Query psy12312
Match_columns 1045
No_of_seqs 276 out of 507
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 15:52:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fba_A Glucoamylase Glu1; (alp 100.0 2.2E-38 7.5E-43 370.0 18.7 320 10-382 32-489 (492)
2 1gai_A Glucoamylase-471; hydro 100.0 3.9E-37 1.3E-41 357.3 24.0 300 19-384 34-434 (472)
3 2vn4_A Glucoamylase; hydrolase 100.0 6.9E-35 2.4E-39 347.6 24.4 305 19-385 33-440 (599)
4 1lf6_A Glucoamylase; (alpha/al 100.0 1.2E-34 4.2E-39 350.8 21.3 285 28-380 342-669 (684)
5 1ulv_A Glucodextranase; GH fam 100.0 9.2E-31 3.1E-35 327.6 23.4 298 28-381 331-670 (1020)
6 2p0v_A Hypothetical protein BT 99.8 1.6E-18 5.5E-23 199.7 18.0 240 97-378 177-468 (489)
7 3p2c_A Putative glycosyl hydro 99.4 2.3E-12 7.8E-17 147.9 17.4 240 97-379 160-451 (463)
8 3qt9_A Putative uncharacterize 99.3 3.7E-11 1.3E-15 136.8 15.0 242 96-378 131-422 (427)
9 3qry_B Putative uncharacterize 99.2 6E-11 2.1E-15 135.1 15.0 243 96-380 130-424 (426)
10 3c68_A Uncharacterized protein 98.2 1.7E-05 5.8E-10 97.7 18.5 111 236-376 642-755 (761)
11 2z07_A Putative uncharacterize 98.1 0.00014 4.7E-09 82.8 20.5 163 167-373 239-417 (420)
12 1v7w_A Chitobiose phosphorylas 97.6 0.00017 5.7E-09 89.0 10.5 210 100-323 426-673 (807)
13 2okx_A Rhamnosidase B; alpha b 97.2 0.004 1.4E-07 78.6 17.6 197 100-339 628-845 (956)
14 2jg0_A Periplasmic trehalase; 96.8 0.02 6.9E-07 67.9 16.6 208 136-380 277-504 (535)
15 3rrs_A Cellobiose phosphorylas 96.1 0.15 5E-06 63.6 19.6 271 28-324 366-696 (822)
16 3qde_A Cellobiose phosphorylas 96.1 0.093 3.2E-06 65.2 17.7 269 28-324 359-683 (811)
17 3cih_A Putative alpha-rhamnosi 94.7 0.15 5.2E-06 62.5 12.6 196 99-339 383-601 (739)
18 2zzr_A Unsaturated glucuronyl 42.4 2.2E+02 0.0076 32.4 13.3 147 8-178 144-319 (397)
19 1h54_A Maltose phosphorylase; 41.8 5.5E+02 0.019 31.5 17.7 164 32-211 362-543 (754)
20 3dss_B Geranylgeranyl transfer 27.6 4E+02 0.014 29.3 12.1 71 294-390 239-312 (331)
21 1nc5_A Hypothetical protein YT 26.4 98 0.0034 34.4 6.9 91 6-114 245-366 (373)
No 1
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=100.00 E-value=2.2e-38 Score=370.00 Aligned_cols=320 Identities=12% Similarity=0.075 Sum_probs=233.8
Q ss_pred hhhccccC--------CCcccccCCC----------chhHHHHHHHHHh--c--------HHHHHHHHHHHH--HHHhcc
Q psy12312 10 LVSVLTDS--------LINLVPAQTH----------LRTNVDTRLGFFI--G--------RYSCVKLMRGLL--MAMMQQ 59 (1045)
Q Consensus 10 ~il~~Q~p--------~tGl~pAs~~----------VRDa~yt~~Al~~--l--------~~~A~k~mr~LL--~~~m~q 59 (1045)
-||..+.| .+|.+.||++ +||++|++.||.. + .+++.+|++|.. ......
T Consensus 32 ~~l~ni~~~~g~~~~~~~GaiIASpttsnpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~~ 111 (492)
T 2fba_A 32 YLLQNIAYPEGQFNNGVPGTVIASPSTSNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNP 111 (492)
T ss_dssp HHHHTBBCTTSSBTTSCTTCBCSCSCBSSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCBT
T ss_pred HHHhcCCCcccCCCCCCCCeEEEeCCCCCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccCC
Confidence 35566555 5677777654 9999999999984 4 888999998842 211110
Q ss_pred hhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHHHHHHHHHHHcCCceeeC---------------cc
Q psy12312 60 KHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLYLLILAQMTASGLQIVFC---------------LD 124 (1045)
Q Consensus 60 ~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~LlaL~qm~~sGl~ii~t---------------~d 124 (1045)
...++.. ....-.++||+.+|... ..+|++.|+|.+|+.+++++++.+.+....+. .+
T Consensus 112 ~G~~~~~----~~~glgep~y~vdG~~~---~~~w~~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (492)
T 2fba_A 112 SGSFDDE----NHKGLGEPKFNTDGSAY---TGAWGRPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTED 184 (492)
T ss_dssp TBCTTSG----GGGGGGCCEECTTSCBC---CSCCSCCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHH
T ss_pred CCCcCcc----cccccCceeeccCCCcC---CcccCCccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHH
Confidence 1001000 00011236999986532 45899999999999999999876543222110 24
Q ss_pred hH-HHHHHHHHHHHHhCCCCCCCCcccCCCCCCCCCcchhhHHHHHHHHHHH-HhhhhhcCCCCCCcchhhchHHHHHHH
Q psy12312 125 EV-AFIQNLVFYIESAYCIPDYGIWERGDKSNHGLPELNASSIGMAKAALEA-MNELDLFGARGGPSSVIHVLADEAQKC 202 (1045)
Q Consensus 125 ev-~fIqnLV~yie~~wr~PD~GIWErr~k~N~g~~e~~asSigMa~AALea-i~~~~lfG~~g~~~svi~v~~D~i~r~ 202 (1045)
.| ..|++.++|+.+.|+.||+||||++.+ +|+||++|||+||++ ++.++.+|.++.. ..|...+|.|++
T Consensus 185 ~~~~~i~~~l~~v~~~w~~pd~dlWEer~g-------~~~~T~~~~~~AL~~aa~lA~~~g~~~~a-~~w~~~ad~i~~- 255 (492)
T 2fba_A 185 IYKNIIKPDLEYVIGYWDSTGFDLWEENQG-------RHFFTSLVQQKALAYAVDIAKSFDDGDFA-NTLSSTASTLES- 255 (492)
T ss_dssp HHHHTHHHHHHHHHHHTTSCEECTTSCCEE-------CCHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcCccCC-------CChHHHHHHHHHHHHHHHHHHHcCCchHH-HHHHHHHHHHHH-
Confidence 55 799999999999999999999999977 799999999999986 4445788854322 234445555544
Q ss_pred HHHHHc---cCC-------CCC------CCcccccccchhhhcCC---------CCCCCHHHHHHHHHHHHHHhccC---
Q psy12312 203 QAVLQS---MLP-------RES------SSKELDSGLLSVISFPA---------FAVDDPLLISETREAIVSKLRGK--- 254 (1045)
Q Consensus 203 ~~il~~---~Lp-------res------~SkevDASLL~ii~~p~---------fav~Dp~~~~~T~~~I~~kL~g~--- 254 (1045)
.|++. .+. |.+ +++.+|||+|.++.++| |+++|| ++.+|+++|+++|..+
T Consensus 256 -~I~~~~~~~w~~~~~~f~~~~~~~~~~~~~~lDas~Ll~~~~~f~~~~~~~~~~~p~Dp-r~l~Tl~ai~~~L~~~~pi 333 (492)
T 2fba_A 256 -YLSGSDGGFVNTDVNHIVENPDLLQQNSRQGLDSATYIGPLLTHDIGESSSTPFDVDNE-YVLQSYYLLLEDNKDRYSV 333 (492)
T ss_dssp -HHHSTTTCCEETTTTEECSSHHHHHTTSCCSCCTHHHHHHHHHSCTTSCCCCSCCTTCH-HHHHHHHHHHHHHHHHCGG
T ss_pred -HHHHhhhcCCCCCCCEEEEeccccccCCCCcccHHHHHHHHhccccccccCCccCCCCH-HHHHHHHHHHHHHhcccCc
Confidence 55543 333 233 78999999999996554 999999 9999999999999866
Q ss_pred ------C-ceeeccCCCCCCCCCCCCCCCCChhhhhccCC-CCcchhhhHHHHHHHH--------HHc------------
Q psy12312 255 ------Y-GCKRFLRDGYRTPKEDPNRLHYDPLELRMFEN-IESEWPLFFCYLILDF--------CFQ------------ 306 (1045)
Q Consensus 255 ------y-GvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg-~E~ewplf~~~l~i~~--------i~~------------ 306 (1045)
+ |+.||..|+|.. .++ .|++|++|++|++... ...
T Consensus 334 n~~~~~g~~v~RY~~D~y~g-----------------~~~~~g~pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f 396 (492)
T 2fba_A 334 NSAYSAGAAIGRYPEDVYNG-----------------DGSSEGNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDF 396 (492)
T ss_dssp GTTCSSCCCCCSCTTCCBCS-----------------SSBSSCCCBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHH
T ss_pred cccCcceeEEEeCCCCCCCC-----------------CCccCCCcHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHH
Confidence 4 899999998832 223 3789999999998721 234
Q ss_pred -------------CC----------------------HHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCC
Q psy12312 307 -------------GD----------------------EARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNP 351 (1045)
Q Consensus 307 -------------G~----------------------~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p 351 (1045)
|+ .++|+++++++..+ .|..|+|||+|.-
T Consensus 397 ~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~l~~~~~~----~~~~GllsEq~d~------------ 460 (492)
T 2fba_A 397 FNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDH----INDDGSLNEQLNR------------ 460 (492)
T ss_dssp HHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHHHHHHHHH----SCTTSCCCSEECT------------
T ss_pred HHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHHHHHHHHH----CCCCCCCccccCC------------
Confidence 35 68999999999998 6667799999742
Q ss_pred CcceecccCCCCccchhHHHHHHHHHhccCC
Q psy12312 352 GCVERIALGRCPLLWAQSLYILGRLLQHGFL 382 (1045)
Q Consensus 352 ~s~~r~p~gn~PllWsqslyi~~~ll~~~~l 382 (1045)
. ++.|.||+||+|||+.||.+....++.+
T Consensus 461 ~--tG~~~ga~PltwSha~li~aa~~~~~~~ 489 (492)
T 2fba_A 461 Y--TGYSTGAYSLTWSSGALLEAIRLRNKVK 489 (492)
T ss_dssp T--TCCEESSTTCHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCCCCccchHHHHHHHHHHHHHHhhcc
Confidence 1 4578899999999999999988776544
No 2
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=100.00 E-value=3.9e-37 Score=357.28 Aligned_cols=300 Identities=14% Similarity=0.132 Sum_probs=234.6
Q ss_pred CcccccCCC----------chhHHHHHHHHH---h--cHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccc------
Q psy12312 19 INLVPAQTH----------LRTNVDTRLGFF---I--GRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALH------ 77 (1045)
Q Consensus 19 tGl~pAs~~----------VRDa~yt~~Al~---~--l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh------ 77 (1045)
+|.+.||++ +||++|++.||. . +.+++.++++||.....-|. ...+.+.++
T Consensus 34 tGaiIASpttsnpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~--------~~~~~G~l~~~glgE 105 (472)
T 1gai_A 34 SGIVVASPSTDNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQG--------VSNPSGDLSSGGLGE 105 (472)
T ss_dssp TTCBCSCSCBSSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHH--------CCBTTBCTTTTGGGC
T ss_pred CceEEeeCCCCCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhc--------ccCCCCccccCCCCC
Confidence 577776543 999999999998 3 78899999999987654331 112334566
Q ss_pred cccccCCCccccCCcccchhhhhH-----HHHHHHHHHHHHHcCCceeeCcchHHHHHHHHHHHHHhCCCCCCCCcccCC
Q psy12312 78 AKYHSATGETVVGDTEWGHLQIDA-----ISLYLLILAQMTASGLQIVFCLDEVAFIQNLVFYIESAYCIPDYGIWERGD 152 (1045)
Q Consensus 78 ~kY~~~tg~pVvGn~aw~hlQlDa-----~gl~LlaL~qm~~sGl~ii~t~dev~fIqnLV~yie~~wr~PD~GIWErr~ 152 (1045)
+||+.++... ..+|++.|+|. +|+++++.+ +.+.|..-....+-|..|++.++||.+.|+.||+||||++.
