Query psy1231
Match_columns 151
No_of_seqs 244 out of 1229
Neff 5.9
Searched_HMMs 13730
Date Fri Aug 16 15:47:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1231.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1231hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kmma2 d.104.1.1 (A:4-325) Hi 99.5 4.5E-16 3.3E-20 126.1 2.3 82 65-146 2-94 (322)
2 d1wu7a2 d.104.1.1 (A:3-329) Hi 99.5 7.7E-16 5.6E-20 125.3 3.3 83 62-144 1-91 (327)
3 d1qe0a2 d.104.1.1 (A:1-325) Hi 99.5 2.1E-15 1.5E-19 122.3 2.4 81 64-144 1-92 (325)
4 d1h4vb2 d.104.1.1 (B:2-325) Hi 99.5 1E-14 7.5E-19 118.4 3.6 79 65-143 2-91 (324)
5 d1z7ma1 d.104.1.1 (A:6-323) AT 99.4 3.6E-14 2.6E-18 114.6 2.9 86 65-150 1-97 (318)
6 d1r6ta1 a.16.1.3 (A:7-60) N-te 99.3 1.3E-12 9.8E-17 82.1 5.5 46 5-50 1-46 (54)
7 d1fyja_ a.16.1.3 (A:) Multifun 99.2 5.4E-12 3.9E-16 80.1 5.6 45 6-50 1-45 (57)
8 d1d2da_ a.16.1.3 (A:) Multifun 99.2 5.7E-12 4.1E-16 79.6 4.3 41 10-50 2-42 (56)
9 d1nj8a3 d.104.1.1 (A:0-267) Pr 97.8 1.3E-05 9.2E-10 63.0 5.2 51 67-117 23-73 (268)
10 d1usya_ d.104.1.1 (A:) ATP pho 97.7 1.1E-06 7.8E-11 69.3 -1.4 64 82-149 6-70 (275)
11 d1b76a2 d.104.1.1 (A:1-394) Gl 97.5 2.6E-05 1.9E-09 63.1 3.2 52 64-115 24-77 (331)
12 d1hc7a2 d.104.1.1 (A:5-276) Pr 97.2 8.9E-05 6.5E-09 56.8 3.7 51 65-115 26-76 (272)
13 d1atia2 d.104.1.1 (A:1-394) Gl 96.6 0.00046 3.3E-08 57.4 2.9 54 64-118 24-79 (394)
14 d1nj1a3 d.104.1.1 (A:19-283) P 95.7 0.0031 2.3E-07 48.3 3.5 48 67-115 21-68 (265)
15 d1qf6a4 d.104.1.1 (A:242-532) 95.6 0.0045 3.3E-07 48.8 4.1 49 67-115 18-66 (291)
16 d1nyra4 d.104.1.1 (A:242-532) 94.9 0.0066 4.8E-07 47.8 2.8 48 68-115 19-66 (291)
17 d1b8aa2 d.104.1.1 (A:104-438) 92.7 0.038 2.8E-06 43.4 3.5 33 77-109 32-64 (335)
18 d1eova2 d.104.1.1 (A:205-557) 91.1 0.073 5.3E-06 42.1 3.5 31 78-108 43-73 (353)
19 d1n9wa2 d.104.1.1 (A:111-414) 90.7 0.083 6E-06 40.8 3.5 31 78-108 14-44 (304)
20 d1c0aa3 d.104.1.1 (A:107-287,A 90.6 0.088 6.4E-06 41.7 3.7 31 78-108 31-61 (346)
21 d1l0wa3 d.104.1.1 (A:105-294,A 89.7 0.12 8.4E-06 41.2 3.7 32 77-108 38-69 (356)
22 d1e1oa2 d.104.1.1 (A:161-502) 89.2 0.12 8.6E-06 40.6 3.3 30 78-107 22-51 (342)
23 d1nnha_ d.104.1.1 (A:) Hypothe 88.6 0.15 1.1E-05 39.6 3.5 31 78-108 13-43 (293)
24 d1g5ha2 d.104.1.1 (A:41-330) T 66.9 1.5 0.00011 33.6 2.6 51 64-115 22-73 (290)
25 d1pb6a1 a.4.1.9 (A:14-85) Hypo 48.2 7.9 0.00058 22.7 3.2 26 79-104 3-28 (72)
26 d1seta2 d.104.1.1 (A:111-421) 47.8 8.1 0.00059 29.7 4.0 47 71-118 48-94 (311)
27 d1jjca_ d.104.1.1 (A:) Phenyl- 45.4 5.6 0.00041 30.2 2.6 29 81-109 18-46 (266)
28 d1t56a1 a.4.1.9 (A:22-94) Ethr 42.7 9.7 0.00071 22.1 2.9 24 80-103 3-26 (73)
29 d2fbqa1 a.4.1.9 (A:2-80) Trans 40.1 13 0.00094 21.9 3.3 25 79-103 3-27 (79)
30 d2id3a1 a.4.1.9 (A:13-80) Puta 39.9 15 0.0011 21.2 3.4 28 77-104 3-30 (68)
31 d3c07a1 a.4.1.9 (A:15-89) Puta 38.9 13 0.00097 21.5 3.2 24 80-103 5-28 (75)
32 d2iu5a1 a.4.1.9 (A:1-71) Trans 38.2 11 0.0008 21.9 2.7 27 78-104 4-30 (71)
33 d2fd5a1 a.4.1.9 (A:1-76) Proba 38.0 14 0.001 21.5 3.2 26 78-103 5-30 (76)
34 d2o7ta1 a.4.1.9 (A:1-78) Trans 37.5 16 0.0012 21.6 3.4 26 78-103 5-30 (78)
35 d1sgma1 a.4.1.9 (A:5-77) Putat 36.3 14 0.00098 21.5 2.9 24 81-104 3-26 (73)
36 d1jt6a1 a.4.1.9 (A:2-72) Multi 35.9 14 0.001 21.4 2.9 24 81-104 2-25 (71)
37 d2d6ya1 a.4.1.9 (A:7-74) Putat 34.9 15 0.0011 21.2 2.9 23 81-103 3-25 (68)
38 d2i10a1 a.4.1.9 (A:10-78) Puta 34.2 8.6 0.00063 22.3 1.6 23 82-104 2-24 (69)
39 d1vi0a1 a.4.1.9 (A:6-77) Hypot 34.0 14 0.001 21.3 2.6 23 81-103 2-24 (72)
40 d2gena1 a.4.1.9 (A:6-75) Proba 33.9 14 0.0011 21.1 2.7 23 82-104 2-24 (70)
