Query psy12310
Match_columns 201
No_of_seqs 230 out of 1741
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 15:49:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2uzc_A Human pdlim5, PDZ and L 99.7 1.5E-16 5.1E-21 112.1 10.6 84 38-124 3-87 (88)
2 1rgw_A ZAsp protein; PDZ, cyph 99.7 1.1E-16 3.6E-21 112.0 9.6 82 39-123 2-84 (85)
3 2q3g_A PDZ and LIM domain prot 99.7 1.3E-16 4.6E-21 112.6 9.6 84 38-124 3-87 (89)
4 1qav_A Alpha-1 syntrophin (res 99.7 2.2E-16 7.7E-21 111.7 10.1 84 38-122 4-89 (90)
5 2iwo_A Multiple PDZ domain pro 99.7 1.2E-16 4E-21 119.8 8.7 89 36-125 22-115 (120)
6 2vwr_A Ligand of NUMB protein 99.7 5E-16 1.7E-20 111.0 11.2 87 38-125 3-91 (95)
7 2pa1_A PDZ and LIM domain prot 99.7 3.5E-16 1.2E-20 110.0 10.2 83 41-124 3-86 (87)
8 2eeg_A PDZ and LIM domain prot 99.7 3E-16 1E-20 112.1 9.7 84 38-124 8-92 (94)
9 4e34_A Golgi-associated PDZ an 99.7 2.7E-16 9.4E-21 110.5 9.4 83 38-121 2-86 (87)
10 1n7e_A AMPA receptor interacti 99.7 1.1E-15 3.6E-20 109.7 12.6 87 37-125 4-92 (97)
11 1uep_A Membrane associated gua 99.7 2.5E-16 8.6E-21 114.4 9.4 89 35-125 6-98 (103)
12 1r6j_A Syntenin 1; PDZ, membra 99.7 3.2E-16 1.1E-20 110.3 9.3 76 38-121 4-80 (82)
13 1m5z_A GRIP, AMPA receptor int 99.7 1.2E-15 4.1E-20 108.0 12.5 85 37-122 5-90 (91)
14 1ueq_A Membrane associated gua 99.7 3.3E-15 1.1E-19 112.0 15.3 92 32-125 13-108 (123)
15 2jik_A Synaptojanin-2 binding 99.7 7.7E-16 2.6E-20 111.2 11.3 88 35-124 4-98 (101)
16 1ihj_A INAD; intermolecular di 99.7 5.9E-16 2E-20 111.1 10.6 85 38-123 5-97 (98)
17 1i16_A Interleukin 16, LCF; cy 99.7 5.8E-16 2E-20 117.3 11.1 87 36-124 27-119 (130)
18 2i1n_A Discs, large homolog 3; 99.7 7.8E-16 2.7E-20 111.3 11.2 86 38-125 4-96 (102)
19 2awx_A Synapse associated prot 99.7 9.9E-16 3.4E-20 111.5 11.6 86 38-125 3-95 (105)
20 2fe5_A Presynaptic protein SAP 99.7 1.4E-15 4.6E-20 108.3 12.0 84 38-123 3-93 (94)
21 1wf7_A Enigma homologue protei 99.7 3E-16 1E-20 113.9 8.8 86 37-125 4-90 (103)
22 3nfk_A Tyrosine-protein phosph 99.7 3.8E-16 1.3E-20 113.9 9.1 88 34-122 13-107 (107)
23 2cs5_A Tyrosine-protein phosph 99.7 3.7E-16 1.3E-20 116.2 9.2 93 32-125 9-108 (119)
24 2dc2_A GOPC, golgi associated 99.7 5.3E-16 1.8E-20 112.9 9.5 87 38-125 9-97 (103)
25 2pkt_A PDZ and LIM domain prot 99.7 8E-16 2.7E-20 109.0 10.2 85 38-125 3-88 (91)
26 1ujd_A KIAA0559 protein; PDZ d 99.7 1.1E-15 3.8E-20 113.6 11.4 96 30-125 4-111 (117)
27 2qg1_A Multiple PDZ domain pro 99.6 1.3E-15 4.3E-20 108.1 11.1 84 38-123 4-89 (92)
28 1uhp_A Hypothetical protein KI 99.6 1.6E-15 5.4E-20 110.8 11.9 87 36-124 6-102 (107)
29 2csj_A TJP2 protein; PDZ domai 99.6 4.5E-16 1.5E-20 115.6 9.1 87 38-125 14-106 (117)
30 2ego_A General receptor for ph 99.6 9.9E-16 3.4E-20 109.8 10.5 84 38-122 4-95 (96)
31 2he4_A Na(+)/H(+) exchange reg 99.6 1.8E-15 6.1E-20 107.0 11.6 84 38-124 4-88 (90)
32 3b76_A E3 ubiquitin-protein li 99.6 1.2E-15 4E-20 114.1 11.2 86 37-123 23-113 (118)
33 1wha_A KIAA0147 protein, scrib 99.6 1.2E-15 4.3E-20 111.0 11.0 88 36-125 5-100 (105)
34 2q9v_A Membrane-associated gua 99.6 6.4E-16 2.2E-20 109.2 9.2 84 38-123 2-89 (90)
35 3cbz_A Dishevelled-2; PDZ doma 99.6 4.2E-16 1.4E-20 114.4 8.3 88 37-125 4-98 (108)
36 1d5g_A Human phosphatase HPTP1 99.6 2.7E-15 9.3E-20 107.2 12.4 86 37-124 4-94 (96)
37 2opg_A Multiple PDZ domain pro 99.6 2.5E-15 8.6E-20 107.8 12.2 87 37-125 3-92 (98)
38 1x5q_A LAP4 protein; PDZ domai 99.6 4.5E-15 1.6E-19 108.8 13.7 92 32-125 9-107 (110)
39 2dkr_A LIN-7 homolog B; LIN-7B 99.6 1E-15 3.5E-20 108.7 9.9 85 38-124 5-91 (93)
40 2ehr_A INAD-like protein; PDZ 99.6 1.4E-15 4.9E-20 112.8 10.9 90 34-124 11-111 (117)
41 2r4h_A Membrane-associated gua 99.6 1.3E-15 4.5E-20 112.4 10.5 86 36-123 22-109 (112)
42 2jil_A GRIP1 protein, glutamat 99.6 1.4E-15 4.8E-20 108.9 10.2 86 38-125 3-94 (97)
43 2fne_A Multiple PDZ domain pro 99.6 5.9E-16 2E-20 115.4 8.5 88 35-124 22-114 (117)
44 4amh_A Disks large homolog 1; 99.6 1.2E-15 4E-20 111.7 9.9 77 49-125 11-94 (106)
45 2edp_A Fragment, shroom family 99.6 6.7E-16 2.3E-20 111.7 8.5 84 40-125 11-96 (100)
46 2dmz_A INAD-like protein; PDZ 99.6 2.9E-15 1E-19 112.9 12.3 90 35-125 12-108 (129)
47 2i04_A Membrane-associated gua 99.6 2.2E-15 7.4E-20 105.4 10.7 80 40-121 2-85 (85)
48 2djt_A Unnamed protein product 99.6 1.8E-15 6.2E-20 109.8 10.5 86 38-125 11-100 (104)
49 2h2b_A Tight junction protein 99.6 5.1E-15 1.7E-19 107.9 12.8 87 38-125 7-99 (107)
50 2w4f_A Protein LAP4; structura 99.6 3.3E-15 1.1E-19 106.8 11.3 86 38-125 3-95 (97)
51 1v62_A KIAA1719 protein; struc 99.6 3.5E-15 1.2E-19 111.0 11.7 91 34-125 11-104 (117)
52 1wi4_A Synip, syntaxin binding 99.6 2.6E-15 9E-20 110.5 10.9 87 35-124 12-106 (109)
53 3hpk_A Protein interacting wit 99.6 2.8E-15 9.5E-20 112.5 11.2 86 38-124 19-106 (125)
54 2v90_A PDZ domain-containing p 99.6 2.8E-15 9.7E-20 107.2 10.7 86 38-125 3-91 (96)
55 1v5l_A PDZ and LIM domain 3; a 99.6 3.8E-16 1.3E-20 113.5 6.2 92 38-132 5-97 (103)
56 3l4f_D SH3 and multiple ankyri 99.6 2.2E-15 7.4E-20 114.7 10.6 86 38-124 27-125 (132)
57 1ufx_A KIAA1526 protein; PDZ d 99.6 1.9E-15 6.4E-20 110.3 9.8 85 39-125 7-99 (103)
58 2jre_A C60-1 PDZ domain peptid 99.6 4.2E-15 1.4E-19 108.5 11.6 90 35-124 9-105 (108)
59 1wf8_A Neurabin-I; PDZ domain, 99.6 3.2E-15 1.1E-19 109.2 10.9 89 35-125 6-102 (107)
60 1wi2_A Riken cDNA 2700099C19; 99.6 3.3E-15 1.1E-19 108.7 10.8 85 38-124 15-100 (104)
61 1q7x_A PDZ2B domain of PTP-BAS 99.6 2.8E-15 9.7E-20 109.5 10.5 89 35-125 6-104 (108)
62 2db5_A INAD-like protein; PDZ 99.6 2E-15 7E-20 113.7 10.0 89 36-125 23-117 (128)
63 2kpk_A Membrane-associated gua 99.6 5.6E-15 1.9E-19 111.7 12.4 92 31-124 11-106 (129)
64 1mfg_A ERB-B2 interacting prot 99.6 5.3E-15 1.8E-19 105.6 11.5 82 38-123 3-93 (95)
65 2byg_A Channel associated prot 99.6 3.5E-15 1.2E-19 111.1 10.4 85 37-123 23-114 (117)
66 2d92_A INAD-like protein; PDZ 99.6 3.4E-15 1.2E-19 109.4 10.1 85 37-123 14-105 (108)
67 1g9o_A NHE-RF; PDZ domain, com 99.6 9E-15 3.1E-19 103.5 12.0 83 38-123 3-86 (91)
68 1wfv_A Membrane associated gua 99.6 6.3E-16 2.2E-20 111.8 6.1 88 38-127 11-100 (103)
69 1uju_A Scribble; PDZ domain, c 99.6 1.1E-15 3.8E-20 112.3 7.3 86 39-125 10-106 (111)
70 2eno_A Synaptojanin-2-binding 99.6 2.6E-15 8.8E-20 111.9 9.1 89 35-125 14-109 (120)
71 1um1_A KIAA1849 protein, RSGI 99.6 7E-15 2.4E-19 107.8 11.3 89 35-125 5-98 (110)
72 1wg6_A Hypothetical protein (r 99.6 1.8E-15 6.2E-20 114.2 8.3 87 38-125 25-124 (127)
73 1z87_A Alpha-1-syntrophin; pro 99.6 3.8E-15 1.3E-19 125.8 11.1 88 37-125 76-165 (263)
74 2eeh_A PDZ domain-containing p 99.6 9.7E-15 3.3E-19 105.3 11.5 88 36-125 8-96 (100)
75 1uew_A Membrane associated gua 99.6 6.3E-15 2.2E-19 108.8 10.7 87 38-125 10-105 (114)
76 3i4w_A Disks large homolog 4; 99.6 9.5E-15 3.2E-19 105.7 11.3 83 38-123 11-95 (104)
77 3axa_A Afadin, nectin-3, prote 99.6 7.5E-15 2.6E-19 106.9 10.8 87 36-125 9-100 (106)
78 2daz_A INAD-like protein; PDZ 99.6 4.9E-15 1.7E-19 111.1 9.8 88 36-125 23-113 (124)
79 1x6d_A Interleukin-16; PDZ dom 99.6 1.9E-14 6.4E-19 107.0 12.6 90 35-125 12-105 (119)
80 1vb7_A PDZ and LIM domain 2; P 99.6 1.7E-15 5.8E-20 108.2 6.5 77 49-125 14-91 (94)
81 2vsp_A PDZ domain-containing p 99.6 2.3E-15 8E-20 106.7 7.2 85 38-125 3-88 (91)
82 2d90_A PDZ domain containing p 99.6 8.7E-15 3E-19 105.8 9.8 86 37-125 5-91 (102)
83 3qe1_A Sorting nexin-27, G pro 99.6 1.3E-14 4.5E-19 105.7 10.8 86 37-124 5-103 (107)
84 1n7t_A 99-MER peptide of densi 99.6 9.7E-15 3.3E-19 105.8 10.0 84 36-123 9-101 (103)
85 1q3o_A Shank1; PDZ, GKAP, pept 99.6 1.4E-14 4.7E-19 106.1 10.8 86 38-124 7-105 (109)
86 2o2t_A Multiple PDZ domain pro 99.6 4E-15 1.4E-19 110.2 7.9 88 37-125 19-112 (117)
87 2dlu_A INAD-like protein; PDZ 99.6 2.9E-14 1E-18 104.6 12.2 86 36-125 13-100 (111)
88 1nf3_C PAR-6B; semi-CRIB motif 99.6 8.1E-15 2.8E-19 110.6 9.4 88 37-124 28-126 (128)
89 2f5y_A Regulator of G-protein 99.6 2.2E-14 7.5E-19 101.7 11.1 82 38-125 3-85 (91)
90 1v5q_A GRIP1 homolog, glutamat 99.6 2.3E-14 8E-19 107.1 11.8 91 34-125 11-109 (122)
91 3o46_A Maguk P55 subfamily mem 99.6 1.5E-14 5.2E-19 102.9 10.2 84 38-124 4-89 (93)
92 2dm8_A INAD-like protein; PDZ 99.6 1.4E-14 4.9E-19 106.9 10.2 86 38-125 17-105 (116)
93 2g5m_B Neurabin-2; spinophilin 99.6 1E-14 3.6E-19 107.3 9.4 87 37-125 3-97 (113)
94 3egg_C Spinophilin; PP1, serin 99.6 1.1E-14 3.9E-19 115.4 10.3 85 36-122 78-170 (170)
95 3r68_A Na(+)/H(+) exchange reg 99.6 1.3E-14 4.6E-19 103.2 9.5 83 39-124 6-89 (95)
96 2edv_A FERM and PDZ domain-con 99.6 5.8E-15 2E-19 106.0 7.6 83 38-124 8-90 (96)
97 1kwa_A Hcask/LIN-2 protein; PD 99.6 1E-14 3.5E-19 103.2 8.8 83 39-124 2-86 (88)
98 1va8_A Maguk P55 subfamily mem 99.6 2.6E-14 9E-19 105.5 11.3 86 36-125 23-110 (113)
99 1wfg_A Regulating synaptic mem 99.6 2.2E-14 7.5E-19 108.9 10.2 87 38-124 27-128 (131)
100 2la8_A Inactivation-NO-after-p 99.6 2.5E-14 8.5E-19 104.8 10.1 86 38-127 2-89 (106)
101 3ngh_A PDZ domain-containing p 99.6 1.9E-14 6.4E-19 104.7 9.4 83 40-124 3-86 (106)
102 3k1r_A Harmonin; protein-prote 99.6 2.2E-14 7.6E-19 115.2 10.6 86 37-124 83-169 (192)
103 3khf_A Microtubule-associated 99.5 1.3E-14 4.6E-19 104.2 8.1 83 41-125 5-95 (99)
104 1uez_A KIAA1526 protein; PDZ d 99.5 1.4E-14 4.8E-19 104.6 8.2 87 38-125 8-95 (101)
105 2koj_A Partitioning defective 99.5 1.1E-13 3.8E-18 101.3 13.1 88 36-125 9-103 (111)
106 3soe_A Membrane-associated gua 99.5 4.8E-14 1.6E-18 104.8 11.1 82 37-125 11-95 (113)
107 2dls_A PDZ-rhogef, RHO guanine 99.5 1.1E-13 3.7E-18 98.6 12.6 81 38-125 8-89 (93)
108 2iwn_A Multiple PDZ domain pro 99.5 4.3E-14 1.5E-18 100.6 10.4 85 38-124 4-94 (97)
109 2fcf_A Multiple PDZ domain pro 99.5 5.3E-14 1.8E-18 101.7 11.1 87 38-125 4-101 (103)
110 2eei_A PDZ domain-containing p 99.5 1.7E-14 5.8E-19 104.9 8.4 86 37-125 7-93 (106)
111 3bpu_A Membrane-associated gua 99.5 5.4E-14 1.8E-18 98.9 10.6 83 38-124 3-87 (88)
112 2qkv_A Inactivation-NO-after-p 99.5 8.6E-14 2.9E-18 99.8 11.6 83 37-123 7-91 (96)
113 3sfj_A TAX1-binding protein 3; 99.5 5.1E-14 1.7E-18 101.9 10.4 74 49-122 17-104 (104)
114 2kv8_A RGS12, regulator of G-p 99.5 1.5E-14 5.2E-19 100.7 7.1 80 38-123 2-82 (83)
115 3gsl_A Disks large homolog 4; 99.5 6E-14 2.1E-18 111.3 11.5 86 38-125 5-97 (196)
116 2kom_A Partitioning defective 99.5 1.3E-13 4.5E-18 103.0 12.7 92 30-123 22-120 (121)
117 1tp5_A Presynaptic density pro 99.5 7.6E-14 2.6E-18 103.5 10.8 84 38-124 14-99 (119)
118 2gzv_A PRKCA-binding protein; 99.5 1.2E-13 4E-18 102.4 11.2 85 38-123 24-110 (114)
119 1um7_A Synapse-associated prot 99.5 3.4E-14 1.2E-18 104.2 8.0 89 33-124 10-100 (113)
120 1whd_A RGS3, regulator of G-pr 99.5 4.7E-14 1.6E-18 101.9 8.3 89 30-124 7-96 (100)
121 3gge_A PDZ domain-containing p 99.5 1.6E-13 5.5E-18 98.9 11.0 85 36-124 3-91 (95)
122 3e17_A Tight junction protein 99.5 7.3E-14 2.5E-18 98.7 9.1 78 40-123 2-81 (88)
123 2vz5_A TAX1-binding protein 3; 99.5 1.5E-13 5.3E-18 105.3 11.5 90 36-125 21-126 (139)
124 1uit_A Human discs large 5 pro 99.5 3.9E-13 1.3E-17 99.5 13.2 84 38-125 19-103 (117)
125 2yt7_A Amyloid beta A4 precurs 99.5 2.1E-13 7.3E-18 98.6 11.3 87 36-123 7-99 (101)
126 1y7n_A Amyloid beta A4 precurs 99.5 1.4E-13 4.7E-18 98.0 10.0 80 36-122 9-89 (90)
127 1v6b_A Harmonin isoform A1; st 99.5 9.2E-14 3.2E-18 103.4 9.4 84 39-125 19-109 (118)
128 1x5n_A Harmonin; PDZ domain, u 99.5 1.9E-13 6.6E-18 100.6 11.0 85 38-124 15-101 (114)
129 2qt5_A Glutamate receptor-inte 99.5 2.2E-13 7.4E-18 109.4 11.9 87 37-124 6-94 (200)
130 2ejy_A 55 kDa erythrocyte memb 99.5 1E-13 3.5E-18 100.3 8.8 81 39-122 13-95 (97)
131 2edz_A PDZ domain-containing p 99.5 6E-14 2E-18 103.6 7.5 86 38-125 13-99 (114)
132 2iwq_A Multiple PDZ domain pro 99.5 2E-13 6.8E-18 102.5 10.4 86 38-124 24-120 (123)
133 2jxo_A Ezrin-radixin-moesin-bi 99.5 7.9E-14 2.7E-18 100.0 7.8 82 39-123 10-93 (98)
134 1qau_A Neuronal nitric oxide s 99.5 2.9E-13 9.9E-18 99.3 10.6 85 39-125 2-89 (112)
135 3r0h_A INAD, inactivation-NO-a 99.5 3.7E-13 1.3E-17 108.2 12.1 88 37-126 17-111 (206)
136 2lob_A Golgi-associated PDZ an 99.2 3.9E-15 1.3E-19 110.2 0.0 83 38-121 27-111 (112)
137 2e7k_A Maguk P55 subfamily mem 99.5 1.4E-13 4.7E-18 97.9 8.0 81 38-123 6-88 (91)
138 2qbw_A PDZ-fibronectin fusion 99.5 2.3E-13 7.9E-18 108.6 10.2 74 51-125 2-87 (195)
139 1uf1_A KIAA1526 protein; PDZ d 99.5 1.1E-12 3.8E-17 98.6 13.2 86 38-125 20-106 (128)
140 2vsv_A Rhophilin-2; scaffold p 99.5 3.8E-13 1.3E-17 99.2 10.0 80 39-124 24-105 (109)
141 1ujv_A Membrane associated gua 99.5 1E-12 3.6E-17 94.3 11.8 83 37-125 9-93 (96)
142 2z17_A Pleckstrin homology SEC 99.5 2.4E-13 8.3E-18 98.6 8.5 80 39-119 16-103 (104)
143 2yuy_A RHO GTPase activating p 99.5 4.6E-14 1.6E-18 106.1 4.7 85 39-125 9-122 (126)
144 2d8i_A T-cell lymphoma invasio 99.4 6.7E-13 2.3E-17 98.6 10.5 88 35-124 12-102 (114)
145 3cyy_A Tight junction protein 99.4 1.1E-12 3.9E-17 92.5 10.1 82 38-125 2-85 (92)
146 2kjd_A Sodium/hydrogen exchang 99.4 8.2E-13 2.8E-17 99.0 9.5 85 38-125 9-95 (128)
147 1p1d_A PDZ45, glutamate recept 99.4 1.2E-12 4.1E-17 104.9 10.8 89 36-125 4-100 (196)
148 3tsv_A Tight junction protein 99.4 2.3E-12 7.7E-17 96.8 11.1 73 50-124 38-113 (124)
149 1b8q_A Protein (neuronal nitri 99.4 1.2E-12 4.1E-17 98.2 9.5 87 37-125 7-96 (127)
150 3gsl_A Disks large homolog 4; 99.4 3.2E-12 1.1E-16 101.2 11.2 87 37-125 99-192 (196)
151 3kzd_A TIAM-1, T-lymphoma inva 99.4 3.5E-12 1.2E-16 91.7 10.2 82 38-121 6-90 (94)
152 2rcz_A Tight junction protein 99.4 6E-12 2.1E-16 86.4 10.9 76 42-123 4-81 (81)
153 1wif_A RSGI RUH-020, riken cDN 99.4 3.2E-12 1.1E-16 96.6 9.8 80 38-122 27-110 (126)
154 2eaq_A LIM domain only protein 99.3 4.2E-12 1.4E-16 89.4 9.0 82 39-123 4-89 (90)
155 2xkx_A Disks large homolog 4; 99.3 3.9E-12 1.3E-16 120.5 10.3 85 38-124 59-150 (721)
156 3r0h_A INAD, inactivation-NO-a 99.3 1.4E-11 4.7E-16 98.9 11.6 84 38-125 113-198 (206)
157 3shw_A Tight junction protein 99.3 5.1E-12 1.7E-16 114.4 9.5 82 39-125 2-86 (468)
158 3tsz_A Tight junction protein 99.3 8.3E-12 2.8E-16 110.7 10.2 84 37-125 8-94 (391)
159 2yub_A LIMK-2, LIM domain kina 99.3 2.4E-11 8.2E-16 90.6 10.7 88 40-127 14-109 (118)
160 1vae_A Rhophilin 2, rhophilin, 99.3 2.2E-12 7.4E-17 95.3 4.9 80 39-124 16-97 (111)
161 1fc6_A Photosystem II D1 prote 99.3 2.4E-11 8.1E-16 107.3 12.2 141 50-197 84-229 (388)
162 2krg_A Na(+)/H(+) exchange reg 99.3 3.1E-12 1E-16 105.0 5.6 85 37-124 8-94 (216)
163 2qt5_A Glutamate receptor-inte 99.3 2.8E-11 9.6E-16 97.0 10.1 85 38-124 106-196 (200)
164 1wh1_A KIAA1095 protein; PDZ d 99.2 2.8E-11 9.4E-16 90.5 9.1 87 37-125 18-109 (124)
165 1w9e_A Syntenin 1; cell adhesi 99.2 6.3E-11 2.2E-15 92.5 10.7 81 38-122 4-86 (166)
166 3k50_A Putative S41 protease; 99.2 1.8E-11 6.2E-16 109.0 8.0 136 51-198 74-225 (403)
167 3qik_A Phosphatidylinositol 3, 99.2 7.6E-11 2.6E-15 85.7 9.3 77 40-121 19-99 (101)
168 1p1d_A PDZ45, glutamate recept 99.1 1.6E-10 5.4E-15 92.5 9.6 85 38-123 107-195 (196)
169 2xkx_A Disks large homolog 4; 99.1 3.2E-10 1.1E-14 107.4 11.1 84 38-124 307-392 (721)
170 3suz_A Amyloid beta A4 precurs 99.1 1.6E-10 5.4E-15 102.3 6.5 87 38-125 204-296 (388)
171 2l97_A HTRA, putative serine p 98.8 1.9E-08 6.4E-13 76.2 8.0 60 64-125 56-117 (134)
172 3i18_A LMO2051 protein; alpha- 98.8 1.5E-08 5.2E-13 72.8 7.0 60 64-125 6-67 (100)
173 3rle_A Golgi reassembly-stacki 98.8 9.2E-09 3.2E-13 83.3 6.5 74 53-126 4-79 (209)
174 2kjp_A Uncharacterized protein 98.8 2.5E-09 8.7E-14 75.9 2.7 57 66-125 2-61 (91)
175 2i6v_A General secretion pathw 98.8 9.6E-09 3.3E-13 71.9 5.3 57 66-124 20-79 (87)
176 3id1_A Regulator of sigma E pr 98.8 1.7E-08 5.9E-13 72.0 6.7 56 67-124 4-62 (95)
177 2pzd_A Serine protease HTRA2; 98.7 2.3E-08 7.9E-13 73.0 7.4 59 64-125 34-93 (113)
178 2zpm_A Regulator of sigma E pr 98.7 1.3E-08 4.5E-13 71.3 5.7 59 65-125 4-64 (91)
179 2kl1_A YLBL protein; structure 98.7 1.2E-08 4E-13 72.7 5.2 59 64-125 4-65 (94)
180 3suz_A Amyloid beta A4 precurs 98.7 2.2E-09 7.5E-14 94.9 0.1 74 42-122 299-373 (388)
181 2i4s_A General secretion pathw 98.7 6.3E-08 2.2E-12 70.1 7.7 57 66-124 38-97 (105)
182 1w9e_A Syntenin 1; cell adhesi 98.6 1.6E-07 5.4E-12 73.0 9.7 74 39-120 89-163 (166)
183 2p3w_A Probable serine proteas 98.6 7.4E-08 2.5E-12 70.2 6.8 59 64-125 34-93 (112)
184 1y8t_A Hypothetical protein RV 98.6 8.6E-08 2.9E-12 82.2 7.9 60 64-125 241-304 (324)
185 1te0_A Protease DEGS; two doma 98.6 1.3E-07 4.3E-12 81.1 8.6 60 64-125 243-305 (318)
186 3stj_A Protease DEGQ; serine p 98.6 4.3E-08 1.5E-12 85.3 5.4 59 65-125 263-324 (345)
187 2hga_A Conserved protein MTH13 98.5 1.7E-07 5.8E-12 70.3 6.0 57 64-124 24-83 (125)
188 4a8c_A Periplasmic PH-dependen 98.5 2.1E-07 7.3E-12 83.2 7.6 61 65-125 263-324 (436)
189 3pv2_A DEGQ; trypsin fold, PDZ 98.4 2.9E-07 1E-11 82.8 7.0 61 65-125 282-343 (451)
190 4a8c_A Periplasmic PH-dependen 98.4 8.6E-07 2.9E-11 79.3 10.0 59 65-125 363-422 (436)
191 4fgm_A Aminopeptidase N family 98.4 3.8E-07 1.3E-11 84.8 7.7 69 51-125 485-556 (597)
192 1k32_A Tricorn protease; prote 98.3 3.1E-07 1.1E-11 89.0 5.3 69 50-124 736-816 (1045)
193 3rle_A Golgi reassembly-stacki 98.3 2.9E-06 9.8E-11 68.5 9.6 72 51-125 95-172 (209)
194 1lcy_A HTRA2 serine protease; 98.3 1.5E-06 5.2E-11 74.7 8.0 58 65-125 256-314 (325)
195 3qo6_A Protease DO-like 1, chl 98.3 4.9E-07 1.7E-11 78.5 4.8 59 65-125 251-323 (348)
196 3pv2_A DEGQ; trypsin fold, PDZ 98.3 1.1E-06 3.6E-11 79.1 6.4 58 66-125 387-445 (451)
197 3num_A Serine protease HTRA1; 98.2 2.6E-07 8.8E-12 79.6 0.0 59 64-125 253-312 (332)
198 1ky9_A Protease DO, DEGP, HTRA 98.1 9.4E-07 3.2E-11 79.4 2.1 59 65-125 286-347 (448)
199 4fln_A Protease DO-like 2, chl 98.0 1.3E-05 4.4E-10 73.7 7.3 63 64-126 276-348 (539)
200 1ky9_A Protease DO, DEGP, HTRA 97.9 1.4E-06 4.7E-11 78.3 0.0 59 65-125 383-442 (448)
201 4fln_A Protease DO-like 2, chl 96.5 0.0051 1.7E-07 56.4 7.1 53 65-119 415-469 (539)
202 2pk8_A Uncharacterized protein 33.5 25 0.00084 24.6 2.3 17 184-200 21-37 (103)
203 3dor_A Protein CT_858, CPAF; m 30.9 64 0.0022 29.6 5.2 30 66-98 97-126 (583)
No 1
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.69 E-value=1.5e-16 Score=112.06 Aligned_cols=84 Identities=25% Similarity=0.559 Sum_probs=75.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|+|.. ..+|||++.+|.+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 3 ~~~~v~l~~---~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (88)
T 2uzc_A 3 SNYSVSLVG---PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLN 79 (88)
T ss_dssp CEEEEEEES---SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred cEEEEEEcC---CCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 467888843 37899999999987788999999999999 89999999999999999999999999999988889999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|++.