T Consensus 106 ~~y~vdG~~~---~~~w~~~Q~D~~g~ra~~~~~~~~~-l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~pd~dlWEer~ 181 (472)
T 1gai_A 106 PKFNVDETAY---TGSWGRPQRDGPALRATAMIGFGQW-LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQTGYDLWEEVN 181 (472)
T ss_dssp CEECTTSCBC---CSCCSCCCTHHHHHHHHHHHHHHHH-HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSCEECTTSCCE
T ss_pred ceEccCCCcc---CCcCCCccccccchhHHHHHHHHHH-HHHcCCccccchhHHHHHHHHHHHHHHhcCCCCCCCCcccC
Confidence 9999986432 24799999999 667888887 67777431112246999999999999999999999999997
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHH-hhhhhcCCCCCCcchhhchHHHHHHHHHHHHccCC----CCC---CCcccccccc
Q psy12312 153 KSNHGLPELNASSIGMAKAALEAM-NELDLFGARGGPSSVIHVLADEAQKCQAVLQSMLP----RES---SSKELDSGLL 224 (1045)
Q Consensus 153 k~N~g~~e~~asSigMa~AALeai-~~~~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lp----res---~SkevDASLL 224 (1045)
+ +|+||++|||+||+++ +.++.+|.+ ...|...+|.|+. .+ +.+.. |.+ +++.+|||+|
T Consensus 182 g-------~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~--~i-~~~w~g~f~~~~~~~~~~~lDas~L 248 (472)
T 1gai_A 182 G-------SSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILC--YL-QSFWTGSYILANFDSSRSGKDTNTL 248 (472)
T ss_dssp E-------EEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHH--HH-GGGBCSSSBCSEESCCSCCCCTHHH
T ss_pred C-------CCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHH--HH-HhhcCCceEEeecCCCCCCcCHHHH
Confidence 6 8999999999999874 445888866 3355666677754 44 55444 444 6889999999
Q ss_pred hhhhcCCCCC-----------CCHHHHHHHHHHHHHHhc-----cC----C---ceeeccCCCCCCCCCCCCCCCCChhh
Q psy12312 225 SVISFPAFAV-----------DDPLLISETREAIVSKLR-----GK----Y---GCKRFLRDGYRTPKEDPNRLHYDPLE 281 (1045)
Q Consensus 225 ~ii~~p~fav-----------~Dp~~~~~T~~~I~~kL~-----g~----y---GvkRY~~Dgy~t~~ed~~r~~Y~~~e 281 (1045)
+++.++| ++ +|| ++.+|+++|+++|. .+ + |++||..|+|.
T Consensus 249 L~~~~~f-~p~~~~~~~~~~p~Dp-r~l~Tl~ai~~~L~~~y~i~~~~~~g~g~~v~RY~~D~y~--------------- 311 (472)
T 1gai_A 249 LGSIHTF-DPEAGCDDSTFQPCSP-RALANHKEVVDSFRSIYTLNDGLSDSEAVAVGRYPEDSYY--------------- 311 (472)
T ss_dssp HHHHTTC-CTTCCSCTTTTCTTSH-HHHHHHHHHHHTTTTTCGGGTTCCTTSCCCCCSCTTCCGG---------------
T ss_pred HhhhccC-CccccccccCCCCCCH-HHHHHHHHHHHHHHHhcCcCCCCcCcccceEEeCCCCCCC---------------
Confidence 9888776 55 999 99999999999997 22 3 88999999881
Q ss_pred hhccCCCCcchhhhHHHHHHHHH-----------------------------HcC----------CHHH-----HHHHHH
Q psy12312 282 LRMFENIESEWPLFFCYLILDFC-----------------------------FQG----------DEAR-----VKEYGE 317 (1045)
Q Consensus 282 ~~~feg~E~ewplf~~~l~i~~i-----------------------------~~G----------~~e~-----A~ey~e 317 (1045)
| |++|++|++|++..+. ..| +.++ |+++++
T Consensus 312 -----g-g~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e 385 (472)
T 1gai_A 312 -----N-GNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVS 385 (472)
T ss_dssp -----G-SCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHH
T ss_pred -----C-CCcHHHHHHHHHHHHHHHHHHhhccCceeecchhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHH
Confidence 2 8999999999987743 256 6667 999999
Q ss_pred HHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCccchhHHHHHHHHHhccCCCC
Q psy12312 318 ALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLLWAQSLYILGRLLQHGFLAT 384 (1045)
Q Consensus 318 ~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~PllWsqslyi~~~ll~~~~l~~ 384 (1045)
++... .|..|+|||+|.. . .+.|.||+||+|||+.||.+...+++.+.+
T Consensus 386 ~~~~~----~~~~GllsEq~d~------------~--tG~~~gn~PlawSha~lI~aa~~l~~~~~~ 434 (472)
T 1gai_A 386 IVETH----AASNGSLSEQFDK------------S--DGDELSARDLTWSYAALLTANNRRNSVVPP 434 (472)
T ss_dssp HHHHH----SCTTCCCCSEECT------------T--TCCEESSSSCHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHH----CCCCCCcccccCC------------C--CCCCCCccchHHHHHHHHHHHHHHhccCCC
Confidence 99998 6777799999742 1 457889999999999999999999888765
No 3
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=100.00 E-value=6.9e-35 Score=347.63 Aligned_cols=305 Identities=12% Similarity=0.103 Sum_probs=231.2
Q ss_pred CcccccCCC----------chhHHHHHHHHH----h--cHHHHHHHHHHHHHHHhcchhhHHhhh--ccCCCC--ccccc
Q psy12312 19 INLVPAQTH----------LRTNVDTRLGFF----I--GRYSCVKLMRGLLMAMMQQKHKVEQFK--ITQNPL--DALHA 78 (1045)
Q Consensus 19 tGl~pAs~~----------VRDa~yt~~Al~----~--l~~~A~k~mr~LL~~~m~q~~kve~fk--~~~~~~--~~lh~ 78 (1045)
+|.+.||++ +||++|++.||. . +.++|.++++||.+. .++|.+. +|..+. +--.+
T Consensus 33 tGaiIAsptts~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~-----~~lQ~~y~~~G~~~~~~~l~E~ 107 (599)
T 2vn4_A 33 AGAVIASPSTIDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQ-----VTLQGLSNPSGSLADGSGLGEP 107 (599)
T ss_dssp TTCBCSCSCCSSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHH-----HHHHHCCBTTBCSTTSGGGGCC
T ss_pred CceEEEECCCCCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcc-----cceeeeeCCCCCcccccCcCce
Confidence 577776543 999999999998 3 789999999999872 4566652 332211 12236
Q ss_pred ccccCCCccccCCcccchhhhhH-----HHHHHHHHHHHHHcCCceeeCcchHHHHHHHHHHHHHhCCCCCCCCcccCCC
Q psy12312 79 KYHSATGETVVGDTEWGHLQIDA-----ISLYLLILAQMTASGLQIVFCLDEVAFIQNLVFYIESAYCIPDYGIWERGDK 153 (1045)
Q Consensus 79 kY~~~tg~pVvGn~aw~hlQlDa-----~gl~LlaL~qm~~sGl~ii~t~dev~fIqnLV~yie~~wr~PD~GIWErr~k 153 (1045)
+|+.+| .+ .|.+|++.|+|. +|+++++++ +.+.|..-....+-|.+|+++++|+.+.|+.||+||||++.+
T Consensus 108 ~~~ldG-~~--~~~~w~~~Q~D~~glr~~~~~~~~~~-~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~d~dlWEer~g 183 (599)
T 2vn4_A 108 KFELTL-KP--FTGNWGRPQRDGPALRAIALIGYSKW-LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGFDLWEEVNG 183 (599)
T ss_dssp EECTTS-CB--CCSCCSCCCTHHHHHHHHHHHHHHHH-HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSCEECTTSCCEE
T ss_pred EEecCC-cc--ccCcCCCeeccccchhHHHHHHHHHH-HHHhCCcccccHHHHHHHHHHHHHHHHhCCCCCCCeeeecCC
Confidence 787764 33 277999999999 566777666 566663210012359999999999999999999999999976
Q ss_pred CCCCCCcchhhHHHHHHHHHHH-HhhhhhcCCCCCCcchhhchHHHHHHHHHHHHccC------CCCC-----CCccccc
Q psy12312 154 SNHGLPELNASSIGMAKAALEA-MNELDLFGARGGPSSVIHVLADEAQKCQAVLQSML------PRES-----SSKELDS 221 (1045)
Q Consensus 154 ~N~g~~e~~asSigMa~AALea-i~~~~lfG~~g~~~svi~v~~D~i~r~~~il~~~L------pres-----~SkevDA 221 (1045)
+|+||++|||+||++ ++.++.+|.+ ...|...+|+|.. .+ +..+ -|.+ +++.+||
T Consensus 184 -------~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w~~~ad~i~~--~i-~~~w~~~g~f~~~~~~~~~~~~~lDa 250 (599)
T 2vn4_A 184 -------SSFFTVANQHRALVEGATLAATLGQS---GSAYSSVAPQVLC--FL-QRFWVSSGGYVDSNINTNEGRTGKDV 250 (599)
T ss_dssp -------EEHHHHHHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHH--HH-GGGEETTTTEECSEESSCCCCCCCBT
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHH--HH-HhhcCCCCCEEEEecCccCCCCCcCH
Confidence 899999999999986 4545888866 3355666677754 44 4343 2444 7889999
Q ss_pred ccchhhhcCC----------CCCCCHHHHHHHHHHHHHHhc-----cC----C---ceeeccCCCCCCCCCCCCCCCCCh
Q psy12312 222 GLLSVISFPA----------FAVDDPLLISETREAIVSKLR-----GK----Y---GCKRFLRDGYRTPKEDPNRLHYDP 279 (1045)
Q Consensus 222 SLL~ii~~p~----------fav~Dp~~~~~T~~~I~~kL~-----g~----y---GvkRY~~Dgy~t~~ed~~r~~Y~~ 279 (1045)
|+|+++.++| |+++|| ++.+|+++|+++|. .+ + |++||..|+|.
T Consensus 251 s~LL~~~~~f~~~~~~~~~~~~p~dp-r~l~Tl~ai~~~L~~~y~i~~g~~~g~~~~v~RY~~D~y~------------- 316 (599)
T 2vn4_A 251 NSVLTSIHTFDPNLGCDAGTFQPCSD-KALSNLKVVVDSFRSIYGVNKGIPAGAAVAIGRYAEDVYY------------- 316 (599)
T ss_dssp HHHHHHHHSCCGGGTTCTTTTCTTSH-HHHHHHHHHHHHHHTTCGGGTTCCTTSCCCCCSBTTCCGG-------------
T ss_pred HHHhhhhccCCccccccccCCCCCCH-HHHHHHHHHHHHHHhhcCcCCCCcCCceeEEEeCCCCCCC-------------
Confidence 9998887765 445999 99999999999997 22 3 78999999881
Q ss_pred hhhhccCCCCcchhhhHHHHHHHHH-----------------------------HcCC----------HHH-----HHHH
Q psy12312 280 LELRMFENIESEWPLFFCYLILDFC-----------------------------FQGD----------EAR-----VKEY 315 (1045)
Q Consensus 280 ~e~~~feg~E~ewplf~~~l~i~~i-----------------------------~~G~----------~e~-----A~ey 315 (1045)
| |++|++|++|++..+. ..|+ .++ |+++
T Consensus 317 -------G-g~pw~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~ 388 (599)
T 2vn4_A 317 -------N-GNPWYLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGF 388 (599)
T ss_dssp -------G-CCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHH
T ss_pred -------C-CCcHHHHHHHHHHHHHHHHHhhhccCceeeccchhHHHhhhcccccccccccCchhHHHHHHHHHHHHHHH
Confidence 2 8999999999987632 1453 244 9999
Q ss_pred HHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCccchhHHHHHHHHHhccCCCCC
Q psy12312 316 GEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLLWAQSLYILGRLLQHGFLATG 385 (1045)
Q Consensus 316 ~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~PllWsqslyi~~~ll~~~~l~~~ 385 (1045)
+++++.. .|..|+|||+|.. . .+.|.||+||+|||+.||.+...+++.+.|.
