BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12313
(488 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307611933|ref|NP_001182633.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
gi|306448443|gb|ADM88004.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
Length = 594
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/310 (78%), Positives = 277/310 (89%)
Query: 160 KEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDY 219
+ K+ + + KNIT VL NLLKNY++S+ P HGKG PT+++TN+LIRSMGP+SE+D+DY
Sbjct: 126 QNKRSINDAVSKNITSVLENLLKNYENSQLPTHGKGYPTVVQTNILIRSMGPVSELDVDY 185
Query: 220 SMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLR 279
SMDCYFRQYWRD+RLSF+GPI +LSLSIKMLE+IWRPDTY NGK SY HTITVPNKLLR
Sbjct: 186 SMDCYFRQYWRDTRLSFLGPIRSLSLSIKMLERIWRPDTYFYNGKHSYAHTITVPNKLLR 245
Query: 280 INQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV 339
I+Q GDILYSMRLTIKA CPM LRNFPMD QSCPLILGSYAY ++LVY W +S++FV
Sbjct: 246 ISQHGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYSNQQLVYQWQNSQSVNFV 305
Query: 340 PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
PGM +SQFD IS P RNFTF RREG+FS+LQV+FNLKRH GYF+IQVYVPC+LIVVLSWV
Sbjct: 306 PGMTLSQFDLISFPYRNFTFTRREGDFSVLQVSFNLKRHTGYFLIQVYVPCILIVVLSWV 365
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT+LE
Sbjct: 366 SFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLE 425
Query: 460 FAAVHYFTKL 469
FA VHYFTK+
Sbjct: 426 FAGVHYFTKV 435
>gi|383863328|ref|XP_003707133.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 535
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/316 (78%), Positives = 278/316 (87%)
Query: 154 KVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K S + + + ++ KNIT+VL NLL NY++++ P HGKG PT++KTN+LIRSMGP+S
Sbjct: 44 KTSKAMATRGAVNDVVSKNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVS 103
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITV 273
E+DMDYSMDCYFRQ WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITV
Sbjct: 104 ELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITV 163
Query: 274 PNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG 333
PNKLLRI+QDGDILYSMRLTIKA CPM LRNFPMD QSCPLILGSYAY +LVY W G
Sbjct: 164 PNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLVYEWQEG 223
Query: 334 KSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S++FVPGMA+SQFD + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLI
Sbjct: 224 SSVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLI 283
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
VVLSWVSFWIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YC
Sbjct: 284 VVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYC 343
Query: 454 IATILEFAAVHYFTKL 469
IAT+LEFA VHYFTK+
Sbjct: 344 IATLLEFAGVHYFTKV 359
>gi|307200308|gb|EFN80573.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Harpegnathos
saltator]
Length = 468
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/302 (80%), Positives = 273/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLL NY++S+ P HGKG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 98 IVSRNITMVLENLLMNYENSQLPTHGKGVPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 157
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 158 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 217
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA CPM LRNFPMD QSCPLI+GSYAY +LVY W G S++FVPGMA+SQF
Sbjct: 218 YSMRLTIKAKCPMELRNFPMDRQSCPLIMGSYAYTSGQLVYEWQEGSSVNFVPGMALSQF 277
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIVVLSWVSFWIHREA
Sbjct: 278 DLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREA 337
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCIAT+LEFA VHYFT
Sbjct: 338 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFAGVHYFT 397
Query: 468 KL 469
K+
Sbjct: 398 KV 399
>gi|270006459|gb|EFA02907.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 538
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/302 (80%), Positives = 273/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLLKNY+SS+ P HGK +PTI++TN+LIRSMGP+SE+DM+YSMDCYFRQ
Sbjct: 66 VVSRNITMVLENLLKNYESSQLPTHGKDQPTIVQTNILIRSMGPVSELDMEYSMDCYFRQ 125
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 126 YWRDQRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 185
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA CPM LR FPMD QSCPLILGSYAY + L+Y W S++FVPGM +SQF
Sbjct: 186 YSMRLTIKAKCPMELRTFPMDRQSCPLILGSYAYTSKDLLYRWQNEASVNFVPGMTLSQF 245
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D IS P RNFT KRREG+FS+LQV+FNL+RH GYF+IQVYVPC+LIVVLSWVSFWIHREA
Sbjct: 246 DLISFPYRNFTLKRREGDFSVLQVSFNLQRHTGYFLIQVYVPCILIVVLSWVSFWIHREA 305
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT+LEFA VHYFT
Sbjct: 306 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFT 365
Query: 468 KL 469
K+
Sbjct: 366 KV 367
>gi|158262729|ref|NP_001103425.1| cys-loop ligand-gated ion channel subunit precursor [Tribolium
castaneum]
gi|156447625|gb|ABU63605.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 549
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/302 (80%), Positives = 273/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLLKNY+SS+ P HGK +PTI++TN+LIRSMGP+SE+DM+YSMDCYFRQ
Sbjct: 66 VVSRNITMVLENLLKNYESSQLPTHGKDQPTIVQTNILIRSMGPVSELDMEYSMDCYFRQ 125
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 126 YWRDQRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 185
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA CPM LR FPMD QSCPLILGSYAY + L+Y W S++FVPGM +SQF
Sbjct: 186 YSMRLTIKAKCPMELRTFPMDRQSCPLILGSYAYTSKDLLYRWQNEASVNFVPGMTLSQF 245
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D IS P RNFT KRREG+FS+LQV+FNL+RH GYF+IQVYVPC+LIVVLSWVSFWIHREA
Sbjct: 246 DLISFPYRNFTLKRREGDFSVLQVSFNLQRHTGYFLIQVYVPCILIVVLSWVSFWIHREA 305
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT+LEFA VHYFT
Sbjct: 306 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFT 365
Query: 468 KL 469
K+
Sbjct: 366 KV 367
>gi|350423054|ref|XP_003493370.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 535
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/302 (80%), Positives = 273/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ KNIT+VL NLL NY++++ P HGKG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 57 IVSKNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 116
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 117 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 176
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA CPM LRNFPMD QSCPLILGSYAY +L+Y W G S++FVPGMA+SQF
Sbjct: 177 YSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLIYEWQEGSSVNFVPGMALSQF 236
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + SP RN TF RREGEFS+LQV+FNL+R+ GYF+IQVYVPCVLIVVLSWVSFWIHREA
Sbjct: 237 DLMGSPYRNLTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREA 296
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCIAT+LEFA VHYFT
Sbjct: 297 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFAGVHYFT 356
Query: 468 KL 469
K+
Sbjct: 357 KV 358
>gi|332026034|gb|EGI66185.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Acromyrmex
echinatior]
Length = 429
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/315 (77%), Positives = 277/315 (87%), Gaps = 1/315 (0%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N + +D+ + KNIT+VL NLL NY++S+ P HGKG PT++KTN+LIRSMGP+SE
Sbjct: 32 IGNRMPRATLNDV-VSKNITMVLENLLMNYENSQLPTHGKGVPTVVKTNILIRSMGPVSE 90
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
+DMDYSMDCYFRQ WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVP
Sbjct: 91 LDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVP 150
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKLLRI+QDGDILYSMRLTIKA CPM LRNFPMD Q CPLI+GSYAY +LVY W G
Sbjct: 151 NKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQFCPLIMGSYAYTSGQLVYEWQEGL 210
Query: 335 SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
S++F+PGMA+SQFD + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIV
Sbjct: 211 SVNFIPGMALSQFDLMGSPYRNLTFFRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIV 270
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
VLSWVSFWIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCI
Sbjct: 271 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCI 330
Query: 455 ATILEFAAVHYFTKL 469
AT+LEFA VHYFTK+
Sbjct: 331 ATLLEFAGVHYFTKI 345
>gi|340727211|ref|XP_003401942.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 520
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/302 (80%), Positives = 273/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ KNIT+VL NLL NY++++ P HGKG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 43 IVSKNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 102
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 103 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 162
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA CPM LRNFPMD QSCPLILGSYAY +L+Y W G S++FVPGMA+SQF
Sbjct: 163 YSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLIYEWQEGSSVNFVPGMALSQF 222
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + SP RN TF RREGEFS+LQV+FNL+R+ GYF+IQVYVPCVLIVVLSWVSFWIHREA
Sbjct: 223 DLMGSPYRNLTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREA 282
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCIAT+LEFA VHYFT
Sbjct: 283 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFAGVHYFT 342
Query: 468 KL 469
K+
Sbjct: 343 KV 344
>gi|345487406|ref|XP_001600806.2| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Nasonia
vitripennis]
Length = 570
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/308 (78%), Positives = 270/308 (87%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLL NY++S+ P HGKG PT++KTN+ IRSMGPISE+DMDYSMDCYFRQ
Sbjct: 59 IVSRNITMVLENLLMNYENSQLPTHGKGTPTVVKTNIYIRSMGPISELDMDYSMDCYFRQ 118
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI Q+GDIL
Sbjct: 119 YWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRITQEGDIL 178
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA C M LRNFPMD QSCPLILGSYAY +LVY W S++FVPGMA+SQF
Sbjct: 179 YSMRLTIKAKCTMDLRNFPMDRQSCPLILGSYAYTSGQLVYEWQDNSSVNFVPGMALSQF 238
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + P RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIVVLSWVSFWIHREA
Sbjct: 239 DLMGYPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREA 298
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSR DLPKV+YATALDWFLLMSF YCIAT+LEFA VHYFT
Sbjct: 299 TSDRVGLGITTVLTLSTISLDSRKDLPKVKYATALDWFLLMSFGYCIATLLEFAGVHYFT 358
Query: 468 KLCYPGYP 475
K+ +P
Sbjct: 359 KVGSGEFP 366
>gi|269856285|gb|ACZ51425.1| cys-loop ligand-gated ion channel subunit, partial [Nasonia
vitripennis]
Length = 561
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/308 (78%), Positives = 270/308 (87%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLL NY++S+ P HGKG PT++KTN+ IRSMGPISE+DMDYSMDCYFRQ
Sbjct: 50 IVSRNITMVLENLLMNYENSQLPTHGKGTPTVVKTNIYIRSMGPISELDMDYSMDCYFRQ 109
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI Q+GDIL
Sbjct: 110 YWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRITQEGDIL 169
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA C M LRNFPMD QSCPLILGSYAY +LVY W S++FVPGMA+SQF
Sbjct: 170 YSMRLTIKAKCTMDLRNFPMDRQSCPLILGSYAYTSGQLVYEWQDNSSVNFVPGMALSQF 229
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + P RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIVVLSWVSFWIHREA
Sbjct: 230 DLMGYPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREA 289
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSR DLPKV+YATALDWFLLMSF YCIAT+LEFA VHYFT
Sbjct: 290 TSDRVGLGITTVLTLSTISLDSRKDLPKVKYATALDWFLLMSFGYCIATLLEFAGVHYFT 349
Query: 468 KLCYPGYP 475
K+ +P
Sbjct: 350 KVGSGEFP 357
>gi|307189539|gb|EFN73916.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Camponotus
floridanus]
Length = 505
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 272/308 (88%), Gaps = 6/308 (1%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ KNIT+VL NLL NY++S+ P H KG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 16 IVSKNITMVLENLLMNYENSQLPTHDKGMPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 75
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 76 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 135
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK------SISFVPG 341
YSMRLTIKA CPM LRNFPMD Q CPLI+GSYAY +LVY W G+ S++FVPG
Sbjct: 136 YSMRLTIKAKCPMELRNFPMDRQFCPLIMGSYAYTSGQLVYEWQEGQEGKEGSSVNFVPG 195
Query: 342 MAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSF 401
MA+SQFD + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIVVLSWVSF
Sbjct: 196 MALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSF 255
Query: 402 WIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFA 461
WIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCIAT+LEFA
Sbjct: 256 WIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFA 315
Query: 462 AVHYFTKL 469
VHYFTK+
Sbjct: 316 GVHYFTKI 323
>gi|170048762|ref|XP_001870768.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870754|gb|EDS34137.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 515
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 233/313 (74%), Positives = 277/313 (88%)
Query: 159 LKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMD 218
+K++ D M+ KNIT +L NLLK+Y++S+ P HG+G PT++KTN+LIRSMGP+SE+DMD
Sbjct: 195 VKKRSAADDMLSKNITQILENLLKSYENSQMPTHGQGIPTVVKTNILIRSMGPVSELDMD 254
Query: 219 YSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLL 278
YSMDCYFRQYWRD RLSF GPI +LSLSIKMLE+IWRPDTY NGK S+VHTITVPNKLL
Sbjct: 255 YSMDCYFRQYWRDKRLSFHGPIKSLSLSIKMLERIWRPDTYFYNGKHSHVHTITVPNKLL 314
Query: 279 RINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF 338
R++QDG+ILYSMRLTIKA C M L++FPMD QSCPL+LGSYAY ++L+Y W S++F
Sbjct: 315 RLSQDGEILYSMRLTIKAGCLMQLQSFPMDRQSCPLVLGSYAYSRQQLIYQWQTDDSVNF 374
Query: 339 VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSW 398
VPG+++SQFD IS ++N+TF RREGEFS+L V+FNL+RH GYF+IQVYVPC+LIVVLSW
Sbjct: 375 VPGLSLSQFDLISFHQKNYTFARREGEFSVLHVSFNLQRHTGYFLIQVYVPCILIVVLSW 434
Query: 399 VSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATIL 458
VSFWIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLM+F YCIAT+L
Sbjct: 435 VSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMNFIYCIATLL 494
Query: 459 EFAAVHYFTKLCY 471
EFA VHYFTK+ Y
Sbjct: 495 EFAGVHYFTKVRY 507
>gi|347963040|ref|XP_001237369.2| AGAP000039-PA [Anopheles gambiae str. PEST]
gi|333467388|gb|EAU77351.2| AGAP000039-PA [Anopheles gambiae str. PEST]
Length = 464
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 233/302 (77%), Positives = 272/302 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ KNIT++L NLLK Y++S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSKNITIILENLLKRYENSQMPTHGQGVPTLVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKMLE+IWRPDTY NGK S+VHTITVPNKLLR++QDG+IL
Sbjct: 61 YWRDKRLSFRGPIKSLSLSIKMLERIWRPDTYFYNGKHSHVHTITVPNKLLRLSQDGEIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
YSMRLTIKA+C M LR+FPMD QSCPL+LGSYAY ++LVY W S++FVPGM +SQF
Sbjct: 121 YSMRLTIKASCLMELRSFPMDRQSCPLVLGSYAYSRQQLVYQWKDEDSVNFVPGMTLSQF 180
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D +S ++N+TF RREGEFS+L V+FNL+RH GYF+IQVYVPC+LIVVLSWVSFWIHREA
Sbjct: 181 DLMSFGQKNYTFIRREGEFSVLHVSFNLQRHTGYFLIQVYVPCILIVVLSWVSFWIHREA 240
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
TSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT+LEFA VHYFT
Sbjct: 241 TSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFT 300
Query: 468 KL 469
K+
Sbjct: 301 KV 302
>gi|322782659|gb|EFZ10522.1| hypothetical protein SINV_01657 [Solenopsis invicta]
Length = 569
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/324 (75%), Positives = 271/324 (83%), Gaps = 19/324 (5%)
Query: 169 IGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
+ KNITLVL NLL NY++S+ P HGKG PT++KTN+LI+SMGP+SE+DMDYSMDCYFRQ
Sbjct: 68 VSKNITLVLENLLMNYENSQLPTHGKGIPTVVKTNILIKSMGPVSELDMDYSMDCYFRQS 127
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDILY
Sbjct: 128 WRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILY 187
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSY-------------------AYPIEKLVYH 329
SMRLTIKA CPM LRNFPMD Q CPLI+GS AY +LVY
Sbjct: 188 SMRLTIKAKCPMELRNFPMDRQFCPLIMGSCMYRLFLSDYIVISQLGKMNAYTSGQLVYE 247
Query: 330 WTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVP 389
W G S++F+PGMA+SQFD + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVP
Sbjct: 248 WQEGLSVNFMPGMALSQFDLMGSPYRNLTFFRREGEFSVLQVSFNLQRHTGYFLIQVYVP 307
Query: 390 CVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 449
CVLIVVLSWVSFWIHREATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS
Sbjct: 308 CVLIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 367
Query: 450 FFYCIATILEFAAVHYFTKLCYPG 473
F YCIAT+LEFA VHYFTK+ G
Sbjct: 368 FGYCIATLLEFAGVHYFTKVIDSG 391
>gi|118150504|ref|NP_001071290.1| cys-loop ligand-gated ion channel subunit 8916 [Apis mellifera]
gi|110555530|gb|ABG75745.1| cys-loop ligand-gated ion channel subunit [Apis mellifera]
Length = 510
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/303 (77%), Positives = 265/303 (87%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLL NY++++ P HGKG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 32 IVSRNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 91
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 92 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 151
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV-PGMAISQ 346
YSMRLTIKA CPM LRNFPMD QSCPLILGS + + G+ ++ PGMA+SQ
Sbjct: 152 YSMRLTIKAKCPMELRNFPMDRQSCPLILGSCKCIYVQSINLCMAGRLFGYLCPGMALSQ 211
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD + SP RN TF RREGEFS+LQV+FNL+RH GYF+IQVYVPCVLIVVLSWVSFWIHRE
Sbjct: 212 FDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHRE 271
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 272 ATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLLEFAGVHYF 331
Query: 467 TKL 469
TK+
Sbjct: 332 TKV 334
>gi|195392958|ref|XP_002055121.1| GJ18972 [Drosophila virilis]
gi|194149631|gb|EDW65322.1| GJ18972 [Drosophila virilis]
Length = 534
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/309 (73%), Positives = 264/309 (85%), Gaps = 1/309 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+ +L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 62 MLSRNISSILENLLKRYEQSQLPTHGQGLPTVVRTNILIRSMGPVSELDMDYSMDCYFRQ 121
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++HTITVPNKLLR++QDG IL
Sbjct: 122 YWRDKRLSFQGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGIL 181
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT-PGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPLI+GSY Y ++LVY W ++SFVPGM ++Q
Sbjct: 182 YSMRLTIKATCPMELKNFPMDRQSCPLIIGSYGYTNQQLVYEWQNHDDAVSFVPGMTLNQ 241
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 242 FDLISMMHRNFTSTRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 301
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 302 ATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 361
Query: 467 TKLCYPGYP 475
TKL +P
Sbjct: 362 TKLGSGEFP 370
>gi|195044262|ref|XP_001991786.1| GH12851 [Drosophila grimshawi]
gi|193901544|gb|EDW00411.1| GH12851 [Drosophila grimshawi]
Length = 552
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/316 (73%), Positives = 267/316 (84%), Gaps = 6/316 (1%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+ +L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 58 MLSRNISSILENLLKRYEQSQLPTHGQGMPTVVRTNILIRSMGPVSELDMDYSMDCYFRQ 117
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++HTITVPNKLLR++QDG IL
Sbjct: 118 YWRDKRLSFQGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGIL 177
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPLI+GSY Y ++LVY W ++SFVPGM ++Q
Sbjct: 178 YSMRLTIKATCPMELKNFPMDRQSCPLIIGSYGYTNQQLVYEWQNHDDAVSFVPGMTLNQ 237
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 238 FDLISMMHRNFTSTRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 297
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 298 ATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 357
Query: 467 TKLCYPGYPSGFIERL 482
TKL SG I R+
Sbjct: 358 TKLG-----SGEIPRM 368
>gi|195457044|ref|XP_002075401.1| GK17720 [Drosophila willistoni]
gi|194171486|gb|EDW86387.1| GK17720 [Drosophila willistoni]
Length = 562
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 226/303 (74%), Positives = 264/303 (87%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK+Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 57 MLSRNISILLENLLKHYEQSQLPTHGQGLPTVVRTNILIRSMGPVSELDMDYSMDCYFRQ 116
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++HTITVPNKLLR++QDG IL
Sbjct: 117 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGIL 176
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++LVY W ++SFVPGM ++Q
Sbjct: 177 YSMRLTIKATCPMELKNFPMDRQSCPLVIGSYGYTNQQLVYEWKNQDDAVSFVPGMTLNQ 236
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 237 FDLISMMHRNFTSTRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 296
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 297 ATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 356
Query: 467 TKL 469
TKL
Sbjct: 357 TKL 359
>gi|195131085|ref|XP_002009981.1| GI14943 [Drosophila mojavensis]
gi|193908431|gb|EDW07298.1| GI14943 [Drosophila mojavensis]
Length = 592
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/316 (73%), Positives = 267/316 (84%), Gaps = 6/316 (1%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+ +L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 97 MLSRNISSILENLLKRYEQSQLPTHGQGLPTVVRTNILIRSMGPVSELDMDYSMDCYFRQ 156
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++HTITVPNKLLR++QDG IL
Sbjct: 157 YWRDKRLSFQGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGIL 216
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT-PGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPLI+GSY Y ++LVY W ++SFVPGM ++Q
Sbjct: 217 YSMRLTIKATCPMELKNFPMDRQSCPLIIGSYGYTNQQLVYEWQNHDDAVSFVPGMTLNQ 276
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 277 FDLISMMHRNFTSTRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 336
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 337 ATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 396
Query: 467 TKLCYPGYPSGFIERL 482
TKL SG I R+
Sbjct: 397 TKLG-----SGEIPRI 407
>gi|198460841|ref|XP_002135928.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
gi|198139747|gb|EDY70824.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
Length = 502
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/316 (73%), Positives = 265/316 (83%), Gaps = 6/316 (1%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NI+ +L NLLK Y+ S+ P HGKG PT+++TN+LIRSMGP+SE DM+YSMDCYFRQ
Sbjct: 9 ILSRNISNILENLLKRYEQSQLPTHGKGIPTVVQTNILIRSMGPVSERDMEYSMDCYFRQ 68
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++HTITVPNKLLR+ QDG IL
Sbjct: 69 YWRDKRLSFEGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLGQDGGIL 128
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT-PGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPLI GSY Y ++LVY W ++SFVPGM ++Q
Sbjct: 129 YSMRLTIKATCPMELKNFPMDRQSCPLIFGSYGYTNQQLVYEWKDQDDAVSFVPGMTLNQ 188
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+LQV FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 189 FDLISMMHRNFTSTRREGDFSVLQVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 248
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 249 ATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 308
Query: 467 TKLCYPGYPSGFIERL 482
TKL SG I RL
Sbjct: 309 TKL-----GSGEIPRL 319
>gi|281360961|ref|NP_573090.3| CG8916, isoform B [Drosophila melanogaster]
gi|66772011|gb|AAY55317.1| IP12579p [Drosophila melanogaster]
gi|272506126|gb|AAF48539.4| CG8916, isoform B [Drosophila melanogaster]
Length = 612
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/352 (66%), Positives = 284/352 (80%), Gaps = 5/352 (1%)
Query: 120 STFNVLSMFSVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKKKHDL-MIGKNITLVLN 178
S+F +L K NG +K + T +++ ++SN + ++K M+ +NI+++L
Sbjct: 57 SSFRILPSSKPK-TNGSLKRSQNATNLSYSSS--EISNQRRVRRKAAADMLSRNISMILE 113
Query: 179 NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG 238
NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQYWRD RLSF G
Sbjct: 114 NLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKG 173
Query: 239 PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANC 298
PI +LSLSIKML+KIWRPDTY NGK S +H ITVPNKLLR++Q+G ILYSMRLTIKA C
Sbjct: 174 PIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATC 233
Query: 299 PMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNF 357
PM L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++QFD IS RNF
Sbjct: 234 PMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNF 293
Query: 358 TFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGIT 417
T RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHREATSDR+ L +T
Sbjct: 294 TTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVT 353
Query: 418 TVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYFTKL
Sbjct: 354 SVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKL 405
>gi|195479054|ref|XP_002100748.1| GE17237 [Drosophila yakuba]
gi|194188272|gb|EDX01856.1| GE17237 [Drosophila yakuba]
Length = 512
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 222/303 (73%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S +H ITVPNKLLR++Q+G IL
Sbjct: 61 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++Q
Sbjct: 121 YSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQ 180
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 181 FDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 240
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 241 ATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
Query: 467 TKL 469
TKL
Sbjct: 301 TKL 303
>gi|281360963|ref|NP_001162770.1| CG8916, isoform C [Drosophila melanogaster]
gi|272506127|gb|ACZ95305.1| CG8916, isoform C [Drosophila melanogaster]
Length = 510
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/303 (73%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S +H ITVPNKLLR++Q+G IL
Sbjct: 61 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++Q
Sbjct: 121 YSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQ 180
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 181 FDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 240
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 241 ATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
Query: 467 TKL 469
TKL
Sbjct: 301 TKL 303
>gi|194894096|ref|XP_001978007.1| GG17930 [Drosophila erecta]
gi|190649656|gb|EDV46934.1| GG17930 [Drosophila erecta]
Length = 512
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/303 (73%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSRNISMLLENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S +H ITVPNKLLR++Q+G IL
Sbjct: 61 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++Q
Sbjct: 121 YSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQ 180
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 181 FDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 240
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 241 ATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
Query: 467 TKL 469
TKL
Sbjct: 301 TKL 303
>gi|195555117|ref|XP_002077030.1| GD24823 [Drosophila simulans]
gi|194203048|gb|EDX16624.1| GD24823 [Drosophila simulans]
Length = 512
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/303 (73%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S +H ITVPNKLLR++Q+G IL
Sbjct: 61 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++Q
Sbjct: 121 YSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQ 180
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 181 FDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 240
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 241 ATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
Query: 467 TKL 469
TKL
Sbjct: 301 TKL 303
>gi|195355479|ref|XP_002044219.1| GM22598 [Drosophila sechellia]
gi|194129508|gb|EDW51551.1| GM22598 [Drosophila sechellia]
Length = 510
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/303 (72%), Positives = 259/303 (85%), Gaps = 1/303 (0%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
M+ +NI+++L NLLK Y+ S+ P HG+G PT+++TN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 1 MLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQ 60
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
YWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S +H ITVPNK LR++Q+G IL
Sbjct: 61 YWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKWLRLDQNGGIL 120
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQ 346
YSMRLTIKA CP L+NFPMD QSCPL++GSY Y ++L+Y W ++SFVPGM ++Q
Sbjct: 121 YSMRLTIKATCPRELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQ 180
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FD IS RNFT RREG+FS+L V FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHRE
Sbjct: 181 FDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHRE 240
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
ATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFLLMSF YCIAT+LEFA VHYF
Sbjct: 241 ATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
Query: 467 TKL 469
TKL
Sbjct: 301 TKL 303
>gi|195175701|ref|XP_002028564.1| GL25394 [Drosophila persimilis]
gi|194104908|gb|EDW26951.1| GL25394 [Drosophila persimilis]
Length = 453
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/275 (76%), Positives = 232/275 (84%), Gaps = 6/275 (2%)
Query: 209 MGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYV 268
MGP+SE DM+YSMDCYFRQYWRD RLSF GPI +LSLSIKML+KIWRPDTY NGK S++
Sbjct: 1 MGPVSERDMEYSMDCYFRQYWRDKRLSFEGPIKSLSLSIKMLDKIWRPDTYFYNGKHSHI 60
Query: 269 HTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVY 328
HTITVPNKLLR+ QDG ILYSMRLTIKA CPM L+NFPMD QSCPLI GSY Y ++LVY
Sbjct: 61 HTITVPNKLLRLGQDGGILYSMRLTIKATCPMELKNFPMDRQSCPLIFGSYGYTNQQLVY 120
Query: 329 HWT-PGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
W ++SFVPGM ++QFD IS RNFT RREG+FS+LQV FNLKRH GYF+IQVY
Sbjct: 121 EWKDQDDAVSFVPGMTLNQFDLISMMHRNFTSTRREGDFSVLQVAFNLKRHTGYFLIQVY 180
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
VPC+LIVVLSWVSFWIHREATSDR+GL +T VLTLSTISLDSRTDLPKV+YATALDWFLL
Sbjct: 181 VPCILIVVLSWVSFWIHREATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLL 240
Query: 448 MSFFYCIATILEFAAVHYFTKLCYPGYPSGFIERL 482
MSF YCIAT+LEFA VHYFTKL SG I RL
Sbjct: 241 MSFLYCIATLLEFAGVHYFTKL-----GSGEIPRL 270
>gi|321478660|gb|EFX89617.1| hypothetical protein DAPPUDRAFT_190742 [Daphnia pulex]
Length = 432
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 252/303 (83%)
Query: 169 IGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
+ +NIT +L NLLKNY S+ P + G PTI+K+N+L+RSMGP SE MDYSMDCYFRQ
Sbjct: 75 LSRNITSLLENLLKNYDSNHHPGYDSGLPTIVKSNILVRSMGPFSEHRMDYSMDCYFRQS 134
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W+D RLSF GPI LSLSIKMLE IW+PDT+I NGK+SY+HTIT PNKLLRIN+DG ILY
Sbjct: 135 WQDRRLSFNGPIETLSLSIKMLEGIWKPDTFIYNGKKSYLHTITTPNKLLRINKDGSILY 194
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
S+RLTIKA C M LR FPMD QSCPLILGSY+Y E L+Y W + + F+ + +SQFD
Sbjct: 195 SVRLTIKAKCSMDLREFPMDHQSCPLILGSYSYDEEDLLYVWDEDQGVKFLGDVELSQFD 254
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
ISSP RN + R+ G +S+LQV+FNL+R +GYF+IQVYVPC+LIVVLSWVSFW++REAT
Sbjct: 255 LISSPYRNASISRKRGLYSVLQVSFNLRRKQGYFLIQVYVPCILIVVLSWVSFWLNREAT 314
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
SDRI LGITTVLTLST+++D+RTDLPKV YATALDWF+L++F YC+A+I++FA+VHYFTK
Sbjct: 315 SDRINLGITTVLTLSTLAMDTRTDLPKVHYATALDWFILITFGYCMASIIQFASVHYFTK 374
Query: 469 LCY 471
+ +
Sbjct: 375 VIF 377
>gi|391345576|ref|XP_003747061.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 528
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/315 (61%), Positives = 243/315 (77%), Gaps = 6/315 (1%)
Query: 164 KHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDC 223
+ + + +NI+++L LL+NY ++ P G PT + +MLIRSMGP+SE+DM+YSMDC
Sbjct: 50 RAQMALSRNISILLEQLLRNYDDNQRPYQGV-RPTRVVASMLIRSMGPVSELDMEYSMDC 108
Query: 224 YFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQD 283
YFRQ W D RL F GPI+ +SL IK LE+IW+PDTY NG+ SY+HTIT PNKLLR++ D
Sbjct: 109 YFRQAWNDHRLKFKGPISPISLHIKTLERIWKPDTYFHNGRGSYLHTITQPNKLLRLSND 168
Query: 284 GDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGM 342
G +LYSMRLTIKA CPM L+NFPMD QSCPL+ GSYAY E++VY W K++ V G+
Sbjct: 169 GAVLYSMRLTIKAKCPMELQNFPMDRQSCPLVFGSYAYTQEEMVYSWKAAPKAVGLVEGL 228
Query: 343 AISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFW 402
+SQFD I++P N T R G +S+L+VNFNL RH GYF+IQVYVPC L+VVLSWVSFW
Sbjct: 229 QLSQFDLINNPYVNETLIIRNGTYSVLRVNFNLHRHMGYFLIQVYVPCGLLVVLSWVSFW 288
Query: 403 IHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAA 462
I+REAT+DR+GLG+TTVLTLST LD+RTDLPKV Y TALDWF++M F Y I ++LEFA
Sbjct: 289 INREATADRVGLGMTTVLTLSTFGLDTRTDLPKVPYPTALDWFVIMCFTYVICSLLEFAG 348
Query: 463 VHYFTKLC----YPG 473
VHYFTK+ +PG
Sbjct: 349 VHYFTKVGSGEYFPG 363
>gi|391347034|ref|XP_003747770.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 575
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/316 (59%), Positives = 239/316 (75%), Gaps = 15/316 (4%)
Query: 169 IGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
+ +N++L+L +LL Y P + G PT++ +MLIRSMGPISE+DM+YSMDCYFRQ
Sbjct: 80 VSRNVSLLLESLLDAYDRQHRPKNSGG-PTVVGVDMLIRSMGPISELDMEYSMDCYFRQK 138
Query: 229 WRDSRLSF-------MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRIN 281
W+D RL F M ++N+SLSIKML+KIW+PDTY NGK SY+HTIT PNKLLRI+
Sbjct: 139 WKDERLRFRRFATETMKEVSNISLSIKMLDKIWKPDTYFFNGKGSYLHTITQPNKLLRIS 198
Query: 282 QDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG 341
+GD+LYSMRLTIKA CPM L +FPMD QSCPL+ GSYAY E++ + W +++ V G
Sbjct: 199 DNGDVLYSMRLTIKAKCPMKLESFPMDRQSCPLMFGSYAYSEEQIRFEW---ENVDLVAG 255
Query: 342 MAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSF 401
M +SQ+D I++P N + K G S+L V FNL RH GYF+IQVYVPCVL+VVLSWVSF
Sbjct: 256 MVLSQYDLIATPIYNISHKINNGRHSMLVVYFNLHRHMGYFLIQVYVPCVLLVVLSWVSF 315
Query: 402 WIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFA 461
WI+REAT+DR+GLG+TTVLTLST D+RTDLPKV Y TALDWF++M F + + T+LE+A
Sbjct: 316 WINREATADRVGLGMTTVLTLSTFGSDTRTDLPKVPYPTALDWFVIMCFAFVMLTLLEYA 375
Query: 462 AVHYFTKLC----YPG 473
VHYFTK+ +PG
Sbjct: 376 GVHYFTKVGSGEYFPG 391
>gi|383847068|ref|XP_003699177.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 593