T Consensus 80 l~v~R~g~ 87 (88)
T 2uzc_A 80 MTLQRESD 87 (88)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998763
No 2
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.69 E-value=1.1e-16 Score=112.03 Aligned_cols=82 Identities=28% Similarity=0.647 Sum_probs=74.0
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
+++|+|.+ ..+|||++.+|.+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.|
T Consensus 2 ~~~v~l~~---~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 78 (85)
T 1rgw_A 2 AYSVTLTG---PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSL 78 (85)
T ss_dssp EEEEEECC---SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEE
T ss_pred cEEEEEeC---CCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEE
Confidence 46788864 36899999999987789999999999999 899999999999999999999999999888888888999
Q ss_pred EEEeCC
Q psy12310 118 GIQRNP 123 (201)
Q Consensus 118 ~v~R~~ 123 (201)
+|.|++
T Consensus 79 ~v~R~~ 84 (85)
T 1rgw_A 79 TLQKSK 84 (85)
T ss_dssp EEESCC
T ss_pred EEEeCC
Confidence 999875
No 3
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=112.65 Aligned_cols=84 Identities=31% Similarity=0.607 Sum_probs=75.7
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|++.+ ..+|||++.+|.+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 3 ~~~~v~~~~---~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (89)
T 2q3g_A 3 DSFKVVLEG---PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLS 79 (89)
T ss_dssp EEEEEEEES---SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEE
T ss_pred cEEEEEEcC---CCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 467788874 37799999999987778999999999999 89999999999999999999999999999988889999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|++.
T Consensus 80 l~v~R~~~ 87 (89)
T 2q3g_A 80 LGLSRAIT 87 (89)
T ss_dssp EEEEEECC
T ss_pred EEEEeCCC
Confidence 99999764
No 4
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.68 E-value=2.2e-16 Score=111.71 Aligned_cols=84 Identities=23% Similarity=0.406 Sum_probs=76.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|+|.|. ...+|||++.+|.+...+++|..|.++||| .+ ||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 4 ~~~~v~l~k~-~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 4 QRRRVTVRKA-DAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SCEEEEEECC-TTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred ccEEEEEEeC-CCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4678999986 457899999999877778999999999999 87 99999999999999999999999999999888999
Q ss_pred EEEEEeC
Q psy12310 116 SLGIQRN 122 (201)
Q Consensus 116 ~L~v~R~ 122 (201)
.|+|.|-
T Consensus 83 ~l~v~r~ 89 (90)
T 1qav_A 83 VLEVKYM 89 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999874
No 5
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.68 E-value=1.2e-16 Score=119.78 Aligned_cols=89 Identities=28% Similarity=0.390 Sum_probs=74.7
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
..+.++|+|.|. ...+|||+|.+|.+. ..+++|..|.++||| .+ ||++||+|++|||.++.++++.+++.+++.
T Consensus 22 ~~~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 100 (120)
T 2iwo_A 22 SMGLRTVEMKKG-PTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN 100 (120)
T ss_dssp ---CEEEEEEC-----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCcEEEEEEcC-CCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345778999986 346899999998762 457999999999999 77 999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..|.|+|.|++..
T Consensus 101 ~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 101 ASGSIEMQVVAGGDV 115 (120)
T ss_dssp CCSEEEEEEECCTTS
T ss_pred CCCeEEEEEEECCcc
Confidence 988999999998754
No 6
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.67 E-value=5e-16 Score=110.96 Aligned_cols=87 Identities=18% Similarity=0.261 Sum_probs=78.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|+|.|.+...+|||++.++.+ ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++..++..+..+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 81 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERV 81 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 5788999986556789999998876 568999999999999 899 9999999999999999999999998888889999
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|.+..
T Consensus 82 ~l~v~R~~~~ 91 (95)
T 2vwr_A 82 NLTIARPGKP 91 (95)
T ss_dssp EEEEEEESCS
T ss_pred EEEEEcCCcC
Confidence 9999997753
No 7
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.67 E-value=3.5e-16 Score=110.00 Aligned_cols=83 Identities=30% Similarity=0.539 Sum_probs=72.8
Q ss_pred EEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Q psy12310 41 TVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGI 119 (201)
Q Consensus 41 ~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v 119 (201)
++++.+. +..+|||++.+|.+...+++|..|.++||| ++||++||+|++|||.++.++++.++..+++.....+.|+|
T Consensus 3 ~~~v~~~-~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (87)
T 2pa1_A 3 ALTVDVA-GPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQL 81 (87)
T ss_dssp EEEEEEC-SSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEE
T ss_pred EEEEEEC-CCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 3444433 457899999999987778999999999999 99999999999999999999999999999988778999999
Q ss_pred EeCCC
Q psy12310 120 QRNPP 124 (201)
Q Consensus 120 ~R~~~ 124 (201)
.|++.
T Consensus 82 ~R~~~ 86 (87)
T 2pa1_A 82 DRITS 86 (87)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99863
No 8
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=3e-16 Score=112.14 Aligned_cols=84 Identities=29% Similarity=0.601 Sum_probs=75.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|+|.++ .+|||++.+|.+...+++|..|.++||| ++||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 8 ~~~~v~l~~~---~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 84 (94)
T 2eeg_A 8 MPHSVTLRGP---SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLT 84 (94)
T ss_dssp CCEEEEECCS---SCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEE
T ss_pred ceEEEEEeCC---CccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4567888643 6899999999988889999999999999 89999999999999999999999999988888888999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|++.
T Consensus 85 l~v~R~g~ 92 (94)
T 2eeg_A 85 LSVSSGPS 92 (94)
T ss_dssp EEEECCSS
T ss_pred EEEEeCCC
Confidence 99999764
No 9
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.67 E-value=2.7e-16 Score=110.48 Aligned_cols=83 Identities=28% Similarity=0.515 Sum_probs=74.9
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|+|.|. ...+|||++.+|.+...+++|..|.++||| . +||++||+|++|||.++.++++.+++.+++.++..+
T Consensus 2 ~~~~v~l~~~-~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 80 (87)
T 4e34_A 2 PIRKVLLLKE-DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 80 (87)
T ss_dssp CCEEEEEECC-TTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CEEEEEEEEC-CCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3568999886 467899999999877778999999999999 7 799999999999999999999999999999888899
Q ss_pred EEEEEe
Q psy12310 116 SLGIQR 121 (201)
Q Consensus 116 ~L~v~R 121 (201)
.|+|++
T Consensus 81 ~l~v~~ 86 (87)
T 4e34_A 81 EFEVVY 86 (87)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
No 10
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.67 E-value=1.1e-15 Score=109.75 Aligned_cols=87 Identities=23% Similarity=0.339 Sum_probs=77.6
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
...++|+|.+. ..+|||.+.++.+...+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..+..
T Consensus 4 ~~~~~v~l~~~--~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 81 (97)
T 1n7e_A 4 AIIYTVELKRY--GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGET 81 (97)
T ss_dssp CCEEEEEEECT--TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred ceEEEEEEEeC--CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 35778999875 46799999998776678999999999999 899 999999999999999999999999999877899
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
+.|+|.|++..
T Consensus 82 v~l~v~R~~~~ 92 (97)
T 1n7e_A 82 VTLKIKKQTDA 92 (97)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEEeCCCC
Confidence 99999998754
No 11
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=2.5e-16 Score=114.45 Aligned_cols=89 Identities=20% Similarity=0.348 Sum_probs=79.1
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC-
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS- 111 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~- 111 (201)
+..+.++|+|.|. ..+|||.+.+|.+...+++|..|.++||| ++| |++||+|++|||.++.++++.+++.+++..
T Consensus 6 ~~~~~~~v~l~~~--~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 6 SGYKELDVHLRRM--ESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp SSEEEECCEEESS--SSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CCceEEEEEEEeC--CCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4446778899985 47799999999887789999999999999 899 999999999999999999999999999876
Q ss_pred -CCeEEEEEEeCCCC
Q psy12310 112 -DTSISLGIQRNPPG 125 (201)
Q Consensus 112 -g~~v~L~v~R~~~~ 125 (201)
+..|.|+|.|.+..
T Consensus 84 ~g~~v~l~v~R~~~~ 98 (103)
T 1uep_A 84 RNGQVNLTVRRKVLS 98 (103)
T ss_dssp HHTEEEEEEEEECCC
T ss_pred CCCcEEEEEEeCCCC
Confidence 79999999998653
No 12
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.67 E-value=3.2e-16 Score=110.33 Aligned_cols=76 Identities=17% Similarity=0.256 Sum_probs=68.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|+|.|+ ...+|||++.+| +|.+|.++||| ++||++||+|++|||+++.+++|++++.+|+.+++.|+
T Consensus 4 ~~r~v~l~k~-~~g~~Gf~i~~g-------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 4 DPRTITMHKD-STGHVGFIFKNG-------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCEEEEEECC-TTSCCCEEEETT-------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred ceEEEEEEEC-CCCCeEEEEECC-------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 4578999986 456799999875 38999999999 89999999999999999999999999999998899999
Q ss_pred EEEEe
Q psy12310 117 LGIQR 121 (201)
Q Consensus 117 L~v~R 121 (201)
|+|..
T Consensus 76 L~v~p 80 (82)
T 1r6j_A 76 ITIMP 80 (82)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 13
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.67 E-value=1.2e-15 Score=108.01 Aligned_cols=85 Identities=19% Similarity=0.315 Sum_probs=75.9
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
.+.++|+|.|.....+|||++.+|.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 83 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLL-EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKL 83 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTT-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEE
T ss_pred cceEEEEEEECCCCCCccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 36788999987544689999999876 468999999999999 8999999999999999999999999888888888999
Q ss_pred EEEEEeC
Q psy12310 116 SLGIQRN 122 (201)
Q Consensus 116 ~L~v~R~ 122 (201)
.|+|.|+
T Consensus 84 ~l~v~R~ 90 (91)
T 1m5z_A 84 DLVISRN 90 (91)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999985
No 14
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=3.3e-15 Score=111.99 Aligned_cols=92 Identities=26% Similarity=0.412 Sum_probs=80.9
Q ss_pred CCCCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 32 PAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 32 ~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
+.....+.++|+|.|. ..+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||+++.++++.+++.+++
T Consensus 13 ~~~~~~~~~~v~l~~~--~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 13 ASQLKGTFLSTTLKKS--NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp STTCCSEEEEEEEECC--TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cccCCCcEEEEEEEeC--CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4445567889999985 46899999999887788999999999999 899 9999999999999999999999999998
Q ss_pred C--CCCeEEEEEEeCCCC
Q psy12310 110 S--SDTSISLGIQRNPPG 125 (201)
Q Consensus 110 ~--~g~~v~L~v~R~~~~ 125 (201)
. .+..|.|+|.|....
T Consensus 91 ~~~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 91 SVPIGQSVNLVLCRGYPL 108 (123)
T ss_dssp TSCTTCEEEEEEEESCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 7 478999999998643
No 15
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.66 E-value=7.7e-16 Score=111.17 Aligned_cols=88 Identities=26% Similarity=0.414 Sum_probs=78.0
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
+....+.|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+
T Consensus 4 ~~~~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 81 (101)
T 2jik_A 4 YLVTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 81 (101)
T ss_dssp GGEEEEEEEEECCT--TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred CCCccEEEEEEeCC--CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 33467789999864 7899999999874 368999999999999 899 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeCCC
Q psy12310 108 FQSSDTSISLGIQRNPP 124 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~ 124 (201)
++..+..+.|+|.|.+.
T Consensus 82 ~~~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 82 FRNAGYAVSLRVQHRLE 98 (101)
T ss_dssp HHTCCSEEEEEEEEESC
T ss_pred HHhCCCeEEEEEEeCCC
Confidence 98888999999999764
No 16
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.66 E-value=5.9e-16 Score=111.10 Aligned_cols=85 Identities=28% Similarity=0.391 Sum_probs=75.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCC------CcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDS------PIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~------pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
...+|+|.|. ...+|||++.+|.+... +++|..|.++||| .+| |++||+|++|||.++.++++.++..+++
T Consensus 5 ~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 5 LIHMVTLDKT-GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EEEEEEEECT-TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeC-CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3567999985 45789999999986543 7999999999999 899 9999999999999999999999998998
Q ss_pred CCCCeEEEEEEeCC
Q psy12310 110 SSDTSISLGIQRNP 123 (201)
Q Consensus 110 ~~g~~v~L~v~R~~ 123 (201)
..+..+.|+|.|++
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 88999999999976
No 17
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.66 E-value=5.8e-16 Score=117.33 Aligned_cols=87 Identities=22% Similarity=0.436 Sum_probs=77.0
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecC---CCCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCD---LDSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~---~~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
..+.+.|+|.|. ..+|||+|.||.+ ...+++|..|.+++|| .+ ||++||+|++|||+++.+++|.+++.+++.
T Consensus 27 ~~~~~~v~l~k~--~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 27 EATVCTVTLEKM--SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp SEEEEEEEEETT--SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CCcEEEEEEEcC--CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 446778999985 4789999999987 4678999999999999 77 999999999999999999999999999998
Q ss_pred C-CCeEEEEEEeCCC
Q psy12310 111 S-DTSISLGIQRNPP 124 (201)
Q Consensus 111 ~-g~~v~L~v~R~~~ 124 (201)
. +..+.|+|+|...
T Consensus 105 ~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 105 LPDGPVTIVIRRKSL 119 (130)
T ss_dssp SCSSEEEEEEEEESS
T ss_pred CCCceEEEEEEeCCC
Confidence 8 5579999998754
No 18
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.66 E-value=7.8e-16 Score=111.33 Aligned_cols=86 Identities=28% Similarity=0.470 Sum_probs=77.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+.++|+|.|. ..+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~--~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 4 KYEEIVLERG--NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEEECB--TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred eEEEEEEEEC--CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5678999986 47899999998763 468999999999999 899 99999999999999999999999999988
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|++..
T Consensus 82 ~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 82 AGPVVRLVVRRRQPP 96 (102)
T ss_dssp SCSEEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 899999999998754
No 19
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.66 E-value=9.9e-16 Score=111.55 Aligned_cols=86 Identities=20% Similarity=0.366 Sum_probs=76.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+.++|+|.|.. .+|||++.||.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++..++.
T Consensus 3 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 3 KIMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp CEEEEEEECBT--TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred eEEEEEEEECC--CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56789999864 6899999999763 248999999999999 899 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|.+..
T Consensus 81 ~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 81 TSDFVYLKVAKPTSM 95 (105)
T ss_dssp CCSEEEEEEECCCC-
T ss_pred CCCeEEEEEEcCCCC
Confidence 899999999998765
No 20
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.66 E-value=1.4e-15 Score=108.27 Aligned_cols=84 Identities=25% Similarity=0.418 Sum_probs=74.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+.++|+|.|. ..+|||++.||.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~--~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 3 TIMEVNLLKG--PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CEEEEEEECC--TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEEEEC--CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4678999986 36799999998764 348999999999999 899 99999999999999999999999999988
Q ss_pred CCCeEEEEEEeCC
Q psy12310 111 SDTSISLGIQRNP 123 (201)
Q Consensus 111 ~g~~v~L~v~R~~ 123 (201)
.+..+.|+|.|++
T Consensus 81 ~~~~v~l~v~R~g 93 (94)
T 2fe5_A 81 TSDMVYLKVAKPG 93 (94)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 8889999999875
No 21
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.66 E-value=3e-16 Score=113.90 Aligned_cols=86 Identities=24% Similarity=0.502 Sum_probs=77.3
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
.+.++|+|.. ..+|||++.+|.+...+++|..|.++||| ++||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 4 g~~~~v~l~~---~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 80 (103)
T 1wf7_A 4 GSSGSVSLVG---PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 80 (103)
T ss_dssp CCCEEEEEES---SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEE
T ss_pred CCEEEEEEeC---CCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567888883 37799999999988788999999999999 8999999999999999999999999998888788899
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|++..
T Consensus 81 ~l~v~R~g~~ 90 (103)
T 1wf7_A 81 NMTLQRASAA 90 (103)
T ss_dssp EEEECCCSCC
T ss_pred EEEEEeCCCc
Confidence 9999998764
No 22
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.66 E-value=3.8e-16 Score=113.93 Aligned_cols=88 Identities=28% Similarity=0.522 Sum_probs=76.4
Q ss_pred CCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC--CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 34 QPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE--LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 34 ~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag--L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
.+....+.|.|.|. ...+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.+++|.+++.+++.
T Consensus 13 ~~~~~~~~v~l~~~-~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~ 91 (107)
T 3nfk_A 13 IPHDNLVLIRMKPD-ENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 91 (107)
T ss_dssp ---CCCEEEEECCC-TTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHC
T ss_pred CCCCCEEEEEEEcC-CCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35556888999886 457899999999887678999999999999 899 99999999999999999999999999988
Q ss_pred CCC----eEEEEEEeC
Q psy12310 111 SDT----SISLGIQRN 122 (201)
Q Consensus 111 ~g~----~v~L~v~R~ 122 (201)
.+. .|.|+|.|+
T Consensus 92 ~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 92 SCERHSGELMLLVRPN 107 (107)
T ss_dssp GGGSBTTBEEEEEECC
T ss_pred ccccCCcEEEEEEEcC
Confidence 764 999999874
No 23
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=3.7e-16 Score=116.24 Aligned_cols=93 Identities=27% Similarity=0.475 Sum_probs=80.9
Q ss_pred CCCCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-cc--CCCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 32 PAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AA--ELKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 32 ~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~a--gL~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
...+....++|+|.|. ...+|||++.+|.+...+++|..|.++||| .+ ||++||+|++|||.++.+++|.+++.++
T Consensus 9 ~~~~~~~~~~v~l~k~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~ 87 (119)
T 2cs5_A 9 GGIPHDNLVLIRMKPD-ENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 87 (119)
T ss_dssp CCCCSSCCEEEEECCC-SSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHH
T ss_pred CCcCCCCeEEEEEEeC-CCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4456667889999986 456799999999887778999999999999 77 9999999999999999999999999999
Q ss_pred hCCC----CeEEEEEEeCCCC
Q psy12310 109 QSSD----TSISLGIQRNPPG 125 (201)
Q Consensus 109 k~~g----~~v~L~v~R~~~~ 125 (201)
+..+ ..+.|+|.|+...
T Consensus 88 ~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 88 KASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp HHHHHCCSSCEEEEEECCCCC
T ss_pred HhccccCCCEEEEEEEccccc
Confidence 8773 4899999997643
No 24
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.65 E-value=5.3e-16 Score=112.90 Aligned_cols=87 Identities=26% Similarity=0.472 Sum_probs=77.1
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..++|+|.|. ...+|||++.+|.+...+++|..|.++||| . +||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 9 ~~~~v~l~~~-~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v 87 (103)
T 2dc2_A 9 PIRKVLLLKE-DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 87 (103)
T ss_dssp CEEEEEEECC-SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEE
T ss_pred CcEEEEEEeC-CCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 4567888876 467899999999887678999999999999 7 599999999999999999999999999999988899
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|++.|....
T Consensus 88 ~l~v~~~~~~ 97 (103)
T 2dc2_A 88 EFEVVYVALE 97 (103)
T ss_dssp EEEEEECC--
T ss_pred EEEEEecCCc
Confidence 9999987654
No 25
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.65 E-value=8e-16 Score=109.05 Aligned_cols=85 Identities=28% Similarity=0.570 Sum_probs=76.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|.+.+ ..+|||++.+|.+...+++|..|.++||| .+||++||+|++|||.++.++.+.++..+++..+..+.
T Consensus 3 ~~~~v~~~~---~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 3 TTQQIDLQG---PGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEEEES---SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEECC---CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 356777774 37799999999887778999999999999 89999999999999999999999999999988899999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|++..
T Consensus 80 l~v~R~g~~ 88 (91)
T 2pkt_A 80 LTVARSEHE 88 (91)
T ss_dssp EEEEEECCC
T ss_pred EEEEECCcc
Confidence 999998754
No 26
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1.1e-15 Score=113.59 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=80.9
Q ss_pred CCCCCCCCceEEEEEecCCC-----CceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECC
Q psy12310 30 GKPAQPHQNTFTVVIKRPNR-----HHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSR 97 (201)
Q Consensus 30 ~~~~~~~~~~~~V~L~r~~~-----~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~ 97 (201)
|.+.........|+|.|... ..+|||+|.||.+. ..+++|..|.++||| .+| |++||+|++|||.++.
T Consensus 4 G~~~~~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~ 83 (117)
T 1ujd_A 4 GSSGHYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLT 83 (117)
T ss_dssp CSCCCCSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECT
T ss_pred CCCCCCCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcC
Confidence 44444445567889988631 36899999999863 247999999999999 888 9999999999999999
Q ss_pred CCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 98 DLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 98 ~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
+++|.+++.+++.++..|.|+|.|++..
T Consensus 84 ~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 84 SKTYEEVQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp TCCHHHHHHHHSCCSSCEEEEEESSCCC
T ss_pred CCCHHHHHHHHhcCCCEEEEEEEECCcc
Confidence 9999999999998899999999997653
No 27
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.65 E-value=1.3e-15 Score=108.12 Aligned_cols=84 Identities=23% Similarity=0.387 Sum_probs=75.7
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|+|.|. ...+|||++.++.+ ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 4 ~~~~v~l~k~-~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 81 (92)
T 2qg1_A 4 DTLTIGLQKK-PGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTV 81 (92)
T ss_dssp CEEEEEEECC-TTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred eEEEEEEEeC-CCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 5778999985 45789999999876 578999999999999 899 9999999999999999999999998888888899
Q ss_pred EEEEEeCC
Q psy12310 116 SLGIQRNP 123 (201)
Q Consensus 116 ~L~v~R~~ 123 (201)
.|+|.|.+
T Consensus 82 ~l~v~R~~ 89 (92)
T 2qg1_A 82 TLEVGRIS 89 (92)
T ss_dssp EEEEECCC
T ss_pred EEEEEccc
Confidence 99999876
No 28
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1.6e-15 Score=110.80 Aligned_cols=87 Identities=24% Similarity=0.381 Sum_probs=77.6
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC--------CCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHH
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL--------DSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDAT 105 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~--------~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av 105 (201)
..+.++|+|.|. ..+|||+|.+|.+. ..+++|..|.++||| .+ ||++||+|++|||.++.++++.+++
T Consensus 6 ~~~~~~v~l~k~--~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 6 SGKSLTLVLHRD--SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SSEEEEEEECCS--SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEEEeC--CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 446788999986 47899999998753 468999999999999 88 9999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEEeCCC
Q psy12310 106 NFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 106 ~~ik~~g~~v~L~v~R~~~ 124 (201)
.+++..+..+.|+|.|...