T Consensus 389 ~~~~~~~----a~~~GllsEqvd~------------~--~G~~~gn~PlawSha~lI~a~~~~~~~v~~~ 440 (599)
T 2vn4_A 389 LSEAAKY----VPADGSLAEQFDR------------N--SGTPLSALHLTWSYASFLTATARRAGIVPPS 440 (599)
T ss_dssp HHHHHTT----SCTTCCCCSEECT------------T--TCCEESSSSCHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHh----cCCCCCcccccCC------------C--CCccCCcchHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999998 6777799999742 2 4588999999999999999999998887664
No 4
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=100.00 E-value=1.2e-34 Score=350.77 Aligned_cols=285 Identities=16% Similarity=0.165 Sum_probs=226.8
Q ss_pred chhHHHHHHHHHh--cHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHH
Q psy12312 28 LRTNVDTRLGFFI--GRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLY 105 (1045)
Q Consensus 28 VRDa~yt~~Al~~--l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~ 105 (1045)
+||++++++|++. ..++|+++++||..... +.+.++++|.. .|.|+ |+|.|+|++|++
T Consensus 342 ~RD~~~~~~al~~~G~~~~a~~~l~~l~~~q~--------------~~G~~~~~~~~-~G~p~-----w~~~Q~D~~g~~ 401 (684)
T 1lf6_A 342 SRDLYHVANAFIAAGDVDSANRSLDYLAKVVK--------------DNGMIPQNTWI-SGKPY-----WTGIQLDEQADP 401 (684)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--------------HHSSCCSCBCT-TSCBC-----CCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--------------CCCCcccceeC-CCCcc-----cCCccccchHHH
Confidence 7999999999994 89999999999986532 11245566664 45674 999999999999
Q ss_pred HHHHHHHHHcCCceeeCcchHHH-HHHHHHHHHHhCCCCCCCCcccCCCCCCCCCcchhhHHHHHHHHHHHHhhh-hhcC
Q psy12312 106 LLILAQMTASGLQIVFCLDEVAF-IQNLVFYIESAYCIPDYGIWERGDKSNHGLPELNASSIGMAKAALEAMNEL-DLFG 183 (1045)
Q Consensus 106 LlaL~qm~~sGl~ii~t~dev~f-IqnLV~yie~~wr~PD~GIWErr~k~N~g~~e~~asSigMa~AALeai~~~-~lfG 183 (1045)
|++++++.+.| -|.. |++.++|+.+.|+.||+|+||++.+ .|.++.+|+|+||+++..+ +.+|
T Consensus 402 l~~~~~~~~~g--------~~~~~v~~al~~i~~~~~~~~~g~WE~~~g-------~~~~t~~~~~~aL~~~a~lA~~~g 466 (684)
T 1lf6_A 402 IILSYRLKRYD--------LYDSLVKPLADFIIKIGPKTGQERWEEIGG-------YSPATMAAEVAGLTCAAYIAEQNK 466 (684)
T ss_dssp HHHHHHTTCGG--------GTTTTHHHHHHHHHHHCSSBSSCTTSSCCB-------BCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcC--------chHHHHHHHHHHHHHhCCCCCcccccccCC-------cCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999765554 5676 9999999999999999999999866 7788888999999975555 8888
Q ss_pred CCCCCcchhhchHHHHHHHHHHHHcc------------CCCC---------------------CCCcccccccchhhhcC
Q psy12312 184 ARGGPSSVIHVLADEAQKCQAVLQSM------------LPRE---------------------SSSKELDSGLLSVISFP 230 (1045)
Q Consensus 184 ~~g~~~svi~v~~D~i~r~~~il~~~------------Lpre---------------------s~SkevDASLL~ii~~p 230 (1045)
.++ ....|...+|++++ .+.+.+ +-|. ++++.+|||+|.++.+|
T Consensus 467 ~~~-~a~~~~~~a~~i~~--~i~~~~w~~~~~~g~~~~f~r~~~d~~~~~~~~~~~~~~~~~~~~~~~lDas~l~~~~~G 543 (684)
T 1lf6_A 467 DYE-SAQKYQEKADNWQK--LIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYDQKEIVDPSFLELVRLG 543 (684)
T ss_dssp CHH-HHHHHHHHHHHHHH--HHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEEGGGCCCGGGGHHHHTT
T ss_pred ChH-HHHHHHHHHHHHHH--HHHHhccCCCcccccCCeeEEEeccCCCccccccccccccccCCCCCcEeHHHhHHHhcC
Confidence 653 23466777777766 344322 2232 36789999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccC---C-ceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHHc
Q psy12312 231 AFAVDDPLLISETREAIVSKLRGK---Y-GCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCFQ 306 (1045)
Q Consensus 231 ~fav~Dp~~~~~T~~~I~~kL~g~---y-GvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~~ 306 (1045)
+++++|| ++.+|+++|+++|..+ | +++||..|+|+.. || -..|. ..|.|++|++|++|++...+..
T Consensus 544 ~~~~~dp-r~~~Tl~~i~~~L~~~~~~G~~~~RY~~d~y~~~-~~--G~~f~------~~g~g~~W~~~t~~~a~al~~~ 613 (684)
T 1lf6_A 544 VKSADDP-KILNTLKVVDSTIKVDTPKGPSWYRYNHDGYGEP-SK--TELYH------GAGKGRLWPLLTGERGMYEIAA 613 (684)
T ss_dssp SSCTTCH-HHHHHHHHHHHHSEEEETTEEEECSSTTCCCSCS-BT--TBCCS------SSSCCCBBHHHHHHHHHHHHHT
T ss_pred CcCCCCH-HHHHHHHHHHHHhccCCCCCCeEeccCCCCCCcc-cC--CCccc------cCCCCCchHHHHHHHHHHHHHh
Confidence 9999999 9999999999999765 4 7899999999642 11 11121 1345999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCC-CCccchhHHHHHHHH-Hhcc
Q psy12312 307 GDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGR-CPLLWAQSLYILGRL-LQHG 380 (1045)
Q Consensus 307 G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn-~PllWsqslyi~~~l-l~~~ 380 (1045)
|+ +|.+++++|... .++.++|||+|... .+.|.|| +||+|||+.||.+.. +.+|
T Consensus 614 G~--~A~~~~~~l~~~----a~~~gllpE~~~~~--------------~g~~~G~a~PqaWSha~~i~~~~~l~~~ 669 (684)
T 1lf6_A 614 GK--DATPYVKAMEKF----ANEGGIISEQVWED--------------TGLPTDSASPLNWAHAEYVILFASNIEH 669 (684)
T ss_dssp TC--CCHHHHHHHHHH----SCTTSCCCSCBCTT--------------TCCBCSSCSSCHHHHHHHHHHHHHHHHT
T ss_pred Ch--HHHHHHHHHHHh----cccCCccCeeecCC--------------CCCCCCCCcchHHHHHHHHHHHHHHhcC
Confidence 99 899999999998 56677999997522 5688988 999999999999875 3443
No 5
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.97 E-value=9.2e-31 Score=327.63 Aligned_cols=298 Identities=17% Similarity=0.169 Sum_probs=228.7
Q ss_pred chhHHHHHHHHH--hcHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHH
Q psy12312 28 LRTNVDTRLGFF--IGRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLY 105 (1045)
Q Consensus 28 VRDa~yt~~Al~--~l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~ 105 (1045)
+||++++++|+. |+.++|+++++||.+... .+.+.++++|+.++ .| .|+..|+|++|++
T Consensus 331 ~RDaa~t~~all~~G~~e~A~~~l~~L~~~Q~-------------~~~G~~~~~y~i~G-~~-----~w~~~Q~D~~g~~ 391 (1020)
T 1ulv_A 331 ARDMYQSVTALLAAGDEEAAARGVEWLFTYQQ-------------QPDGHFPQTSRVDG-TI-----GQNGIQLDETAFP 391 (1020)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTC-------------CTTSCCCSCBCTTS-CB-----CCCCCBTHHHHHH
T ss_pred cchHHHHHHHHHHcCCHHHHHHHHHHHHHHhc-------------CCCCCeeeEEecCC-Cc-----CCCCccCccchHH
Confidence 699999999998 489999999999985321 12345778898875 33 3777999999999
Q ss_pred HHHHHHHHHcCCceeeCcchHH-HHHHHHHHHHHhCCCCCCCCcccCCCCCCCCCcchhhHHHHHHHHHHHHhh-hhhcC
Q psy12312 106 LLILAQMTASGLQIVFCLDEVA-FIQNLVFYIESAYCIPDYGIWERGDKSNHGLPELNASSIGMAKAALEAMNE-LDLFG 183 (1045)
Q Consensus 106 LlaL~qm~~sGl~ii~t~dev~-fIqnLV~yie~~wr~PD~GIWErr~k~N~g~~e~~asSigMa~AALeai~~-~~lfG 183 (1045)
|++++++.+.+ .+-|. .|+..++|+.+.|+.||+|+||++.+ +|++|.+|||+||+++.. ++.+|
T Consensus 392 l~~~~~~~~~d------~~~w~~~v~~al~~i~~~g~~~~~~~WEe~~g-------~~~~t~~~~~~AL~~aa~lA~~~G 458 (1020)
T 1ulv_A 392 ILLANQIGRTD------AGFYRNELKPAADYLVAAGPKTPQERWEETGG-------YSTSTLASQIAALAAAADIAGKNG 458 (1020)
T ss_dssp HHHHHHHTCCC------HHHHHHTHHHHHHHHHHHCSCBSBCTTSSCCB-------EEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcC------HHHHHHHHHHHHHHHHHhCCCCChhhhcccCC-------cCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999965432 35688 99999999999999999999999865 899999999999997544 48888
Q ss_pred CCCCCcchhhchHHHHHHHHHHHHcc------------CCCC---------------------CCCcccccccchhhhcC
Q psy12312 184 ARGGPSSVIHVLADEAQKCQAVLQSM------------LPRE---------------------SSSKELDSGLLSVISFP 230 (1045)
Q Consensus 184 ~~g~~~svi~v~~D~i~r~~~il~~~------------Lpre---------------------s~SkevDASLL~ii~~p 230 (1045)
.++. ...|...+|++++ .+.+.+ +-|. ++++.+|||+|.++.+|
T Consensus 459 ~~~~-a~~w~~~Ad~i~~--~i~~~~w~~~g~~~~~g~f~r~~~dg~~~~~~~~~~~n~~~~~~~~~~lDas~l~l~~~G 535 (1020)
T 1ulv_A 459 DAGS-AAVYRATADEWQR--STEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFLEFVRLG 535 (1020)
T ss_dssp CHHH-HHHHHHHHHHHHH--THHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECSTTCCEEEGGGCCBGGGGHHHHTT
T ss_pred ChhH-HHHHHHHHHHHHH--HHHHhCCCCcccccccCeeEEEecCCCcccccccccccccccCCCCCeeeHHHHHHHHhC
Confidence 6432 2345556666654 333322 1122 35788999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccC---C-ceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHHc
Q psy12312 231 AFAVDDPLLISETREAIVSKLRGK---Y-GCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCFQ 306 (1045)
Q Consensus 231 ~fav~Dp~~~~~T~~~I~~kL~g~---y-GvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~~ 306 (1045)
+++++|| ++.+|+++|++.|..+ | +++||..|+|+... +-..|. -.|.++.|++|++|++..++..
T Consensus 536 ~~~~~dp-r~~~Tl~~i~~~L~~~~~~G~~~~RY~~D~Y~~~~---dG~~~~------~~g~g~~W~l~T~wlae~~~~~ 605 (1020)
T 1ulv_A 536 VKAPADP-YVADSLAETDASISQETPGGRMWHRYTYDGYGEKA---DGSPWD------GTGIGRLWPLLSGERGEYALAN 605 (1020)
T ss_dssp SSCTTCH-HHHHHHHHHHHHHEEEETTEEEECSBTTCCCSCCT---TSCCCS------SCCCCCBCTHHHHHHHHHHHHT
T ss_pred CCCCCcH-HHHHHHHHHHHHhcccCCCCceeecCCcccccccc---CCCccc------CCCCCChHHHHHHHHHHHHHHh
Confidence 9999999 9999999999999865 5 78999999985211 111111 0146899999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceeccc-CCCCccchhHHHHHHHHHhccC
Q psy12312 307 GDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIAL-GRCPLLWAQSLYILGRLLQHGF 381 (1045)
Q Consensus 307 G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~-gn~PllWsqslyi~~~ll~~~~ 381 (1045)
|+ +|.++++++... .+..+++||+|.-.. +.. .-++....|. ||+||+|||+.||.+..-+.+.