41 d1v7ba1 a.4.1.9 (A:1-74) Trans 33.5 17 0.0012 21.1 3.0 24 81-104 5-28 (74)
42 d2np5a1 a.4.1.9 (A:9-77) Trans 32.9 14 0.001 21.2 2.4 24 81-104 2-25 (69)
43 d1rkta1 a.4.1.9 (A:2-82) Hypot 31.4 19 0.0014 21.2 3.0 24 80-103 11-34 (81)
44 d2gfna1 a.4.1.9 (A:4-80) Proba 31.3 17 0.0013 21.2 2.8 24 80-103 6-29 (77)
45 d2fx0a1 a.4.1.9 (A:4-76) Hemol 30.9 18 0.0013 21.2 2.8 25 80-104 4-28 (73)
46 d2hyja1 a.4.1.9 (A:8-82) Putat 29.9 21 0.0015 20.8 3.0 26 79-104 4-29 (75)
47 d2g3ba1 a.4.1.9 (A:2-73) Putat 29.8 9.8 0.00071 22.2 1.3 25 80-104 2-26 (72)
48 d1ui5a1 a.4.1.9 (A:5-75) A-fac 28.7 21 0.0016 20.5 2.9 24 80-103 5-28 (71)
49 d2fq4a1 a.4.1.9 (A:9-77) Trans 27.9 27 0.0019 20.0 3.2 26 79-104 3-28 (69)
50 d2g7sa1 a.4.1.9 (A:3-76) Putat 27.1 23 0.0017 20.5 2.8 25 80-104 4-28 (74)
51 d1wd7a_ c.113.1.1 (A:) Probabl 26.2 16 0.0011 26.2 2.2 23 87-109 13-35 (254)
52 d2oi8a1 a.4.1.9 (A:8-86) Putat 24.3 30 0.0022 20.1 3.0 24 79-102 8-31 (79)
53 d1zk8a1 a.4.1.9 (A:6-77) Trans 22.9 26 0.0019 20.1 2.4 23 82-104 5-27 (72)
54 d2id6a1 a.4.1.9 (A:1-75) Trans 21.2 9.7 0.0007 22.4 0.0 24 80-103 3-26 (75)
55 d1t33a1 a.4.1.9 (A:1-88) Putat 20.8 35 0.0025 20.3 2.8 22 78-99 10-31 (88)
56 d2g7la1 a.4.1.9 (A:16-83) Puta 20.0 36 0.0027 19.3 2.7 24 81-104 5-28 (68)
No 1
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
Probab=99.55 E-value=4.5e-16 Score=126.13 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=71.6
Q ss_pred ccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCCccc----cc-------chhhhhhHHh
Q psy1231 65 LKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGVYWT----GY-------STAVGFLMIH 133 (151)
Q Consensus 65 ~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge~~~----~~-------~~~~~~~~~~ 133 (151)
+++|+||||++|+++..+++|++.+.++|++|||.+|+||+||++|+|..++|+... .. ...+++|.++
T Consensus 2 ~~~~~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~~~~~~d~~g~~l~Lr~D~ 81 (322)
T d1kmma2 2 IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEG 81 (322)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCTTSHHHHHTCEEEECTTSCEEEECSCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeEeECcccccHHHhhcccCcchhhhHHHHhhhhhcccccccccccc
Confidence 689999999999999999999999999999999999999999999999988877421 11 4678889999
Q ss_pred hCCCcchhhhhcc
Q psy1231 134 SVPSAPLWINWTN 146 (151)
Q Consensus 134 ~~~~~~~~~~~~~ 146 (151)
+.|.+|..++...
T Consensus 82 T~~iaR~~~~~~~ 94 (322)
T d1kmma2 82 TAGCVRAGIEHGL 94 (322)
T ss_dssp HHHHHHHHHHTTC
T ss_pred cchhhHHHHhhhh
Confidence 9999998886543
No 2
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.54 E-value=7.7e-16 Score=125.32 Aligned_cols=83 Identities=16% Similarity=0.204 Sum_probs=73.9
Q ss_pred cccccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCCccccc--------chhhhhhHHh
Q psy1231 62 KFILKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGVYWTGY--------STAVGFLMIH 133 (151)
Q Consensus 62 ~~~~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge~~~~~--------~~~~~~~~~~ 133 (151)
+|.+++|+||+|++|+++..+++|++.+.++|++|||.+|+||+||++|+|..+.|+++... .+.+++|.+.
T Consensus 1 ~~~~~~~~G~~D~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~f~D~~g~~l~LRpD~ 80 (327)
T d1wu7a2 1 RLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEA 80 (327)
T ss_dssp CCCCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCS
T ss_pred CCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCeEeECCccchHhhccccCchhHHHHHhhhhcccchhhcccccc
Confidence 46789999999999999999999999999999999999999999999999999888876553 5667788888
Q ss_pred hCCCcchhhhh
Q psy1231 134 SVPSAPLWINW 144 (151)
Q Consensus 134 ~~~~~~~~~~~ 144 (151)
+.|.+++.++.