T Consensus 84 ~~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 84 EAFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHHCCSSEEEEEEECCS
T ss_pred HHHHcCCCcEEEEEEeCCC
Confidence 9999888999999999764
No 29
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.65 E-value=4.5e-16 Score=115.57 Aligned_cols=87 Identities=24% Similarity=0.434 Sum_probs=77.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC------CCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL------DSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~------~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
+.++|.|.|. ...+|||++.+|.+. ..+++|..|.++|||+++|++||+|++|||.++.+++|.+++.+++..
T Consensus 14 ~~~~v~l~k~-~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 14 EQYTVTLQKD-SKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEEECC-SSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred eEEEEEEEEC-CCCccCEEEeCCcCCccccCCCCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 6778899886 357899999999763 457999999999999999999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..+.|+|.|.+..
T Consensus 93 ~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 93 GKIAAIVVKRPRKV 106 (117)
T ss_dssp CSEEEEEEEEEEEC
T ss_pred CCeEEEEEEECCcc
Confidence 99999999997654
No 30
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.65 E-value=9.9e-16 Score=109.80 Aligned_cols=84 Identities=17% Similarity=0.364 Sum_probs=72.6
Q ss_pred ceEEEEEecCCCCceeEEEEEe-------ecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAG-------GCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~g-------G~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
+.++|+|.|. ...+|||++.+ +.+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++
T Consensus 4 ~~r~v~l~k~-~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 4 QRKVLTLEKG-DNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CEEEEEEECC-TTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeC-CCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5678999987 45789999997 4455568999999999999 8999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeC
Q psy12310 110 SSDTSISLGIQRN 122 (201)
Q Consensus 110 ~~g~~v~L~v~R~ 122 (201)
..+..+.|+|.|.
T Consensus 83 ~~~~~v~l~v~~~ 95 (96)
T 2ego_A 83 ASGNVLRLETLYG 95 (96)
T ss_dssp HTTTEEEEEEECC
T ss_pred hCCCeEEEEEEEC
Confidence 8878999999874
No 31
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.65 E-value=1.8e-15 Score=107.04 Aligned_cols=84 Identities=15% Similarity=0.285 Sum_probs=75.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|+|.|.. .+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.+++|.++..+++..+..+.
T Consensus 4 ~~r~v~l~k~~--~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 80 (90)
T 2he4_A 4 RPRLCHLRKGP--QGYGFNLHSDKS-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 80 (90)
T ss_dssp CCEEEEEECBT--TBCCEEEEECSS-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEE
T ss_pred CcEEEEEEECC--CCccEEEEccCC-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 46689999863 689999998876 568999999999999 89999999999999999999999999999988889999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|.+.
T Consensus 81 l~v~r~~~ 88 (90)
T 2he4_A 81 LLVVGPST 88 (90)
T ss_dssp EEEECCCC
T ss_pred EEEEccCC
Confidence 99998764
No 32
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=114.14 Aligned_cols=86 Identities=24% Similarity=0.410 Sum_probs=76.7
Q ss_pred CceEEEEEecCCCCceeEEEEEeecC---CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCD---LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~---~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
.+.+.|.|.|. ...+|||++.+|.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.+
T Consensus 23 ~~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 23 MHEKVVNIQKD-PGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEECC-TTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCcEEEEEEeC-CCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45678888875 45889999999974 3568999999999999 899 999999999999999999999999999999
Q ss_pred CCeEEEEEEeCC
Q psy12310 112 DTSISLGIQRNP 123 (201)
Q Consensus 112 g~~v~L~v~R~~ 123 (201)
+..|.|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 999999999864
No 33
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1.2e-15 Score=111.01 Aligned_cols=88 Identities=25% Similarity=0.441 Sum_probs=78.1
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC------CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL------DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~------~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
..+.++|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+
T Consensus 5 ~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 82 (105)
T 1wha_A 5 SSGRHVACLARSE--RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSL 82 (105)
T ss_dssp CCEEEEEEECCCT--TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCeeEEEEEEeCC--CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3467889999864 6799999999863 468999999999999 899 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeCCCC
Q psy12310 108 FQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~~ 125 (201)
++..+..+.|+|.|....
T Consensus 83 l~~~g~~v~l~v~R~~~~ 100 (105)
T 1wha_A 83 LTAASPTIALLLEREAGS 100 (105)
T ss_dssp HTSCCSCEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCCC
Confidence 998889999999998654
No 34
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.65 E-value=6.4e-16 Score=109.22 Aligned_cols=84 Identities=20% Similarity=0.357 Sum_probs=74.7
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC--CC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS--DT 113 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~--g~ 113 (201)
+.++|+|.|.. .+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++.. +.
T Consensus 2 ~~~~v~l~~~~--~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 79 (90)
T 2q9v_A 2 MEQDIFLWRKE--TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQG 79 (90)
T ss_dssp EEEEEEEECBT--TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEECC--CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 45789999864 7799999999887788999999999999 899 999999999999999999999999999876 34
Q ss_pred eEEEEEEeCC
Q psy12310 114 SISLGIQRNP 123 (201)
Q Consensus 114 ~v~L~v~R~~ 123 (201)
.+.|+|.|..
T Consensus 80 ~v~l~v~R~~ 89 (90)
T 2q9v_A 80 HVNLTVRQTR 89 (90)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEecc
Confidence 8999999863
No 35
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.64 E-value=4.2e-16 Score=114.45 Aligned_cols=88 Identities=22% Similarity=0.393 Sum_probs=75.9
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC--CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC-
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL--DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS- 111 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~--~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~- 111 (201)
.+.++|.|.|. ...+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||+++.+++|.+++.+++..
T Consensus 4 ~~~~~v~l~k~-~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 4 MNIITVTLNME-KYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp CCEEEEEECHH-HHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred ceEEEEEEEeC-CCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 36788999874 347799999999754 568999999999999 888 999999999999999999999999999765
Q ss_pred --CCeEEEEEEeCCCC
Q psy12310 112 --DTSISLGIQRNPPG 125 (201)
Q Consensus 112 --g~~v~L~v~R~~~~ 125 (201)
+..|.|+|.|....
T Consensus 83 ~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 83 HKPGPIVLTVAKSGGG 98 (108)
T ss_dssp TSSSCEEEEEECCCC-
T ss_pred cCCCeEEEEEEeCCCC
Confidence 45799999997654
No 36
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.64 E-value=2.7e-15 Score=107.20 Aligned_cols=86 Identities=19% Similarity=0.400 Sum_probs=76.8
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
.+.++|.|.|.+ .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..
T Consensus 4 g~~~~v~l~k~~--~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 81 (96)
T 1d5g_A 4 GDIFEVELAKND--NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 81 (96)
T ss_dssp TCEEEEEEECSS--SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCEEEEEEEeCC--CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 357889999864 7899999998764 358999999999999 899 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCC
Q psy12310 112 DTSISLGIQRNPP 124 (201)
Q Consensus 112 g~~v~L~v~R~~~ 124 (201)
+..+.|+|.|++.
T Consensus 82 g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 82 GQVVHLLLEKGQS 94 (96)
T ss_dssp CSEEEEEEECCSC
T ss_pred CCeEEEEEEcCCC
Confidence 8999999998764
No 37
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.64 E-value=2.5e-15 Score=107.76 Aligned_cols=87 Identities=28% Similarity=0.409 Sum_probs=77.6
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCC-CCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLD-SPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~-~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
.+.++|+|.|. ..+|||++.++.+.. .+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 3 g~~~~v~l~~~--~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 80 (98)
T 2opg_A 3 GCETTIEISKG--RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQ 80 (98)
T ss_dssp CEEEEEEEECB--TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CCEEEEEEEEC--CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45778999985 478999999988754 58999999999999 899 99999999999999999999999999988889
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|+|.|++..
T Consensus 81 ~v~l~v~R~~~~ 92 (98)
T 2opg_A 81 RVRLTLYRDEAP 92 (98)
T ss_dssp EEEEEEEECSSC
T ss_pred eEEEEEEcCCCC
Confidence 999999998754
No 38
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=4.5e-15 Score=108.77 Aligned_cols=92 Identities=25% Similarity=0.407 Sum_probs=80.7
Q ss_pred CCCCCCceEEEEEecCCCCceeEEEEEeecC------CCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHH
Q psy12310 32 PAQPHQNTFTVVIKRPNRHHSWGLRIAGGCD------LDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 32 ~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~------~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~a 104 (201)
+.....+.+++.+.+. ..+|||.+.+|.+ ...+++|..|.++||| .+||++||+|++|||.++.++.+.++
T Consensus 9 ~~~~~~~~~~~~l~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~ 86 (110)
T 1x5q_A 9 PARIEEEELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEA 86 (110)
T ss_dssp CCCCCCEEEEEEEECS--SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred cccCCcceEEEEEecC--CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHH
Confidence 4555667888999885 5789999999875 3568999999999999 89999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEeCCCC
Q psy12310 105 TNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 105 v~~ik~~g~~v~L~v~R~~~~ 125 (201)
+..++..+..+.|+|.|++..
T Consensus 87 ~~~~~~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 87 VEALRGAGTAVQMRVWRESGP 107 (110)
T ss_dssp HHHHHSCCSEEEEEEEECSSC
T ss_pred HHHhhCCCCeEEEEEEECCcc
Confidence 888888899999999998754
No 39
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1e-15 Score=108.70 Aligned_cols=85 Identities=27% Similarity=0.494 Sum_probs=75.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..++|+|.|. ..+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 5 ~~r~v~l~k~--~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 5 SSGVVELPKT--DEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp CSCEEEEECC--TTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred CCEEEEEEeC--CCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 3457899885 47899999999877789999999999999 885 9999999999999999999999999998887899
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|...
T Consensus 83 ~l~v~r~~~ 91 (93)
T 2dkr_A 83 KLVVRSGPS 91 (93)
T ss_dssp EEEECCCCS
T ss_pred EEEEEeCCC
Confidence 999988653
No 40
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=112.76 Aligned_cols=90 Identities=24% Similarity=0.333 Sum_probs=79.5
Q ss_pred CCCCceEEEEEecCCCCceeEEEEEeecCC---------CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHH
Q psy12310 34 QPHQNTFTVVIKRPNRHHSWGLRIAGGCDL---------DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHK 102 (201)
Q Consensus 34 ~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---------~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~ 102 (201)
..+.+.++|.|.|. ...+|||+|.||.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.
T Consensus 11 ~~~~~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 89 (117)
T 2ehr_A 11 SHWGPPRIVEIFRE-PNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHS 89 (117)
T ss_dssp SCBCCCEEEEECCC-SSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHH
T ss_pred ccCCCCEEEEEEeC-CCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 45557788999986 457899999999864 358999999999999 898 999999999999999999999
Q ss_pred HHHHHHhCCCCeEEEEEEeCCC
Q psy12310 103 DATNFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 103 ~av~~ik~~g~~v~L~v~R~~~ 124 (201)
+++.+++..+..+.|+|.|...
T Consensus 90 ~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 90 EAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHHHHTSCSSEEEEECCBSC
T ss_pred HHHHHHHcCCCeEEEEEEECCC
Confidence 9999999889999999988764
No 41
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=112.41 Aligned_cols=86 Identities=19% Similarity=0.430 Sum_probs=77.1
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
..+.++|+|.|.. .+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 22 ~~~~~~v~l~~~~--~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~ 99 (112)
T 2r4h_A 22 SMDFYTVELERGA--KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGR 99 (112)
T ss_dssp -CCEEEEEEECBT--TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCceEEEEEEcCC--CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3467789998863 6799999999876789999999999999 899 99999999999999999999999999988889
Q ss_pred eEEEEEEeCC
Q psy12310 114 SISLGIQRNP 123 (201)
Q Consensus 114 ~v~L~v~R~~ 123 (201)
.+.|+|.|++
T Consensus 100 ~v~l~v~R~~ 109 (112)
T 2r4h_A 100 RVRLFLKRGE 109 (112)
T ss_dssp EEEEEEECCE
T ss_pred eEEEEEEeCC
Confidence 9999999875
No 42
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=108.92 Aligned_cols=86 Identities=26% Similarity=0.436 Sum_probs=76.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
+.++|+|.|. ..+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..
T Consensus 3 ~~~~v~l~k~--~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (97)
T 2jil_A 3 RTVEVTLHKE--GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 80 (97)
T ss_dssp EEEEEEEECB--TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEeC--CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4678999885 47899999999753 458999999999999 899 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..+.|+|.|++..
T Consensus 81 g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 81 GQEAALLIEYDVSE 94 (97)
T ss_dssp CSEEEEEEEEECCC
T ss_pred CCeEEEEEEeCCCc
Confidence 89999999997753
No 43
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=5.9e-16 Score=115.43 Aligned_cols=88 Identities=22% Similarity=0.396 Sum_probs=76.9
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
+..+.++|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++
T Consensus 22 ~~~~~~~v~L~k~~--~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 22 SMPQCKSITLERGP--DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp -CCEEEEEEECCBT--TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCccEEEEEEeCC--CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34467789999864 7899999998753 357999999999999 888 9999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCCC
Q psy12310 110 SSDTSISLGIQRNPP 124 (201)
Q Consensus 110 ~~g~~v~L~v~R~~~ 124 (201)
..+..|.|+|.|.+.
T Consensus 100 ~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 100 RTKGTVTLMVLSSDE 114 (117)
T ss_dssp HCCSSEEEEEEECSC
T ss_pred cCCCeEEEEEEeCCc
Confidence 887789999999874
No 44
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=111.70 Aligned_cols=77 Identities=22% Similarity=0.405 Sum_probs=69.9
Q ss_pred CCceeEEEEEeecCCCC-----CcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEe
Q psy12310 49 RHHSWGLRIAGGCDLDS-----PIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQR 121 (201)
Q Consensus 49 ~~~~~Gf~i~gG~~~~~-----pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R 121 (201)
...+|||+|.||.+... +++|..|.++||| ++| |++||+|++|||.++.++++.+++.+++..+..+.|+|.|
T Consensus 11 ~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 90 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAK 90 (106)
T ss_dssp -CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEEC
T ss_pred CCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEe
Confidence 45889999999997543 8999999999999 899 9999999999999999999999999999998999999999
Q ss_pred CCCC
Q psy12310 122 NPPG 125 (201)
Q Consensus 122 ~~~~ 125 (201)
++..
T Consensus 91 ~~~~ 94 (106)
T 4amh_A 91 PGSG 94 (106)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 8753
No 45
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=6.7e-16 Score=111.68 Aligned_cols=84 Identities=20% Similarity=0.361 Sum_probs=71.8
Q ss_pred EEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 40 FTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 40 ~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
.++++.+. +..+|||++.+|.+...+++|..|.++||| ++ ||++||+|++|||.++.++ +.+++.+++..+..+.|
T Consensus 11 ~~~~v~~~-~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l 88 (100)
T 2edp_A 11 QYVPVQLQ-GGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKL 88 (100)
T ss_dssp EEEEEECC-SCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEE
T ss_pred EEEEEEEC-CCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEE
Confidence 34444433 336899999999887778999999999999 88 9999999999999999997 88888899888899999
Q ss_pred EEEeCCCC
Q psy12310 118 GIQRNPPG 125 (201)
Q Consensus 118 ~v~R~~~~ 125 (201)
+|.|++..
T Consensus 89 ~v~R~~~~ 96 (100)
T 2edp_A 89 IVRRRNSG 96 (100)
T ss_dssp EEEECCCS
T ss_pred EEEeCCCC
Confidence 99998764
No 46
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.63 E-value=2.9e-15 Score=112.86 Aligned_cols=90 Identities=21% Similarity=0.346 Sum_probs=78.7
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecC-----CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCD-----LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~-----~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
+..+.++|.|.+. ...+|||++.++.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+
T Consensus 12 ~~~~~~~v~l~~~-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 90 (129)
T 2dmz_A 12 SLFETYNVELVRK-DGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEV 90 (129)
T ss_dssp CCEEEEEEEECCC-TTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHH
T ss_pred CCCcEEEEEEEeC-CCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4457888999664 46789999999875 2458999999999999 899 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeCCCC
Q psy12310 108 FQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~~ 125 (201)
++..+..+.|+|.|++..
T Consensus 91 l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 91 LRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHHCCSSEEEEEEEESSS
T ss_pred HHcCCCeEEEEEEeCCcc
Confidence 988889999999998764
No 47
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.63 E-value=2.2e-15 Score=105.39 Aligned_cols=80 Identities=23% Similarity=0.411 Sum_probs=71.9
Q ss_pred EEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC--CCeE
Q psy12310 40 FTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS--DTSI 115 (201)
Q Consensus 40 ~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~--g~~v 115 (201)
++|+|.|.. .+|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++.. +..+
T Consensus 2 ~~v~l~k~~--~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 79 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 79 (85)
T ss_dssp EEEEEECBT--TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEEECC--CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 578898853 6899999998876778999999999999 899 999999999999999999999999899876 7899
Q ss_pred EEEEEe
Q psy12310 116 SLGIQR 121 (201)
Q Consensus 116 ~L~v~R 121 (201)
.|+|.|
T Consensus 80 ~l~v~R 85 (85)
T 2i04_A 80 DLELCR 85 (85)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999876
No 48
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=109.76 Aligned_cols=86 Identities=27% Similarity=0.507 Sum_probs=76.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC--CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL--DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~--~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
+.++|+|.+. ..+|||.+.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 11 ~~~~v~l~~~--~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 88 (104)
T 2djt_A 11 GHFSVELVRG--YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP 88 (104)
T ss_dssp CCEEEEEECC--SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCS
T ss_pred ceEEEEEEeC--CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5678999985 36899999998764 568999999999999 899 99999999999999999999999988887889
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|+|.|++..
T Consensus 89 ~v~l~v~R~g~~ 100 (104)
T 2djt_A 89 QLHLVIRRPLSG 100 (104)
T ss_dssp EEEEEECCCCCC
T ss_pred eEEEEEEECCCC
Confidence 999999998753
No 49
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.63 E-value=5.1e-15 Score=107.88 Aligned_cols=87 Identities=26% Similarity=0.469 Sum_probs=77.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC------CCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL------DSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~------~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
+.++|+|.|. ...+|||++.+|.+. ..+++|..|.++|||.+||++||+|++|||.++.++++.+++..++..
T Consensus 7 ~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 7 EQHTVTLHRA-PGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEEECB-TTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eeEEEEEEeC-CCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 5788999986 457899999998763 458999999999999889999999999999999999999888888878
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..+.|+|.|++..
T Consensus 86 g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 86 GKNAKITIRRKKGG 99 (107)
T ss_dssp CSEEEEEEEEESCC
T ss_pred CCEEEEEEEECCCC
Confidence 99999999998754
No 50
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.63 E-value=3.3e-15 Score=106.84 Aligned_cols=86 Identities=24% Similarity=0.394 Sum_probs=76.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecC------CCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCD------LDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~------~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+.+++.+.+. ..+|||++.+|.+ ...+++|..|.++||| .+||++||+|++|||.++.++.+.+++..++.
T Consensus 3 ~~~~v~~~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 3 EELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp CEEEEEEECB--TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEEEeC--CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 4678888885 5789999999876 3468999999999999 89999999999999999999999988888887
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|++..
T Consensus 81 ~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 81 AGTAVQMRVWRERET 95 (97)
T ss_dssp SCSEEEEEEECCSSC
T ss_pred CCCeEEEEEEeCCcc
Confidence 899999999998753
No 51
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=3.5e-15 Score=110.99 Aligned_cols=91 Identities=19% Similarity=0.245 Sum_probs=79.7
Q ss_pred CCCCceEEEEEecCCCCceeEEEEEeecCCCC-CcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 34 QPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDS-PIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 34 ~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~-pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
.+....+.|.|.+. ...+|||.+.++.+... +++|..|.++||| ++| |++||+|++|||.++.++++.+++.+++.
T Consensus 11 ~~~~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 89 (117)
T 1v62_A 11 ANASGPLMVEIVKT-PGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS 89 (117)
T ss_dssp CCSSSSEEEEEECC-TTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS
T ss_pred cCCCCcEEEEEEcC-CCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45556788999986 45789999999876443 4999999999999 888 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|.+..
T Consensus 90 ~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 90 ISEKVRLEILPVPQS 104 (117)
T ss_dssp CSSEEEEEECCBTTB
T ss_pred CCCeEEEEEEECCCC
Confidence 899999999997754
No 52
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.63 E-value=2.6e-15 Score=110.47 Aligned_cols=87 Identities=20% Similarity=0.358 Sum_probs=74.9
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC--CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL--DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~--~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
...+.+.|++.|. .+|||++.||.+. ..+++|..|.+++|| .+| |++||+|++|||+++.+++|.+++.+|+.
T Consensus 12 ~~~~~~~v~l~k~---~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~ 88 (109)
T 1wi4_A 12 RDPAFRVITVTKE---TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITR 88 (109)
T ss_dssp CCTTEEEEEECCS---SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHH
T ss_pred CCCcEEEEEEeCC---CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3345678889874 6799999999764 347999999999999 888 99999999999999999999999999976
Q ss_pred C----CCeEEEEEEeCCC
Q psy12310 111 S----DTSISLGIQRNPP 124 (201)
Q Consensus 111 ~----g~~v~L~v~R~~~ 124 (201)
+ +..+.|.+.|.+.
T Consensus 89 ~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 89 AKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SCCSSSSCEEEEEECCCC
T ss_pred cccCCCceEEEEEEeCCC
Confidence 5 4789999999764
No 53
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.62 E-value=2.8e-15 Score=112.50 Aligned_cols=86 Identities=16% Similarity=0.290 Sum_probs=77.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...+|+|.|. ...+|||++.||.+...+++|..|.++||| .+| |++||+|++|||.++.+++|.+++.+++..+..+
T Consensus 19 ~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v 97 (125)
T 3hpk_A 19 VPGKVTLQKD-AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 97 (125)
T ss_dssp EEEEEEEECC-TTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCeEEEEEeC-CCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4667889886 467899999999987788999999999999 899 9999999999999999999999999999888889
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|...
T Consensus 98 ~l~v~r~~~ 106 (125)
T 3hpk_A 98 TIHYNKLQA 106 (125)
T ss_dssp EEEEEEECS
T ss_pred EEEEEECCC
Confidence 999998543
No 54
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.62 E-value=2.8e-15 Score=107.20 Aligned_cols=86 Identities=17% Similarity=0.288 Sum_probs=75.4
Q ss_pred ceEEEEEecCCCCceeEEEEEee--cCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGG--CDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG--~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
..++|+|.|.. .+|||.+.+. .+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..
T Consensus 3 ~~r~v~l~k~~--~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 3 KPRCLHLEKGP--QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp CCEEEEEECBT--TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEEeCC--CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 35689999863 6899999884 343457999999999999 899999999999999999999999999999888899
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
+.|+|.|++..
T Consensus 81 v~l~v~r~~~~ 91 (96)
T 2v90_A 81 VSLTVVDPEAD 91 (96)
T ss_dssp EEEEEECCCTT
T ss_pred EEEEEECCCCc
Confidence 99999998765
No 55
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.62 E-value=3.8e-16 Score=113.46 Aligned_cols=92 Identities=30% Similarity=0.569 Sum_probs=80.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|.+.. ..+|||++.+|.+...+++|..|.++||| ++||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 5 ~~~~v~~~~---~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 81 (103)
T 1v5l_A 5 SSGNVVLPG---PAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLC 81 (103)
T ss_dssp CCBCCEEES---SSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEE
T ss_pred CEEEEEEcC---CCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 455677763 46899999999987778999999999999 89999999999999999999999999999988889999
Q ss_pred EEEEeCCCCCcccccc
Q psy12310 117 LGIQRNPPGEKKAASG 132 (201)
Q Consensus 117 L~v~R~~~~~~~~~~~ 132 (201)
|+|.|++...|.+...
T Consensus 82 l~v~R~g~~~~~~~~~ 97 (103)
T 1v5l_A 82 LKIDRAETRLWSPQVS 97 (103)
T ss_dssp CEECCCTTTTSCSCCC
T ss_pred EEEEECCeEccCCCCC
Confidence 9999998776655543
No 56
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.62 E-value=2.2e-15 Score=114.67 Aligned_cols=86 Identities=15% Similarity=0.285 Sum_probs=75.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCC------------CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLD------------SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~------------~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~a 104 (201)
+.++|+|.|. ...+|||+|.++.+.. .+++|..|.++||| ++||++||+|++|||.++.++++.++
T Consensus 27 ~~r~v~l~r~-~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 27 KEKTVLLQKK-DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCEEEEECC-TTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCEEEEEEEC-CCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 3457999885 4578999999998631 26899999999999 89999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEeCCC
Q psy12310 105 TNFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 105 v~~ik~~g~~v~L~v~R~~~ 124 (201)
+.+++..+..+.|+|.|...
T Consensus 106 ~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 106 VNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHcCCCEEEEEEEECCC
Confidence 99999899999999998754
No 57
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=1.9e-15 Score=110.27 Aligned_cols=85 Identities=22% Similarity=0.393 Sum_probs=74.8
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCc-EEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-----
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPI-VITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS----- 110 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi-~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~----- 110 (201)
.+.|.|.|. ..+|||+|.||.+...|+ +|..|.+++|| .+| |++||+|++|||.++.+++|.+++.+|+.
T Consensus 7 ~~~v~l~k~--~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 7 GTLVRVKKS--AATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SEEEEEECC--SSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred eEEEEEEcC--CCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 557888875 478999999999876676 99999999999 888 99999999999999999999999999986
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.++|.|.+..
