BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12310
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6QGC0|PDLI3_PIG PDZ and LIM domain protein 3 OS=Sus scrofa GN=PDLIM3 PE=2 SV=1
Length = 365
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGT-PAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R++GG D + P++IT++ PG+ AAA L GD+I I Y + + H DA + +++
Sbjct: 13 WGFRLSGGIDFNQPLIITRITPGSKAAAANLCPGDVILAIDGYGTESMTHADAQDRIKAA 72
Query: 112 DTSISLGIQR 121
+ L I R
Sbjct: 73 AHQLCLKIDR 82
>sp|Q9PU47|PDLI3_CHICK PDZ and LIM domain protein 3 OS=Gallus gallus GN=PDLIM3 PE=1 SV=1
Length = 315
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R++GG D + P++IT++ PG+ A+ A L GDII I + ++ H DA +++
Sbjct: 13 WGFRLSGGIDFNQPLIITRITPGSKASTANLCPGDIIVAINGLSTENMTHNDAQERIKAA 72
Query: 112 DTSISLGIQR 121
+SL I+R
Sbjct: 73 AHQLSLRIER 82
>sp|Q66HS7|PDLI3_RAT PDZ and LIM domain protein 3 OS=Rattus norvegicus GN=Pdlim3 PE=1
SV=2
Length = 362
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R++GG D + P+VIT++ PG+ A AA L GD+I I + + + H DA + +++
Sbjct: 13 WGFRLSGGIDFNQPLVITRITPGSKAEAANLCPGDVILAIDGFGTESMTHADAQDRIKAA 72
Query: 112 DTSISLGIQR 121
+ L I R
Sbjct: 73 SYQLCLKIDR 82
>sp|O70209|PDLI3_MOUSE PDZ and LIM domain protein 3 OS=Mus musculus GN=Pdlim3 PE=1 SV=1
Length = 316
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGT-PAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R++GG D + P+VIT++ PG+ AAA L GD+I I + + + H DA + +++
Sbjct: 13 WGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA 72
Query: 112 DTSISLGIQR 121
+ L I R
Sbjct: 73 SYQLCLKIDR 82
>sp|Q53GG5|PDLI3_HUMAN PDZ and LIM domain protein 3 OS=Homo sapiens GN=PDLIM3 PE=1 SV=1
Length = 364
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 41 TVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGT-PAAAELKRGDIIRKIGDYDSRDL 99
TV++ P WG R++GG D + P+VIT++ PG+ AAA L GD+I I + + +
Sbjct: 4 TVILPGPA---PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESM 60
Query: 100 RHKDATNFFQSSDTSISLGIQRN 122
H DA + +++ + L I R
Sbjct: 61 THADAQDRIKAAAHQLCLKIDRG 83
>sp|Q3SYZ8|PDLI3_BOVIN PDZ and LIM domain protein 3 OS=Bos taurus GN=PDLIM3 PE=2 SV=1
Length = 316
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGT-PAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R++GG D + P+VIT++ PG+ AAA L GD+I I + + + H DA + +++
Sbjct: 13 WGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA 72
Query: 112 DTSISLGIQR 121
+ L I R
Sbjct: 73 GHQLCLKIDR 82
>sp|A1ZA47|ZASP_DROME PDZ and LIM domain protein Zasp OS=Drosophila melanogaster
GN=Zasp52 PE=1 SV=2
Length = 2194
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D P+++ KV G+ + A L+ GD + KI D D +LRHKDA + S
Sbjct: 19 WGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRS 78
Query: 112 DTSISLGIQRNPPGEKKAASGSRSVTPLPIVDYCQKESKASSASMSVVNSFHDFLDHQHV 171
+ + +QR + + + +V P P Y Q +K S A H D QH+
Sbjct: 79 GNNFVITVQRGGSTWRPHVTPTGNV-PQPNSPYLQTVTKTSLA--------HKQQDSQHI 129
Query: 172 HRA-QAVASPFELSSEHDLNYVIKEQ 196
A PF + + ++ +Q
Sbjct: 130 GCGYNNAARPFSNGGDGGVKSIVNKQ 155