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 226/301 (75%), Gaps = 7/301 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G PT ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 134 NISELLDNLLRGYDNSVRPDFG-GPPTTVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 192
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML KIW+PDTY NGKQSY+HTIT PNK +R+ +DG +LYS R
Sbjct: 193 RRLAFQGGKETLALSISMLAKIWKPDTYFYNGKQSYLHTITSPNKFVRLYKDGRVLYSSR 252
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y +VY W + ++ M +SQFD ++
Sbjct: 253 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVVYKWNSARQVAIAEDMKLSQFDLVA 312
Query: 352 SPKRNF----TFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+P N+ TF E+S+L V F+L+RH G F+IQVY PC+L+VVLSWVSFW++REA
Sbjct: 313 NPTANYSAPPTFS--HAEYSMLLVYFHLQRHMGNFLIQVYGPCILLVVLSWVSFWLNREA 370
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
T+DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFT
Sbjct: 371 TADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFT 430
Query: 468 K 468
K
Sbjct: 431 K 431
>gi|166851810|ref|NP_001107772.1| GABA-gated ion channel [Tribolium castaneum]
gi|156447609|gb|ABU63597.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006455|gb|EFA02903.1| glycine receptor [Tribolium castaneum]
Length = 505
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/333 (52%), Positives = 240/333 (72%), Gaps = 23/333 (6%)
Query: 149 TNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRS 208
++R P+++NH +NI+ +L+NLL+ Y +S P+ G G P +++ ++++RS
Sbjct: 27 SSRAPQMNNH------------QNISSLLDNLLRGYDNSVRPDFG-GPPAVVEVDIMVRS 73
Query: 209 MGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINN-LSLSIKMLEKIWRPDTYILNGKQSY 267
MGPISE+DM YSMDCYFRQ W D RL+F G N+ L+LSI ML +IW+PDTY NGKQSY
Sbjct: 74 MGPISEVDMTYSMDCYFRQSWVDRRLAFPGDTNDTLALSISMLARIWKPDTYFYNGKQSY 133
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+HTIT PNK +R+ QDG +LYS RLTIKA CPM+L +FPMD Q CPL GS+ Y + ++
Sbjct: 134 LHTITTPNKFVRLYQDGRVLYSSRLTIKAGCPMNLEDFPMDIQRCPLKFGSFGYTAQDVL 193
Query: 328 YHWTPGKSISFVPGMAISQFDFISSPKRNFT-----FKRREGEFSLLQVNFNLKRHRGYF 382
Y W + ++ M +SQFD I++P N T + E+S+L V+F+L+RH G F
Sbjct: 194 YRWNAARQVAIAEDMKLSQFDLIATPAANHTDTIVNSDTKSAEYSMLLVSFHLQRHMGNF 253
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQVY PCVL+VVLSWVSFW++REAT+DR+ LGITTVLT++ + L++RTDLPKV Y TAL
Sbjct: 254 LIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTAL 313
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTKL----CY 471
D+F+ +SF + ATI++FA VHYFTK CY
Sbjct: 314 DFFVFLSFSFIFATIIQFAVVHYFTKYGSGECY 346
>gi|350400005|ref|XP_003485706.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 515
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 225/306 (73%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 56 NISELLDNLLRGYDNSVRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 114
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML +IW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 115 RRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 174
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 175 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQFDLVA 234
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N++ E+S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 235 NPTANYSASATLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 294
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 295 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 354
Query: 470 ----CY 471
CY
Sbjct: 355 GSGECY 360
>gi|350539609|ref|NP_001234887.1| GABA-gated ion channel GRD precursor [Nasonia vitripennis]
gi|269856283|gb|ACZ51424.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 447
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 225/309 (72%), Gaps = 10/309 (3%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S PN G G P +++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 49 NISELLDNLLRGYDNSVRPNFG-GPPAVVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 107
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F L+LSI ML +IW+PDTY NGKQSY+HTIT PNK +R+ QDG +LYS R
Sbjct: 108 RRLAFQSGKETLALSISMLARIWKPDTYFYNGKQSYLHTITSPNKFVRLYQDGRVLYSSR 167
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L +FPMDTQ CPL GSY Y ++Y W + ++ M +SQFD +
Sbjct: 168 LTIKAACPMNLEDFPMDTQRCPLKFGSYGYTTRDVIYKWNSARQVAIAHDMKLSQFDLVG 227
Query: 352 SPKRNFTFKRRE-----GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+P N T E+S+L V+F+LKRH G F+IQVY PCVL+VVLSWVSFW++RE
Sbjct: 228 NPTANATDSTLSQNSLVAEYSMLLVSFHLKRHMGNFLIQVYGPCVLLVVLSWVSFWLNRE 287
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
AT+DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYF
Sbjct: 288 ATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFGFIFATIIQFAVVHYF 347
Query: 467 TKL----CY 471
TK CY
Sbjct: 348 TKYGSGECY 356
>gi|328783196|ref|XP_397242.4| PREDICTED: GABA-gated ion channel isoform 1 [Apis mellifera]
Length = 514
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 225/306 (73%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 56 NISELLDNLLRGYDNSVRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 114
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML +IW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 115 RRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 174
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 175 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQFDLVA 234
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N++ E+S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 235 NPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 294
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 295 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 354
Query: 470 ----CY 471
CY
Sbjct: 355 GSGECY 360
>gi|380013377|ref|XP_003690737.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Apis
florea]
Length = 514
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 225/306 (73%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 56 NISELLDNLLRGYDNSVRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 114
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML +IW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 115 RRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 174
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 175 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQFDLVA 234
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N++ E+S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 235 NPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 294
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 295 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 354
Query: 470 ----CY 471
CY
Sbjct: 355 GSGECY 360
>gi|340715405|ref|XP_003396204.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 515
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 225/306 (73%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 56 NISELLDNLLRGYDNSVRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 114
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML +IW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 115 RRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 174
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 175 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQFDLVA 234
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N++ E+S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 235 NPTANYSASATLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 294
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 295 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 354
Query: 470 ----CY 471
CY
Sbjct: 355 GSGECY 360
>gi|110555510|gb|ABG75735.1| GABA-gated ion channel [Apis mellifera]
Length = 463
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 225/306 (73%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 5 NISELLDNLLRGYDNSVRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 63
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML +IW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 64 RRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 123
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L NFPMDTQ CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 124 LTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQFDLVA 183
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N++ E+S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 184 NPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 243
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 244 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 303
Query: 470 ----CY 471
CY
Sbjct: 304 GSGECY 309
>gi|307183282|gb|EFN70151.1| Gamma-aminobutyric acid receptor alpha-like [Camponotus floridanus]
Length = 488
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 222/306 (72%), Gaps = 7/306 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +L+NLL+ Y +S P+ G G P ++ ++++RSMGPISE+DM YSMDCYFRQ W D
Sbjct: 20 NISDLLDNLLRGYDNSIRPDFG-GPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 78
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F G L+LSI ML KIW+PDTY NGK SY+HTIT PNK +R+ QDG +LYS R
Sbjct: 79 RRLAFQGGKETLALSISMLAKIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSR 138
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFIS 351
LTIKA CPM+L +FPMD Q CPL GS+ Y ++Y W + ++ M +SQFD ++
Sbjct: 139 LTIKAGCPMNLEDFPMDIQRCPLQFGSFGYTTRDVIYKWNSARQVAIAEDMKLSQFDLVA 198
Query: 352 SPKRNFTFKR--REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+P N + +S+L V F+L+RH G F+IQVY PCVL+VVLSWVSFW++REAT+
Sbjct: 199 NPTANHSTAPGFSHANYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATA 258
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA VHYFTK
Sbjct: 259 DRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKY 318
Query: 470 ----CY 471
CY
Sbjct: 319 GSGECY 324
>gi|321478277|gb|EFX89234.1| hypothetical protein DAPPUDRAFT_40350 [Daphnia pulex]
Length = 426
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/303 (54%), Positives = 222/303 (73%), Gaps = 4/303 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N++L+L+ LL NY P+ G G PT + ++++RSMGP+SE DM +S+DCYFRQ WRD
Sbjct: 1 NVSLLLDKLLDNYNHHLRPDIG-GPPTFVDVDIMVRSMGPVSEADMTFSLDCYFRQTWRD 59
Query: 232 SRLSFM---GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
+RL+ + LSLS+ ML++IW+PDTY NGK SY+HTIT PNKL+R+ DG ILY
Sbjct: 60 TRLAHQQVSKSDDQLSLSVSMLDRIWKPDTYFYNGKNSYLHTITTPNKLVRLFPDGRILY 119
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
S RLTIKA+CPM LR FPMD Q CPL +GS+AY + +Y W + I GM +SQFD
Sbjct: 120 SSRLTIKASCPMELRKFPMDVQLCPLNMGSFAYTQTEAIYRWNKDRQIVIASGMKMSQFD 179
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+S+P N+T + G S++ V F+L RH G F+IQVY PC+L+VVLSWVSFW++REAT
Sbjct: 180 LVSAPVSNYTISFKHGNHSMISVRFHLHRHMGSFLIQVYGPCILLVVLSWVSFWLNREAT 239
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
+DR+ LG+TTVLT++ + L++R +LPKV Y TALD F+ +SF + ATI++FA VHYFTK
Sbjct: 240 ADRVSLGVTTVLTMTFLGLEARANLPKVTYPTALDHFIFLSFGFIFATIVQFAFVHYFTK 299
Query: 469 LCY 471
+ +
Sbjct: 300 IGF 302
>gi|241680550|ref|XP_002411571.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
gi|215504306|gb|EEC13800.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
Length = 377
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 206/265 (77%), Gaps = 1/265 (0%)
Query: 206 IRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQ 265
+RSMGP+SE+DM YSMDCYFRQ W D RL+F G + +++LSI MLEKIWRPDT LNGK
Sbjct: 9 VRSMGPVSEVDMTYSMDCYFRQSWLDRRLAFSGSMPSMTLSISMLEKIWRPDTSFLNGKH 68
Query: 266 SYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEK 325
SY+HTIT PNK +R+ QDG +LYS RLT+ A+CPM+L FPMDTQ CPL +GS YP +
Sbjct: 69 SYLHTITQPNKFVRLAQDGTVLYSSRLTVSASCPMNLEKFPMDTQRCPLRIGSSGYPAKD 128
Query: 326 LVYHWTPGKSISFVPGMAISQFDFISSPKRNFT-FKRREGEFSLLQVNFNLKRHRGYFVI 384
+++ W P + + M ++QFD + +P N + F R+EG F++L VNF LKRH GYF+I
Sbjct: 129 VMFRWNPKRRVVIASDMKLNQFDLVQTPTDNQSDFSRKEGPFAMLLVNFQLKRHMGYFLI 188
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
+VY PC L+VVLSWVSFWI+REAT+DRI LG+TT+LT++ ++L+SR DLPKV Y TALD+
Sbjct: 189 EVYAPCTLLVVLSWVSFWINREATADRIALGVTTILTMTFLALESRNDLPKVPYCTALDY 248
Query: 445 FLLMSFFYCIATILEFAAVHYFTKL 469
++ + F + ATI+EFA VHYFTK+
Sbjct: 249 YVAIGFGFVFATIVEFAIVHYFTKV 273
>gi|443727465|gb|ELU14206.1| hypothetical protein CAPTEDRAFT_100858 [Capitella teleta]
Length = 463
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 219/305 (71%), Gaps = 8/305 (2%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNH--GKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ T +LN LL +Y P + T + N+ IRSMGPISE+DM Y MDCYFRQ
Sbjct: 37 AEDATHLLNKLLDSYDKRFHPGYYMNSTGVTEVDVNLNIRSMGPISEMDMAYQMDCYFRQ 96
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
W DSRL F G L +S+ +LE++W+PDT++ NG+QSY+HT+T PNKLLRI+ DG IL
Sbjct: 97 QWTDSRLRFDGN-ETLRVSVNILERLWKPDTHVFNGRQSYLHTVTTPNKLLRIDPDGSIL 155
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVPGMAIS 345
YSMRLTIKA+CPM L NFPMDTQ+CPL+ GS+ Y ++Y W G KSI P M +S
Sbjct: 156 YSMRLTIKASCPMHLENFPMDTQTCPLVFGSHGYGTTDVIYRWKYGVNKSIKMAPDMTLS 215
Query: 346 QFDFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWI 403
QFD I P K N T + G FS L NF L+RH GYF+I VY+PC L+VV+SWV FWI
Sbjct: 216 QFDLIGIPSGKENKTLPMK-GSFSALWANFELRRHMGYFLINVYIPCSLLVVISWVGFWI 274
Query: 404 HREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAV 463
+REATSDRIGLGIT VLT++ + +D+R D+PKV Y+TALD+F+ F + +ATI++FAAV
Sbjct: 275 NREATSDRIGLGITNVLTMAFLGIDNRRDIPKVSYSTALDYFVGTCFAFILATIIQFAAV 334
Query: 464 HYFTK 468
HYFTK
Sbjct: 335 HYFTK 339
>gi|443710633|gb|ELU04795.1| hypothetical protein CAPTEDRAFT_3932 [Capitella teleta]
Length = 432
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 219/306 (71%), Gaps = 6/306 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N T +L+ LL+ Y S P G G PT++ N+ +RSMGPISE DM Y +DCYFRQ W D
Sbjct: 22 NTTQLLDELLQGYDSRLRPGFG-GRPTVVDVNINVRSMGPISETDMAYQLDCYFRQSWVD 80
Query: 232 SRLSFM--GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
+RL F P+ L++S+ +LEKIW+PDT NG++S++HT+T PNKLLRIN+DG ILYS
Sbjct: 81 TRLMFRNDSPLRTLNVSVYVLEKIWKPDTSFFNGRRSHLHTVTTPNKLLRINRDGRILYS 140
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVPGMAISQF 347
MRLTIKA+CPM L NFPMDTQSCPL GS+ Y + Y WT P SI M +SQF
Sbjct: 141 MRLTIKASCPMHLENFPMDTQSCPLKFGSHGYTSSDVQYVWTYGPDASIKLAADMQMSQF 200
Query: 348 DFISSPKRNFT-FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
D I SP N T K + ++L NF L+RH GYF+I +YVPC L+V++SWV FWI+RE
Sbjct: 201 DLIESPAHNETDIKFGDEGSTVLVANFVLRRHMGYFLINLYVPCSLLVIISWVGFWINRE 260
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
AT+DRI LGITTVLT++ + +D+R DLPKV Y+TALD+F+ + F + +A I++FA VH+F
Sbjct: 261 ATADRIALGITTVLTMAFVGIDNRGDLPKVSYSTALDYFVGVCFAFVLAAIIQFAGVHFF 320
Query: 467 TKLCYP 472
TK P
Sbjct: 321 TKHGTP 326
>gi|170040777|ref|XP_001848164.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864375|gb|EDS27758.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 618
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 230/365 (63%), Gaps = 60/365 (16%)
Query: 158 HLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDM 217
L ++ H NI+ +L+NLL+ Y +S P+ G G P +I+ ++++RSMGPISE+DM
Sbjct: 69 RLTQRNNHG-----NISELLDNLLRGYDNSIRPDFG-GPPAVIEVDIMVRSMGPISEVDM 122
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
YSMDCYFRQ W D RL F G + L+LSI ML +IW+PDTY NGKQSY+HTIT PNK
Sbjct: 123 TYSMDCYFRQSWVDRRLEFKGAHDTLALSISMLGRIWKPDTYFYNGKQSYLHTITTPNKF 182
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-I 336
+R+ QDG +LYS RLTIKA CPM+L +FPMD Q CPL GS+ Y ++Y W G+S +
Sbjct: 183 VRLYQDGRVLYSSRLTIKAGCPMNLADFPMDIQRCPLKFGSFGYTSNDVLYRWNSGRSAV 242
Query: 337 SFVPGMAISQFDFISSPKRNFT--------------FKRREG------------------ 364
+ M +SQFD + P N T EG
Sbjct: 243 AIAEDMKLSQFDLVDCPAGNVTDRVVHSTASMGAAVLNSAEGDPDAVGGRIFRDIIISHI 302
Query: 365 ---------------------EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWI 403
EFS+L V+F+L+RH G F+IQVY PCVL+VVLSWVSFW+
Sbjct: 303 SLICFLLRLTIFKIFSSIFPAEFSMLLVSFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWL 362
Query: 404 HREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAV 463
+REAT+DR+ LGITTVLT++ + L++RTDLPKV Y TALD+F+ +SF + ATI++FA V
Sbjct: 363 NREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFGFIFATIIQFAVV 422
Query: 464 HYFTK 468
HYFTK
Sbjct: 423 HYFTK 427
>gi|443716699|gb|ELU08090.1| hypothetical protein CAPTEDRAFT_89972, partial [Capitella teleta]
Length = 313
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/284 (58%), Positives = 209/284 (73%), Gaps = 10/284 (3%)
Query: 192 HGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLE 251
H PT++ N+ IRSMGPISE+DM Y MDCYFRQ W D RL F G L +SI +LE
Sbjct: 5 HSVRGPTLVDVNLNIRSMGPISEMDMAYQMDCYFRQQWTDRRLQFNGN-ETLRVSINVLE 63
Query: 252 KIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQS 311
++W+PDT++ NG+QSY+H +T PNKLLRI+ DG +LYSMRLTIKA+CPM L FPMDTQ+
Sbjct: 64 RLWKPDTHVFNGRQSYLHVVTSPNKLLRIDPDGSVLYSMRLTIKASCPMHLEKFPMDTQT 123
Query: 312 CPLILGSYAYPIEKLVYHWTPG--KSISFVPGMAISQFDFIS----SPKRNFTFKRREGE 365
CPLILGS+ Y + +VY W G KS+ P M +SQFD + + FK G
Sbjct: 124 CPLILGSHGYTLSDVVYRWMYGDNKSVKMAPDMTLSQFDLVGIKEGQDNKTIQFK---GV 180
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
FS+L V+F L+RH GYF+I VYVPC L+VVLSWV FWI+REATSDRI LGIT VLT++ +
Sbjct: 181 FSMLWVHFRLRRHMGYFLINVYVPCGLLVVLSWVGFWINREATSDRIALGITNVLTMAFL 240
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+D+R DLPKV Y+TALD+F+ M F + +ATIL+FA VH+FTK+
Sbjct: 241 GIDNRRDLPKVSYSTALDYFVGMCFAFILATILQFAMVHFFTKV 284
>gi|443716697|gb|ELU08088.1| hypothetical protein CAPTEDRAFT_148064 [Capitella teleta]
Length = 393
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/263 (60%), Positives = 197/263 (74%), Gaps = 2/263 (0%)
Query: 209 MGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYV 268
MGPISE DM YSMD YFRQ WRD RL F GP + L++S +L +IW+PDTY NG+ +Y+
Sbjct: 1 MGPISESDMTYSMDTYFRQTWRDDRLKFSGPYDQLAVSTMILNEIWKPDTYFHNGQGAYL 60
Query: 269 HTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVY 328
HT T PNKLLRI +G +LYSMRLTIKA+CPM L+ FP+D QSCPL GSYAY + +VY
Sbjct: 61 HTTTTPNKLLRIRNNGVVLYSMRLTIKASCPMYLQRFPVDMQSCPLQFGSYAYTSKHVVY 120
Query: 329 HWTPGK--SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQV 386
W G+ SI M +SQFD +S+P GEFS L+V+F L+RH GYF+IQV
Sbjct: 121 EWKNGQHNSIETAGDMRLSQFDLVSTPAETVVVSNNSGEFSTLKVHFVLQRHMGYFLIQV 180
Query: 387 YVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFL 446
YVPC LIV+LSWVSFWI+REATSDR+ LGI T LTL+TIS+D+R D+P+V YATALD F
Sbjct: 181 YVPCTLIVILSWVSFWINREATSDRVSLGILTELTLTTISMDTRNDVPRVAYATALDHFF 240
Query: 447 LMSFFYCIATILEFAAVHYFTKL 469
+M + + AT+LEFA VHYFTK+
Sbjct: 241 IMCYVFVTATLLEFAGVHYFTKI 263
>gi|242025548|ref|XP_002433186.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212518727|gb|EEB20448.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 423
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 164/280 (58%), Positives = 204/280 (72%), Gaps = 11/280 (3%)
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGK 264
++RSMGPISEIDM YSMD YFRQ W D RL+F G L+LSI MLEKIW+PDTY NGK
Sbjct: 1 MVRSMGPISEIDMTYSMDLYFRQSWIDKRLAFKGNKETLALSITMLEKIWKPDTYFYNGK 60
Query: 265 QSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIE 324
QSY+HTIT PNK +R+ QDG +LYS RLTIKA CPM+L NFPMDTQ CPL GS+ Y
Sbjct: 61 QSYLHTITTPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLKFGSFGYTTN 120
Query: 325 KLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRR-------EGEFSLLQVNFNLKR 377
+VY W + I M +SQFD I++ N T K ++S+L V+F+L+R
Sbjct: 121 DVVYKWNSQRQIVIAEDMKLSQFDLIANISANETDKVNIVHSRVYTIKYSMLLVSFHLQR 180
Query: 378 HRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVR 437
H G F+IQVY PC+L+VVLSWVSFW++REAT+DR+ LGITTVLT++ + L++RTDLPKV
Sbjct: 181 HMGNFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVP 240
Query: 438 YATALDWFLLMSFFYCIATILEFAAVHYFTKL----CYPG 473
Y TALD+F+ +SF + ATI++FA VHYFTK CY G
Sbjct: 241 YPTALDFFVFLSFAFIFATIIQFAVVHYFTKYGSGECYFG 280
>gi|66771987|gb|AAY55305.1| IP12479p [Drosophila melanogaster]
Length = 416
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+H ITVPNKLLR++Q+G ILYSMRLTIKA CPM L+NFPMD QSCPL++GSY Y ++L+
Sbjct: 7 IHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLI 66
Query: 328 YHW-TPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQV 386
Y W ++SFVPGM ++QFD IS RNFT RREG+FS+L V FNLKRH GYF+IQV
Sbjct: 67 YEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQV 126
Query: 387 YVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFL 446
YVPC+LIVVLSWVSFWIHREATSDR+ L +T+VLTLSTISLDSRTDLPKV+YATALDWFL
Sbjct: 127 YVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFL 186
Query: 447 LMSFFYCIATILEFAAVHYFTKL 469
LMSF YCIAT+LEFA VHYFTKL
Sbjct: 187 LMSFLYCIATLLEFAGVHYFTKL 209
>gi|325296907|ref|NP_001191487.1| GABA A receptor alpha subunit precursor [Aplysia californica]
gi|17225111|gb|AAL37252.1|AF322878_1 GABA A receptor alpha subunit [Aplysia californica]
Length = 448
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/299 (50%), Positives = 206/299 (68%), Gaps = 3/299 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ VL++LL+ Y P G GE + ++ +RSMGPISE++M Y++DCYFRQ W D
Sbjct: 33 NISQVLDSLLEGYDKRLRPGFG-GEALTVNADISLRSMGPISELNMIYTLDCYFRQRWMD 91
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+ + NL+L IK+LE+IW PDT NG++SY+H IT N+ LRI +G +L+S R
Sbjct: 92 HRLAMNVSLENLTLGIKILERIWHPDTVFYNGQKSYLHAITSHNRFLRIAANGTVLFSQR 151
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVPGMAISQFDF 349
LTI+A C M NFPMD Q CPL++GS+AY + ++Y W G SI P + +SQFD
Sbjct: 152 LTIQATCRMHPENFPMDIQHCPLLIGSFAYSTDDVIYKWRYGLQGSIELAPDLRLSQFDL 211
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ P N+T + S+L V F L RH GYF+I +Y+PC L+VVLSW SFWI+REAT+
Sbjct: 212 VGYPLTNYTGLVKGAVHSVLCVTFQLSRHTGYFLINLYLPCCLLVVLSWASFWINREATA 271
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
DRI LG TTVLT++ + +++++ LPKV Y TALD ++ + F + IAT +EFA VHYFTK
Sbjct: 272 DRIALGSTTVLTMTILGIENKSQLPKVSYITALDVYVALCFVFVIATTIEFAVVHYFTK 330
>gi|348575239|ref|XP_003473397.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
isoform 1 [Cavia porcellus]
Length = 453
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 217/325 (66%), Gaps = 4/325 (1%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W + ++ N L + + +N++ +L+NLL+ Y + P G G T +KT++ +
Sbjct: 7 WLYIILRLENSLAQLENEGNFYSENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVT 65
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S GP+S+++M+Y+MD +FRQ W D RL F+GP LSL+ M+ KIW PDT+ NGK+S
Sbjct: 66 SFGPVSDVEMEYTMDVFFRQTWTDERLKFVGPTEILSLNNLMVSKIWTPDTFFRNGKKSI 125
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++
Sbjct: 126 AHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEII 185
Query: 328 YHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y W G S VP + S Q+D I + T K GE+ ++ V+F+L+R GYF+I
Sbjct: 186 YTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVHFHLQRKMGYFMI 245
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q+Y PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 246 QIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDW 305
Query: 445 FLLMSFFYCIATILEFAAVHYFTKL 469
F+ + F + + ++EFAAV+YFT L
Sbjct: 306 FIAVCFAFVFSALIEFAAVNYFTNL 330
>gi|221136860|ref|NP_001137557.1| gamma-aminobutyric acid receptor subunit alpha-6 [Bos taurus]
gi|296485091|tpg|DAA27206.1| TPA: gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Bos
taurus]
gi|440913395|gb|ELR62848.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Bos grunniens
mutus]
Length = 453
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + KNI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 VENALGKLEDEGNFYSKNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|426230034|ref|XP_004009088.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Ovis
aries]
Length = 453
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + KNI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 VENALGKLEDEGNFYSKNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|73954094|ref|XP_546263.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Canis
lupus familiaris]
Length = 453
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + KNI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 VENTLGKLEDEGNFYSKNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|351696716|gb|EHA99634.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Heterocephalus
glaber]
Length = 453
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/322 (47%), Positives = 212/322 (65%), Gaps = 4/322 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N L + K +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LGNSLAQLKDEGNFYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHVCPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKLCYPG 473
+ + ++EFAAV+YFT L G
Sbjct: 313 FVFSALIEFAAVNYFTSLQTRG 334
>gi|395817130|ref|XP_003782028.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Otolemur garnettii]
Length = 453
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N L + + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LENALGKLEDEGNFYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V+F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVHFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|311273995|ref|XP_003134138.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Sus
scrofa]
Length = 453
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + +N++ +L+NLL+ Y + P G G T ++T++ + S GP+S+
Sbjct: 14 VENALGKLEDEGNFYSENVSRILDNLLEGYDNRLRPGFG-GAVTEVQTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE++++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|410949389|ref|XP_003981405.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Felis
catus]
Length = 453
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 VENTLGKLEDEGNFYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|426350886|ref|XP_004042994.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Gorilla gorilla gorilla]
Length = 449
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 213/319 (66%), Gaps = 4/319 (1%)
Query: 154 KVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
++ N L + + +N++ +L+NLL+ Y + P G G T +KT++ + S GP+S
Sbjct: 9 RLENALGKLEVEGNFYSENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVS 67
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITV 273
+++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T
Sbjct: 68 DVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTT 127
Query: 274 PNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG 333
PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 128 PNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKG 187
Query: 334 KSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC
Sbjct: 188 PLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPC 247
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 248 IMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCF 307
Query: 451 FYCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 308 AFVFSALIEFAAVNYFTNL 326
>gi|403287098|ref|XP_003934794.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Saimiri boliviensis boliviensis]
Length = 453
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N L + + + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LENALGKLEDEGDLYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|301753447|ref|XP_002912565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Ailuropoda melanoleuca]
gi|281345131|gb|EFB20715.1| hypothetical protein PANDA_000326 [Ailuropoda melanoleuca]
Length = 453
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/316 (48%), Positives = 211/316 (66%), Gaps = 4/316 (1%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
N L + + KNI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+++
Sbjct: 16 NTLGKLEDEGNFYSKNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVE 74
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNK
Sbjct: 75 MEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
L RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 135 LFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLY 194
Query: 337 SF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++
Sbjct: 195 SVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMT 254
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 255 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 314
Query: 454 IATILEFAAVHYFTKL 469
+ ++EFAAV+YFT L
Sbjct: 315 FSALIEFAAVNYFTNL 330
>gi|296192673|ref|XP_002744174.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Callithrix jacchus]
Length = 453
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N L + + + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LENALGKLEDEGSLYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|5813764|gb|AAD52002.1| GABAA receptor alpha 6 subunit [Mus musculus]
Length = 452
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 29 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 87
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 88 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 147
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 148 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 207
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 208 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 267
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 268 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 327
Query: 468 KL 469
L
Sbjct: 328 NL 329
>gi|149052305|gb|EDM04122.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Rattus norvegicus]
Length = 453
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 89 DERLKFKGPAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|1470364|gb|AAB36480.1| gamma-aminobutyric acid type A receptor alpha 6 subunit [Homo
sapiens]
Length = 453
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|332238943|ref|XP_003268662.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Nomascus leucogenys]
Length = 453
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N L + + +N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LENALGKLEDEGNFYSENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|426350884|ref|XP_004042993.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Gorilla gorilla gorilla]
Length = 453
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|157389018|ref|NP_000802.2| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Homo
sapiens]
gi|126302548|sp|Q16445.2|GBRA6_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|64654354|gb|AAH96242.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|64654801|gb|AAH96241.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563331|gb|AAH99641.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563375|gb|AAH99640.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|119581946|gb|EAW61542.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|158259945|dbj|BAF82150.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|11055259|gb|AAG28024.1|AF256197_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|11055261|gb|AAG28025.1|AF256198_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|5813766|gb|AAD52004.1| GABAA receptor alpha 6 subunit [Mus musculus]
gi|148700395|gb|EDL32342.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Mus musculus]
Length = 453
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 89 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|153792343|ref|NP_001093111.1| gamma-aminobutyric acid receptor subunit alpha-6 isoform 1
precursor [Mus musculus]
gi|341941084|sp|P16305.3|GBRA6_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|74149350|dbj|BAE22438.1| unnamed protein product [Mus musculus]
gi|148877527|gb|AAI45703.1| Gabra6 protein [Mus musculus]
gi|219519815|gb|AAI45159.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 [Mus
musculus]
Length = 453
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 89 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|443716698|gb|ELU08089.1| hypothetical protein CAPTEDRAFT_148069 [Capitella teleta]
Length = 442
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 162/323 (50%), Positives = 202/323 (62%), Gaps = 51/323 (15%)
Query: 197 PTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRP 256
PT + ++ IRSMGPISE+DM YSMD YFRQ W D RL F + L +S +L+++W P
Sbjct: 2 PTKVLVDLNIRSMGPISEVDMTYSMDTYFRQTWSDERLRFSKEYDELFVSTTILDQMWIP 61
Query: 257 DTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLIL 316
DTY NG SY+HT TVPNKLLRI +G+ILYSMR+TIKA+CPM L FP+D QSCPL
Sbjct: 62 DTYFYNGLGSYLHTTTVPNKLLRIRPNGEILYSMRITIKASCPMYLHYFPIDVQSCPLQF 121
Query: 317 GSYAYPIEKLVYHWTPG--KSISFVPGMAISQFDFISSPK-------------------- 354
GSYAY E++VY W G +SI M +SQFD + +P
Sbjct: 122 GSYAYTKEQVVYEWKLGANQSIETALDMQLSQFDLVRTPADTLVMSNNNISTGNTIFGLL 181
Query: 355 ---------------------RNFTFK--------RREGEFSLLQVNFNLKRHRGYFVIQ 385
+F+ K R E+S L+VNF L+RH GYF+IQ
Sbjct: 182 AFSLSPSCYLDKECKKEKKREESFSLKPYLGEKSRRIASEYSTLRVNFVLQRHMGYFLIQ 241
Query: 386 VYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWF 445
VYVPC LIVVLSWVSFWI+REA DR+ LGI LTL+T+S+D+R DLPKV Y TALD+F
Sbjct: 242 VYVPCTLIVVLSWVSFWINREAVEDRVNLGILAELTLTTVSMDTRDDLPKVPYPTALDYF 301
Query: 446 LLMSFFYCIATILEFAAVHYFTK 468
+M + + AT++EFA VHYFTK
Sbjct: 302 NIMCYLFVTATLIEFAIVHYFTK 324
>gi|344265226|ref|XP_003404686.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Loxodonta africana]
Length = 453
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 210/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
K+ + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 22 KEEGNLYSQNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMD 80
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q
Sbjct: 81 VFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQ 140
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP
Sbjct: 141 NGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPE 200
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D I + T + GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS V
Sbjct: 201 ESSSLLQYDLIGQTVSSETIQSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQV 260
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 261 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 320
Query: 460 FAAVHYFTKL 469
FAAV+YFT L
Sbjct: 321 FAAVNYFTNL 330
>gi|114603240|ref|XP_001144345.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Pan troglodytes]
Length = 453
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|397473110|ref|XP_003808063.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pan
paniscus]
Length = 453
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|297676573|ref|XP_002816205.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pongo
abelii]
Length = 453