T Consensus 81 T~~iar~~~~~ 91 (327)
T d1wu7a2 81 TPSTVRMVTSR 91 (327)
T ss_dssp HHHHHHHHTTC
T ss_pred cchhhhHhhhh
Confidence 88888877654
No 3
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=99.50 E-value=2.1e-15 Score=122.28 Aligned_cols=81 Identities=17% Similarity=0.259 Sum_probs=63.1
Q ss_pred cccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCCcc---ccc--------chhhhhhHH
Q psy1231 64 ILKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGVYW---TGY--------STAVGFLMI 132 (151)
Q Consensus 64 ~~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge~~---~~~--------~~~~~~~~~ 132 (151)
++++|+||||++|+++..+++|++++.++|++|||.+|+||+||++|+|..++|++. .+. ...++++.+
T Consensus 1 ~~~lP~G~rD~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~~~~~~lr~d 80 (325)
T d1qe0a2 1 MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPE 80 (325)
T ss_dssp CCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSC
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCcccccHHHhccccCCchhHHHHHHhhhhcccccccccccc
Confidence 478999999999999999999999999999999999999999999999999888752 111 345666777
Q ss_pred hhCCCcchhhhh
Q psy1231 133 HSVPSAPLWINW 144 (151)
Q Consensus 133 ~~~~~~~~~~~~ 144 (151)
.+.|.++..+..
T Consensus 81 ~t~~~~r~~~~~ 92 (325)
T d1qe0a2 81 GTAAVVRSYIEH 92 (325)
T ss_dssp SHHHHHHHHHHT
T ss_pred ccccHHHHHHhh
Confidence 777777766543
No 4
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
Probab=99.46 E-value=1e-14 Score=118.42 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=67.6
Q ss_pred ccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCCcc---ccc--------chhhhhhHHh
Q psy1231 65 LKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGVYW---TGY--------STAVGFLMIH 133 (151)
Q Consensus 65 ~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge~~---~~~--------~~~~~~~~~~ 133 (151)
.+.++||||++|+++..+++|++.+.++|++|||.+|+||+||++|+|..++|++. ... ...+++|.+.
T Consensus 2 ~~~~kG~rD~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~ 81 (324)
T d1h4vb2 2 ARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEG 81 (324)
T ss_dssp CCCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCC------CCSCEEECTTSCEEEECCCS
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCCccccHHHhhcccCCchhHHHHHHhhhhccCCccccccccc
Confidence 46789999999999999999999999999999999999999999999999888752 121 5677888888
Q ss_pred hCCCcchhhh
Q psy1231 134 SVPSAPLWIN 143 (151)
Q Consensus 134 ~~~~~~~~~~ 143 (151)
+.|.++..+.
T Consensus 82 T~~iar~~~~ 91 (324)
T d1h4vb2 82 TAAMVRAYLE 91 (324)
T ss_dssp HHHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 8888887663
No 5
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]}
Probab=99.40 E-value=3.6e-14 Score=114.57 Aligned_cols=86 Identities=13% Similarity=0.206 Sum_probs=72.3
Q ss_pred ccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhccc--CCcccc--------c-chhhhhhHHh
Q psy1231 65 LKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKY--GVYWTG--------Y-STAVGFLMIH 133 (151)
Q Consensus 65 ~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~--Ge~~~~--------~-~~~~~~~~~~ 133 (151)
+-+|+|++|++|.++..+++|++.++++|++|||.+|+||+||+.|+|.... |+++.. . .+.+++|.|+
T Consensus 1 ~~lP~g~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~ 80 (318)
T d1z7ma1 1 YLLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDF 80 (318)
T ss_dssp CCCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCS
T ss_pred CCCCCchhhhCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHhhccCCCcccccccceeEeecCCccEEEeeccc
Confidence 3579999999999999999999999999999999999999999999997643 333211 1 5788999999
Q ss_pred hCCCcchhhhhccccCC
Q psy1231 134 SVPSAPLWINWTNHLGK 150 (151)
Q Consensus 134 ~~~~~~~~~~~~~~~~~ 150 (151)
++|.+|+.+++....++
T Consensus 81 T~~iaR~~~~~~~~~~~ 97 (318)
T d1z7ma1 81 TLPLVRLYSQIKDSTSA 97 (318)
T ss_dssp HHHHHHHHHTCCSCCCE
T ss_pred cchHHHHHHHhcccCCc
Confidence 99999999876655543
No 6
>d1r6ta1 a.16.1.3 (A:7-60) N-terminal domain of eukaryotic tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=1.3e-12 Score=82.07 Aligned_cols=46 Identities=41% Similarity=0.611 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHhhHHHHhhhcCCCChhhHHHHHHHHHHHHHhhch
Q psy1231 5 APMADIQESIKAQGDVVRKLKSSKAPKEQIDEEVKKLLELKNQLKI 50 (151)
Q Consensus 5 ~~~~~l~~~i~~qg~~VR~LK~~ka~k~~I~~~V~kLl~LK~ql~~ 50 (151)
+++..|...|..||++||.||+.++++++|+++|++||+||++|+.
T Consensus 1 aS~~eL~~~I~~QGd~VR~LKa~ka~K~~id~aV~~LL~LK~~yk~ 46 (54)
T d1r6ta1 1 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKA 46 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3677899999999999999999999999999999999999999986
No 7
>d1fyja_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS) second repeated element {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=5.4e-12 Score=80.07 Aligned_cols=45 Identities=47% Similarity=0.649 Sum_probs=42.4
Q ss_pred chHHHHHHHHHhhHHHHhhhcCCCChhhHHHHHHHHHHHHHhhch
Q psy1231 6 PMADIQESIKAQGDVVRKLKSSKAPKEQIDEEVKKLLELKNQLKI 50 (151)
Q Consensus 6 ~~~~l~~~i~~qg~~VR~LK~~ka~k~~I~~~V~kLl~LK~ql~~ 50 (151)
+...|..+|..||+.||.||+++|++.+|+++|++||+||++|+.