>sp|O75112|LDB3_HUMAN LIM domain-binding protein 3 OS=Homo sapiens GN=LDB3 PE=1 SV=2
Length = 727
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
+++V + P WG R+ GG D + P+ I+++ PG+ AA ++L +GD++ I ++
Sbjct: 2 SYSVTLTGPG---PWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTD 58
Query: 98 DLRHKDATNFFQSSDTSISLGIQRNPPGEKKAASGSRSVTPLPIVDY 144
+ H +A N +S+ ++SL +Q++ + + TPLP++ +
Sbjct: 59 TMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPH 105
>sp|Q3T0C8|PDLI2_BOVIN PDZ and LIM domain protein 2 OS=Bos taurus GN=PDLIM2 PE=2 SV=1
Length = 348
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYP-GTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG RI+GG D +PI++TKV G AA+L+ GDII I ++D+ H +A + + S
Sbjct: 13 WGFRISGGRDFHTPIMVTKVTERGKAEAADLRPGDIIVSINGESAKDMLHAEAQSKIRQS 72
Query: 112 DTSISLGIQRNPPGEKKAASGSRSVTPL 139
+ + L + R A+G S+ L
Sbjct: 73 PSPLRLQLDRPQAASPGQANGESSLEVL 100
>sp|Q9JKS4|LDB3_MOUSE LIM domain-binding protein 3 OS=Mus musculus GN=Ldb3 PE=1 SV=1
Length = 723
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
+++V + P WG R+ GG D + P+ I+++ PG+ AA ++L +GD++ I ++
Sbjct: 2 SYSVTLTGPG---PWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTD 58
Query: 98 DLRHKDATNFFQSSDTSISLGIQRN 122
+ H +A N +S+ ++SL +Q++
Sbjct: 59 TMTHLEAQNKIKSASYNLSLTLQKS 83
>sp|Q9Z1Z9|PDLI7_RAT PDZ and LIM domain protein 7 OS=Rattus norvegicus GN=Pdlim7 PE=1
SV=1
Length = 457
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDS 96
++F VV++ P WG R+ GG D + P+ I+++ PG AA A + GD + I ++
Sbjct: 2 DSFKVVLEGPA---PWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENA 58
Query: 97 RDLRHKDATNFFQSSDTSISLGIQRNPPGEKK 128
L H +A N ++ +SLG+ R P + K
Sbjct: 59 GSLTHIEAQNKIRACGERLSLGLSRAQPAQSK 90
>sp|Q5E9E1|PDLI1_BOVIN PDZ and LIM domain protein 1 OS=Bos taurus GN=PDLIM1 PE=2 SV=3
Length = 328
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
T +V++ P WG R+ GG D + P+ I++V PG+ AA L GD+I I ++
Sbjct: 3 TLQIVLQGPG---PWGFRLVGGKDFEQPLAISRVTPGSKAAIGNLCVGDVITAIDGENTS 59
Query: 98 DLRHKDATNFFQSSDTSISLGIQRN 122
++ H +A N + +++L + R+
Sbjct: 60 NMTHLEAQNKIKGCTDNMTLTVARS 84
>sp|O70400|PDLI1_MOUSE PDZ and LIM domain protein 1 OS=Mus musculus GN=Pdlim1 PE=2 SV=4
Length = 327
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
T +V++ P WG R+ GG D + P+ I++V PG+ AA A L GD+I I D+
Sbjct: 3 TQQIVLQGPG---PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTS 59
Query: 98 DLRHKDATNFFQSSDTSISLGIQRN 122
+ H +A N + +++L + R+
Sbjct: 60 SMTHLEAQNKIKGCADNMTLTVSRS 84
>sp|O00151|PDLI1_HUMAN PDZ and LIM domain protein 1 OS=Homo sapiens GN=PDLIM1 PE=1 SV=4
Length = 329
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D + P+ I++V PG+ AA A L GD+I I ++ ++ H +A N +
Sbjct: 14 WGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGC 73
Query: 112 DTSISLGIQRN 122
+++L + R+
Sbjct: 74 TDNLTLTVARS 84
>sp|P52944|PDLI1_RAT PDZ and LIM domain protein 1 OS=Rattus norvegicus GN=Pdlim1 PE=2
SV=4
Length = 327
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
T +V++ P WG R+ GG D + P+ I++V PG+ AA A L GD+I I D+