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|109079634|ref|XP_001086065.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Macaca
mulatta]
gi|402873304|ref|XP_003900519.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Papio
anubis]
gi|355691820|gb|EHH27005.1| hypothetical protein EGK_17099 [Macaca mulatta]
gi|355750394|gb|EHH54732.1| hypothetical protein EGM_15624 [Macaca fascicularis]
Length = 453
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|224068165|ref|XP_002193341.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Taeniopygia guttata]
Length = 465
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 210/325 (64%), Gaps = 4/325 (1%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W V L ++ + +NIT +L+ LL Y + P G G T +KT++ +
Sbjct: 7 WACVAVSVGTALGDQGDGADLYSENITRILDKLLDGYDNRLRPGFG-GAVTEVKTDIYVT 65
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S GP+S+++M+Y+MD +FRQ W D RL F GP L L+ M+ KIW PDT+ NGK+S
Sbjct: 66 SFGPVSDVEMEYTMDVFFRQTWTDERLKFSGPTEILRLNNLMVSKIWTPDTFFRNGKKSI 125
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++
Sbjct: 126 AHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEII 185
Query: 328 YHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y W G S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+I
Sbjct: 186 YTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMI 245
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q+Y PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 246 QIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDW 305
Query: 445 FLLMSFFYCIATILEFAAVHYFTKL 469
F+ + F + + ++EFAAV+YFT L
Sbjct: 306 FIAVCFAFVFSALIEFAAVNYFTNL 330
>gi|354495030|ref|XP_003509635.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Cricetulus griseus]
Length = 453
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 207/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 89 DERLKFRGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|194219631|ref|XP_001503447.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Equus
caballus]
Length = 453
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 211/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + +NI+ +L+NLL+ Y + P G T +KT++ + S GP+S+
Sbjct: 14 VENALGKLEDEGNFYSENISRILDNLLEGYDNRLRPGFGNAV-TEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 313 FVFSALIEFAAVNYFTNL 330
>gi|334311425|ref|XP_001379989.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Monodelphis domestica]
Length = 449
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 205/303 (67%), Gaps = 4/303 (1%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
KNI+ +L+NLL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 28 SKNISRILDNLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTW 86
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+
Sbjct: 87 TDERLKFRGPSKILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYT 146
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--Q 346
MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q
Sbjct: 147 MRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQ 206
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+D I + K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E
Sbjct: 207 YDLIGQTVSSEIIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 266
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF
Sbjct: 267 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 326
Query: 467 TKL 469
T L
Sbjct: 327 TNL 329
>gi|395509128|ref|XP_003758857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Sarcophilus harrisii]
Length = 459
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/316 (47%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
N L + + KNI+ +L+NLL Y + P G G T +KT++ + S GP+S+++
Sbjct: 20 NALGDPVYEGNLYSKNISRILDNLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVE 78
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNK
Sbjct: 79 MEYTMDVFFRQTWTDERLKFRGPSKILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNK 138
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
L RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 139 LFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLY 198
Query: 337 SF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S VP + S Q+D I + K GE+ ++ V F+L+R GYF+IQ+Y PC++
Sbjct: 199 SVEVPQESSSLLQYDLIGQTVSSEIIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMT 258
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 259 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 318
Query: 454 IATILEFAAVHYFTKL 469
+ ++EFAAV+YFT L
Sbjct: 319 FSALIEFAAVNYFTNL 334
>gi|449267232|gb|EMC78198.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Columba livia]
Length = 465
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 210/325 (64%), Gaps = 4/325 (1%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W ++ L + + +NIT +L+ LL Y + P G G T +KT++ +
Sbjct: 7 WVCVAVSLNKALGAQGDGGDLYSENITRILDKLLDGYDNRLRPGFG-GAVTEVKTDIYVT 65
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S GP+S+++M+Y+MD +FRQ W D RL F GP L L+ M+ KIW PDT+ NGK+S
Sbjct: 66 SFGPVSDVEMEYTMDVFFRQTWTDERLKFSGPTEILRLNNLMVSKIWTPDTFFRNGKKSI 125
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++
Sbjct: 126 AHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEII 185
Query: 328 YHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y W G S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+I
Sbjct: 186 YTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMI 245
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q+Y PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 246 QIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDW 305
Query: 445 FLLMSFFYCIATILEFAAVHYFTKL 469
F+ + F + + ++EFAAV+YFT L
Sbjct: 306 FIAVCFAFVFSALIEFAAVNYFTNL 330
>gi|11177872|ref|NP_068613.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Rattus
norvegicus]
gi|232127|sp|P30191.1|GBRA6_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|204214|gb|AAC42034.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|288180|emb|CAA39273.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|227076|prf||1613454A GABAa receptor alpha6
Length = 453
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 206/302 (68%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ +G ILY+M
Sbjct: 89 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|291387763|ref|XP_002710401.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 453
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+ N + + + + +NI+ +L++LL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 LENAMGKLEDEGNLYSENISRILDSLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC+
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCI 252
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 253 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 312
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT +
Sbjct: 313 FVFSALIEFAAVNYFTNV 330
>gi|45384230|ref|NP_990389.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Gallus
gallus]
gi|3023835|sp|Q90845.1|GBRA6_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|1149507|emb|CAA64069.1| GABA-A receptor a6 subunit [Gallus gallus]
gi|1589637|prf||2211380A GABA type A receptor:SUBUNIT=alpha6
Length = 465
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 204/302 (67%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENITRILDKLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|149412517|ref|XP_001505750.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Ornithorhynchus anatinus]
Length = 451
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 207/314 (65%), Gaps = 4/314 (1%)
Query: 159 LKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMD 218
L K + +NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+
Sbjct: 18 LGSPKDEGSLYSENITRILDKLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEME 76
Query: 219 YSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLL 278
Y+MD +FRQ W D RL F GP L L+ M+ KIW PDT+ NGK+S H +T PNKL
Sbjct: 77 YTMDVFFRQTWIDERLKFRGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLF 136
Query: 279 RINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF 338
RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S
Sbjct: 137 RIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSV 196
Query: 339 -VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+
Sbjct: 197 EVPQESSSLLQYDLIGQTVSSETIKSNTGEYIIMTVYFHLQRKMGYFMIQIYTPCIMTVI 256
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + +
Sbjct: 257 LSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFS 316
Query: 456 TILEFAAVHYFTKL 469
++EFAAV+YFT L
Sbjct: 317 ALIEFAAVNYFTNL 330
>gi|432949781|ref|XP_004084255.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Oryzias latipes]
Length = 473
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 204/301 (67%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 50 NITRILDRLLDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWID 108
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MR
Sbjct: 109 ERLKFDGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMR 168
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFD 348
LTI A CPM L NFPMD +CPL GSYAYPI ++VY W G S S VP + S Q+D
Sbjct: 169 LTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPSSSVEVPQESSSLLQYD 228
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I GE++++ V+F+L+R G+F+IQ Y+PC++ V+L+ VSFWI++E+
Sbjct: 229 LIGQTXXXXXVASLAGEYAIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESV 288
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF+
Sbjct: 289 PARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFST 348
Query: 469 L 469
L
Sbjct: 349 L 349
>gi|351698146|gb|EHB01065.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Heterocephalus
glaber]
Length = 555
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + M +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNEKEEKMCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|359321074|ref|XP_539251.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Canis
lupus familiaris]
Length = 568
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/327 (44%), Positives = 219/327 (66%), Gaps = 4/327 (1%)
Query: 146 THWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNML 205
++ +N++ ++ ++ +K + + +N T +L++LL Y + P G G T +KT++
Sbjct: 34 SNMSNKMSILNESPEQNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIY 92
Query: 206 IRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQ 265
+ S GP+S+++M+Y+MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+
Sbjct: 93 VTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKK 152
Query: 266 SYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEK 325
S H +T PNKL RI ++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +
Sbjct: 153 SVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSE 212
Query: 326 LVYHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYF 382
++Y WT G S VP + S Q+D + + T K GE+ ++ V F+L+R GYF
Sbjct: 213 MIYTWTKGPEKSVEVPKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYF 272
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ Y+PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+
Sbjct: 273 MIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAM 332
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTKL 469
DWF+ + F + + ++EFAAV+YFT +
Sbjct: 333 DWFIAVCFAFVFSALIEFAAVNYFTNI 359
>gi|344288339|ref|XP_003415908.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Loxodonta africana]
Length = 555
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L NFPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVNFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|391346324|ref|XP_003747426.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 369
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 189/275 (68%), Gaps = 1/275 (0%)
Query: 196 EPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWR 255
PT I T++ IRS GP+SE DM YSMDCYFRQ WRD RL F G + LS+S + LE+IW
Sbjct: 77 RPTKIITDVEIRSFGPVSENDMMYSMDCYFRQSWRDERLKFEGSLKKLSVSWQFLERIWT 136
Query: 256 PDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLI 315
PDTYI NGK SY+H ++VPNK +R++ DG + YSMRLTI+A CPM LR +P+DTQ+CPL
Sbjct: 137 PDTYINNGKSSYLHKVSVPNKFVRLHGDGTLKYSMRLTIRAKCPMHLRKYPLDTQACPLE 196
Query: 316 LGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEF-SLLQVNFN 374
+GSYAY + +V+HW + + +SQ++F+ N T + GE S L F
Sbjct: 197 IGSYAYSPKDVVFHWNGKAPVVISKDVTLSQYEFVDILSNNLTVELPNGETRSTLVTRFI 256
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
L+R RGYF++Q+Y PC +IV SWV+FWI+R + R+ +G TTVLTL T+ R LP
Sbjct: 257 LRRRRGYFILQIYAPCSMIVGASWVAFWINRNDAAGRVAVGATTVLTLVTMGFGGRASLP 316
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
KV YATALDWF++M F + A ++E+A V+Y +L
Sbjct: 317 KVNYATALDWFVVMCFSFVFAAMVEYACVNYIERL 351
>gi|149702776|ref|XP_001496046.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Equus caballus]
Length = 555
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCQENFTRILDGLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|348571820|ref|XP_003471693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Cavia porcellus]
Length = 536
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 211/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNEKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V+F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVHFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|109074156|ref|XP_001101231.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Macaca
mulatta]
gi|355687260|gb|EHH25844.1| GABA(A) receptor subunit alpha-4 [Macaca mulatta]
gi|355749254|gb|EHH53653.1| GABA(A) receptor subunit alpha-4 [Macaca fascicularis]
Length = 554
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|402869290|ref|XP_003898696.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Papio
anubis]
Length = 554
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|344288341|ref|XP_003415909.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Loxodonta africana]
Length = 536
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L NFPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVNFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|296196621|ref|XP_002745921.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Callithrix jacchus]
Length = 554
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|405950124|gb|EKC18128.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Crassostrea
gigas]
Length = 431
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 208/300 (69%), Gaps = 3/300 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHG-KGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
N+T L+++LK + G K P II T++L+RSMGPISE DM YS++ YFRQ W
Sbjct: 17 NVTSTLDDVLKPRKYDRRLRPGFKHTPVIIYTDILLRSMGPISEKDMVYSIEIYFRQRWM 76
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D+RL+ I N+SL+IK+LE++W PDT NG+QSY+H I PN+ +RI+ +G + +S
Sbjct: 77 DARLATNMSIENISLNIKVLERLWYPDTVFYNGRQSYLHFIPTPNRFIRISPNGSMYFSQ 136
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVPGMAISQFD 348
RLT+KA C M L+N+P+D+Q C L +GS+AY + +VY W P S+ M +SQFD
Sbjct: 137 RLTVKAICQMELQNYPLDSQICDLQIGSFAYSYDDVVYAWRYGPLNSVQLATDMTMSQFD 196
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I+ + F R+ S L V F L+RH GYF+I V PC L+VVLSWVSFWI+REAT
Sbjct: 197 LINYSATSLNFSRKGDVHSCLMVRFGLRRHTGYFLIHVVTPCSLLVVLSWVSFWINREAT 256
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
+DRI LG TTVLT++ ++LD+R +LP+V YATALD ++ M F + ++T+++FA VH FTK
Sbjct: 257 ADRIALGTTTVLTMTFLALDTRDELPRVTYATALDLYVAMCFIFVLSTLVQFAIVHLFTK 316
>gi|403284710|ref|XP_003933701.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Saimiri boliviensis boliviensis]
Length = 553
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|338723634|ref|XP_003364763.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Equus caballus]
Length = 536
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 213/322 (66%), Gaps = 5/322 (1%)
Query: 152 LPKVSNHL-KEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMG 210
LP+ N + +K + + +N T +L+ LL Y + P G G T +KT++ + S G
Sbjct: 7 LPRSLNETPGQNQKEEKLCQENFTRILDGLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFG 65
Query: 211 PISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHT 270
P+S+++M+Y+MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H
Sbjct: 66 PVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHN 125
Query: 271 ITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW 330
+T PNKL RI ++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y W
Sbjct: 126 MTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTW 185
Query: 331 TPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
T G S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y
Sbjct: 186 TKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTY 245
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+
Sbjct: 246 IPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIA 305
Query: 448 MSFFYCIATILEFAAVHYFTKL 469
+ F + + ++EFAAV+YFT +
Sbjct: 306 VCFAFVFSALIEFAAVNYFTNI 327
>gi|348519036|ref|XP_003447037.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Oreochromis niloticus]
Length = 436
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 204/301 (67%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 24 NITRILDRLLDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWID 82
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MR
Sbjct: 83 ERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMR 142
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFD 348
LTI A CPM L NFPMD +CPL GSYAYPI ++VY W G S VP + S Q+D
Sbjct: 143 LTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYD 202
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K GE+ ++ V+F+L+R G+F+IQ Y+PC++ V+L+ VSFWI++E+
Sbjct: 203 LIGQTVSSERLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESV 262
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF+
Sbjct: 263 PARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFST 322
Query: 469 L 469
L
Sbjct: 323 L 323
>gi|118090514|ref|XP_420724.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Gallus gallus]
Length = 554
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ KK + + +N T +LN+LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 35 QSKKEEKLWPENFTSILNSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 93
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 94 MDVFFRQTWVDKRLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRI 153
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 154 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 213
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 214 PEESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 273
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 274 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 333
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 334 IEFAAVNYFTNI 345
>gi|410915042|ref|XP_003970996.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Takifugu rubripes]
Length = 457
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 204/301 (67%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 45 NITRILDRLLDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWID 103
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MR
Sbjct: 104 ERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMR 163
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFD 348
LTI A CPM L NFPMD +CPL GSYAYPI ++VY W G S VP + S Q+D
Sbjct: 164 LTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYD 223
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K GE+ ++ V+F+L+R G+F+IQ Y+PC++ V+L+ VSFWI++E+
Sbjct: 224 LIGQTVSSERLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESV 283
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF+
Sbjct: 284 PARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFST 343
Query: 469 L 469
L
Sbjct: 344 L 344
>gi|395843745|ref|XP_003794634.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Otolemur garnettii]
Length = 555
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTINAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|380796557|gb|AFE70154.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor, partial [Macaca mulatta]
Length = 541
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 23 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 81
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 82 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 141
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 142 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 201
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 202 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 261
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 262 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 321
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 322 IEFAAVNYFTNI 333
>gi|357606120|gb|EHJ64924.1| cys-loop ligand-gated ion channel subunit [Danaus plexippus]
Length = 270
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 155/170 (91%)
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M LRNFPMD QSCPLILGSYAY ++LVY W +S++FVPGM +SQFD IS P RNFTF
Sbjct: 1 MELRNFPMDRQSCPLILGSYAYSNQQLVYQWQNSQSVNFVPGMTLSQFDLISFPYRNFTF 60
Query: 360 KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
RREG+FS+LQV+FNLKRH GYF+IQVYVPC+LIVVLSWVSFWIHREATSDR+GLGITTV
Sbjct: 61 TRREGDFSVLQVSFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLGITTV 120
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT+LEFA VHYFTK+
Sbjct: 121 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFTKV 170
>gi|426231659|ref|XP_004009856.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Ovis aries]
Length = 555
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNV 346
>gi|260812519|ref|XP_002600968.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
gi|229286258|gb|EEN56980.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
Length = 275
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 196/273 (71%), Gaps = 3/273 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T++ T++ + S+GP+SE+DM+Y++DC+FRQ W+D+RL F GP L L+ ML+KIW PD
Sbjct: 1 TVVMTDIYVTSIGPVSEVDMEYTLDCFFRQTWQDTRLQFTGPPKELRLNNVMLDKIWTPD 60
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
TY NGK++ HT+T PNKL RI +DG +LY+MRLTI A CPM L NFPMDTQ CPL G
Sbjct: 61 TYFRNGKKAIAHTMTTPNKLFRIQEDGTVLYTMRLTIHAECPMMLENFPMDTQICPLRFG 120
Query: 318 SYAYPIEKLVYHWTPG--KSISFV-PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SY YP E++ +HW G KS++ ++Q++ + G + ++ V+F
Sbjct: 121 SYGYPKEEIEFHWKYGDKKSVTISEEDRRLNQYELQRHEAGKELKISKSGHYIIMTVDFY 180
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR+ GYF+IQ Y+PC+LIVVLSWVSFWI++E+T R+ LGITTVLT++T+S +R LP
Sbjct: 181 LKRNMGYFLIQTYLPCILIVVLSWVSFWINKESTPARVALGITTVLTMTTLSTSARHSLP 240
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
KV YA A+DWF+ + F + A+++E+A V+YF+
Sbjct: 241 KVSYANAMDWFIAVCFAFVFASLVEYACVNYFS 273
>gi|301763284|ref|XP_002917059.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Ailuropoda melanoleuca]
gi|281338654|gb|EFB14238.1| hypothetical protein PANDA_005231 [Ailuropoda melanoleuca]
Length = 555
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|62955617|ref|NP_001017822.1| gamma-aminobutyric acid receptor subunit alpha-4 [Danio rerio]
gi|62202172|gb|AAH92794.1| Zgc:110204 [Danio rerio]
gi|182889054|gb|AAI64581.1| Zgc:110204 protein [Danio rerio]
Length = 557
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/308 (46%), Positives = 207/308 (67%), Gaps = 4/308 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
+K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 38 RKDEKLYPENFTRILDRLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 96
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GP+ L L+ M+ K+W PDT+ NGK+S H +T PN+L RI +
Sbjct: 97 VFFRQTWVDRRLRYEGPVEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMK 156
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP 340
+G ILY+MRLTI A CPM L NFPMD SCPL GSYAYP +++Y WT P S+ P
Sbjct: 157 NGTILYTMRLTISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPP 216
Query: 341 -GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
++ Q+D I + T K GE+ ++ V F+LKR GYF+IQ Y+PC++ V+LS V
Sbjct: 217 ESSSLVQYDLIGQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQV 276
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 277 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 336
Query: 460 FAAVHYFT 467
FAAV+YFT
Sbjct: 337 FAAVNYFT 344
>gi|291385736|ref|XP_002709462.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 554
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 211/316 (66%), Gaps = 9/316 (2%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
NH +EK + +N T +L++LL Y + P G G T +KT++ + S GP+S+++
Sbjct: 37 NHKEEK-----LCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVE 90
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y+MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNK
Sbjct: 91 MEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNK 150
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
L RI ++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G
Sbjct: 151 LFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEK 210
Query: 337 SF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++
Sbjct: 211 SVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMT 270
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 271 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 330
Query: 454 IATILEFAAVHYFTKL 469
+ ++EFAAV+YFT +
Sbjct: 331 FSALIEFAAVNYFTNI 346
>gi|34452723|ref|NP_000800.2| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor [Homo sapiens]
gi|114594937|ref|XP_526774.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Pan troglodytes]
gi|206729865|sp|P48169.2|GBRA4_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|23272311|gb|AAH35055.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|119613435|gb|EAW93029.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|123981552|gb|ABM82605.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|123996377|gb|ABM85790.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|157928220|gb|ABW03406.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|193786905|dbj|BAG52228.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|397490151|ref|XP_003816071.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan paniscus]
Length = 554
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|324021688|ref|NP_001191195.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 2 [Homo
sapiens]
gi|332819944|ref|XP_003310456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan troglodytes]
Length = 535
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|449500682|ref|XP_004174868.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Taeniopygia guttata]
Length = 554
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 209/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
KK + + +N T +LN+LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 37 KKEEKLWPENFTNILNSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 95
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 96 VFFRQTWVDKRLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMR 155
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 156 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPE 215
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 216 ESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQV 275
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 276 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 335
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 336 FAAVNYFTNI 345
>gi|363733739|ref|XP_003641288.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Gallus gallus]
Length = 536
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ KK + + +N T +LN+LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QSKKEEKLWPENFTSILNSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWVDKRLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PEESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|449273442|gb|EMC82936.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Columba livia]
Length = 554
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K+ + + +N T +LN+LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 35 QSKREEKLWPENFTSILNSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 93
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 94 MDVFFRQTWVDKRLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRI 153
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 154 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 213
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 214 PEESSSLVQYDLLGHTVSTETIKSITGEYVVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 273
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 274 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 333
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 334 IEFAAVNYFTNI 345
>gi|410957682|ref|XP_003985454.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Felis catus]
Length = 554
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|397490153|ref|XP_003816072.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Pan paniscus]
Length = 535
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|426231661|ref|XP_004009857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Ovis aries]
Length = 536
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNV 327
>gi|143811394|sp|P20237.2|GBRA4_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|115305322|gb|AAI23425.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Bos taurus]
gi|440908384|gb|ELR58405.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Bos grunniens
mutus]
Length = 555
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNV 346
>gi|410957684|ref|XP_003985455.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Felis catus]
Length = 535
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 136 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 195
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 196 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 255
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 256 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 315
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 316 IEFAAVNYFTNI 327
>gi|395542829|ref|XP_003773327.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Sarcophilus harrisii]
Length = 556
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 209/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
KK + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 38 KKEEKLRPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 96
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 97 VFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMR 156
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 157 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPK 216
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 217 ESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQV 276
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 277 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 336
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 337 FAAVNYFTNV 346
>gi|33468895|ref|NP_034381.1| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Mus
musculus]
gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|12851205|dbj|BAB28975.1| unnamed protein product [Mus musculus]
gi|26335917|dbj|BAC31659.1| unnamed protein product [Mus musculus]
gi|63101340|gb|AAH94603.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Mus
musculus]
gi|148705864|gb|EDL37811.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_b [Mus musculus]
Length = 552
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|327260699|ref|XP_003215171.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Anolis carolinensis]
Length = 614
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 204/302 (67%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+NI+ +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 177 ENISRILDKLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWV 235
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 236 DERLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 295
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S +P + S Q+
Sbjct: 296 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEIPQESSSLLQY 355
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 356 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 415
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 416 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 475
Query: 468 KL 469
L
Sbjct: 476 NL 477
>gi|335293404|ref|XP_003356954.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Sus scrofa]
Length = 554
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 208/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
+K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 38 QKEEKLCPENFTRILDGLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 96
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 97 VFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMR 156
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 157 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPK 216
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 217 ESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQV 276
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 277 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 336
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 337 FAAVNYFTNI 346
>gi|126331781|ref|XP_001372368.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Monodelphis domestica]
Length = 555
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 211/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 DPQKEEKLRPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D + + T K GE+ ++ V+F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVHFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNV 346
>gi|74200707|dbj|BAE24741.1| unnamed protein product [Mus musculus]
Length = 547
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPRSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|94400793|ref|NP_542154.3| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Rattus
norvegicus]
gi|120763|sp|P28471.1|GBRA4_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|204210|gb|AAC42032.1| GABA-A receptor alpha-4 subunit [Rattus norvegicus]
gi|236012|gb|AAB19902.1| GABAA receptor alpha 4 subunit [Rattus sp.]