T Consensus 85 ~~~~i~l~v~r~~~~ 99 (103)
T 1ufx_A 85 DRDYIDFLVTEFNSG 99 (103)
T ss_dssp SCSEEEEEECCCCCC
T ss_pred CCCeEEEEEEEcccC
Confidence 577899999987643
No 58
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.62 E-value=4.2e-15 Score=108.52 Aligned_cols=90 Identities=20% Similarity=0.373 Sum_probs=77.6
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
...+.+.|.|.|.....+|||++.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+
T Consensus 9 ~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 9 SGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred cCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 33467889996433568899999998753 348999999999999 899 99999999999999999999999988
Q ss_pred HhCCCCeEEEEEEeCCC
Q psy12310 108 FQSSDTSISLGIQRNPP 124 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~ 124 (201)
++..+..+.|+|.|.+.
T Consensus 89 l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 89 LRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHHCSEEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 88788999999999875
No 59
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=3.2e-15 Score=109.15 Aligned_cols=89 Identities=19% Similarity=0.332 Sum_probs=77.3
Q ss_pred CCCceEEEEEecCCCCceeEEEEEe---ecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAG---GCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATN 106 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~g---G~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~ 106 (201)
+..+.+.|.|.|.. .+|||++.+ |.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.
T Consensus 6 ~~~~~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 83 (107)
T 1wf8_A 6 SGLELFPVELEKDE--DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAAT 83 (107)
T ss_dssp CCEEEEEEEEECBT--TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHH
T ss_pred CCceEEEEEEEECC--CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 44577889998863 689999999 4442 357999999999999 899 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEEeCCCC
Q psy12310 107 FFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 107 ~ik~~g~~v~L~v~R~~~~ 125 (201)
+++..+..+.|+|.|.+..
T Consensus 84 ~~~~~~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 84 VLRNTKGNVRFVIGREKPS 102 (107)
T ss_dssp HHHHCCSEEEEEEEEECCC
T ss_pred HHhcCCCeEEEEEEeCCCC
Confidence 9988899999999997754
No 60
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.62 E-value=3.3e-15 Score=108.69 Aligned_cols=85 Identities=28% Similarity=0.429 Sum_probs=76.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|+|.|. ...+|||.+.++.+...+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++. +..+.
T Consensus 15 ~~~~v~l~k~-~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~ 92 (104)
T 1wi2_A 15 LPRIVTLKKP-PGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREIS 92 (104)
T ss_dssp CCEEEEECCC-TTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEE
T ss_pred CCEEEEEEeC-CCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEE
Confidence 3568999987 457899999999877789999999999999 89999999999999999999999999999987 78999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|...
T Consensus 93 l~v~r~~~ 100 (104)
T 1wi2_A 93 MRVRFFSG 100 (104)
T ss_dssp EEEECCCC
T ss_pred EEEEECCC
Confidence 99998754
No 61
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=2.8e-15 Score=109.53 Aligned_cols=89 Identities=18% Similarity=0.374 Sum_probs=78.7
Q ss_pred CCCceEEEEEecCCCCceeEEEEE-----eecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIA-----GGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~-----gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~a 104 (201)
+..+.++|+|.|.+ .+|||++. ||.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++
T Consensus 6 ~~~~~~~v~l~k~~--~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 83 (108)
T 1q7x_A 6 KPGDIFEVELAKND--NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQA 83 (108)
T ss_dssp CSSSEEEEEEESSS--CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHH
T ss_pred CCCcEEEEEEEECC--CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 44578899999864 78999999 88764 468999999999999 899 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEeCCCC
Q psy12310 105 TNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 105 v~~ik~~g~~v~L~v~R~~~~ 125 (201)
+.+++..+..+.|+|.|++..
T Consensus 84 ~~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 84 VETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp HHHHHHTTSEEEEEEECCCCS
T ss_pred HHHHHcCCCeEEEEEEeCCcc
Confidence 999988899999999998753
No 62
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.62 E-value=2e-15 Score=113.69 Aligned_cols=89 Identities=24% Similarity=0.348 Sum_probs=78.0
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCC---CCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECC-CCCHHHHHHHHh
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLD---SPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSR-DLRHKDATNFFQ 109 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~---~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~-~~~~~~av~~ik 109 (201)
..+.++|+|.|. ...+|||++.+|.+.. .+++|..|.++||| .+| |++||+|++|||.++. ++++.+++.+++
T Consensus 23 ~~~~~~v~l~k~-~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 23 GRQIEYIDIERP-STGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp TCEEEEEEEECC-SSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred cCceEEEEEEEC-CCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 346778999986 3478999999998643 37999999999999 899 9999999999999997 999999999999
Q ss_pred CCCCeEEEEEEeCCCC
Q psy12310 110 SSDTSISLGIQRNPPG 125 (201)
Q Consensus 110 ~~g~~v~L~v~R~~~~ 125 (201)
..+..|.|+|.|....
T Consensus 102 ~~~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 102 QTTGSLRLIVAREPVH 117 (128)
T ss_dssp HCCSEEEEEEEECCCS
T ss_pred cCCCeEEEEEEcCCCC
Confidence 8899999999998643
No 63
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.62 E-value=5.6e-15 Score=111.66 Aligned_cols=92 Identities=22% Similarity=0.397 Sum_probs=80.8
Q ss_pred CCCCCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 31 KPAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 31 ~~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
.+.....+.++|+|.|. ..+|||++.+|.+...+++|..|.++||| ++| |++||+|++|||.++.+++|.+++.++
T Consensus 11 ~~~~~~g~~~~v~l~~~--~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 88 (129)
T 2kpk_A 11 NPSELKGKFIHTKLRKS--SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 88 (129)
T ss_dssp CTTTSCSEEEEEEEEEC--SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CchhcCCcEEEEEEEEC--CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35556668889999985 46899999998876678999999999999 899 999999999999999999999999999
Q ss_pred hCC--CCeEEEEEEeCCC
Q psy12310 109 QSS--DTSISLGIQRNPP 124 (201)
Q Consensus 109 k~~--g~~v~L~v~R~~~ 124 (201)
+.. +..|.|+|.|+..
T Consensus 89 ~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 89 QSIPIGASVDLELCRGYP 106 (129)
T ss_dssp HHSCTTEEEEEEEEECSC
T ss_pred HhCCCCCeEEEEEEeCCC
Confidence 876 7889999999764
No 64
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.62 E-value=5.3e-15 Score=105.56 Aligned_cols=82 Identities=27% Similarity=0.440 Sum_probs=72.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecC--------CCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCD--------LDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~--------~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
..++|++.+. .+|||+|.||.+ ...+++|..|.++||| . ||++||+|++|||.++.++++.+++..+
T Consensus 3 ~~~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (95)
T 1mfg_A 3 MEIRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 78 (95)
T ss_dssp EEEEEEEECS---SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred eEEEEEECCC---CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHh
Confidence 3567888875 379999999874 3568999999999999 8 9999999999999999999999999888
Q ss_pred hCCCCeEEEEEEeCC
Q psy12310 109 QSSDTSISLGIQRNP 123 (201)
Q Consensus 109 k~~g~~v~L~v~R~~ 123 (201)
+..+..+.|+|.|+.
T Consensus 79 ~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 79 KTFQNTVELIIVREV 93 (95)
T ss_dssp HHCCSEEEEEEEEEC
T ss_pred hcCCCeEEEEEEeCC
Confidence 888999999999864
No 65
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=3.5e-15 Score=111.12 Aligned_cols=85 Identities=21% Similarity=0.420 Sum_probs=76.0
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
.+.+.|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++
T Consensus 23 ~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 100 (117)
T 2byg_A 23 MTVVEIKLFKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILK 100 (117)
T ss_dssp EEEEEEEEECBT--TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CceEEEEEEeCC--CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 357788898863 7899999998753 358999999999999 899 9999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCC
Q psy12310 110 SSDTSISLGIQRNP 123 (201)
Q Consensus 110 ~~g~~v~L~v~R~~ 123 (201)
..+..|.|+|.|.+
T Consensus 101 ~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 101 NTSEVVYLKVGKPT 114 (117)
T ss_dssp TCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCC
Confidence 88999999999975
No 66
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.61 E-value=3.4e-15 Score=109.37 Aligned_cols=85 Identities=21% Similarity=0.265 Sum_probs=75.1
Q ss_pred CceEEEEEecCCCCceeEEEEEeecC----CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCD----LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~----~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
.+.++|.|.|.+ .+|||+|.+|.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.
T Consensus 14 ~~~~~v~l~k~~--~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 14 PEVKIVELVKDC--KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp SSCEEEEEEECS--SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CceEEEEEEECC--CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356789999864 689999999876 2467999999999999 888 99999999999999999999999999988
Q ss_pred C-CCeEEEEEEeCC
Q psy12310 111 S-DTSISLGIQRNP 123 (201)
Q Consensus 111 ~-g~~v~L~v~R~~ 123 (201)
. +..|.|+|.|..
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 5 678999999865
No 67
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.61 E-value=9e-15 Score=103.46 Aligned_cols=83 Identities=17% Similarity=0.255 Sum_probs=71.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|+|.|.. .+|||++.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+.
T Consensus 3 ~~r~v~l~r~~--~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 79 (91)
T 1g9o_A 3 LPRLCCLEKGP--NGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVR 79 (91)
T ss_dssp CCEEEEEECBT--TBCCEEEEECTT-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEEEeCC--CcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 35689999864 689999999876 468999999999999 89999999999999999999999999999998866666
Q ss_pred EEEEeCC
Q psy12310 117 LGIQRNP 123 (201)
Q Consensus 117 L~v~R~~ 123 (201)
+.+.|.+
T Consensus 80 ~~~~~r~ 86 (91)
T 1g9o_A 80 LLVVDPE 86 (91)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 6655543
No 68
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=6.3e-16 Score=111.78 Aligned_cols=88 Identities=23% Similarity=0.422 Sum_probs=77.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.+++.|.+. ..+|||.+.++.+...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 11 ~~~~v~l~~~--~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 11 DYFTVDMEKG--AKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp CCEECCEECC--TTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred eEEEEEEecC--CCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 5667888875 36799999999886678999999999999 899 9999999999999999999999998888678999
Q ss_pred EEEEEeCCCCCc
Q psy12310 116 SLGIQRNPPGEK 127 (201)
Q Consensus 116 ~L~v~R~~~~~~ 127 (201)
.|+|.|++...|
T Consensus 89 ~l~v~R~~~~~~ 100 (103)
T 1wfv_A 89 RLLLKRGTGSGP 100 (103)
T ss_dssp CEEEECTTCSSC
T ss_pred EEEEEECCCCCC
Confidence 999999876543
No 69
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=1.1e-15 Score=112.33 Aligned_cols=86 Identities=21% Similarity=0.307 Sum_probs=75.6
Q ss_pred eEEEEEecCCCCceeEEEEEeecC---------CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCD---------LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~---------~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
.++|.|.|. ...+|||++.+|.+ ...+++|..|.++||| ++| |++||+|++|||.++.++++.+++.+
T Consensus 10 ~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 10 LRELCIQKA-PGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSCEEEECC-TTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred cEEEEEEEC-CCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456888876 45789999999974 2458999999999999 899 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeCCCC
Q psy12310 108 FQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~~ 125 (201)
++..+..+.|+|.|+...
T Consensus 89 l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp HSSCSSEEEECCCCCCCC
T ss_pred HHcCCCeEEEEEEECCCC
Confidence 998899999999987643
No 70
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2.6e-15 Score=111.92 Aligned_cols=89 Identities=26% Similarity=0.398 Sum_probs=78.8
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
+....++|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+
T Consensus 14 ~~~~~~~v~l~r~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 91 (120)
T 2eno_A 14 YLVTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 91 (120)
T ss_dssp EEEEEEEEEEECCS--SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHH
T ss_pred CCCceEEEEEEECC--CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34467889999964 7899999999874 568999999999999 899 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeCCCC
Q psy12310 108 FQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 108 ik~~g~~v~L~v~R~~~~ 125 (201)
++..+..|.|+|.|....
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 92 FRNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp HHHHCSEEEEEEEEEEEC
T ss_pred HHcCCCeEEEEEEeCCcC
Confidence 987788999999997653
No 71
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=7e-15 Score=107.77 Aligned_cols=89 Identities=20% Similarity=0.323 Sum_probs=78.2
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
+..+.++|+|.|.. .+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++
T Consensus 5 ~~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 5 SSGYVFTVELERGP--SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp SCCCEEEEEEECCT--TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred CCCcEEEEEEEECC--CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34467899999863 6899999998753 358999999999999 899 9999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCCCC
Q psy12310 110 SSDTSISLGIQRNPPG 125 (201)
Q Consensus 110 ~~g~~v~L~v~R~~~~ 125 (201)
..+..+.|+|.|.+..
T Consensus 83 ~~~~~v~l~v~R~~~~ 98 (110)
T 1um1_A 83 HGGKKMRFLVAKSDVE 98 (110)
T ss_dssp TCCSEEEEEEECCCHH
T ss_pred cCCCeEEEEEEeCCcc
Confidence 8899999999998653
No 72
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.60 E-value=1.8e-15 Score=114.23 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=74.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
..++|.|.+. ...+|||++.++.+. ..+++|..|.++||| .+| |++||+|++|||+++.+++|.+++.+|+.+
T Consensus 25 ~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 25 LTLEIPLNDS-GSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEEEECSSS-TTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred eEEEEEEeeC-CCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 4556677633 468899999998753 247999999999999 888 999999999999999999999999999865
Q ss_pred -------CCeEEEEEEeCCCC
Q psy12310 112 -------DTSISLGIQRNPPG 125 (201)
Q Consensus 112 -------g~~v~L~v~R~~~~ 125 (201)
+..|.|+|.|....
T Consensus 104 ~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 104 MSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHHHTCEEEEEEEECSCS
T ss_pred hccccCCCCEEEEEEEeCCCC
Confidence 78999999998753
No 73
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.60 E-value=3.8e-15 Score=125.80 Aligned_cols=88 Identities=22% Similarity=0.363 Sum_probs=80.3
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
.+.++|+|.|. ...+|||+|.||.+...+++|.+|.+|||| . +||++||+|++|||+++.+++|.+++.+++..+..
T Consensus 76 ~~~r~V~L~k~-~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 76 LQRRRVTVRKA-DAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp CSSEEECCCTT-TTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred CccEEEEEEeC-CCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 36788999986 357899999999987789999999999999 7 79999999999999999999999999999999999
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
|.|+|.|.+..
T Consensus 155 V~L~V~R~~~~ 165 (263)
T 1z87_A 155 VVLEVKYMKEV 165 (263)
T ss_dssp CCEEEECCSSS
T ss_pred EEEEEEeCccc
Confidence 99999997654
No 74
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=9.7e-15 Score=105.34 Aligned_cols=88 Identities=20% Similarity=0.325 Sum_probs=76.9
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
....++|+|.|. ....|||.+.++.+...+++|..|.++||| .+||++||+|++|||.++.++++.+++..++. +..
T Consensus 8 ~~~~~~v~l~~~-~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 8 SDIIHSVRVEKS-PAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp CCEECCEEECCC-SSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred CCeEEEEEEEEC-CCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 345667899886 346799999998776779999999999999 89999999999999999999998888888877 799
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
+.|+|.|++..
T Consensus 86 v~l~v~R~g~~ 96 (100)
T 2eeh_A 86 LHMMVRRMGSG 96 (100)
T ss_dssp EEEEEEECSCC
T ss_pred EEEEEEECCcC
Confidence 99999998753
No 75
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=6.3e-15 Score=108.84 Aligned_cols=87 Identities=26% Similarity=0.390 Sum_probs=75.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-------CCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-------DSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-------~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
+.++|.|.|. ...+|||.|.++.+. ..+++|..|.++||| . +||++||+|++|||.++.++++.++..++
T Consensus 10 ~~~~v~l~~~-~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 10 QTSDVVIHRK-ENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCEEEEEECC-TTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred cceEEEEEEC-CCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5568899886 457899999987543 237799999999999 8 99999999999999999999999999999
Q ss_pred hCCCCeEEEEEEeCCCC
Q psy12310 109 QSSDTSISLGIQRNPPG 125 (201)
Q Consensus 109 k~~g~~v~L~v~R~~~~ 125 (201)
+..+..+.|+|.|.+..
T Consensus 89 ~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 89 KDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHTTTEEEEEECCCSCC
T ss_pred HcCCCeEEEEEEeCCcC
Confidence 88899999999998754
No 76
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.60 E-value=9.5e-15 Score=105.71 Aligned_cols=83 Identities=27% Similarity=0.461 Sum_probs=74.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.+.|+|.|.+ .+|||++.++.+ ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++..++..+..+
T Consensus 11 ~~~~v~l~k~~--~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 87 (104)
T 3i4w_A 11 EPRRIVIHRGS--TGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 87 (104)
T ss_dssp SCEEEEEECBT--TBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred ccEEEEEEeCC--CccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 46679999863 689999999876 568999999999999 899 9999999999999999999999999999889999
Q ss_pred EEEEEeCC
Q psy12310 116 SLGIQRNP 123 (201)
Q Consensus 116 ~L~v~R~~ 123 (201)
.|+|.|.+
T Consensus 88 ~l~v~r~~ 95 (104)
T 3i4w_A 88 TIIAQYKP 95 (104)
T ss_dssp EEEEEECH
T ss_pred EEEEEECc
Confidence 99999874
No 77
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.60 E-value=7.5e-15 Score=106.91 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=75.5
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecC---CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCD---LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~---~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
..+.++|+| +. ..+|||++.+|.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.
T Consensus 9 ~~~~~~v~l-~~--~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 9 EPEIITVTL-KK--QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp -CCEEEEEE-EC--SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEE-CC--CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 346778888 53 4789999999864 2458999999999999 899 99999999999999999999999999988
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|.+..
T Consensus 86 ~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 86 TSSVVTLEVAKQGAI 100 (106)
T ss_dssp CCSEEEEEEECCCSS
T ss_pred CCCeEEEEEEeCCcc
Confidence 999999999998754
No 78
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.59 E-value=4.9e-15 Score=111.10 Aligned_cols=88 Identities=20% Similarity=0.345 Sum_probs=78.0
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC-CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL-DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSD 112 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~-~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g 112 (201)
..+.++|.|.|. ..+|||++.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+
T Consensus 23 ~~~~~~v~l~k~--~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 23 PGELHIIELEKD--KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp SSEEEEEEEECC--SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred CCceEEEEEEeC--CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 346778999986 47899999999764 368999999999999 888 9999999999999999999999999998888
Q ss_pred CeEEEEEEeCCCC
Q psy12310 113 TSISLGIQRNPPG 125 (201)
Q Consensus 113 ~~v~L~v~R~~~~ 125 (201)
..+.|+|.|.+..
T Consensus 101 ~~v~l~v~R~~~~ 113 (124)
T 2daz_A 101 SKVKLVFIRNEDA 113 (124)
T ss_dssp SEEEEEEEECTTH
T ss_pred CeEEEEEEeCCCc
Confidence 8999999998753
No 79
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.59 E-value=1.9e-14 Score=106.97 Aligned_cols=90 Identities=18% Similarity=0.385 Sum_probs=75.8
Q ss_pred CCCceEEEEEecCCCCceeEEEEEeecCC-CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 35 PHQNTFTVVIKRPNRHHSWGLRIAGGCDL-DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~-~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
.......|.|.|. ...+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..
T Consensus 12 ~~~~~~~v~l~~~-~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 90 (119)
T 1x6d_A 12 QLDGIHVTILHKE-EGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 90 (119)
T ss_dssp SCTTEEEEEEECC-TTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT
T ss_pred CCCCeEEEEEEeC-CCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3345667778775 468899999999874 568999999999999 899 999999999999999999999999999777
Q ss_pred -CCeEEEEEEeCCCC
Q psy12310 112 -DTSISLGIQRNPPG 125 (201)
Q Consensus 112 -g~~v~L~v~R~~~~ 125 (201)
+..+.+++.|.+..
T Consensus 91 ~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 91 REPRQAVIVTRKLTP 105 (119)
T ss_dssp TSSSEEEEEEECCCS
T ss_pred CCCeEEEEEEcCCCc
Confidence 45566888887754
No 80
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.59 E-value=1.7e-15 Score=108.19 Aligned_cols=77 Identities=34% Similarity=0.601 Sum_probs=70.4
Q ss_pred CCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 49 RHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 49 ~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
+..+|||++.+|.+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.|+|.|++..
T Consensus 14 ~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 14 GPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSGP 91 (94)
T ss_dssp SSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCCC
T ss_pred CCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCcC
Confidence 457899999999887778999999999999 89999999999999999999999999999988778999999998753
No 81
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.59 E-value=2.3e-15 Score=106.72 Aligned_cols=85 Identities=18% Similarity=0.213 Sum_probs=71.7
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|+|.|.. .+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNAIRG-LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBCCTT-CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEE
T ss_pred CcEEEEEEeCC--CcccEEEEeccC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 46789999864 579999988765 458899999999999 89999999999999999999999999999988789999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|.+..
T Consensus 80 l~v~r~~~~ 88 (91)
T 2vsp_A 80 LLVCGKKAQ 88 (91)
T ss_dssp EEEEC----
T ss_pred EEEEeCCcc
Confidence 999997753
No 82
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.58 E-value=8.7e-15 Score=105.85 Aligned_cols=86 Identities=22% Similarity=0.402 Sum_probs=75.4
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...++|+|.|. ..+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 5 ~~~r~v~l~k~--~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (102)
T 2d90_A 5 SSGRVVVIKKG--SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 81 (102)
T ss_dssp SSSEEEEEECC--SSSSSCEEEECSS-SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEE
T ss_pred CCCEEEEEeeC--CCCccEEEEeecC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 35678999985 3689999998765 468999999999999 8999999999999999999999999998888788999
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|.+..
T Consensus 82 ~l~v~r~~~~ 91 (102)
T 2d90_A 82 TLLVLDKEAE 91 (102)
T ss_dssp EEEECSTTCC
T ss_pred EEEEEECCCc
Confidence 9999887654
No 83
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.58 E-value=1.3e-14 Score=105.67 Aligned_cols=86 Identities=19% Similarity=0.385 Sum_probs=73.6
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCC-----------CC-cEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHH
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLD-----------SP-IVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKD 103 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~-----------~p-i~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~ 103 (201)
...++|.|.|.. .+|||++.++.+.. .| ++|..|.++||| .+||++||+|++|||.++.++++.+
T Consensus 5 ~~~r~v~l~k~~--~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 5 GSPRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp -CCEEEEEECBT--TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred CCcEEEEEEECC--CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 456789999864 57999999985432 22 369999999999 8999999999999999999999999
Q ss_pred HHHHHhCCCCeEEEEEEeCCC
Q psy12310 104 ATNFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 104 av~~ik~~g~~v~L~v~R~~~ 124 (201)
++.+++.++..+.|+|.|...
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCC
Confidence 999999889999999998764
No 84
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.58 E-value=9.7e-15 Score=105.78 Aligned_cols=84 Identities=26% Similarity=0.444 Sum_probs=74.5
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecC--------CCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHH
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCD--------LDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATN 106 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~--------~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~ 106 (201)
..+.++|++.+. .+|||++.||.+ ...+++|..|.++||| . ||++||+|++|||.++.++++.+++.
T Consensus 9 ~~~~~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~ 84 (103)
T 1n7t_A 9 AKQEIRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVS 84 (103)
T ss_dssp SCCCEEEEEECS---SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred ccEEEEEEEccC---CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345678999875 479999999875 3568999999999999 8 99999999999999999999999999
Q ss_pred HHhCCCCeEEEEEEeCC
Q psy12310 107 FFQSSDTSISLGIQRNP 123 (201)
Q Consensus 107 ~ik~~g~~v~L~v~R~~ 123 (201)
.++..+..+.|+|.|+.
T Consensus 85 ~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 85 LLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHCCSEEEEEEECCC
T ss_pred HhhcCCCeEEEEEEecC
Confidence 99888999999999864
No 85
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.58 E-value=1.4e-14 Score=106.08 Aligned_cols=86 Identities=15% Similarity=0.285 Sum_probs=74.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCC------------CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLD------------SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~------------~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~a 104 (201)
+..+|+|.|. ...+|||++.++.+.. .+++|..|.++||| .+||++||+|++|||.++.+++|.++
T Consensus 7 ~~~~v~l~~~-~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKK-DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECC-TTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEEC-CCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 4567888765 4678999999987632 26899999999999 89999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEeCCC
Q psy12310 105 TNFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 105 v~~ik~~g~~v~L~v~R~~~ 124 (201)
+.+++..+..+.|+|.|...
T Consensus 86 ~~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHHhCCCEEEEEEEECCC
Confidence 99998888899999988653
No 86
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.58 E-value=4e-15 Score=110.19 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=77.7
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECC-CCCHHHHHHHHhC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSR-DLRHKDATNFFQS 110 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~-~~~~~~av~~ik~ 110 (201)
.+.++|.|.|. ...+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++. ++++.+++.+++.
T Consensus 19 ~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 19 RHVEVFELLKP-PSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp SCEEEEEEECC-SSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CeEEEEEEEEC-CCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 46788999986 357899999998742 358999999999999 899 9999999999999998 9999999999988
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|+|.|++..
T Consensus 98 ~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 98 AKDTVQLVIARGSLP 112 (117)
T ss_dssp CCSEEEEEEESSCCG
T ss_pred CCCEEEEEEEeCCcc
Confidence 899999999998753
No 87
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.57 E-value=2.9e-14 Score=104.57 Aligned_cols=86 Identities=24% Similarity=0.438 Sum_probs=76.1
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
+.+.+.|.|.+.+ .+|||.+.++.+ .+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 13 ~~~~~~v~l~~~~--~~lG~~l~~~~~--~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 88 (111)
T 2dlu_A 13 WGHVEEVELINDG--SGLGFGIVGGKT--SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGN 88 (111)
T ss_dssp CSEEEEEEEECCS--SCCCEEEECCSS--SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCS
T ss_pred cCceEEEEEEeCC--CccCEEEeccCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4467889998863 679999998765 58999999999999 899 99999999999999999999999999987789
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|+|.|++..