Sbjct: 3 TQQIVLQGPG---PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTS 59
Query: 98 DLRHKDATNFFQSSDTSISLGIQRN 122
+ H +A N + +++L + R+
Sbjct: 60 SMTHLEAQNKIKGCVDNMTLTVSRS 84
>sp|Q8R1G6|PDLI2_MOUSE PDZ and LIM domain protein 2 OS=Mus musculus GN=Pdlim2 PE=1 SV=1
Length = 349
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYP-GTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG RI+GG D +PI++TKV G AA+L+ GDII I + ++ H +A + + S
Sbjct: 13 WGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQS 72
Query: 112 DTSISLGIQRN 122
+ + L + R+
Sbjct: 73 ASPLRLQLDRS 83
>sp|Q9NR12|PDLI7_HUMAN PDZ and LIM domain protein 7 OS=Homo sapiens GN=PDLIM7 PE=1 SV=1
Length = 457
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDS 96
++F VV++ P WG R+ GG D + P+ I+++ PG AA A + GD + I ++
Sbjct: 2 DSFKVVLEGPA---PWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENA 58
Query: 97 RDLRHKDATNFFQSSDTSISLGIQRNPPGEKKAASGS 133
L H +A N ++ +SLG+ R P + K S
Sbjct: 59 GSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKAS 95
>sp|Q3TJD7|PDLI7_MOUSE PDZ and LIM domain protein 7 OS=Mus musculus GN=Pdlim7 PE=2 SV=1
Length = 457
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDS 96
++F VV++ P WG R+ GG D + P+ I+++ PG AA A + GD + I ++
Sbjct: 2 DSFKVVLEGPA---PWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENA 58
Query: 97 RDLRHKDATNFFQSSDTSISLGIQRNPPGEKKAASGSRSVTP 138
L H +A N ++ +SLG+ R P + K +++TP
Sbjct: 59 GSLTHIEAQNKIRACGERLSLGLSRAQPVQSKP---QKALTP 97
>sp|Q6AYD6|PDLI2_RAT PDZ and LIM domain protein 2 OS=Rattus norvegicus GN=Pdlim2 PE=1
SV=1
Length = 349
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYP-GTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG RI+GG D +PI++TKV G AA+L+ GDII I + + H +A + + S
Sbjct: 13 WGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGESAESMLHAEAQSKIRQS 72
Query: 112 DTSISLGIQRN 122
+ + L + R+
Sbjct: 73 ASPLRLQLDRS 83
>sp|Q6GLJ6|PDLI3_XENLA PDZ and LIM domain protein 3 OS=Xenopus laevis GN=pdlim3 PE=2 SV=1
Length = 358
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D + P+VI+++ PG+ ++ A L GD+I I + + + H +A + +++
Sbjct: 13 WGFRLTGGIDFNQPLVISRITPGSKSSVANLCPGDVILAIDGFSTETMTHAEAQDRIKAA 72
Query: 112 DTSISLGIQR 121
+ L I R
Sbjct: 73 TDQLCLKIDR 82
>sp|Q6P7E4|PDLI7_DANRE PDZ and LIM domain protein 7 OS=Danio rerio GN=pdlim7 PE=2 SV=1
Length = 419
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDS 96
N + V + P WG R+ GG D ++P+ ++++ PG AA A + GD + I D ++
Sbjct: 2 NIYCVTLNGPA---PWGFRLQGGKDFNTPLTVSRLTPGGKAAQAGVGVGDWVVSIFDANA 58
Query: 97 RDLRHKDATNFFQSSDTSISLGIQR 121
++ H +A N +++ S+ L + R
Sbjct: 59 EEMTHVEAQNKIRAATDSLKLTLSR 83
>sp|Q3SX40|PDLI7_BOVIN PDZ and LIM domain protein 7 OS=Bos taurus GN=PDLIM7 PE=2 SV=1
Length = 424
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDS 96
++F VV++ P WG R+ GG D + P+ I+++ PG AA A + GD + I ++
Sbjct: 2 DSFKVVLEGPA---PWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENA 58
Query: 97 RDLRHKDATNFFQSSDTSISLGIQRNPPGEKK 128
L H +A N ++ +SL + R P + K
Sbjct: 59 GGLTHIEAQNKIRACGERLSLSLSRAQPAQSK 90