gi|149035301|gb|EDL90005.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Rattus
norvegicus]
Length = 552
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|148705863|gb|EDL37810.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_a [Mus musculus]
Length = 603
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 87 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 145
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 146 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 205
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 206 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 265
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 266 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 325
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 326 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 385
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 386 IEFAAVNYFTNI 397
>gi|335293406|ref|XP_003356955.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Sus scrofa]
Length = 535
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 208/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
+K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 19 QKEEKLCPENFTRILDGLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 77
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 78 VFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMR 137
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 138 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPK 197
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 198 ESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQV 257
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 258 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 317
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 318 FAAVNYFTNI 327
>gi|327281247|ref|XP_003225360.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like,
partial [Anolis carolinensis]
Length = 377
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 208/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
KK + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 37 KKEEKLRPENFTRILDRLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 95
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 96 VFFRQTWVDKRLRYDGPIEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMR 155
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VP- 340
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 156 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPQHSVEVPE 215
Query: 341 -GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
++ Q+D + T K GE+ ++ V+F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 216 ESSSLVQYDLLGHTASTDTVKSITGEYIVMTVHFHLRRKMGYFMIQTYIPCIMTVILSQV 275
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 276 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 335
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 336 FAAVNYFTNI 345
>gi|297673418|ref|XP_002814765.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Pongo abelii]
Length = 554
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GP L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPXEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|395542831|ref|XP_003773328.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Sarcophilus harrisii]
Length = 537
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 209/310 (67%), Gaps = 4/310 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
KK + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+MD
Sbjct: 19 KKEEKLRPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMD 77
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI +
Sbjct: 78 VFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMR 137
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPG 341
+G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S VP
Sbjct: 138 NGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPK 197
Query: 342 MAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
+ S Q+D + + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS V
Sbjct: 198 ESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQV 257
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++E
Sbjct: 258 SFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIE 317
Query: 460 FAAVHYFTKL 469
FAAV+YFT +
Sbjct: 318 FAAVNYFTNV 327
>gi|905393|gb|AAB52519.1| GABAA receptor subunit alpha4 [Homo sapiens]
Length = 554
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV Y TA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYLTAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|348528651|ref|XP_003451830.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oreochromis niloticus]
Length = 556
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 208/310 (67%), Gaps = 4/310 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 37 QTRKDERIYPENFTRILDRLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 95
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PN+L RI
Sbjct: 96 MDVFFRQMWVDRRLMYEGPIEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRI 155
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISF 338
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT P S+
Sbjct: 156 MKNGTILYTMRLTISAECPMKLVDFPMDAHACPLKFGSYAYPKTEMIYTWTKGPEHSVEV 215
Query: 339 VP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P ++ Q+D I + T K GE+ ++ V F+LKR GYF+IQ Y+PC++ V+LS
Sbjct: 216 PPESSSLVQYDLIGQTVSSETIKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILS 275
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 276 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 335
Query: 458 LEFAAVHYFT 467
+EFAAV+YFT
Sbjct: 336 IEFAAVNYFT 345
>gi|1836080|gb|AAB46866.1| gamma-aminobutyric acid A receptor alpha 4 subunit, GABAA receptor
alpha subunit [human, fetal brain, Peptide, 554 aa]
Length = 554
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 210/312 (67%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++++Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEVEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CP+ GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPVKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|354491376|ref|XP_003507831.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4,
partial [Cricetulus griseus]
Length = 378
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNAKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 334
Query: 458 LEFAAVHYFTKL 469
+EFAAV+YFT +
Sbjct: 335 IEFAAVNYFTNI 346
>gi|1149457|emb|CAA64068.1| neurotransmitter receptor subunit [Carassius auratus]
gi|1589638|prf||2211380B GABA type A receptor:SUBUNIT=alpha6
Length = 438
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 202/301 (67%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 30 NITRILDRLLDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWID 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MR
Sbjct: 89 DRLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFD 348
LTI A CPM L NFPMD SCPL GSYAYP+ ++VY W G S VP + S Q+D
Sbjct: 149 LTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVEVPQESSSLLQYD 208
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K GE+ ++ V F+L+R G+F+IQ Y+PC++ V+L+ VSFWI +E+
Sbjct: 209 LIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESV 268
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF+
Sbjct: 269 PARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFST 328
Query: 469 L 469
L
Sbjct: 329 L 329
>gi|326677934|ref|XP_002667403.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Danio
rerio]
Length = 442
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 202/301 (67%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 30 NITRILDRLLDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWID 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MR
Sbjct: 89 DRLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFD 348
LTI A CPM L NFPMD SCPL GSYAYP+ ++VY W G S VP + S Q+D
Sbjct: 149 LTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVEVPQESSSLLQYD 208
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K GE+ ++ V F+L+R G+F+IQ Y+PC++ V+L+ VSFWI +E+
Sbjct: 209 LIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESV 268
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF+
Sbjct: 269 PARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFST 328
Query: 469 L 469
L
Sbjct: 329 L 329
>gi|296486583|tpg|DAA28696.1| TPA: gamma-aminobutyric acid receptor subunit alpha-4 [Bos taurus]
Length = 555
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 210/313 (67%), Gaps = 5/313 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRT-DLPKVRYATALDWFLLMSFFYCIAT 456
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARPISLPKVSYATAMDWFIAVCFAFVFSA 334
Query: 457 ILEFAAVHYFTKL 469
++EFAAV+YFT +
Sbjct: 335 LIEFAAVNYFTNV 347
>gi|27806985|ref|NP_776968.1| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Bos
taurus]
gi|361|emb|CAA43696.1| GABA-A bovine alpha4 subunit [Bos taurus]
Length = 556
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 210/313 (67%), Gaps = 5/313 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRT-DLPKVRYATALDWFLLMSFFYCIAT 456
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + +
Sbjct: 275 QVSFWINKESVPARTVFGITTVLTMTTLSISARPISLPKVSYATAMDWFIAVCFAFVFSA 334
Query: 457 ILEFAAVHYFTKL 469
++EFAAV+YFT +
Sbjct: 335 LIEFAAVNYFTNV 347
>gi|47211172|emb|CAF91158.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 207/310 (66%), Gaps = 4/310 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 2 QTKSDERIYPENFTHILDQLLDGYDNRLRPGFG-GRVTEVKTDIYVTSFGPVSDVEMEYT 60
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GP+ L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 61 MDVFFRQTWVDRRLMYEGPVEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRI 120
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISF 338
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT P S+
Sbjct: 121 MKNGTILYTMRLTISAECPMKLVDFPMDRHACPLKFGSYAYPKTEMIYTWTKGPQHSVEV 180
Query: 339 VP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P ++ Q+D I + T + GE+ ++ V F+LKR GYF+IQ Y+PC++ V+LS
Sbjct: 181 PPESSSLVQYDLIGQTVSSETIQSITGEYVVMTVYFHLKRKIGYFLIQTYIPCIMTVILS 240
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 241 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 300
Query: 458 LEFAAVHYFT 467
+EFAAV+YFT
Sbjct: 301 IEFAAVNYFT 310
>gi|242021132|ref|XP_002431000.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
gi|212516224|gb|EEB18262.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
Length = 570
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 202/303 (66%), Gaps = 6/303 (1%)
Query: 168 MIGKNITLVLNNLL--KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYF 225
++ N+T L+ LL K Y P +G G P I N I+SMGP+S+ D + +DCYF
Sbjct: 25 LVSSNVTETLDFLLGSKRYDKRLRPGYG-GPPITISVNFFIKSMGPVSDNDESFGLDCYF 83
Query: 226 RQYWRDSRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQD 283
RQ+W D RL + + ++ S+S L+++W+PDTY +NGK+SY+H ITVPNK LR+ D
Sbjct: 84 RQHWYDWRLQYQKIPGLDEFSMSWLFLDRVWKPDTYFVNGKKSYLHRITVPNKFLRLRHD 143
Query: 284 GDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMA 343
G I YSMRLTI A+CPM LR FP+D Q CPL+LGSY Y + L+Y WT +I G+
Sbjct: 144 GFITYSMRLTISASCPMYLRKFPLDLQKCPLVLGSYGYTDKDLIYKWTDEDAIGMQEGVE 203
Query: 344 ISQFDFISSPKRNFTFKRREG-EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFW 402
I+QFD ++ + T + G +S ++ +F LKRH GYF++QVY+PC LIVV SW+SFW
Sbjct: 204 IAQFDLVNVTTQKSTTMVKGGLPYSTIKADFWLKRHTGYFMLQVYIPCGLIVVCSWISFW 263
Query: 403 IHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAA 462
I +A R+ LG+TTVL+L+T+ R+ +PKV Y TALDWF+++ F + ++E+A
Sbjct: 264 IDPDAVPARVNLGVTTVLSLTTLGFGGRSQMPKVSYWTALDWFVIICFTSVFSVMIEYAI 323
Query: 463 VHY 465
V+Y
Sbjct: 324 VNY 326
>gi|410913345|ref|XP_003970149.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Takifugu rubripes]
Length = 556
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/319 (44%), Positives = 209/319 (65%), Gaps = 4/319 (1%)
Query: 152 LPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP 211
+P + + K + + +N T +L+ LL Y S P G G T +KT++ + S GP
Sbjct: 28 IPSIKKISGQTKTDERIYPENFTRILDQLLDGYDSRLRPGFG-GPVTEVKTDIYVTSFGP 86
Query: 212 ISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
+S+++M+Y+MD +FRQ W D RL + G + L L+ M+ K+W PDT+ NGK+S H +
Sbjct: 87 VSDVEMEYTMDVFFRQTWVDRRLMYEGQVEILRLNNLMVTKVWTPDTFFRNGKKSVAHNM 146
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
T PNKL RI ++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT
Sbjct: 147 TAPNKLFRIMKNGTILYTMRLTISAECPMKLVDFPMDGHACPLKFGSYAYPKSEMIYTWT 206
Query: 332 --PGKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYV 388
P S+ P ++ Q+D I + T + GE+ ++ V F+LKR GYF+IQ Y+
Sbjct: 207 KGPQHSVEVPPESSSLVQYDLIGQTVSSETIQSITGEYVVMTVYFHLKRKLGYFLIQTYI 266
Query: 389 PCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLM 448
PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ +
Sbjct: 267 PCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAV 326
Query: 449 SFFYCIATILEFAAVHYFT 467
F + + ++EFAAV+YFT
Sbjct: 327 CFAFVFSALIEFAAVNYFT 345
>gi|432880405|ref|XP_004073681.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oryzias latipes]
Length = 570
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 206/310 (66%), Gaps = 4/310 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + +N T +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 37 QTRKDEKTNPENFTRILDRLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 95
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GP+ L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 96 MDVFFRQMWIDRRLMYEGPMEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRI 155
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISF 338
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT P S+
Sbjct: 156 MKNGTILYTMRLTIIAQCPMKLVDFPMDAHACPLKFGSYAYPKTEMIYTWTKGPEHSVEV 215
Query: 339 VP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P ++ Q+D + T K GE+ ++ V F+LKR GYF+IQ Y+PC++ V+LS
Sbjct: 216 PPESSSLVQYDLTGQTVSSETIKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILS 275
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATI 457
VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + +
Sbjct: 276 QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL 335
Query: 458 LEFAAVHYFT 467
+EFAAV+YFT
Sbjct: 336 IEFAAVNYFT 345
>gi|326928336|ref|XP_003210336.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Meleagris gallopavo]
Length = 453
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/302 (47%), Positives = 198/302 (65%), Gaps = 17/302 (5%)
Query: 185 QSSEPPNHG--------------KGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+S +PP+ G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 17 KSPQPPDRGPAPLRSASNSSLCPAGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 76
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 77 DERLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 136
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 137 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQY 196
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 197 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 256
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 257 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 316
Query: 468 KL 469
L
Sbjct: 317 NL 318
>gi|301628162|ref|XP_002943228.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Xenopus (Silurana) tropicalis]
Length = 455
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 199/302 (65%), Gaps = 4/302 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+NIT +L+ LL Y + P+ G G T +KT++ + S GP+S++DM+Y+MD +FRQ W
Sbjct: 30 ENITRILDRLLDGYDNRLRPSFG-GPVTEVKTDIYVTSFGPVSDVDMEYTMDIFFRQTWV 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G +LY+M
Sbjct: 89 DERLKFDGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTVLYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTIKA CPM L NFPMD +CPL GSYAYP ++VY W G S VP + S Q+
Sbjct: 149 RLTIKAECPMRLMNFPMDGHACPLKFGSYAYPKSEIVYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + + T GE+SL V F L+R GY++I Y+PC + VVLS V FWI++E+
Sbjct: 209 DLVGQKVSSETLLSNTGEYSLQVVMFFLQRKIGYYIIHTYIPCSMTVVLSQVVFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R PKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 269 VPARTVAGITTVLTMTTLSISARHSFPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328
Query: 468 KL 469
L
Sbjct: 329 NL 330
>gi|74145870|dbj|BAE24201.1| unnamed protein product [Mus musculus]
Length = 578
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 209/337 (62%), Gaps = 28/337 (8%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGK-------------------------G 195
+ K + + +N T +L++LL Y + P G G
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFGGTDCFKTCKCALSVRLWSACLFVEILG 95
Query: 196 EPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWR 255
T +KT++ + S GP+S+++M+Y+MD +FRQ W D RL + GPI L L+ M+ K+W
Sbjct: 96 PVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWT 155
Query: 256 PDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLI 315
PDT+ NGK+S H +T PNKL RI ++G ILY+MRLTI A CPM L +FPMD +CPL
Sbjct: 156 PDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLK 215
Query: 316 LGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVN 372
GSYAYP +++Y WT G S VP + S Q+D I + T K GE+ ++ V
Sbjct: 216 FGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVY 275
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GYF+IQ Y+PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R
Sbjct: 276 FHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHS 335
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
LPKV YATA+DWF+ + F + + ++EFAAV+YFT +
Sbjct: 336 LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 372
>gi|312191380|gb|ADQ43744.1| gamma-aminobutyric acid A receptor subunit alpha-6 [Xenopus laevis]
Length = 341
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 194/292 (66%), Gaps = 4/292 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPI 240
L Y + P+ G G T +KT++ + S GP+S++DM+Y+MD +FRQ W D RL F GP
Sbjct: 1 LDGYDNRLRPSFG-GPVTEVKTDIYVTSFGPVSDVDMEYTMDIFFRQTWIDERLKFDGPT 59
Query: 241 NNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPM 300
L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G +LY+MRLTIKA CPM
Sbjct: 60 EILRLNNLMVNKIWTPDTFFRNGKKSISHNMTTPNKLFRIMQNGTVLYTMRLTIKAECPM 119
Query: 301 SLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFDFISSPKRNF 357
L NFPMD +CPL GSYAYP ++VY W G S VP + S Q+D + +
Sbjct: 120 RLMNFPMDGHACPLKFGSYAYPKSEIVYTWKKGPLYSVEVPEESSSLLQYDLVGQKVSSE 179
Query: 358 TFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGIT 417
T GE+ ++ V+F L+R GYFVIQ Y+PC++ V+L VSFWI++E+ R GIT
Sbjct: 180 TLLSNTGEYVVMTVHFYLQRKMGYFVIQTYIPCIMTVILYQVSFWINKESVPARTVFGIT 239
Query: 418 TVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
TVLT++T+S+ +R PKV YATA+DWF+ + F + + ++EFAAV+YFT L
Sbjct: 240 TVLTMTTLSISARHSFPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 291
>gi|332218628|ref|XP_003258456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Nomascus leucogenys]
Length = 558
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 209/316 (66%), Gaps = 8/316 (2%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSM----RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
++G IL++ RLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G
Sbjct: 155 MRNGMILFNCIFHHRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEK 214
Query: 337 SF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++
Sbjct: 215 SVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMT 274
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 275 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 334
Query: 454 IATILEFAAVHYFTKL 469
+ ++EFAAV+YFT +
Sbjct: 335 FSALIEFAAVNYFTNI 350
>gi|441663565|ref|XP_004091687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Nomascus leucogenys]
Length = 539
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 209/316 (66%), Gaps = 8/316 (2%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ +K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 17 QNQKEEKLCTENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 75
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 76 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 135
Query: 281 NQDGDILYSM----RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
++G IL++ RLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G
Sbjct: 136 MRNGMILFNCIFHHRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEK 195
Query: 337 SF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S VP + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++
Sbjct: 196 SVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMT 255
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 256 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 315
Query: 454 IATILEFAAVHYFTKL 469
+ ++EFAAV+YFT +
Sbjct: 316 FSALIEFAAVNYFTNI 331
>gi|348575241|ref|XP_003473398.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
isoform 2 [Cavia porcellus]
Length = 443
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 208/325 (64%), Gaps = 14/325 (4%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W + ++ N L + + +N++ +L+NLL+ Y + P G G T +KT++ +
Sbjct: 7 WLYIILRLENSLAQLENEGNFYSENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVT 65
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S GP+S+++M W D RL F+GP LSL+ M+ KIW PDT+ NGK+S
Sbjct: 66 SFGPVSDVEMT----------WTDERLKFVGPTEILSLNNLMVSKIWTPDTFFRNGKKSI 115
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++
Sbjct: 116 AHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEII 175
Query: 328 YHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y W G S VP + S Q+D I + T K GE+ ++ V+F+L+R GYF+I
Sbjct: 176 YTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVHFHLQRKMGYFMI 235
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q+Y PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 236 QIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDW 295
Query: 445 FLLMSFFYCIATILEFAAVHYFTKL 469
F+ + F + + ++EFAAV+YFT L
Sbjct: 296 FIAVCFAFVFSALIEFAAVNYFTNL 320
>gi|326919232|ref|XP_003205886.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Meleagris gallopavo]
Length = 555
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 193/279 (69%), Gaps = 3/279 (1%)
Query: 194 KGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKI 253
+G T +KT++ + S GP+S+++M+Y+MD +FRQ W D RL + GPI L L+ M+ K+
Sbjct: 68 EGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLNNLMVSKV 127
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W PDT+ NGK+S H +T PNKL RI ++G ILY+MRLTI A CPM L +FPMD +CP
Sbjct: 128 WTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACP 187
Query: 314 LILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQ 370
L GSYAYP +++Y WT G S VP + S Q+D + + T K GE+ ++
Sbjct: 188 LKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQYDLLGHTVSSETIKSITGEYIVMT 247
Query: 371 VNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSR 430
V F+L+R GYF+IQ Y+PC++ V+LS VSFWI++E+ R GITTVLT++T+S+ +R
Sbjct: 248 VYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISAR 307
Query: 431 TDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
LPKV YATA+DWF+ + F + + ++EFAAV+YFT +
Sbjct: 308 HSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
>gi|348535496|ref|XP_003455236.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Oreochromis niloticus]
Length = 440
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/301 (46%), Positives = 201/301 (66%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D
Sbjct: 30 NITRILDRLLDGYDNRLRPGSGGGV-TEVKTDIFVTSFGPVSDVEMEYTMDMFFRQMWVD 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GP L L+ M++KIW PDT+ N K+S H +T PNKL RI Q+G +LY+MR
Sbjct: 89 ERLKFEGPTEILRLNNLMVDKIWTPDTFFRNSKKSISHNMTTPNKLFRIMQNGTVLYTMR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VP--GMAISQFD 348
LTI A CPMSL +FPMD SCPL GSYAY ++++ W G S P M++ Q+D
Sbjct: 149 LTISAECPMSLMDFPMDGHSCPLRFGSYAYTSSEIIFTWRKGPINSVDCPKESMSLLQYD 208
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ + FK G +S+ V+F+L+R GY++IQ Y+P +++VVLS VSFWI++E+
Sbjct: 209 LVGQTLSSEIFKSNTGHYSVQVVHFHLQRKLGYYLIQTYIPLIMVVVLSQVSFWINKESV 268
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF
Sbjct: 269 PARTVAGITTVLTMTTLSISARQSLPKVAYATAMDWFIAVCFAFVASALVEFAAVNYFAT 328
Query: 469 L 469
L
Sbjct: 329 L 329
>gi|432879772|ref|XP_004073540.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oryzias latipes]
Length = 444
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 200/301 (66%), Gaps = 4/301 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S++ M+Y+MD +FRQ W D
Sbjct: 30 NITRILDRLLDGYDNRLRPGSGGG-ITEVKTDIFVTSFGPVSDVKMEYTMDMFFRQMWVD 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GP L L+ +M++KIW PDT+ N K+S H +T PNKL RI Q+G +LY+MR
Sbjct: 89 ERLKFEGPTEILRLNNRMVDKIWTPDTFFRNSKKSISHNMTTPNKLFRIMQNGTVLYTMR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VP--GMAISQFD 348
LTI A CPM L +FPMD +CPL GSYAY ++++ W G + S P M++ Q+D
Sbjct: 149 LTISAECPMRLMDFPMDGHACPLRFGSYAYTSSEIIFTWRKGLTASVECPKESMSLLQYD 208
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ + K G++S+ V F+L+R GY++IQ Y+P +++VVLS VSFWI++E+
Sbjct: 209 LVGQTLSSEMIKLNTGQYSVQVVYFHLQRKLGYYLIQTYIPLIMVVVLSQVSFWINKESV 268
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF
Sbjct: 269 PARTVAGITTVLTMTTLSISARQSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNYFAT 328
Query: 469 L 469
L
Sbjct: 329 L 329
>gi|348528649|ref|XP_003451829.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oreochromis niloticus]
Length = 455
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 203/303 (66%), Gaps = 7/303 (2%)
Query: 172 NITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NITL +L++LL Y + P G T +KTN+ + S GP+S+ DM+Y++D +FRQ
Sbjct: 38 NITLFTRILDSLLDGYDNRLRPGLGD-RVTEVKTNIYVTSFGPVSDTDMEYTIDVFFRQS 96
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY
Sbjct: 97 WKDERLKFHGPMNILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLY 156
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAIS 345
+MRLT+ A CPM L +FPMD+ SCPL GSYAY I ++ Y WT S S V ++
Sbjct: 157 TMRLTVHAECPMHLEDFPMDSHSCPLKFGSYAYTISEVTYAWTRNASESVVVEGESSRLN 216
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
Q+D + T K GE++++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++R
Sbjct: 217 QYDLLGQTVGQETIKSSTGEYTVMTAEFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR 276
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+Y
Sbjct: 277 ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
Query: 466 FTK 468
FTK
Sbjct: 337 FTK 339
>gi|120758|sp|P23576.1|GBRA2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
Length = 451
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 211/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNSMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT P
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNP 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|5813763|gb|AAD52001.1| GABAA receptor alpha 6 subunit [Mus musculus]
Length = 442
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 14/302 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 29 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------WT 77
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 78 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 137
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 138 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 197
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 198 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 257
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 258 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 317
Query: 468 KL 469
L
Sbjct: 318 NL 319
>gi|149052306|gb|EDM04123.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_b [Rattus norvegicus]
Length = 443
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 14/302 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------WT 78
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 79 DERLKFKGPAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTM 138
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 139 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 198
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 199 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 258
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 259 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 318
Query: 468 KL 469
L
Sbjct: 319 NL 320
>gi|354495032|ref|XP_003509636.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Cricetulus griseus]
Length = 443
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 14/302 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------WT 78
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 79 DERLKFRGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 138
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 139 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 198
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 199 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 258
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 259 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 318
Query: 468 KL 469
L
Sbjct: 319 NL 320
>gi|153791906|ref|NP_032094.2| gamma-aminobutyric acid receptor subunit alpha-6 isoform 2
precursor [Mus musculus]
Length = 443
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 14/302 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------WT 78
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 79 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 138
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 139 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 198
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 199 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 258
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 259 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 318
Query: 468 KL 469
L
Sbjct: 319 NL 320
>gi|51038|emb|CAA36244.1| precursor polypeptide (AA -17 to 426) [Mus musculus]
gi|5813765|gb|AAD52003.1| GABAA receptor alpha 6 subunit [Mus musculus]
gi|148700396|gb|EDL32343.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_b [Mus musculus]
Length = 443
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 14/302 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 30 ENVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------WT 78
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 79 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 138
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 139 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 198
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 199 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 258
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 259 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 318
Query: 468 KL 469
L
Sbjct: 319 NL 320
>gi|432880407|ref|XP_004073682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oryzias latipes]
Length = 455
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 203/303 (66%), Gaps = 7/303 (2%)
Query: 172 NITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NITL +L+ LL Y + P G T +KTN+ + S GP+S+ DM+Y++D +FRQ
Sbjct: 38 NITLFTRILDRLLDGYDNRLRPGLGD-RVTEVKTNIYVTSFGPVSDTDMEYTIDVFFRQS 96
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W+D RL+F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY
Sbjct: 97 WKDERLTFHGPMNILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLY 156
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAIS 345
+MRLT+ A CPM L +FPMD SCPL GSYAY I ++ Y WT S S V ++
Sbjct: 157 TMRLTVHAECPMHLEDFPMDFHSCPLKFGSYAYTISEVTYAWTRNASDSVVVEGESSRLN 216
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++R
Sbjct: 217 QYDLLGQTVGQETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR 276
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+Y
Sbjct: 277 ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
Query: 466 FTK 468
FTK
Sbjct: 337 FTK 339
>gi|449273443|gb|EMC82937.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Columba livia]
Length = 455
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 211/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+++ L+++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LADSLEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|224049939|ref|XP_002194342.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Taeniopygia guttata]
Length = 455
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 211/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+++ L+++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LADSLEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|443703782|gb|ELU01184.1| hypothetical protein CAPTEDRAFT_216654 [Capitella teleta]
Length = 384
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/301 (51%), Positives = 211/301 (70%), Gaps = 9/301 (2%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+L++LL+ Y P G G P I+TN+LIRSMGPISE +M +SMDCYFRQ W+D RL+
Sbjct: 13 LLDSLLEGYNKHLRPGMG-GPPLEIRTNILIRSMGPISEEEMMFSMDCYFRQEWQDPRLA 71
Query: 236 F--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
F MG ++ + SIKML+ IW+PDT+ LNG+ SY+HTIT NKL RI GDILYS RLT
Sbjct: 72 FVPMGDLDIIRPSIKMLDDIWKPDTFFLNGQDSYLHTITYSNKLFRIYNKGDILYSQRLT 131
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT----PGKSISFVPGMAISQFDF 349
IK++CPM L+ +P+D+QSCPL LGSY Y + +VY W K + G++++QF
Sbjct: 132 IKSSCPMKLQKYPLDSQSCPLFLGSYGYTRQDIVYKWQDMQDGKKPVQIHEGISMAQFRL 191
Query: 350 ISSPKRNFTFKRREGEFS--LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
N T G + +L V+F L+R GY+++Q+Y+PC LIVV+SWVSF+I+REA
Sbjct: 192 TGFEYGNKTLDENHGLGARRVLSVDFELQREIGYYLLQIYLPCYLIVVISWVSFFINREA 251
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
T R+ LGITT+LT STI+L R +PKV Y+TALD +LLM F++ A ++E+A V+YFT
Sbjct: 252 TPARVTLGITTLLTTSTIALTGREGIPKVTYSTALDIYLLMCFWFVFAALVEYAGVNYFT 311
Query: 468 K 468
K
Sbjct: 312 K 312
>gi|410913417|ref|XP_003970185.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Takifugu rubripes]
Length = 454
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 203/303 (66%), Gaps = 7/303 (2%)
Query: 172 NITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NITL +L++LL Y + P G T +KTN+ + S GP+S+ DM+Y++D +FRQ
Sbjct: 37 NITLFTRILDSLLDGYDNRLRPGLGD-RITEVKTNIYVTSFGPVSDTDMEYTIDVFFRQS 95
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY
Sbjct: 96 WKDERLKFNGPMNILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLY 155
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAIS 345
+MRLT+ A CPM L +FPMD SCPL GSYAY I ++ Y WT S S V ++
Sbjct: 156 TMRLTVHAECPMHLEDFPMDFHSCPLKFGSYAYTISEVTYSWTRNASDSVVVEGESSRLN 215
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++R
Sbjct: 216 QYDLLGQTVGQETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR 275
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+Y
Sbjct: 276 ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 335
Query: 466 FTK 468
FTK
Sbjct: 336 FTK 338
>gi|354501856|ref|XP_003513004.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Cricetulus griseus]
Length = 451
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ NF+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTANFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|326919234|ref|XP_003205887.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Meleagris gallopavo]
Length = 529
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 225/359 (62%), Gaps = 10/359 (2%)
Query: 116 LHFVSTFNVLS---MFSVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKN 172
LHF N + + V+ +G + E + R +++ L+++ K+++ I
Sbjct: 56 LHFNDCANGQAGKGILMVRPGSGSVPTAHQEERGPVLLRGSVLADSLEDEAKNNITI--- 112
Query: 173 ITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDS 232
T +L+ LL Y + P G T + TN+ + S GP+S+ DM+Y++D +FRQ W+D
Sbjct: 113 FTRILDRLLDGYDNRLRPGLGD-SITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQRWKDE 171
Query: 233 RLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRL
Sbjct: 172 RLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRL 231
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDF 349
T++A CPM L +FPMD SCPL GSYAY ++ Y WT S+ P G ++Q+D
Sbjct: 232 TVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDL 291
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 292 LGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVP 351
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 352 ARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 410
>gi|334311427|ref|XP_003339614.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Monodelphis domestica]
Length = 439
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 196/303 (64%), Gaps = 14/303 (4%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
KNI+ +L+NLL Y + P G G T +KT++ + S GP+S+++M W
Sbjct: 28 SKNISRILDNLLDGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMT----------W 76
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+
Sbjct: 77 TDERLKFRGPSKILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYT 136
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--Q 346
MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q
Sbjct: 137 MRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQ 196
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+D I + K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E
Sbjct: 197 YDLIGQTVSSEIIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 256
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YF
Sbjct: 257 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 316
Query: 467 TKL 469
T L
Sbjct: 317 TNL 319
>gi|118090558|ref|XP_001233850.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Gallus
gallus]
Length = 456
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 211/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+++ L+++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LADSLEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|189520296|ref|XP_001339511.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Danio
rerio]
Length = 453
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/298 (46%), Positives = 199/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ + T IKTN+ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-KVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFV-PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYPI ++VY WT PGKS+ G ++Q+ I
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTKGPGKSVVVAEEGSRLNQYHLI 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G+++++ +F LKR GYFVIQ Y+PC + V+LS VSFW++RE+
Sbjct: 229 GHTAGTEDISTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|209413778|ref|NP_001129251.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Rattus
norvegicus]
Length = 452
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVSTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|327260701|ref|XP_003215172.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Anolis carolinensis]
Length = 457
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ WRD R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTAVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWRDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMQVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT ++S V G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTKSEVVYEWTKEPALSVVVAEDGSRLNQYDLM 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|410920936|ref|XP_003973939.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Takifugu rubripes]
Length = 461
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 202/306 (66%), Gaps = 7/306 (2%)
Query: 169 IGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYF 225
I NIT+ +L+ LL Y + P G+ + T IKTN+ + S GP+S+ +M+Y++D +F
Sbjct: 40 INDNITIFTRILDGLLDGYDNRLRPGLGE-KVTEIKTNIFVTSFGPVSDTEMEYTIDVFF 98
Query: 226 RQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGD 285
RQ W+D RL F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+ DG
Sbjct: 99 RQSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGT 158
Query: 286 ILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGM 342
+LY+MRLTI A CPM L +FPMD +CPL GSYAYP+ ++VY WT G + S V G
Sbjct: 159 LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKGAAKSVVVAEEGS 218
Query: 343 AISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFW 402
++Q+ I G+++++ +F LKR GYFVIQ Y+PC + V+LS VSFW
Sbjct: 219 RLNQYHLIGQTAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFW 278
Query: 403 IHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAA 462
++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA
Sbjct: 279 LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFAT 338
Query: 463 VHYFTK 468
V+YFTK
Sbjct: 339 VNYFTK 344
>gi|431893824|gb|ELK03641.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Pteropus alecto]
Length = 534
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 110 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGD-SITEVFTNIYVTSFGPVSD 165
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 166 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 225
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 226 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 285
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 286 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 345
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 346 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 405
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 406 FVFSALIEFATVNYFTK 422
>gi|308461293|ref|XP_003092940.1| CRE-LGC-36 protein [Caenorhabditis remanei]
gi|308252020|gb|EFO95972.1| CRE-LGC-36 protein [Caenorhabditis remanei]
Length = 533
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 142/318 (44%), Positives = 202/318 (63%), Gaps = 18/318 (5%)
Query: 164 KHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDC 223
K + I +N+TL+LNN+LKNY P G+PT + ++ IR+MGP++++ YS +C
Sbjct: 49 KRESGIAQNVTLLLNNVLKNYDQHFRPGFKSGKPTKVYIDLFIRTMGPVADLAYTYSFNC 108
Query: 224 YFRQYWRDSRLSFMGP---INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
YFRQ W D RL F LSLS+ ML+KIW+PDTY NG SYVH IT N+L+R+
Sbjct: 109 YFRQMWTDDRLVFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTSNRLVRL 168
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--------- 331
DG ILYS R+T+KA C M + +P+D Q+C LI+GSYAY +++ Y W
Sbjct: 169 ETDGTILYSSRITVKAKCQMDMSRYPLDKQACRLIIGSYAYSSDEVQYKWRIMGEDNGVK 228
Query: 332 -PGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
+SI+ +P ++S F + N T R+ E+S L+V F RH GYF++ YVPC
Sbjct: 229 IDYESIADLPQFSLSGFKVYEAA--NLT---RDKEYSALEVRFYFDRHFGYFLMNFYVPC 283
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
L+V+L WV+F+ REAT++RIG+GIT VLT+ ISLDS++D PKV TAL+ ++ + +
Sbjct: 284 ALVVLLCWVAFFTKREATAERIGIGITNVLTIVLISLDSKSDSPKVDSPTALEVYIWICY 343
Query: 451 FYCIATILEFAAVHYFTK 468
+ ++EF VHY TK
Sbjct: 344 LTHLICMVEFTVVHYHTK 361
>gi|348513621|ref|XP_003444340.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Oreochromis niloticus]
Length = 461
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/315 (44%), Positives = 206/315 (65%), Gaps = 7/315 (2%)
Query: 160 KEKKKHDLMIGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
+E + + NIT+ +L+ LL Y + P G+ + T IKTN+ + S GP+S+ +
Sbjct: 31 QEITPKEAELNDNITIFTRILDGLLDGYDNRLRPGLGE-KVTEIKTNIFVTSFGPVSDTE 89
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L+L+ + IW PDT+ LNGK+S H +T PNK
Sbjct: 90 MEYTIDVFFRQSWKDERLCFKGPMEMLALNNLLASNIWTPDTFFLNGKKSIAHNMTTPNK 149
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
LLR+ DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP+ ++VY WT G +
Sbjct: 150 LLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYRWTEGAAD 209