T Consensus 89 ~v~l~v~R~~~~ 100 (111)
T 2dlu_A 89 SVRMLVARDPAG 100 (111)
T ss_dssp EEEEEEEESCTT
T ss_pred eEEEEEEeCCCC
Confidence 999999997754
No 88
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.57 E-value=8.1e-15 Score=110.65 Aligned_cols=88 Identities=14% Similarity=0.247 Sum_probs=76.6
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC---------CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHH
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL---------DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDAT 105 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~---------~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av 105 (201)
...+.|+|.|.+...+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 356789999874357899999998642 237999999999999 899 999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEEeCCC
Q psy12310 106 NFFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 106 ~~ik~~g~~v~L~v~R~~~ 124 (201)
.+++..+..|.|+|.|.+.
T Consensus 108 ~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 108 DMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHTTTSEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEECCc
Confidence 9998888889999999875
No 89
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=2.2e-14 Score=101.74 Aligned_cols=82 Identities=22% Similarity=0.318 Sum_probs=71.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|+|.|. ..+|||.+.+. .+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 3 ~~r~v~l~~~--~~g~G~~l~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 76 (91)
T 2f5y_A 3 RYRQITIPRG--KDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 76 (91)
T ss_dssp EEEEEEEECB--TTBTSEEEECS----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ceEEEEEEeC--CCCccEEEecC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4568999885 36799999764 46999999999999 89999999999999999999999999999988888999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|.+..
T Consensus 77 l~v~R~~~~ 85 (91)
T 2f5y_A 77 LLVWRMVPQ 85 (91)
T ss_dssp EEEEECC--
T ss_pred EEEEeCCCC
Confidence 999997653
No 90
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.57 E-value=2.3e-14 Score=107.14 Aligned_cols=91 Identities=23% Similarity=0.403 Sum_probs=78.2
Q ss_pred CCCCceEEEEEecCCCCceeEEEEEeec----CCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 34 QPHQNTFTVVIKRPNRHHSWGLRIAGGC----DLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 34 ~~~~~~~~V~L~r~~~~~~~Gf~i~gG~----~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
....+.++|+|.|. ...+|||.+.++. +...+++|..|.++||| ++| |++||+|++|||+++.++++.++..+
T Consensus 11 ~~~~~~~~v~l~k~-~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 11 VVHTETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp CCCEEEEEEEECCC-SSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred cccceeEEEEEEeC-CCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34557889999886 4588999999873 23568999999999999 899 99999999999999999999999988
Q ss_pred HhCC--CCeEEEEEEeCCCC
Q psy12310 108 FQSS--DTSISLGIQRNPPG 125 (201)
Q Consensus 108 ik~~--g~~v~L~v~R~~~~ 125 (201)
++.. +..+.|+|.|++..
T Consensus 90 l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 90 LRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHHHTTTTCEEEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEECCcc
Confidence 8765 78999999998764
No 91
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.57 E-value=1.5e-14 Score=102.90 Aligned_cols=84 Identities=15% Similarity=0.311 Sum_probs=72.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..+.|+|.|.+ .+|||++.++ +...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 4 ~~r~v~l~k~~--~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 80 (93)
T 3o46_A 4 SVKIIRLVKNR--EPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAI 80 (93)
T ss_dssp CCEEEEEEESS--SCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEE
T ss_pred cEEEEEEEeCC--CCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 35678998863 6899999987 33578999999999999 888 9999999999999999999999999998887799
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|...
T Consensus 81 ~l~v~~~~~ 89 (93)
T 3o46_A 81 TFKIIPGSK 89 (93)
T ss_dssp EEEEECC--
T ss_pred EEEEEeCCC
Confidence 999987643
No 92
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=106.94 Aligned_cols=86 Identities=27% Similarity=0.411 Sum_probs=76.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCC-CCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLD-SPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~-~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
+.+.|.|.+. ..+|||.+.++.+.. .+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..
T Consensus 17 ~~~~v~l~~~--~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 17 QEMIIEISKG--RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp SCEEEEEECC--SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CEEEEEEEEC--CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4578889875 478999999988754 58999999999999 899 999999999999999999999999999888899
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
|.|+|.|++..
T Consensus 95 v~l~v~R~~~~ 105 (116)
T 2dm8_A 95 VRLVVYRDEAH 105 (116)
T ss_dssp EEEEEECCSSC
T ss_pred EEEEEEeCCcc
Confidence 99999998754
No 93
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.57 E-value=1e-14 Score=107.32 Aligned_cols=87 Identities=20% Similarity=0.382 Sum_probs=76.3
Q ss_pred CceEEEEEecCCCCceeEEEEEe---ecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAG---GCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~g---G~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
.+.++|+|.|. ..+|||++.+ |.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.++
T Consensus 3 ~~~~~v~l~k~--~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 3 MELFPVELEKD--SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CEEEEEECCCC--SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEEeC--CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35778999885 3789999998 4432 458999999999999 899 999999999999999999999999999
Q ss_pred hCCCCeEEEEEEeCCCC
Q psy12310 109 QSSDTSISLGIQRNPPG 125 (201)
Q Consensus 109 k~~g~~v~L~v~R~~~~ 125 (201)
+..+..+.|+|.|.+..
T Consensus 81 ~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 81 RNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHSCSSCEEEEEECCCC
T ss_pred hcCCCeEEEEEEeCCCC
Confidence 88899999999998765
No 94
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.57 E-value=1.1e-14 Score=115.40 Aligned_cols=85 Identities=18% Similarity=0.343 Sum_probs=75.0
Q ss_pred CCceEEEEEecCCCCceeEEEEEe---ecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHH
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAG---GCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNF 107 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~g---G~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ 107 (201)
..+.++|+|.|.. .+|||+|.+ |.+. ..+++|..|.+|||| .+| |++||+|++|||.++.+++|.+++.+
T Consensus 78 ~~~~~~v~l~k~~--~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~ 155 (170)
T 3egg_C 78 RLELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASV 155 (170)
T ss_dssp TSEEEEEEEECBT--TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHH
T ss_pred CceEEEEEEEeCC--CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3467889999864 689999999 4332 357999999999999 888 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEeC
Q psy12310 108 FQSSDTSISLGIQRN 122 (201)
Q Consensus 108 ik~~g~~v~L~v~R~ 122 (201)
++.++..|.|+|.|+
T Consensus 156 l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 156 LRNTKGRVRFMIGRE 170 (170)
T ss_dssp HHHCCSEEEEEEEEC
T ss_pred HHcCCCEEEEEEEeC
Confidence 999999999999984
No 95
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.57 E-value=1.3e-14 Score=103.25 Aligned_cols=83 Identities=23% Similarity=0.409 Sum_probs=71.7
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
.+.|+|.|. ..+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.+++|.++..+++..+..+.+
T Consensus 6 ~r~v~l~~~--~~~~G~~l~~~~~-~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 6 PRVVVIKKG--SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CEEEEEECB--TTBCSCEEEEC---CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred cEEEEEecC--CCcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 457889885 4789999998776 358999999999999 899999999999999999999999999999998888888
Q ss_pred EEEeCCC
Q psy12310 118 GIQRNPP 124 (201)
Q Consensus 118 ~v~R~~~ 124 (201)
++.|.+.
T Consensus 83 ~~~r~~~ 89 (95)
T 3r68_A 83 LVLDKEL 89 (95)
T ss_dssp EEEECC-
T ss_pred EEECCcc
Confidence 8888664
No 96
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.8e-15 Score=106.04 Aligned_cols=83 Identities=23% Similarity=0.394 Sum_probs=74.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
..++|+|.|.....+|||.+.+ ..+++|..|.++|||++||++||+|++|||.++.++++.+++.+++..+..+.|
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~----~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l 83 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE----SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSI 83 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS----SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEE
T ss_pred ccEEEEEEECCCCCcccEEEec----CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4678999987434589999987 458999999999999999999999999999999999999999999888999999
Q ss_pred EEEeCCC
Q psy12310 118 GIQRNPP 124 (201)
Q Consensus 118 ~v~R~~~ 124 (201)
+|.|+..
T Consensus 84 ~v~R~~~ 90 (96)
T 2edv_A 84 TVVRCTS 90 (96)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999873
No 97
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=1e-14 Score=103.18 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=71.7
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
.+.|.|.|. .+.+|||++.++.+ .+++|.+|.++||| . +||++||+|++|||.++.++++.+++.+++.....+.
T Consensus 2 ~r~V~l~K~-~~~~lG~~i~~~~~--~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~ 78 (88)
T 1kwa_A 2 SRLVQFQKN-TDEPMGITLKMNEL--NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSIT 78 (88)
T ss_dssp CEEEEEEEC-SSSCCCEEEECSCG--GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEE
T ss_pred eEEEEEEeC-CCCceeEEEEeCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEE
Confidence 356889886 45789999987532 47999999999999 7 8999999999999999999999999999987755999
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|.+.
T Consensus 79 l~v~r~~~ 86 (88)
T 1kwa_A 79 FKIVPSYR 86 (88)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99998764
No 98
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.56 E-value=2.6e-14 Score=105.50 Aligned_cols=86 Identities=14% Similarity=0.264 Sum_probs=74.8
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCC-CCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAEL-KRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL-~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
....+.|+|.|. ...+|||.+.++ ..+++|..|.++||| ++|| ++||+|++|||.++.++++.+++.+++..+.
T Consensus 23 ~~~~~~v~l~k~-~~~~lG~~i~~~---~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 98 (113)
T 1va8_A 23 GETVKIVRIEKA-RDIPLGATVRNE---MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHG 98 (113)
T ss_dssp TEECEEEEEEEC-TTCCCCEEEEEC---SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCE
T ss_pred CCceEEEEEEeC-CCCceeEEEEeC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 346677999886 345899999876 358999999999999 8999 9999999999999999999999999988878
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|+|.|.+..
T Consensus 99 ~v~l~v~r~~~~ 110 (113)
T 1va8_A 99 TLTFVLIPSSGP 110 (113)
T ss_dssp EEEEEEECCCCC
T ss_pred eEEEEEEECCcc
Confidence 999999987753
No 99
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.55 E-value=2.2e-14 Score=108.85 Aligned_cols=87 Identities=21% Similarity=0.277 Sum_probs=74.4
Q ss_pred ceEEEEEecC--------CCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHH
Q psy12310 38 NTFTVVIKRP--------NRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 38 ~~~~V~L~r~--------~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~a 104 (201)
....+.|.+. +...+|||++.||.+. ..+++|..|.++||| .+| |++||+|++|||+++.+++|.++
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~ 106 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEV 106 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4456777764 3467899999999865 238999999999999 899 99999999999999999999999
Q ss_pred HHHHhCC--CCeEEEEEEeCCC
Q psy12310 105 TNFFQSS--DTSISLGIQRNPP 124 (201)
Q Consensus 105 v~~ik~~--g~~v~L~v~R~~~ 124 (201)
+.+++.. +..|.|+|.|.+.
T Consensus 107 ~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 107 YNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp HHHHHHTSSSSEEEEEEEEECS
T ss_pred HHHHHhcCCCCEEEEEEEcCCC
Confidence 9999875 4899999999764
No 100
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.55 E-value=2.5e-14 Score=104.83 Aligned_cols=86 Identities=22% Similarity=0.389 Sum_probs=74.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|.|.+. ...++||.+.+. ..+++|..|.++||| ++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 2 ~~~~v~L~k~-~~~glG~~i~~~---~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v 77 (106)
T 2la8_A 2 EKFNVDLMKK-AGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKV 77 (106)
T ss_dssp EEEEEEECCB-SSSTTCCEEEEC---SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCE
T ss_pred eEEEEEEEeC-CCCccCEEEEeC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Confidence 4678999854 457799998872 468999999999999 899 9999999999999999999999999999888889
Q ss_pred EEEEEeCCCCCc
Q psy12310 116 SLGIQRNPPGEK 127 (201)
Q Consensus 116 ~L~v~R~~~~~~ 127 (201)
.|+|.|.....+
T Consensus 78 ~l~v~R~~~~~~ 89 (106)
T 2la8_A 78 SMEVTRPKPGSG 89 (106)
T ss_dssp EEEEEECCSCSS
T ss_pred EEEEEeCCCCCC
Confidence 999999765533
No 101
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.55 E-value=1.9e-14 Score=104.70 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=74.1
Q ss_pred EEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Q psy12310 40 FTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLG 118 (201)
Q Consensus 40 ~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~ 118 (201)
+.|.|.|. .+.+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.+++|.+++.+++..+..+.|+
T Consensus 3 r~v~l~~~-~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 80 (106)
T 3ngh_A 3 RESKLSKQ-EGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 80 (106)
T ss_dssp EEEEEECC-TTCCCCCEEECCTT-CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEE
T ss_pred EEEEEEeC-CCCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 56888886 45789999998876 467999999999999 8999999999999999999999999999998789999999
Q ss_pred EEeCCC
Q psy12310 119 IQRNPP 124 (201)
Q Consensus 119 v~R~~~ 124 (201)
|.|.+.
T Consensus 81 v~r~~~ 86 (106)
T 3ngh_A 81 VLDGDS 86 (106)
T ss_dssp EECHHH
T ss_pred EEECCe
Confidence 998764
No 102
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.55 E-value=2.2e-14 Score=115.20 Aligned_cols=86 Identities=21% Similarity=0.409 Sum_probs=78.0
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...+.|.|.|. ...+|||++.||.+...+++|..|.+|||| .+||++||+|++|||.++.++++.+++.+++. +..+
T Consensus 83 ~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v 160 (192)
T 3k1r_A 83 RKLKEVRLDRL-HPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTV 160 (192)
T ss_dssp SSCEEEEEETT-STTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEE
T ss_pred CceEEEEEEeC-CCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeE
Confidence 35678999987 357899999999877778999999999999 89999999999999999999999999999988 8999
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|.+.
T Consensus 161 ~l~v~r~g~ 169 (192)
T 3k1r_A 161 SIKVRHIGL 169 (192)
T ss_dssp EEEEEECCE
T ss_pred EEEEEECCc
Confidence 999999874
No 103
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.55 E-value=1.3e-14 Score=104.20 Aligned_cols=83 Identities=27% Similarity=0.337 Sum_probs=71.2
Q ss_pred EEEEecCCCCceeEEEEEeecCC--C-----CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Q psy12310 41 TVVIKRPNRHHSWGLRIAGGCDL--D-----SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSD 112 (201)
Q Consensus 41 ~V~L~r~~~~~~~Gf~i~gG~~~--~-----~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g 112 (201)
+|+|.|. ..+|||++.++... . .+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+
T Consensus 5 ~v~l~~~--~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 82 (99)
T 3khf_A 5 PIVIHSS--GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSG 82 (99)
T ss_dssp CEEEEC---CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CEEEEeC--CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 5778774 47899999877532 1 25689999999999 8999999999999999999999999999999889
Q ss_pred CeEEEEEEeCCCC
Q psy12310 113 TSISLGIQRNPPG 125 (201)
Q Consensus 113 ~~v~L~v~R~~~~ 125 (201)
..+.|++.|.+..
T Consensus 83 ~~v~l~v~r~~~~ 95 (99)
T 3khf_A 83 NKISLRTTALENT 95 (99)
T ss_dssp SEEEEEEECSCSS
T ss_pred CEEEEEEEECCCc
Confidence 9999999997754
No 104
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=1.4e-14 Score=104.59 Aligned_cols=87 Identities=23% Similarity=0.374 Sum_probs=74.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+..+|.|.+.+...+|||.+.++.+...+++|..|.++||| .+||++||+|++|||.++.++.+.+++..++. +..+.
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~ 86 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKG-SKKLV 86 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSS-SSSCC
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcC-CCeEE
Confidence 45678888865678899999999877789999999999999 89999999999999999999999877766654 46889
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|++..
T Consensus 87 l~v~R~g~~ 95 (101)
T 1uez_A 87 LSVYSAGRI 95 (101)
T ss_dssp EEECCCCCC
T ss_pred EEEEECCcc
Confidence 999987653
No 105
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.54 E-value=1.1e-13 Score=101.32 Aligned_cols=88 Identities=18% Similarity=0.334 Sum_probs=75.7
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
..+.+.+.|.+. ..+|||++.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++.
T Consensus 9 ~~~~~~~~l~~~--~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (111)
T 2koj_A 9 VGKRLNIQLKKG--TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRS 86 (111)
T ss_dssp SCEEEEEEEECB--TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred cCcEEEEEEEEC--CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 346778888875 47899999987643 258999999999999 899 99999999999999999999999999986
Q ss_pred C--CCeEEEEEEeCCCC
Q psy12310 111 S--DTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~--g~~v~L~v~R~~~~ 125 (201)
. +..+.|+|.|++..
T Consensus 87 ~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 87 TKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp CCCSSEEEEEEEECCCC
T ss_pred CCCCCeEEEEEEeCCCC
Confidence 4 78999999998754
No 106
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.54 E-value=4.8e-14 Score=104.83 Aligned_cols=82 Identities=20% Similarity=0.311 Sum_probs=71.4
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC--CC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS--DT 113 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~--g~ 113 (201)
.+.++|+|.|. ..+|||+|.++.. +.+|.+|.+ +| .+||++||+|++|||.++.+++|.+++.+|+.. |.
T Consensus 11 ~~~~~V~L~Kg--~~G~GFsI~~~~~---g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~ 83 (113)
T 3soe_A 11 GLLVTIPLIKG--PKGFGFAIADSPT---GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGA 83 (113)
T ss_dssp CEEEEEEEECB--TTBSSEEEEEETT---EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTC
T ss_pred CCEEEEEEEEC--CCcccEEEeCCCC---CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 36789999995 4789999977643 567999988 57 899999999999999999999999999999864 78
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.|.|+|.|++..
T Consensus 84 ~v~L~V~R~g~~ 95 (113)
T 3soe_A 84 DVPLLILRGGPP 95 (113)
T ss_dssp EEEEEEEESSCC
T ss_pred EEEEEEEECCcc
Confidence 999999998864
No 107
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.54 E-value=1.1e-13 Score=98.56 Aligned_cols=81 Identities=23% Similarity=0.442 Sum_probs=70.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..++|.|.|.. .+|||.+.+. .+++|..|.++||| .+||++||+|++|||.++.++.+.+++..++ .+..+.
T Consensus 8 ~~r~v~l~~~~--~~~G~~l~~~----~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~ 80 (93)
T 2dls_A 8 VQRCVIIQKDQ--HGFGFTVSGD----RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVA 80 (93)
T ss_dssp CEEEEEEECSS--SSCCEEEECS----SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEE
T ss_pred CCEEEEEEeCC--CceeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEE
Confidence 45678898854 6799999863 57999999999999 8999999999999999999999998887776 589999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|++..
T Consensus 81 l~v~R~~~~ 89 (93)
T 2dls_A 81 LTLLGSSSG 89 (93)
T ss_dssp EEEECCCCC
T ss_pred EEEEECCCC
Confidence 999997653
No 108
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.54 E-value=4.3e-14 Score=100.64 Aligned_cols=85 Identities=18% Similarity=0.306 Sum_probs=74.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecC----CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCD----LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~----~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
+.++|.|.+. ..+|||.+.++.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..
T Consensus 4 ~~~~v~l~~~--~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 4 ETFDVELTKN--VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEECB--TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred EEEEEEEecC--CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4677888874 4779999998753 2468999999999999 899 999999999999999999999999888888
Q ss_pred CCeEEEEEEeCCC
Q psy12310 112 DTSISLGIQRNPP 124 (201)
Q Consensus 112 g~~v~L~v~R~~~ 124 (201)
+..+.|+|.|++.
T Consensus 82 ~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 82 GQTVLLTLMRRGE 94 (97)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCC
Confidence 9999999998763
No 109
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=5.3e-14 Score=101.66 Aligned_cols=87 Identities=26% Similarity=0.360 Sum_probs=72.9
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC---------CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL---------DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATN 106 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~---------~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~ 106 (201)
..++|.|.+. ....|||++.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..
T Consensus 4 dp~~v~l~~~-~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 4 QPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp SCEEEEECCC-C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEEeC-CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4578899876 456799999987542 247999999999999 899 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEEeCCCC
Q psy12310 107 FFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 107 ~ik~~g~~v~L~v~R~~~~ 125 (201)
+++..+..+.|+|.|....
T Consensus 83 ~l~~~~~~v~l~v~r~~~~ 101 (103)
T 2fcf_A 83 AIRKAGNPVVFMVQSIIST 101 (103)
T ss_dssp HHHTCCSSEEEEEECCCCC
T ss_pred HHHhCCCcEEEEEEECCCC
Confidence 9988877999999997653
No 110
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=104.90 Aligned_cols=86 Identities=12% Similarity=0.168 Sum_probs=75.5
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...++|.|.|. ..+|||.+.++.. ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 7 ~~~r~v~l~k~--~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 83 (106)
T 2eei_A 7 GQPRLCYLVKE--GGSYGFSLKTVQG-KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRV 83 (106)
T ss_dssp SSSEEEEEECC--SSSCSCCEECCSS-CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEE
T ss_pred CCCEEEEEEEC--CCCCCEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 35668999985 5789999988765 568999999999999 8999999999999999999999999998888778899
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|++.|.+..
T Consensus 84 ~l~v~r~~~~ 93 (106)
T 2eei_A 84 MFLLVDKETD 93 (106)
T ss_dssp EEEECCTTTS
T ss_pred EEEEEcCchh
Confidence 9999987654
No 111
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.54 E-value=5.4e-14 Score=98.91 Aligned_cols=83 Identities=20% Similarity=0.375 Sum_probs=69.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v 115 (201)
+.++|+|.|.. .+|||.+.++.+ ..+++|..+ ++|||.+||++||+|++|||.++.++++.+++.+++. .+..+
T Consensus 3 ~~~~v~l~k~~--~g~G~~~~~~~~-~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 78 (88)
T 3bpu_A 3 ELITVHIVKGP--MGFGFTIADSPG-GGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEV 78 (88)
T ss_dssp EEEEEEEECBT--TBSSCEEEECTT-SSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEE
T ss_pred cEEEEEEEcCC--CceeEEEEecCC-CCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEE
Confidence 57789999863 789999997755 457888876 9999978999999999999999999999999988874 48899
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|++.
T Consensus 79 ~l~v~R~g~ 87 (88)
T 3bpu_A 79 TLLVQRQTR 87 (88)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeCCc
Confidence 999999763
No 112
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.54 E-value=8.6e-14 Score=99.76 Aligned_cols=83 Identities=20% Similarity=0.332 Sum_probs=72.3
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
.+.++|.|.+. ...+|||++.+ ...+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..
T Consensus 7 ~~~~~v~l~~~-~~~glG~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~ 82 (96)
T 2qkv_A 7 LEKFNVDLMKK-AGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGK 82 (96)
T ss_dssp CCCEEEEEECB-TTBCCCEEEEE---CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CceEEEEEEeC-CCCCccEEEEe---CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 35778999764 35779999877 2368999999999999 899 999999999999999999999999899988889
Q ss_pred EEEEEEeCC
Q psy12310 115 ISLGIQRNP 123 (201)
Q Consensus 115 v~L~v~R~~ 123 (201)
+.|+|.|..
T Consensus 83 v~l~v~R~~ 91 (96)
T 2qkv_A 83 VSMEVTRPK 91 (96)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999999864
No 113
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.53 E-value=5.1e-14 Score=101.92 Aligned_cols=74 Identities=30% Similarity=0.470 Sum_probs=65.2
Q ss_pred CCceeEEEEEeecCC------------CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCe
Q psy12310 49 RHHSWGLRIAGGCDL------------DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTS 114 (201)
Q Consensus 49 ~~~~~Gf~i~gG~~~------------~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~ 114 (201)
...+|||++.||.+. ..+++|..|.++||| .+||++||+|++|||.++.+++|.+++..++.. +..
T Consensus 17 ~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 96 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEV 96 (104)
T ss_dssp TEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSE
T ss_pred CCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCE
Confidence 345799999988763 457999999999999 899999999999999999999999999999765 789
Q ss_pred EEEEEEeC
Q psy12310 115 ISLGIQRN 122 (201)
Q Consensus 115 v~L~v~R~ 122 (201)
+.|+|.|.
T Consensus 97 v~l~v~R~ 104 (104)
T 3sfj_A 97 VRLLVTRQ 104 (104)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999884
No 114
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.53 E-value=1.5e-14 Score=100.71 Aligned_cols=80 Identities=21% Similarity=0.424 Sum_probs=70.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.++|+|.|.. .+|||.+.++ .+++|..|.++||| .+||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 2 ~~r~v~l~~~~--~g~G~~~~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 75 (83)
T 2kv8_A 2 RVRSVEVARGR--AGYGFTLSGQ----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLH 75 (83)
T ss_dssp CEEEEEECCCS--SCCSCBCCCS----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEE
T ss_pred CcEEEEEEeCC--CcccEEEEcC----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 35689999864 7799998764 37999999999999 89999999999999999999999999999988778899
Q ss_pred EEEEeCC
Q psy12310 117 LGIQRNP 123 (201)
Q Consensus 117 L~v~R~~ 123 (201)
|+|.|+.
T Consensus 76 l~v~R~~ 82 (83)
T 2kv8_A 76 MVIAEGV 82 (83)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999863
No 115
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.53 E-value=6e-14 Score=111.31 Aligned_cols=86 Identities=30% Similarity=0.485 Sum_probs=77.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+...|+|.|.+ .+|||++.+|.+. ..+++|..|.++||| ++| |++||+|++|||.++.++++.+++.+++.
T Consensus 5 ~~~~v~l~~~~--~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 5 EYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEECBT--TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 56789999864 6799999999875 468999999999999 899 99999999999999999999999989998
Q ss_pred CCCeEEEEEEeCCCC
Q psy12310 111 SDTSISLGIQRNPPG 125 (201)
Q Consensus 111 ~g~~v~L~v~R~~~~ 125 (201)
.+..+.|++.|.+..