T Consensus 606 G~--~A~~~~~~l~~~----a~~~GllpEq~~~g~---~~~--~~~~~tG~p~~g~~PqaWSha~~I~~~~~l~~~ 670 (1020)
T 1ulv_A 606 GQ--DALPYLETMHSA----ANAGYMIPEQVWDRD---EPT--SYGHELGRSTGSASPLSWAMAQYVRLAAGVKAG 670 (1020)
T ss_dssp TC--CCHHHHHHHHHT----SCTTCCCCSCBBCCS---SCC--SSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHT
T ss_pred hH--HHHHHHHHHHHh----ccccCCcceeecccc---ccc--ccCCcCCccccCCcHHHHHHHHHHHHHHHHhCC
Confidence 99 799999999998 566779999974211 112 2233466888 9999999999999987754444
No 6
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.78 E-value=1.6e-18 Score=199.68 Aligned_cols=240 Identities=18% Similarity=0.183 Sum_probs=174.1
Q ss_pred hhhhHHHHHHHHHHHHHHcCCceeeCcchH-HHHHHHHHHHHHhCCCCC-CCCcccCCCC-----------------CCC
Q psy12312 97 LQIDAISLYLLILAQMTASGLQIVFCLDEV-AFIQNLVFYIESAYCIPD-YGIWERGDKS-----------------NHG 157 (1045)
Q Consensus 97 lQlDa~gl~LlaL~qm~~sGl~ii~t~dev-~fIqnLV~yie~~wr~PD-~GIWErr~k~-----------------N~g 157 (1045)
.|+|.++.+|.+++++.+.-....+-.+.| ..|+.++++++.-|+.++ .|+|+....+ +.|
T Consensus 177 yElDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tG 256 (489)
T 2p0v_A 177 WEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVG 256 (489)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSS
T ss_pred chhhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCC
Confidence 499999999999998877633444444677 799999999999999988 8999973211 224
Q ss_pred C-------------CcchhhHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCC----------CC
Q psy12312 158 L-------------PELNASSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLP----------RE 213 (1045)
Q Consensus 158 ~-------------~e~~asSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lp----------re 213 (1045)
. ..+|++|..|+|+||+++..+ ..+|........+...+++|++ .|.+.+.. +|
T Consensus 257 Li~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~--gI~~~gv~~~p~~G~ifAyE 334 (489)
T 2p0v_A 257 LIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEK--ALKKYAVCNHPKYGKIYAFE 334 (489)
T ss_dssp CCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH--HHHHHSEEEETTTEEEECSE
T ss_pred ceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH--HHHHhCEecCCCCccEEEEE
Confidence 4 578999999999999986665 6777432222234445555544 34332221 12
Q ss_pred ---CCC-----cccccccchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCce-eeccCCCCCCCCCCCCCCCCChhhhhc
Q psy12312 214 ---SSS-----KELDSGLLSVISFPAFAVDDPLLISETREAIVSKLRGKYGC-KRFLRDGYRTPKEDPNRLHYDPLELRM 284 (1045)
Q Consensus 214 ---s~S-----kevDASLL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGv-kRY~~Dgy~t~~ed~~r~~Y~~~e~~~ 284 (1045)
.|+ +..|+|||++|.+||++++|| ++++|++.|.+++- +|++ .|+ .+|.+. |+
T Consensus 335 VDG~G~~~~mDDanvpSLLslPylG~~~~dDp-iy~nTr~~IlS~~N-Pyy~~G~~-~~GIGs-----------pH---- 396 (489)
T 2p0v_A 335 VDGFGNQLLMDDANVPSLIALPYLGDVKVTDP-IYQNTRKFVWSEDN-PYFFKGSA-GEGIGG-----------PH---- 396 (489)
T ss_dssp ECSSSCEECCCCSSSSCSTTHHHHTSSCTTCH-HHHHHHHHHTSTTS-TTEEECSS-CEEECC-----------TT----
T ss_pred ecCCCCcccCCCCCccHHHHHHHhCCCCCCCH-HHHHHHHHHHhhcC-Cccccccc-ccCCCC-----------CC----
Confidence 233 677799999999999999999 99999999999983 5554 333 122211 00
Q ss_pred cCCCCcchhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCc
Q psy12312 285 FENIESEWPLFFCYLILDFCFQGDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPL 364 (1045)
Q Consensus 285 feg~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~Pl 364 (1045)
.+....|||+.+|.+ +-.++.++++++++++.+. ..|.||++|++.+. +..+-...||
T Consensus 397 -~~~~~~Wpmsll~~a---lts~d~~E~~~~L~~l~~t----~~gtGLmhEs~d~~--------------~~~~~TR~wF 454 (489)
T 2p0v_A 397 -IGYDMIWPMSIMMKA---FTSQNDAEIKTCIKMLMDT----DAGTGFMHESFNKN--------------DPKNFTRAWF 454 (489)
T ss_dssp -TCTTEECHHHHHHHH---HTCCCHHHHHHHHHHHHHT----STTSCSCCSEEETT--------------EEEEEECSCB
T ss_pred -CCCCchHHHHHHHHH---HhcCCHHHHHHHHHHHHhh----CCCCCeeeeeECCC--------------CCCcCCCccc
Confidence 122559999998777 5699999999999999988 68888999997654 2233446789
Q ss_pred cchhHHHHHHHHHh
Q psy12312 365 LWAQSLYILGRLLQ 378 (1045)
Q Consensus 365 lWsqslyi~~~ll~ 378 (1045)
+|+|++|....+.+
T Consensus 455 aWanslF~e~il~l 468 (489)
T 2p0v_A 455 AWQNTLFGELILKL 468 (489)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988755
No 7
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=99.41 E-value=2.3e-12 Score=147.93 Aligned_cols=240 Identities=17% Similarity=0.170 Sum_probs=159.6
Q ss_pred hhhhHHHHHHHHHHHHHHc-CCceeeCcchHHHHHHHHHHHHHhCCC--CCCCCcccCCCCCC-----------------
Q psy12312 97 LQIDAISLYLLILAQMTAS-GLQIVFCLDEVAFIQNLVFYIESAYCI--PDYGIWERGDKSNH----------------- 156 (1045)
Q Consensus 97 lQlDa~gl~LlaL~qm~~s-Gl~ii~t~dev~fIqnLV~yie~~wr~--PD~GIWErr~k~N~----------------- 156 (1045)
..+|-...+|...+++.+. |-.-.|+.+=+..++.++.-++.--+. +..=-|+|. ++.
T Consensus 160 yElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~--t~~~tdtl~~~G~G~pv~~t 237 (463)
T 3p2c_A 160 WEIDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRK--TERALDTVSNDGLGAPVKPV 237 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCC--BSCGGGSCHHHHTCSCCCCS
T ss_pred cHhhhhhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeec--CCCCCcccCCCCcCCCcCCC
Confidence 8899999999998888766 533444433345666666665543221 111122221 111
Q ss_pred -------------CCCcchhhHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCC-----------
Q psy12312 157 -------------GLPELNASSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLP----------- 211 (1045)
Q Consensus 157 -------------g~~e~~asSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lp----------- 211 (1045)
-.-..+..|-.|+|+||+++..+ ..++........+...+++|++ .|.+.+..
T Consensus 238 Gli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~--gI~k~gvv~~p~~G~iyAy 315 (463)
T 3p2c_A 238 GLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVET--ALKKYAVYNHPKYGKIYAF 315 (463)
T ss_dssp SCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH--HHHHHSEEEETTTEEEECS
T ss_pred CceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH--HHHHhCEecCCCCceEEEE
Confidence 12357899999999999986665 4443221111122334444433 33332222
Q ss_pred --CCCCC-----cccccccchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCCCChhhhhc
Q psy12312 212 --RESSS-----KELDSGLLSVISFPAFAVDDPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELRM 284 (1045)
Q Consensus 212 --res~S-----kevDASLL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~ 284 (1045)
..+|+ +..|+|||++|.+||++++|| ++++|++.|.+++ .+|.+++....|.+.+ +
T Consensus 316 EVDG~Gs~~lmDDaNvPSLLslPylGf~~~dDp-iYqNTrk~IlS~~-NPyY~~G~~~~GiG~P-----------H---- 378 (463)
T 3p2c_A 316 EVDGFGNHHLMDDANVPSLLAMPYLGDVNVNDP-IYQNTRRFVWSED-NPYFFKGKAGEGIGGP-----------H---- 378 (463)
T ss_dssp EECSSSCEECCCCSSSSCSTTHHHHTSSCTTCH-HHHHHHHHHTSTT-STTEEECSSCEEECCT-----------T----
T ss_pred EEecCCCccCCCCCCchhHHHHHHcCCCCCCCH-HHHHHHHHHHhcc-CCceeccCccccCCCC-----------C----
Confidence 11444 778899999999999999999 9999999999996 6787777765544321 0
Q ss_pred cCCCCcchhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCc
Q psy12312 285 FENIESEWPLFFCYLILDFCFQGDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPL 364 (1045)
Q Consensus 285 feg~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~Pl 364 (1045)
-+....|||+.+ +.++-.++.+++++.+++|.+. ..|.||++|++.+. +-.+-...||
T Consensus 379 -~~~~~~Wpmsll---~~~lTs~d~~Ei~~~L~~l~~t----~~gtGlmHEsvd~~--------------~~~~~TR~WF 436 (463)
T 3p2c_A 379 -IGYDMVWPMSIM---MKAFTSQNDAEIKTCIKMLMDT----DAGTGFMHESFHKD--------------NPKKFTRAWF 436 (463)
T ss_dssp -TCTTEECHHHHH---HHHHTCCCHHHHHHHHHHHHHT----STTSSSCCSEEETT--------------EEEEEECSCB
T ss_pred -CCCCCchHHHHH---HHHhccCCHHHHHHHHHHHHhc----CCCCCeeeeeECCC--------------CCCcCCCCch
Confidence 123458999994 6677799999999999999998 67888999997554 2223345689
Q ss_pred cchhHHHHHHHHHhc
Q psy12312 365 LWAQSLYILGRLLQH 379 (1045)
Q Consensus 365 lWsqslyi~~~ll~~ 379 (1045)
+|+|++|....+-+.
T Consensus 437 aWaNs~F~elil~l~ 451 (463)
T 3p2c_A 437 AWQNTLFGELILKLV 451 (463)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHH
Confidence 999999999887544
No 8
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=99.25 E-value=3.7e-11 Score=136.84 Aligned_cols=242 Identities=14% Similarity=0.149 Sum_probs=157.2
Q ss_pred hhhhhHHHHHHHHHHHHHHc-CCceeeCcchHHHHHHHHHHHHHh--------CCC--C------------------CCC
Q psy12312 96 HLQIDAISLYLLILAQMTAS-GLQIVFCLDEVAFIQNLVFYIESA--------YCI--P------------------DYG 146 (1045)
Q Consensus 96 hlQlDa~gl~LlaL~qm~~s-Gl~ii~t~dev~fIqnLV~yie~~--------wr~--P------------------D~G 146 (1045)
...+|-...+|...+++.+. |-.-.|+.+=+..++.++.-++.- |+= + -.|
T Consensus 131 KyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tG 210 (427)
T 3qt9_A 131 KYEIDSLCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTG 210 (427)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCS
T ss_pred ccHHhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCC
Confidence 38899999999988888765 533344433345666666554431 210 0 023
Q ss_pred CcccC--CCCCCCCCcchhhHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCC----------C-
Q psy12312 147 IWERG--DKSNHGLPELNASSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLP----------R- 212 (1045)
Q Consensus 147 IWErr--~k~N~g~~e~~asSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lp----------r- 212 (1045)
|.--+ ---.--.-..+..|-.|+|+||+++..+ ...+........+...+++|++ .|.+.... .
T Consensus 211 li~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~--aI~k~gvv~~p~~G~iyAyE 288 (427)
T 3qt9_A 211 MTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDN--AIEKHGKVYKEGFGEVYAYE 288 (427)
T ss_dssp SCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH--HHHHHSEEEETTTEEEECSE
T ss_pred ceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH--HHHHhcEecCCCcceEEEEE
Confidence 22211 0000112357899999999999976655 5443221111122333344433 23322222 1
Q ss_pred --CCCC-----cccccccchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCCCChhhhhcc
Q psy12312 213 --ESSS-----KELDSGLLSVISFPAFAVDDPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELRMF 285 (1045)
Q Consensus 213 --es~S-----kevDASLL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~f 285 (1045)
.+|+ +..|+|||++|.+||++++|| .+++|++.|.+++ .+|.++++...|.+.+ +
T Consensus 289 VDG~Gs~~lMDDaNvPSLLslPylGf~~~dDp-iYqNTrk~IlS~~-NPyy~~G~~~~GIG~P-----------H----- 350 (427)
T 3qt9_A 289 TDGMGNYNFMDDANVPSLLSIPYLEYKGIEDE-VYQNTRKFILSKN-NRFFFEGKAAKGIGSP-----------H----- 350 (427)
T ss_dssp ECSSSCEECCCCSSSSCSTTHHHHTSSCTTCH-HHHHHHHHHTSTT-STTEEECSSCEEECCT-----------T-----
T ss_pred eccCCCccccCCCCchhHHHHHHcCCCCCCCH-HHHHHHHHHhccc-CCceeccCccCcCCCC-----------C-----
Confidence 2454 778899999999999999999 9999999999997 6788887765554321 1
Q ss_pred CCCCcchhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCcc
Q psy12312 286 ENIESEWPLFFCYLILDFCFQGDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLL 365 (1045)
Q Consensus 286 eg~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~Pll 365 (1045)
-+....|||.. +..++-.++.+++++.+++|.+. ..|.||++|.+.+. +|..- ..-+|+
T Consensus 351 ~~~~~~Wpmsl---~~~~lTs~d~~Ei~~~L~~l~~t----~~gtGlmHEsvd~~---------~~~~~-----TR~WFa 409 (427)
T 3qt9_A 351 TPDQYIWHIAL---SMQGLTTNNQEEIDQLIKLLKET----DAGTGYMHEGFHVD---------DPTKF-----TRDWFA 409 (427)
T ss_dssp SCTTEEEHHHH---HHHHHTCCCHHHHHHHHHHHHHT----STTSSSCCSEEETT---------EEEEE-----SCSCBH
T ss_pred CCCCCchHHHH---HHHHhhcCCHHHHHHHHHHHHhc----CCCCCeeeeeECCC---------CCCcc-----CCCcch
Confidence 13455999998 47777799999999999999988 67888999996554 22222 245799
Q ss_pred chhHHHHHHHHHh
Q psy12312 366 WAQSLYILGRLLQ 378 (1045)
Q Consensus 366 Wsqslyi~~~ll~ 378 (1045)
|++++|....|-+
T Consensus 410 WaN~lF~elil~l 422 (427)
T 3qt9_A 410 WSNSLFSHFIYEK 422 (427)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 9999998877643
No 9
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=99.23 E-value=6e-11 Score=135.07 Aligned_cols=243 Identities=16% Similarity=0.105 Sum_probs=157.6
Q ss_pred hhhhhHHHHHHHHHHHHHHc-CCceeeCcchHHHHHHHHHHHHHhCC-CCCCCCcccCCC--------------CC-C--
Q psy12312 96 HLQIDAISLYLLILAQMTAS-GLQIVFCLDEVAFIQNLVFYIESAYC-IPDYGIWERGDK--------------SN-H-- 156 (1045)
Q Consensus 96 hlQlDa~gl~LlaL~qm~~s-Gl~ii~t~dev~fIqnLV~yie~~wr-~PD~GIWErr~k--------------~N-~-- 156 (1045)
...+|-...+|...+++.+. |-.-.|+.+=+..++.++.-++.--+ .+..=-|+|.+. .| .