T Consensus 1 d~~~L~~~V~~QGd~VR~LK~~ka~k~~i~~aV~~LL~LK~~yk~ 45 (57)
T d1fyja_ 1 DSLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKE 45 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999986
No 8
>d1d2da_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS) second repeated element {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.20 E-value=5.7e-12 Score=79.59 Aligned_cols=41 Identities=51% Similarity=0.724 Sum_probs=38.8
Q ss_pred HHHHHHHhhHHHHhhhcCCCChhhHHHHHHHHHHHHHhhch
Q psy1231 10 IQESIKAQGDVVRKLKSSKAPKEQIDEEVKKLLELKNQLKI 50 (151)
Q Consensus 10 l~~~i~~qg~~VR~LK~~ka~k~~I~~~V~kLl~LK~ql~~ 50 (151)
|..+|+.||++||.||+++|++++|+++|++||+||++|+.
T Consensus 2 l~e~I~~QGd~VR~LKa~ka~K~~i~~aV~~LL~LK~~yk~ 42 (56)
T d1d2da_ 2 VYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKE 42 (56)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999986
No 9
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Probab=97.76 E-value=1.3e-05 Score=63.01 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=47.0
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccC
Q psy1231 67 TPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYG 117 (151)
Q Consensus 67 ~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~G 117 (151)
.++|+..++|....+++.|++.+++.+.++||++|.||+|...+++.+..|
T Consensus 23 ~v~G~~~~lP~G~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~ks~~ 73 (268)
T d1nj8a3 23 PIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAE 73 (268)
T ss_dssp TTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCS
T ss_pred CCCccEEECccHHHHHHHHHHHHHHHHHHcCCeEEeehhhhhhHhhhccCC
Confidence 357999999999999999999999999999999999999999999976533
No 10
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]}
Probab=97.75 E-value=1.1e-06 Score=69.35 Aligned_cols=64 Identities=11% Similarity=0.030 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCCccccc-chhhhhhHHhhCCCcchhhhhccccC
Q psy1231 82 RNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGVYWTGY-STAVGFLMIHSVPSAPLWINWTNHLG 149 (151)
Q Consensus 82 ~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (151)
.+++++ +.+++.+|||.+|+||+||++|.+...+- .|. -+.+++|.|+++|.+|..+.+..+.+
T Consensus 6 ~ek~~s-f~~~~~~~Gy~~i~tP~~E~~e~~~~~~F---~D~~g~~l~LRpD~T~~iaR~~~~~~~~~p 70 (275)
T d1usya_ 6 FEKVFS-FYSKATKKGFSPFFVPALEKAEEPAGNFF---LDRKGNLFSIREDFTKTVLNHRKRYSPDSQ 70 (275)
T ss_dssp HHHHHH-HHHHHHHTTCEECCCCSEEECSSCCSSCE---EETTSCEEEECCCHHHHHHHHHTTCTTCCC
T ss_pred HHHHHH-HHHHHHHcCCceeecCcccccccccccee---EcCCCCEEEECCCCcHHHHHHHHHcCCCCC
Confidence 345665 56788899999999999999997654432 222 46688999999999998887655433
No 11
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=97.47 E-value=2.6e-05 Score=63.09 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=47.7
Q ss_pred cccCCCccccCChhhHHHHHHHHHHHHHHH--HHcCCccccCCccccHHhhhcc
Q psy1231 64 ILKTPKGTRDYGPDSTVVRNQVLDKIVKIF--KKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 64 ~~~~pkGtrD~lP~e~~~~~~I~~~i~~~f--~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
.+....|++||+|-.+.++++|++.|++.| .+.||.+|+||++-+.+|+..+
T Consensus 24 iy~g~~G~y~ygP~G~~l~~~i~~~wr~~~v~~~~~~~ev~tp~i~~~~lw~~S 77 (331)
T d1b76a2 24 IYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYS 77 (331)
T ss_dssp GGSCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEEHHHHHHT
T ss_pred hcCCceeEeccCCcHHHHHHHHHHHHHHHHHhccCCeEEEeccccCChHHhccC
Confidence 567789999999999999999999999988 4799999999999999999654
No 12
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]}
Probab=97.24 E-value=8.9e-05 Score=56.82 Aligned_cols=51 Identities=18% Similarity=0.258 Sum_probs=44.9
Q ss_pred ccCCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcc
Q psy1231 65 LKTPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 65 ~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
+..++|+..++|..+.+++.|.+.+.+.+.++||.+|.||++-..+++...
T Consensus 26 ~~~~~G~~~~lP~G~~l~~~l~~~~~~~~~~~G~~eV~~P~l~~~~l~~~s 76 (272)
T d1hc7a2 26 YGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKE 76 (272)
T ss_dssp ECSSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---
T ss_pred cCCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCeEEeeccccchHHhhhc
Confidence 345689999999999999999999999999999999999999988888654
No 13
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=96.60 E-value=0.00046 Score=57.44 Aligned_cols=54 Identities=20% Similarity=0.286 Sum_probs=49.2
Q ss_pred cccCCCccccCChhhHHHHHHHHHHHHHHHH--HcCCccccCCccccHHhhhcccCC
Q psy1231 64 ILKTPKGTRDYGPDSTVVRNQVLDKIVKIFK--KHGAVTIDTPIFELKEVLTGKYGV 118 (151)
Q Consensus 64 ~~~~pkGtrD~lP~e~~~~~~I~~~i~~~f~--~~Gy~~IeTPv~E~~evf~~~~Ge 118 (151)
.|....|+.||.|-.++++++|.+.|.+.|. +-++.+|+||++-+.+|+.++ |.