Query: 337 SFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S V G ++Q+ I G+++++ +F LKR GYFVIQ Y+PC +
Sbjct: 210 SVVVAEEGSRLNQYHLIGQDAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMT 269
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 270 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 329
Query: 454 IATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 330 FSALIEFATVNYFTK 344
>gi|281338656|gb|EFB14240.1| hypothetical protein PANDA_005233 [Ailuropoda melanoleuca]
Length = 428
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 4 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 59
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 60 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 119
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 120 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 179
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 180 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 239
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 240 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 299
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 300 FVFSALIEFATVNYFTK 316
>gi|410957690|ref|XP_003985458.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Felis catus]
Length = 438
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 212/324 (65%), Gaps = 7/324 (2%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W + ++N +++ K+++ I T +L+ LL Y + P G T + TN+ +
Sbjct: 7 WKSSRLVLANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVT 62
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S GP+S+ DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S
Sbjct: 63 SFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSV 122
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T+PNKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++
Sbjct: 123 AHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVT 182
Query: 328 YHWT--PGKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y WT S+ P G ++Q+D + T K GE++++ +F+LKR GYFVI
Sbjct: 183 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 242
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 243 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 302
Query: 445 FLLMSFFYCIATILEFAAVHYFTK 468
F+ + + + + ++EFA V+YFTK
Sbjct: 303 FIAVCYAFVFSALIEFATVNYFTK 326
>gi|348571816|ref|XP_003471691.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
isoform 1 [Cavia porcellus]
Length = 451
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|348571818|ref|XP_003471692.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
isoform 2 [Cavia porcellus]
Length = 452
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|395843743|ref|XP_003794633.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Otolemur garnettii]
Length = 451
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQRWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVEVAPDGSRLNQYDLLGQSVGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|403284717|ref|XP_003933704.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 511
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDS-ITEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|149703013|ref|XP_001496146.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Equus
caballus]
Length = 451
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|62088170|dbj|BAD92532.1| gamma-aminobutyric acid A receptor, alpha 2 precursor variant [Homo
sapiens]
Length = 461
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 37 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 92
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 93 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 152
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 153 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 212
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 213 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 272
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 273 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 332
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 333 FVFSALIEFATVNYFTK 349
>gi|441663576|ref|XP_004091688.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Nomascus leucogenys]
Length = 511
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|301763288|ref|XP_002917061.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Ailuropoda melanoleuca]
Length = 451
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|426231655|ref|XP_004009854.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Ovis
aries]
Length = 451
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|55727657|emb|CAH90582.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|204204|gb|AAC42030.1| GABA-A receptor alpha-2 subunit [Rattus norvegicus]
Length = 432
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 8 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 63
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 64 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 123
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 124 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 183
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 184 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 243
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 244 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 303
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 304 FVFSALIEFATVNYFTK 320
>gi|386422|gb|AAB27278.1| gamma-aminobutyric acidA receptor alpha 2 subunit [Homo sapiens]
Length = 451
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|332819978|ref|XP_003310465.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Pan troglodytes]
gi|397490165|ref|XP_003816078.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Pan paniscus]
gi|119613429|gb|EAW93023.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_b
[Homo sapiens]
Length = 367
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGD-SITEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|332218620|ref|XP_003258452.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Nomascus leucogenys]
Length = 367
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGD-SITEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|18490288|gb|AAH22488.1| GABRA2 protein [Homo sapiens]
gi|325463907|gb|ADZ15724.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2 [synthetic
construct]
Length = 367
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGD-SITEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSAAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|345779584|ref|XP_858923.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Canis lupus familiaris]
Length = 442
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 18 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 73
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 74 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 133
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 134 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 193
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 194 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 253
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 254 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 313
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 314 FVFSALIEFATVNYFTK 330
>gi|335293402|ref|XP_003356953.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Sus scrofa]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|332218614|ref|XP_003258449.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Nomascus leucogenys]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|348518922|ref|XP_003446980.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Oreochromis niloticus]
Length = 461
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 213/318 (66%), Gaps = 7/318 (2%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
N + +++K + + T +L++LL Y + P G+ T +KT++ + S+GP+S+ D
Sbjct: 31 NGMTDQQKDNTTV---FTKILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHD 86
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNK
Sbjct: 87 MEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNK 146
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
LLRI ++G +LY+MRLT++A CPM L +FPMD +CPL GSYAY ++VY WT G +
Sbjct: 147 LLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQ 206
Query: 337 SFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S V G ++Q+D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++
Sbjct: 207 SVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMT 266
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 267 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 326
Query: 454 IATILEFAAVHYFTKLCY 471
+ ++EFA V+YFTK Y
Sbjct: 327 FSALIEFATVNYFTKRGY 344
>gi|344279193|ref|XP_003411375.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Loxodonta africana]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|291385732|ref|XP_002709460.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 2
precursor-like [Oryctolagus cuniculus]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 209/317 (65%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSVSAVF-TNIYVTSYGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|403284715|ref|XP_003933703.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|387762508|ref|NP_001248597.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|402869280|ref|XP_003898691.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Papio anubis]
gi|402869282|ref|XP_003898692.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Papio anubis]
gi|209572895|sp|Q5RCC5.2|GBRA2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|355687258|gb|EHH25842.1| GABA(A) receptor subunit alpha-2 [Macaca mulatta]
gi|355758702|gb|EHH61508.1| GABA(A) receptor subunit alpha-2 [Macaca fascicularis]
gi|380811390|gb|AFE77570.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811392|gb|AFE77571.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811394|gb|AFE77572.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|402869284|ref|XP_003898693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Papio anubis]
Length = 511
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|197100628|ref|NP_001126829.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Pongo
abelii]
gi|55732783|emb|CAH93089.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 209/317 (65%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTARFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|167000751|ref|NP_000798.2| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|167000817|ref|NP_001107647.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|332819972|ref|XP_003310463.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan troglodytes]
gi|397490161|ref|XP_003816076.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan paniscus]
gi|426344236|ref|XP_004038680.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Gorilla gorilla gorilla]
gi|126302547|sp|P47869.2|GBRA2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|119613428|gb|EAW93022.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613430|gb|EAW93024.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613431|gb|EAW93025.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|158260347|dbj|BAF82351.1| unnamed protein product [Homo sapiens]
gi|168277582|dbj|BAG10769.1| gamma-aminobutyric-acid receptor subunit alpha-2 precursor
[synthetic construct]
gi|193785006|dbj|BAG54159.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|410906149|ref|XP_003966554.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Takifugu rubripes]
Length = 436
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T IKTN+ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 24 TRILDGLLDGYDNRLRPGLGENV-TEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDER 82
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 83 LCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 142
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP+ ++VY WT G + S V G ++Q+ I
Sbjct: 143 ISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTTGAAKSVVVAEDGSRLNQYHLI 202
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G+++++ +F LKR GYFVIQ Y+PC + V+LS VSFW++RE+
Sbjct: 203 GQTAGTEDIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPA 262
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 263 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 320
>gi|6679901|ref|NP_032092.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Mus
musculus]
gi|120757|sp|P26048.1|GBRA2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|193389|gb|AAA37650.1| GABA-A receptor alpha-2 subunit [Mus musculus]
gi|26333011|dbj|BAC30223.1| unnamed protein product [Mus musculus]
gi|92110217|gb|AAI15728.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
gi|148705860|gb|EDL37807.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
Length = 451
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|432949769|ref|XP_004084249.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Oryzias latipes]
Length = 461
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 213/318 (66%), Gaps = 7/318 (2%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
N + +++K + + T +L++LL Y + P G+ T +KT++ + S+GP+S+ D
Sbjct: 31 NGMTDEQKDNTTV---FTKILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHD 86
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNK
Sbjct: 87 MEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNK 146
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
LLRI ++G +LY+MRLT++A CPM L +FPMD +CPL GSYAY ++VY WT G +
Sbjct: 147 LLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQ 206
Query: 337 SFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S V G ++Q+D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++
Sbjct: 207 SVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMT 266
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 267 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 326
Query: 454 IATILEFAAVHYFTKLCY 471
+ ++EFA V+YFTK Y
Sbjct: 327 FSALIEFATVNYFTKRGY 344
>gi|126331783|ref|XP_001372457.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Monodelphis domestica]
Length = 454
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+++ +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LADPQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQTIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|395542841|ref|XP_003773333.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Sarcophilus harrisii]
Length = 454
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 210/317 (66%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
+++ +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LADPQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQTIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|47217918|emb|CAG06524.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T IKTN+ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 9 TRILDGLLDGYDNRLRPGLGENV-TEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDER 67
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 68 LCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 127
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP+ ++VY WT G + S V G ++Q+ I
Sbjct: 128 ISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKGAAKSVVVAEDGSRLNQYHLI 187
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G+++++ +F LKR GYFVIQ Y+PC + V+LS VSFW++RE+
Sbjct: 188 GQTAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPA 247
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 248 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 305
>gi|116268041|ref|NP_001070794.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Danio
rerio]
gi|115528099|gb|AAI24698.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Danio rerio]
gi|182889028|gb|AAI64540.1| Gabra1 protein [Danio rerio]
Length = 459
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 217/327 (66%), Gaps = 8/327 (2%)
Query: 149 TNRLP-KVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
TN L K S+ +++K + + T +L++LL Y + P G+ T +KT++ +
Sbjct: 20 TNALAGKSSSQNADEQKDNTTV---FTRILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVT 75
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S+GP+S+ DM+Y++D +FRQ W+D RL F GP+ L L+ M KIW PDT+ NGK+S
Sbjct: 76 SIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSV 135
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
H +T+PNKLLRI ++G +LY+MRLT++A CPM L +FPMD +CPL GSYAY ++V
Sbjct: 136 AHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVV 195
Query: 328 YHWTPGKSISFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
Y WT G + S V G ++Q+D + + + GE+ ++ +F+LKR GYFVI
Sbjct: 196 YVWTRGAAQSVVVADDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVI 255
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DW
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 445 FLLMSFFYCIATILEFAAVHYFTKLCY 471
F+ + + + + ++EFA V+YFTK Y
Sbjct: 316 FIAVCYAFVFSALIEFATVNYFTKRGY 342
>gi|190402682|gb|ACE77814.1| gamma-aminobutyric acid A receptor alpha 1 [Felis catus]
Length = 401
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 16 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 74
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 75 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 134
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 135 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 194
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 195 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 254
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 255 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 314
Query: 471 Y 471
Y
Sbjct: 315 Y 315
>gi|432850188|ref|XP_004066746.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Oryzias latipes]
Length = 467
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T IKTN+ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 55 TRILDGLLDGYDNRLRPGLGENV-TEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDER 113
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 114 LCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 173
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP+E++VY WT + S V G ++Q+ I
Sbjct: 174 ISAECPMQLEDFPMDAHACPLKFGSYAYPVEEVVYTWTQDAAKSVVVAEDGSRLNQYHLI 233
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G+++++ +F LKR GYFVIQ Y+PC + V+LS VSFW++RE+
Sbjct: 234 GQTAGTEDIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPA 293
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 294 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 351
>gi|226135|prf||1411303A GABA receptor alpha2
Length = 452
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 209/317 (65%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|188484479|gb|ACD50863.1| gamma-aminobutyric acid A receptor alpha 2 [Felis catus]
Length = 411
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/298 (46%), Positives = 199/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T + TN+ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 5 TRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDER 63
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRLT
Sbjct: 64 LKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 123
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD SCPL GSYAY ++ Y WT S+ P G ++Q+D +
Sbjct: 124 VQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLL 183
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 184 GQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 243
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 244 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 301
>gi|449267233|gb|EMC78199.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Columba livia]
Length = 455
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|224068169|ref|XP_002193432.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Taeniopygia guttata]
gi|449475088|ref|XP_004175463.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Taeniopygia guttata]
Length = 455
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|27806981|ref|NP_776966.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Bos
taurus]
gi|120756|sp|P10063.1|GBRA2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|369|emb|CAA30924.1| unnamed protein product [Bos taurus]
Length = 451
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 209/317 (65%), Gaps = 7/317 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDSI-TEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
+ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + +
Sbjct: 263 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 322
Query: 452 YCIATILEFAAVHYFTK 468
+ + ++EFA V+YFTK
Sbjct: 323 FVFSALIEFATVNYFTK 339
>gi|296192683|ref|XP_002744179.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Callithrix jacchus]
Length = 477
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|348506866|ref|XP_003440978.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Oreochromis niloticus]
Length = 477
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 208/341 (60%), Gaps = 12/341 (3%)
Query: 136 YMKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKN-----ITLVLNNLLKNYQSSEPP 190
Y K D+ P + E +K +G N T +L+ LL Y + P
Sbjct: 25 YRKGHRDKKNVERIRSPPSLCQSSSEAEKE---VGTNDNSTVFTRILDGLLDGYDNRLRP 81
Query: 191 NHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKML 250
G+ T IKTN+ + S GP+S+ +M+Y++D +FRQ W+D RL F GP+ L L+ +
Sbjct: 82 GLGENV-TEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNNLLA 140
Query: 251 EKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQ 310
IW PDT+ LNGK+S H +T PNKLLR+ DG +LY+MRLTI A CPM L +FPMD
Sbjct: 141 SNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAH 200
Query: 311 SCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFISSPKRNFTFKRREGEFS 367
+CPL GSYAYP+ ++VY WT G S V G ++Q+ + G+++
Sbjct: 201 ACPLKFGSYAYPVSEVVYTWTEGAKESVVVAEDGSRLNQYHLVGQSANTEDIHTSRGQYT 260
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
++ +F LKR GYFVIQ Y+PC + V+LS VSFW++RE+ R G+TTVLT++T+S+
Sbjct: 261 VMMAHFFLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 320
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
+R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 321 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 361
>gi|126291410|ref|XP_001380023.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Monodelphis domestica]
Length = 456
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|281345133|gb|EFB20717.1| hypothetical protein PANDA_000328 [Ailuropoda melanoleuca]
Length = 432
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 19 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 77
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 78 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 137
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 138 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 197
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 198 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 257
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 258 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 317
Query: 471 Y 471
Y
Sbjct: 318 Y 318
>gi|344243738|gb|EGV99841.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Cricetulus
griseus]
Length = 426
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 13 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 71
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 72 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 131
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 132 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSLLNQYDLL 191
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 192 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 251
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 252 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 311
Query: 471 Y 471
Y
Sbjct: 312 Y 312
>gi|431918112|gb|ELK17340.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Pteropus alecto]
Length = 456
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|327273674|ref|XP_003221605.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Anolis carolinensis]
Length = 442
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 206/312 (66%), Gaps = 7/312 (2%)
Query: 160 KEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDY 219
+++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+ DM+Y
Sbjct: 12 EDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDST-TEVFTNIYVTSFGPVSDTDMEY 67
Query: 220 SMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLR 279
++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLR
Sbjct: 68 TIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLR 127
Query: 280 INQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF- 338
I DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S S
Sbjct: 128 IQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTSSEVTYKWTFNASNSVE 187
Query: 339 --VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVL 396
G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V+L
Sbjct: 188 VASDGSRLNQYDLLGQTIGQETAKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVIL 247
Query: 397 SWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
S VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + +
Sbjct: 248 SQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSA 307
Query: 457 ILEFAAVHYFTK 468
++EFA V+YFTK
Sbjct: 308 LIEFATVNYFTK 319
>gi|46048945|ref|NP_989649.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Gallus
gallus]
gi|326928316|ref|XP_003210326.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Meleagris gallopavo]
gi|120753|sp|P19150.1|GBRA1_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|62901|emb|CAA38148.1| precursor peptide [Gallus gallus]
gi|228541|prf||1805342A GABA receptor A:SUBUNIT=alpha1
Length = 455
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|348575243|ref|XP_003473399.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Cavia porcellus]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|296192685|ref|XP_002744180.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
6 [Callithrix jacchus]
Length = 462
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 49 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 107
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 108 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 167
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 168 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 227
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 228 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 287
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 288 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 347
Query: 471 Y 471
Y
Sbjct: 348 Y 348
>gi|291387765|ref|XP_002710402.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, subunit alpha
1-like [Oryctolagus cuniculus]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|73954088|ref|XP_546261.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 [Canis
lupus familiaris]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|344265228|ref|XP_003404687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Loxodonta africana]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYQWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|410949366|ref|XP_003981394.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Felis catus]
Length = 477
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|403287096|ref|XP_003934793.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Saimiri boliviensis boliviensis]
Length = 477
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|426230042|ref|XP_004009092.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Ovis aries]
Length = 477
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|226315|prf||1506343A GABA A receptor alpha
Length = 455
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 100
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 101 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 161 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 220
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 221 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 280
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 281 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 340
Query: 471 Y 471
Y
Sbjct: 341 Y 341
>gi|403287090|ref|XP_003934790.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287092|ref|XP_003934791.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Saimiri boliviensis boliviensis]
gi|403287094|ref|XP_003934792.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Saimiri boliviensis boliviensis]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|6753936|ref|NP_034380.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Mus
musculus]
gi|34328532|ref|NP_899155.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Rattus
norvegicus]
gi|51317298|sp|P62813.1|GBRA1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|51317299|sp|P62812.1|GBRA1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|51036|emb|CAA43672.1| GABA A receptor alpha 1 subunit [Mus musculus]
gi|193387|gb|AAB59634.1| GABA-A receptor alpha-1 subunit [Mus musculus]
gi|193408|gb|AAA37654.1| GABA-alpha receptor alpha-1 subunit [Mus musculus]
gi|204202|gb|AAC42029.1| GABA-A receptor alpha-1 subunit [Rattus norvegicus]
gi|232586|gb|AAB19294.1| GABAA receptor alpha 1 subunit [mice, Peptide, 455 aa]
gi|26329693|dbj|BAC28585.1| unnamed protein product [Mus musculus]
gi|26333301|dbj|BAC30368.1| unnamed protein product [Mus musculus]
gi|46371155|gb|AAS90346.1| GABA-A receptor alpha1 subunit [Rattus norvegicus]
gi|71679715|gb|AAI00062.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Rattus
norvegicus]
gi|124375662|gb|AAI32332.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
gi|149052304|gb|EDM04121.1| gamma-aminobutyric acid A receptor, alpha 1, isoform CRA_b [Rattus
norvegicus]
gi|187953677|gb|AAI37734.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
Length = 455
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 100
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 101 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 161 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 220
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 221 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 280
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 281 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 340
Query: 471 Y 471
Y
Sbjct: 341 Y 341
>gi|350594445|ref|XP_003134137.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Sus scrofa]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|296192677|ref|XP_002744176.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Callithrix jacchus]
gi|296192679|ref|XP_002744177.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Callithrix jacchus]
gi|296192681|ref|XP_002744178.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Callithrix jacchus]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|395817122|ref|XP_003782024.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Otolemur garnettii]
Length = 546
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 133 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 191
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 192 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 251
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 252 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 311
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 312 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 371
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 372 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 431
Query: 471 Y 471
Y
Sbjct: 432 Y 432
>gi|301753449|ref|XP_002912566.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Ailuropoda melanoleuca]
gi|410949362|ref|XP_003981392.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Felis catus]
gi|410949364|ref|XP_003981393.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Felis catus]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|300798243|ref|NP_001178048.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Bos
taurus]
gi|426230036|ref|XP_004009089.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Ovis aries]
gi|426230038|ref|XP_004009090.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Ovis aries]
gi|426230040|ref|XP_004009091.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Ovis aries]
gi|120752|sp|P08219.1|GBRA1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|757755|emb|CAA29189.1| GABA alpha subunit [Bos taurus]
gi|88954406|gb|AAI14157.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Bos taurus]
gi|296485088|tpg|DAA27203.1| TPA: gamma-aminobutyric acid receptor subunit alpha-1 precursor
[Bos taurus]
gi|440913396|gb|ELR62849.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Bos grunniens
mutus]
gi|225660|prf||1309301A GABA/benzodiazepine receptor alpha
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|402873314|ref|XP_003900524.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Papio anubis]
Length = 477
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|410915044|ref|XP_003970997.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Takifugu rubripes]
Length = 459
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 205/301 (68%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L++LL Y + P G+ T +KT++ + S+GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TKILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI ++G +LY+MRLT
Sbjct: 102 LKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT G + S V G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLM 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|386781308|ref|NP_001247861.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
gi|75075902|sp|Q4R534.1|GBRA1_MACFA RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|67970898|dbj|BAE01791.1| unnamed protein product [Macaca fascicularis]
gi|355691821|gb|EHH27006.1| hypothetical protein EGK_17100 [Macaca mulatta]
gi|355750395|gb|EHH54733.1| hypothetical protein EGM_15625 [Macaca fascicularis]
gi|380784915|gb|AFE64333.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
gi|380784917|gb|AFE64334.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
Length = 456
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|354495034|ref|XP_003509637.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Cricetulus griseus]
Length = 455
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 100
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 101 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 161 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSLLNQYDLL 220
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 221 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 280
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 281 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 340
Query: 471 Y 471
Y
Sbjct: 341 Y 341
>gi|338713086|ref|XP_001500601.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Equus caballus]
Length = 455
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 100
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 101 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 161 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 220
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 221 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 280
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 281 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 340
Query: 471 Y 471
Y
Sbjct: 341 Y 341
>gi|402873306|ref|XP_003900520.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Papio anubis]
gi|402873308|ref|XP_003900521.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Papio anubis]
gi|402873310|ref|XP_003900522.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Papio anubis]
Length = 456
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|332238945|ref|XP_003268663.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Nomascus leucogenys]
gi|332238947|ref|XP_003268664.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Nomascus leucogenys]
gi|332238949|ref|XP_003268665.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Nomascus leucogenys]
Length = 456
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|402873312|ref|XP_003900523.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Papio anubis]
Length = 462
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 49 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 107
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 108 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 167
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 168 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 227
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 228 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 287
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 288 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 347
Query: 471 Y 471
Y
Sbjct: 348 Y 348
>gi|332822556|ref|XP_001144644.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Pan troglodytes]
gi|397473106|ref|XP_003808061.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Pan paniscus]
Length = 477
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 64 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 122
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 123 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 182
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 183 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 243 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 303 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 362
Query: 471 Y 471
Y
Sbjct: 363 Y 363
>gi|158260607|dbj|BAF82481.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|38327554|ref|NP_000797.2| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083724|ref|NP_001121115.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083726|ref|NP_001121116.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083728|ref|NP_001121117.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083734|ref|NP_001121120.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|55625298|ref|XP_518079.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
10 [Pan troglodytes]
gi|114603253|ref|XP_001144938.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Pan troglodytes]
gi|114603259|ref|XP_001145253.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
9 [Pan troglodytes]
gi|397473100|ref|XP_003808058.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Pan paniscus]
gi|397473102|ref|XP_003808059.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Pan paniscus]
gi|397473104|ref|XP_003808060.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Pan paniscus]
gi|27808653|sp|P14867.3|GBRA1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|21265168|gb|AAH30696.1| GABRA1 protein [Homo sapiens]
gi|119581942|gb|EAW61538.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1, isoform CRA_b
[Homo sapiens]
gi|119581943|gb|EAW61539.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1, isoform CRA_b
[Homo sapiens]
gi|123980024|gb|ABM81841.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 [synthetic
construct]
gi|307684854|dbj|BAJ20467.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 [synthetic
construct]
gi|226988|prf||1612349A GABA A receptor alpha
Length = 456
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|395817124|ref|XP_003782025.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Otolemur garnettii]
gi|395817128|ref|XP_003782027.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Otolemur garnettii]
Length = 456
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|75061683|sp|Q5R6B2.1|GBRA1_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|55731991|emb|CAH92704.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|395817126|ref|XP_003782026.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Otolemur garnettii]
Length = 487
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 74 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 132
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 133 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 192
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 193 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 252
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 253 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 312
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 313 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 372
Query: 471 Y 471
Y
Sbjct: 373 Y 373
>gi|197097678|ref|NP_001125803.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Pongo
abelii]
gi|55729253|emb|CAH91362.1| hypothetical protein [Pongo abelii]
gi|62898455|dbj|BAD97167.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 precursor
variant [Homo sapiens]
Length = 456
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|74200745|dbj|BAE24754.1| unnamed protein product [Mus musculus]
Length = 455
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 100
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 101 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 161 VRAECPMHLGDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 220
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 221 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 280
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 281 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 340
Query: 471 Y 471
Y
Sbjct: 341 Y 341
>gi|351698144|gb|EHB01063.1| Gamma-aminobutyric acid receptor subunit alpha-2, partial
[Heterocephalus glaber]
Length = 297
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 198/297 (66%), Gaps = 4/297 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T + TN+ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 2 TRILDRLLDGYDNRLRPGLGD-TITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDER 60
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRLT
Sbjct: 61 LKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 120
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD SCPL GSYAY ++ Y WT S+ P G ++Q+D +
Sbjct: 121 VQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLL 180
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 181 GQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 240
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFT
Sbjct: 241 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFT 297
>gi|311245120|ref|XP_003121696.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Sus scrofa]
Length = 463
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 207/316 (65%), Gaps = 7/316 (2%)
Query: 156 SNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEI 215
++ +KE+ ++ I T +L+ LL Y + P G+ T ++T++ + S GP+S+
Sbjct: 35 TSSVKEETNDNITI---FTRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDT 90
Query: 216 DMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPN 275
+M+Y++D +FRQ W+D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PN
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 276 KLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS 335
KLLR+ DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP ++VY WT G +
