1e-61 Score=412.13 Aligned_cols=139 Identities=25% Similarity=0.276 Sum_probs=134.2
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
+++|++++|||+|+||+||++|+++||+|||+|||+ ++||||++|+||+ ++|| +|+++|++||++|||||++
T Consensus 162 ~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-t~glf~~~~~eva-~eyp------dV~~~~~~VD~~am~lv~~ 233 (361)
T 3udu_A 162 EIYTKKEIERIARIAFESARIRKKKVHLIDKANVLA-SSILWREVVANVA-KDYQ------DINLEYMYVDNAAMQIVKN 233 (361)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCH-HHHHHHHHHHHHG-GGCT------TSEEEEEEHHHHHHHHHHC
T ss_pred EeccHHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-cchHHHHHHHHHH-HHCC------CCeEEeeeHHHHHHHHHhC
Confidence 578999999999999999999988999999999997 8999999999998 7999 9999999999999999999
Q ss_pred CCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 84 NGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 84 P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+|||||||+||++|||+|++.|
T Consensus 234 P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAPdIAGk~iANP~A~IlS 301 (361)
T 3udu_A 234 PSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKG-FGLYEPAGGSAPDIAHLNIANPIAQILS 301 (361)
T ss_dssp GGGCSEEEECHHHHHHHHHHHHHHHCCGGGCEEEEECTTS-CEEEEESSCCCGGGTTSSCCCCHHHHHH
T ss_pred cccCcEEEecchhHHHHHHHHHHhcCchhhcceeeeCCCC-CeeeecCCCChhhhcCCCccCCHHHHHH
Confidence 9999 99999999999999999999999999999999876 6999999999999999999999998865
No 6
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=100.00 E-value=1.2e-60 Score=411.17 Aligned_cols=141 Identities=18% Similarity=0.160 Sum_probs=135.1
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
+++|++++|||+|+||+||++|++ +||+|||+|||+.++||||++|+||+ ++|| +|+++|++||++|||||+
T Consensus 161 ~~~T~~~~eRIar~AFe~A~~r~~kkVt~v~KaNvlk~s~glf~~~~~eva-~eyp------dv~~~~~~vD~~am~lv~ 233 (364)
T 3flk_A 161 SIFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMA-AHYP------HVSWDKQHIDILCARFVL 233 (364)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHSSSCEEEEEECTTTSTTHHHHHHHHHHHHH-TTCT------TCEEEEEEHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHhcCCCeEEEEECcchhhhHHHHHHHHHHHHH-HHCC------CceEEeeEHHHHHHHHHh
Confidence 679999999999999999999987 69999999999999999999999998 8999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCC-eEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGK-TIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~-~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+|+++. ++||||+|||||||+||++|||+|++.|
T Consensus 234 ~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~~~~a~fEp~HGSAPdiAGk~iANP~A~IlS 304 (364)
T 3flk_A 234 QPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSAPDIFGKNIANPIAMIWS 304 (364)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECTTCSSCEEEEESSCCCTTTTTSSCCCCHHHHHH
T ss_pred CcccCcEEEecccchHHHHHHHHHhcCCcccccccccCCCCCcceEEecCCCCchhhcCCCccCcHHHHHH
Confidence 99999 999999999999999999999999999999998751 3899999999999999999999999865
No 7
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=4.9e-61 Score=417.97 Aligned_cols=148 Identities=43% Similarity=0.697 Sum_probs=140.2
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
++++|++++|||+|+||+||++|+++||++||+|||+.|||+||++|+|||+++||++|.+++|+++|++||++|||||+
T Consensus 178 ~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~~I~~~~~~vD~~~mqlv~ 257 (402)
T 2uxq_A 178 GIHNTVASIGHFARACFEYSLDQKIDCWFATKDTISKQYDQRFKIIFEEIFAQEYKEKFAAAGIEYFYTLIDDVVARMMK 257 (402)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHHTCCEEEEEHHHHHHHHTT
T ss_pred EEEECHHHHHHHHHHHHHHHHHcCCcEEEEECCCcchhhHHHHHHHHHHHHHHhCCCcccCCeEEEEEEEHHHHHHHHcc
Confidence 45789999999999999999999889999999999999999999999999866999877777799999999999999999
Q ss_pred CCCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccc-----ccccc-CCccccccC
Q psy12309 83 GNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRH-----YRFLG-INDINTNVS 151 (152)
Q Consensus 83 ~P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdi-----agk~~-anp~~~~~~ 151 (152)
+|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+||||||| +||++ |||+|++.|
T Consensus 258 ~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~lfEpvHGSAPdi~~~~~aGk~~~ANP~A~IlS 331 (402)
T 2uxq_A 258 TEGGMLWACKNYDGDVMSDMVASAFGSLAMMSSVLVSPYG-YFEYEAAHGTVQRHYYQHLKGERTSTNPVALIYA 331 (402)
T ss_dssp CCCCSEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTS-CEEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred CCCceEEEEcccchHHHHHHHHHhcCCccccccceecCCC-CeEEeCCCCChhhhhhhhhcCCCcccCcHHHHHH
Confidence 9999999999999999999999999999999999999986 48999999999998 89996 999999865
No 8
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=100.00 E-value=1.3e-60 Score=410.15 Aligned_cols=139 Identities=22% Similarity=0.295 Sum_probs=133.7
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
-+++|++++|||+|+||+||++|+++||++||+|||+ ++||||++|+||+ ++|| +|+++|++||+++||||+
T Consensus 159 ~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~eyp------dI~~~~~~vD~~~mqlv~ 230 (358)
T 1a05_A 159 TMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLE-TTRLWREVVTEVA-RDYP------DVRLSHMYVDNAAMQLIR 230 (358)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHG-GGCT------TSEEEEEEHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHH-HHCC------CceEEeeeHHHHHHHHHh
Confidence 3689999999999999999999977899999999999 8999999999998 8999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+| ++ ++||||+|||||||+||++|||+|++.|
T Consensus 231 ~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig-~~-~~~fEpvHGSAPdiAGk~iANP~A~IlS 298 (358)
T 1a05_A 231 APAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLG-EG-RAMYEPIHGSAPDIAGQDKANPLATILS 298 (358)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEEC-SS-CEEEEESSCCCGGGTTTTCSCCHHHHHH
T ss_pred CCCcccEEEecCcccHhHHHHHHhhcCCccccceeeeC-CC-ceeeecCCCChhHhcCCCccCcHHHHHH
Confidence 99999 99999999999999999999999999999999 54 7999999999999999999999999865
No 9
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=1.7e-60 Score=409.62 Aligned_cols=140 Identities=20% Similarity=0.238 Sum_probs=134.7
Q ss_pred CccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH
Q psy12309 2 FADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL 81 (152)
Q Consensus 2 ~~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv 81 (152)
.-+++|++++|||+|+||+||++|+++||++||+|||+ ++||||++|+||+ ++|| +|+++|++||++|||||
T Consensus 156 ~~~~~T~~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~eyp------dI~~~~~~VD~~~mqlv 227 (359)
T 2y3z_A 156 NTERYSKPEVERVARVAFEAARKRRKHVVSVDKANVLE-VGEFWRKTVEEVG-RGYP------DVALEHQYVDAMAMHLV 227 (359)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-ccHHHHHHHHHHH-HHCC------cEEEEeeEHHHHHHHHh
Confidence 35789999999999999999999977899999999999 8999999999998 8999 99999999999999999
Q ss_pred hCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 82 KGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 82 ~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
++|++| ||||+|||||||||++|+++|||||+||+|+|+++ +||||+|||||||+||++|||+|++.|
T Consensus 228 ~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~--~~fEpvHGSAPdiAGk~iANP~A~IlS 296 (359)
T 2y3z_A 228 RSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGT--PVFEPVHGSAPDIAGKGIANPTAAILS 296 (359)
T ss_dssp HCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSC--CEEEESSCCCGGGTTSSCSCTHHHHHH
T ss_pred hCcccccEEEEcCcchHHHHHHHHHhcCcccccceeEeCCCC--ceeecCCCChhhhCCCCCcCCHHHHHH
Confidence 999999 99999999999999999999999999999999985 599999999999999999999999865
No 10
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=100.00 E-value=3e-60 Score=415.62 Aligned_cols=146 Identities=21% Similarity=0.226 Sum_probs=136.4
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccc-------------cccCCeEEe
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQ-------------FEQAKIWYE 69 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~-------------f~~~~I~~~ 69 (152)
+++|++++|||+|+||+||++|+| +||+|||+|||+.||||||++|+|||+++||+. ++.++|+++
T Consensus 209 ~~~Tr~~~eRIar~AFe~A~~r~rkkVT~V~KaNVlk~tdglfr~~~~eva~~eypdv~~~~~~~~~~~~~~~~~~V~~~ 288 (427)
T 3dms_A 209 KPVSKEGTERLVRKAIQYAIDNDRKSVTLVHKGNIMKFTEGAFRDAGYALAQKEFGAELIDGGPWMKFKNPKTGNEIVVK 288 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHHHCCEESTTSSCEEEECTTTCCEEEEE
T ss_pred EEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhHHHHHHHHHHHHHhCCccccccccccccccccccCceEEE
Confidence 479999999999999999999865 799999999999999999999999996689951 244579999
Q ss_pred eeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCcccc
Q psy12309 70 HRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINT 148 (152)
Q Consensus 70 ~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~ 148 (152)
|++||++|||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+|||||||+||++|||+|+
T Consensus 289 ~~~VD~~amqlv~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~--~a~fEpvHGSAPdIAGk~iANP~A~ 366 (427)
T 3dms_A 289 DSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVGGIGIAPGANLSDS--VAMFEATHGTAPKYAGKDYVNPGSE 366 (427)
T ss_dssp EEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCTTTCEEEEECSS--CEEEEECSCCCGGGTTSSCSCCHHH
T ss_pred EeeHHHHHHHHhhCcccceEEEEcccccHHHHHHHHHhcCCccccceeeeCCC--cceEEeccCChhhhcCCCcCCcHHH
Confidence 999999999999999999 9999999999999999999999999999999977 6999999999999999999999999
Q ss_pred ccC
Q psy12309 149 NVS 151 (152)
Q Consensus 149 ~~~ 151 (152)
+.|
T Consensus 367 IlS 369 (427)
T 3dms_A 367 ILS 369 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 11
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=100.00 E-value=1.6e-60 Score=411.69 Aligned_cols=139 Identities=26% Similarity=0.296 Sum_probs=133.9
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
+++|++++|||+|+||+||++|+++||+|||+|||+ ++||||++|+||+ ++|| +|++++++||++|||||++
T Consensus 174 ~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-~~glf~~~~~eva-~eyp------dV~~~~~~VD~~am~lv~~ 245 (375)
T 3vmk_A 174 MRYSRKEIRRIAKIAFESAQGRRKKVTSVDKANVLA-CSVLWREVVEEVA-KDYP------DVELEHIYIDNATMQLLRR 245 (375)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHHC
T ss_pred EEEcHHHHHHHHHHHHHHHHHcCCcEEEEECchhhh-hhhHHHHHHHHHH-HHCC------CceEeeeeHHHHHHHHHhC
Confidence 579999999999999999999988999999999998 6699999999998 7999 9999999999999999999
Q ss_pred CCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 84 NGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 84 P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+|||||||+||++|||+|++.|
T Consensus 246 P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAPdIAGk~iANP~A~IlS 313 (375)
T 3vmk_A 246 PNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQG-FGMYEPAGGSAPDIAGQGIANPVAQILS 313 (375)
T ss_dssp GGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCTTTTTSSCSCCHHHHHH
T ss_pred cccCcEEEECchhHHHHHHHHHHhcCCccccceeeeCCCC-ceEEecCCCCchhccCCCccCcHHHHHH
Confidence 9999 99999999999999999999999999999999885 5999999999999999999999999865
No 12
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-60 Score=417.40 Aligned_cols=149 Identities=62% Similarity=1.011 Sum_probs=141.6
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
.+++|++++|||+|+||+||++|+++||++||+||||.|||+||++|+|||+++||++|++.+|+++|++||++|||||+
T Consensus 202 ~~~~T~~~~eRiar~AFe~A~~r~kkVt~v~KaNIlk~tdglfr~~~~eva~~eYp~~~~~~~I~~~~~~VD~~~mqlv~ 281 (427)
T 3us8_A 202 AMYNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFKAEKLWYEHRLIDDMVASALK 281 (427)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHTTCCEEEEEHHHHHHHHHH
T ss_pred EEeeCHHHHHHHHHHHHHHHHHcCCcEEEEECcccchhhhhHHHHHHHHHHHHhCccccCCCCeEEEEEEHHHHHHHHhh
Confidence 35789999999999999999999889999999999999999999999999955999999889999999999999999999
Q ss_pred CCCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCccc-----cccccc-CCccccccC