T Consensus 83 ~g~~v~l~v~r~~~~ 97 (196)
T 3gsl_A 83 AGSIVRLYVMRRKPP 97 (196)
T ss_dssp SCSEEEEEEEEECCC
T ss_pred CCCcEEEEEEecCCC
Confidence 899999999997744
No 116
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.53 E-value=1.3e-13 Score=103.02 Aligned_cols=92 Identities=17% Similarity=0.310 Sum_probs=77.1
Q ss_pred CCCCCCCCceEEEEEecCCCCceeEEEEEeecCC---CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHH
Q psy12310 30 GKPAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDA 104 (201)
Q Consensus 30 ~~~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~a 104 (201)
.+-..+..+.+.|.+.+. ..+|||.+.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++
T Consensus 22 ~y~~~~~~~~~~v~l~~~--~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~ 99 (121)
T 2kom_A 22 SYNTKKIGKRLNIQLKKG--TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEV 99 (121)
T ss_dssp CCCCCCSCEEEEEEEECC--TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHH
T ss_pred cccCccCCeEEEEEEEcC--CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 344444456788888875 46799999987643 258999999999999 899 99999999999999999999999
Q ss_pred HHHHhCC--CCeEEEEEEeCC
Q psy12310 105 TNFFQSS--DTSISLGIQRNP 123 (201)
Q Consensus 105 v~~ik~~--g~~v~L~v~R~~ 123 (201)
+.+++.. +..|.|+|.|++
T Consensus 100 ~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 100 VSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp HHHHHHCCSSCEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEEEEEeCC
Confidence 9888764 789999999975
No 117
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.52 E-value=7.6e-14 Score=103.54 Aligned_cols=84 Identities=27% Similarity=0.470 Sum_probs=74.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|+|.|.. .+|||++.++.+ ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 14 ~~~~v~l~k~~--~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 90 (119)
T 1tp5_A 14 EPRRIVIHRGS--TGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 90 (119)
T ss_dssp SCEEEEEECTT--SCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred ccEEEEEEECC--CCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 56789999864 669999999875 468999999999999 899 9999999999999999999999888888889999
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|++.|.+.
T Consensus 91 ~l~v~r~~~ 99 (119)
T 1tp5_A 91 TIIAQYKPE 99 (119)
T ss_dssp EEEEEECHH
T ss_pred EEEEEECCc
Confidence 999998753
No 118
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.52 E-value=1.2e-13 Score=102.44 Aligned_cols=85 Identities=16% Similarity=0.293 Sum_probs=73.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...+|+|.|. ....|||++.+|.+...+++|..|.++||| .+| |++||+|++|||.++.+.++.++..+++..+..+
T Consensus 24 ~~~~V~l~~~-~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v 102 (114)
T 2gzv_A 24 VPGKVTLQKD-AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 102 (114)
T ss_dssp CCEEEEEECC-TTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CCEEEEEEEC-CCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4568999886 456699999998876678999999999999 899 9999999999999998889999999998777789
Q ss_pred EEEEEeCC
Q psy12310 116 SLGIQRNP 123 (201)
Q Consensus 116 ~L~v~R~~ 123 (201)
.|+|.+..
T Consensus 103 ~l~v~~~~ 110 (114)
T 2gzv_A 103 TIHYNKLQ 110 (114)
T ss_dssp EEEEECCC
T ss_pred EEEEEecc
Confidence 99987643
No 119
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=3.4e-14 Score=104.24 Aligned_cols=89 Identities=22% Similarity=0.430 Sum_probs=77.8
Q ss_pred CCCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 33 AQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 33 ~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
.....+.+.|+|.|. ..+|||.+.++.+ ..+++|..|.++||| .+| |++||+|++|||+++.++++.+++.+++.
T Consensus 10 ~~~~~~~~~v~l~k~--~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~ 86 (113)
T 1um7_A 10 GGDAREPRKIILHKG--STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR 86 (113)
T ss_dssp CCCCCSEEEEEEECC--SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS
T ss_pred CcCCCceEEEEEEEC--CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 334457888999986 3789999998876 578999999999999 899 99999999999999999999999988988
Q ss_pred CCCeEEEEEEeCCC
Q psy12310 111 SDTSISLGIQRNPP 124 (201)
Q Consensus 111 ~g~~v~L~v~R~~~ 124 (201)
.+..+.|+|.|.+.
T Consensus 87 ~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 87 AGQSVTIVAQYRPE 100 (113)
T ss_dssp CCSEEEEEEECCHH
T ss_pred CCCcEEEEEEECcc
Confidence 88999999998653
No 120
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=4.7e-14 Score=101.87 Aligned_cols=89 Identities=20% Similarity=0.333 Sum_probs=74.9
Q ss_pred CCCCCCCCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHH
Q psy12310 30 GKPAQPHQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFF 108 (201)
Q Consensus 30 ~~~~~~~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~i 108 (201)
+.......+.+.++|.+. ..+|||.+.+. .+++|..|.++||| ++||++||+|++|||.++.++++.+++.++
T Consensus 7 ~~~~~~~~~~~~v~l~~~--~~g~G~~~~~~----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 80 (100)
T 1whd_A 7 GEGDPENGEKLQITIRRG--KDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEI 80 (100)
T ss_dssp TCSSCCCCEEEEEEEECC--SSSSSCBCCCS----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCccccceEEEEEECC--CCeeeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 333334457788999875 36799988764 57999999999999 899999999999999999999999999999
Q ss_pred hCCCCeEEEEEEeCCC
Q psy12310 109 QSSDTSISLGIQRNPP 124 (201)
Q Consensus 109 k~~g~~v~L~v~R~~~ 124 (201)
+..+..+.|+|.|...
T Consensus 81 ~~~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 81 RSCPSEIILLVWRVSG 96 (100)
T ss_dssp HHCSSEEEEEEEECCS
T ss_pred HcCCCeEEEEEEECCC
Confidence 8877789999999764
No 121
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=98.89 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=72.8
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc--ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC--
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA--AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-- 111 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA--~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-- 111 (201)
+.+.+.|.|.|.. .+|||+|.++. ...+||.+|.+||+| ...|++||.|++|||+++.+++|.+++++|+..
T Consensus 3 ~g~~k~V~l~K~~--~~LG~tI~~~g--~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 3 KGIEKEVNVYKSE--DSLGLTITDNG--VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp CEEEEEEEEECCS--SCCCEEEECSS--SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCeEEEEEEEECC--CCceEEEEcCC--CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 3467889999964 88999998642 246899999999999 467999999999999999999999999999875
Q ss_pred CCeEEEEEEeCCC
Q psy12310 112 DTSISLGIQRNPP 124 (201)
Q Consensus 112 g~~v~L~v~R~~~ 124 (201)
+..++|.+.+..+
T Consensus 79 g~~~~L~lv~p~~ 91 (95)
T 3gge_A 79 EELFTMKLIEPKK 91 (95)
T ss_dssp TCEEEEEEEEECS
T ss_pred CCEEEEEEECccc
Confidence 6789999887654
No 122
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.51 E-value=7.3e-14 Score=98.74 Aligned_cols=78 Identities=23% Similarity=0.389 Sum_probs=68.1
Q ss_pred EEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 40 FTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 40 ~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
+.|+|.+......|||.+.+ +++|.+|.++||| ++| |++||+|++|||.++.++++.+++.+++.++..+.|
T Consensus 2 l~v~l~~~~~~~~~G~~~~~------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGS------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEE------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred eEEEEEeCCCCCCCCEEEeC------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 35677765456789999976 5999999999999 888 999999999999999999999999999999889999
Q ss_pred EEEeCC
Q psy12310 118 GIQRNP 123 (201)
Q Consensus 118 ~v~R~~ 123 (201)
++.+..
T Consensus 76 ~v~~~~ 81 (88)
T 3e17_A 76 VVLRDL 81 (88)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 997654
No 123
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.51 E-value=1.5e-13 Score=105.28 Aligned_cols=90 Identities=27% Similarity=0.388 Sum_probs=74.6
Q ss_pred CCceEEEEEecCC--CCceeEEEEEeecCC------------CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCC
Q psy12310 36 HQNTFTVVIKRPN--RHHSWGLRIAGGCDL------------DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLR 100 (201)
Q Consensus 36 ~~~~~~V~L~r~~--~~~~~Gf~i~gG~~~------------~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~ 100 (201)
....++|.|.+.+ ...+|||++.+|.+. ..+++|..|.++||| ++||++||+|++|||.++.+++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~ 100 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVT 100 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCC
Confidence 3456778887642 234799999998752 368999999999999 8999999999999999999999
Q ss_pred HHHHHHHHhCC-CCeEEEEEEeCCCC
Q psy12310 101 HKDATNFFQSS-DTSISLGIQRNPPG 125 (201)
Q Consensus 101 ~~~av~~ik~~-g~~v~L~v~R~~~~ 125 (201)
+.++..+++.. |..+.|+|.|++..
T Consensus 101 ~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 101 HDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp HHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred HHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 99999999874 78999999998865
No 124
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=3.9e-13 Score=99.48 Aligned_cols=84 Identities=23% Similarity=0.296 Sum_probs=73.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.+.|.|.+.. .+|||.+.++.+ .+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+.
T Consensus 19 ~~~~v~l~~~~--~~lG~~~~~~~~--~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 19 EPRHVKVQKGS--EPLGISIVSGEK--GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCEEEEEECSS--CCCCEEEEECTT--SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred CCEEEEEEeCC--CCccEEEEccCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45678898853 789999998765 58999999999999 89999999999999999999999988877777789999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|++..
T Consensus 95 l~v~r~~~~ 103 (117)
T 1uit_A 95 ILAQYNPHV 103 (117)
T ss_dssp EEECCCSCC
T ss_pred EEEEECCch
Confidence 999998754
No 125
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.50 E-value=2.1e-13 Score=98.56 Aligned_cols=87 Identities=24% Similarity=0.291 Sum_probs=71.4
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecC--CCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhC-
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCD--LDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQS- 110 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~--~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~- 110 (201)
..+.+.|.+.|. .+.+|||++.+... ...+++|..|.++||| . ++|++||+|++|||.++.++++.++..+++.
T Consensus 7 ~~~~~~v~l~k~-~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 7 GDNCREVHLEKR-RGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp TCCCEEEEEECC-TTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CCceEEEEEEeC-CCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345677888876 34689999975321 1226999999999999 6 7799999999999999999999999999987
Q ss_pred -CCCeEEEEEEeCC
Q psy12310 111 -SDTSISLGIQRNP 123 (201)
Q Consensus 111 -~g~~v~L~v~R~~ 123 (201)
.+..|.|+|.|..
T Consensus 86 ~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 86 KSQTSVTLSIVHCP 99 (101)
T ss_dssp TTSSEEEEEECCCC
T ss_pred CCCCeEEEEEEeCC
Confidence 6889999998854
No 126
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=1.4e-13 Score=98.02 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=68.2
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
......+.+.++....+|||.+.+| +|..|.++||| ++||++||+|++|||.++.++++.++..+++..+..
T Consensus 9 ~~~~~~~~i~~~~~~~~lG~~~~~G-------~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 81 (90)
T 1y7n_A 9 MGNVTTVLIRRPDLRYQLGFSVQNG-------IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGE 81 (90)
T ss_dssp CSSCEEEEEEESSTTSCCCEEEETT-------EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEE
T ss_pred cCCcceEEEEeCCCccccCeEecCC-------EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3344556666665678899999653 89999999999 899999999999999999999999999999878899
Q ss_pred EEEEEEeC
Q psy12310 115 ISLGIQRN 122 (201)
Q Consensus 115 v~L~v~R~ 122 (201)
+.|+|.+.
T Consensus 82 v~l~v~p~ 89 (90)
T 1y7n_A 82 IHMKTMPA 89 (90)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 99998764
No 127
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=9.2e-14 Score=103.44 Aligned_cols=84 Identities=27% Similarity=0.358 Sum_probs=71.2
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCC-CCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhCC----
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLD-SPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQSS---- 111 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~-~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~~---- 111 (201)
...+.+.+. .+|||++.||.+.. .+++|.+|.++||| .+ ||++||+|++|||.++.+++|.+++.+++..
T Consensus 19 ~~~~~~~~~---~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~ 95 (118)
T 1v6b_A 19 VRLLRIKKE---GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG 95 (118)
T ss_dssp EEEEEEESC---SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred EEEEEECCC---CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcC
Confidence 445666654 47999999998653 35999999999999 77 9999999999999999999999999888754
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..|.|+|.|....
T Consensus 96 g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 96 GDWIDLVVAVCPPK 109 (118)
T ss_dssp CSEEEEEEECCCSC
T ss_pred CCeEEEEEEeCCcc
Confidence 78999999996543
No 128
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.50 E-value=1.9e-13 Score=100.62 Aligned_cols=85 Identities=28% Similarity=0.368 Sum_probs=72.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
...+|.+.+. +..+|||.+.++.+...+++|..|.+++|| .+||++||+|++|||.++.++.+.+++.+++.. ..+.
T Consensus 15 ~~~~v~~~~~-~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~ 92 (114)
T 1x5n_A 15 KEKKVFISLV-GSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLT 92 (114)
T ss_dssp SSEEEEECCC-SSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEE
T ss_pred CcEEEEEEEc-CCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEE
Confidence 4466777655 467899999999877789999999999999 899999999999999999999988888777755 6899
Q ss_pred EEEEeC-CC
Q psy12310 117 LGIQRN-PP 124 (201)
Q Consensus 117 L~v~R~-~~ 124 (201)
|+|.|+ +.
T Consensus 93 l~v~r~~g~ 101 (114)
T 1x5n_A 93 ISIVAAAGR 101 (114)
T ss_dssp EEECSSTTT
T ss_pred EEEEcCCCC
Confidence 999887 53
No 129
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.49 E-value=2.2e-13 Score=109.44 Aligned_cols=87 Identities=20% Similarity=0.403 Sum_probs=78.0
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-cc-CCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AA-ELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~a-gL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
...+.|.|.|. ...+|||++.+|.+...+++|..|.++||| .+ ||++||+|++|||+++.+++|.++..+++..+..
T Consensus 6 ~~~~~v~l~~~-~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 84 (200)
T 2qt5_A 6 KGSTVVELMKK-EGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGER 84 (200)
T ss_dssp EEEEEEEEECC-TTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred CCCEEEEEEeC-CCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 35667888775 468899999999887788999999999999 77 9999999999999999999999999999888999
Q ss_pred EEEEEEeCCC
Q psy12310 115 ISLGIQRNPP 124 (201)
Q Consensus 115 v~L~v~R~~~ 124 (201)
+.|+|.|++.
T Consensus 85 v~l~v~R~~~ 94 (200)
T 2qt5_A 85 VVLEVEYELP 94 (200)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEeccCC
Confidence 9999999763
No 130
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.49 E-value=1e-13 Score=100.26 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=70.8
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
.+.|.|.|. .+.++||.+....+ .+++|.+|.++||| ++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 13 ~~~v~l~K~-~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~ 89 (97)
T 2ejy_A 13 VRLIQFEKV-TEEPMGICLKLNEK--QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMIS 89 (97)
T ss_dssp CEEEEEEEC-SSSCCSEEEEECTT--CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEE
T ss_pred cEEEEEEeC-CCCCeeEEEEeCCC--CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 457888886 45789999987543 58999999999999 899 99999999999999999999999999988888999
Q ss_pred EEEEeC
Q psy12310 117 LGIQRN 122 (201)
Q Consensus 117 L~v~R~ 122 (201)
|+|.+.
T Consensus 90 L~V~~~ 95 (97)
T 2ejy_A 90 LKVIPN 95 (97)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 998864
No 131
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.48 E-value=6e-14 Score=103.56 Aligned_cols=86 Identities=19% Similarity=0.238 Sum_probs=75.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
..+++.|.+. ....|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+.
T Consensus 13 dp~~~~l~~~-~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 90 (114)
T 2edz_A 13 NPRECKLSKQ-EGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 90 (114)
T ss_dssp CCEEEEEECC-TTCCCSCEEECCTT-CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEeCC-CCCcccEEEEEecC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 5677888776 46789999988765 468999999999999 89999999999999999999999999999987899999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|++..
T Consensus 91 l~v~R~~~~ 99 (114)
T 2edz_A 91 LLVLDGDSY 99 (114)
T ss_dssp EEEECHHHH
T ss_pred EEEEECCcc
Confidence 999997643
No 132
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.48 E-value=2e-13 Score=102.51 Aligned_cols=86 Identities=27% Similarity=0.368 Sum_probs=73.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC---------CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHH
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL---------DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATN 106 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~---------~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~ 106 (201)
..++|.+.+. ....|||.+.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..
T Consensus 24 ~p~~v~l~k~-~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 24 QPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCEEEEECCC-TTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEEec-CCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4567888876 457899999886542 247999999999999 899 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEEeCCC
Q psy12310 107 FFQSSDTSISLGIQRNPP 124 (201)
Q Consensus 107 ~ik~~g~~v~L~v~R~~~ 124 (201)
+++..+..+.|+|.|...
T Consensus 103 ~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHCCSSEEEEEECCCC
T ss_pred HHHcCCCeEEEEEEECCc
Confidence 998887899999998764
No 133
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.48 E-value=7.9e-14 Score=99.95 Aligned_cols=82 Identities=20% Similarity=0.293 Sum_probs=70.1
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSIS 116 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v~ 116 (201)
...+.|.+. ..+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.++..+++.. +..+.
T Consensus 10 ~~~~~l~~~--~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (98)
T 2jxo_A 10 PRLCTMKKG--PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (98)
T ss_dssp CEEEEEECT--TTCCCEEEECCCS-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred cEEEEEEeC--CCcccEEEEecCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 456788885 3679999998765 458999999999999 899999999999999999999999999999877 45666
Q ss_pred EEEEeCC
Q psy12310 117 LGIQRNP 123 (201)
Q Consensus 117 L~v~R~~ 123 (201)
|+|.|++
T Consensus 87 l~v~R~g 93 (98)
T 2jxo_A 87 LVVDRET 93 (98)
T ss_dssp EECCHHH
T ss_pred EEEECCc
Confidence 8888765
No 134
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.48 E-value=2.9e-13 Score=99.25 Aligned_cols=85 Identities=22% Similarity=0.367 Sum_probs=74.1
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCC-CCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAEL-KRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSI 115 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL-~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v 115 (201)
.++|.|.+. ...+|||.+.++.+ ..+++|..|.++||| .+|| ++||+|++|||.++.++++.++..+++.. +..+
T Consensus 2 ~~~v~l~~~-~~~glG~~~~~~~~-~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 79 (112)
T 1qau_A 2 VISVRLFKR-KVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETH 79 (112)
T ss_dssp EEEEEEECB-TTTBTSEEEEECSS-SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSE
T ss_pred EEEEEEEcC-CCCceeEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcE
Confidence 467888775 45789999998765 468999999999999 8998 99999999999999999999999888764 7899
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|++.|++..
T Consensus 80 ~l~v~R~g~~ 89 (112)
T 1qau_A 80 VVLILRGPEG 89 (112)
T ss_dssp EEEEEECCTT
T ss_pred EEEEEeCCcc
Confidence 9999998865
No 135
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.47 E-value=3.7e-13 Score=108.20 Aligned_cols=88 Identities=24% Similarity=0.345 Sum_probs=77.4
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCC--CCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCC--CCHHHHHHHHhC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLD--SPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRD--LRHKDATNFFQS 110 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~--~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~--~~~~~av~~ik~ 110 (201)
.+.+.|.|.+. ..+|||++.+|.+.. .+++|..|.++||| ++| |++||+|++|||+++.+ ++|.+++.+++.
T Consensus 17 ~~~~~v~~~~~--~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 94 (206)
T 3r0h_A 17 NKKILIELKVE--KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT 94 (206)
T ss_dssp TSCEEEEEECT--TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS
T ss_pred CCEEEEEEEeC--CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh
Confidence 45678999885 478999999998754 37999999999999 887 99999999999999999 999999999998
Q ss_pred CCCe-EEEEEEeCCCCC
Q psy12310 111 SDTS-ISLGIQRNPPGE 126 (201)
Q Consensus 111 ~g~~-v~L~v~R~~~~~ 126 (201)
.+.. +.|+|.|.+...
T Consensus 95 ~~~~~v~l~v~R~~~~~ 111 (206)
T 3r0h_A 95 TYEKAVTLTVFRADPPE 111 (206)
T ss_dssp CCSSEEEEEEECCSSCC
T ss_pred cCCCceEEEEEecccCC
Confidence 8777 999999987653
No 136
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.20 E-value=3.9e-15 Score=110.22 Aligned_cols=83 Identities=28% Similarity=0.520 Sum_probs=72.8
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-c-cCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-A-AELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~-agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..++|.|.|. ...+|||++.+|.+...+++|..|.++||| + +||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 27 ~~~~v~l~k~-~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v 105 (112)
T 2lob_A 27 GIRKVLLLKE-DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 105 (112)
Confidence 4567888876 457899999999887778999999999999 7 899999999999999999999999999998887778
Q ss_pred EEEEEe
Q psy12310 116 SLGIQR 121 (201)
Q Consensus 116 ~L~v~R 121 (201)
.|+|.+
T Consensus 106 ~l~V~~ 111 (112)
T 2lob_A 106 EFEVVY 111 (112)
Confidence 887753
No 137
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=97.92 Aligned_cols=81 Identities=19% Similarity=0.303 Sum_probs=69.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..+.|.|.|. ...+|||++.+. ..+++|..|.++||| ++| |++||+|++|||.++ +.++.++..+++..+..+
T Consensus 6 ~~r~v~l~k~-~~~~lG~~i~~~---~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v 80 (91)
T 2e7k_A 6 SGRMVGIRKT-AGEHLGVTFRVE---GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSV 80 (91)
T ss_dssp CSCBCCBCCC-TTCCCCEEEEES---SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSB
T ss_pred CcEEEEEEEC-CCCcEeEEEEec---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeE
Confidence 3456888765 457899999873 468999999999999 765 999999999999999 889999999999888899
Q ss_pred EEEEEeCC
Q psy12310 116 SLGIQRNP 123 (201)
Q Consensus 116 ~L~v~R~~ 123 (201)
.|+|.|..
T Consensus 81 ~l~v~~~~ 88 (91)
T 2e7k_A 81 ILKILSGP 88 (91)
T ss_dssp CEEEECCS
T ss_pred EEEEEECC
Confidence 99998754
No 138
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.47 E-value=2.3e-13 Score=108.63 Aligned_cols=74 Identities=30% Similarity=0.470 Sum_probs=66.9
Q ss_pred ceeEEEEEeecC--------CCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEe
Q psy12310 51 HSWGLRIAGGCD--------LDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQR 121 (201)
Q Consensus 51 ~~~Gf~i~gG~~--------~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R 121 (201)
.+|||+|.||.+ ...+++|..|.++||| + ||++||+|++|||.++.+++|.+++.+++..+..|.|+|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 569999999874 3568999999999999 8 99999999999999999999999999999888899999999
Q ss_pred ---CCCC
Q psy12310 122 ---NPPG 125 (201)
Q Consensus 122 ---~~~~ 125 (201)
++..
T Consensus 81 ~~~~G~~ 87 (195)
T 2qbw_A 81 EVGNGAK 87 (195)
T ss_dssp ECSSSCE
T ss_pred cCCCCCC
Confidence 5543
No 139
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=1.1e-12 Score=98.57 Aligned_cols=86 Identities=27% Similarity=0.343 Sum_probs=72.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSIS 116 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~ 116 (201)
+.+++.+... ....|||.+.++.++..+++|..|.++||| .+||++||+|++|||.++.++++.+++..++. +..+.
T Consensus 20 ~~~~v~v~~~-~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 20 DEKKVNLVLG-DGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLI 97 (128)
T ss_dssp SEEEEEEECC-SSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEE
T ss_pred cEEEEEEEEC-CCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEE
Confidence 4455555543 236799999998877779999999999999 89999999999999999999999888877766 47999
Q ss_pred EEEEeCCCC
Q psy12310 117 LGIQRNPPG 125 (201)
Q Consensus 117 L~v~R~~~~ 125 (201)
|+|.|.+..
T Consensus 98 l~v~R~g~~ 106 (128)
T 1uf1_A 98 LTVKDVGRL 106 (128)
T ss_dssp EEEECCSCC
T ss_pred EEEEECCcc
Confidence 999998865
No 140
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.46 E-value=3.8e-13 Score=99.24 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=68.9
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC-eEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT-SIS 116 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~-~v~ 116 (201)
.++|.|.|. ..+|||.+.+. .+++|..|.++||| ++||++||+|++|||.++.++++.++..+++..+. .+.
T Consensus 24 ~r~v~l~k~--~~~~G~~l~~~----~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~ 97 (109)
T 2vsv_A 24 PRSIRFTAE--EGDLGFTLRGN----APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIE 97 (109)
T ss_dssp CEEEEECCG--GGCCCEEEESS----SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEE
T ss_pred CEEEEEEeC--CCceeEEEeCC----CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 467999885 47899999753 47899999999999 89999999999999999999999999999988755 599
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|...
T Consensus 98 l~V~~~~~ 105 (109)
T 2vsv_A 98 MKVVSLLD 105 (109)
T ss_dssp EEEESCC-
T ss_pred EEEEECCC
Confidence 99988653
No 141
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1e-12 Score=94.27 Aligned_cols=83 Identities=19% Similarity=0.325 Sum_probs=70.1
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC--CCe
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS--DTS 114 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~--g~~ 114 (201)
.+.+++.|.+. ..+|||.+..... +++|..|.++ ++.+||++||+|++|||.++.+++|.+++.+++.. +..