>sp|Q9PW72|PDLI4_CHICK PDZ and LIM domain protein 4 OS=Gallus gallus GN=PDLIM4 PE=2 SV=1
Length = 330
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D +P+ I+++ PG+ AA A L GDII I + + H +A N ++
Sbjct: 13 WGFRLVGGKDFSTPLTISRINPGSKAALANLCPGDIILAINGESTEAMTHLEAQNKIKAC 72
Query: 112 DTSISLGIQR 121
+ L + R
Sbjct: 73 VEQLLLSVSR 82
>sp|P70271|PDLI4_MOUSE PDZ and LIM domain protein 4 OS=Mus musculus GN=Pdlim4 PE=1 SV=3
Length = 330
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
T +V ++ P+ WG R+ GG D +P+ I++V+ G+ AA A L GD+I+ I +
Sbjct: 2 THSVTLRGPS---PWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTE 58
Query: 98 DLRHKDATNFFQSSDTSISLGIQR 121
+ H +A N + ++L + R
Sbjct: 59 LMTHLEAQNRIKGCHDHLTLSVSR 82
>sp|P28191|PTP1_CAEEL Tyrosine-protein phosphatase 1 OS=Caenorhabditis elegans GN=ptp-1
PE=2 SV=3
Length = 1026
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 28 KSGKPAQPHQNTFTVVIK-RPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA---AAELK 83
+S K + P V IK RP+RH +G + GG D + P+++++V PG+ A L
Sbjct: 602 QSNKSSSPVGEDQVVTIKMRPDRHGRFGFNVKGGADQNYPVIVSRVAPGSSADKCQPRLN 661
Query: 84 RGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLG 118
GD + I D + H F +S+ + ++ G
Sbjct: 662 EGDQVLFIDGRDVSTMSHDHVVQFIRSARSGLNGG 696
>sp|P50479|PDLI4_HUMAN PDZ and LIM domain protein 4 OS=Homo sapiens GN=PDLIM4 PE=1 SV=2
Length = 330
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 41 TVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDL 99
+V ++ P+ WG R+ GG D +P+ I++V+ G+ AA A L GD+I+ I + +
Sbjct: 4 SVTLRGPS---PWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELM 60
Query: 100 RHKDATNFFQSSDTSISLGIQR 121
H +A N + ++L + R
Sbjct: 61 THLEAQNRIKGCHDHLTLSVSR 82
>sp|P36202|PDLI4_RAT PDZ and LIM domain protein 4 OS=Rattus norvegicus GN=Pdlim4 PE=2
SV=2
Length = 330
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSR 97
T V ++ P+ WG R+ GG D +P+ I++V+ G+ AA A L GD I+ I +
Sbjct: 2 THAVTLRGPS---PWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDSIQAINGESTE 58
Query: 98 DLRHKDATNFFQSSDTSISLGIQR 121
+ H +A N + ++L + R
Sbjct: 59 LMTHLEAQNRIKGCHDHLTLSVSR 82
>sp|Q96HC4|PDLI5_HUMAN PDZ and LIM domain protein 5 OS=Homo sapiens GN=PDLIM5 PE=1 SV=5
Length = 596
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D + P+ I+ + G AA A ++ GD++ I +++ + H +A N +
Sbjct: 14 WGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC 73
Query: 112 DTSISLGIQRNPPGEKKAASGSRSVTPLPI 141
S+++ +QR AS + P+P+
Sbjct: 74 TGSLNMTLQR--------ASAAPKPEPVPV 95
>sp|Q3T005|PDLI4_BOVIN PDZ and LIM domain protein 4 OS=Bos taurus GN=PDLIM4 PE=2 SV=1
Length = 331
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 41 TVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDL 99
+V ++ P+ WG R+ GG D P+ I++V+ G+ AA A L GD+I+ I + +
Sbjct: 4 SVTLRGPS---PWGFRLVGGRDFSVPLTISRVHAGSKAALAALCPGDLIQAINGESTELM 60
Query: 100 RHKDATNFFQSSDTSISLGIQR 121
H +A N + ++L + R
Sbjct: 61 THLEAQNRIKGCRDHLTLSVSR 82
>sp|Q9GKU1|PDLI2_MACFA PDZ and LIM domain protein 2 OS=Macaca fascicularis GN=PDLIM2 PE=2
SV=1
Length = 352