Q psy12309 83 GNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTR-----HYRFLG-INDINTNVS 151 (152)
Q Consensus 83 ~P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApd-----iagk~~-anp~~~~~~ 151 (152)
+|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||| |+||++ |||+|++.|
T Consensus 282 ~P~~FVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~a~fEp~HGSAPd~~~~~iAGk~i~ANP~A~IlS 356 (427)
T 3us8_A 282 WSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQHQKGEETSTNSIASIFA 356 (427)
T ss_dssp SCCCEEEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCCEEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred CCCCcEEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCeEEEeCCCCCcCCccchhcCCCCceeCHHHHHHH
Confidence 999999999999999999999999999999999999988634899999999999 999999 999999865
No 13
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=100.00 E-value=1.8e-60 Score=412.70 Aligned_cols=139 Identities=24% Similarity=0.277 Sum_probs=134.3
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
+++|++++|||+|+||+||++|+++||+|||+||| .+|||||++|+||+ ++|| +|++++++||++|||||++
T Consensus 181 ~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVl-~t~glfr~~~~eva-~eYP------dV~~~~~~VD~~amqLV~~ 252 (390)
T 3u1h_A 181 LLYTREEIERIIRKAFELALTRKKKVTSVDKANVL-ESSRLWREVAEEVA-KEYP------DVELEHMLVDNAAMQLIRN 252 (390)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTC-HHHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHHC
T ss_pred EEecHHHHhHHHHHHHHHHHHcCCceEEEECCccc-ccchHHHHHHHHHH-hHCC------CCeEEeeeHHHHHHHHHhC
Confidence 57899999999999999999998899999999999 69999999999998 7999 9999999999999999999
Q ss_pred CCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 84 NGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 84 P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+|||||||+||++|||+|++.|
T Consensus 253 P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAPDIAGk~iANP~A~IlS 320 (390)
T 3u1h_A 253 PRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDG-LGLYEPVHGSAPDIAGKGIANPLATILS 320 (390)
T ss_dssp GGGCSEEEECHHHHHHHHHHHHHHHSCTTTCEEEEEETTS-CEEEEESSCCCTTTTTSSCSCTHHHHHH
T ss_pred cccCcEEEecccchHHHHHHHHHhcCchhhcceeeecCCC-CeeEecCCCChhhhcCCCcCCcHHHHHH
Confidence 9999 99999999999999999999999999999999876 7999999999999999999999999865
No 14
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=1.3e-60 Score=417.91 Aligned_cols=148 Identities=64% Similarity=0.915 Sum_probs=140.0
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
.++|++++|||+|+||+||++|+++||+|||+|||+.||||||++|+||++++||++|++++|+++|++||++|||||++
T Consensus 198 ~~~T~~~ieRIar~AFe~A~~r~~kVt~v~KaNVlk~s~glfr~v~~eva~~eYpd~~~~~~I~~e~~~VD~~amqlV~~ 277 (427)
T 2qfy_A 198 MYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLIDDMVAQMIKS 277 (427)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHHTCCEEEEEHHHHHHHHHHS
T ss_pred EEEcHHHHHHHHHHHHHHHHHhCCceEEEECCccchhhhHHHHHHHHHHHHHhCCCcccCCeEEEEEEEHHHHHHHHHhC
Confidence 57899999999999999999998899999999999999999999999998679998888778999999999999999999
Q ss_pred CCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcc-----ccccccc-CCccccccC
Q psy12309 84 NGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVT-----RHYRFLG-INDINTNVS 151 (152)
Q Consensus 84 P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsAp-----diagk~~-anp~~~~~~ 151 (152)
|++|||||+|||||||||++|+++|||||+||+|+|+++..++|||+||||| ||+||++ |||+|++.|
T Consensus 278 P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~diAGk~~~ANP~A~IlS 351 (427)
T 2qfy_A 278 KGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFA 351 (427)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCCEEEECCSCCCHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred CCceEEEECccchHHHHHHHHHhcCcccccceeEeCCCCceeEecCCCCCcccccchhhcCCCCccCcHHHHHH
Confidence 9999999999999999999999999999999999998852389999999999 7899995 999999865
No 15
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=100.00 E-value=2e-60 Score=409.94 Aligned_cols=140 Identities=25% Similarity=0.292 Sum_probs=133.7
Q ss_pred cccchHHHHHHHHHHHHHHHhC-------------CCCEEEEeCCCcccccchHHHHHHHHHH--HhhcccccccCCeEE
Q psy12309 4 DSRPESTFWIFGKPTYNVALQK-------------KWPLYLSTKNTILKKYDGHFKDIFQEVY--EKNYKSQFEQAKIWY 68 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r-------------~~~Vt~v~KaNvl~~~dglf~~v~~eva--~~~yp~~f~~~~I~~ 68 (152)
+++|++++|||+|+||+||++| +++||+|||+|||+.++||||++|+||+ +++|| +|++
T Consensus 157 ~~~Tr~~~eRIar~AFe~A~~r~~~~~~~~~~~~~rkkVt~v~KaNVl~~s~glf~~~~~ev~~~a~eyp------dV~~ 230 (366)
T 3ty4_A 157 RRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYA------SINV 230 (366)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCSSCEEEEEECTTTCTTHHHHHHHHHHHHGGGCGGGT------TSEE
T ss_pred EEecHHHHHHHHHHHHHHHHhcCccccccccccCCCCeEEEEECCcchHhHHHHHHHHHHHHHHhHhhCC------CceE
Confidence 6799999999999999999998 4579999999999999999999999993 38999 9999
Q ss_pred eeeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccc
Q psy12309 69 EHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDIN 147 (152)
Q Consensus 69 ~~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~ 147 (152)
+|++||++|||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+|||||||+||++|||+|
T Consensus 231 ~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~--~a~fEpvHGSAPdIaGk~iANP~A 308 (366)
T 3ty4_A 231 DEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDN--FVMSEPVHGSAPDIAGRGIANPVA 308 (366)
T ss_dssp EEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHGGGSCGGGCCCEEECSS--CEEECCSSCCCTTTTTSSCCCCHH
T ss_pred EeeeHHHHHHHHHhCcccCcEEEECccchHHHHHHHHHhcCchhhhcceeeCCC--ceEEecCCCChhhcCCCCccCcHH
Confidence 9999999999999999999 9999999999999999999999999999999976 699999999999999999999999
Q ss_pred cccC
Q psy12309 148 TNVS 151 (152)
Q Consensus 148 ~~~~ 151 (152)
++.|
T Consensus 309 ~IlS 312 (366)
T 3ty4_A 309 TFRS 312 (366)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 16
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=100.00 E-value=3.6e-60 Score=408.33 Aligned_cols=138 Identities=22% Similarity=0.207 Sum_probs=133.2
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
-+++|++++|||+|+||+||++|+++||++||+|||+ ++||||++|+||+ ++|| +|++++++||++|||||+
T Consensus 168 ~~~~Tr~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-t~glf~~~~~eva-~eyp------dV~~~~~~VD~~~mqlv~ 239 (366)
T 1vlc_A 168 TMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLY-SSMLWRKVVNEVA-REYP------DVELTHIYVDNAAMQLIL 239 (366)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-cchHHHHHHHHHH-HHCC------CceEEeeeHHHHHHHHhh
Confidence 4689999999999999999999977899999999999 9999999999998 7999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+| + .+||||+|||||||+||++|||+|++.|
T Consensus 240 ~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig-~--~alfEpvHGSAPdIAGk~iANP~A~IlS 306 (366)
T 1vlc_A 240 KPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG-D--KNLYEPAGGSAPDIAGKNIANPIAQILS 306 (366)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEES-S--SEEEEESSCCCTTTTTTTCSCCHHHHHH
T ss_pred CcccceEEEEcchhHHHHHHHHHHhcCccccccEeeeC-C--ceeeecCCCchhhcCCCCccCcHHHHHH
Confidence 99999 99999999999999999999999999999999 5 5999999999999999999999999865
No 17
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=100.00 E-value=5.1e-60 Score=405.34 Aligned_cols=141 Identities=19% Similarity=0.149 Sum_probs=133.3
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL 81 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv 81 (152)
-+++|++++|||+|+||+||++|++ +||++||+|||+.+|||||++|+||++++|| +|+++|++||++|||||
T Consensus 151 ~~~~T~~~~eRiar~AF~~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~~eyp------~i~~~~~~vD~~~~qlv 224 (349)
T 3blx_A 151 LKVMTRPKTERIARFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYP------DIDVSSIIVDNASMQAV 224 (349)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTHHHHHHHHHHHHHHHHCT------TSEEEEEEHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHHHHHHhcCCCcEEEEeCCccchhhHHHHHHHHHHHHHhhCC------CeeEEEeeHHHHHHHHh
Confidence 3689999999999999999999955 7999999999999999999999999867999 99999999999999999
Q ss_pred hCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCC-CCcccccccccCCccccccC
Q psy12309 82 KGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAH-GTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 82 ~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~H-GsApdiagk~~anp~~~~~~ 151 (152)
++|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+| ||||||+||++|||+|++.|
T Consensus 225 ~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~--~a~fEpvH~GSAPdiAGk~iANP~A~IlS 294 (349)
T 3blx_A 225 AKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGANFGRD--YAVFEPGSRHVGLDIKGQNVANPTAMILS 294 (349)
T ss_dssp HCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEEESS--CEEECCTTTTSCC--CCTTCSCCHHHHHH
T ss_pred hCcccccEEEECCcchHHHHHHHHhhcCCcccceEEEECCC--ceeEcCCCCCchhhhcCCCCCCcHHHHHH
Confidence 999999 9999999999999999999999999999999988 48999999 99999999999999999865
No 18
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-60 Score=412.00 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=133.6
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
+++|++++|||+|+||+||++|+++||+|||+|||+.+ ||||++|+||+ ++|| +|+++|++||++|||||++
T Consensus 202 ~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVlk~s-glf~~~~~eva-~eYP------dV~~~~~~VD~~amqLV~~ 273 (405)
T 3r8w_A 202 EVYAAHEIDRIARVAFETARKRRGKLCSVDKANVLEAS-ILWRKRVTALA-SEYP------DVELSHMYVDNAAMQLVRD 273 (405)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHH-HHHHHHHHHHG-GGST------TSEEEEEEHHHHHHHHHHC
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCeEEEEECchhhccc-cHHHHHHHHHH-hHCC------CCeEEeeeHHHHHHHHHhC
Confidence 57999999999999999999888899999999999955 99999999997 8999 9999999999999999999
Q ss_pred CCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 84 NGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 84 P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+|||||||+||++|||+|++.|
T Consensus 274 P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSAPDIAGk~iANP~A~IlS 341 (405)
T 3r8w_A 274 PKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSG-PGLFEPIHGSAPDIAGQDKANPLATILS 341 (405)
T ss_dssp GGGCSEEEECHHHHHHHHHHHHHHHSCGGGCEEEEECSSS-CCEEEESSCCCGGGTTTTCCCCHHHHHH
T ss_pred hhhCcEEeecchhhHHHHHHHHHhcCcccccceeeecCCC-CeEEecCCCChhhhCCCCCCCcHHHHHH
Confidence 9999 99999999999999999999999999999999886 6999999999999999999999999865
No 19
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=100.00 E-value=2.8e-59 Score=407.71 Aligned_cols=146 Identities=21% Similarity=0.241 Sum_probs=136.1
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhccccc-----------ccCCeEEeee
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQF-----------EQAKIWYEHR 71 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f-----------~~~~I~~~~~ 71 (152)
+++|++++|||+|+||+||++|++ +||+|||+|||+.|||+||++|+||++++||++| ++.+|+++|+
T Consensus 192 ~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~I~~~~~ 271 (409)
T 2e0c_A 192 KVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMKYTEGAFREWAYEVALKEYRDFIVTEEEINQGKPDQGKIILNDR 271 (409)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTTHHHHHHHHHHHHHHHSTTTEEEHHHHTTTCCCTTSEEEEEE
T ss_pred EEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhhHHHHHHHHHHHHhCCCccccccccccccccCCeEEEEEE
Confidence 468999999999999999999966 6999999999999999999999999955999644 2234999999
Q ss_pred eHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCcccccc
Q psy12309 72 LIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNV 150 (152)
Q Consensus 72 ~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~ 150 (152)
+||++|||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+||||||||||++|||+|++.