T Consensus 130 KyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGl 209 (426)
T 3qry_B 130 KYEVDSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGM 209 (426)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSS
T ss_pred ccHHhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCc
Confidence 38899999999988888766 53334443334566666665554111 111111222100 00 0
Q ss_pred -----------CCCcchhhHHHHHHHHHHHHhhh-h---hcCCCCCCcchhhchHHHHHHHHHHHHccCCC---------
Q psy12312 157 -----------GLPELNASSIGMAKAALEAMNEL-D---LFGARGGPSSVIHVLADEAQKCQAVLQSMLPR--------- 212 (1045)
Q Consensus 157 -----------g~~e~~asSigMa~AALeai~~~-~---lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpr--------- 212 (1045)
-.-..+..|-.|+|+||+++..+ + .+|... ....+...+++|++ .|.+.....
T Consensus 210 i~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~-la~~~~~la~eIr~--~I~k~gvv~h~~~g~iyA 286 (426)
T 3qry_B 210 TWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQS-VIADAKRLQDEIQE--GIKNYAYTTNSKGEKIYA 286 (426)
T ss_dssp CCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHH-HHHHHHHHHHHHHH--HHHHHSEEECTTCCEEEC
T ss_pred eecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHH-HHHHHHHHHHHHHH--HHHHhcEecCCCcceEEE
Confidence 12357899999999999976655 4 334221 11122223333333 233222211
Q ss_pred ----CCCC-----cccccccchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCCCChhhhh
Q psy12312 213 ----ESSS-----KELDSGLLSVISFPAFAVDDPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELR 283 (1045)
Q Consensus 213 ----es~S-----kevDASLL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~ 283 (1045)
.+|+ +..|+|||++|.+||++++|| .+++|++.|.+++ .+|.++++...|.+.+ +
T Consensus 287 yEVDG~Gs~~lmDDaNvPSLLslPylGf~~~dDp-iYqNTrk~IlS~~-NPyy~~G~~~~GiG~P-----------H--- 350 (426)
T 3qry_B 287 FEVDGLGNASIMDDPNVPSLLAAPYLGYCSVDDE-VYQATRRTILSSE-NPYFYQGEYASGLGSS-----------H--- 350 (426)
T ss_dssp SEECSSSCBCCCCCSSSSCSTTTTTTTSSCTTCH-HHHHHHHHHTSTT-STTEEECSSCEEECCT-----------T---
T ss_pred EEeccCCCccccCCCCchhHHHHHHcCCCCCCCH-HHHHHHHHHhccc-CCceeccCccCcCCCC-----------C---
Confidence 1444 778899999999999999999 9999999999997 6787777765544321 1
Q ss_pred ccCCCCcchhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCC
Q psy12312 284 MFENIESEWPLFFCYLILDFCFQGDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCP 363 (1045)
Q Consensus 284 ~feg~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~P 363 (1045)
-+....|||.. +..++-.++.+++++.+++|.+. ..|.||++|.+.+. +|..-+ .-+
T Consensus 351 --~~~~~~Wpmsl---~~~~lTs~d~~Ei~~~L~~l~~t----~~gtGlmHEsvd~~---------~~~~~T-----R~W 407 (426)
T 3qry_B 351 --TFYRYIWPIAL---SIQGLTTRDKAEKKFLLDQLVAC----DGGTGVMHESFHVD---------DPTLYS-----REW 407 (426)
T ss_dssp --SCTTEECHHHH---HHHHHTCSCHHHHHHHHHHHHHT----STTSSSCCSEEETT---------EEEEEE-----CSC
T ss_pred --CCCCCchHHHH---HHHHHhCCCHHHHHHHHHHHHhc----CCCCCeeeeeECCC---------CCCccC-----CCc
Confidence 12345899998 47777789999999999999887 67888999996554 232222 356
Q ss_pred ccchhHHHHHHHHHhcc
Q psy12312 364 LLWAQSLYILGRLLQHG 380 (1045)
Q Consensus 364 llWsqslyi~~~ll~~~ 380 (1045)
|+|++++|....|-+.|
T Consensus 408 FaWaN~lF~elil~~~~ 424 (426)
T 3qry_B 408 FSWANMMFCELVLDYLD 424 (426)
T ss_dssp CHHHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHhc
Confidence 99999999988876654
No 10
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=98.24 E-value=1.7e-05 Score=97.65 Aligned_cols=111 Identities=5% Similarity=-0.051 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHH--HhccCCceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHH-cCCHHHH
Q psy12312 236 DPLLISETREAIVS--KLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCF-QGDEARV 312 (1045)
Q Consensus 236 Dp~~~~~T~~~I~~--kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~-~G~~e~A 312 (1045)
++++..++++.|.+ +|.+.||+.-...+. .+|++.. ..+ -..|+ ...|+++.++. .|+.++|
T Consensus 642 ~~e~a~~vl~~L~~~~~l~t~~Girtls~~~----------p~y~p~~---yw~-GpvW~-~~~~lli~aL~~~G~~d~A 706 (761)
T 3c68_A 642 TQANADAVVKVMLDPKEFNTFVPLGTAALTN----------PAFGADI---YWR-GRVWV-DQFWFGLKGMERYGYRDDA 706 (761)
T ss_dssp CHHHHHHHHHHHTCTTTTCCSSCSCSSCTTC----------TTCCTTC---TTT-TCEEH-HHHHHHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHHHhChhhhcCCCCccccCCCC----------cccCCCc---ccc-CCccc-chHHHHHHHHHHcCCHHHH
Confidence 45588898888875 677777876322210 1122210 111 12899 66688666555 9999999
Q ss_pred HHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCccchhHHHHHHHH
Q psy12312 313 KEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLLWAQSLYILGRL 376 (1045)
Q Consensus 313 ~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~PllWsqslyi~~~l 376 (1045)
.++.+++...... -...+.++|.|... ...|.|..||.||++.++....
T Consensus 707 ~~l~~~~~~~~~~-~~~~G~~~E~yd~~--------------tg~p~G~~~fgWSaa~~l~ll~ 755 (761)
T 3c68_A 707 LKLADTFFRHAKG-LTADGPIQENYNPL--------------TGAQQGAPNFSWSAAHLYMLYN 755 (761)
T ss_dssp HHHHHHHHHHSTT-TTSSSCCCSEECTT--------------TCCEESCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhhCCceeeEecCC--------------CCCcCcCCCchHHHHHHHHHHH
Confidence 9999988764211 11234899998654 2356788999999998877543
No 11
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=98.08 E-value=0.00014 Score=82.85 Aligned_cols=163 Identities=12% Similarity=0.073 Sum_probs=91.4
Q ss_pred HHHHHHHHH-HhhhhhcCCCCCCcchhhchHHHHHHHHHHHHccCCCCC--------CCc----ccccccchhhhcCCCC
Q psy12312 167 GMAKAALEA-MNELDLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRES--------SSK----ELDSGLLSVISFPAFA 233 (1045)
Q Consensus 167 gMa~AALea-i~~~~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpres--------~Sk----evDASLL~ii~~p~fa 233 (1045)
++.+.+++. ++.+..+|.+ ...+...++.+++ .+.+ ++..+. .++ ..-++.+....++.++
T Consensus 239 a~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~--ai~~-~Wd~~~g~~~d~~~~~g~~~~~~~~~~~~pL~~g~~~ 312 (420)
T 2z07_A 239 AILQRANRDLYALAVLLQED---PYEIEEWIVRGEV--GLEA-LWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPH 312 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHH--HHHH-TEETTTTEECCEETTTTEECCCCBGGGGTHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHH--HHHH-hhCcccCeeEeeeCCCCCeeccccHHhHHHHHcCCCC
Confidence 344445554 4444788865 3234444444433 4444 554321 111 1223333333356544
Q ss_pred CCCHHHHHHHHHHHHHHhc--cCCceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHH-cCCHH
Q psy12312 234 VDDPLLISETREAIVSKLR--GKYGCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCF-QGDEA 310 (1045)
Q Consensus 234 v~Dp~~~~~T~~~I~~kL~--g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~-~G~~e 310 (1045)
.+ ...+.++.+. +|. ..||+.....++ .+|++. ..-.|. .||... |+++.++. .|..+
T Consensus 313 ~~---~a~~v~~~l~-~~~~~~~~gi~t~~~~~----------~~y~~~--~yw~gp--vW~~~~-~~~~~gL~~~G~~~ 373 (420)
T 2z07_A 313 QG---RASLLAQEAE-RWGEKARYLLPSVDPTS----------PFFEPG--RYWRGP--VWINVN-WMVAEGFRDYGFAA 373 (420)
T ss_dssp HH---HHHHHHHHHH-HHTTTCSSSCBSBCTTS----------TTCCTT--STTSSC--BCHHHH-HHHHHHHHHTTCHH
T ss_pred HH---HHHHHHHHHH-HHhccCCCCcCcCCCcC----------cccCCc--CCCCCC--cchhHH-HHHHHHHHHcCCHH
Confidence 33 4444444443 665 667887765432 123332 112344 899888 56555555 99999
Q ss_pred HHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCccchhHHHHH
Q psy12312 311 RVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLLWAQSLYIL 373 (1045)
Q Consensus 311 ~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~PllWsqslyi~ 373 (1045)
.|.++.+++..... .++ +.|.|.+. +..|.|..||.||.+.++.