T Consensus 9 ~~~~~v~l~~~--~~g~G~~i~~~~~---Gv~V~~v~~~-a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 82 (96)
T 1ujv_A 9 AELMTLTIVKG--AQGFGFTIADSPT---GQRVKQILDI-QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSE 82 (96)
T ss_dssp CCCEEEEEECC--SSSSSEEEEEETT---EEEEEEESCG-GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSE
T ss_pred ceEEEEEEEeC--CCceeEEEEcCCC---CEEEEEEecc-cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence 35778999885 4789999976543 6899999984 33999999999999999999999999999999873 789
Q ss_pred EEEEEEeCCCC
Q psy12310 115 ISLGIQRNPPG 125 (201)
Q Consensus 115 v~L~v~R~~~~ 125 (201)
+.|+|.|++..
T Consensus 83 v~l~v~R~g~~ 93 (96)
T 1ujv_A 83 TSLIIHRGSGP 93 (96)
T ss_dssp EEEEEECCSSC
T ss_pred EEEEEEECCCC
Confidence 99999998753
No 142
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.45 E-value=2.4e-13 Score=98.58 Aligned_cols=80 Identities=20% Similarity=0.410 Sum_probs=67.8
Q ss_pred eEEEEEecCCCCceeEEEEEee-------cCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGG-------CDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG-------~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
...+.|.|. ...+|||.+.+. .+...+++|..|.++||| .+||++||+|++|||.++.++++.++..+++.
T Consensus 16 ~~~v~l~~~-~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 16 RKLVTVEKQ-DNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CCEEEEECC-TTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEeC-CCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 446778886 356899999983 233568999999999999 89999999999999999999999999999988
Q ss_pred CCCeEEEEE
Q psy12310 111 SDTSISLGI 119 (201)
Q Consensus 111 ~g~~v~L~v 119 (201)
.+..+.|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 766887765
No 143
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=4.6e-14 Score=106.13 Aligned_cols=85 Identities=26% Similarity=0.343 Sum_probs=72.4
Q ss_pred eEEEEEecCCCCceeEEEEEeec-----------------------C-----CCCCcEEEEECCCCcc-ccCCCCCCEEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGC-----------------------D-----LDSPIVITKVYPGTPA-AAELKRGDIIR 89 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~-----------------------~-----~~~pi~V~~V~~gspA-~agL~~GD~Il 89 (201)
.++|+|.|.. .+|||+|.+.. . ...+++|..|.++||| .+||++||+|+
T Consensus 9 ~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~ 86 (126)
T 2yuy_A 9 PKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRII 86 (126)
T ss_dssp CCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCCC
T ss_pred CEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEEE
Confidence 4468998864 67999997521 1 1256999999999999 89999999999
Q ss_pred EECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 90 KIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 90 ~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
+|||.++.++++.+++.+++..+..|.|+|.|.+..
T Consensus 87 ~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 87 KVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSG 122 (126)
T ss_dssp EETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCC
T ss_pred EECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 999999999999999999998899999999987653
No 144
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6.7e-13 Score=98.59 Aligned_cols=88 Identities=18% Similarity=0.266 Sum_probs=73.2
Q ss_pred CCCceEEEEEecCCCC-ceeEEEEEeecCCC-CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 35 PHQNTFTVVIKRPNRH-HSWGLRIAGGCDLD-SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 35 ~~~~~~~V~L~r~~~~-~~~Gf~i~gG~~~~-~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
.....+.|.|.|.+.. .+|||++.++.+.. .+++|..|.++||| ++||++||+|++|||.++.++++.++..+++.
T Consensus 12 ~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 12 CPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp SCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred ccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 3446788999987432 27999998865432 57999999999999 99999999999999999999988888888875
Q ss_pred CCeEEEEEEeCCC
Q psy12310 112 DTSISLGIQRNPP 124 (201)
Q Consensus 112 g~~v~L~v~R~~~ 124 (201)
..+.|+|.|...
T Consensus 91 -~~v~l~v~R~p~ 102 (114)
T 2d8i_A 91 -PSLGLLVRTYPE 102 (114)
T ss_dssp -SEEEEEEEECCC
T ss_pred -CcEEEEEEECCC
Confidence 489999998754
No 145
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=92.50 Aligned_cols=82 Identities=21% Similarity=0.415 Sum_probs=68.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
+.++|.+.++.....|||.+. .+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 2 ~~~~v~~~~~~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 75 (92)
T 3cyy_A 2 KPTKVTLVKSAKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKL 75 (92)
T ss_dssp CCEEEEEECSSTTSCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CcEEEEEEeCCCCCCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 356777777656678999876 35999999999999 899 9999999999999999999999999998887799
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|++..
T Consensus 76 ~l~v~r~g~~ 85 (92)
T 3cyy_A 76 KMVVQRDERA 85 (92)
T ss_dssp EEEEEC----
T ss_pred EEEEEeCCce
Confidence 9999997754
No 146
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.42 E-value=8.2e-13 Score=99.03 Aligned_cols=85 Identities=19% Similarity=0.278 Sum_probs=73.0
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v 115 (201)
..+.|.|.+. ..+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.++..+++.. +..+
T Consensus 9 ~~r~v~l~~~--~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (128)
T 2kjd_A 9 RPRLCTMKKG--PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (128)
T ss_dssp CCEEEEEECC--SSSCCEEEEECSS-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred CcEEEEEecC--CCcccEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 4567888885 3679999998775 458999999999999 899999999999999999999999999999876 5677
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|++.|++..
T Consensus 86 ~l~v~R~g~~ 95 (128)
T 2kjd_A 86 LLVVDRETDE 95 (128)
T ss_dssp EEEECHHHHH
T ss_pred EEEEEeCCcc
Confidence 7999887643
No 147
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.41 E-value=1.2e-12 Score=104.91 Aligned_cols=89 Identities=22% Similarity=0.388 Sum_probs=77.8
Q ss_pred CCceEEEEEecCCCCceeEEEEEeecCC----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 36 HQNTFTVVIKRPNRHHSWGLRIAGGCDL----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 36 ~~~~~~V~L~r~~~~~~~Gf~i~gG~~~----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
..+.++|.|.|. ...+|||++.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++
T Consensus 4 ~~~~~~v~l~~~-~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 4 HTETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp CCEEEEEEEECB-TTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred ccEEEEEEEEeC-CCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 447888999986 468899999998542 457999999999999 899 9999999999999999988999998998
Q ss_pred CC--CCeEEEEEEeCCCC
Q psy12310 110 SS--DTSISLGIQRNPPG 125 (201)
Q Consensus 110 ~~--g~~v~L~v~R~~~~ 125 (201)
.. +..+.|+|.|++..
T Consensus 83 ~~~~g~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 83 DSSITSKVTLEIEFDVAE 100 (196)
T ss_dssp TCCSSSEEEEEEEECSCS
T ss_pred hCCCCCeEEEEEEecCCC
Confidence 76 78999999998754
No 148
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.40 E-value=2.3e-12 Score=96.84 Aligned_cols=73 Identities=27% Similarity=0.458 Sum_probs=65.5
Q ss_pred CceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCC
Q psy12310 50 HHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPP 124 (201)
Q Consensus 50 ~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~ 124 (201)
..+|||.+.+|.+ .+++|..|.++||| .+||++||+|++|||.++.++++.+++..++ ..+..+.|+|.|.+.
T Consensus 38 ~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 38 GDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp SSCCCEEEEECTT--SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHH
T ss_pred CCceeEEEecCCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 3679999998766 68999999999999 8999999999999999999999999888776 468999999999764
No 149
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.40 E-value=1.2e-12 Score=98.15 Aligned_cols=87 Identities=23% Similarity=0.372 Sum_probs=75.4
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCC-CCCCEEEEECCEECCCCCHHHHHHHHhCC-CC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAEL-KRGDIIRKIGDYDSRDLRHKDATNFFQSS-DT 113 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL-~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~ 113 (201)
.+.+.|.|.+. ...+|||.+.++.+ ..+++|..|.++||| .+|| ++||+|++|||.++.++++.++..+++.. +.
T Consensus 7 ~~~~~v~l~~~-~~~glG~~~~~~~~-~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 84 (127)
T 1b8q_A 7 PNVISVRLFKR-KVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 84 (127)
T ss_dssp CCSEEEEEECT-TTSCCSCCEEECTT-SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSS
T ss_pred CceEEEEEEeC-CCCcEeEEEEecCC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 35678899875 34789999988664 468999999999999 8998 99999999999999999999999999865 78
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|++.|++..
T Consensus 85 ~v~l~v~R~g~~ 96 (127)
T 1b8q_A 85 THVVLILRGPEG 96 (127)
T ss_dssp CEEEEEECCCCS
T ss_pred eEEEEEEeCCce
Confidence 999999998865
No 150
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.38 E-value=3.2e-12 Score=101.24 Aligned_cols=87 Identities=23% Similarity=0.386 Sum_probs=75.1
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQ 109 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik 109 (201)
...+++.+.+.. .+|||.+.++.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.+++.+++
T Consensus 99 ~~~~~v~l~~~~--~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 176 (196)
T 3gsl_A 99 EKVMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 176 (196)
T ss_dssp EEEEEEEEEEBT--TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHH
T ss_pred cccEEEEEecCC--CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHH
Confidence 356677777753 5799999987653 247999999999999 888 9999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCCCC
Q psy12310 110 SSDTSISLGIQRNPPG 125 (201)
Q Consensus 110 ~~g~~v~L~v~R~~~~ 125 (201)
.++..+.|+|.|++..
T Consensus 177 ~~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 177 NTYDVVYLKVAKPSNA 192 (196)
T ss_dssp SCCEEEEEEEEEESCC
T ss_pred cCCCeEEEEEeCCCCc
Confidence 8899999999998754
No 151
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.38 E-value=3.5e-12 Score=91.74 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=66.1
Q ss_pred ceEEEEEecCCC-CceeEEEEEeecCC-CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Q psy12310 38 NTFTVVIKRPNR-HHSWGLRIAGGCDL-DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTS 114 (201)
Q Consensus 38 ~~~~V~L~r~~~-~~~~Gf~i~gG~~~-~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~ 114 (201)
..+.|.|.|.+. ..+|||++.++.+. ..+++|..|.++||| ++||++||+|++|||.++.++++.+...+++ ...
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~--~~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS--QPS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH--SSE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCe
Confidence 466788888642 34799999886532 357999999999999 9999999999999999999999999988887 356
Q ss_pred EEEEEEe
Q psy12310 115 ISLGIQR 121 (201)
Q Consensus 115 v~L~v~R 121 (201)
+.|+|..
T Consensus 84 l~ltV~~ 90 (94)
T 3kzd_A 84 LGLLVRT 90 (94)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888765
No 152
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.37 E-value=6e-12 Score=86.35 Aligned_cols=76 Identities=21% Similarity=0.449 Sum_probs=63.0
Q ss_pred EEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Q psy12310 42 VVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGI 119 (201)
Q Consensus 42 V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v 119 (201)
+....+.....|||.+.+ +++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..+..+.|+|
T Consensus 4 ~~~~~~~~~~~~g~~~~~------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 4 VTLVKSRKNEEYGLRLAS------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp EEEECCSTTCCCCEEEEE------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred EEEEECCCCCCCCEEEeC------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 333333356789998863 4899999999999 899 99999999999999999999999999987767999999
Q ss_pred EeCC
Q psy12310 120 QRNP 123 (201)
Q Consensus 120 ~R~~ 123 (201)
.|++
T Consensus 78 ~R~g 81 (81)
T 2rcz_A 78 QRDE 81 (81)
T ss_dssp EC--
T ss_pred EeCC
Confidence 8853
No 153
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=3.2e-12 Score=96.63 Aligned_cols=80 Identities=14% Similarity=0.235 Sum_probs=70.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--CCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDT 113 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~ 113 (201)
..+.+.|.+. ..+|||.+.+. ..+++|..|.++||| ++| |++||+|++|||.++.+.++.+++.+++. .|.
T Consensus 27 ~~~~~~l~k~--~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 27 KVIQTKLTVG--NLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGT 101 (126)
T ss_dssp CEEEEEEECC--TTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSC
T ss_pred ceEEEEEecC--CceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Confidence 5677888874 47799999874 347899999999999 899 99999999999999999999999999987 488
Q ss_pred eEEEEEEeC
Q psy12310 114 SISLGIQRN 122 (201)
Q Consensus 114 ~v~L~v~R~ 122 (201)
.|.|+|.|+
T Consensus 102 ~v~l~V~R~ 110 (126)
T 1wif_A 102 VLQIKAYRG 110 (126)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEEEC
Confidence 999999997
No 154
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.35 E-value=4.2e-12 Score=89.36 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=65.7
Q ss_pred eEEEEEecC-CCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCe
Q psy12310 39 TFTVVIKRP-NRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTS 114 (201)
Q Consensus 39 ~~~V~L~r~-~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~ 114 (201)
.+.+.+.+. +....|||.+... ..+++|..|.++||| .+||++||+|++|||.++.+.++.+...+++. .+..
T Consensus 4 ~~~~~~~~~~~~~~~lG~~~~~~---~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~ 80 (90)
T 2eaq_A 4 DMRISINQTPGKSLDFGFTIKWD---IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGH 80 (90)
T ss_dssp EEEEEEECCTTCSSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTE
T ss_pred ceEEEEEecCCCCCcccEEEEec---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCE
Confidence 345666543 2334799998754 247999999999999 89999999999999999977778888777764 4889
Q ss_pred EEEEEEeCC
Q psy12310 115 ISLGIQRNP 123 (201)
Q Consensus 115 v~L~v~R~~ 123 (201)
+.|+|.|++
T Consensus 81 v~l~v~R~g 89 (90)
T 2eaq_A 81 LVMDVRRYG 89 (90)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999999975
No 155
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.33 E-value=3.9e-12 Score=120.53 Aligned_cols=85 Identities=31% Similarity=0.497 Sum_probs=77.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC-----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL-----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQS 110 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~-----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~ 110 (201)
+.++|.|.|.. .+|||+|.||.+. ..+++|..|.+|||| .+| |++||+|++|||.++.+++|.+++.+++.
T Consensus 59 ~~~~v~l~k~~--~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 136 (721)
T 2xkx_A 59 EYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 136 (721)
T ss_pred eEEEEEEEeCC--CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 56789999864 6899999999874 568999999999999 888 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCC
Q psy12310 111 SDTSISLGIQRNPP 124 (201)
Q Consensus 111 ~g~~v~L~v~R~~~ 124 (201)
++..|.|+|.|.+.
T Consensus 137 ~g~~v~l~v~R~~~ 150 (721)
T 2xkx_A 137 AGSIVRLYVMRRKP 150 (721)
T ss_pred cccccceEEEeccc
Confidence 89999999999874
No 156
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.32 E-value=1.4e-11 Score=98.91 Aligned_cols=84 Identities=21% Similarity=0.349 Sum_probs=71.9
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..+++.+.+. ....|||.+.++. .+++|..|.++||| .+| |++||+|++|||+++.++++.+++.+++..+..+
T Consensus 113 ~~~~v~l~~~-~~~~lG~~~~~~~---~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 188 (206)
T 3r0h_A 113 EKFNVDLMKK-AGKELGLSLSPNE---IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKV 188 (206)
T ss_dssp EEEEEEEECC-TTCCCCEEEEECS---SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred cEEEEEEecC-CCCccCeEEEcCC---ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4667777664 3467999998653 47999999999999 888 9999999999999999999999999999888999
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|....
T Consensus 189 ~L~V~R~~~~ 198 (206)
T 3r0h_A 189 SMEVTRPKPT 198 (206)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEeCCCC
Confidence 9999996643
No 157
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.31 E-value=5.1e-12 Score=114.39 Aligned_cols=82 Identities=26% Similarity=0.406 Sum_probs=73.8
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSI 115 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v 115 (201)
.+.|++.+. .+|||.+.||.+ .+++|.+|.+|||| .+||++||+|++|||.++.++++.+++.+|+. .|..|
T Consensus 2 ~r~V~l~k~---~~lG~~i~gg~~--~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v 76 (468)
T 3shw_A 2 MKLVKFRKG---DSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 76 (468)
T ss_dssp EEEEEEECC---SSCCEEEEEETT--TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred ceEEEEecC---CccceEEEccCc--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 456888874 779999999976 68999999999999 89999999999999999999999999999987 68999
Q ss_pred EEEEEeCCCC
Q psy12310 116 SLGIQRNPPG 125 (201)
Q Consensus 116 ~L~v~R~~~~ 125 (201)
.|+|.|.+..
T Consensus 77 ~L~V~r~g~~ 86 (468)
T 3shw_A 77 TILAQKKKDV 86 (468)
T ss_dssp EEEEEECHHH
T ss_pred EEEEEECCcc
Confidence 9999997643
No 158
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.30 E-value=8.3e-12 Score=110.70 Aligned_cols=84 Identities=25% Similarity=0.399 Sum_probs=73.8
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCC
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDT 113 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~ 113 (201)
.....|.+.+. .+|||++.||.+ .+++|..|.+|||| .+||++||+|++|||.++.++++.+++.+++. .|.
T Consensus 8 ~~~~~v~~~k~---~~lG~~i~gg~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 8 PSMKLVKFRKG---DSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 82 (391)
T ss_dssp -CEEEEEEECC---SSCCEEEEEETT--TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred CCcEEEEeecC---CceeEEEEecCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCC
Confidence 34567788765 469999999876 78999999999999 89999999999999999999999999999984 689
Q ss_pred eEEEEEEeCCCC
Q psy12310 114 SISLGIQRNPPG 125 (201)
Q Consensus 114 ~v~L~v~R~~~~ 125 (201)
.+.|+|.|++..
T Consensus 83 ~v~l~v~r~~~~ 94 (391)
T 3tsz_A 83 EVTILAQKKKDV 94 (391)
T ss_dssp EEEEEEEECHHH
T ss_pred eEEEEEeeCCcc
Confidence 999999998653
No 159
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.29 E-value=2.4e-11 Score=90.58 Aligned_cols=88 Identities=16% Similarity=0.320 Sum_probs=68.9
Q ss_pred EEEEEecC--CCCceeEEEEEeec---CCCCCcEEEEECC--CCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 40 FTVVIKRP--NRHHSWGLRIAGGC---DLDSPIVITKVYP--GTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 40 ~~V~L~r~--~~~~~~Gf~i~gG~---~~~~pi~V~~V~~--gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
.+|+|.+. .....|||.+.... +...+++|..|.+ ++|| ++||++||+|++|||.++.++++.+...+++..
T Consensus 14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 14 YSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp CEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred ceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 34555541 12345777776442 2346899999999 9999 899999999999999999999888888888876
Q ss_pred CCeEEEEEEeCCCCCc
Q psy12310 112 DTSISLGIQRNPPGEK 127 (201)
Q Consensus 112 g~~v~L~v~R~~~~~~ 127 (201)
+..+.|+|.|++....
T Consensus 94 g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 94 SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp SSCEEEEEEECSSCCC
T ss_pred CCEEEEEEEECCEEEe
Confidence 7899999999886543
No 160
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=2.2e-12 Score=95.27 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=67.9
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSIS 116 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v~ 116 (201)
.++|.|.|. ..+|||.+.++ .+++|..|.+++|| .+||++||+|++|||.++.++++.++..+++.. +..+.
T Consensus 16 ~r~v~l~~~--~~~~G~~l~~~----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~ 89 (111)
T 1vae_A 16 PRGIHFTVE--EGDLGFTLRGN----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVE 89 (111)
T ss_dssp CCCCCEECC--SSCCSCCEESS----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEEC
T ss_pred CeEEEEEcC--CCcccEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEE
Confidence 456788874 47899999764 46899999999999 899999999999999999988999999999876 45699
Q ss_pred EEEEeCCC
Q psy12310 117 LGIQRNPP 124 (201)
Q Consensus 117 L~v~R~~~ 124 (201)
|+|.|...
T Consensus 90 l~V~~~~~ 97 (111)
T 1vae_A 90 MKVVSLLD 97 (111)
T ss_dssp EEEECEEC
T ss_pred EEEEecCC
Confidence 99987643
No 161
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=99.28 E-value=2.4e-11 Score=107.31 Aligned_cols=141 Identities=15% Similarity=0.216 Sum_probs=97.4
Q ss_pred CceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEeCCCC-C
Q psy12310 50 HHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSISLGIQRNPPG-E 126 (201)
Q Consensus 50 ~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v~L~v~R~~~~-~ 126 (201)
..++|+.+..-.....+++|..|.++||| ++||++||+|++|||.++.++...++..+++.. |..|.|+|.|.+.. .
T Consensus 84 ~~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~ 163 (388)
T 1fc6_A 84 VTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGAPSN 163 (388)
T ss_dssp CBBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTEEEE
T ss_pred eEEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcc
Confidence 35678887643111357999999999999 999999999999999999999888888888755 88999999998752 1
Q ss_pred ccccccccCCCCCCCCccccccccccccccccccccccccCCcccccc--cccCCCcccchHHHHHHHHHhcC
Q psy12310 127 KKAASGSRSVTPLPIVDYCQKESKASSASMSVVNSFHDFLDHQHVHRA--QAVASPFELSSEHDLNYVIKEQL 197 (201)
Q Consensus 127 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ig~~--~qf~~p~~~~s~~~i~~~~~~~~ 197 (201)
.......|.....+++.+.... ... ...+.....+.+|||+ .+|+........+++++|.++++
T Consensus 164 ~~~~~l~r~~i~~~~v~~~~~~---~~~----~~~~~~~~~~~~igYi~i~~F~~~~~~~~~~~l~~l~~~~~ 229 (388)
T 1fc6_A 164 TRTLQLTRQKVTINPVTFTTCS---NVA----AAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGV 229 (388)
T ss_dssp EEEEEEECBCCCCCCEEEEEEC---SCC----GGGSCTTCSSSCEEEEEECCBSTTHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEEEceeecCceeeeeec---ccc----ccccccccCCCCEEEEEeCccCcchHHHHHHHHHHHHhCCC
Confidence 2333344444444444331110 000 0011112345689997 89988877788899999887765
No 162
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.27 E-value=3.1e-12 Score=105.05 Aligned_cols=85 Identities=18% Similarity=0.258 Sum_probs=73.0
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
...+.|+|.+. ..+|||.+.++.+ ..+++|..|.++||| .+||++||+|++|||.++.++++.+++.+++..+..+
T Consensus 8 ~~~r~v~l~k~--~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v 84 (216)
T 2krg_A 8 LRPRLCTMKKG--PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (216)
T ss_dssp CCCEEEEEECC--SSSSCEEECCCSS-SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEE
T ss_pred cceEEEEEEeC--CCCceEEEEecCC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 35667888885 3679999988765 458999999999999 8999999999999999999889999998887668888
Q ss_pred -EEEEEeCCC
Q psy12310 116 -SLGIQRNPP 124 (201)
Q Consensus 116 -~L~v~R~~~ 124 (201)
.|+|.|++.
T Consensus 85 ~~l~V~R~g~ 94 (216)
T 2krg_A 85 KLLVVDRETD 94 (216)
T ss_dssp EEEECCHHHH
T ss_pred EEEEEEECCE
Confidence 888888664
No 163
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.25 E-value=2.8e-11 Score=96.98 Aligned_cols=85 Identities=26% Similarity=0.435 Sum_probs=73.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC----CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL----DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~----~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~ 111 (201)
..+.|++.+. ..+|||.+.+|.+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..
T Consensus 106 ~~~~v~l~~~--~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 183 (200)
T 2qt5_A 106 RTVEVTLHKE--GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 183 (200)
T ss_dssp EEEEEEEECB--TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred eEEEEEEecC--CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567777664 47799999988653 357899999999999 899 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCC
Q psy12310 112 DTSISLGIQRNPP 124 (201)
Q Consensus 112 g~~v~L~v~R~~~ 124 (201)
+..+.|+|.|++.
T Consensus 184 ~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 184 GQEATLLIEYDVS 196 (200)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEECCc
Confidence 8999999999764
No 164
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=2.8e-11 Score=90.54 Aligned_cols=87 Identities=24% Similarity=0.309 Sum_probs=70.8
Q ss_pred CceEEEEEecCCCCceeEEEEEeecCC--CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC-
Q psy12310 37 QNTFTVVIKRPNRHHSWGLRIAGGCDL--DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS- 111 (201)
Q Consensus 37 ~~~~~V~L~r~~~~~~~Gf~i~gG~~~--~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~- 111 (201)
.+...+.+.+.+....|||.+...... ..+++|..|.++||| .+| |++||+|++|||.++.+ +.++..+++..
T Consensus 18 ~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~ 95 (124)
T 1wh1_A 18 LELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEE 95 (124)
T ss_dssp CEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSS
T ss_pred ceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCC
Confidence 345566777765556799999876531 358999999999999 899 99999999999999985 67778888765
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..+.|+|.|++..
T Consensus 96 g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 96 NKNFSLLIARPELQ 109 (124)
T ss_dssp CCSCCEEEEECSSC
T ss_pred CCEEEEEEEECCEE
Confidence 78999999998865
No 165
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.23 E-value=6.3e-11 Score=92.53 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=67.3
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v 115 (201)
+.+.|.|.|. ....|||.+.... .+++|..|.++||| .+||++||+|++|||.++.++++..+..+++.. +..+
T Consensus 4 ~~r~v~l~k~-~~~~lG~~~~~~~---~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v 79 (166)
T 1w9e_A 4 DPREVILCKD-QDGKIGLRLKSID---NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKI 79 (166)
T ss_dssp CCEEEEEECC-TTSCCSEEEEEET---TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEE
T ss_pred CCEEEEEEeC-CCCcEeEEEEeCC---CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEE
Confidence 3567889886 4578999998753 57999999999999 899999999999999999999986666667654 6799
Q ss_pred EEEEEeC
Q psy12310 116 SLGIQRN 122 (201)
Q Consensus 116 ~L~v~R~ 122 (201)
.|+|+|+
T Consensus 80 ~l~vr~~ 86 (166)
T 1w9e_A 80 TMTIRDR 86 (166)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999544
No 166
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.22 E-value=1.8e-11 Score=108.98 Aligned_cols=136 Identities=17% Similarity=0.172 Sum_probs=85.5
Q ss_pred ceeEEEEEeecCCCC--CcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCCCc
Q psy12310 51 HSWGLRIAGGCDLDS--PIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPGEK 127 (201)
Q Consensus 51 ~~~Gf~i~gG~~~~~--pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~~~ 127 (201)
.++||.+....+... .++|..|.++||| +|||++||+|++|||.++.++. ...+++..+..|.|++.|.+....