T Consensus 272 ~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~--~a~fEp~HGSAPdiAGk~iANP~A~Il 349 (409)
T 2e0c_A 272 IADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALIGNIGMLGGANIGDE--GGMFEAIHGTAPKYAGKNVANPTGIIK 349 (409)
T ss_dssp EHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEEETT--EEEEEESSCCCGGGTTTTCSCTHHHHH
T ss_pred EHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCcccCceEEECCC--ceEEecCCCChhhhcCCcccCcHHHHH
Confidence 9999999999999999 9999999999999999999999999999999976 699999999999999999999999986
Q ss_pred C
Q psy12309 151 S 151 (152)
Q Consensus 151 ~ 151 (152)
|
T Consensus 350 S 350 (409)
T 2e0c_A 350 A 350 (409)
T ss_dssp H
T ss_pred H
Confidence 5
No 20
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=100.00 E-value=2.1e-59 Score=402.22 Aligned_cols=140 Identities=24% Similarity=0.242 Sum_probs=134.6
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL 81 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv 81 (152)
-+++|++++|||+|+||+||++|++ +||++||+|||+.+|||||++|+||+ ++|| +|+++|++||++|||||
T Consensus 157 ~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva-~eyp------dI~~~~~~vD~~~m~lv 229 (354)
T 3blx_B 157 IKLITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELS-KEYP------DLTLETELIDNSVLKVV 229 (354)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHHG-GGCT------TSEEEEEEHHHHHHHHH
T ss_pred EEEEcHHHHHHHHHHHHHHHHhcCCCeEEEEECCcchHhHHHHHHHHHHHHH-HHCC------CceEEEEEHHHHHHHHh
Confidence 4689999999999999999999954 79999999999999999999999998 8999 99999999999999999
Q ss_pred hCCCCe---EEEecCCchhhhhhhhhhh-cCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 82 KGNGGF---VWACKNYDGDVQSDIVAQG-YGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 82 ~~P~~f---Viv~~Nl~GDIlSDlaa~l-~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
++|++| ||||+|||||||||++|++ +|||||+||+|+|++ ++||||+|||||||+||++|||+|++.|
T Consensus 230 ~~P~~FD~~Vivt~NlfGDIlSD~aa~l~~GslGl~pSanig~~--~a~fEp~HGSAPdiAGk~iANP~A~IlS 301 (354)
T 3blx_B 230 TNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIGHK--ISIFEAVHGSAPDIAGQDKANPTALLLS 301 (354)
T ss_dssp HCGGGGTTEEEEECHHHHHHHHHHHHHHHTSSGGGCEEEEEESS--CEEEEECSCCCGGGTTTTCCCTHHHHHH
T ss_pred hChhhCCceEEEecCcccchhHHHHHhhccCCccccceeEECCC--ceEEecCCCChhhhcCCCccCcHHHHHH
Confidence 999999 9999999999999999999 999999999999988 4899999999999999999999999765
No 21
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=2e-59 Score=407.86 Aligned_cols=149 Identities=48% Similarity=0.776 Sum_probs=129.7
Q ss_pred CccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH
Q psy12309 2 FADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL 81 (152)
Q Consensus 2 ~~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv 81 (152)
+++++|++++|||+|+||+||++|+++||++||+||||.|||+||++|+|||+++||++|++.+|+++|++||++|||||
T Consensus 178 ~~~~~t~~~~eRiar~AF~~A~~~~~~vt~v~KaNilk~tdglf~~~~~eva~~eyp~~~~~~~i~~~~~~vD~~~~~lv 257 (402)
T 4aoy_A 178 MGMHNTDKSIRSFARACFNYALDMNQDLWFSTKDTISKTYDHRFKDIFQEIYENEYKEKFEAKNLQYFYTLIDDAVARII 257 (402)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSHHHHHHHHHHHHHHHHHHTHHHHHHTTCCEEEEEHHHHHHHHH
T ss_pred EEEEecHHHHHHHHHHHHHHHHHcCCcEEEEECCccchhhhhHHHHHHHHHHHHhCcccccCCCeEEEEEEHHHHHHHHh
Confidence 35788999999999999999999999999999999999999999999999996599999999999999999999999999
Q ss_pred hCCCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCccc-----cccccc-CCccccccC
Q psy12309 82 KGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTR-----HYRFLG-INDINTNVS 151 (152)
Q Consensus 82 ~~P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApd-----iagk~~-anp~~~~~~ 151 (152)
++|++|||||+|||||||||++|+++|||||+||+|+|+++ +++|||+|||||| |+||++ |||+|++.|
T Consensus 258 ~~P~~fVivt~Nl~GDIlSD~~A~l~GslGl~psanig~~~-~~~fEp~HGSApd~~~~~iaGk~~~aNP~A~Ils 332 (402)
T 4aoy_A 258 RSEGGMVWACKNYDGDVMSDMVASAFGSLAMMTSVLVSPDG-KYEFEAAHGTVTRHYYKHLKGEETSTNSMATIFA 332 (402)
T ss_dssp TSCBCSEEECCC-CHHHHHHHHHHHHSCTTSEEEEEECTTC-CEEEEC-----------------CCCCCHHHHHH
T ss_pred hCCCCcEEEECCcchHHHHHHHHHhcCchhhccccccCCCC-ceEEeeccCCccccchhhccCCCcCcCcHHHHHH
Confidence 99999999999999999999999999999999999999887 6999999999999 899998 999999864
No 22
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.5e-59 Score=407.36 Aligned_cols=146 Identities=23% Similarity=0.251 Sum_probs=136.0
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhccccc--------------ccCCeEE
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQF--------------EQAKIWY 68 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f--------------~~~~I~~ 68 (152)
+.+|++++|||+|+||+||++|++ +||+|||+|||+.|+|+||++|+|||+++||++| ++.+|++
T Consensus 192 ~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~I~~ 271 (412)
T 2iv0_A 192 KPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRDWGYEVAKQEFGEYCITEDELWDKYGGKQPEGKIVV 271 (412)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHHHHHHHHHHHHHHSTTTEECHHHHHHHHTTCCCTTCEEE
T ss_pred EEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhHHHHHHHHHHHHHhCCCccccccchhhhccccccCCeEEE
Confidence 468999999999999999999976 6999999999999999999999999955999644 2234999
Q ss_pred eeeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccc
Q psy12309 69 EHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDIN 147 (152)
Q Consensus 69 ~~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~ 147 (152)
+|++||++|||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+||||||||||++|||+|
T Consensus 272 ~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapsanig~~--~a~fEp~HGSAPdiAGk~iANP~A 349 (412)
T 2iv0_A 272 KDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGIAPGSNIGDG--IGVFEPVHGSAPKYAGQNKVNPTA 349 (412)
T ss_dssp EEEEGGGHHHHHHHSGGGCCEEEECHHHHHHHHHHHHHHTTCGGGCEEEEEETT--EEEEEESSCCCSTTTTSSCSCCHH
T ss_pred EEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCccccceEEECCC--ceEEeCCCCChhhcCCCcccCcHH
Confidence 9999999999999999999 9999999999999999999999999999999965 799999999999999999999999
Q ss_pred cccC
Q psy12309 148 TNVS 151 (152)
Q Consensus 148 ~~~~ 151 (152)
++.|
T Consensus 350 ~IlS 353 (412)
T 2iv0_A 350 EILT 353 (412)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 23
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00 E-value=4.2e-59 Score=409.07 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=136.2
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhccc-cc-------------ccCCeEE
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKS-QF-------------EQAKIWY 68 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~-~f-------------~~~~I~~ 68 (152)
+++|++++|||+|+||+||++|++ +||+|||+|||+.|+|+||++|+|||+++||+ .| ++.+|++
T Consensus 202 ~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~eva~~eypd~~~~e~~~~~~~~~~~~~~~I~~ 281 (435)
T 1tyo_A 202 KPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAYEVALEKFREHVVTEQEVQEKYGGVRPEGKILV 281 (435)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTTTSTTTHHHHHHHHHHHHHHHSGGGEEEHHHHHHHSTTCCCTTCEEE
T ss_pred EEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCccchhhhHHHHHHHHHHHHHhCCCcccccccccccccccccCCeEEE
Confidence 689999999999999999999854 79999999999999999999999999559996 22 3345999
Q ss_pred eeeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccc
Q psy12309 69 EHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDIN 147 (152)
Q Consensus 69 ~~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~ 147 (152)
+|++||+++||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+|||||||+||++|||+|
T Consensus 282 ~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapSanig~~--~a~fEpvHGSAPdiAGk~iANP~A 359 (435)
T 1tyo_A 282 NDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAGMNMGDG--IAVAEPVHGTAPKYAGKDLINPSA 359 (435)
T ss_dssp EEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECSS--CEEEEESSCCCGGGTTSSCSCCHH
T ss_pred EeeeHHHHHHHHhhCCCCceEEEEcccchHHHHHHHHhhcCCcccCceeeECCC--ceeeecCCCChHHhcCCCCcCcHH
Confidence 9999999999999999999 9999999999999999999999999999999987 589999999999999999999999
Q ss_pred cccC
Q psy12309 148 TNVS 151 (152)
Q Consensus 148 ~~~~ 151 (152)
++.|
T Consensus 360 ~IlS 363 (435)
T 1tyo_A 360 EILS 363 (435)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 24
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=8.9e-59 Score=406.45 Aligned_cols=145 Identities=22% Similarity=0.220 Sum_probs=135.4
Q ss_pred ccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccc---------------------
Q psy12309 5 SRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFE--------------------- 62 (152)
Q Consensus 5 ~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~--------------------- 62 (152)
++|++++|||+|+||+||++|++ +||+|||+|||+.|+||||++|+||++++||+.+.