T Consensus 374 ~A~~l~~~~~~~~~--~~~---~~E~yd~~--------------~g~~~g~~~fgWs~~~~l~ 417 (420)
T 2z07_A 374 LAARLKADALALME--REG---FREYYDPL--------------TGQGRGGEGFSWSAALALF 417 (420)
T ss_dssp HHHHHHHHHHHHHH--HHC---SEEEECTT--------------TCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCC---eeeeeCCC--------------CCCcCCCCCCchHHHHHHH
Confidence 99999998877653 233 56988654 2356677899999998875
No 12
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=97.56 E-value=0.00017 Score=88.99 Aligned_cols=210 Identities=12% Similarity=0.058 Sum_probs=119.5
Q ss_pred hHHHHHHHHHHHHHHcCCceeeCcchHH-----------HHHHHHHHHHHhCCCCCCCCcccC-----CCCCCCCCcchh
Q psy12312 100 DAISLYLLILAQMTASGLQIVFCLDEVA-----------FIQNLVFYIESAYCIPDYGIWERG-----DKSNHGLPELNA 163 (1045)
Q Consensus 100 Da~gl~LlaL~qm~~sGl~ii~t~dev~-----------fIqnLV~yie~~wr~PD~GIWErr-----~k~N~g~~e~~a 163 (1045)
|....++++++++.+......+-.+.|. -++..++|+.+.+ .| .|++.-+ |..|-| .-..+
T Consensus 426 D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~-~~-~GL~~~~~~DW~D~~~~~-~g~~v 502 (807)
T 1v7w_A 426 DDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYV-GQ-TGICKGLRADWNDCLNLG-GGESS 502 (807)
T ss_dssp SGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSB-CT-TSCBEEETCSSSTTCCCE-EEEEH
T ss_pred chhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcC-CC-CCCcccCCCCCCCcCCCC-CCeeh
Confidence 9999999999887754223222223333 4888888887743 33 4664321 112333 33556
Q ss_pred hHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCCCC-------C-------CCcc-----ccc-c
Q psy12312 164 SSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRE-------S-------SSKE-----LDS-G 222 (1045)
Q Consensus 164 sSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpre-------s-------~Ske-----vDA-S 222 (1045)
..-++.+.||+++..+ ..+|.+... ..+...++.+++ .+.+.++..+ . +++. +++ +
T Consensus 503 ~~~a~~y~al~~~a~la~~lG~~~~a-~~~~~~A~~lk~--~~~~~~w~~~~~~f~~~~~~d~~~~g~~~~~~~~~~~~~ 579 (807)
T 1v7w_A 503 MVSFLHFWALQEFIDLAKFLGKDQDV-NTYTEMAANVRE--ACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEGRVHLES 579 (807)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHHH--HHHHHSEETTTTEECCEECTTSCEESCTTCSSCCEEHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHH--HHHHhccCCCCCeeeeeeccCCCCcCCccCCCCcCcccc
Confidence 7778899999976655 788854221 123333333433 3333343311 1 1111 111 1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCC-CCCCChhhhhccCCCCcchhhhHHHHHH
Q psy12312 223 LLSVISFPAFAVDDPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPN-RLHYDPLELRMFENIESEWPLFFCYLIL 301 (1045)
Q Consensus 223 LL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~-r~~Y~~~e~~~feg~E~ewplf~~~l~i 301 (1045)
....+.+++ -|+++..+++++|.++|..++|++ -..-.|.+...|+. ...|.++ .....+.|+..+.|++.
T Consensus 580 ~~~al~~g~---~~~e~a~~~l~~v~~~L~~~~G~~-~~~p~~~~~~~~~g~~~~y~~~----~~enG~~~~~~~~w~~~ 651 (807)
T 1v7w_A 580 NTLAVLSGL---ASQERGEQAMDAVDEHLFSPYGLH-LNAPSFSTPNDDIGFVTRVYQG----VKENGAIFSHPNPWAWV 651 (807)
T ss_dssp HHHHHHTTC---SCHHHHHHHHHHHHHHHEETTEEC-SEESCCCSCCTTTCGGGGSCTT----BTTBTSEESTTHHHHHH
T ss_pred hHHHHhhCC---CCHHHHHHHHHHHHHhcCCCCcee-ecCCcccccCcCCceeeccCCc----cccccccccchHHHHHH
Confidence 122234554 355699999999999998778853 22111211111110 0122221 12356799999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhh
Q psy12312 302 DFCFQGDEARVKEYGEALDKVM 323 (1045)
Q Consensus 302 ~~i~~G~~e~A~ey~e~L~~~~ 323 (1045)
.++..|+.++|.++++++....
T Consensus 652 al~~~G~~d~A~~l~~~~~p~~ 673 (807)
T 1v7w_A 652 AETKLGRGDRAMKFYDALNPYN 673 (807)
T ss_dssp HHHHTTCHHHHHHHHHHHCGGG
T ss_pred HHHHcCCHHHHHHHHHHhChhh
Confidence 8888999999999999987653
No 13
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=97.24 E-value=0.004 Score=78.55 Aligned_cols=197 Identities=9% Similarity=-0.030 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHcCCceeeCcchHHHHHHHHHHHHHhCCCCCCCCcccCC-CC---CC---CCCcchhhHHHHHHHH
Q psy12312 100 DAISLYLLILAQMTASGLQIVFCLDEVAFIQNLVFYIESAYCIPDYGIWERGD-KS---NH---GLPELNASSIGMAKAA 172 (1045)
Q Consensus 100 Da~gl~LlaL~qm~~sGl~ii~t~dev~fIqnLV~yie~~wr~PD~GIWErr~-k~---N~---g~~e~~asSigMa~AA 172 (1045)
|....++.+++.+.+......+-.+.|..++..++|+.+.+ .+ .|+|+.+. .. +. ...-.++.+.++++.|
T Consensus 628 ~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~-d~-~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~a 705 (956)
T 2okx_A 628 NWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHI-DD-SGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKA 705 (956)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTB-CT-TSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcC-CC-CCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHH
Confidence 44445677777766543233333456888888899988755 34 48887421 10 00 0112478888999999
Q ss_pred HHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCCCC---CC-----C-----cccccccchhhhcCCCCCCCHH
Q psy12312 173 LEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRE---SS-----S-----KELDSGLLSVISFPAFAVDDPL 238 (1045)
Q Consensus 173 Leai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpre---s~-----S-----kevDASLL~ii~~p~fav~Dp~ 238 (1045)
|+++..+ +.+|.+... ..+...++.+++ .+.+.++..+ +. + ...++|.+..+.+++++.++.
T Consensus 706 l~~~a~lA~~LG~~~~a-~~y~~~A~~lk~--ai~~~~wd~~~g~y~d~~~~~g~~~~~~~~~s~~lall~Gl~p~~~~- 781 (956)
T 2okx_A 706 LRDSRALAAAAGATEEA-DAFAARADLLAE--TINAVLWDEEKRAYIDCIHADGRRSDVYSMQTQVVAYLCGVAQGERE- 781 (956)
T ss_dssp HHHHHHHHHHTTCGGGG-HHHHHHHHHHHH--HHHHHSEETTTTEECSEECTTSCBCCCCBHHHHHHHHHTTCSCHHHH-
T ss_pred HHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHHhcCCCCCEEEeeecCCCCcccccccHHHHHHHHhCCCCHHHH-
Confidence 9975555 888865432 233334444433 3333333321 11 1 113677766677888655433
Q ss_pred HHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHHcCCHHHHHHHHHH
Q psy12312 239 LISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCFQGDEARVKEYGEA 318 (1045)
Q Consensus 239 ~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~ 318 (1045)
++| ++|..+. .+||. +.-+.|+ .+|++......|+.++|.+++++
T Consensus 782 ------~av-~~Ll~~~------~~gy~--------------------~~Gt~w~--~~~li~aLar~G~~d~A~~ll~~ 826 (956)
T 2okx_A 782 ------AVI-EGYLSSP------PPAFV--------------------QIGSPFM--SFFYYEALEKAGRQTLMLDDIRR 826 (956)
T ss_dssp ------HHH-HHHHHSC------CTTSB--------------------CCCSHHH--HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------HHH-HHHhcCC------Ccccc--------------------cCCChhH--HHHHHHHHHHCCCHHHHHHHHHH
Confidence 234 5554321 23441 1234784 45767777779999999999987
Q ss_pred HHhhhhccCCCceeccccccc
Q psy12312 319 LDKVMVQGEEGMKFVPQLYAV 339 (1045)
Q Consensus 319 L~~~~~~~~~g~~LlPE~Y~V 339 (1045)
+...+. ..|..-+||.|..
T Consensus 827 ~~~~~~--~~g~tt~~E~~d~ 845 (956)
T 2okx_A 827 NYGQML--RYDATTCWEMYPN 845 (956)
T ss_dssp HHHHHH--HTTCSSCCSSCSS
T ss_pred HHHHHH--hcCCCccceeccC
Confidence 666544 3565579999864
No 14
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=96.76 E-value=0.02 Score=67.89 Aligned_cols=208 Identities=12% Similarity=0.074 Sum_probs=111.9
Q ss_pred HHHhCCCCCCCCcccCCCCCCCCCcchhhH------HHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHc
Q psy12312 136 IESAYCIPDYGIWERGDKSNHGLPELNASS------IGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQS 208 (1045)
Q Consensus 136 ie~~wr~PD~GIWErr~k~N~g~~e~~asS------igMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~ 208 (1045)
.+..|. ++..|+...+ -..++++.+ -+....|+..+..+ ..+|..... ..+...++.+.+ .+.+.
T Consensus 277 ~eSGwD--~s~R~~~~~~---~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~lG~~~~a-~~~~~~A~~lk~--ai~~~ 348 (535)
T 2jg0_A 277 AASGWD--FSSRWMDNPQ---QLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMA-NQYETLANARQK--GIEKY 348 (535)
T ss_dssp HHTTCC--SCGGGBSSTT---CGGGBCGGGEECHHHHHHHHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHHH--HHHHH
T ss_pred HhCCCC--CccccCCCCC---cccccCCccchhhHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHh
Confidence 455777 5588885432 223344444 34444555554444 778854211 122223333322 33333
Q ss_pred cCCCCCC------------CcccccccchhhhcCCCCCCCHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCC
Q psy12312 209 MLPRESS------------SKELDSGLLSVISFPAFAVDDPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLH 276 (1045)
Q Consensus 209 ~Lpres~------------SkevDASLL~ii~~p~fav~Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~ 276 (1045)
++..+.| .+...++.+....++.+ ++++..+.++.+.++|...||+.....+ + ..+
T Consensus 349 fWdee~G~y~D~~~~~~~~~~~~~~s~~~PL~~gi~---~~e~a~~v~~~l~~~l~t~~GlrT~s~~--------s-~~y 416 (535)
T 2jg0_A 349 LWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAA---AKDRANKMATATKTHLLQPGGLNTTSVK--------S-GQQ 416 (535)
T ss_dssp SEETTTTEECCEETTTTEECCCCBGGGGHHHHTTCS---CHHHHHHHHHHHHHHTEETTEECSBSCC--------C-SSS
T ss_pred CcCCCCCEEEEEeCCCCCEeeeehhhhHHHHhcCCC---CHHHHHHHHHHHHHHhccCCCCCCCcCC--------C-ccc
Confidence 4443211 12233444443334543 4568888999998899888898776521 1 112
Q ss_pred CChhhhhccCCCCcchhhhHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcce
Q psy12312 277 YDPLELRMFENIESEWPLFFCYLILDFCF-QGDEARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVE 355 (1045)
Q Consensus 277 Y~~~e~~~feg~E~ewplf~~~l~i~~i~-~G~~e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~ 355 (1045)
+. | -+.|+... |+++.++. .|..+.|.++.+++.......-...+.+||.|.+... .....+ .
T Consensus 417 W~--------G-pNvW~~~~-~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~---~~~G~g---g 480 (535)
T 2jg0_A 417 WD--------A-PNGWAPLQ-WVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTT---GTGGGG---G 480 (535)
T ss_dssp SS--------T-TEECHHHH-HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSS---SCBCCC---S
T ss_pred cC--------C-CCcchhHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCC---CCCCCC---C
Confidence 22 1 13799888 66666665 9999999988866555433200122489999976422 011111 1
Q ss_pred ecccCCCCccchhHHHHHHHHHhcc
Q psy12312 356 RIALGRCPLLWAQSLYILGRLLQHG 380 (1045)
Q Consensus 356 r~p~gn~PllWsqslyi~~~ll~~~ 380 (1045)
..|+ ..||.||++.++.....+..
T Consensus 481 eY~~-~~~fgWT~av~l~ll~~y~~ 504 (535)
T 2jg0_A 481 EYPL-QDGFGWTNGVTLKMLDLICP 504 (535)
T ss_dssp SSCC-CBSCHHHHHHHHHHHHHHSC
T ss_pred CCCC-CCCChhHHHHHHHHHHHhhh
Confidence 1121 37899999998865554433
No 15
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=96.13 E-value=0.15 Score=63.57 Aligned_cols=271 Identities=12% Similarity=0.005 Sum_probs=150.9
Q ss_pred chhHHHHHHHHHh-cHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHHH
Q psy12312 28 LRTNVDTRLGFFI-GRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLYL 106 (1045)
Q Consensus 28 VRDa~yt~~Al~~-l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~L 106 (1045)
.||+...++|+.- ..+.|++.+ +.+...| ...+...+.|.+.++..+ .+....+ .|..-.++
T Consensus 366 ~RD~~qd~~~~~~~~pe~ar~~i---l~~~~~Q-----------~~dG~v~h~~~p~~~~g~-~~~~~~~--~D~~lWl~ 428 (822)
T 3rrs_A 366 FRDSNQDLLGFVHLIPERARERI---IDIASTQ-----------FADGSAYHQYQPLTKRGN-NDIGSGF--NDDPLWLI 428 (822)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHH---HHHHTTC-----------CTTSCCCSEEETTTTEEC-TTTCSCB--TTHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHH---HHHHHhh-----------cccCcccceecCcCCCCc-cCCCCcc--cchHhHHH
Confidence 8999999999874 566666643 4444443 233444445554443322 0001222 79988899
Q ss_pred HHHHHHHHcCCceeeCcc-------------hHHHHHHHHHHHHHh-----CCCCCCCCcccCCCCC-----CC------
Q psy12312 107 LILAQMTASGLQIVFCLD-------------EVAFIQNLVFYIESA-----YCIPDYGIWERGDKSN-----HG------ 157 (1045)
Q Consensus 107 laL~qm~~sGl~ii~t~d-------------ev~fIqnLV~yie~~-----wr~PD~GIWErr~k~N-----~g------ 157 (1045)
++++.+++.-....+-.+ -++.+..-++|+... .....+|=|..+-..| -|
T Consensus 429 ~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GLp~~g~gDWnD~ln~~~~~~~vg~~~~~~ 508 (822)
T 3rrs_A 429 AGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRGPHGLPLIGRADWNDCLNLNCFSTTPGESFQTT 508 (822)
T ss_dssp HHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBCTTSSBBCBTCSSSTTCCTTCCCCSTTCCTTTC
T ss_pred HHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCCCCCCcccCCCcchhhccccccccccccccccc
Confidence 999988765223222211 134455556665532 2222344487541110 11
Q ss_pred -----CCcchhhHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCCCC-----C-------CCcc-
Q psy12312 158 -----LPELNASSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRE-----S-------SSKE- 218 (1045)
Q Consensus 158 -----~~e~~asSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpre-----s-------~Ske- 218 (1045)
..-..+..-++...||..+..+ ..+|..... ..+...++.+.+ .+.+.++..+ . +|+.