T Consensus 74 ~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~~~~ 150 (403)
T 3k50_A 74 YGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVVGED 150 (403)
T ss_dssp CSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC---
T ss_pred cceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCcccc
Confidence 557777765443122 3789999999999 9999999999999999999885 345666678899999999875421
Q ss_pred c---ccccccCCCCCCCCccccccccccccccccc-cccccccCCcccccc--cccCCCcc-------cchHHHHHHHHH
Q psy12310 128 K---AASGSRSVTPLPIVDYCQKESKASSASMSVV-NSFHDFLDHQHVHRA--QAVASPFE-------LSSEHDLNYVIK 194 (201)
Q Consensus 128 ~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~f~~~~~~~~ig~~--~qf~~p~~-------~~s~~~i~~~~~ 194 (201)
. ....++....+.. +.....++.. ...- ..++.+|||+ ++|+...+ ....+++++|++
T Consensus 151 ~~~~~~~i~~~~~~l~~--------~r~~~~~pv~~~~v~-~~~~~~iGYI~i~~F~~~t~~~~~~~~~~l~~al~~l~~ 221 (403)
T 3k50_A 151 GEVTGGVVPIGETTMPA--------SRSLVDKPVHRFEII-PWNGKKVGYLMYNEFKAGPTTDSQAYNDDLRRAFRDFQT 221 (403)
T ss_dssp --CEEEEEEEEEEEECC--------CBCCCCCSEEEEEEE-EETTEEEEEEEECCBCCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccceEEEe--------eeeeeeccceeeeee-eeCCCcEEEEEEccccCcccccchhhHHHHHHHHHHHHH
Confidence 0 0001111110000 0000001111 0000 1245789997 99988653 678899999998
Q ss_pred hcCC
Q psy12310 195 EQLG 198 (201)
Q Consensus 195 ~~~~ 198 (201)
+|+.
T Consensus 222 ~~~~ 225 (403)
T 3k50_A 222 GGVN 225 (403)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8763
No 167
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.21 E-value=7.6e-11 Score=85.70 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=64.0
Q ss_pred EEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CCCeE
Q psy12310 40 FTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS---SDTSI 115 (201)
Q Consensus 40 ~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~---~g~~v 115 (201)
..+.|.+. ..+|||.+... ..+.+|..|.+|||| +|||++||+|++|||.++...++.+....++. ++..|
T Consensus 19 ~~l~l~~~--~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v 93 (101)
T 3qik_A 19 KRLLILPQ--EEDYGFDIEEK---NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPL 93 (101)
T ss_dssp EEEEECCC--SSSSSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEeC--CCcccEEEEcc---CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeE
Confidence 35566553 47799999864 346899999999999 99999999999999999987888988888876 58899
Q ss_pred EEEEEe
Q psy12310 116 SLGIQR 121 (201)
Q Consensus 116 ~L~v~R 121 (201)
.|.|..
T Consensus 94 ~LLV~~ 99 (101)
T 3qik_A 94 RLLVAT 99 (101)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 988863
No 168
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.15 E-value=1.6e-10 Score=92.46 Aligned_cols=85 Identities=22% Similarity=0.386 Sum_probs=71.4
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCC--CCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDL--DSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDT 113 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~--~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~ 113 (201)
..+++.+.+. ....|||.+....+. ..+++|..|.++||| .+| |++||+|++|||.++.++++.++..+++..+.
T Consensus 107 ~~~~v~l~~~-~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 185 (196)
T 1p1d_A 107 GTFHVKLPKK-HSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCED 185 (196)
T ss_dssp SCEEEEECCC-SSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTT
T ss_pred CcEEEEecCC-CCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4566777653 345699999876432 358999999999999 899 99999999999999999989999999987789
Q ss_pred eEEEEEEeCC
Q psy12310 114 SISLGIQRNP 123 (201)
Q Consensus 114 ~v~L~v~R~~ 123 (201)
.+.|+|.|++
T Consensus 186 ~v~l~v~R~~ 195 (196)
T 1p1d_A 186 LVKLKIRKDE 195 (196)
T ss_dssp CEEEEEECCC
T ss_pred EEEEEEEeCC
Confidence 9999999975
No 169
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.10 E-value=3.2e-10 Score=107.39 Aligned_cols=84 Identities=27% Similarity=0.466 Sum_probs=74.6
Q ss_pred ceEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSI 115 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v 115 (201)
..+.|.|.+. ..+|||.+.++.+ ..+++|..|.+|||| .+| |++||+|++|||.++.++++.+++.+++..+..|
T Consensus 307 ~~~~v~l~~~--~~~lG~~i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v 383 (721)
T 2xkx_A 307 EPRRIVIHRG--STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 383 (721)
T ss_pred ceEEEEEEEC--CCCccEEEeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 4567888875 3679999998866 568999999999999 888 9999999999999999999999999999888899
Q ss_pred EEEEEeCCC
Q psy12310 116 SLGIQRNPP 124 (201)
Q Consensus 116 ~L~v~R~~~ 124 (201)
.|+|.|...
T Consensus 384 ~L~v~r~~~ 392 (721)
T 2xkx_A 384 TIIAQYKPE 392 (721)
T ss_pred EEEEEeCch
Confidence 999998764
No 170
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.06 E-value=1.6e-10 Score=102.26 Aligned_cols=87 Identities=18% Similarity=0.278 Sum_probs=71.5
Q ss_pred ceEEEEEecCCCCceeEEEEEeecC--CCCCcEEEEECCCCcc-ccC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC--
Q psy12310 38 NTFTVVIKRPNRHHSWGLRIAGGCD--LDSPIVITKVYPGTPA-AAE-LKRGDIIRKIGDYDSRDLRHKDATNFFQSS-- 111 (201)
Q Consensus 38 ~~~~V~L~r~~~~~~~Gf~i~gG~~--~~~pi~V~~V~~gspA-~ag-L~~GD~Il~Ing~~v~~~~~~~av~~ik~~-- 111 (201)
....|.+.|. .+.+|||.|.++.. ...+++|..|.+|||| .+| |++||+|++|||.++.+++|.+++.+++..
T Consensus 204 ~~~~V~i~k~-~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 204 NCKELQLEKH-KGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp CCEEEEECCC-SSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred cceEEEEECC-CCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 4557888886 35789999988542 1235899999999999 888 999999999999999999999999899875
Q ss_pred CCeEEEEEEeCCCC
Q psy12310 112 DTSISLGIQRNPPG 125 (201)
Q Consensus 112 g~~v~L~v~R~~~~ 125 (201)
+..+.|+|.|.+..
T Consensus 283 ~~~v~l~v~r~~~~ 296 (388)
T 3suz_A 283 QTQVKLNIVSCPPV 296 (388)
T ss_dssp CSCEEEEEEECCSC
T ss_pred CCcccccccccccc
Confidence 45699999997654
No 171
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.78 E-value=1.9e-08 Score=76.19 Aligned_cols=60 Identities=20% Similarity=0.291 Sum_probs=49.5
Q ss_pred CCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++|||.+||++||+|++|||.++.++... ...+.. .|..+.|+|.|++..
T Consensus 56 ~~g~~V~~V~~~spA~aGL~~GD~I~~inG~~v~~~~~l--~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPANGHLEKYDVITKVDDKEIASSTDL--QSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGGTTSCSSCEEEEETTEECCCHHHH--HHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEEcCCHHHH--HHHHHhCCCCCEEEEEEEECCEE
Confidence 367999999999998899999999999999999886443 334432 588999999998754
No 172
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.77 E-value=1.5e-08 Score=72.75 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=48.9
Q ss_pred CCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++|||.+||++||+|++|||.++.++. +....+.. .+..+.|++.|++..
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQ--EFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHH--HHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHH--HHHHHHHhCCCCCEEEEEEEECCEE
Confidence 3579999999999994499999999999999998764 34445543 478999999998754
No 173
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.77 E-value=9.2e-09 Score=83.33 Aligned_cols=74 Identities=12% Similarity=0.006 Sum_probs=55.5
Q ss_pred eEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCC-CEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCCC
Q psy12310 53 WGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRG-DIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPGE 126 (201)
Q Consensus 53 ~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~G-D~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~~ 126 (201)
+|++...+.....+++|..|.++||| ++||++| |+|++|||+++.++.+.....+....+..+.|+|.|.+...
T Consensus 4 ~~~~~~~~~~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 79 (209)
T 3rle_A 4 SSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLE 79 (209)
T ss_dssp ----CCCTTSSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCC
T ss_pred hhhhhhccCCCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCce
Confidence 44444444444567999999999999 9999999 99999999999988765443233455889999999986543
No 174
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.77 E-value=2.5e-09 Score=75.92 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=48.5
Q ss_pred CcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC--CCeEEEEEEeCCCC
Q psy12310 66 PIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS--DTSISLGIQRNPPG 125 (201)
Q Consensus 66 pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~--g~~v~L~v~R~~~~ 125 (201)
+++|..|.++||| . ||++||+|++|||.++.++ .+...++... |..+.|+|.|++..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 5789999999999 7 9999999999999999875 4566667654 88999999998754
No 175
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.76 E-value=9.6e-09 Score=71.90 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=45.7
Q ss_pred CcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCC
Q psy12310 66 PIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPP 124 (201)
Q Consensus 66 pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~ 124 (201)
++.|..+.++||| ++||++||+|++|||.++.++... ..++.. .+..+.|+|.|++.
T Consensus 20 G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~--~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVM--NTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHH--HHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHH--HHHHHhcCCCCEEEEEEEECCE
Confidence 4667778888888 899999999999999999876443 344443 47899999999874
No 176
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.75 E-value=1.7e-08 Score=71.97 Aligned_cols=56 Identities=13% Similarity=0.187 Sum_probs=46.0
Q ss_pred cEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh-CC-CCeEEEEEEeCCC
Q psy12310 67 IVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ-SS-DTSISLGIQRNPP 124 (201)
Q Consensus 67 i~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik-~~-g~~v~L~v~R~~~ 124 (201)
.+|..|.++||| ++||++||+|++|||..+.++. +....+. .. +..+.|+|.|++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~--d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWD--AVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHH--HHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHH--HHHHHHHHhcCCCcEEEEEEECCC
Confidence 478899999999 8999999999999999998764 3444443 33 4789999999885
No 177
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.75 E-value=2.3e-08 Score=72.97 Aligned_cols=59 Identities=27% Similarity=0.472 Sum_probs=49.9
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++||| .+||++||+|++|||.++.++ .+....++. +..+.|+|.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGRET 93 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHH-CSSEEEEEEETTEE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 467999999999999 899999999999999999864 555556655 68899999998754
No 178
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.74 E-value=1.3e-08 Score=71.35 Aligned_cols=59 Identities=22% Similarity=0.248 Sum_probs=47.5
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh-CCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ-SSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik-~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| .+||++||+|++|||.++.++ .+....+. ..+..+.|++.|++..
T Consensus 4 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 4 IEPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp --CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred cCeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECCeE
Confidence 45789999999999 899999999999999999875 44444554 3478999999998743
No 179
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.73 E-value=1.2e-08 Score=72.68 Aligned_cols=59 Identities=17% Similarity=0.320 Sum_probs=48.8
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++||| . ||++||+|++|||.++.++ .+...++.. .+..+.|+|.|++..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 357899999999999 7 9999999999999999875 344455543 488999999998754
No 180
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.68 E-value=2.2e-09 Score=94.92 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=0.0
Q ss_pred EEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Q psy12310 42 VVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQ 120 (201)
Q Consensus 42 V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~ 120 (201)
+++.+......|||.+.+| +|..|.+|||| .+||++||+|++|||.++.+++|.+++.+++..+..+.|+|.
T Consensus 299 v~l~~~~~~~~lG~~i~~g-------~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~ 371 (388)
T 3suz_A 299 VLIKRPDLKYQLGFSVQNG-------IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTM 371 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEeecCCCCccceEEecC-------EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEE
Confidence 4443322345688887654 88999999999 899999999999999999999999999999988899999886
Q ss_pred eC
Q psy12310 121 RN 122 (201)
Q Consensus 121 R~ 122 (201)
+.
T Consensus 372 p~ 373 (388)
T 3suz_A 372 PA 373 (388)
T ss_dssp --
T ss_pred ec
Confidence 54
No 181
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.67 E-value=6.3e-08 Score=70.05 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=45.4
Q ss_pred CcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCC
Q psy12310 66 PIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPP 124 (201)
Q Consensus 66 pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~ 124 (201)
++.|..+.|+||| ++||++||+|++|||.++.++..... ++. ..+..+.|+|.|++.
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~--~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNT--LFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHH--HHHHHTTCSEEEEEEEETTE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHH--HHHhcCCCCeEEEEEEECCE
Confidence 3556677778888 89999999999999999998865542 333 457899999999874
No 182
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.64 E-value=1.6e-07 Score=73.00 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=61.1
Q ss_pred eEEEEEecCCCCceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Q psy12310 39 TFTVVIKRPNRHHSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISL 117 (201)
Q Consensus 39 ~~~V~L~r~~~~~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L 117 (201)
.++++|.+. ....|||.+.. + +|..|.++||| .+||++||+|++|||.++.++.+..+...+++.+..+.+
T Consensus 89 ~~~v~l~~~-~~~~lG~~~~~------g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l 160 (166)
T 1w9e_A 89 ERTITMHKD-STGHVGFIFKN------G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI 160 (166)
T ss_dssp CEEEEEECC-TTSCCSEEEET------T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred cEEEEEecC-CCCcEeEEEeC------C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEE
Confidence 456666643 34668998872 2 89999999999 899999999999999999999998888778888888887
Q ss_pred EEE
Q psy12310 118 GIQ 120 (201)
Q Consensus 118 ~v~ 120 (201)
.+.
T Consensus 161 ~v~ 163 (166)
T 1w9e_A 161 TIM 163 (166)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 183
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.62 E-value=7.4e-08 Score=70.20 Aligned_cols=59 Identities=22% Similarity=0.384 Sum_probs=48.9
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++||| .+||++||+|++|||.++.++ .+....++ .+..+.|+|.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~-~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVL-TESPLLLEVRRGNDD 93 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHH-HCSSEEEEEEETTEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHh-CCCeEEEEEEECCEE
Confidence 357999999999999 899999999999999999875 44444553 478899999998743
No 184
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.60 E-value=8.6e-08 Score=82.25 Aligned_cols=60 Identities=17% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEe-CCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQR-NPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R-~~~~ 125 (201)
..+++|..|.++||| ++||++||+|++|||.++.++.. ....+. ..|..+.|+|.| +++.
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA--LVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHH--HHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCCCE
Confidence 357899999999999 89999999999999999987643 334443 358999999999 7754
No 185
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.59 E-value=1.3e-07 Score=81.12 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=50.5
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++||| ++||++||+|++|||+++.++. +....++. .|..+.|+|.|+++.
T Consensus 243 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISAL--ETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHH--HHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEE
Confidence 357899999999999 9999999999999999998753 44455553 589999999998764
No 186
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.58 E-value=4.3e-08 Score=85.33 Aligned_cols=59 Identities=24% Similarity=0.392 Sum_probs=50.1
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQS--SDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~--~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||+++.++.. ....+.. .|..+.|+|.|+++.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE--LRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHH--HHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCEE
Confidence 57899999999999 99999999999999999987644 3444543 589999999998865
No 187
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.50 E-value=1.7e-07 Score=70.28 Aligned_cols=57 Identities=23% Similarity=0.359 Sum_probs=47.0
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPP 124 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~ 124 (201)
..+++|..|.++||| .+ |++||+|++|||.++.++. +....+. ..+..+.|+| |++.
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~--dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLT--TYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHH--HHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEE-ECCE
Confidence 357999999999999 88 9999999999999998764 3444554 3488999999 8774
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.49 E-value=2.1e-07 Score=83.25 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=51.3
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||+++.++.+..........|..+.|+|.|+++.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKP 324 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 57899999999999 99999999999999999998766554433334589999999998865
No 189
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.43 E-value=2.9e-07 Score=82.77 Aligned_cols=61 Identities=25% Similarity=0.383 Sum_probs=50.9
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||+++.++.+..........|..+.|+|.|+++.
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 343 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKP 343 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 67899999999999 89999999999999999998755544322234589999999998765
No 190
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.43 E-value=8.6e-07 Score=79.28 Aligned_cols=59 Identities=24% Similarity=0.366 Sum_probs=51.7
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||+++.++ .+...+++..+..+.|+|.|++..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSI--AEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCeEEEEEEECCEE
Confidence 47999999999999 999999999999999999864 566777877767999999998754
No 191
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.42 E-value=3.8e-07 Score=84.80 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=55.0
Q ss_pred ceeEEEEEeecCCCCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCCC
Q psy12310 51 HSWGLRIAGGCDLDSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPPG 125 (201)
Q Consensus 51 ~~~Gf~i~gG~~~~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~~ 125 (201)
..+|+.+.... .+++|..|.++||| ++||++||+|++|||.++......+ +++ ..|..|.|+|.|++..
T Consensus 485 ~~lG~~~~~~~---~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~l~~---~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 485 VNFGAKYKASP---QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQSVKR---ILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCCSEEEEEET---TEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTTHHH---HHTTCCTTCEEEEEEEETTEE
T ss_pred cccceEEeccC---CeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHHHHH---HHHhcCCCCEEEEEEEECCEE
Confidence 46888876542 36999999999999 9999999999999999995333333 343 3589999999998865
No 192
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.34 E-value=3.1e-07 Score=89.04 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=56.1
Q ss_pred CceeEEEEEeecCCCCCcEEEEECCC--------Ccc-ccC--CCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEE
Q psy12310 50 HHSWGLRIAGGCDLDSPIVITKVYPG--------TPA-AAE--LKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSISL 117 (201)
Q Consensus 50 ~~~~Gf~i~gG~~~~~pi~V~~V~~g--------spA-~ag--L~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v~L 117 (201)
..++|+.+.-- ...++|..|.+| ||| ++| |+ ||+|++|||+++.++. ++..++++. |..|.|
T Consensus 736 ~~g~G~~~~~~---~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 736 SGRIACDFKLD---GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARI 809 (1045)
T ss_dssp CCBCSEEEEEE---TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEE
T ss_pred cceecEEEEEe---CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEE
Confidence 34677776542 246899999998 999 899 99 9999999999999876 456677665 899999
Q ss_pred EEEeCCC
Q psy12310 118 GIQRNPP 124 (201)
Q Consensus 118 ~v~R~~~ 124 (201)
+|.|.+.
T Consensus 810 ~v~r~~~ 816 (1045)
T 1k32_A 810 RLSGKGG 816 (1045)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 9999763
No 193
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.32 E-value=2.9e-06 Score=68.52 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=54.2
Q ss_pred ceeEEEEEeecCC---CCCcEEEEECCCCcc-ccCCCC-CCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeCCC
Q psy12310 51 HSWGLRIAGGCDL---DSPIVITKVYPGTPA-AAELKR-GDIIRKIGDYDSRDLRHKDATNFFQS-SDTSISLGIQRNPP 124 (201)
Q Consensus 51 ~~~Gf~i~gG~~~---~~pi~V~~V~~gspA-~agL~~-GD~Il~Ing~~v~~~~~~~av~~ik~-~g~~v~L~v~R~~~ 124 (201)
..+|+.+..-... ..+++|..|.++||| .+||++ ||+|++|||. +.++... ...++. .+..+.|+|.|.+.
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l--~~~l~~~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDL--FSLIETHEAKPLKLYVYNTDT 171 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCH--HHHHHHTTTSCEEEEEEETTT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHH--HHHHHhCCCCeEEEEEEECCc
Confidence 3578887642211 257899999999999 999999 9999999998 8776443 334443 58899999999764
Q ss_pred C
Q psy12310 125 G 125 (201)
Q Consensus 125 ~ 125 (201)
.
T Consensus 172 ~ 172 (209)
T 3rle_A 172 D 172 (209)
T ss_dssp T
T ss_pred e
Confidence 3
No 194
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.30 E-value=1.5e-06 Score=74.65 Aligned_cols=58 Identities=28% Similarity=0.474 Sum_probs=49.5
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||.++.++ .+....++. +..+.|+|.|++..
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~--~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHTT-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 57999999999999 999999999999999999875 444555654 68999999998754
No 195
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.30 E-value=4.9e-07 Score=78.47 Aligned_cols=59 Identities=19% Similarity=0.314 Sum_probs=50.0
Q ss_pred CCcEEEEECCCCcc-ccCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKR-----------GDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~-----------GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++ ||+|++|||+++.++... ...+. ..|..+.|+|.|+++.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl--~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDL--YRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHH--HHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHH--HHHHHhCCCcCEEEEEEEECCEE
Confidence 47899999999999 999999 999999999999987543 44453 3489999999998865
No 196
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.26 E-value=1.1e-06 Score=79.13 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=51.1
Q ss_pred CcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 66 PIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 66 pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
+++|..|.++||| ++||++||+|++|||+++.++ .+...+++..+..+.|+|.|++..
T Consensus 387 Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~ 445 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAGIRPGDIIISANKKPVTDV--KSLQTIAQEKKKELLVQVLRGPGS 445 (451)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHTTSSCSCEEEEEEETTEE
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhcCCCeEEEEEEECCEE
Confidence 6899999999999 999999999999999999865 566677877788999999998753
No 197
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.16 E-value=2.6e-07 Score=79.64 Aligned_cols=59 Identities=24% Similarity=0.363 Sum_probs=0.0
Q ss_pred CCCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 64 DSPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 64 ~~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
..+++|..|.++||| ++||++||+|++|||+++.++... ...++. +..+.|+|.|+++.
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDV--SDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHH--HHHHhC-CCeEEEEEEECCEE
Confidence 357899999999999 899999999999999999876443 344543 78899999998765
No 198
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.08 E-value=9.4e-07 Score=79.40 Aligned_cols=59 Identities=19% Similarity=0.338 Sum_probs=49.8
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQ--SSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik--~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||..+.++.+ ....+. ..|..+.|+|.|++..
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~ 347 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAA--LRAQVGTMPVGSKLTLGLLRDGKQ 347 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHH--HHHHTTSSBTTCCCEEEEESSSCE
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHH--HHHHHHhcCCCCEEEEEEEECCEE
Confidence 47899999999999 89999999999999999998754 344454 3588999999998754
No 199
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.96 E-value=1.3e-05 Score=73.65 Aligned_cols=63 Identities=19% Similarity=0.199 Sum_probs=48.3
Q ss_pred CCCcEEEEECCCCccccCCCCCCEEEEECCEECCCCCH----------HHHHHHHhCCCCeEEEEEEeCCCCC
Q psy12310 64 DSPIVITKVYPGTPAAAELKRGDIIRKIGDYDSRDLRH----------KDATNFFQSSDTSISLGIQRNPPGE 126 (201)
Q Consensus 64 ~~pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~~~~----------~~av~~ik~~g~~v~L~v~R~~~~~ 126 (201)
..+++|..|.++|||.++|++||+|++|||..+.+... ....-.-+..|..+.|+|.|+++..
T Consensus 276 ~~Gv~V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SBCEEEEEECTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred cCceeeecccCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 35899999999999943499999999999999965321 1112123456999999999998763
No 200
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.92 E-value=1.4e-06 Score=78.35 Aligned_cols=59 Identities=27% Similarity=0.474 Sum_probs=0.0
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCC
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSSDTSISLGIQRNPPG 125 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~g~~v~L~v~R~~~~ 125 (201)
.+++|..|.++||| ++||++||+|++|||.++.++ .+...+++.....+.|+|.|++..
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~--~~l~~~l~~~~~~v~l~v~R~g~~ 442 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNI--AELRKVLDSKPSVLALNIQRGDST 442 (448)
T ss_dssp --------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHcCCCeEEEEEEECCEE
Confidence 47899999999999 999999999999999999865 445566766555889999998754
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.48 E-value=0.0051 Score=56.43 Aligned_cols=53 Identities=11% Similarity=0.226 Sum_probs=43.7
Q ss_pred CCcEEEEECCCCcc-ccCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEE
Q psy12310 65 SPIVITKVYPGTPA-AAELKRGDIIRKIGDYDSRDLRHKDATNFFQSS-DTSISLGI 119 (201)
Q Consensus 65 ~pi~V~~V~~gspA-~agL~~GD~Il~Ing~~v~~~~~~~av~~ik~~-g~~v~L~v 119 (201)
.+++|..|.++++| .+++++||+|++|||+++.++.+. .++++.+ +..+.+..
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l--~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHL--AHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHH--HHHHHTCCSSEEEEEE
T ss_pred eEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHH--HHHHHHcCCCeEEEEE
Confidence 47899999999999 899999999999999999987654 5567777 45555554
No 202
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=33.49 E-value=25 Score=24.60 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=15.3
Q ss_pred chHHHHHHHHHhcCCCC
Q psy12310 184 SSEHDLNYVIKEQLGPK 200 (201)
Q Consensus 184 ~s~~~i~~~~~~~~~~~ 200 (201)
.-+++++||...|+.||
T Consensus 21 ~ieekinELk~dG~ePD 37 (103)
T 2pk8_A 21 EIEEKMNELKMDGFNPD 37 (103)
T ss_dssp HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 35899999999999997
No 203
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=30.91 E-value=64 Score=29.65 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=21.9
Q ss_pred CcEEEEECCCCccccCCCCCCEEEEECCEECCC
Q psy12310 66 PIVITKVYPGTPAAAELKRGDIIRKIGDYDSRD 98 (201)
Q Consensus 66 pi~V~~V~~gspA~agL~~GD~Il~Ing~~v~~ 98 (201)
.++|..+... .+++..||.|++|||.++..
T Consensus 97 ~i~V~dv~~~---~s~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTF---SSEIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSS---CCSSCTTCEEEEETTEEHHH
T ss_pred cEEEEecccc---ccCCCCCCEEEEECCccHHH
Confidence 3666555221 34799999999999999854
Done!