T Consensus 200 ~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T 2d4v_A 200 PVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEGGFRDWGYALAEREFAGRVFTWRQKAAISKAEGKAAGQKAE 279 (429)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHHSTTTEEEHHHHHHHHHHHCHHHHHHHH
T ss_pred EecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhHHHHHHHHHHHHHhCCCccccccccccccccccccccchhc
Confidence 68999999999999999999966 69999999999999999999999999559996441
Q ss_pred -----cCCeEEeeeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCccc
Q psy12309 63 -----QAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTR 136 (152)
Q Consensus 63 -----~~~I~~~~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApd 136 (152)
+.+|+++|++||+++||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++||||+||||||
T Consensus 280 ~~~~~~~~I~~~~~~vD~~~mqlv~~P~~fDVivt~NlfGDILSD~aA~l~GslGl~pSanig~~--~a~fEpvHGSAPd 357 (429)
T 2d4v_A 280 QQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNGDYVSDALAAEVGGIGMAPGANLSDT--HAIFEATHGTAPD 357 (429)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCGGGCCCEEECSS--CEEEECSCCCCTT
T ss_pred cccccCCeeEEEEeeHHHHHHHHhhCcccCcEEEECCcccHHHHHHHHHhcCCHhhcCeeEECCC--ceEEecCCCChhH
Confidence 2349999999999999999999999 9999999999999999999999999999999975 6999999999999
Q ss_pred ccccccCCccccccC
Q psy12309 137 HYRFLGINDINTNVS 151 (152)
Q Consensus 137 iagk~~anp~~~~~~ 151 (152)
||||++|||+|++.|
T Consensus 358 iAGk~iANP~A~IlS 372 (429)
T 2d4v_A 358 IAGQGKANPSSLILS 372 (429)
T ss_dssp TTTTTCCCCHHHHHH
T ss_pred hcCCCCcCcHHHHHH
Confidence 999999999999865
No 25
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=100.00 E-value=9.2e-59 Score=405.84 Aligned_cols=148 Identities=24% Similarity=0.275 Sum_probs=136.1
Q ss_pred cccchHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhhccccc---------------------
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQF--------------------- 61 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f--------------------- 61 (152)
+++|++++|||+|+||+||++|++ +||+|||+|||+.|+|+||++|+||++++||+..
T Consensus 190 ~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
T 1hqs_A 190 KPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEKEYGDKVFTWAQYDRIAEEQGKDAANKA 269 (423)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHHHGGGEEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHHHHcCCCcEEEEECCccchhhhHHHHHHHHHHHHHhCCCcccchhhhccccccccccccccc
Confidence 689999999999999999999854 7999999999999999999999999955999621
Q ss_pred -----ccCCeEEeeeeHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcc
Q psy12309 62 -----EQAKIWYEHRLIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVT 135 (152)
Q Consensus 62 -----~~~~I~~~~~~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsAp 135 (152)
++++|+++|++||+++||||++|++| ||||+|||||||||++|+++|||||+||+|+|++..++||||+|||||
T Consensus 270 ~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGl~pSanigp~~~~alfEp~HGSAP 349 (423)
T 1hqs_A 270 QSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAP 349 (423)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCTTTCEEEEECTTTCCEEEEESCCCCG
T ss_pred cccccccCeEEEEEeeHHHHHHHHhhCCCCccEEEECCcchHHHHHHHHhhcCCcccCccceecCCCCceEEecCCCChh
Confidence 44459999999999999999999999 999999999999999999999999999999995222699999999999
Q ss_pred cccccccCCccccccC
Q psy12309 136 RHYRFLGINDINTNVS 151 (152)
Q Consensus 136 diagk~~anp~~~~~~ 151 (152)
||+||++|||+|++.|
T Consensus 350 diAGk~iANP~A~IlS 365 (423)
T 1hqs_A 350 KYAGLDKVNPSSVILS 365 (423)
T ss_dssp GGTTTTCSCCHHHHHH
T ss_pred hhCCCCCcCcHHHHHH
Confidence 9999999999999865
No 26
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=100.00 E-value=9.7e-59 Score=395.80 Aligned_cols=137 Identities=23% Similarity=0.198 Sum_probs=131.6
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHhC
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALKG 83 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~~ 83 (152)
+++|++++|||+|+||+||++|+++||++||+|||+.|||+||++|+||+ ++ +|+++|++||+++||||++
T Consensus 139 ~~~T~~~~eRiar~AF~~A~~rrkkvt~v~KaNvlk~t~glf~~~~~eva-~~--------~I~~~~~~vD~~~~~lv~~ 209 (336)
T 1wpw_A 139 KIITRFASERIAKVGLNFALRRRKKVTCVHKANVMRITDGLFAEACRSVL-KG--------KVEYSEMYVDAAAANLVRN 209 (336)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCTTHHHHHHHHHHHHH-TT--------TSEEEEEEHHHHHHHHHHC
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCeEEEEECCcchhhhhHHHHHHHHHHH-Hh--------CceeEEEeHHHHHHHHhhC
Confidence 58999999999999999999997789999999999999999999999998 54 7999999999999999999
Q ss_pred CCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 84 NGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 84 P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+|||||||+||++|||+|++.|
T Consensus 210 P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~--~a~fEp~HGSApdiaGk~iANP~A~IlS 276 (336)
T 1wpw_A 210 PQMFDVIVTENVYGDILSDEASQIAGSLGIAPSANIGDK--KALFEPVHGAAFDIAGKNIGNPTAFLLS 276 (336)
T ss_dssp GGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECSS--CEEEEESSCCCTTTTTSSCCCTHHHHHH
T ss_pred cccceEEEEcCcchHHHHHHHHHhcCCccccceEEECCC--CceEeCCCCCchhhCCCCCcCcHHHHHH
Confidence 9999 9999999999999999999999999999999987 4899999999999999999999999865
No 27
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=1.2e-58 Score=402.68 Aligned_cols=144 Identities=44% Similarity=0.693 Sum_probs=134.1
Q ss_pred ccccchHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHh---hcccccccCCeEEeeeeHHHHHHH
Q psy12309 3 ADSRPESTFWIFGKPTYNVALQKKWPLYLSTKNTILKKYDGHFKDIFQEVYEK---NYKSQFEQAKIWYEHRLIDDMVAQ 79 (152)
Q Consensus 3 ~~~~t~~~~eRiar~AF~~A~~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~---~yp~~f~~~~I~~~~~~iD~~~~~ 79 (152)
+.++|++++|||+|+||+||++|+++||+|||+|||+.|||+||++|+|||++ +|| +.+|+++|++||++|||
T Consensus 177 ~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNvlk~sdglf~~~~~eva~~~~~~yp----~~~I~~~~~~vD~~~mq 252 (399)
T 1zor_A 177 AMHNLEKSIRSFAQSCINYAISEKVDIWFATKDTISKVYHAYFKDIFQEEVDKRKEELE----KAGVNYRYMLIDDAAAQ 252 (399)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTCTTHHHHHHHHHHHHHHHTHHHHH----HTTCCEEEEEHHHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCeEEEEECcccHHHHHHHHHHHHHHHHHhhcccCC----CCcEEEEEEEHHHHHHH
Confidence 45789999999999999999999889999999999999999999999999842 666 33699999999999999
Q ss_pred HHhCCCCeEEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCccc-----cccccc-CCccccccC
Q psy12309 80 ALKGNGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTR-----HYRFLG-INDINTNVS 151 (152)
Q Consensus 80 lv~~P~~fViv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApd-----iagk~~-anp~~~~~~ 151 (152)
||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||| |+||++ |||+|++.|
T Consensus 253 lv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~~fEpvHGSAPdi~~~~iaGk~~~ANP~A~IlS 329 (399)
T 1zor_A 253 ILRSEGGMLWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDG-VYEFEAAHGTVRRHYYRYLKGEKTSTNPTASIFA 329 (399)
T ss_dssp HHHSCCCSEEEECHHHHHHHHHHHHHHHCCGGGEEEEEECTTC-CEEEEESSCCCHHHHHHHTTTCCCCCCCHHHHHH
T ss_pred hccCCCceEEEEccchHHHHHHHHHHhcCCccccceeEecCCC-CeEEeCCCCcccccchhhhcCCCCccCcHHHHHH
Confidence 9999999999999999999999999999999999999999986 4899999999999 689996 999999865
No 28
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-58 Score=409.49 Aligned_cols=139 Identities=24% Similarity=0.250 Sum_probs=133.8
Q ss_pred cccchHHHHHHHHHHHHHHHhCC-CCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHHh
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKK-WPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQALK 82 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~-~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv~ 82 (152)
+++|++++|||+|+||+||++|+ ++||++||+|||+.+|||||++|+||+ ++|| +|+++|++||+++||||+
T Consensus 160 ~v~Tr~~ieRIar~AFe~A~~r~rkkVT~V~KaNVlk~sdGlfr~v~~eVa-~eYP------dI~~e~~~VD~~amqLV~ 232 (496)
T 2d1c_A 160 KLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVA-QEYP------DIEAVHIIVDNAAHQLVK 232 (496)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHHH-TTCT------TSEEEEEEHHHHHHHHHH
T ss_pred EEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCCchhhHHHHHHHHHHHHH-HHCC------CceEEEEeHHHHHHHHhh
Confidence 46999999999999999999995 579999999999999999999999997 8999 999999999999999999
Q ss_pred CCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccccC
Q psy12309 83 GNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTNVS 151 (152)
Q Consensus 83 ~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~~~ 151 (152)
+|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+||||||||||++|||+|++.|
T Consensus 233 ~P~~FDVIVt~NLfGDILSDlaA~l~GslGlapSanig~~--~a~FEpvHGSAPDIAGk~iANP~A~IlS 300 (496)
T 2d1c_A 233 RPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE--VAIFEAVHGSAPKYAGKNVINPTAVLLS 300 (496)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEECSS--CEEEEESSCCCTTTTTSSCCCCHHHHHH
T ss_pred CcCcceEEEECCcchHHHHHHHHHhcCCcccCcEEEECCC--CceeeCCCCchhhhcCCCccCcHHHHHH
Confidence 99999 9999999999999999999999999999999988 4899999999999999999999999865
No 29
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=90.56 E-value=0.064 Score=45.28 Aligned_cols=24 Identities=17% Similarity=0.001 Sum_probs=20.9
Q ss_pred EEEecCCCCcccccccccCCcccc
Q psy12309 125 IESEAAHGTVTRHYRFLGINDINT 148 (152)
Q Consensus 125 a~fEp~HGsApdiagk~~anp~~~ 148 (152)
.---|.||||-|||||++|||..+
T Consensus 308 iRtS~dHGta~diagkg~a~~~s~ 331 (349)
T 4aty_A 308 LFSSVGHGSGFDIAGTLLADPAPL 331 (349)
T ss_dssp EEEECCSCCCTTSTTTTCCCCHHH
T ss_pred eEeCCCCChhhhhccCCCCChHHH
Confidence 456899999999999999999754
No 30
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=88.94 E-value=0.11 Score=44.10 Aligned_cols=125 Identities=10% Similarity=-0.052 Sum_probs=71.1
Q ss_pred ccchHHHHHHHHHHHHHHHh-CC--C-CEEEEeCCCcccccchHH--------HHHHHHHHHhhcccccccCCeEEe-ee
Q psy12309 5 SRPESTFWIFGKPTYNVALQ-KK--W-PLYLSTKNTILKKYDGHF--------KDIFQEVYEKNYKSQFEQAKIWYE-HR 71 (152)
Q Consensus 5 ~~t~~~~eRiar~AF~~A~~-r~--~-~Vt~v~KaNvl~~~dglf--------~~v~~eva~~~yp~~f~~~~I~~~-~~ 71 (152)
..|.+.+.+.++.+.+--++ -+ + ||-+.- =|==.--.|+| +-..++. +++ +|.++ ..