T Consensus 509 ~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~~~~A-~~~~~~A~~lk~--a~~~~~Wdg~~y~ra~d~dg~~~gs~~~ 585 (822)
T 3rrs_A 509 ENQAGGVAESTFIAAQFVLYGEQYAELAARRGLADVA-DRARGHVAEMRD--ALLTDGWDGSWFLRAYDYYGNPIGTDAH 585 (822)
T ss_dssp CSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHHH--HHHTTTBCSSSBCCEECTTSCEESCTTS
T ss_pred ccccCCccccHHHHHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHH--HHHHhccCcceeEEEEcCCCCCccccCC
Confidence 1123356666777899875555 778743211 122222333322 2222233321 1 1111
Q ss_pred ----cccc-cchhhhcCCCCCC-----CHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCC-CCCChhhhhccCC
Q psy12312 219 ----LDSG-LLSVISFPAFAVD-----DPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNR-LHYDPLELRMFEN 287 (1045)
Q Consensus 219 ----vDAS-LL~ii~~p~fav~-----Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r-~~Y~~~e~~~feg 287 (1045)
+++. .-+.++.|+..++ |+ +..+.++.|.++|..++|+ |=+...|.+...|+.. ..|.|+ -..
T Consensus 586 ~~~~i~~~~q~~avlsGia~~e~~~~~~~-~a~~al~~v~~~L~t~~Gi-rll~p~f~~~~~~~g~~~~Y~pg----~~e 659 (822)
T 3rrs_A 586 DEGKIWIEPQGFAVMAGVGVGEGPQDTDA-PAIKALDSVNEMLATDHGM-VLQYPAYTTYQVHMGEVSTYPPG----YKE 659 (822)
T ss_dssp SSCCEEHHHHHHHHHTTTTCCSSTTCTTS-HHHHHHHHHHHHTEETTEE-BSEESCCSSCCTTSTTGGGSCTT----BTT
T ss_pred CCceEEeccchhHhhcCCCCcccccchHH-HHHHHHHHHHHHcCCCCeE-EEcCCCcccccCCCCcccccCCC----ccc
Confidence 2211 0123345665555 55 8999999999999999998 5554444332233322 234433 223
Q ss_pred CCcchhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Q psy12312 288 IESEWPLFFCYLILDFCFQGDEARVKEYGEALDKVMV 324 (1045)
Q Consensus 288 ~E~ewplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~ 324 (1045)
.-+.|+--..|.++..+..|+.++|.+++..|.....
T Consensus 660 nG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~ 696 (822)
T 3rrs_A 660 NGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPAYR 696 (822)
T ss_dssp BTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHHHH
T ss_pred cccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcccc
Confidence 4568999999999999999999999999999998865
No 16
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=96.11 E-value=0.093 Score=65.19 Aligned_cols=269 Identities=12% Similarity=0.050 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHh-cHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHHH
Q psy12312 28 LRTNVDTRLGFFI-GRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLYL 106 (1045)
Q Consensus 28 VRDa~yt~~Al~~-l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~L 106 (1045)
.||+...++|+.- ..+.|++.+ +.+...|- ..+...+.|.+.++..+ .+....+ .|..-.++
T Consensus 359 ~RD~~qd~~~~~~~~p~~~r~~i---l~~~~~Q~-----------~dG~~~h~~~p~~~~g~-~~~~~~~--~D~~lW~i 421 (811)
T 3qde_A 359 FRDSNQDLLGFVHQIPERARERL---LDLAATQL-----------EDGSAYHQYQPLTKKGN-NEIGSNF--NDDPLWLI 421 (811)
T ss_dssp HHHHHHHHHTTTTTCHHHHHHHH---HHHHTTBC-----------TTSCBCSEECTTTCCEE-CTTCCCB--TTHHHHHH
T ss_pred cHHHHHHHHHHHhcCHHHHHHHH---HHHHhhcc-----------cCCCccceecCCCCCCC-CCCCCCc--ccchhHHH
Confidence 7999999999874 556666543 44444433 33444444554433332 1111222 79988899
Q ss_pred HHHHHHHHcCCceeeCcch-------------HHHHHHHHHHHHHh-----CCCCCCCCcccCCCCC-----CC------
Q psy12312 107 LILAQMTASGLQIVFCLDE-------------VAFIQNLVFYIESA-----YCIPDYGIWERGDKSN-----HG------ 157 (1045)
Q Consensus 107 laL~qm~~sGl~ii~t~de-------------v~fIqnLV~yie~~-----wr~PD~GIWErr~k~N-----~g------ 157 (1045)
++++.+++..-...+-.+. ++.+..-++|+... .....+|=|..+-..| -|
T Consensus 422 ~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GL~~~g~~DWnD~ln~~~~~~~vg~~~~~v 501 (811)
T 3qde_A 422 LATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGPHGLPLIGRADWNDCLNLNCFSTVPDESFQTT 501 (811)
T ss_dssp HHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBCTTSSBBCBTCSSSTTCCSSCCCCCTTSCTTTS
T ss_pred HHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCCCCCCcccccCCchhhccccccccccCcccccc
Confidence 9999887652222221111 33444444554421 1112233476441100 11
Q ss_pred -----CCcchhhHHHHHHHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCCCC-----C-------CCc--
Q psy12312 158 -----LPELNASSIGMAKAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRE-----S-------SSK-- 217 (1045)
Q Consensus 158 -----~~e~~asSigMa~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpre-----s-------~Sk-- 217 (1045)
..-..+..-++...||.++..+ ..+|.... ...+...++.+.+ .+.+.+...+ . +|+
T Consensus 502 tp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd~~~-A~~~~~~A~~lk~--a~~~~~Wdg~~y~ra~~~dg~~~gs~~~ 578 (811)
T 3qde_A 502 TSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGLEEE-ARKAQQHIDAMKE--AILKYGYDGEWFLRAYDDFGRKVGSKEN 578 (811)
T ss_dssp CCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHHH--HHHHHSBCSSSBCCEECTTSCEESSTTS
T ss_pred ccccCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHH--HHHHhccCcCeEEEEEcCCCCCCCccCC
Confidence 1123355666777799875555 78885321 1122333333332 3333333321 1 111
Q ss_pred ---ccccccc-hhhhcCCCCCCCHH-HHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCC-CCCChhhhhccCCCCcc
Q psy12312 218 ---ELDSGLL-SVISFPAFAVDDPL-LISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNR-LHYDPLELRMFENIESE 291 (1045)
Q Consensus 218 ---evDASLL-~ii~~p~fav~Dp~-~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r-~~Y~~~e~~~feg~E~e 291 (1045)
.+|+.=. +.++.++ -|++ +..+++++|.++|..++|+ |=+.-.|.+...|+.. ..|.|+ -....+.
T Consensus 579 ~~~qi~~~~q~~avlsGi---a~~e~ra~~~m~~v~~~L~t~~Gl-rll~p~f~~~~~d~g~~~~Y~pg----~~enG~i 650 (811)
T 3qde_A 579 EEGKIFIESQGFCVMAEI---GLEDGKALKALDSVKKYLDTPYGL-VLQNPAFTRYYIEYGEISTYPPG----YKENAGI 650 (811)
T ss_dssp SSCCEESHHHHHHHHTTC---SSSSSHHHHHHHHHHHHHCCTTCC-CSEESCCCSCCTTTGGGGTSCTT----STTTTCE
T ss_pred CCceEEecchhHHHHhCC---CCchHHHHHHHHHHHHHhCCCcce-EeecCCccccCCCCCceeccCCC----ccccccc
Confidence 1232111 1233453 2667 8999999999999999998 5554444333334322 345443 2335679
Q ss_pred hhhhHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Q psy12312 292 WPLFFCYLILDFCFQGDEARVKEYGEALDKVMV 324 (1045)
Q Consensus 292 wplf~~~l~i~~i~~G~~e~A~ey~e~L~~~~~ 324 (1045)
|+--..|.+...+..|+.++|.+++..+.....
T Consensus 651 y~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~ 683 (811)
T 3qde_A 651 FCHNNAWIICAETVVGRGDMAFDYYRKIAPAYI 683 (811)
T ss_dssp EHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGS
T ss_pred cchHHHHHHHHHHHcCCHHHHHHHHHHhChhhh
Confidence 999999999999999999999999999998854
No 17
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.68 E-value=0.15 Score=62.48 Aligned_cols=196 Identities=16% Similarity=0.134 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHHcCCceeeCcchHHHHHHHHHHHHHhCCCCCCCCcccCCC------CCCC-CCc--chhhHHHHH
Q psy12312 99 IDAISLYLLILAQMTASGLQIVFCLDEVAFIQNLVFYIESAYCIPDYGIWERGDK------SNHG-LPE--LNASSIGMA 169 (1045)
Q Consensus 99 lDa~gl~LlaL~qm~~sGl~ii~t~dev~fIqnLV~yie~~wr~PD~GIWErr~k------~N~g-~~e--~~asSigMa 169 (1045)
.|....++.+++.+.+......+-.+-|..++..++|+.+.+. +.|+|+.+.+ -|.+ .+. ..+.+-++.
T Consensus 383 ~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d--~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~ 460 (739)
T 3cih_A 383 MDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTN--KNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLF 460 (739)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBC--TTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcC--CCCCcccCCCCcccCCCcccccCCCCcchHHHHHH
Confidence 4777788888888776533333334567888888888877543 3688875421 1111 111 245677899
Q ss_pred HHHHHHHhhh-hhcCCCCCCcchhhchHHHHHHHHHHHHccCCCC---CC----C-cccc-----cccchhhhcCCCCCC
Q psy12312 170 KAALEAMNEL-DLFGARGGPSSVIHVLADEAQKCQAVLQSMLPRE---SS----S-KELD-----SGLLSVISFPAFAVD 235 (1045)
Q Consensus 170 ~AALeai~~~-~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lpre---s~----S-kevD-----ASLL~ii~~p~fav~ 235 (1045)
+.||+.+..+ +.+|.+... ..+...++.+++ .+.+.++..+ +. + ...| |.+++ +.+++++
T Consensus 461 y~al~~~a~lA~~lG~~~~A-~~y~~~A~~lk~--a~~~~~wd~~~G~y~~~~~~G~~~d~~~~~s~~la-L~~Gl~~-- 534 (739)
T 3cih_A 461 CRSLETMALCADLVGDKDGQ-QKYEKLASALKA--KLEPTFWNNQKQAFVHNCVDGRQSDAVTRYANMFS-VFFDYLN-- 534 (739)
T ss_dssp HHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHHH--HHHHHHEETTTTEECSEEETTEECSCCCHHHHHHH-HHTTCSC--
T ss_pred HHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHH--HHHHhccCcccCeeEeecCCCCcCcccchHHhHHH-HHHCCCC--
Confidence 9999976555 788864322 133334444433 3333333322 11 1 1123 44444 4577643
Q ss_pred CHHHHHHHHHHHHHHhccCCceeeccCCCCCCCCCCCCCCCCChhhhhccCCCCcchhhhHHHHHHHHHHcCCHHHHHHH
Q psy12312 236 DPLLISETREAIVSKLRGKYGCKRFLRDGYRTPKEDPNRLHYDPLELRMFENIESEWPLFFCYLILDFCFQGDEARVKEY 315 (1045)
Q Consensus 236 Dp~~~~~T~~~I~~kL~g~yGvkRY~~Dgy~t~~ed~~r~~Y~~~e~~~feg~E~ewplf~~~l~i~~i~~G~~e~A~ey 315 (1045)
++.. ++|.++|..+.++ + ...+|...+|++......|+.++|.++
T Consensus 535 -~e~~----~~v~~~L~~~~~~-------~-----------------------~~~tp~~~~~~~~aL~~~G~~d~A~~l 579 (739)
T 3cih_A 535 -ADKQ----QAIKQSVLLNDEI-------L-----------------------KITTPYMRFYELEALCALGEQETVMKE 579 (739)
T ss_dssp -HHHH----HHHHHHTTTCTTS-------C-----------------------CCCSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred -HHHH----HHHHHHHhcCccc-------c-----------------------cccchhHHHHHHHHHHHcCCHHHHHHH
Confidence 3333 3466666432211 1 012444455556666669999999998
Q ss_pred HHHHHhhhhccCCCceeccccccc
Q psy12312 316 GEALDKVMVQGEEGMKFVPQLYAV 339 (1045)
Q Consensus 316 ~e~L~~~~~~~~~g~~LlPE~Y~V 339 (1045)
+...-.-.+ ..|..-++|.|.+
T Consensus 580 l~~~w~~~v--~~Gattl~E~~~~ 601 (739)
T 3cih_A 580 MKAYWGGML--KAGATSFWEKYNP 601 (739)
T ss_dssp HHHHHHHHH--TTTCSSCCSCCCT
T ss_pred HHHHHHHHH--hCCCceeEEeccc
Confidence 885433333 4566679999864
No 18
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=42.40 E-value=2.2e+02 Score=32.38 Aligned_cols=147 Identities=14% Similarity=0.189 Sum_probs=84.9
Q ss_pred hhhhhccccCCCcccccCCC---------chhHHHHHHHHHh---------cHHHHHHHHHHHHHHHhcchhhHHhhhcc
Q psy12312 8 EALVSVLTDSLINLVPAQTH---------LRTNVDTRLGFFI---------GRYSCVKLMRGLLMAMMQQKHKVEQFKIT 69 (1045)
Q Consensus 8 ~~~il~~Q~p~tGl~pAs~~---------VRDa~yt~~Al~~---------l~~~A~k~mr~LL~~~m~q~~kve~fk~~ 69 (1045)
+.++-.+ +|..|.+.+=+. +=|+.+.+.+|+. +.+.|++..+.++..+.+..