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTT 210
Query: 336 ISFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVL 392
S V G ++Q+ + GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 393 IVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFY 452
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 453 CIATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 331 VFSALIEFATVNYFTK 346
>gi|149691057|ref|XP_001493219.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Equus
caballus]
Length = 463
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ I
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQYHLI 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|292620121|ref|XP_683856.4| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 524
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 204/303 (67%), Gaps = 7/303 (2%)
Query: 172 NITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NITL +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ
Sbjct: 104 NITLFTRILDRLLDGYDNRLRPGLGD-RVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQR 162
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI ++G +LY
Sbjct: 163 WTDERLKFHGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLY 222
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK--SISFVP-GMAIS 345
+MRLT++A CPM L +FPMD SCPL GSYAY + ++ Y WT S+ P G ++
Sbjct: 223 TMRLTVQAECPMHLEDFPMDFHSCPLKFGSYAYTLTEVTYVWTRNATLSVEVAPDGSRLN 282
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++R
Sbjct: 283 QYDLMGQTVGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR 342
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+Y
Sbjct: 343 ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 402
Query: 466 FTK 468
FTK
Sbjct: 403 FTK 405
>gi|326672926|ref|XP_001920091.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 487
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 204/303 (67%), Gaps = 7/303 (2%)
Query: 172 NITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NITL +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ
Sbjct: 74 NITLFTRILDRLLDGYDNRLRPGLGD-RVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQR 132
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
W D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKLLRI ++G +LY
Sbjct: 133 WTDERLKFHGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLY 192
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK--SISFVP-GMAIS 345
+MRLT++A CPM L +FPMD SCPL GSYAY + ++ Y WT S+ P G ++
Sbjct: 193 TMRLTVQAECPMHLEDFPMDFHSCPLKFGSYAYTLTEVTYVWTRNATLSVEVAPDGSRLN 252
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++R
Sbjct: 253 QYDLMGQTVGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR 312
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+Y
Sbjct: 313 ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 372
Query: 466 FTK 468
FTK
Sbjct: 373 FTK 375
>gi|301624791|ref|XP_002941682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like,
partial [Xenopus (Silurana) tropicalis]
Length = 412
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 201/299 (67%), Gaps = 4/299 (1%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+L+ LL Y + P G+ T + T++ + S GP+S+ DM+Y++D +FRQ WRD RL
Sbjct: 2 ILDRLLDGYDNRLRPGLGE-RVTEVNTDIFVTSFGPVSDHDMEYTIDVFFRQGWRDERLK 60
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT++
Sbjct: 61 FKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVR 120
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFISS 352
A CPM L +FPMD +CPL GSYAY ++VY WT S+S V G ++Q+D +
Sbjct: 121 AECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYSWTREPSLSVVVAEDGSRLNQYDLLGQ 180
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R
Sbjct: 181 TVASGIVQSSTGEYIVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPART 240
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK Y
Sbjct: 241 VFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGY 299
>gi|110645496|gb|AAI18789.1| gabrg1 protein [Xenopus (Silurana) tropicalis]
Length = 374
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 195/315 (61%), Gaps = 6/315 (1%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPI 212
P + L +K HD ++T +LN LLK Y + P+ G +PT+I T+M + S+GP+
Sbjct: 50 PSNNTWLLTRKFHD----NDVTSILNGLLKGYDNKLRPDIGV-KPTVIHTDMYVNSIGPV 104
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
+ I+M+Y++D +F Q W D RL F I L L+ M+ KIW PDT+ N K++ H IT
Sbjct: 105 NAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWIT 164
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
PN++LRI DG +LY++RLTI A C + L NFPMD SCPL SY YP E+++Y W
Sbjct: 165 TPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKR 224
Query: 333 GK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ V + QF F+ K G++ ++ V F+L R GYF IQ Y+PC
Sbjct: 225 SSVEVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCT 284
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIVVLSWVSFWI+++A R LGITTVLT++T+S +R LPKV Y TA+D F+ + F
Sbjct: 285 LIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Query: 452 YCIATILEFAAVHYF 466
+ A ++E+ +HYF
Sbjct: 345 FVFAALMEYGTLHYF 359
>gi|268556984|ref|XP_002636481.1| Hypothetical protein CBG23152 [Caenorhabditis briggsae]
Length = 535
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 201/318 (63%), Gaps = 18/318 (5%)
Query: 164 KHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDC 223
+ + + +N+T +LN++L NY P G+PT + ++ IR+MGP++++ YS +C
Sbjct: 49 RRESGVAQNVTHLLNDVLNNYDQHFRPGFKSGKPTKVYIDLFIRTMGPVADLAYTYSFNC 108
Query: 224 YFRQYWRDSRLSFMGP---INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
YFRQ W D RL F LSLS+ ML+KIW+PDTY NG SYVH IT PN+L+R+
Sbjct: 109 YFRQKWTDDRLHFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTPNRLVRL 168
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--------- 331
DG ILYS R+T+KA C M + +P+D Q+C LI+GSYAY +++ Y W
Sbjct: 169 ETDGTILYSSRITVKAKCQMDMSRYPLDKQACRLIIGSYAYSSDEVQYKWRIMGEDNGVK 228
Query: 332 -PGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
+SI+ +P ++S F + N T R+ E+S L+V F RH GYF++ YVPC
Sbjct: 229 IDYESIADLPQFSLSGFKVYEAA--NLT---RDKEYSALEVRFYFDRHFGYFLMNFYVPC 283
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
L+V+L WV+F+ REAT++RIG+GIT VLT+ ISLDS++D PKV TAL+ ++ + +
Sbjct: 284 ALVVLLCWVAFFTKREATAERIGIGITNVLTIVLISLDSKSDSPKVDSPTALEVYIWICY 343
Query: 451 FYCIATILEFAAVHYFTK 468
+ ++EF VHY TK
Sbjct: 344 LTHLICMVEFTVVHYHTK 361
>gi|291403973|ref|XP_002718328.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 5-like
[Oryctolagus cuniculus]
Length = 463
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|395855524|ref|XP_003800206.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Otolemur garnettii]
gi|395855526|ref|XP_003800207.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Otolemur garnettii]
Length = 462
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 207/316 (65%), Gaps = 7/316 (2%)
Query: 156 SNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEI 215
S+ +K++ ++ I T +L+ LL Y + P G+ T ++T++ + S GP+S+
Sbjct: 35 SSSVKDETNDNITI---FTRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDT 90
Query: 216 DMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPN 275
+M+Y++D +FRQ W+D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PN
Sbjct: 91 EMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 276 KLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS 335
KLLR+ DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP ++VY WT G +
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGST 210
Query: 336 ISFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVL 392
S V G ++Q+ + GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 393 IVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFY 452
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 453 CIATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 331 VFSALIEFATVNYFTK 346
>gi|25742787|ref|NP_058991.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Rattus
norvegicus]
gi|56180|emb|CAA36248.1| GABA-A receptor [Rattus norvegicus]
Length = 464
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLARKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|301772920|ref|XP_002921879.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Ailuropoda melanoleuca]
gi|281353486|gb|EFB29070.1| hypothetical protein PANDA_010810 [Ailuropoda melanoleuca]
Length = 463
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|120764|sp|P19969.1|GBRA5_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|149031470|gb|EDL86450.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5, isoform
CRA_b [Rattus norvegicus]
Length = 464
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|71988451|ref|NP_001023766.1| Protein LGC-36 [Caenorhabditis elegans]
gi|50507791|emb|CAH04701.1| Protein LGC-36 [Caenorhabditis elegans]
Length = 536
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/318 (44%), Positives = 202/318 (63%), Gaps = 18/318 (5%)
Query: 164 KHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDC 223
K + + +N+T +LNN+LKNY P G+PT + ++ IR+MGP+S++ YS +C
Sbjct: 53 KREKGVAQNVTHLLNNVLKNYDQHFRPGFNSGKPTKVYIDLFIRTMGPVSDLFNTYSFNC 112
Query: 224 YFRQYWRDSRLSFMGP---INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
YFRQ W D RL F LSLS+ ML+KIW+PDTY NG SYVH IT N+L+R+
Sbjct: 113 YFRQKWTDDRLHFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTSNRLVRL 172
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--------- 331
DG ILYS R+T+KA C M + +P+D Q+C L++GSYAY +++ Y W
Sbjct: 173 EPDGTILYSSRITVKAKCQMDMSRYPLDKQACRLVIGSYAYSSDEVQYKWRIMGDDNGVK 232
Query: 332 -PGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
+SI+ +P ++S F + P N T R+ E+S L+V F RH GYF++ YVPC
Sbjct: 233 IDYESIADLPQFSLSGFK-VYKPA-NIT---RDKEYSALEVRFYFDRHFGYFLMNFYVPC 287
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
L+V+L WV+F+ REAT++RIG+GIT VLT+ IS+DS++D PKV TAL+ F+ + +
Sbjct: 288 ALVVLLCWVAFFTKREATAERIGIGITNVLTIVLISMDSKSDSPKVDSPTALEVFIWICY 347
Query: 451 FYCIATILEFAAVHYFTK 468
+ ++EF VHY TK
Sbjct: 348 LTHLICMVEFTVVHYHTK 365
>gi|73950993|ref|XP_545805.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Canis
lupus familiaris]
Length = 463
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|426248011|ref|XP_004017759.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Ovis
aries]
Length = 462
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTAKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|402873745|ref|XP_003900722.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Papio anubis]
gi|402873747|ref|XP_003900723.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Papio anubis]
gi|355692546|gb|EHH27149.1| GABA(A) receptor subunit alpha-5 [Macaca mulatta]
gi|380787889|gb|AFE65820.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Macaca
mulatta]
Length = 462
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|30578386|ref|NP_795916.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Mus
musculus]
gi|66774012|sp|Q8BHJ7.1|GBRA5_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|26332589|dbj|BAC30012.1| unnamed protein product [Mus musculus]
gi|26350319|dbj|BAC38799.1| unnamed protein product [Mus musculus]
gi|38328408|gb|AAH62112.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5 [Mus
musculus]
Length = 463
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|109080427|ref|XP_001109231.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Macaca mulatta]
Length = 462
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|403306403|ref|XP_003943726.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Saimiri boliviensis boliviensis]
Length = 462
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|344257366|gb|EGW13470.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Cricetulus
griseus]
Length = 465
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 52 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 110
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 111 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 170
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 171 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 230
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 231 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 290
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 291 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 348
>gi|4503861|ref|NP_000801.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Homo
sapiens]
gi|259013560|ref|NP_001158509.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Homo
sapiens]
gi|397515745|ref|XP_003828106.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Pan paniscus]
gi|397515747|ref|XP_003828107.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Pan paniscus]
gi|441615879|ref|XP_003272869.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Nomascus leucogenys]
gi|399519|sp|P31644.1|GBRA5_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|182916|gb|AAA58490.1| GABA-benzodiazepine receptor alpha-5-subunit [Homo sapiens]
gi|251889|gb|AAB22608.1| gamma-aminobutyric acid receptor alpha5 subunit, GABA-A receptor
alpha5 subunit [human, Peptide, 462 aa]
gi|32880003|gb|AAP88832.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Homo sapiens]
gi|60654709|gb|AAX31919.1| gamma-aminobutyric acid [synthetic construct]
gi|60654711|gb|AAX31920.1| gamma-aminobutyric acid [synthetic construct]
gi|60654713|gb|AAX31921.1| gamma-aminobutyric acid [synthetic construct]
gi|60654715|gb|AAX31922.1| gamma-aminobutyric acid [synthetic construct]
gi|85567072|gb|AAI11980.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5, precursor [Homo
sapiens]
gi|109731251|gb|AAI13423.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Homo sapiens]
gi|123995183|gb|ABM85193.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [synthetic
construct]
gi|157928833|gb|ABW03702.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [synthetic
construct]
gi|158261929|dbj|BAF83142.1| unnamed protein product [Homo sapiens]
gi|313883374|gb|ADR83173.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 (GABRA5),
transcript variant 1 [synthetic construct]
Length = 462
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|354488285|ref|XP_003506301.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Cricetulus griseus]
Length = 463
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|301624789|ref|XP_002941681.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2
[Xenopus (Silurana) tropicalis]
Length = 505
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 195/315 (61%), Gaps = 6/315 (1%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPI 212
P + L +K HD ++T +LN LLK Y + P+ G +PT+I T+M + S+GP+
Sbjct: 80 PSNNTWLLTRKFHD----NDVTSILNGLLKGYDNKLRPDIGV-KPTVIHTDMYVNSIGPV 134
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
+ I+M+Y++D +F Q W D RL F I L L+ M+ KIW PDT+ N K++ H IT
Sbjct: 135 NAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWIT 194
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
PN++LRI DG +LY++RLTI A C + L NFPMD SCPL SY YP E+++Y W
Sbjct: 195 TPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKR 254
Query: 333 GK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ V + QF F+ K G++ ++ V F+L R GYF IQ Y+PC
Sbjct: 255 SSVEVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCT 314
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIVVLSWVSFWI+++A R LGITTVLT++T+S +R LPKV Y TA+D F+ + F
Sbjct: 315 LIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 374
Query: 452 YCIATILEFAAVHYF 466
+ A ++E+ +HYF
Sbjct: 375 FVFAALMEYGTLHYF 389
>gi|348552636|ref|XP_003462133.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Cavia porcellus]
Length = 601
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|115495909|ref|NP_001069312.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Bos
taurus]
gi|122132467|sp|Q08E50.1|GBRA5_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|115304763|gb|AAI23419.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Bos taurus]
gi|296475587|tpg|DAA17702.1| TPA: gamma-aminobutyric acid receptor subunit alpha-5 precursor
[Bos taurus]
Length = 462
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTAKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|301619761|ref|XP_002939243.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Xenopus (Silurana) tropicalis]
Length = 480
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 199/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 62 TRILDRLLDGYDNRLRPGLGDSV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWLDER 120
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GPI L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 121 LKFDGPIRTLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLIDNGTLLYTMRLT 180
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVP-GMAISQFDFI 350
I A C M L +FPMD +CPL GSYAYP ++VY WT G KS++ P G ++Q+D +
Sbjct: 181 IHAECTMHLEDFPMDVHACPLKFGSYAYPKTEVVYSWTNGSNKSVAVAPDGSRLNQYDLL 240
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 241 GVAVGTETIRSSTGEYIVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 300
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 301 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTK 358
>gi|444516736|gb|ELV11269.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Tupaia chinensis]
Length = 430
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W D R
Sbjct: 18 TRILDGLLDGYDNRLRPGLGE-RVTQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWEDER 76
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + +IW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 77 LRFKGPMQRLPLNNLLASRIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 136
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 137 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 196
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 197 GQTVGTANISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 256
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 257 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 314
>gi|198420850|ref|XP_002119743.1| PREDICTED: similar to gamma-aminobutyric acid A receptor, alpha 6
[Ciona intestinalis]
Length = 500
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 198/304 (65%), Gaps = 9/304 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
++IT L+N L NY + P +G PT + + + GP SE DMDY++D +FRQ WR
Sbjct: 33 EDITRTLDNFLLNYDNRIRPGLEEG-PTKVYSYFFVTGFGPASEQDMDYTLDMFFRQRWR 91
Query: 231 DSRLSFM---GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
D RL+F I L L+ M++++W PD++ NGK+S H ITVPN+LLRI+ +G+IL
Sbjct: 92 DERLAFKHMNKNITELKLNNNMVQRLWTPDSFFRNGKKSIAHNITVPNRLLRIDPNGNIL 151
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW---TPGKSISFVPGMA- 343
Y+MRLTIKA CPM L +FPMD +C L+ GSY Y +++ + W K VP +
Sbjct: 152 YTMRLTIKARCPMILIDFPMDVHTCHLVYGSYGYTKDQMQFLWYTENGRKPAVDVPSSSS 211
Query: 344 -ISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFW 402
++QF I+ GE+S+L+ F+LKR GYFVIQ Y+PC+LIV+LS +SFW
Sbjct: 212 RLNQFKLINYTWTTNIINTISGEYSVLETKFHLKRQMGYFVIQTYLPCILIVILSQISFW 271
Query: 403 IHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAA 462
I++EA R GI TVL+L+ +S+ +R LPKV YATALDW++ + F +C A ++EFA+
Sbjct: 272 INKEAVPARTVSGIMTVLSLTMLSISTRQSLPKVAYATALDWYMAVCFAFCFAALIEFAS 331
Query: 463 VHYF 466
V+YF
Sbjct: 332 VNYF 335
>gi|7507938|pir||T20544 hypothetical protein T19B10.10 - Caenorhabditis elegans
Length = 1187
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 222/370 (60%), Gaps = 23/370 (6%)
Query: 116 LHFVSTFNVLSMFSVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKK----KHDLMIGK 171
LH +S F V S+ ++ + + +E K N + + K+ K + + +
Sbjct: 2 LHRISKFTV-SLIIFFISTIILSVCGNELKFTIENVKFRSPGSFRIKRTVHPKREKGVAQ 60
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N+T +LNN+LKNY P G+PT + ++ IR+MGP+S++ YS +CYFRQ W D
Sbjct: 61 NVTHLLNNVLKNYDQHFRPGFNSGKPTKVYIDLFIRTMGPVSDLFNTYSFNCYFRQKWTD 120
Query: 232 SRLSFMGP---INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
RL F LSLS+ ML+KIW+PDTY NG SYVH IT N+L+R+ DG ILY
Sbjct: 121 DRLHFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTSNRLVRLEPDGTILY 180
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW----------TPGKSISF 338
S R+T+KA C M + +P+D Q+C L++GSYAY +++ Y W +SI+
Sbjct: 181 SSRITVKAKCQMDMSRYPLDKQACRLVIGSYAYSSDEVQYKWRIMGDDNGVKIDYESIAD 240
Query: 339 VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSW 398
+P ++S F + P N T R+ E+S L+V F RH GYF++ YVPC L+V+L W
Sbjct: 241 LPQFSLSGFK-VYKPA-NIT---RDKEYSALEVRFYFDRHFGYFLMNFYVPCALVVLLCW 295
Query: 399 VSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATIL 458
V+F+ REAT++RIG+GIT VLT+ IS+DS++D PKV TAL+ F+ + + + ++
Sbjct: 296 VAFFTKREATAERIGIGITNVLTIVLISMDSKSDSPKVDSPTALEVFIWICYLTHLICMV 355
Query: 459 EFAAVHYFTK 468
EF VHY TK
Sbjct: 356 EFTVVHYHTK 365
>gi|351696714|gb|EHA99632.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Heterocephalus
glaber]
Length = 468
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 204/313 (65%), Gaps = 16/313 (5%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGE------------PTIIKTNMLIRSMGPISEIDMDYSM 221
T +L+ LL Y + P G GE T +KT++ + S GP+S+ DM+Y++
Sbjct: 43 TRILDRLLDGYDNRLRPGLG-GEYSLGQFPAPSERVTEVKTDIFVTSFGPVSDHDMEYTI 101
Query: 222 DCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRIN 281
D +FRQ W+D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI
Sbjct: 102 DVFFRQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIT 161
Query: 282 QDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFV 339
+DG +LY+MRLT++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+
Sbjct: 162 EDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVA 221
Query: 340 P-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSW 398
G ++Q+D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS
Sbjct: 222 EDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQ 281
Query: 399 VSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATIL 458
VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++
Sbjct: 282 VSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 341
Query: 459 EFAAVHYFTKLCY 471
EFA V+YFTK Y
Sbjct: 342 EFATVNYFTKRGY 354
>gi|224043000|ref|XP_002197368.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Taeniopygia guttata]
Length = 463
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 205/316 (64%), Gaps = 7/316 (2%)
Query: 159 LKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMD 218
+KE+ ++ I T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+
Sbjct: 38 VKEEANDNITI---FTRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEME 93
Query: 219 YSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLL 278
Y++D +FRQ W+D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLL
Sbjct: 94 YTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLL 153
Query: 279 RINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF 338
R+ DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT + S
Sbjct: 154 RLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSV 213
Query: 339 V---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
V G ++Q+ + GE++++ +F+LKR GYFVIQ Y+PC++ V+
Sbjct: 214 VVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVI 273
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + +
Sbjct: 274 LSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFS 333
Query: 456 TILEFAAVHYFTKLCY 471
++EFA V+YFTK +
Sbjct: 334 ALIEFATVNYFTKRSW 349
>gi|204212|gb|AAC42033.1| GABA-A receptor alpha-5 subunit [Rattus norvegicus]
Length = 464
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRL
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLM 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|46048735|ref|NP_990576.1| gamma-aminobutyric acid receptor subunit gamma-4 precursor [Gallus
gallus]
gi|462150|sp|P34904.1|GBRG4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-4;
AltName: Full=GABA(A) receptor subunit gamma-4; Flags:
Precursor
gi|414022|emb|CAA51939.1| GABA-A receptor [Gallus gallus]
Length = 457
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 199/316 (62%), Gaps = 2/316 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN+LLKNY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 48 DATQILNSLLKNYDNKLRPDIGI-KPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYD 106
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 107 RRLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 166
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPL+ SY YP E++VY W +S + QFDF
Sbjct: 167 LTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFT 226
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 227 GLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 286
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 287 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNK 346
Query: 471 YPGYPSGFIERLPVIG 486
P S RLP G
Sbjct: 347 KPLEHSSRKARLPPAG 362
>gi|126337128|ref|XP_001362894.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Monodelphis domestica]
Length = 463
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 199/301 (66%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYIWTNGTAKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 348
Query: 471 Y 471
+
Sbjct: 349 W 349
>gi|326913720|ref|XP_003203182.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Meleagris gallopavo]
Length = 463
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 198/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 348
Query: 471 Y 471
+
Sbjct: 349 W 349
>gi|291224455|ref|XP_002732219.1| PREDICTED: Gamma-aminobutyric acid receptor subunit alpha-6-like
[Saccoglossus kowalevskii]
Length = 456
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 198/318 (62%), Gaps = 8/318 (2%)
Query: 157 NHLKEKKKHDLMIGK--NITLVLNNLLK--NYQSSEPPNHGKGEPTIIKTNMLIRSMGPI 212
N +++ ++ +M + NI++ L +++ NY S P G G P ++ +M S+GP+
Sbjct: 28 NAIEDARRAQIMEERRRNISVTLKKMVEYPNYDKSLRPGAG-GRPVNVQADMYALSIGPV 86
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMGP-INNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
EIDM+Y +D +FRQ W D RL+ + LSL+ MLE IW PDTY NGK+SY H+I
Sbjct: 87 VEIDMEYHLDVFFRQRWTDPRLAHRDSHYDILSLNTVMLESIWYPDTYFHNGKKSYDHSI 146
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
T PN+L RI +G +LY+ RLTI A C M +PMD Q CPL GS ++ + ++Y W
Sbjct: 147 TTPNRLFRIGPNGTVLYTQRLTIVAECKMHFEKYPMDGQMCPLQFGSNSFSTDDIIYDWH 206
Query: 332 PGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
P K + P + +SQF+F K R G+ S+L F L+R GYF+IQ+YVPC
Sbjct: 207 PDK-VEVSPDLRLSQFEFTHQDTEKIRLKSDRIGDRSVLVARFYLQRRLGYFMIQIYVPC 265
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
+LI VLSWVSFW++ EAT R+ LG+ T+LT++T+ R LPKV Y ALDW+L + F
Sbjct: 266 ILITVLSWVSFWLNPEATPARVALGVMTILTITTLGWSIRDSLPKVSYGKALDWYLALCF 325
Query: 451 FYCIATILEFAAVHYFTK 468
+ + +++EFAA Y TK
Sbjct: 326 TFVLGSLVEFAAATYLTK 343
>gi|224098554|ref|XP_002186871.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4
[Taeniopygia guttata]
Length = 447
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 199/316 (62%), Gaps = 2/316 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN+LLKNY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 40 DATQILNSLLKNYDNKLRPDIGI-KPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYD 98
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 99 RRLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 158
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPL+ SY YP E++VY W +S + QFDF
Sbjct: 159 LTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFT 218
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 219 GLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 278
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 279 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNK 338
Query: 471 YPGYPSGFIERLPVIG 486
P S RLP G
Sbjct: 339 KPLEHSHRRARLPPAG 354
>gi|301604063|ref|XP_002931687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Xenopus (Silurana) tropicalis]
Length = 442
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 21 TRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 79
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H IT PNKLLR+ DG +LY+MRLT
Sbjct: 80 LCFQGPMPRLPLNNLLASKIWTPDTFFHNGKKSIAHNITTPNKLLRLEDDGTLLYTMRLT 139
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +L Y WT S V G ++Q+ I
Sbjct: 140 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSELRYEWTNITDKSVVVAEDGSRLNQYHLI 199
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 200 GQTVGTENISTSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 259
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 260 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 319
Query: 471 Y 471
+
Sbjct: 320 W 320
>gi|118084219|ref|XP_416880.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Gallus
gallus]
Length = 463
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 198/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 348
Query: 471 Y 471
+
Sbjct: 349 W 349
>gi|31633|emb|CAA32874.1| GABA-A receptor alpha 1 subunit [Homo sapiens]
Length = 456
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 202/301 (67%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KI PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIRTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 341
Query: 471 Y 471
Y
Sbjct: 342 Y 342
>gi|22652233|gb|AAN03653.1|AF411006_1 gamma-aminobutyric acid A receptor alpha 1 subunit [Rana
catesbeiana]
Length = 354
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 192/277 (69%), Gaps = 3/277 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T +KT++ + S GP+S+ DM+Y++D +FRQ WRD RL F GP+ L L+ M KIW PD
Sbjct: 5 TEVKTDIFVTSFGPVSDHDMEYTIDVFFRQGWRDERLKFKGPMTVLRLNNLMASKIWTPD 64
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T+PNKLLRI +DG +LY+MRLT++A CPM L +FPMD +CPL G
Sbjct: 65 TFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFG 124
Query: 318 SYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SYAY ++VY WT P +S+ G ++Q+D + + + GE+ ++ +F+
Sbjct: 125 SYAYTRAEVVYTWTREPAQSVVVAEDGSRLNQYDLLGLNVASGIVQSSTGEYVVMTTHFH 184
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LP
Sbjct: 185 LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP 244
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
KV YATA+DWF+ + + + + ++EFA V+YFTK Y
Sbjct: 245 KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKQGY 281
>gi|326924426|ref|XP_003208428.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Meleagris gallopavo]
Length = 450
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 199/316 (62%), Gaps = 2/316 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN+LLKNY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 41 DATQILNSLLKNYDNKLRPDIGI-KPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYD 99
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 100 RRLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 159
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPL+ SY YP E++VY W +S + QFDF
Sbjct: 160 LTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFT 219
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 220 GLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 279
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 280 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNK 339
Query: 471 YPGYPSGFIERLPVIG 486
P + RLP G
Sbjct: 340 KPLEHNSRKARLPPAG 355
>gi|268570839|ref|XP_002640851.1| Hypothetical protein CBG15739 [Caenorhabditis briggsae]
Length = 500
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 202/299 (67%), Gaps = 9/299 (3%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T VL+ +L N + P + P ++ ++ +RSMGPISE +M++S+DCYFRQ W D R
Sbjct: 46 TKVLDTILLNQDKNFRPMNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRR 105
Query: 234 LSFMGPIN----NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
L+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN L R+ DG + S
Sbjct: 106 LAFT-PINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVS 164
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
RLTI++ C M L+ FPMDTQ+CP+ +GS Y + ++Y W + S + M +SQ+
Sbjct: 165 QRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVIYRWKEVELDSKMGNM-LSQYQI 223
Query: 350 ISSPK--RNFT-FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+S K RN + F+ + S+L V F L+R +GY+++Q+Y PC L+VV+SWVSFWI++E
Sbjct: 224 LSLSKSERNVSDFRYTDRNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKE 283
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
A+ R+ LGI TVL++STI RTDLPKV ++TALD ++L F + A ++E+A ++Y
Sbjct: 284 ASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMVEYAVINY 342
>gi|31637|emb|CAA33437.1| GABA-A receptor gamma 2 subunit [Homo sapiens]
gi|226325|prf||1506443A GABAa receptor gamma2
Length = 467
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQMWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LYS+R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYSLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|327268064|ref|XP_003218818.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Anolis carolinensis]
Length = 462
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 199/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITEVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMERLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNTPATSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQSVDSENISTSTGEYTIMRAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|344298011|ref|XP_003420688.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Loxodonta africana]
Length = 463
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LQFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP ++VY WT + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNDTTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|40736921|dbj|BAD06983.1| gamma-aminobutyric acid A receptor subunit alpha 6 [Oreochromis
niloticus]
Length = 269
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 181/269 (67%), Gaps = 4/269 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPI 240
L Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D RL F GPI
Sbjct: 1 LDGYDNRLRPGFG-GPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPI 59
Query: 241 NNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPM 300
L L+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+MRLTI A CPM
Sbjct: 60 EILRLNNLMISKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPM 119
Query: 301 SLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QFDFISSPKRNF 357
L NFPMD +CPL GSYAYPI ++VY W G S VP + S Q+D I +
Sbjct: 120 RLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSE 179
Query: 358 TFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGIT 417
K GE+ ++ V+F+L+R G+F+IQ Y+PC++ V+L+ VSFWI++E+ R GIT
Sbjct: 180 RLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGIT 239
Query: 418 TVLTLSTISLDSRTDLPKVRYATALDWFL 446
TVLT++T+S+ +R LPKV YATA+DWF+
Sbjct: 240 TVLTMTTLSISARHSLPKVSYATAMDWFI 268
>gi|148700392|gb|EDL32339.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_b [Mus musculus]
Length = 393
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 73 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 131
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 132 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 191
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 192 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 251
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 252 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 311
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 312 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 367
>gi|27806989|ref|NP_776970.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Bos
taurus]
gi|120784|sp|P22300.1|GBRG2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|163070|gb|AAA30531.1| gamma-aminobutyrate receptor type A gamma-2 subuni [Bos taurus]
Length = 475
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 190/296 (64%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFGQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W +S + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVSDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|343469067|gb|AEM43800.1| gamma-aminobutyric acid A receptor subunit gamma-2 [Xenopus laevis]
Length = 464
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 193/315 (61%), Gaps = 6/315 (1%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPI 212
P + L +K HD ++T +LN LLK Y + P+ G +PT+I T+M + S+GP+
Sbjct: 47 PSNNTWLLTRKFHD----NDVTSILNGLLKGYDNKLRPDIGV-KPTVIHTDMYVNSIGPV 101
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
+ I+M+Y++D +F Q W D RL F I L L+ M+ KIW PDT+ N K++ H IT
Sbjct: 102 NAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWIT 161
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
PN++LRI DG +LY++RLTI A C + L NFPMD SCPL SY YP E+++Y W
Sbjct: 162 TPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKR 221
Query: 333 GK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ V + QF F+ K G++ ++ V F+L R GYF IQ Y+PC
Sbjct: 222 SSVEVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMAVYFDLSRRMGYFTIQTYIPCT 281
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIVVL WVSFWI+++A R LGITTVLT++T+S +R LPKV Y TA+D F+ + F
Sbjct: 282 LIVVLFWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 341
Query: 452 YCIATILEFAAVHYF 466
+ A +E+ +HYF
Sbjct: 342 FVFAAFIEYGTLHYF 356
>gi|149620175|ref|XP_001521784.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Ornithorhynchus anatinus]
Length = 393
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T + TN+ + S GP+S+ DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PD
Sbjct: 3 TEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPD 62
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T+PNKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL G
Sbjct: 63 TFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFG 122
Query: 318 SYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SYAY ++ Y WT S S G ++Q+D + T K GE++++ +F+
Sbjct: 123 SYAYTTSEVTYIWTYNASDSVQVASDGSRLNQYDLLGQTIGKETIKSSTGEYTVMTAHFH 182
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LP
Sbjct: 183 LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP 242
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
KV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 243 KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 276
>gi|449267234|gb|EMC78200.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial [Columba
livia]
Length = 430
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 28 DVTLILNGLLEGYDNKLRPDIGV-KPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 86
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 87 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 146
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E+++Y W + + QF F
Sbjct: 147 LTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFT 206
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V FNL R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 207 GLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 266
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 267 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 322
>gi|71996779|ref|NP_499662.2| Protein LGC-37 [Caenorhabditis elegans]
gi|30145743|emb|CAB07722.2| Protein LGC-37 [Caenorhabditis elegans]
Length = 483
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 200/299 (66%), Gaps = 9/299 (3%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T VL+ +L N + P + P ++ ++ IRSMGP+SE +M++S+DCYFRQ W D R
Sbjct: 45 TKVLDTILLNQDKNFRPVNPDNSPLQVEVDISIRSMGPVSEQNMEFSLDCYFRQKWLDRR 104
Query: 234 LSFMGPIN----NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
L+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN L R+ DG + S
Sbjct: 105 LAFT-PINPSKPEIPLASKMLKDIWIPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVS 163
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
RLTI++ C M L+ FPMDTQ+CP+ +GS Y + +VY W + G +SQ+
Sbjct: 164 QRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVVYKWK-DVELDAKMGNTLSQYQV 222
Query: 350 ISSPK--RNFT-FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+S K RN + F+ + S+L V F L+R +GY+++Q+Y PC L+VV+SWVSFWI++E
Sbjct: 223 LSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKE 282
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
A+ R+ LGI TVL++STI RTDLPKV ++TALD ++L F + A ++E+A ++Y
Sbjct: 283 ASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVINY 341
>gi|410915502|ref|XP_003971226.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Takifugu rubripes]
Length = 458
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 214/336 (63%), Gaps = 12/336 (3%)
Query: 143 ETKTHWTNRLPKVSNH---LKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEP-T 198
E +T + R V H + + K ++ I T +L+ LL Y + P G GE T
Sbjct: 9 EKRTASSMRRGAVVGHREPIPDDSKDNITI---FTRILDRLLDGYDNRLRP--GLGESVT 63
Query: 199 IIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDT 258
++TN+ + S GP+S+ DM+Y++D +FRQ WRD RL F GP+ L L+ + KIW PDT
Sbjct: 64 EVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPLNNLLASKIWTPDT 123
Query: 259 YILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGS 318
+ NGK+S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD+ +CPL GS
Sbjct: 124 FFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDSHACPLKFGS 183
Query: 319 YAYPIEKLVYHWTPG--KSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNL 375
YAY +++Y WT G +S+S G ++Q+D + T GE+ ++ F+L
Sbjct: 184 YAYTNNEVIYLWTQGDERSVSVAEDGSRLNQYDLLGHVIGKETISSSTGEYVVMTTYFHL 243
Query: 376 KRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPK 435
KR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPK
Sbjct: 244 KRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPK 303
Query: 436 VRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
V YATA+DWF+ + + + + ++EFA V+YFTK +
Sbjct: 304 VAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSW 339
>gi|26340598|dbj|BAC33961.1| unnamed protein product [Mus musculus]
Length = 384
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|34328527|ref|NP_899156.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Rattus
norvegicus]
gi|120788|sp|P18508.1|GBRG2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|204218|gb|AAC42036.1| GABA-A receptor gamma-2 subunit [Rattus norvegicus]
Length = 466
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|57085659|ref|XP_546259.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Canis lupus familiaris]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|426230046|ref|XP_004009094.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Ovis aries]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|73953524|ref|XP_867037.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
5 [Canis lupus familiaris]
Length = 475
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|335304135|ref|XP_003359873.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 [Sus
scrofa]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|348575249|ref|XP_003473402.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Cavia porcellus]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|326928314|ref|XP_003210325.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Meleagris gallopavo]
Length = 474
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTLILNGLLEGYDNKLRPDIGV-KPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E+++Y W + + QF F
Sbjct: 183 LTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFT 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V FNL R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|301607834|ref|XP_002933509.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Xenopus (Silurana) tropicalis]
Length = 773
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 220/356 (61%), Gaps = 7/356 (1%)
Query: 116 LHFVSTFNVLSMFSVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITL 175
L V T + + L + +I+ T W + + + + K+++ I T
Sbjct: 311 LKVVVTIKIEATMGTTLASCRKEILLFFTLVLWESSSQVLGDTVDNDAKNNITI---FTR 367
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+L+ LL Y + P G T + T++ + S GP+S+ DM+Y++D +FRQ W+D RL
Sbjct: 368 ILDRLLDGYDNRLRPGLGD-RVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQNWQDERLR 426
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
F GP++ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRLT++
Sbjct: 427 FKGPMHILRLNNLMANKIWTPDTFFHNGKKSIAHNMTMPNKLLRIQDDGTLLYTMRLTVQ 486
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFISS 352
A CPM L +FPMD +CPL GSYAY ++ Y WT +S+ P G ++Q+ +
Sbjct: 487 AECPMHLEDFPMDAHACPLKFGSYAYTTSEVTYVWTRNATESVVVAPDGSRLNQYVLLGH 546
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R
Sbjct: 547 LVGKETIKSSTGEYTVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPART 606
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 607 VFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 662
>gi|74205307|dbj|BAE23157.1| unnamed protein product [Mus musculus]
Length = 445
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 43 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 101
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 102 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 161
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 162 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 222 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 282 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 337
>gi|431918113|gb|ELK17341.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Pteropus alecto]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|47222907|emb|CAF99063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 317
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 199/311 (63%), Gaps = 17/311 (5%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT +L+ LL Y + P G G T +KT++ + S GP+S+ +M+Y+ D +FRQ W D
Sbjct: 6 NITRILDRLLDGYDNRLRPGSGGGV-TEVKTDIFVTSFGPVSDAEMEYTTDMFFRQMWVD 64
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F GP L L+ +M++KIW PDT+ N K+S H +T PNKL RI ++G +LY+MR
Sbjct: 65 ERLKFEGPTEILRLNNRMVDKIWIPDTFFRNSKKSISHNMTTPNKLFRIMKNGTVLYTMR 124
Query: 292 -------------LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF 338
LTI A+CPM L +FPMD +CPL GSYAY ++++ W G S
Sbjct: 125 VVSKPCVRPTSVRLTITADCPMRLMDFPMDGHACPLRFGSYAYTSSEIMFTWRKGPVASV 184
Query: 339 -VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
P +IS Q+D + + F+ G +S+ V+F+L+R GY++IQ Y+P ++IVV
Sbjct: 185 DCPKESISLLQYDLVGQTLSSEIFRSNTGHYSVQVVHFHLQRKIGYYLIQTYIPLIMIVV 244
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + +
Sbjct: 245 LSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYATAMDWFIAVCFAFVAS 304
Query: 456 TILEFAAVHYF 466
++EFAAV+YF
Sbjct: 305 ALVEFAAVNYF 315
>gi|38788135|ref|NP_000807.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Homo sapiens]
gi|197097822|ref|NP_001127212.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Pongo
abelii]
gi|387763055|ref|NP_001248707.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Macaca
mulatta]
gi|332238955|ref|XP_003268668.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Nomascus leucogenys]
gi|397473096|ref|XP_003808056.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Pan paniscus]
gi|426350890|ref|XP_004042996.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Gorilla gorilla gorilla]
gi|75061993|sp|Q5REA1.1|GBRG2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|5738138|gb|AAD50273.1| gamma-aminobutyric acid A receptor gamma 2 [Homo sapiens]
gi|46854833|gb|AAH69348.1| Gamma-aminobutyric acid A receptor, gamma 2, isoform 2 precursor
[Homo sapiens]
gi|50959647|gb|AAH74795.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
gi|55726269|emb|CAH89906.1| hypothetical protein [Pongo abelii]
gi|119581937|gb|EAW61533.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_b
[Homo sapiens]
gi|380783787|gb|AFE63769.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Macaca mulatta]
Length = 467
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|149726126|ref|XP_001503417.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Equus caballus]
Length = 467
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|26338570|dbj|BAC32956.1| unnamed protein product [Mus musculus]
Length = 453
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 43 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 101
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 102 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 161
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 162 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 222 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 282 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 337
>gi|38788155|ref|NP_944494.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Homo sapiens]
gi|332238953|ref|XP_003268667.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Nomascus leucogenys]
gi|397473094|ref|XP_003808055.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Pan paniscus]
gi|426350892|ref|XP_004042997.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Gorilla gorilla gorilla]
gi|119581936|gb|EAW61532.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_a
[Homo sapiens]
gi|380783785|gb|AFE63768.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Macaca mulatta]
Length = 475
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|311273985|ref|XP_003134135.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sus scrofa]
Length = 475
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|410949360|ref|XP_003981391.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Felis catus]
Length = 467
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|410949358|ref|XP_003981390.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Felis catus]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|395817120|ref|XP_003782023.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Otolemur garnettii]
Length = 467
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|395817118|ref|XP_003782022.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Otolemur garnettii]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|296485089|tpg|DAA27204.1| TPA: gamma-aminobutyric acid receptor subunit gamma-2 precursor
[Bos taurus]
gi|440892011|gb|ELR45398.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Bos grunniens
mutus]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|341899073|gb|EGT55008.1| hypothetical protein CAEBREN_00525 [Caenorhabditis brenneri]
Length = 484
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 202/299 (67%), Gaps = 9/299 (3%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T VL+ +L N + P + P ++ ++ +RSMGPISE +M++S+DCYFRQ W D R
Sbjct: 45 TKVLDTILLNQDKNFRPVNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRR 104
Query: 234 LSFMGPIN----NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
L+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN L R+ DG + S
Sbjct: 105 LAFT-PINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVS 163
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
RLTI++ C M L+ FPMDTQ+CP+ +GS Y + ++Y W + S + M +SQ+
Sbjct: 164 QRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVIYKWKEVELDSKMGNM-LSQYQV 222
Query: 350 ISSPK--RNFT-FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+S K RN + F+ + S+L V F L+R +GY+++Q+Y PC L+VV+SWVSFWI++E
Sbjct: 223 LSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKE 282
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
A+ R+ LGI TVL++STI RTDLPKV ++TALD ++L F + A ++E+A ++Y
Sbjct: 283 ASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMVEYAVINY 341
>gi|46371159|gb|AAS90348.1| GABA-A gamma2 long isoform [Rattus norvegicus]
gi|149052302|gb|EDM04119.1| gamma-aminobutyric acid A receptor, gamma 2 [Rattus norvegicus]
Length = 474
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|14626498|gb|AAK71574.1|AF233776_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626502|gb|AAK71576.1|AF233778_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626504|gb|AAK71577.1|AF233779_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626506|gb|AAK71578.1|AF233780_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626508|gb|AAK71579.1|AF233781_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626512|gb|AAK71581.1|AF233783_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626516|gb|AAK71583.1|AF233785_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626518|gb|AAK71584.1|AF233786_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626530|gb|AAK71590.1|AF233792_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626532|gb|AAK71591.1|AF233793_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626534|gb|AAK71592.1|AF233794_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626538|gb|AAK71594.1|AF233796_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626540|gb|AAK71595.1|AF233797_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626544|gb|AAK71597.1|AF233799_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626550|gb|AAK71600.1|AF233802_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
Length = 474
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|444741657|ref|NP_803127.3| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Mus musculus]
Length = 466
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|6679915|ref|NP_032099.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Mus musculus]
gi|20141351|sp|P22723.3|GBRG2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|14626496|gb|AAK71573.1|AF233775_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626500|gb|AAK71575.1|AF233777_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626510|gb|AAK71580.1|AF233782_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626514|gb|AAK71582.1|AF233784_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626520|gb|AAK71585.1|AF233787_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626522|gb|AAK71586.1|AF233788_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626524|gb|AAK71587.1|AF233789_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626526|gb|AAK71588.1|AF233790_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626528|gb|AAK71589.1|AF233791_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626536|gb|AAK71593.1|AF233795_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626542|gb|AAK71596.1|AF233798_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626546|gb|AAK71598.1|AF233800_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626548|gb|AAK71599.1|AF233801_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|193404|gb|AAA37653.1| GABA-alpha receptor gamma-2 subunit [Mus musculus]
gi|21619326|gb|AAH31762.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 [Mus
musculus]
gi|148700391|gb|EDL32338.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_a [Mus musculus]
Length = 474
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|46047386|ref|NP_990676.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Gallus
gallus]
gi|120785|sp|P21548.1|GBRG2_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|62897|emb|CAA38704.1| GABA-A receptor gamma-2 subunit [Gallus gallus]
Length = 474
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTLILNGLLEGYDNKLRPDIGV-KPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E+++Y W + + QF F
Sbjct: 183 LTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFT 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V FNL R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|193406|gb|AAB59635.1| gamma-aminobutyric acid A receptor gamma-2 subunit [Mus musculus]
Length = 466
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|308499242|ref|XP_003111807.1| CRE-LGC-37 protein [Caenorhabditis remanei]
gi|308239716|gb|EFO83668.1| CRE-LGC-37 protein [Caenorhabditis remanei]
Length = 491
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 201/299 (67%), Gaps = 9/299 (3%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T VL+ +L N + P + P ++ ++ +RSMGPISE +M++S+DCYFRQ W D R
Sbjct: 55 TKVLDTILLNQDKNFRPVNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRR 114
Query: 234 LSFMGPIN----NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
L+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN L R+ DG + S
Sbjct: 115 LAFT-PINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVS 173
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
RLTI++ C M L+ FPMDTQ+CP+ +GS Y ++Y W + S + M +SQ+
Sbjct: 174 QRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSRDVIYKWKEVELDSKMGNM-LSQYQI 232
Query: 350 ISSPK--RNFT-FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+S K RN + F+ + S+L V F L+R +GY+++Q+Y PC L+VV+SWVSFWI++E
Sbjct: 233 LSLSKSERNVSDFRFADRNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKE 292
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
A+ R+ LGI TVL++STI RTDLPKV ++TALD ++L F + A ++E+A ++Y
Sbjct: 293 ASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVINY 351
>gi|426230044|ref|XP_004009093.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Ovis aries]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|348575247|ref|XP_003473401.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Cavia porcellus]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|149726124|ref|XP_001503421.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Equus caballus]
Length = 475
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|344265232|ref|XP_003404689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Loxodonta africana]
Length = 467
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|344265230|ref|XP_003404688.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Loxodonta africana]
Length = 475
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|189092755|gb|ACD75818.1| gamma-aminobutyric acid A receptor gamma 2 [Felis catus]
Length = 453
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 51 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 109
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 110 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 169
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 170 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 229
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 230 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 289
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 290 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 345
>gi|444518645|gb|ELV12281.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Tupaia chinensis]
Length = 467
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|351699570|gb|EHB02489.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial
[Heterocephalus glaber]
Length = 468
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 58 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 116
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 117 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 176
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E+++Y W + + QF F+
Sbjct: 177 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFV 236
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 237 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 296
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 297 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 352
>gi|449266636|gb|EMC77676.1| Gamma-aminobutyric acid receptor subunit gamma-4, partial [Columba
livia]
Length = 437
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 193/296 (65%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN+LLKNY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 30 DATQILNSLLKNYDNKLRPDIGI-KPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYD 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 89 RRLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPL+ SY YP E++VY W +S + QFDF
Sbjct: 149 LTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFT 208
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 209 GLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 268
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 269 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYL 324
>gi|226136|prf||1411303B GABA receptor alpha3
Length = 495
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 208/333 (62%), Gaps = 7/333 (2%)
Query: 142 DETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIK 201
DE K PK + + + ++ I T +L+ LL Y + P G T +K
Sbjct: 39 DEVKQDIGGLSPKHAPDIPDDSTDNITI---FTRILDRLLDGYDNRLRPGLGDAV-TEVK 94
Query: 202 TNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYIL 261
T++ + S GP+S+ DM+Y++D +FRQ W D RL F GP+ L L+ + KIW PDT+
Sbjct: 95 TDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFH 154
Query: 262 NGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAY 321
NGK+S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL GSYAY
Sbjct: 155 NGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAY 214
Query: 322 PIEKLVYHWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRH 378
++VY WT GK+ S G ++Q+D + + GE+ ++ +F+LKR
Sbjct: 215 TTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRK 274
Query: 379 RGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRY 438
GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV Y
Sbjct: 275 IGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAY 334
Query: 439 ATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
ATA+DWF+ + + + + ++EFA V+YFTK +
Sbjct: 335 ATAMDWFMAVCYAFVFSALIEFATVNYFTKRSW 367
>gi|189442719|gb|AAI67647.1| LOC100170583 protein [Xenopus (Silurana) tropicalis]
Length = 499
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T + T++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 92 TRILDRLLDGYDNRLRPGLGD-RVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQNWQDER 150
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP++ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRLT
Sbjct: 151 LRFKGPMHILRLNNLMANKIWTPDTFFHNGKKSIAHNMTMPNKLLRIQDDGTLLYTMRLT 210
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++ Y WT + S V G ++Q+ +
Sbjct: 211 VQAECPMHLEDFPMDAHACPLKFGSYAYTTSEVTYVWTRNATESVVVAPDGSRLNQYVLL 270
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 271 GHLVGKETIKSSTGEYTVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 330
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 331 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 388
>gi|296192689|ref|XP_002744182.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Callithrix jacchus]
Length = 467
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|327260685|ref|XP_003215164.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Anolis carolinensis]
Length = 474
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 206/344 (59%), Gaps = 11/344 (3%)
Query: 124 VLSMFSVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKN 183
V ++ L +G + DD+ + + TN+ ++ + E ++TL+LN LL+
Sbjct: 25 VRTLLLCSLIHGSSQKSDDDYEDYTTNKTWVLTPKIHES---------DVTLILNGLLEG 75
Query: 184 YQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNL 243
Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D RL F I L
Sbjct: 76 YDNKLRPDIGV-QPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLRFNSTIKVL 134
Query: 244 SLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLR 303
L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++RLTI A C + L
Sbjct: 135 RLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLH 194
Query: 304 NFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRR 362
NFPMD SCPL SY YP E+++Y W + + QF FI
Sbjct: 195 NFPMDEHSCPLAFSSYGYPKEEIIYMWKRSSVEVGDTRSWRLYQFSFIGLRNTTEVVPTT 254
Query: 363 EGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTL 422
G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A R LGITTVLT+
Sbjct: 255 SGDYVVMAVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTM 314
Query: 423 STISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
+T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 315 TTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
>gi|410914016|ref|XP_003970484.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Takifugu rubripes]
Length = 409
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 198/306 (64%), Gaps = 4/306 (1%)
Query: 159 LKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMD 218
L + ++ NIT +L+ LL Y + P G G T +KT++ + S GP+S+++M+
Sbjct: 22 LSDVSGNEKTTSDNITRILDRLLDGYDNRLRPGSGGGV-TEVKTDIFVTSFGPVSDVEME 80
Query: 219 YSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLL 278
Y+MD +FRQ W D RL F GP L L+ +M++KIW PDT+ N K+S H +T PNKL
Sbjct: 81 YTMDMFFRQMWVDERLKFEGPTEILRLNNRMVDKIWTPDTFFRNSKKSISHNMTTPNKLF 140
Query: 279 RINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF 338
RI ++G + Y+MRLTI A+CPM L +FPMD SCPL GSYAY ++++ W G S
Sbjct: 141 RIMKNGTVFYTMRLTITADCPMRLMDFPMDGHSCPLRFGSYAYTSSEIMFTWRKGPVASV 200
Query: 339 -VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
P +IS Q+D + + F+ G +S+ V+F+L+R GY++IQ Y+P +++VV
Sbjct: 201 DCPKESISLLQYDLVGQTLSSQIFRSNTGHYSVQVVHFHLQRKLGYYLIQTYIPLIMVVV 260
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFWI++E+ R GITTVLT++T+S+ +R LPKV YATA+DWF+ + F + +
Sbjct: 261 LSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYATAMDWFIAVCFAFVAS 320
Query: 456 TILEFA 461
+++ A
Sbjct: 321 ALIDSA 326
>gi|403287086|ref|XP_003934788.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 467
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|403287088|ref|XP_003934789.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 475
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|449475199|ref|XP_002189346.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Taeniopygia guttata]
Length = 490
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G +PTII T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 80 DVTLILNGLLEGYDNKLRPDIGV-KPTIIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 138
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 139 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 198
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E+++Y W + + QF F
Sbjct: 199 LTIDAECQLQLHNFPMDVHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFAFT 258
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V FNL R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 259 GLRNTTEVVKTTSGDYVVMSVFFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 318
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 319 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 374
>gi|296192687|ref|XP_002744181.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Callithrix jacchus]
Length = 475
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|62531075|gb|AAH93254.1| LOC553402 protein, partial [Danio rerio]
Length = 372
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 62 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 120
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 121 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 180
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 181 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSFV 240
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 241 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 300
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 301 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 356
>gi|147902924|ref|NP_001087431.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2 precursor
[Xenopus laevis]
gi|50925068|gb|AAH79777.1| MGC86282 protein [Xenopus laevis]
Length = 451
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T + T++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 44 TRILDRLLDGYDNRLRPGLGD-RVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQNWQDER 102
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP++ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI DG +LY+MRLT
Sbjct: 103 LRFKGPMHILRLNNLMANKIWTPDTFFHNGKKSIAHNMTMPNKLLRIQDDGTLLYTMRLT 162
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++ Y WT + S V G ++Q+ +
Sbjct: 163 VQAECPMHLEDFPMDAHACPLKFGSYAYTTSEVTYVWTRNATDSVVVAPDGSRLNQYVLL 222
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 223 GHLVGKETIKSSTGEYTVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 282
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 283 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 340
>gi|432900936|ref|XP_004076732.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Oryzias latipes]
Length = 458
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 196/299 (65%), Gaps = 6/299 (2%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEP-TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDS 232
T +L+ LL Y + P G GE T ++TN+ + S GP+S+ DM+Y++D +FRQ WRD
Sbjct: 41 TRILDRLLDGYDNRLRP--GLGETVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDE 98
Query: 233 RLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRL
Sbjct: 99 RLKFDGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRL 158
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDF 349
TI A CPM L +FPMD +CPL GSYAY +++Y WT G S G ++Q+D
Sbjct: 159 TIHAECPMHLEDFPMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVAVAEDGSRLNQYDL 218
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ T GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 219 LGHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVP 278
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 279 ARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTK 337
>gi|432895803|ref|XP_004076169.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oryzias latipes]
Length = 475
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T VLN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 64 DVTHVLNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 123 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 182
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 183 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYRWKRSSVEVGDIRSWRLYQFSFV 242
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 243 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 358
>gi|41152262|ref|NP_957025.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6a precursor
[Danio rerio]
gi|37589683|gb|AAH59508.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6a [Danio rerio]
Length = 395
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 202/309 (65%), Gaps = 8/309 (2%)
Query: 152 LPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP 211
L V+N + ++K + +NIT +L+ LL+ Y + P G T +KT++ + S GP
Sbjct: 10 LTSVTNVIGKQKINS----ENITRILDGLLEGYDNRLRPGSGVSV-TEVKTDIFVTSFGP 64
Query: 212 ISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
+S+++M+++MD +FRQ W D RL+F GPI L L+ +M++KIW PDT+ N ++S H +
Sbjct: 65 VSDVNMEFTMDMFFRQMWVDERLAFQGPIEILPLNNRMVDKIWTPDTFFRNARKSLAHNM 124
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
T PNKL RI Q+G + Y+MRLT+ A CPM LR+FPMD +CPL GSYAY ++VY W
Sbjct: 125 TSPNKLFRIMQNGTVFYTMRLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWR 184
Query: 332 PG--KSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYV 388
G S+ F P ++ Q+D + T+K G +S+ V+F L+R GY +IQ Y+
Sbjct: 185 KGLEASVDFPPESSSLLQYDLLGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYI 244
Query: 389 PCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLM 448
P +++VVLS VSFWI++E+ R GITTVLT++T+S+ +R+ LPK YATA+DWF+ +
Sbjct: 245 PLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARSSLPKASYATAMDWFIAV 304
Query: 449 SFFYCIATI 457
F + + +
Sbjct: 305 CFAFVASAL 313
>gi|312191376|gb|ADQ43742.1| gamma-aminobutyric acid A receptor subunit alpha-3 [Xenopus laevis]
Length = 368
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 195/292 (66%), Gaps = 4/292 (1%)
Query: 180 LLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGP 239
LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D RL F GP
Sbjct: 1 LLDGYDNRLRPGLGDSV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWLDERLKFDGP 59
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
I L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLTI A C
Sbjct: 60 IRTLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLIDNGTLLYTMRLTIHAECT 119
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVP-GMAISQFDFISSPKRN 356
M L +FPMD +CPL GSYAYP ++VY WT G KS++ P G ++Q+D +
Sbjct: 120 MHLEDFPMDVHACPLKFGSYAYPKTEVVYSWTNGSNKSVAVAPDGSRLNQYDLLGVAVGT 179
Query: 357 FTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGI 416
T + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+
Sbjct: 180 ETIRSSTGEYIVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGV 239
Query: 417 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 240 TTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTK 291
>gi|224043002|ref|XP_002197411.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Taeniopygia guttata]
Length = 446
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 190/302 (62%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ K G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTSEIVKTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|372266072|ref|NP_001243179.1| gamma-aminobutyric acid receptor subunit gamma-2 [Danio rerio]
Length = 476
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 124 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 184 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 359
>gi|126337124|ref|XP_001362811.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Monodelphis domestica]
Length = 466
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 189/303 (62%), Gaps = 2/303 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGL-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E++VY W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMVYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVKTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YPG 473
P
Sbjct: 345 KPN 347
>gi|351713212|gb|EHB16131.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Heterocephalus
glaber]
Length = 492
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 67 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 125
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 126 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 185
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 186 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNRSVEVAQDGSRLNQYDLL 245
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 246 GHVVGTEIIRSSTGEYVIMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 305
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 306 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 365
Query: 471 Y 471
+
Sbjct: 366 W 366
>gi|410989569|ref|XP_004001031.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Felis
catus]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|345320826|ref|XP_001521787.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ornithorhynchus anatinus]
Length = 513
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 202/328 (61%), Gaps = 11/328 (3%)
Query: 141 DDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTII 200
DD + W N S L K H+ ++TL+LN+LL++Y S P+ G PT+I
Sbjct: 88 DDRVDSGWNN-----SWVLALKAHHE----GDVTLILNSLLRDYDSKLRPDIGV-RPTVI 137
Query: 201 KTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYI 260
+T++ + S+GP+ I+M+YS+D F Q W D RL F G L L+ ++ KIW PDT+
Sbjct: 138 ETDVYVNSIGPVDPINMEYSIDIIFGQTWFDRRLRFPGSSKVLMLNSNVVGKIWVPDTFF 197
Query: 261 LNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYA 320
N ++S H +T PN+LLRI DG +LY++RLTI A C + LRNFPMD SCPL SY
Sbjct: 198 RNARKSDAHWVTTPNRLLRIRGDGRVLYTLRLTIAAECYLQLRNFPMDEHSCPLEFSSYG 257
Query: 321 YPIEKLVYHWTPGKSISFVPG-MAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHR 379
YP ++ Y W P ++QF F+ ++ + G++ ++ + F+L R
Sbjct: 258 YPQNEIEYKWKQTSVEVADPKYWRLNQFAFVGLRNSTEIWRTQSGDYVVMTIFFDLSRRM 317
Query: 380 GYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYA 439
G+F IQ Y+PC+L VVLSWVSFWI+++A R LGITTVLT++T+S +R LPKV Y
Sbjct: 318 GFFAIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYT 377
Query: 440 TALDWFLLMSFFYCIATILEFAAVHYFT 467
TA+D F+ + F + A ++EF A+HYF+
Sbjct: 378 TAMDLFVSVCFIFVFAALVEFGALHYFS 405
>gi|344299194|ref|XP_003421272.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Loxodonta africana]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEVIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|380811396|gb|AFE77573.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Macaca
mulatta]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|345328450|ref|XP_001514189.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Ornithorhynchus anatinus]
Length = 481
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 198/316 (62%), Gaps = 2/316 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN LL NY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 73 DATQILNTLLLNYDNKLRPDIGI-KPTYIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYD 131
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 132 RRLRFNSTLKALTLNSNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 191
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPLI SY YP E+++Y W +S + QFDF
Sbjct: 192 LTIEAECLLQLQNFPMDTHSCPLIFSSYGYPREEIIYRWRRYSIEVSDQRSWRLYQFDFT 251
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 252 GLRNTSEVLRTGAGDYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 311
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 312 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNK 371
Query: 471 YPGYPSGFIERLPVIG 486
P SG +LP G
Sbjct: 372 KPVEYSGRKPKLPPSG 387
>gi|190402684|gb|ACE77815.1| gamma-aminobutyric acid A receptor alpha 3 [Felis catus]
Length = 491
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|332245511|ref|XP_003271903.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Nomascus leucogenys]
gi|332245513|ref|XP_003271904.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Nomascus leucogenys]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|297305005|ref|XP_001099995.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Macaca mulatta]
gi|297711327|ref|XP_002832295.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Pongo abelii]
gi|297711329|ref|XP_002832296.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Pongo abelii]
gi|355705251|gb|EHH31176.1| hypothetical protein EGK_21055 [Macaca mulatta]
gi|355757790|gb|EHH61315.1| hypothetical protein EGM_19301 [Macaca fascicularis]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|301783743|ref|XP_002927287.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|313240835|emb|CBY33125.1| unnamed protein product [Oikopleura dioica]
Length = 428
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 214/333 (64%), Gaps = 25/333 (7%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
K ++ L+++L NY + P+ GK +P +++++ I GP+ + ++++D + RQ W
Sbjct: 14 AKEVSATLDSILLNYDNRLRPDIGK-KPLYVQSDVFITGFGPVDDQKREFTVDMFLRQKW 72
Query: 230 RDSRLSFMGPINNLS-LSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
+D RL++ ++ LS M+ +IW PD + NGK+S H +T+PN+LLRIN GDILY
Sbjct: 73 KDPRLAYQSVMSKSGDLSNVMINRIWTPDAFFRNGKKSVNHNMTLPNRLLRINATGDILY 132
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
+ RLTI+ANCPM++ NFPMD +C L GSY Y IE ++++WT ++ V +S++
Sbjct: 133 ASRLTIRANCPMTVTNFPMDVHTCNLTYGSYGYTIEDVIFNWTTKSNLG-VGRKKLSEW- 190
Query: 349 FISSPKRNFTFK-------------RREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
K+N TF + G++S+L ++F+LKRH GYF++Q Y+PC+LIV+
Sbjct: 191 ----IKKNCTFSNLHLKIYFKSCKDHQFGKYSVLIISFHLKRHLGYFIVQTYLPCMLIVI 246
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFW+++EAT R+ G+ TVL+L+T+S+ R +P V Y TA+DWF++ F YC A
Sbjct: 247 LSQVSFWVNKEATPARMVFGVMTVLSLTTLSISERRSIPNVSYLTAMDWFIVTCFTYCFA 306
Query: 456 TILEFAAVHYFTKLCYPGYPSGFIERLPVIGLD 488
++EFA+V+YFT + P I++L V G D
Sbjct: 307 ALIEFASVNYFTVI----RPRALIQQLEVNGND 335
>gi|348518924|ref|XP_003446981.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oreochromis niloticus]
Length = 472
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 61 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 240 GLRNTSEIVRTVSGDYVVLTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 355
>gi|118089523|ref|XP_420268.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Gallus
gallus]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 210/329 (63%), Gaps = 9/329 (2%)
Query: 151 RLPKVSNHLKEKKKHDLM--IGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNML 205
RL + + L +K D++ NIT+ +L+ LL Y + P G T +KT++
Sbjct: 42 RLGQPARRLSQKHVSDVVDDSKDNITIFTRILDRLLDGYDNRLRPGLGDSV-TEVKTDIY 100
Query: 206 IRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQ 265
+ S GP+S+ DM+Y++D +FRQ WRD RL F GP+ L L+ + KIW PDT+ NGK+
Sbjct: 101 VTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKK 160
Query: 266 SYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEK 325
S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL GSYAY +
Sbjct: 161 SVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKTE 220
Query: 326 LVYHWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYF 382
++Y WT GK S G ++Q+D + + GE+ ++ +F+LKR GYF
Sbjct: 221 VIYTWTLGKDKSVEVAKGGSRLNQYDLLGHVVGTEMVRSSTGEYVVMTTHFHLKRKIGYF 280
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
VIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+
Sbjct: 281 VIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAM 340
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTKLCY 471
DWF+ + + + + ++EFA V+YFTK +
Sbjct: 341 DWFIAVCYAFVFSALIEFATVNYFTKRSW 369
>gi|426257418|ref|XP_004022324.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Ovis
aries]
Length = 505
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 81 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 139
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 140 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 199
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 200 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 259
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 260 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 319
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 320 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 379
Query: 471 Y 471
+
Sbjct: 380 W 380
>gi|27806983|ref|NP_776967.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Bos
taurus]
gi|120759|sp|P10064.1|GBRA3_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|373|emb|CAA30925.1| unnamed protein product [Bos taurus]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|403305832|ref|XP_003943456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Saimiri boliviensis boliviensis]
Length = 492
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|189065479|dbj|BAG35318.1| unnamed protein product [Homo sapiens]
Length = 492
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|449266635|gb|EMC77675.1| Gamma-aminobutyric acid receptor subunit alpha-3, partial [Columba
livia]
Length = 443
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ WRD R
Sbjct: 21 TRILDRLLDGYDNRLRPGLGDSV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWRDER 79
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 80 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 139
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK S G ++Q+D +
Sbjct: 140 IHAECPMHLEDFPMDVHACPLKFGSYAYTKTEVIYTWTLGKDKSVEVAKGGSRLNQYDLL 199
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 200 GHVVGTEMVRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 259
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 260 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 319
Query: 471 Y 471
+
Sbjct: 320 W 320
>gi|395857172|ref|XP_003800980.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Otolemur garnettii]
Length = 492
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|327283448|ref|XP_003226453.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Anolis carolinensis]
Length = 458
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 193/297 (64%), Gaps = 2/297 (0%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+ T +LN LL+NY + P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W
Sbjct: 46 ADATRILNTLLQNYDNKLRPDVGI-KPTFIDVDIYVNSIGPVSVIHMEYTIDIFFAQTWY 104
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++
Sbjct: 105 DRRLRFNSSLQALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWSDGKVLYTL 164
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDF 349
RLTI+A C + L+NFPMDT SCPL+ SY YP E+++Y W +S + QFDF
Sbjct: 165 RLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIIYRWRRYSIEVSDQRTWRLYQFDF 224
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
I + + G++ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 225 IGLRNTSEVLRTGAGDYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTP 284
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 285 ARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYL 341
>gi|296471150|tpg|DAA13265.1| TPA: gamma-aminobutyric acid receptor subunit alpha-3 precursor
[Bos taurus]
gi|440911793|gb|ELR61428.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Bos grunniens
mutus]
Length = 492
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|57112927|ref|XP_549343.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Canis
lupus familiaris]
Length = 492
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|4557603|ref|NP_000799.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Homo
sapiens]
gi|397465573|ref|XP_003804565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Pan paniscus]
gi|397465575|ref|XP_003804566.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Pan paniscus]
gi|462149|sp|P34903.1|GBRA3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|386424|gb|AAB27279.1| gamma-aminobutyric acidA receptor alpha 3 subunit [Homo sapiens]
gi|10086250|gb|AAG12455.1| GABA receptor subunit alpha 3 [Homo sapiens]
gi|119619829|gb|EAW99423.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Homo sapiens]
Length = 492
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|47219236|emb|CAG11698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 58 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWFD 116
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 117 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 176
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + V + QF F+
Sbjct: 177 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDVRSWRLYQFSFV 236
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 237 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 296
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 297 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 352
>gi|334311173|ref|XP_001380042.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Monodelphis domestica]
Length = 497
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 87 DVTFILNGLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 145
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 146 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 205
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 206 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSVEVGDTRSWRLYQFSFV 265
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 266 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 325
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 326 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 381
>gi|47219235|emb|CAG11697.1| unnamed protein product [Tetraodon nigroviridis]
Length = 470
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 202/315 (64%), Gaps = 15/315 (4%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