T Consensus 24 IYGGlaG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kAS-GH 79 (394)
T d1atia2 24 IYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYS-GH 79 (394)
T ss_dssp GGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHT-SH
T ss_pred hccCcccccCcCccHHHHHHHHHHHHHHHHhhccCCEEEecccccCCHHHhhhc-CC
Confidence 6889999999999999999999999998886 478999999999999999875 55
No 14
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]}
Probab=95.72 E-value=0.0031 Score=48.30 Aligned_cols=48 Identities=17% Similarity=0.314 Sum_probs=39.8
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcc
Q psy1231 67 TPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 67 ~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
..+|+..++|..+.+++.|.+.+++.. ..||.+|.||++-..+.+-.+
T Consensus 21 ~~~G~~~~lP~G~~i~~~i~~~~~~~~-~~G~~ev~~P~l~~~~~l~~~ 68 (265)
T d1nj1a3 21 PVKGMHVWMPHGFMIRKNTLKILRRIL-DRDHEEVLFPLLVPEDELAKE 68 (265)
T ss_dssp SSTTCCEECHHHHHHHHHHHHHHHHHH-TTTCEECCCCSEEEHHHHTTS
T ss_pred CCCceEEEcccHHHHHHHHHHHHHHHH-HhcCceehhhhhhhhhhhhhc
Confidence 357999999999999999999998775 559999999988666544333
No 15
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]}
Probab=95.62 E-value=0.0045 Score=48.77 Aligned_cols=49 Identities=8% Similarity=0.024 Sum_probs=45.7
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcc
Q psy1231 67 TPKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 67 ~pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
.-.|+.-|+|..+.+++.|.+.+++...++||++|.||++=..+++..+
T Consensus 18 ~~~G~~~~lP~G~~l~~~L~~~i~e~~~~~G~~eV~~P~L~~~~l~~~s 66 (291)
T d1qf6a4 18 EAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKT 66 (291)
T ss_dssp TSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHH
T ss_pred CCCcceEEccCHHHHHHHHHHHHHHHHHHcCCEEEEcccccchhHHhhh
Confidence 3589999999999999999999999999999999999999999998653
No 16
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=94.86 E-value=0.0066 Score=47.80 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=44.8
Q ss_pred CCccccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcc
Q psy1231 68 PKGTRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 68 pkGtrD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
-.|+.-|+|..+.+++.|.+.+++...++||++|.||.+=..+++...
T Consensus 19 g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~eV~~P~l~~~~l~~~s 66 (291)
T d1nyra4 19 GAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTS 66 (291)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHH
T ss_pred cCcceEEehhHHHHHHHHHHHHHHHHHHcCCEEEECccccchhHhhhh
Confidence 469999999999999999999999999999999999999999998553
No 17
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=92.66 E-value=0.038 Score=43.35 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccccCCccccH
Q psy1231 77 DSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELK 109 (151)
Q Consensus 77 ~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~ 109 (151)
.-..+|..|...+++.|...||.+|+||++...
T Consensus 32 ~~l~~Rs~i~~~iR~ff~~~gflEV~TPil~~~ 64 (335)
T d1b8aa2 32 AIFKIRSSVFKAVRDFFHENGFIEIHTPKIIAT 64 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCccCcc
Confidence 356789999999999999999999999998544
No 18
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.06 E-value=0.073 Score=42.06 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCCcccc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTPIFEL 108 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~ 108 (151)
-..+|..|...+++.|...||.+|+||++-.
T Consensus 43 ilr~Rs~i~~~iR~ff~~~gflEV~TPiL~~ 73 (353)
T d1eova2 43 IFRIQAGVCELFREYLATKKFTEVHTPKLLG 73 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEES
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCC
Confidence 3567889999999999999999999999944
No 19
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=90.69 E-value=0.083 Score=40.80 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCCcccc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTPIFEL 108 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~ 108 (151)
-..+|..|...+++.|...||.+|+||++-.
T Consensus 14 ~l~~Rs~i~~~iR~ff~~~gf~Ev~TP~l~~ 44 (304)
T d1n9wa2 14 PLKVQAALVRGFRRYLDRQDFTEIFTPKVVR 44 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCC----
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCC
Confidence 4567899999999999999999999999843
No 20
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=90.64 E-value=0.088 Score=41.72 Aligned_cols=31 Identities=19% Similarity=0.447 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCCcccc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTPIFEL 108 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~ 108 (151)
-..+|..|...+++.|...||.+|+||++-.
T Consensus 31 ilr~Rs~i~~~iR~ff~~~gFlEV~TPiL~~ 61 (346)
T d1c0aa3 31 RLKTRAKITSLVRRFMDDHGFLDIETPMLTK 61 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCC
Confidence 4467899999999999999999999999854
No 21
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=89.71 E-value=0.12 Score=41.19 Aligned_cols=32 Identities=22% Similarity=0.508 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccccCCcccc
Q psy1231 77 DSTVVRNQVLDKIVKIFKKHGAVTIDTPIFEL 108 (151)
Q Consensus 77 ~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~ 108 (151)
+-+.+|..|...+++.|...||.+|+||++-.
T Consensus 38 ~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~ 69 (356)
T d1l0wa3 38 ENLRLRHRVIKAIWDFLDREGFVQVETPFLTK 69 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCcccc
Confidence 45678999999999999999999999999854
No 22
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=89.21 E-value=0.12 Score=40.60 Aligned_cols=30 Identities=27% Similarity=0.575 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCCccc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTPIFE 107 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E 107 (151)
-+.+|..|...+++.|...||.+|+||++-
T Consensus 22 ~~r~Rs~i~~~iR~ff~~~gFiEV~TPil~ 51 (342)
T d1e1oa2 22 TFVVRSKILAAIRQFMVARGFMEVETPMMQ 51 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 467899999999999999999999999883
No 23
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.63 E-value=0.15 Score=39.64 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCCcccc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTPIFEL 108 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~ 108 (151)
-..+|..|...+++.|...||.+|+||++-.