T Consensus 144 ~~L~~r~-~~~~g~iqsw~~~~~~~~~~~iID~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~d--------- 213 (397)
T 2zzr_A 144 DKLMERY-QEKGGFIQAWGELGYKEHYRLIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDD--------- 213 (397)
T ss_dssp HHHHTTE-ETTTTEECCSSSTTCGGGCEEETTHHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTT---------
T ss_pred HHHHHHh-CcCCCEEEecccCCCCCCCceeechHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC---------
Confidence 4455556 888898887331 6799999988872 78889988888887766421
Q ss_pred CCCCccccc-ccccCCCccc-----cC---CcccchhhhhHHHHHHHHHHHHHHcCCceeeCcchHHHHHHHHHHHHHhC
Q psy12312 70 QNPLDALHA-KYHSATGETV-----VG---DTEWGHLQIDAISLYLLILAQMTASGLQIVFCLDEVAFIQNLVFYIESAY 140 (1045)
Q Consensus 70 ~~~~~~lh~-kY~~~tg~pV-----vG---n~aw~hlQlDa~gl~LlaL~qm~~sGl~ii~t~dev~fIqnLV~yie~~w 140 (1045)
....|. .|++.+|.+. -| +..|..= .+-+++++..+++... ..+-.+....+.+|+....
T Consensus 214 ---gs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRG----qAw~i~gl~~lY~~T~----d~~yL~~A~~la~~~l~~~ 282 (397)
T 2zzr_A 214 ---SSAFHTFYFDPETGEPLKGVTRQGYSDESSWARG----QAWGIYGIPLSYRKMK----DYQQIILFKGMTNYFLNRL 282 (397)
T ss_dssp ---SCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHH----HHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHTC
T ss_pred ---CCeEEEEEeeCCCCCcccCCcccccCcchhhHHH----HHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHhh
Confidence 123443 5677777652 11 1224332 3556666666554421 1233566788888888877
Q ss_pred CCCCCC--CcccCCCCCCCCCcchhhHHHHHHHHHHHHhh
Q psy12312 141 CIPDYG--IWERGDKSNHGLPELNASSIGMAKAALEAMNE 178 (1045)
Q Consensus 141 r~PD~G--IWErr~k~N~g~~e~~asSigMa~AALeai~~ 178 (1045)
|+-| .|-......-..++- +|+-+.+-.||-.+..
T Consensus 283 --~~d~~pywdt~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 283 --PEDKVSYWDLIFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp --CTTSCCBSBTTCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred --HHhCCccccCCCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 4433 587653212222222 4544444445544433
No 19
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=41.79 E-value=5.5e+02 Score=31.47 Aligned_cols=164 Identities=10% Similarity=-0.009 Sum_probs=87.2
Q ss_pred HHHHHHHH--hcHHHHHHHHHHHHHHHhcchhhHHhhhccCCCCcccccccccCCCccccCCcccchhhhhHHHHHHHHH
Q psy12312 32 VDTRLGFF--IGRYSCVKLMRGLLMAMMQQKHKVEQFKITQNPLDALHAKYHSATGETVVGDTEWGHLQIDAISLYLLIL 109 (1045)
Q Consensus 32 ~yt~~Al~--~l~~~A~k~mr~LL~~~m~q~~kve~fk~~~~~~~~lh~kY~~~tg~pVvGn~aw~hlQlDa~gl~LlaL 109 (1045)
+|..-.+. .+.+.|+.++++.-+.+-.-.++-+.+ .-.+++.+.=+. +|.++.+.-+.+..|.-+.+-+..++
T Consensus 362 ~~~~P~~~~~~~pe~a~~ll~yr~~~l~~Ar~~A~~~----G~~Ga~~pW~s~-~G~e~~~~w~~~~~q~Hi~a~ia~a~ 436 (754)
T 1h54_A 362 AFAFPVYLGITDPKVTRNLLMYRYKQLDGAYINAQEQ----GLKGALFPMVTF-DGIECHNEWEITFEEIHRNGDIAFAI 436 (754)
T ss_dssp HTHHHHHHHHSCHHHHHHHHHHHHTTHHHHHHHHHTT----TCCSCCCCSSBS-SSSBCCCCHHHHTTCTHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcceeeeECc-CCCcCCCCCccccceecchHHHHHHH
Confidence 44444443 588888887776543322212222221 123344443333 44443111112346777777777888
Q ss_pred HHHHHcCCceeeCcc-hHHHHHHHHHHH-HHhCCCCCCCCcccCC-----CCCCCCCcchhhHHHHHHHHHHHH-hhh--
Q psy12312 110 AQMTASGLQIVFCLD-EVAFIQNLVFYI-ESAYCIPDYGIWERGD-----KSNHGLPELNASSIGMAKAALEAM-NEL-- 179 (1045)
Q Consensus 110 ~qm~~sGl~ii~t~d-ev~fIqnLV~yi-e~~wr~PD~GIWErr~-----k~N~g~~e~~asSigMa~AALeai-~~~-- 179 (1045)
+++.+......|-.+ -++++.....|. .+....|+.|-++..+ .+. ....-++++-.|++-.|+.+ ..+
T Consensus 437 ~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~-e~v~nn~ytn~~a~~~l~~a~~~~~~ 515 (754)
T 1h54_A 437 YNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYE-NNVDNNWDTNMLAQWTLKYTLEILGK 515 (754)
T ss_dssp HHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTS-CSBSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCccccc-CCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 886655334344333 377777776554 4555566777776431 111 11345789999999988743 333
Q ss_pred ------hhcCCCCCCcchhhchHHHHHHHHHHHHccCC
Q psy12312 180 ------DLFGARGGPSSVIHVLADEAQKCQAVLQSMLP 211 (1045)
Q Consensus 180 ------~lfG~~g~~~svi~v~~D~i~r~~~il~~~Lp 211 (1045)
+.+| +..++..+-+++.+.|.+
T Consensus 516 l~~~~~~~lg----------~~~~~~~~w~~i~~~l~~ 543 (754)
T 1h54_A 516 VDQDTAKQLD----------VSDEEKTKWQDIVDRMYL 543 (754)
T ss_dssp SCHHHHHHHC----------CCHHHHHHHHHHHHTBCC
T ss_pred HHHHHHHHhC----------CCHHHHHHHHHHHhCCCC
Confidence 2333 233455555677777754
No 20
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=27.56 E-value=4e+02 Score=29.31 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHH-cCCH--HHHHHHHHHHHhhhhccCCCceecccccccCcccccccccCCCcceecccCCCCccchhHH
Q psy12312 294 LFFCYLILDFCF-QGDE--ARVKEYGEALDKVMVQGEEGMKFVPQLYAVPPEHVDEEYKNPGCVERIALGRCPLLWAQSL 370 (1045)
Q Consensus 294 lf~~~l~i~~i~-~G~~--e~A~ey~e~L~~~~~~~~~g~~LlPE~Y~V~~~~v~~e~~~p~s~~r~p~gn~PllWsqsl 370 (1045)
.|++||++..+. .|+. ...++..+.+..+-..+..| |.+ .| |+.| ---|..
T Consensus 239 ~cys~w~l~~L~llg~~~~~~~~~~~~fil~cQ~~~~GG---f~~---------------------~p-g~~~-d~~hT~ 292 (331)
T 3dss_B 239 VCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGG---FAD---------------------RP-GDMV-DPFHTL 292 (331)
T ss_dssp HHHHHHHHHHHHHTTCGGGSCHHHHHHHHHHTBCTTTCC---BCS---------------------ST-TSCC-BHHHHH
T ss_pred chhHHHHHHHHHHcCCcchhhHHHHHHHHHHhcCCCCCC---cCC---------------------CC-CCCC-CHHHHH
Confidence 577788888776 6654 23455666666652111134 222 11 2333 346888
Q ss_pred HHHHHHHhccCCCCCCCCCC
Q psy12312 371 YILGRLLQHGFLATGELDPL 390 (1045)
Q Consensus 371 yi~~~ll~~~~l~~~diDPl 390 (1045)
|-++.|-.-|.=...++||.
T Consensus 293 ~~l~~Ls~~g~~~l~~~~p~ 312 (331)
T 3dss_B 293 FGIAGLSLLGEEQIKPVSPV 312 (331)
T ss_dssp HHHHHHHHTTCTTSCCBCTT
T ss_pred HHHHHHHHcCCCCCCCCCcc
Confidence 88888876664344455554
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=26.40 E-value=98 Score=34.44 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=51.6
Q ss_pred hhhhhhhccccCCCcccc----cC---CCchhHHHHHHHHHh-------------cHHHHHHHHHHHHHHHh-cchhhHH
Q psy12312 6 DKEALVSVLTDSLINLVP----AQ---THLRTNVDTRLGFFI-------------GRYSCVKLMRGLLMAMM-QQKHKVE 64 (1045)
Q Consensus 6 ~~~~~il~~Q~p~tGl~p----As---~~VRDa~yt~~Al~~-------------l~~~A~k~mr~LL~~~m-~q~~kve 64 (1045)
.+-+-++++|+|.+|+.- .. ...||++=+++...+ |...|.|.+++|...+. ...
T Consensus 245 ~~a~~l~~~q~~~dG~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~~~~~~~~~---- 320 (373)
T 1nc5_A 245 DMIKSICRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSE---- 320 (373)
T ss_dssp HHHHHHHTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECT----
T ss_pred HHHHHHHHhcCCCCCceeeecCCCCCCCCCccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHhceeECC----
Confidence 344568899998788733 11 126886655554443 55667776666655332 111
Q ss_pred hhhccCCCCccccc----------ccccCCCccccCCcccchhhhhHHHHHHHHHHHHHH
Q psy12312 65 QFKITQNPLDALHA----------KYHSATGETVVGDTEWGHLQIDAISLYLLILAQMTA 114 (1045)
Q Consensus 65 ~fk~~~~~~~~lh~----------kY~~~tg~pVvGn~aw~hlQlDa~gl~LlaL~qm~~ 114 (1045)
.+.++- -|.-+.+.|++.|+++|+ |.||+++.+|.+
T Consensus 321 --------dG~l~~~~~~~~~~~~~~~yY~~~~~~~~d~~G~------g~~lla~~e~~~ 366 (373)
T 1nc5_A 321 --------DGAFLVKDICVGTSAGFYDYYVSRERSTNDLHGA------GAFILAMTELEP 366 (373)
T ss_dssp --------TSCEEECCEECSCCSCCHHHHHTSCEESSCHHHH------HHHHHHHHHHHH
T ss_pred --------CCCEEecceEEeCcCCCchhhhcccCCCCCcchH------HHHHHHHHHHHH
Confidence 112211 112222356666666654 899999988764
Done!