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYP-GTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG RI GG D +PI++TKV G A+L+ GDII I + + H +A + + S
Sbjct: 13 WGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQS 72
Query: 112 DTSISLGIQRN 122
+ + L + R+
Sbjct: 73 PSPLRLQLDRS 83
>sp|Q96JY6|PDLI2_HUMAN PDZ and LIM domain protein 2 OS=Homo sapiens GN=PDLIM2 PE=1 SV=1
Length = 352
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYP-GTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG RI GG D +PI++TKV G A+L+ GDII I + + H +A + + S
Sbjct: 13 WGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQS 72
Query: 112 DTSISLGIQRN 122
+ + L + R+
Sbjct: 73 PSPLRLQLDRS 83
>sp|Q9WU22|PTN4_MOUSE Tyrosine-protein phosphatase non-receptor type 4 OS=Mus musculus
GN=Ptpn4 PE=1 SV=1
Length = 926
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 14 DALTSTNQAL----IPTRKSGKPAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVI 69
D +T TN++ P + + PH N + +K P+ + +G + GG D P+++
Sbjct: 486 DLVTHTNESFDVPSSPEKSTPNGGIPHDNLVLIKMK-PDENGRFGFNVKGGYDQKMPVIV 544
Query: 70 TKVYPGTPA---AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
++V PGTPA L GD + I D + H F ++S
Sbjct: 545 SRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 589
>sp|Q5PYH6|DLG1_DANRE Disks large homolog 1 OS=Danio rerio GN=dlg1 PE=2 SV=2
Length = 873
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 42 VVIKRPNRHHSWGLRIAGGCD-----LDSPIVITKVYPGTPAAAE--LKRGDIIRKIGDY 94
+ ++R N G IAGG D D I ITK+ PG AA + L+ D I ++ D
Sbjct: 231 ITLERGN--SGLGFSIAGGTDNPHIGEDPSIFITKIIPGGAAAQDGRLRVNDCILRVNDV 288
Query: 95 DSRDLRHKDATNFFQSSDTSISLGIQRNPPGEKK 128
D RD+ H +A + + + L ++R P +K
Sbjct: 289 DVRDVTHSNAVEALKEAGCIVRLYVRRRKPLSEK 322
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS 110
G I GG D + I I+ + G PA EL++GD I + D R H+ A ++
Sbjct: 484 LGFNIVGGEDGEG-IFISFILAGGPADLCGELRKGDRIVSVNGVDLRSATHEQAAAALKN 542
Query: 111 SDTSISLGIQRNP 123
+ ++++ Q P
Sbjct: 543 AGQTVTIIAQYRP 555
>sp|Q62920|PDLI5_RAT PDZ and LIM domain protein 5 OS=Rattus norvegicus GN=Pdlim5 PE=1
SV=2
Length = 591
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D + P+ I+ + G A+ A ++ GD++ I ++ + H +A N ++
Sbjct: 14 WGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC 73
Query: 112 DTSISLGIQR 121
S+++ +QR
Sbjct: 74 TGSLNMTLQR 83
>sp|Q8CI51|PDLI5_MOUSE PDZ and LIM domain protein 5 OS=Mus musculus GN=Pdlim5 PE=1 SV=4
Length = 591
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 53 WGLRIAGGCDLDSPIVITKVYPGTPAA-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
WG R+ GG D + P+ I+ + G A+ A ++ GD++ I ++ + H +A N ++
Sbjct: 14 WGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC 73
Query: 112 DTSISLGIQR 121
S+++ +QR
Sbjct: 74 TGSLNMTLQR 83
>sp|Q2KIB6|LIN7B_BOVIN Protein lin-7 homolog B OS=Bos taurus GN=LIN7B PE=2 SV=1
Length = 201
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I++V PG A LKRGD + + +
Sbjct: 93 VVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQ 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 153 HEKAVELLKAAQGSVKLVVRYTP 175