T Consensus 13 il~~Rs~i~~~iR~ff~~~gf~EV~tPil~~ 43 (293)
T d1nnha_ 13 TLDIQTKILEYMTDFFVKEGFKWLLPVIISP 43 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEECCCCEES
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEcCCcccc
Confidence 4567999999999999999999999998753
No 24
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.89 E-value=1.5 Score=33.62 Aligned_cols=51 Identities=10% Similarity=-0.011 Sum_probs=39.4
Q ss_pred cccCCCccc-cCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcc
Q psy1231 64 ILKTPKGTR-DYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGK 115 (151)
Q Consensus 64 ~~~~pkGtr-D~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~ 115 (151)
.+....|.. ||+|-.+.++++|.+.|.+.|.. .+..|.+|-.-+.+++..+
T Consensus 22 ~~~~~~g~~~dyGP~G~~Lk~ni~~~w~~~~v~-~~~~v~~~d~~~~~~~~~s 73 (290)
T d1g5ha2 22 TAALLSGCHARFGPLGVELRKNLASQWWSSMVV-FREQVFAVDSLHQEPGSSQ 73 (290)
T ss_dssp HHHHHHCCSCCBCHHHHHHHHHHHHHHHHHHTT-TCTTEEECCCCSEECCCCS
T ss_pred ccccccccccccCCcHHHHHHHHHHHHHHHHHh-ccCceeeccccccccCCCc
Confidence 355567887 99999999999999999998754 4457888776666666543
No 25
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=48.21 E-value=7.9 Score=22.71 Aligned_cols=26 Identities=12% Similarity=0.236 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 79 TVVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 79 ~~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
...++.|.+...++|...||..+...
T Consensus 3 ~~rr~~Il~aa~~l~~~~G~~~~ti~ 28 (72)
T d1pb6a1 3 SAKKKAILSAALDTFSQFGFHGTRLE 28 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHhCccccCHH
Confidence 35689999999999999999987654
No 26
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=47.84 E-value=8.1 Score=29.68 Aligned_cols=47 Identities=13% Similarity=0.267 Sum_probs=37.8
Q ss_pred cccCChhhHHHHHHHHHHHHHHHHHcCCccccCCccccHHhhhcccCC
Q psy1231 71 TRDYGPDSTVVRNQVLDKIVKIFKKHGAVTIDTPIFELKEVLTGKYGV 118 (151)
Q Consensus 71 trD~lP~e~~~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~evf~~~~Ge 118 (151)
++=+-++.+.+.+.+.+-+.+.....||.+|.+|.|=..+++.+. |.
T Consensus 48 fy~l~g~~a~Le~AL~~~~ld~~~~~gy~~v~~P~lv~~~~~~~~-G~ 94 (311)
T d1seta2 48 SYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGT-GH 94 (311)
T ss_dssp CCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHH-TC
T ss_pred eEEEECHHHHHHHHHHHHHHHhhhcccceEEeechhhccchhhhc-cc
Confidence 344445667788888888899889999999999999999998653 44
No 27
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]}
Probab=45.37 E-value=5.6 Score=30.24 Aligned_cols=29 Identities=21% Similarity=0.336 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCccccH
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTPIFELK 109 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTPv~E~~ 109 (151)
-...+.+.++++|...||.+++.|.+|..
T Consensus 18 Pl~~~~~~i~~if~~~GF~~~~gp~ies~ 46 (266)
T d1jjca_ 18 PITLMERELVEIFRALGYQAVEGPEVESE 46 (266)
T ss_dssp HHHHHHHHHHHHHHTTTCEECCCCSEEEH
T ss_pred hHHHHHHHHHHHHHHcCCeEeeCCccccc
Confidence 35678888999999999999999988854
No 28
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=42.68 E-value=9.7 Score=22.10 Aligned_cols=24 Identities=8% Similarity=0.088 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..++.|.+...++|..+||..+..
T Consensus 3 ~~r~~Il~aa~~l~~~~G~~~~t~ 26 (73)
T d1t56a1 3 DRELAILATAENLLEDRPLADISV 26 (73)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGCCH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCH
Confidence 467899999999999999998754
No 29
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.09 E-value=13 Score=21.90 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccC
Q psy1231 79 TVVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 79 ~~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
...+++|.+...++|...||..+..
T Consensus 3 ~~tre~Il~aa~~~~~~~G~~~~ti 27 (79)
T d2fbqa1 3 SETVERILDAAEQLFAEKGFAETSL 27 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHCSTTCCH
T ss_pred hHHHHHHHHHHHHHHHHhCcccccH
Confidence 4578999999999999999987654
No 30
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=39.86 E-value=15 Score=21.17 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 77 DSTVVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 77 ~e~~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.....++.|.+...++|..+||..+...
T Consensus 3 R~~~~r~~Il~aa~~l~~~~G~~~~t~~ 30 (68)
T d2id3a1 3 RTARIREAVLLAAGDALAADGFDALDLG 30 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred CcHHHHHHHHHHHHHHHHHhCcccCCHH
Confidence 3456789999999999999999988744
No 31
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=38.92 E-value=13 Score=21.50 Aligned_cols=24 Identities=17% Similarity=0.389 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..++.|.+...++|...||..+..
T Consensus 5 ~tr~~Il~aa~~l~~~~G~~~~t~ 28 (75)
T d3c07a1 5 QTRALILETAMRLFQERGYDRTTM 28 (75)
T ss_dssp HHHHHHHHHHHHHHHHTCSTTCCH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCH
Confidence 468999999999999999998764
No 32
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=38.20 E-value=11 Score=21.95 Aligned_cols=27 Identities=7% Similarity=0.191 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
....++.|.+...++|..+||..|..-
T Consensus 4 ~~~t~~~I~~aa~~l~~~~G~~~~sv~ 30 (71)
T d2iu5a1 4 SIITQKIIAKAFKDLMQSNAYHQISVS 30 (71)
T ss_dssp TSHHHHHHHHHHHHHHHHSCGGGCCHH
T ss_pred hHHHHHHHHHHHHHHHHHcCcccCCHH
Confidence 345789999999999999999987643
No 33
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.97 E-value=14 Score=21.51 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccC
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
....++.|.+...++|..+||..+..