T Consensus 179 ~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~l-r~~--------Gi~~~GP~ 248 (334)
T 3lxy_A 179 AITQASLHEVITILDNDLKTKFGITQPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTL-RQQ--------GINLIGPL 248 (334)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHH-HHT--------TCCEEEEE
T ss_pred hCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHH-HHC--------CCceeCCC
Confidence 35778888888877765554 23 2 454431 11111123444 2233333 222 67664 66
Q ss_pred eHHHHHHHHHhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCC-eEEEecCCCCcccccccccCCcccc
Q psy12309 72 LIDDMVAQALKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGK-TIESEAAHGTVTRHYRFLGINDINT 148 (152)
Q Consensus 72 ~iD~~~~~lv~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~-~a~fEp~HGsApdiagk~~anp~~~ 148 (152)
-.|++-.+-.+ ++| ++||...+ .+---.=-+++--+.|+-- |. ..---|.||||-|||||++|||..+
T Consensus 249 paDt~F~~~~~--~~~D~vlaMYHD------QGlip~K~l~F~~gVNvTl-GLP~iRTS~DHGTAfDIAGkG~A~~~S~ 318 (334)
T 3lxy_A 249 PADTLFQPKYL--QHADAVLAMYHD------QGLPVLKYQGFGRAVNITL-GLPFIRTSVDHGTALELAATGTADVGSF 318 (334)
T ss_dssp CHHHHTSHHHH--TTCSEEEESSHH------HHHHHHHHHHTTCCEEEEE-SSSSCEEEESSCCCGGGTTTTCSCCHHH
T ss_pred ChHHhcChhhh--ccCCEEEEcccc------hhhHhHHhcccCccEEEec-CCCeeeecCCCCcchhhccCCCCChHHH
Confidence 78887655554 688 88887664 3222222233334455421 11 2456899999999999999999764
No 31
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=88.92 E-value=0.1 Score=44.06 Aligned_cols=132 Identities=10% Similarity=-0.037 Sum_probs=69.5
Q ss_pred cchHHHHHHHHHHHHHHHh-CC--CCEEEEeCCCcccccchHH-HHHHHHHHHhhcccccccCCeEEe-eeeHHHHHHHH
Q psy12309 6 RPESTFWIFGKPTYNVALQ-KK--WPLYLSTKNTILKKYDGHF-KDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVAQA 80 (152)
Q Consensus 6 ~t~~~~eRiar~AF~~A~~-r~--~~Vt~v~KaNvl~~~dglf-~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~~l 80 (152)
.|.+.+.+.++...+--++ -+ ++-..|-==|==.--+|+| +|..+.+.-. - ++..+.+|.+. ..-.|++-.+-
T Consensus 175 it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~Pa-i-~~~r~~Gi~~~GP~paDT~F~~~ 252 (328)
T 1yxo_A 175 ISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPC-L-ERLRGEGLDLIGPLPADTLFTPK 252 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGTTTTTCSHHHHTHHHH-H-HHHHTTTCEEEEEECHHHHTSHH
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHH-H-HHHHHCCCceeCCCCchhhcccc
Confidence 5777788777777764443 23 2323333233222224555 3322221100 0 01112277663 66678776554
Q ss_pred HhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCC-eEEEecCCCCcccccccccCCcccc
Q psy12309 81 LKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGK-TIESEAAHGTVTRHYRFLGINDINT 148 (152)
Q Consensus 81 v~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~-~a~fEp~HGsApdiagk~~anp~~~ 148 (152)
.+ ++| ++|| ||= |.+---.=-+|+--+.|+-- |. ..---|-||||-|||||++|||..+
T Consensus 253 ~~--~~~D~vla--MYH----DQGlip~K~l~F~~gVNvTl-GLP~iRTSvDHGTAfDIAGkG~A~~~Sl 313 (328)
T 1yxo_A 253 HL--EHCDAVLA--MYH----DQGLPVLKYKGFGAAVNVTL-GLPIIRTSVDHGTALDLAGSGRIDSGSL 313 (328)
T ss_dssp HH--TTCSEEEE--SSH----HHHHHHHHHHHTTSCEEEEE-SSSSCEEEECSCCCGGGTTTCCCCCHHH
T ss_pred cc--cCCCEEEE--ccc----ccccHhHhhcccCcceEEec-CCCEEEecCCCCccccccCCCCCChHHH
Confidence 44 577 5554 342 45333333334444555521 11 3456899999999999999999754
No 32
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=88.55 E-value=0.11 Score=44.05 Aligned_cols=133 Identities=12% Similarity=-0.007 Sum_probs=74.3
Q ss_pred ccchHHHHHHHHHHHHHHHhCC--CCEEEEeCCCcccccchHH-HHHHHHHHHhhcccccccCCeEEe-eeeHHHHHHHH
Q psy12309 5 SRPESTFWIFGKPTYNVALQKK--WPLYLSTKNTILKKYDGHF-KDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVAQA 80 (152)
Q Consensus 5 ~~t~~~~eRiar~AF~~A~~r~--~~Vt~v~KaNvl~~~dglf-~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~~l 80 (152)
..|.+.+.+.++...++-++-+ ++-..|-==|==.--.|+| +|-.+.+.-. - ++..+.+|.+. ..-.|++-.+-
T Consensus 181 ~it~e~i~~~i~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PA-i-~~~r~~Gi~~~GP~paDT~F~~~ 258 (330)
T 2hi1_A 181 TLSTARVETVIGIADTFLKRVGYVKPRIAVAGVNPHAGENGLFGDEETRILTPA-I-TDARAKGMDVYGPCPPDTVFLQA 258 (330)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTTCSSCEEEEECSSGGGSSTTSCCHHHHHTHHHH-H-HHHHTTTCEEEEEECHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHHH-H-HHHHHCCCceeCCCCchhhcccc
Confidence 3688888888888888333233 2333333334222224555 4432222100 0 01112377764 67788876555
Q ss_pred HhCCCCe-EEEecCCchhhhhhhhhhhcCCCccccccccCCCCC-eEEEecCCCCcccccccccCCcccc
Q psy12309 81 LKGNGGF-VWACKNYDGDVQSDIVAQGYGSLGLMTSILMCPDGK-TIESEAAHGTVTRHYRFLGINDINT 148 (152)
Q Consensus 81 v~~P~~f-Viv~~Nl~GDIlSDlaa~l~GglGl~psanig~~~~-~a~fEp~HGsApdiagk~~anp~~~ 148 (152)
.+ ++| ++|| || =|.+---.=-+|+--+.|+-- |. ..---|-||||-|||||++|||..+
T Consensus 259 ~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTl-GLP~iRTSvDHGTAfDIAGkG~A~~~Sl 319 (330)
T 2hi1_A 259 YE--GQYDMVVA--MY----HDQGHIPLKLLGFYDGVNITA-GLPFIRTSADHGTAFDIAWTGKAKSESM 319 (330)
T ss_dssp HT--TSCSEEEE--SS----HHHHHHHHHHCC-CCSEEEEE-TSSSEEEEESCCCCTTTTTTTCCCCHHH
T ss_pred cc--ccCCEEEE--cc----cccccHhHhhcccCcceEEec-CCCEEEecCCCCccccccCCCCCChHHH
Confidence 44 688 6665 34 255444444445555666521 11 3456899999999999999999754
No 33
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=84.23 E-value=0.26 Score=42.25 Aligned_cols=24 Identities=25% Similarity=0.141 Sum_probs=20.7
Q ss_pred EEEecCCCCcccccccc-cCCcccc
Q psy12309 125 IESEAAHGTVTRHYRFL-GINDINT 148 (152)
Q Consensus 125 a~fEp~HGsApdiagk~-~anp~~~ 148 (152)
.---|.||||-|||||+ +|||..+
T Consensus 329 IRTSvDHGTAfDIAGkG~~Ad~~Sl 353 (367)
T 3tsn_A 329 IRVSVDHGTAFDKAYKNAKINTKSY 353 (367)
T ss_dssp CEEECCCCSCTTSCSSCCCCCCHHH
T ss_pred eeecCCCCcchhhcCCCCcCChHHH
Confidence 34579999999999999 9999764
No 34
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=76.57 E-value=13 Score=34.01 Aligned_cols=121 Identities=12% Similarity=0.140 Sum_probs=72.8
Q ss_pred chHHHHHHHHHHHHHHHhCCCC-EEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeee-eHHHHHHHH--Hh
Q psy12309 7 PESTFWIFGKPTYNVALQKKWP-LYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHR-LIDDMVAQA--LK 82 (152)
Q Consensus 7 t~~~~eRiar~AF~~A~~r~~~-Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~-~iD~~~~~l--v~ 82 (152)
-+.-++.+++.|.+.|+..+.+ |.-.|+. +.-| ++..+.| +.|=....-.|+.++-+ .++++-.-| ++
T Consensus 458 KDapI~DWVkLAV~Rar~sg~pavFWLD~~---RaHD---a~lI~kV--~~yL~~hdt~GLdi~Im~p~~A~~~slerir 529 (738)
T 2b0t_A 458 KDAPIQDWVKLAVTRSRLSGMPAVFWLDPE---RAHD---RNLASLV--EKYLADHDTEGLDIQILSPVEATQLSIDRIR 529 (738)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCEEEECCTT---CHHH---HHHHHHH--HHHHTTSCCTTCCEEEECHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHhcCCCeEEeeCCC---CccH---HHHHHHH--HHHHHhcCCCCCceEeeCHHHHHHHHHHHHH
Confidence 3556889999999999998887 4444432 2223 3444444 22222222236666655 345543333 34
Q ss_pred CCCCeEEEecCCchhhhhhhhhhh-cCCCc----cccccccCCCCCeEEEec-CCCCccccccc
Q psy12309 83 GNGGFVWACKNYDGDVQSDIVAQG-YGSLG----LMTSILMCPDGKTIESEA-AHGTVTRHYRF 140 (152)
Q Consensus 83 ~P~~fViv~~Nl~GDIlSDlaa~l-~GglG----l~psanig~~~~~a~fEp-~HGsApdiagk 140 (152)
+-..-+=|+-|..=|+|+||.--| .|--. +.|=-| | -++||. +-||||+|.-|
T Consensus 530 ~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~----G-GGLfETGAGGSAPKHVqQ 588 (738)
T 2b0t_A 530 RGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMA----G-GGLFETGAGGSAPKHVQQ 588 (738)
T ss_dssp TTCCCEEEECHHHHHHHHHHHHHHHHSCSSSCEEEEEBTT----S-CEEEECCSSCCCHHHHHH
T ss_pred cCCCeEEeechhhhhhccccchhhhhccchhHhhhccccc----C-CccccCCCCcCchHHHHH
Confidence 444449999999999999998855 22221 122222 2 279999 45799998654
No 35
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=76.51 E-value=13 Score=34.04 Aligned_cols=121 Identities=13% Similarity=0.159 Sum_probs=72.8
Q ss_pred chHHHHHHHHHHHHHHHhCCCC-EEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeee-eHHHHHHHH--Hh
Q psy12309 7 PESTFWIFGKPTYNVALQKKWP-LYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHR-LIDDMVAQA--LK 82 (152)
Q Consensus 7 t~~~~eRiar~AF~~A~~r~~~-Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~-~iD~~~~~l--v~ 82 (152)
-+.-++.+++.|.+.|+..+.+ |.-.|+. +.-| ++..+.| +.|=....-.|+.++-+ .++++-.-| ++
T Consensus 462 KDapI~DWVkLAV~Rar~sg~pavFWLD~~---RaHD---a~lI~kV--~~yL~~hdt~GLdi~Im~p~~A~~~sleRir 533 (741)
T 1itw_A 462 KDAPIQDWVKLAVNRARATNTPAVFWLDPA---RAHD---AQVIAKV--ERYLKDYDTSGLDIRILSPVEATRFSLARIR 533 (741)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECCTT---SHHH---HHHHHHH--HHHHTTSCCTTCCEEEECHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHhcCCCeEEeeCCC---CccH---HHHHHHH--HHHHHhcCCCCCceEeeCHHHHHHHHHHHHH
Confidence 3556889999999999998887 4444432 2223 3444444 22222222236666655 345543333 34