>sp|Q9HAP6|LIN7B_HUMAN Protein lin-7 homolog B OS=Homo sapiens GN=LIN7B PE=1 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I++V PG A LKRGD + + +
Sbjct: 93 VVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQ 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 153 HEKAVELLKAAQGSVKLVVRYTP 175
>sp|Q5PYH5|DLG1L_DANRE Discs large homolog 1-like protein OS=Danio rerio GN=dlg1l PE=2
SV=1
Length = 827
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 42 VVIKRPNRHHSWGLRIAGGCD-----LDSPIVITKVYPGTPAAAE--LKRGDIIRKIGDY 94
+ ++R N G IAGG D D I ITKV PG AA + L+ D+I ++ +
Sbjct: 160 ITLERGNS--GLGFSIAGGTDNPHIGEDPSIFITKVIPGGAAAQDGRLRVNDVILRVNEV 217
Query: 95 DSRDLRHKDATNFFQSSDTSISLGIQRNPPGEKKA 129
D RD+ H A + + + + L ++R +K
Sbjct: 218 DVRDVTHSKAVEALKEAGSLVRLYVRRRKSASEKV 252
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 54 GLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111
G I GG D + I I+ + G PA EL++GD + + D R H+ A +++
Sbjct: 414 GFNIVGGEDGEG-IFISFILAGGPADLCGELRKGDRLVSVNGIDLRGATHEQAAAALKNA 472
Query: 112 DTSISLGIQRNP 123
++++ Q P
Sbjct: 473 GQTVTIVAQYRP 484
>sp|Q8BH60|GOPC_MOUSE Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Mus musculus GN=Gopc PE=1 SV=1
Length = 463
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 50 HHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNF 107
H G+ I GG + PI+I++++PG PA L GD I + + RD +HK+A
Sbjct: 297 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 356
Query: 108 FQSSDTSISLGI 119
I +
Sbjct: 357 LSQQRGEIEFEV 368
>sp|Q9HD26|GOPC_HUMAN Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Homo sapiens GN=GOPC PE=1 SV=1
Length = 462
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 50 HHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNF 107
H G+ I GG + PI+I++++PG PA L GD I + + RD +HK+A
Sbjct: 296 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 355
Query: 108 FQSSDTSISLGI 119
I +
Sbjct: 356 LSQQRGEIEFEV 367
>sp|P29074|PTN4_HUMAN Tyrosine-protein phosphatase non-receptor type 4 OS=Homo sapiens
GN=PTPN4 PE=1 SV=1
Length = 926
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA---AAELKRGDIIRKI 91
PH N + +K P+ + +G + GG D P+++++V PGTPA L GD + I
Sbjct: 511 PHDNLVLIRMK-PDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLI 569
Query: 92 GDYDSRDLRHKDATNFFQSS 111
D + H F ++S
Sbjct: 570 NGRDIAEHTHDQVVLFIKAS 589
>sp|Q9Z252|LIN7B_RAT Protein lin-7 homolog B OS=Rattus norvegicus GN=Lin7b PE=1 SV=1
Length = 207
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I++V PG A LKRGD + +
Sbjct: 93 VVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEH 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 153 HEKAVELLKAAQGSVKLVVRYTP 175
>sp|O88951|LIN7B_MOUSE Protein lin-7 homolog B OS=Mus musculus GN=Lin7b PE=1 SV=2
Length = 207
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I++V PG A LKRGD + +
Sbjct: 93 VVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEH 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 153 HEKAVELLKAAQGSVKLVVRYTP 175
>sp|Q9Z250|LIN7A_RAT Protein lin-7 homolog A OS=Rattus norvegicus GN=Lin7a PE=1 SV=2