T Consensus 5 ~~~~r~~Il~aa~~l~~~~G~~~~si 30 (76)
T d2fd5a1 5 KTQTRARILGAATQALLERGAVEPSV 30 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccH
Confidence 34568999999999999999997754
No 34
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=37.52 E-value=16 Score=21.57 Aligned_cols=26 Identities=8% Similarity=0.314 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCccccC
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
....++.|.+...++|...||..+..
T Consensus 5 a~~~r~~Il~aa~~l~~~~G~~~~t~ 30 (78)
T d2o7ta1 5 ALKRREHIITTTCNLYRTHHHDSLTM 30 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCH
Confidence 34568999999999999999998764
No 35
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=36.29 E-value=14 Score=21.49 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHcCCccccCC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.|+.|++...++|...||..+...
T Consensus 3 tr~~Il~aa~~l~~~~G~~~~si~ 26 (73)
T d1sgma1 3 SREKILHTASRLSQLQGYHATGLN 26 (73)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHhCcccCCHH
Confidence 578999999999999999987654
No 36
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=35.90 E-value=14 Score=21.36 Aligned_cols=24 Identities=21% Similarity=0.385 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHcCCccccCC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.++.|.+...++|..+||..+..-
T Consensus 2 ~r~~Il~aa~~l~~~~G~~~~s~~ 25 (71)
T d1jt6a1 2 LKDKILGVAKELFIKNGYNATTTG 25 (71)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHhCccccCHH
Confidence 578999999999999999977543
No 37
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.86 E-value=15 Score=21.17 Aligned_cols=23 Identities=17% Similarity=0.424 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHcCCccccC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
.++.|.+...++|..+||..+..
T Consensus 3 tr~~Il~aa~~l~~~~G~~~~ti 25 (68)
T d2d6ya1 3 TKARIFEAAVAEFARHGIAGARI 25 (68)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHHHHhCccccCH
Confidence 57899999999999999998754
No 38
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=34.21 E-value=8.6 Score=22.34 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHcCCccccCC
Q psy1231 82 RNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 82 ~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
++.|.++..++|...||..+...
T Consensus 2 re~iL~aA~~lf~~~G~~~~ti~ 24 (69)
T d2i10a1 2 DQVALQTAMELFWRQGYEGTSIT 24 (69)
T ss_dssp CHHHHHHHHHHHHHHTTTTCCHH
T ss_pred HHHHHHHHHHHHHHHCcccCCHH
Confidence 47889999999999999987653
No 39
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=33.99 E-value=14 Score=21.34 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHcCCccccC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
.+++|.+...++|..+||..+..
T Consensus 2 r~~~Il~aa~~l~~~~G~~~~ti 24 (72)
T d1vi0a1 2 KYMQIIDAAVEVIAENGYHQSQV 24 (72)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCH
T ss_pred HHHHHHHHHHHHHHHhCcccccH
Confidence 37889999999999999998754
No 40
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.92 E-value=14 Score=21.11 Aligned_cols=23 Identities=17% Similarity=0.446 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHcCCccccCC
Q psy1231 82 RNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 82 ~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
++.|++...++|..+||..+..-
T Consensus 2 R~~il~aa~~l~~~~G~~~~si~ 24 (70)
T d2gena1 2 KDEILQAALACFSEHGVDATTIE 24 (70)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHhCcccCCHH
Confidence 68899999999999999987653
No 41
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=33.50 E-value=17 Score=21.08 Aligned_cols=24 Identities=8% Similarity=0.131 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHcCCccccCC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.++.|.+...++|..+||..+..-
T Consensus 5 ~r~~Il~aa~~l~~~~G~~~~s~~ 28 (74)
T d1v7ba1 5 KKEMILRTAIDYIGEYSLETLSYD 28 (74)
T ss_dssp HHHHHHHHHHHHHHHSCSTTCCHH
T ss_pred HHHHHHHHHHHHHHHhCccccCHH
Confidence 478999999999999999987643
No 42
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=32.94 E-value=14 Score=21.17 Aligned_cols=24 Identities=4% Similarity=0.091 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHcCCccccCC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.+++|.+...++|..+||..+..-
T Consensus 2 t~e~i~~aa~~l~~~~G~~~~ti~ 25 (69)
T d2np5a1 2 SPERLAAALFDVAAESGLEGASVR 25 (69)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred hHHHHHHHHHHHHHHhCccccCHH
Confidence 368899999999999999987643
No 43
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=31.35 E-value=19 Score=21.22 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..++.|.+...++|...||..+..
T Consensus 11 ~~r~~Il~aa~~l~~~~G~~~~ti 34 (81)
T d1rkta1 11 KRQAEILEAAKTVFKRKGFELTTM 34 (81)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCCH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCH
Confidence 568899999999999999998753
No 44
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=31.27 E-value=17 Score=21.19 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..++.|.+...++|...||..+..
T Consensus 6 ~~r~~Il~aa~~l~~~~G~~~~s~ 29 (77)
T d2gfna1 6 ERRRALADAVLALIAREGISAVTT 29 (77)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCH
T ss_pred HHHHHHHHHHHHHHHHhCccccCH
Confidence 468999999999999999988653
No 45
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=30.95 E-value=18 Score=21.19 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
..++.|.+...++|...||..+.+.
T Consensus 4 ~tr~~Il~aa~~l~~~~G~~~~si~ 28 (73)
T d2fx0a1 4 QTMENILKAAKKKFGERGYEGTSIQ 28 (73)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHHhCcccCcHH
Confidence 4688999999999999999987654
No 46
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=29.92 E-value=21 Score=20.76 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 79 TVVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 79 ~~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
...+++|++...++|..+||..+...