Q ss_pred CCCCeEEEecCCchhhhhhhhhhh-cCCCc----cccccccCCCCCeEEEec-CCCCccccccc
Q psy12309 83 GNGGFVWACKNYDGDVQSDIVAQG-YGSLG----LMTSILMCPDGKTIESEA-AHGTVTRHYRF 140 (152)
Q Consensus 83 ~P~~fViv~~Nl~GDIlSDlaa~l-~GglG----l~psanig~~~~~a~fEp-~HGsApdiagk 140 (152)
+-..-+=|+-|..=|+|+||.--| .|--. +.|=-| | -++||. +-||||+|.-|
T Consensus 534 ~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~----G-GGLfETGAGGSAPKHVqQ 592 (741)
T 1itw_A 534 EGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMS----G-GGLFETGAGGSAPKHVQQ 592 (741)
T ss_dssp TTCCCEEEECHHHHHHHHHHHHHHHHSCSSSSEEEEEBTT----S-CEEEESCSSCCCHHHHHH
T ss_pred cCCCeEEeechhhhhhccccchhhhhccchhHhhhccccc----C-CccccCCCCcCchHHHHH
Confidence 444449999999999999998855 22221 122222 2 279999 45799998654
No 36
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=57.39 E-value=21 Score=25.01 Aligned_cols=26 Identities=12% Similarity=-0.013 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|+..+.+|+++|
T Consensus 35 s~~s~~al~~A~~la~~~~a~l~llh 60 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARLRGVPVYVVH 60 (155)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 45689999999999998877877776
No 37
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=49.34 E-value=13 Score=25.18 Aligned_cols=26 Identities=12% Similarity=-0.115 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|++.+.+|+++|
T Consensus 15 s~~s~~al~~A~~la~~~~a~l~ll~ 40 (146)
T 3s3t_A 15 SDAAQAAFTEAVNIAQRHQANLTALY 40 (146)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 35688999999999998777766665
No 38
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=48.18 E-value=14 Score=24.95 Aligned_cols=26 Identities=8% Similarity=-0.130 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|++.+.+|+++|
T Consensus 12 s~~s~~al~~A~~la~~~~a~l~ll~ 37 (147)
T 3hgm_A 12 SKGAVKALEKGVGLQQLTGAELYILC 37 (147)
T ss_dssp BHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 35688999999999998887877776
No 39
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=46.92 E-value=18 Score=24.91 Aligned_cols=26 Identities=12% Similarity=-0.040 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|+..+.+|+++|
T Consensus 27 s~~s~~al~~a~~la~~~~a~l~ll~ 52 (156)
T 3fg9_A 27 NTSSERAFRYATTLAHDYDVPLGICS 52 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 46789999999999998877777766
No 40
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=44.19 E-value=14 Score=25.25 Aligned_cols=25 Identities=24% Similarity=-0.088 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 9 STFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 9 ~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
+.+++.+++|.++|++.+.+|+++|
T Consensus 17 ~~s~~al~~a~~la~~~~a~l~ll~ 41 (150)
T 3tnj_A 17 SEDSQVVQKVRNLASQIGARLSLIH 41 (150)
T ss_dssp TTHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 4588999999999998777777665
No 41
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=43.58 E-value=18 Score=24.32 Aligned_cols=26 Identities=8% Similarity=-0.178 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|++.+.+|+++|
T Consensus 12 s~~s~~al~~a~~la~~~~a~l~ll~ 37 (137)
T 2z08_A 12 SEHARRAAEVAKAEAEAHGARLIVVH 37 (137)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 35678999999999998777777766
No 42
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=41.10 E-value=62 Score=26.40 Aligned_cols=94 Identities=9% Similarity=0.012 Sum_probs=57.8
Q ss_pred cchHHHHHHHHHHHHHHHh-CCC--CEEEEe---CCCcccccchHHHHHHHHHHHhhcccccccCCeEEe-eeeHHHHHH
Q psy12309 6 RPESTFWIFGKPTYNVALQ-KKW--PLYLST---KNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVA 78 (152)
Q Consensus 6 ~t~~~~eRiar~AF~~A~~-r~~--~Vt~v~---KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~ 78 (152)
.|.+...+|++.+-+++++ -|. +|-+.. +.+.-......-++..+.. ++++| ++.++ +.-.|++.-
T Consensus 178 pt~e~l~~ia~~~~~~~~~~~Gi~PrVAlLs~ge~g~~~~~~~~~v~~A~~ll-~~~~~------~~~v~Gpl~~D~a~~ 250 (333)
T 2af4_C 178 PSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLA-QELAP------DIAIDGELQVDAAIV 250 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHH-HHHCT------TSEEEEEECHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCCcHHHHHHHHHH-hccCC------CcEEEecCcHHHhcC
Confidence 3567788888888999987 443 455544 2221101112455666544 46778 88776 566787664
Q ss_pred HHHh------CC--CCe-EEEecCCc-hhhhhhhhhhh
Q psy12309 79 QALK------GN--GGF-VWACKNYD-GDVQSDIVAQG 106 (152)
Q Consensus 79 ~lv~------~P--~~f-Viv~~Nl~-GDIlSDlaa~l 106 (152)
.-+. +| +.+ |+||||+| |+|.-=+..-+
T Consensus 251 ~~~~~~k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~~ 288 (333)
T 2af4_C 251 PKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRL 288 (333)
T ss_dssp HHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCccCCcCCEEEECCchHHHHHHHHHHHc
Confidence 4444 33 567 99999998 67765554433
No 43
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=40.61 E-value=17 Score=24.47 Aligned_cols=25 Identities=16% Similarity=0.016 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 9 STFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 9 ~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
+.+++.+++|.++|+..+.+|+++|
T Consensus 13 ~~s~~al~~a~~la~~~~a~l~ll~ 37 (141)
T 1jmv_A 13 EESPILLKKAVGIAKRHDAKLSIIH 37 (141)
T ss_dssp TTHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hhhHHHHHHHHHHHHhcCCEEEEEE
Confidence 4578899999999998777777665
No 44
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=40.39 E-value=21 Score=23.90 Aligned_cols=27 Identities=7% Similarity=-0.108 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHH-HhCCCCEEEEeC
Q psy12309 8 ESTFWIFGKPTYNVA-LQKKWPLYLSTK 34 (152)
Q Consensus 8 ~~~~eRiar~AF~~A-~~r~~~Vt~v~K 34 (152)
.+.+++.+++|.++| ++.+.+|+++|=
T Consensus 11 s~~s~~al~~a~~la~~~~~a~l~ll~v 38 (138)
T 3idf_A 11 TEACERAAQYILDMFGKDADCTLTLIHV 38 (138)
T ss_dssp SHHHHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 356889999999999 777767777763
No 45
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=38.25 E-value=19 Score=25.21 Aligned_cols=26 Identities=4% Similarity=-0.244 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|++.+.+|+++|
T Consensus 15 s~~s~~al~~A~~la~~~~a~l~ll~ 40 (170)
T 2dum_A 15 SEGAYRAVEVFEKRNKMEVGEVILLH 40 (170)
T ss_dssp SHHHHHHHHHHHHHCCSCCSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 35678899999999988777777665
No 46
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=37.17 E-value=16 Score=25.27 Aligned_cols=26 Identities=19% Similarity=-0.115 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|+..+.+|+++|
T Consensus 15 s~~s~~al~~a~~la~~~~a~l~ll~ 40 (162)
T 1mjh_A 15 SETAEIALKHVKAFKTLKAEEVILLH 40 (162)
T ss_dssp CHHHHHHHHHHHHTCCSSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 35578899999999987777766665
No 47
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=36.56 E-value=1.1e+02 Score=22.75 Aligned_cols=72 Identities=11% Similarity=-0.046 Sum_probs=36.3
Q ss_pred HHHHHHHHHHh--CCC-CEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeE-Eeeee-------HH---HHHHH
Q psy12309 14 FGKPTYNVALQ--KKW-PLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIW-YEHRL-------ID---DMVAQ 79 (152)
Q Consensus 14 iar~AF~~A~~--r~~-~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~-~~~~~-------iD---~~~~~ 79 (152)
..+.+.++..+ +|. +|.++.-..-.. +.....+-+.+.. +++| +++ ++..+ .+ ..+.+
T Consensus 110 ~g~~~~~~l~~~~~g~~~i~~i~~~~~~~-~~~~R~~gf~~~l-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (291)
T 3l49_A 110 IGAELALQMVADLGGKGNVLVFNGFYSVP-VCKIRYDQMKYVL-EAFP------DVKIIEPELRDVIPNTIQSAYSNVTD 181 (291)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCTTSH-HHHHHHHHHHHHH-HTCT------TEEECSSCBCCCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCceEEEEeCCCCCc-hHHHHHHHHHHHH-HHCC------CCEEEeeeccCCCCCCHHHHHHHHHH
Confidence 44555555555 554 666664221111 2233455566665 5677 665 23221 11 23455
Q ss_pred HHhCCC---Ce-EEEecC
Q psy12309 80 ALKGNG---GF-VWACKN 93 (152)
Q Consensus 80 lv~~P~---~f-Viv~~N 93 (152)
+++... .. .|+|.|
T Consensus 182 ~l~~~~~~~~~~ai~~~~ 199 (291)
T 3l49_A 182 MLTKYPNEGDVGAIWACW 199 (291)
T ss_dssp HHHHCCSTTSCCEEEESS
T ss_pred HHHhCCCcCCcCEEEECC
Confidence 555444 77 788876
No 48
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=34.13 E-value=19 Score=24.20 Aligned_cols=25 Identities=12% Similarity=-0.215 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 9 STFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 9 ~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
+.+++.+++|.++|++.+.+|+++|
T Consensus 15 ~~s~~al~~a~~la~~~~a~l~ll~ 39 (138)
T 1q77_A 15 SDCEKAITYAVNFSEKLGAELDILA 39 (138)
T ss_dssp CCCHHHHHHHHHHHTTTCCEEEEEE
T ss_pred HhHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3467899999999988777888887