Length = 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA--AELKRGDIIRKIGDYDSRDLR 100
V++ P G + GG + +SPI I+++ PG A LKRGD + +
Sbjct: 108 VVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEH 167
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 168 HEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q8JZS0|LIN7A_MOUSE Protein lin-7 homolog A OS=Mus musculus GN=Lin7a PE=1 SV=2
Length = 233
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA--AELKRGDIIRKIGDYDSRDLR 100
V++ P G + GG + +SPI I+++ PG A LKRGD + +
Sbjct: 108 VVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEH 167
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 168 HEKAVELLKAAKDSVKLVVRYTP 190
>sp|O14910|LIN7A_HUMAN Protein lin-7 homolog A OS=Homo sapiens GN=LIN7A PE=1 SV=2
Length = 233
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA--AELKRGDIIRKIGDYDSRDLR 100
V++ P G + GG + +SPI I+++ PG A LKRGD + +
Sbjct: 108 VVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEH 167
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 168 HEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q32LM6|LIN7A_BOVIN Protein lin-7 homolog A OS=Bos taurus GN=LIN7A PE=2 SV=1
Length = 233
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAA--AELKRGDIIRKIGDYDSRDLR 100
V++ P G + GG + +SPI I+++ PG A LKRGD + +
Sbjct: 108 VVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEH 167
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ S+ L ++ P
Sbjct: 168 HEKAVELLKAAKDSVKLVVRYTP 190
>sp|Q5RD32|GOPC_PONAB Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Pongo abelii GN=GOPC PE=2 SV=1
Length = 462
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 50 HHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNF 107
H G+ I GG + PI+I++++PG PA L GD I + + RD +HK+A
Sbjct: 296 HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVDGVNLRDTKHKEAVTV 355
Query: 108 FQSSDTSISLGI 119
I +
Sbjct: 356 LSQQRGEIEFEV 367
>sp|Q792I0|LIN7C_RAT Protein lin-7 homolog C OS=Rattus norvegicus GN=Lin7c PE=1 SV=1
Length = 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I+++ PG A LKRGD + +
Sbjct: 93 VVELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEH 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ + L ++ P
Sbjct: 153 HEKAVELLKAAQGKVKLVVRYTP 175
>sp|Q5RAA5|LIN7C_PONAB Protein lin-7 homolog C OS=Pongo abelii GN=LIN7C PE=2 SV=1
Length = 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 43 VIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLR 100
V++ P G I GG + +SPI I+++ PG A LKRGD + +
Sbjct: 93 VVELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEH 152
Query: 101 HKDATNFFQSSDTSISLGIQRNP 123
H+ A +++ + L ++ P
Sbjct: 153 HEKAVELLKAAQGKVKLVVRYTP 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,545,118
Number of Sequences: 539616
Number of extensions: 3032620
Number of successful extensions: 5538
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 5429
Number of HSP's gapped (non-prelim): 197
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)