T Consensus 4 ~~tr~~il~aa~~l~~~~G~~~~t~~ 29 (75)
T d2hyja1 4 QATRGRILGRAAEIASEEGLDGITIG 29 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccCcHH
Confidence 46789999999999999999987654
No 47
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=29.81 E-value=9.8 Score=22.22 Aligned_cols=25 Identities=12% Similarity=0.197 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
..++.|.+...++|..+||..+..-
T Consensus 2 err~~Il~aa~~l~~~~G~~~~ti~ 26 (72)
T d2g3ba1 2 ERRDAILKASATAIAQRGIRGLRVN 26 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCHH
Confidence 5689999999999999999877654
No 48
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=28.74 E-value=21 Score=20.53 Aligned_cols=24 Identities=13% Similarity=0.335 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..++.|.+...++|...||..+..
T Consensus 5 ~~r~~il~aa~~l~~~~G~~~~si 28 (71)
T d1ui5a1 5 QTRATIIGAAADLFDRRGYESTTL 28 (71)
T ss_dssp THHHHHHHHHHHHHHHHCTTTCCH
T ss_pred HHHHHHHHHHHHHHHHhCccccCH
Confidence 357899999999999999998754
No 49
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=27.87 E-value=27 Score=20.04 Aligned_cols=26 Identities=8% Similarity=0.187 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 79 TVVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 79 ~~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
...++.|.+...++|...||..+..-
T Consensus 3 ~~~r~~Il~aa~~l~~~~G~~~~t~~ 28 (69)
T d2fq4a1 3 IETQKAILSASYELLLESGFKAVTVD 28 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccCCHH
Confidence 45789999999999999999987643
No 50
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=27.11 E-value=23 Score=20.48 Aligned_cols=25 Identities=8% Similarity=0.121 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
..++.|.+...++|..+||..+..-
T Consensus 4 ~~r~~Il~aa~~l~~~~G~~~~s~~ 28 (74)
T d2g7sa1 4 SKADDILQCARTLIIRGGYNSFSYA 28 (74)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred HHHHHHHHHHHHHHHHhCccccCHH
Confidence 4578899999999999999987543
No 51
>d1wd7a_ c.113.1.1 (A:) Probable uroporphyrinogen-III synthase {Thermus thermophilus [TaxId: 274]}
Probab=26.20 E-value=16 Score=26.25 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCCccccCCccccH
Q psy1231 87 DKIVKIFKKHGAVTIDTPIFELK 109 (151)
Q Consensus 87 ~~i~~~f~~~Gy~~IeTPv~E~~ 109 (151)
+.+...++++|+.+|..|+++..
T Consensus 13 e~~~~lle~~G~~p~~~P~i~i~ 35 (254)
T d1wd7a_ 13 EAFKALAEKLGFTPLLFPVQATE 35 (254)
T ss_dssp HHHHHHHHHTTCEEEECCCBCSS
T ss_pred HHHHHHHHHCCCcEEEecceeee
Confidence 44667788899999999997654
No 52
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.30 E-value=30 Score=20.10 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcccc
Q psy1231 79 TVVRNQVLDKIVKIFKKHGAVTID 102 (151)
Q Consensus 79 ~~~~~~I~~~i~~~f~~~Gy~~Ie 102 (151)
...++.|++...++|...||..+.
T Consensus 8 ~~~r~~il~aa~~l~~~~G~~~~t 31 (79)
T d2oi8a1 8 TQVRAEIKDHAWEQIATAGASALS 31 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred HHHHHHHHHHHHHHHHHhCccccC
Confidence 457899999999999999998765
No 53
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=22.93 E-value=26 Score=20.08 Aligned_cols=23 Identities=9% Similarity=0.268 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHcCCccccCC
Q psy1231 82 RNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 82 ~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
++.|.+...++|...||..+...
T Consensus 5 ~e~Il~aa~~l~~~~G~~~~t~~ 27 (72)
T d1zk8a1 5 LQKIVETAAEIADANGVQEVTLA 27 (72)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHH
T ss_pred HHHHHHHHHHHHHHhCCCcccHH
Confidence 68899999999999999987653
No 54
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=21.19 E-value=9.7 Score=22.39 Aligned_cols=24 Identities=29% Similarity=0.429 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccccC
Q psy1231 80 VVRNQVLDKIVKIFKKHGAVTIDT 103 (151)
Q Consensus 80 ~~~~~I~~~i~~~f~~~Gy~~IeT 103 (151)
..|+.|.+...++|...||..+..
T Consensus 3 ~rR~~Il~aa~~l~~~~G~~~~ti 26 (75)
T d2id6a1 3 SKRDAILKAAVEVFGKKGYDRATT 26 (75)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHHHhCccccCH
Confidence 358899999999999999987654
No 55
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=20.75 E-value=35 Score=20.31 Aligned_cols=22 Identities=14% Similarity=0.246 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCc
Q psy1231 78 STVVRNQVLDKIVKIFKKHGAV 99 (151)
Q Consensus 78 e~~~~~~I~~~i~~~f~~~Gy~ 99 (151)
....++.|.+...++|...||.
T Consensus 10 ~~~tr~~Il~aa~~l~~~~G~~ 31 (88)
T d1t33a1 10 GEQAKSQLIAAALAQFGEYGLH 31 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 4456899999999999999995
No 56
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.00 E-value=36 Score=19.32 Aligned_cols=24 Identities=17% Similarity=0.356 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHcCCccccCC
Q psy1231 81 VRNQVLDKIVKIFKKHGAVTIDTP 104 (151)
Q Consensus 81 ~~~~I~~~i~~~f~~~Gy~~IeTP 104 (151)
.++.|.+...++|...||..+..-
T Consensus 5 tr~~Il~aa~~l~~~~g~~~~si~ 28 (68)
T d2g7la1 5 SRRWIVDTAVALMRAEGLEKVTMR 28 (68)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCCHH
T ss_pred hHHHHHHHHHHHHHHhCcccCCHH
Confidence 367899999999999999987653
Done!