No 49
>3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E*
Probab=32.68 E-value=26 Score=26.54 Aligned_cols=26 Identities=12% Similarity=-0.128 Sum_probs=22.1
Q ss_pred EEEecCCCCcccccccccCCcccccc
Q psy12309 125 IESEAAHGTVTRHYRFLGINDINTNV 150 (152)
Q Consensus 125 a~fEp~HGsApdiagk~~anp~~~~~ 150 (152)
.++.|.|||.-|+.|+-+.+|--.|+
T Consensus 145 ~~~CPcHGs~FD~~G~v~~gPa~~~L 170 (185)
T 3cx5_E 145 GWFCPCHGSHYDISGRIRKGPAPLNL 170 (185)
T ss_dssp EEEETTTTEEECTTCCEEESSCCSCC
T ss_pred EEEcCCCCCEECCCCCEecCCCCCCc
Confidence 69999999999999998888855444
No 50
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=31.09 E-value=2.1e+02 Score=23.12 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=58.3
Q ss_pred cchHHHHHHHHHHHHHHHhCCC--CEEEEeCCC-cc-c-ccchHHHHHHHHHHHhhcccccccCCeEEe-eeeHHHHHHH
Q psy12309 6 RPESTFWIFGKPTYNVALQKKW--PLYLSTKNT-IL-K-KYDGHFKDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVAQ 79 (152)
Q Consensus 6 ~t~~~~eRiar~AF~~A~~r~~--~Vt~v~KaN-vl-~-~~dglf~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~~ 79 (152)
.|.+...+|++.+-+++++-|. +|-+..=++ .. . .....-++..+.. ++++| ++.++ ..-.|++...
T Consensus 179 pt~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~ge~G~~~~~~~~~i~~A~~ll-~~~~~------~~~v~Gpl~~D~a~~~ 251 (329)
T 1td9_A 179 PDSQDLAEIAIESANTAKMFDIEPRVAMLSFSTKGSAKSDETEKVADAVKIA-KEKAP------ELTLDGEFQFDAAFVP 251 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCCCEEEECSSSTTSSCSHHHHHHHHHHHHH-HHHCT------TSCEEEEECHHHHHCH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCchHHHHHHHHHH-HhhCC------CCEEEeCCcHHHHcCH
Confidence 4677788889999999987543 566654211 11 1 1111455666544 46777 77776 5667877655
Q ss_pred HHh------CC--CCe-EEEecCCc-hhhhhhhhhhh
Q psy12309 80 ALK------GN--GGF-VWACKNYD-GDVQSDIVAQG 106 (152)
Q Consensus 80 lv~------~P--~~f-Viv~~Nl~-GDIlSDlaa~l 106 (152)
-+. +| +++ |+||||+| |+|.-=+..-+
T Consensus 252 ~~~~~k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~~ 288 (329)
T 1td9_A 252 SVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRL 288 (329)
T ss_dssp HHHHHHCTTSSCSSCCSEEECSSHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCCccCCCCCEEEECChhHHHHHHHHHHHh
Confidence 543 33 567 99999988 67766554444
No 51
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=30.24 E-value=1.1e+02 Score=25.18 Aligned_cols=94 Identities=7% Similarity=0.014 Sum_probs=57.0
Q ss_pred cchHHHHHHHHHHHHHHHhC-CC--CEEEEeCC---CcccccchHHHHHHHHHHHhhcccccccCCeEEe-eeeHHHHHH
Q psy12309 6 RPESTFWIFGKPTYNVALQK-KW--PLYLSTKN---TILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVA 78 (152)
Q Consensus 6 ~t~~~~eRiar~AF~~A~~r-~~--~Vt~v~Ka---Nvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~ 78 (152)
.|.+....|++.+-+++++- |. +|-+..=+ +.-......-++.++.. ++++| ++.++ +.-.|++.-
T Consensus 185 pt~e~l~~ia~~a~~~a~~~~Gi~PrVAlLs~ge~Gs~~~~~~~~i~~A~~ll-k~~~~------~~~v~Gpl~~D~A~~ 257 (355)
T 1vmi_A 185 PTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIV-RERAP------KLVVDGELQFDAAFV 257 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSCCEEEEECSCSTTSSCSHHHHHHHHHHHHH-HHHCT------TSEEEEEECHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCCCCCccHHHHHHHHHHH-hccCC------CCEEEeCCChHHhhC
Confidence 35677788888888888874 53 55555422 21111222345555544 46778 77776 556777664
Q ss_pred HHHh------CC--CCe-EEEecCCc-hhhhhhhhhhh
Q psy12309 79 QALK------GN--GGF-VWACKNYD-GDVQSDIVAQG 106 (152)
Q Consensus 79 ~lv~------~P--~~f-Viv~~Nl~-GDIlSDlaa~l 106 (152)
.-+. +| +.+ |+||||+| |+|.-=+...+
T Consensus 258 ~~~~~~k~~~s~~~G~aDvlV~Pd~d~GNI~~K~l~~~ 295 (355)
T 1vmi_A 258 PEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRL 295 (355)
T ss_dssp HHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCccCCCCCEEEECChhHHhHHHHHHHHc
Confidence 4444 33 567 99999988 77765554433
No 52
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=29.54 E-value=2.2e+02 Score=22.93 Aligned_cols=96 Identities=8% Similarity=-0.005 Sum_probs=59.3
Q ss_pred ccchHHHHHHHHHHHHHHHhCCC--CEEEEeCCCccc-ccch--HHHHHHHHHHHhhcccccccCCeEEe-eeeHHHHHH
Q psy12309 5 SRPESTFWIFGKPTYNVALQKKW--PLYLSTKNTILK-KYDG--HFKDIFQEVYEKNYKSQFEQAKIWYE-HRLIDDMVA 78 (152)
Q Consensus 5 ~~t~~~~eRiar~AF~~A~~r~~--~Vt~v~KaNvl~-~~dg--lf~~v~~eva~~~yp~~f~~~~I~~~-~~~iD~~~~ 78 (152)
..|.+...++++.+-+++++-|. ||-+..=++.-. ...+ .-++..+.. ++++| ++.++ ..-.|++..
T Consensus 182 ~~t~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~~~~G~e~~~~~~~i~~A~~ll-k~~~~------~~~v~Gpl~~D~a~~ 254 (337)
T 1r5j_A 182 DPTAQELAEIAVNTAETAKIFDIDPKIAMLSFSTKGSGKAPQVDKVREATEIA-TGLNP------DLALDGELQFDAAFV 254 (337)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCCEEEECSCSTTSSCSHHHHHHHHHHHHH-HHHCT------TSCEEEEECHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCccCCCCCCCcHHHHHHHHHH-hccCC------CcEEEecCcHHHhcC
Confidence 34677888899999999987543 555543322221 1111 246666544 46778 77776 556787754
Q ss_pred HHHh------CC--CCe-EEEecCCc-hhhhhhhhhhhc
Q psy12309 79 QALK------GN--GGF-VWACKNYD-GDVQSDIVAQGY 107 (152)
Q Consensus 79 ~lv~------~P--~~f-Viv~~Nl~-GDIlSDlaa~l~ 107 (152)
.-+. +| +++ |+||||++ |+|.-=+..-+.
T Consensus 255 ~~~~~~k~~~s~~~G~aDvlv~p~~d~GnI~~K~l~~~~ 293 (337)
T 1r5j_A 255 PETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQRLG 293 (337)
T ss_dssp HHHHHHHSCSCSSTTCCCEEECSSHHHHHHHHHHHHHTT
T ss_pred HHHHHhhCCCCccCCCCCEEEECChHHHHHHHHHHHHhc
Confidence 4443 22 678 99999987 677665554443
No 53
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=27.74 E-value=65 Score=24.81 Aligned_cols=26 Identities=12% Similarity=-0.002 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|+++|...+.+|+++|
T Consensus 181 s~~s~~al~~a~~la~~~~a~l~ll~ 206 (309)
T 3cis_A 181 SSASELATAIAFDEASRRNVDLVALH 206 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ChHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 35678999999999998888888876
No 54
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=27.18 E-value=48 Score=23.29 Aligned_cols=24 Identities=8% Similarity=-0.090 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEE
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLS 32 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v 32 (152)
.+.+++.+++|.++|+ .+.+|+++
T Consensus 27 s~~s~~al~~A~~lA~-~~a~l~ll 50 (163)
T 1tq8_A 27 SDSSMRAVDRAAQIAG-ADAKLIIA 50 (163)
T ss_dssp SHHHHHHHHHHHHHHT-TTSEEEEE
T ss_pred CHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 3568899999999999 77789888
No 55
>2a2l_A Unknown; structural genomics, PSI, protein structure initiat YORK SGX research center for structural genomics, NYSGXRC, function; 2.20A {Klebsiella pneumoniae} SCOP: d.110.9.1
Probab=27.11 E-value=61 Score=23.50 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=30.8
Q ss_pred ccchHHHHHHHHHHHHHHHhCCCC--EEEEe-CCCccc--ccchHH
Q psy12309 5 SRPESTFWIFGKPTYNVALQKKWP--LYLST-KNTILK--KYDGHF 45 (152)
Q Consensus 5 ~~t~~~~eRiar~AF~~A~~r~~~--Vt~v~-KaNvl~--~~dglf 45 (152)
..|.+..++++..|.+.|++++.+ |.++| -.|++- ..||-+
T Consensus 11 ~lt~~~A~~l~~aa~~~A~~~g~~v~IaVvD~~G~ll~~~rmdga~ 56 (145)
T 2a2l_A 11 TITLAAAQQMAAAVEKKATEINVAVVFSVVDRGGNTLLIQRMDEAF 56 (145)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTCCCEEEEEETTSCEEEEEECTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEEEECCCCEEEEEECCCCC
Confidence 468899999999999999999886 77787 455432 235544
No 56
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=25.83 E-value=31 Score=23.05 Aligned_cols=23 Identities=9% Similarity=-0.285 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 11 FWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 11 ~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
+++.+++|.++|+..+.+|+++|
T Consensus 16 s~~al~~a~~la~~~~a~l~ll~ 38 (143)
T 3fdx_A 16 TERIISHVESEARIDDAEVHFLT 38 (143)
T ss_dssp CTTHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCeEEEEE
Confidence 57889999999998777777776
No 57
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=25.80 E-value=46 Score=24.97 Aligned_cols=25 Identities=12% Similarity=-0.160 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 9 STFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 9 ~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
+.+++.+++|.++|++.+.+|+++|
T Consensus 11 ~~s~~al~~A~~lA~~~~a~l~ll~ 35 (268)
T 3ab8_A 11 PQARGAEALAEWLAYKLSAPLTVLF 35 (268)
T ss_dssp GGGHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 4578899999999998888888876
No 58
>1pp9_E Ubiquinol-cytochrome C reductase iron-sulfur SUBU mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: b.33.1.1 f.23.12.1 PDB: 1bgy_E* 1be3_E* 1l0n_E* 1ntk_E* 1ntm_E* 1ntz_E* 1nu1_E* 1l0l_E* 1ppj_E* 1qcr_E* 1sqb_E* 1sqp_E* 1sqq_E* 1sqv_E* 1sqx_E* 2a06_E* 2fyu_E* 2ybb_E* 1bcc_E* 2bcc_E* ...
Probab=25.50 E-value=34 Score=26.18 Aligned_cols=26 Identities=12% Similarity=-0.078 Sum_probs=21.9
Q ss_pred EEEecCCCCcccccccccCCcccccc
Q psy12309 125 IESEAAHGTVTRHYRFLGINDINTNV 150 (152)
Q Consensus 125 a~fEp~HGsApdiagk~~anp~~~~~ 150 (152)
.++.|.||+.-|+.|+-+.+|--.|+
T Consensus 155 ~~~CP~HGs~FD~~G~v~~gPa~~~L 180 (196)
T 1pp9_E 155 GYYCPCHGSHYDASGRIRKGPAPLNL 180 (196)
T ss_dssp SEEETTTTEEECTTCCEEESSCCSCC
T ss_pred EEEeCCCCCEECCCCCCccCCCCCCC
Confidence 59999999999999998888765554
No 59
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=23.84 E-value=2.1e+02 Score=22.75 Aligned_cols=83 Identities=4% Similarity=-0.064 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHH-hCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHH----HHHHhCCC
Q psy12309 11 FWIFGKPTYNVAL-QKKWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMV----AQALKGNG 85 (152)
Q Consensus 11 ~eRiar~AF~~A~-~r~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~----~~lv~~P~ 85 (152)
++++.+.-.+++. ++..++.+++-+. .|.-+++++.++ +..+ +.+++++..-++..- ..-+.+-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~k~~i~~~S~-----~gnT~~la~~i~-~~l~----~~g~~v~~~~~~~~~~~~~~~~l~~~d 309 (404)
T 2ohh_A 240 PMKIIEAYTGWATGMVDERVTVIYDTM-----HGSTRKMAHAIA-EGAM----SEGVDVRVYCLHEDDRSEIVKDILESG 309 (404)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEEECCS-----SSHHHHHHHHHH-HHHH----TTTCEEEEEETTTSCHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhccCCCCcEEEEEECC-----ChHHHHHHHHHH-HHHH----hCCCeEEEEECCCCCHHHHHHHHHHCC
Confidence 6777777777775 3344788877542 356667777765 4333 225555544433221 12333434
Q ss_pred CeEEEecCCchhhhhhhh
Q psy12309 86 GFVWACKNYDGDVQSDIV 103 (152)
Q Consensus 86 ~fViv~~Nl~GDIlSDla 103 (152)
.+|+++|.++|.+-..+-
T Consensus 310 ~iiigsP~y~~~~~~~~k 327 (404)
T 2ohh_A 310 AIALGAPTIYDEPYPSVG 327 (404)
T ss_dssp EEEEECCEETTEECTHHH
T ss_pred EEEEECccccccchHHHH
Confidence 449999999998855543
No 60
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=23.08 E-value=2.5e+02 Score=24.16 Aligned_cols=55 Identities=7% Similarity=-0.097 Sum_probs=32.2
Q ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHhhcccccccCCeEEeeeeHHHHHHHHH--hCCCCe-EEEecCCch
Q psy12309 26 KWPLYLSTKNTILKKYDGHFKDIFQEVYEKNYKSQFEQAKIWYEHRLIDDMVAQAL--KGNGGF-VWACKNYDG 96 (152)
Q Consensus 26 ~~~Vt~v~KaNvl~~~dglf~~v~~eva~~~yp~~f~~~~I~~~~~~iD~~~~~lv--~~P~~f-Viv~~Nl~G 96 (152)
|..||.+|= + .--.++++.-| .+.+ .+.++++..|.- .|. ..+++| ||+|.-++=
T Consensus 88 ga~V~giD~------~-~~~i~~a~~~a-~~~~------~~~~~~~~~~~~--~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 88 GATIVGIDF------Q-QENINVCRALA-EENP------DFAAEFRVGRIE--EVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp TCEEEEEES------C-HHHHHHHHHHH-HTST------TSEEEEEECCHH--HHHHHCCTTSCSEEEEESCHH
T ss_pred CCEEEEECC------C-HHHHHHHHHHH-HhcC------CCceEEEECCHH--HHhhhccCCCccEEEECcchh
Confidence 456777772 1 23445666655 4434 455666655543 332 357899 998887774
No 61
>1vf5_D Rieske iron-sulfur protein; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: b.33.1.1 f.23.12.1 PDB: 2d2c_D* 2e74_D* 2e75_D* 2e76_D* 2zt9_D*
Probab=22.16 E-value=66 Score=23.85 Aligned_cols=55 Identities=4% Similarity=-0.122 Sum_probs=35.2
Q ss_pred EEEecCCchhh----hhhhhhhhcCCCccccccccCCCCCeEEEecCCCCcccccccccCCccccc
Q psy12309 88 VWACKNYDGDV----QSDIVAQGYGSLGLMTSILMCPDGKTIESEAAHGTVTRHYRFLGINDINTN 149 (152)
Q Consensus 88 Viv~~Nl~GDI----lSDlaa~l~GglGl~psanig~~~~~a~fEp~HGsApdiagk~~anp~~~~ 149 (152)
+++.-+..|.+ +++.|..+-..+. .+-+ + ..++-|.|||.-|..|+-+.+|-..+
T Consensus 89 ~~lv~~~~g~~~~~a~~~~CtH~G~~l~----~~~~--~-~~~~CP~Hgs~Fd~~G~~~~gPa~~~ 147 (179)
T 1vf5_D 89 TYIVVESKEAIRDYGINAVCTHLGCVVP----WNAA--E-NKFKCPCHGSQYDETGRVIRGPAPLS 147 (179)
T ss_dssp EECCBCTTCCBCSCCCBCBCTTTSCBCC----BCSS--S-SSEECTTTCCEECSSSCCCSSSCCSC
T ss_pred EEEEEECCCcEEEEEEeCccCCCCCCCc----ccCC--C-CEEECCCCCCEECCCCcEecCCCCCC
Confidence 44444556664 4667766544332 2222 2 25999999999999999888875433
No 62
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=21.32 E-value=81 Score=23.53 Aligned_cols=26 Identities=4% Similarity=-0.215 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|+++|...+.+|+++|
T Consensus 164 s~~~~~al~~a~~la~~~~a~l~ll~ 189 (268)
T 3ab8_A 164 SESAVRALHALAPLARALGLGVRVVS 189 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHhhhcCCCEEEEEE
Confidence 35678899999999998777888877
No 63
>3fpw_A HBPS, extracellular HAEM-binding protein; heme binding protein; 1.60A {Streptomyces reticuli} PDB: 3fpv_A
Probab=21.06 E-value=1.2e+02 Score=23.36 Aligned_cols=34 Identities=3% Similarity=-0.088 Sum_probs=28.2
Q ss_pred cccchHHHHHHHHHHHHHHHhCCCC--EEEEeC-CCc
Q psy12309 4 DSRPESTFWIFGKPTYNVALQKKWP--LYLSTK-NTI 37 (152)
Q Consensus 4 ~~~t~~~~eRiar~AF~~A~~r~~~--Vt~v~K-aNv 37 (152)
...|.+..++++..|.+.|++++.+ |.++|. .|+
T Consensus 63 ~~ltl~~A~~l~~aA~~~A~~~g~pV~IaVvD~~G~l 99 (192)
T 3fpw_A 63 THLTLEAATKAARAAVEAAEKDGRHVSVAVVDRNGNT 99 (192)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTSCE
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeCCCCE
Confidence 4678899999999999999999986 777874 443
No 64
>2nwf_A Ubiquinol-cytochrome C reductase iron-sulfur SUBU; rieske [2Fe-2S] ISP, oxidoreductase; HET: GOL; 1.10A {Rhodobacter sphaeroides} PDB: 2nuk_A 2nve_A 2num_A 2nvg_A 2nvf_A
Probab=20.96 E-value=59 Score=23.43 Aligned_cols=25 Identities=12% Similarity=-0.139 Sum_probs=20.9
Q ss_pred EEEecCCCCcccccccccCCccccc
Q psy12309 125 IESEAAHGTVTRHYRFLGINDINTN 149 (152)
Q Consensus 125 a~fEp~HGsApdiagk~~anp~~~~ 149 (152)
.++.|.|||.-|+.|+-+.+|-..+
T Consensus 100 ~~~CP~Hgs~Fd~~G~~~~gPa~~~ 124 (141)
T 2nwf_A 100 GWFCPCHGSHWDSAGRIRKGPAPEN 124 (141)
T ss_dssp EEEETTTTEEECTTSCEEESSCCSC
T ss_pred EEEcCCCCCEECCCCCCccCCCCCC
Confidence 6999999999999999887775444
No 65
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=20.49 E-value=83 Score=24.19 Aligned_cols=26 Identities=19% Similarity=0.024 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEe
Q psy12309 8 ESTFWIFGKPTYNVALQKKWPLYLST 33 (152)
Q Consensus 8 ~~~~eRiar~AF~~A~~r~~~Vt~v~ 33 (152)
.+.+++.+++|.++|++.+.+|+++|
T Consensus 29 s~~s~~al~~A~~lA~~~~a~l~ll~ 54 (309)
T 3cis_A 29 SPAAQVAVRWAARDAELRKIPLTLVH 54 (309)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 34678899999999998887888776
Done!