K T +L++LL Y + P G+ T +KT++ + S+GP+S+ DM+Y++D +FRQ W+
Sbjct: 40 KVFTKILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWK 98
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI ++G +LY+M
Sbjct: 99 DERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTM 158
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQF 347
RLT++A CPM L +FPMD SCPL GSYAY ++VY WT + S V G ++Q+
Sbjct: 159 RLTVRAECPMHLEDFPMDAHSCPLKFGSYAYTRTEVVYVWTREAAQSVVVAEDGSRLNQY 218
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 219 DLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRES 278
Query: 408 TSDRIGLGITTV-----------LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
R G V LT++T+S+ +R LPKV YATA+DWF+ + + + +
Sbjct: 279 VPARTVFGPQQVYRNTFSRVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSA 338
Query: 457 ILEFAAVHYFTKLCY 471
++EFA V+YFTK Y
Sbjct: 339 LIEFATVNYFTKRGY 353
>gi|410915006|ref|XP_003970978.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Takifugu rubripes]
Length = 472
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 61 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 240 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 355
>gi|348551208|ref|XP_003461422.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Cavia porcellus]
Length = 491
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 67 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 125
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 126 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 185
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 186 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 245
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 246 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 305
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 306 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 365
Query: 471 Y 471
+
Sbjct: 366 W 366
>gi|468495|emb|CAA51991.1| GABA A/glycine receptor subunit [Haemonchus contortus]
Length = 472
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 202/314 (64%), Gaps = 13/314 (4%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
E+ ++ + T +LN +L N P + P ++ ++ +RSMGPISE DM++S
Sbjct: 24 ERSTYNTTLISYTTKLLNTILLNQDKKFRPTNPDSSPLNVEIDISVRSMGPISEQDMEFS 83
Query: 221 MDCYFRQYWRDSRLSFMGPINN----LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
+DCYFRQ W D RL+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN
Sbjct: 84 LDCYFRQKWLDRRLAFT-PINPDKPVMPLASKMLKDIWVPDTYIRNGRKSYLHTLTVPNI 142
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
L R+ DG + S RLTIK C M L+ FPMD Q+CP+ +GS Y +VY+W K +
Sbjct: 143 LFRVRSDGQVHVSQRLTIKTKCLMFLKKFPMDVQACPIEIGSLGYFSNDVVYYW---KDV 199
Query: 337 SFVPGMA--ISQFDFIS--SPKRNFTFKRREGE-FSLLQVNFNLKRHRGYFVIQVYVPCV 391
M +SQ+ + + NF+ R G S+L+V F L+R +GY+V+Q+Y PC
Sbjct: 200 ELDAKMGNMLSQYKILGLFKSEHNFSDHREIGRNISVLKVYFKLQRQQGYYVLQIYTPCT 259
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
L+VV+SWVSFWI++EA+ R+ LGI TVL++ST+ RTDLPKV ++TALD ++L F
Sbjct: 260 LLVVMSWVSFWINKEASPARVALGIMTVLSMSTLGFGLRTDLPKVSHSTALDIYILSCFG 319
Query: 452 YCIATILEFAAVHY 465
+ A ++E++ ++Y
Sbjct: 320 FVFAAMVEYSVINY 333
>gi|395505014|ref|XP_003756841.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sarcophilus harrisii]
Length = 475
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTFILNGLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|291410177|ref|XP_002721371.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 3-like
[Oryctolagus cuniculus]
Length = 492
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|17981007|gb|AAL50804.1|AF453437_1 GABAa receptor gamma2 subunit [Morone americana]
Length = 472
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 61 DVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG ILY++R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + + QF F+
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ +L V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 240 GLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYF
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYF 355
>gi|126342458|ref|XP_001376848.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Monodelphis domestica]
Length = 562
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 195/305 (63%), Gaps = 6/305 (1%)
Query: 163 KKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMD 222
+ HD + T +LN LLK+Y S P+ G +PT I ++ + S+GP+S I M+Y++D
Sbjct: 139 RAHD----TDATQILNTLLKDYDSKLRPDIGI-KPTNIDVDIYVNSIGPVSVIQMEYTID 193
Query: 223 CYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
+F Q W D RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI
Sbjct: 194 IFFAQSWYDRRLRFNSTLKALTLNSNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWN 253
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPG 341
DG +LY++RLTI+A C + L+NFPMDT SCPLI SY YP E++VY W +S
Sbjct: 254 DGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLIFSSYGYPAEEIVYRWRRYSIEVSDQRS 313
Query: 342 MAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSF 401
+ QFDF + + G++ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSF
Sbjct: 314 WRLYQFDFTGLRNTSEVLRTGAGDYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSF 373
Query: 402 WIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFA 461
WI R++T R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A
Sbjct: 374 WIKRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYVTAMDLFVSVCFIFVFAALIEYA 433
Query: 462 AVHYF 466
++Y
Sbjct: 434 TLNYL 438
>gi|395505016|ref|XP_003756842.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Sarcophilus harrisii]
Length = 467
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN LL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTFILNGLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
>gi|332861886|ref|XP_521313.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Pan
troglodytes]
Length = 504
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 190/296 (64%), Gaps = 4/296 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R GIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 307 RTVFGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNFL 362
>gi|37590803|gb|AAH59389.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
Length = 475
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 188/296 (63%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP E++VY W + + QF F+
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ + YF
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLRYF 359
>gi|363728960|ref|XP_001233421.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Gallus
gallus]
Length = 456
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 189/302 (62%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGL-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTSEIVNTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|380023906|ref|XP_003695750.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Apis florea]
Length = 303
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/154 (79%), Positives = 140/154 (90%)
Query: 168 MIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
++ +NIT+VL NLL NY++++ P HGKG PT++KTN+LIRSMGP+SE+DMDYSMDCYFRQ
Sbjct: 32 IVSRNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQ 91
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRDSRLSF+GPI +LSLSIKMLE+IWRPDTY NGK SYVHTITVPNKLLRI+QDGDIL
Sbjct: 92 SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDIL 151
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAY 321
YSMRLTIKA CPM LRNFPMD QSCPLILGSY+Y
Sbjct: 152 YSMRLTIKAKCPMELRNFPMDRQSCPLILGSYSY 185
>gi|327268066|ref|XP_003218819.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Anolis carolinensis]
Length = 466
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 207/346 (59%), Gaps = 12/346 (3%)
Query: 129 SVKLNNGYMKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSE 188
S +N K+ DD+ + TN+ + K HD ++TL+LN LL+ Y
Sbjct: 22 SFHVNCSSRKVEDDDFEDFTTNQ-----KWVMSPKTHD----TDVTLLLNKLLREYDKKL 72
Query: 189 PPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSI 247
P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W DSRL F + +L+L+
Sbjct: 73 RPDIGM-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKRSLTLNS 131
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
M+ IW PDT N K + H IT PN+LLRI DG ILY++RLTI A C + L NFPM
Sbjct: 132 NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPM 191
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEF 366
D SCPLI SY YP E+++Y W + + QFDF+ + + G++
Sbjct: 192 DKHSCPLIFSSYGYPQEEMIYRWRKNSVEAADQKSWRLYQFDFMGLRNTSDIVQTSAGDY 251
Query: 367 SLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTIS 426
++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI ++AT R LGITTVLT++T+S
Sbjct: 252 IVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLS 311
Query: 427 LDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCYP 472
+R LP+V Y TA+D F+ + F + A ++E+A ++Y++ P
Sbjct: 312 TIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKP 357
>gi|345324532|ref|XP_001505814.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Ornithorhynchus anatinus]
Length = 528
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/277 (45%), Positives = 188/277 (67%), Gaps = 3/277 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T ++T++ + S GP+S+ +M+Y++D +FRQ W+D RL F GP+ L L+ + KIW PD
Sbjct: 137 TQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPD 196
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T PNKLLR+ DG +LY+MRLTI A CPM L +FPMD +CPL G
Sbjct: 197 TFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFG 256
Query: 318 SYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SYAYP +++Y WT G + S V G ++Q+ + GE++++ +F+
Sbjct: 257 SYAYPNSEVIYIWTNGTAKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFH 316
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LP
Sbjct: 317 LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP 376
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
KV YATA+DWF+ + + + + ++EFA V+YFTK +
Sbjct: 377 KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW 413
>gi|395546001|ref|XP_003774883.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Sarcophilus harrisii]
Length = 597
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 192/296 (64%), Gaps = 2/296 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN LLK+Y S P+ G +PT I ++ + S+GP+S I M+Y++D +F Q W D
Sbjct: 47 DATQILNTLLKDYDSKLRPDIGI-KPTNIDVDIYVNSIGPVSVIQMEYTIDIFFAQSWYD 105
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F + L+L+ M+ +IW PDT+ N K++ H IT PN+LLRI DG +LY++R
Sbjct: 106 RRLRFNSTLKGLTLNSNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLR 165
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFI 350
LTI+A C + L+NFPMDT SCPLI SY YP E++VY W +S + QFDF
Sbjct: 166 LTIEAECLLQLQNFPMDTHSCPLIFSSYGYPAEEIVYRWRRYSIEVSDQRSWRLYQFDFT 225
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + G++ ++ V+F+L R GYF IQ Y+PC+L VVLSWVSFWI R++T
Sbjct: 226 GLRNTSEVLRTGAGDYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPA 285
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
R LGITTVLT++T+S SR LP+V Y TA+D F+ + F + A ++E+A ++Y
Sbjct: 286 RTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALIEYATLNYL 341
>gi|327283474|ref|XP_003226466.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-3-like [Anolis carolinensis]
Length = 474
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 7/329 (2%)
Query: 149 TNRLPKVSNHLKEKKKHDLM---IGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKT 202
T RL + + L +K D++ NIT+ +L+ LL Y + P G T +KT
Sbjct: 20 TPRLLRSARSLAQKHGPDIIDDDSKDNITIFTRILDRLLDGYDNRLRPGLGDAV-TEVKT 78
Query: 203 NMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILN 262
N+ + S GP+S+ DM+Y++D +FRQ RD RL F GP+ L L+ + KIW PDT+ N
Sbjct: 79 NIYVTSFGPVSDTDMEYTIDVFFRQSXRDERLKFDGPMKILPLNNLLASKIWTPDTFFHN 138
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
GK+S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL GSYAY
Sbjct: 139 GKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYT 198
Query: 323 IEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYF 382
+++Y WT GK G ++Q+D + + + G + ++ F+LKR GYF
Sbjct: 199 KTEVIYTWTLGKVEVAEGGSRLNQYDLLGHNVGRDSIESSTGTYIVMTTYFHLKRKIGYF 258
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
VIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+
Sbjct: 259 VIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAM 318
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTKLCY 471
DWF+ + + + + ++EFAAV+YFTK +
Sbjct: 319 DWFMAVCYAFVFSALIEFAAVNYFTKRSW 347
>gi|313224230|emb|CBY20019.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 209/333 (62%), Gaps = 29/333 (8%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
K ++ L+++L NY + P+ GK +P +++++ I GP+ + ++++D + RQ W
Sbjct: 14 AKEVSATLDSILLNYDNRLRPDIGK-KPLYVQSDVFITGFGPVDDQKREFTVDMFLRQKW 72
Query: 230 RDSRLSFMGPINNLS-LSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
+D RL++ ++ LS M+ +IW PD + NGK+S H +T+PN+LLRIN GDILY
Sbjct: 73 KDPRLAYQSVMSKSGDLSNVMINRIWTPDAFFRNGKKSVNHNMTLPNRLLRINATGDILY 132
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
+ RLTI+ANCPM++ NFPMD +C L GSY Y IE ++++WT I +
Sbjct: 133 ASRLTIRANCPMTVTNFPMDVHTCNLTYGSYGYTIEDVIFNWT----------TKIGRKK 182
Query: 349 FISSPKRNFTFK-------------RREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
K+N TF + G++S+L ++F+LKRH GYF++Q Y+PC+LIV+
Sbjct: 183 LSEWIKKNCTFSNLHLKIYFKSCKDHQFGKYSVLIISFHLKRHLGYFIVQTYLPCMLIVI 242
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LS VSFW+++EAT R+ G+ TVL+L+T+S+ R +P V Y TA+DWF++ F YC A
Sbjct: 243 LSQVSFWVNKEATPARMVFGVMTVLSLTTLSISERRSIPNVSYLTAMDWFIVTCFTYCFA 302
Query: 456 TILEFAAVHYFTKLCYPGYPSGFIERLPVIGLD 488
++EFA+V+YFT + P I++L V G D
Sbjct: 303 ALIEFASVNYFTVI----RPRALIQQLEVNGND 331
>gi|204206|gb|AAC42031.1| GABA-A receptor alpha-3 subunit [Rattus norvegicus]
Length = 493
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSMAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSITARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|149027091|gb|EDL82833.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Rattus
norvegicus]
Length = 557
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 132 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 190
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 191 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 250
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 251 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 310
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 311 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 370
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 371 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 430
Query: 471 Y 471
+
Sbjct: 431 W 431
>gi|402692006|ref|NP_058765.3| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Rattus
norvegicus]
Length = 493
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|326668762|ref|XP_001920261.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Danio rerio]
Length = 444
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 192/312 (61%), Gaps = 6/312 (1%)
Query: 157 NHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
N + K H+ + T +LNNLLK Y P+ G +PT+I ++ + S+GP+S I+
Sbjct: 30 NQMLAPKTHE----TDATQILNNLLKEYDKKLRPDIGV-KPTVIDVDIYVNSIGPVSSIN 84
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y +D F Q W DSRL + + L+L+ M+ IW PDT N K + H IT PN+
Sbjct: 85 MEYQIDIIFAQTWTDSRLRYNSTMKILTLNSNMVGLIWLPDTIFRNSKSADSHWITTPNQ 144
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-S 335
LLRI DG ILY++RLTI A C + L NFPMD SCPLI SY YP ++++Y W
Sbjct: 145 LLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPRDEMIYKWRRNSVQ 204
Query: 336 ISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
+ + QFDF+ K G++ ++ V F+L R GYF IQ Y+PC+L VV
Sbjct: 205 AADQKSWRLYQFDFMGLRNTTDVIKTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVV 264
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LSWVSFWI ++AT R LGITTVLT++T+S +RT LP+V Y TA+D F+ + F + A
Sbjct: 265 LSWVSFWIKKDATPARTALGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFA 324
Query: 456 TILEFAAVHYFT 467
++E+A ++Y++
Sbjct: 325 ALMEYATLNYYS 336
>gi|120761|sp|P20236.1|GBRA3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|56178|emb|CAA36247.1| GABA-A receptor [Rattus norvegicus]
Length = 493
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|426248632|ref|XP_004018064.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Ovis
aries]
Length = 475
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 54 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 112
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 113 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 172
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 173 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 232
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 233 GLRNTTEIVQTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 292
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 293 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 352
Query: 471 YP 472
P
Sbjct: 353 KP 354
>gi|348552638|ref|XP_003462134.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cavia porcellus]
Length = 630
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 188/303 (62%), Gaps = 2/303 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 209 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 267
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 268 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 327
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 328 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 387
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 388 GLRNTTETVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 447
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 448 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 507
Query: 471 YPG 473
P
Sbjct: 508 KPA 510
>gi|344298013|ref|XP_003420689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Loxodonta africana]
Length = 466
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 45 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 103
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
+RL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 104 TRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 163
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 164 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 223
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 224 GLRNTTETVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 283
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 284 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYS 340
>gi|296236667|ref|XP_002763418.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
3 [Callithrix jacchus]
Length = 493
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 198/302 (65%), Gaps = 5/302 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKML-EKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
L F GP+ L L+ +L KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRL
Sbjct: 127 LKFDGPMKILPLNNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRL 186
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDF 349
TI A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D
Sbjct: 187 TIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDL 246
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 LGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVP 306
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 ARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKR 366
Query: 470 CY 471
+
Sbjct: 367 SW 368
>gi|26333069|dbj|BAC30252.1| unnamed protein product [Mus musculus]
gi|74145296|dbj|BAE22270.1| unnamed protein product [Mus musculus]
gi|111307395|gb|AAI20687.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
gi|111601259|gb|AAI19318.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
Length = 492
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|47219407|emb|CAG01570.1| unnamed protein product [Tetraodon nigroviridis]
Length = 430
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 198/303 (65%), Gaps = 7/303 (2%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEP-TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDS 232
T +L+ LL Y + P G GE T ++TN+ + S GP+S DM+Y++D +FRQ WRD
Sbjct: 17 TRILDRLLDGYDNRLRP--GLGESVTEVRTNIYVTSFGPVSHTDMEYTIDVFFRQSWRDE 74
Query: 233 RLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR- 291
RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MR
Sbjct: 75 RLKFDGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRR 134
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFD 348
LTI A CPM L +FPMD+ +CPL GSYAY +++Y WT G IS G ++Q+D
Sbjct: 135 LTIHAECPMHLEDFPMDSHACPLKFGSYAYTNNEVIYKWTQGDEISVSVAEDGSRLNQYD 194
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ T GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 195 LLGHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESV 254
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 255 PARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTK 314
Query: 469 LCY 471
+
Sbjct: 315 RSW 317
>gi|194228379|ref|XP_001496783.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Equus caballus]
Length = 492
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 196/298 (65%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LP+V YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPEVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 364
>gi|247269171|ref|NP_032093.3| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Mus
musculus]
gi|120760|sp|P26049.1|GBRA3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|193391|gb|AAA37651.1| GABA-A receptor alpha-3 subunit [Mus musculus]
gi|148694613|gb|EDL26560.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
Length = 492
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 197/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|348525970|ref|XP_003450494.1| PREDICTED: hypothetical protein LOC100698500 [Oreochromis niloticus]
Length = 1418
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 198/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++TN+ + S GP+S+ DM+Y++D +FRQ WRD R
Sbjct: 1005 TRILDRLLDGYDNRLRPGLGESV-TEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDER 1063
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 1064 LKFDGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 1123
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVP-GMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT G +S++ G ++Q+D +
Sbjct: 1124 IHAECPMHLEDFPMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVAVAEDGSRLNQYDLL 1183
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 1184 GHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 1243
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 1244 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTK 1301
>gi|221272564|emb|CAP70067.1| GABAA receptor subunit alpha 4b [Carassius carassius]
Length = 265
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 178/260 (68%), Gaps = 4/260 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKM 249
P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D RL + GP+ L L+ M
Sbjct: 6 PGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYDGPVEILRLNNLM 64
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
+ K+W PDT+ NGK+S H +T PN+L RI ++G ILY+MRLTI A CPM L +FPMD
Sbjct: 65 VTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMKLVDFPMDG 124
Query: 310 QSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFISSPKRNFTFKRREGEF 366
SCPL GSYAYP ++VY WT P S+ P ++ Q+D I + T K GE+
Sbjct: 125 HSCPLKFGSYAYPKTEMVYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSITGEY 184
Query: 367 SLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTIS 426
++ V F+LKR GYF+IQ Y+PC++ V+LS VSFWI++E+ R GITTVLT++T+S
Sbjct: 185 VVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLS 244
Query: 427 LDSRTDLPKVRYATALDWFL 446
+ +R LPKV YATA+DWF+
Sbjct: 245 ISARHSLPKVSYATAMDWFI 264
>gi|194676758|ref|XP_001789268.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Bos
taurus]
Length = 495
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 188/302 (62%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 74 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 132
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 133 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 192
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 193 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 252
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 253 GLRNTTEIVQTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 312
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 313 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 372
Query: 471 YP 472
P
Sbjct: 373 KP 374
>gi|338729654|ref|XP_003365949.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Equus caballus]
Length = 516
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 196/298 (65%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 92 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 150
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 151 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 210
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 211 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 270
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 271 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 330
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LP+V YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 331 RTVFGVTTVLTMTTLSISARNSLPEVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 388
>gi|403306406|ref|XP_003943727.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Saimiri boliviensis boliviensis]
Length = 467
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWLPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|351699523|gb|EHB02442.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Heterocephalus
glaber]
Length = 463
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 196/298 (65%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T ++T++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++ T G + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVICLETNGSTKSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 346
>gi|312191374|gb|ADQ43741.1| gamma-aminobutyric acid A receptor subunit alpha-2 [Xenopus laevis]
Length = 380
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 197/298 (66%), Gaps = 4/298 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T + T++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 20 TRILDRLLDGYDNRLRPGLGD-RVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQNWQDER 78
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP++ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI D +LY+MRLT
Sbjct: 79 LRFKGPMHILRLNNLMANKIWTPDTFFHNGKKSIAHNMTMPNKLLRIQDDWTLLYTMRLT 138
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++ Y WT + S V G ++Q+ +
Sbjct: 139 VQAECPMHLEDFPMDAHACPLKFGSYAYTTSEVTYVWTRNATDSVVVAPDGSRLNQYVLL 198
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
T K GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 199 GHLVGKETIKSSTGEYTVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 258
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 259 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 316
>gi|20306952|gb|AAH28629.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Homo sapiens]
gi|123983186|gb|ABM83334.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [synthetic
construct]
gi|123997891|gb|ABM86547.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [synthetic
construct]
Length = 492
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 68 TRILDRLLDGYDNRLRPGLGDAV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 126
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G + Y+MRLT
Sbjct: 127 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLT 186
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S G ++Q+D +
Sbjct: 187 IHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLL 246
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 247 GHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 306
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 307 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 366
Query: 471 Y 471
+
Sbjct: 367 W 367
>gi|110347416|ref|NP_150092.2| gamma-aminobutyric acid receptor subunit gamma-3 isoform 1
precursor [Homo sapiens]
gi|13959689|sp|Q99928.2|GBRG3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|9802370|gb|AAF99698.1| GABAA receptor gamma 3 subunit [Homo sapiens]
gi|119578063|gb|EAW57659.1| gamma-aminobutyric acid (GABA) A receptor, gamma 3, isoform CRA_b
[Homo sapiens]
Length = 467
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|7530452|gb|AAF63215.1| GABAA receptor gamma 3 subunit [Homo sapiens]
Length = 449
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 28 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 86
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 87 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 146
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 147 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 206
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 207 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 266
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 267 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 326
Query: 471 YP 472
P
Sbjct: 327 KP 328
>gi|332247355|ref|XP_003272823.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Nomascus leucogenys]
Length = 467
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|1754749|gb|AAB39369.1| GABAA receptor gamma 3 subunit [Homo sapiens]
Length = 467
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|410960770|ref|XP_003986960.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Felis
catus]
Length = 475
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 186/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 54 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 112
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 113 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 172
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 173 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 232
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 233 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 292
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 293 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYS 349
>gi|345797984|ref|XP_545802.3| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Canis
lupus familiaris]
Length = 467
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 186/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYS 341
>gi|341880852|gb|EGT36787.1| hypothetical protein CAEBREN_18713 [Caenorhabditis brenneri]
Length = 498
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 202/313 (64%), Gaps = 23/313 (7%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T VL+ +L N + P + P ++ ++ +RSMGPISE +M++S+DCYFRQ W D R
Sbjct: 45 TKVLDTILLNQDKNFRPVNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRR 104
Query: 234 LSFMGPIN----NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
L+F PIN + L+ KML+ IW PDTYI NG++SY+HT+TVPN L R+ DG + S
Sbjct: 105 LAFT-PINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVS 163
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
RLTI++ C M L+ FPMDTQ+CP+ +GS Y + ++Y W + S + M +SQ+
Sbjct: 164 QRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVIYKWKEVELDSKMGNM-LSQYQV 222
Query: 350 ISSPK--RN---FTFKRRE------------GEFSLLQVNFNLKRHRGYFVIQVYVPCVL 392
+S K RN F F R + S+L V F L+R +GY+++Q+Y PC L
Sbjct: 223 LSLSKSERNVSDFRFSDRSEWRALRLQYPRFSDISVLNVYFKLQRQQGYYILQIYTPCTL 282
Query: 393 IVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFY 452
+VV+SWVSFWI++EA+ R+ LGI TVL++STI RTDLPKV ++TALD ++L F +
Sbjct: 283 VVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILSCFVF 342
Query: 453 CIATILEFAAVHY 465
A ++E+A ++Y
Sbjct: 343 LFAAMVEYAVINY 355
>gi|221272562|emb|CAP70066.1| GABAA receptor subunit alpha 4a [Carassius carassius]
Length = 265
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 178/260 (68%), Gaps = 4/260 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKM 249
P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W D RL + GP+ L L+ M
Sbjct: 6 PGFG-GPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYDGPVEILRLNNLM 64
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
+ K+W PDT+ NGK+S H +T PN+L RI ++G ILY+MRLTI A CPM L +FPMD
Sbjct: 65 VTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMRLVDFPMDG 124
Query: 310 QSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFISSPKRNFTFKRREGEF 366
SCPL GSYAYP +++Y WT P S+ P ++ Q+D I + T K GE+
Sbjct: 125 HSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSITGEY 184
Query: 367 SLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTIS 426
++ V F+LKR GYF+IQ Y+PC++ V+LS VSFWI++E+ R GITTVLT++T+S
Sbjct: 185 VVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLS 244
Query: 427 LDSRTDLPKVRYATALDWFL 446
+ +R LPKV YATA+DWF+
Sbjct: 245 ISARHSLPKVSYATAMDWFI 264
>gi|397515767|ref|XP_003828115.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Pan
paniscus]
Length = 475
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 187/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 54 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 112
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 113 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 172
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 173 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 232
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 233 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 292
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 293 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 352
Query: 471 YP 472
P
Sbjct: 353 KP 354
>gi|126342460|ref|XP_001376959.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Monodelphis domestica]
Length = 490
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 65 TRILDRLLDGYDNRLRPGLGD-TVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 123
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 124 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 183
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 184 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 243
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 244 GHVVGTEIIRSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 303
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 304 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 363
Query: 471 Y 471
+
Sbjct: 364 W 364
>gi|395545988|ref|XP_003774877.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 496
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 71 TRILDRLLDGYDNRLRPGLGDTV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 129
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 130 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 189
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 190 IHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 249
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 250 GHVVGTEIIRSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 309
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 310 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 369
Query: 471 Y 471
+
Sbjct: 370 W 370
>gi|149640085|ref|XP_001514229.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Ornithorhynchus anatinus]
Length = 495
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ W D R
Sbjct: 70 TRILDRLLDGYDNRLRPGLGD-TVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDER 128
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MRLT
Sbjct: 129 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 188
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAY +++Y WT GK+ S G ++Q+D +
Sbjct: 189 IHAECPMHLEDFPMDVHACPLKFGSYAYTKTEVIYSWTLGKNKSVEVAQDGSRLNQYDLL 248
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 249 GHVVGTEIIRSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 308
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 309 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 368
Query: 471 Y 471
+
Sbjct: 369 W 369
>gi|194206380|ref|XP_001494295.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Equus caballus]
Length = 562
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 186/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 141 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 199
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 200 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 259
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 260 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 319
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 320 GLKNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 379
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 380 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYS 436
>gi|444515640|gb|ELV10944.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Tupaia chinensis]
Length = 408
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 187/277 (67%), Gaps = 3/277 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T +KT++ + S GP+S+ DM+Y++D +FRQ W D RL F GP+ L L+ + KIW PD
Sbjct: 7 TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPD 66
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL G
Sbjct: 67 TFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFG 126
Query: 318 SYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SYAY ++VY WT GK+ S G ++Q+D + + GE+ ++ +F+
Sbjct: 127 SYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFH 186
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LP
Sbjct: 187 LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP 246
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
KV YATA+DWF+ + + + + ++EFA V+YFTK +
Sbjct: 247 KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW 283
>gi|312191378|gb|ADQ43743.1| gamma-aminobutyric acid A receptor subunit alpha-5 [Xenopus laevis]
Length = 299
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 187/280 (66%), Gaps = 4/280 (1%)
Query: 193 GKGEP-TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLE 251
G GE T +KT++ + S GP+S+ +M+Y++D +FRQ W+D RL F GP+ L L+ +
Sbjct: 5 GLGERITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFQGPMPRLPLNNLLAS 64
Query: 252 KIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQS 311
KIW PDT+ NGK+S H IT PNKLLR+ DG +LY+MRLTI A CPM L +FPMD +
Sbjct: 65 KIWTPDTFFHNGKKSIAHNITTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHA 124
Query: 312 CPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFISSPKRNFTFKRREGEFSL 368
CPL GSYAYP ++ Y WT S V G ++Q+ I GE+++
Sbjct: 125 CPLKFGSYAYPNSEVRYEWTNITDKSVVVAEDGSRLNQYHLIGQTVGTENISTSTGEYTV 184
Query: 369 LQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLD 428
+ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+
Sbjct: 185 MTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 244
Query: 429 SRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
+R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 245 ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 284
>gi|345307914|ref|XP_003428636.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 183/294 (62%), Gaps = 2/294 (0%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G +PT+I T+M + S+GP++ I+M+Y++D +F Q W D R
Sbjct: 56 TRILDRLLDGYDNRLRPGLGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRR 114
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F I L L+ M+ KIW PDT+ N K++ H IT PN++LRI DG +LY++RLT
Sbjct: 115 LKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 174
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISS 352
I A C + L NFPMD SCPL SY YP E+++Y W + + QF F+
Sbjct: 175 IDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFVGL 234
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
K G++ ++ V F+L R GYF IQ Y+PC LIVVLSWVSFWI+++A R
Sbjct: 235 RNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPART 294
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
LGITTVLT++T+S +R LPKV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 295 SLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 348
>gi|354488287|ref|XP_003506302.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cricetulus griseus]
Length = 451
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 186/303 (61%), Gaps = 2/303 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 30 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 88
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 89 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 148
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD +CPL SY YP E+++Y W + + QFDF+
Sbjct: 149 LTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 208
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 209 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 268
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 269 RTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 328
Query: 471 YPG 473
P
Sbjct: 329 KPA 331
>gi|56182|emb|CAA44930.1| GABA-A receptor gamma-3 subunit [Rattus norvegicus]
gi|228277|prf||1802276A GABA receptor A:SUBUNIT=gamma3
Length = 467
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD +CPL SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|117168291|ref|NP_032100.2| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Mus
musculus]
gi|408360111|sp|P27681.2|GBRG3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|148689916|gb|EDL21863.1| mCG141422 [Mus musculus]
gi|151555263|gb|AAI48536.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 3
[synthetic construct]
Length = 467
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD +CPL SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|40288195|ref|NP_077346.3| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Rattus
norvegicus]
gi|120790|sp|P28473.1|GBRG3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|204200|gb|AAA41181.1| GABA-alpha receptor gamma-3 subunit [Rattus norvegicus]
gi|149031472|gb|EDL86452.1| gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 [Rattus
norvegicus]
Length = 467
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD +CPL SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|354497422|ref|XP_003510819.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Cricetulus griseus]
Length = 455
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 186/274 (67%), Gaps = 3/274 (1%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T +KT++ + S GP+S+ DM+Y++D +FRQ W D RL F GP+ L L+ + KIW PD
Sbjct: 54 TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPD 113
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL G
Sbjct: 114 TFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFG 173
Query: 318 SYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SYAY +++Y WT GK+ S G ++Q+D + + GE+ ++ +F+
Sbjct: 174 SYAYTKAEVIYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFH 233
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LP
Sbjct: 234 LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP 293
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
KV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 294 KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 327
>gi|51122|emb|CAA41988.1| gamma subunit of GABA-alpha receptor [Mus musculus]
Length = 467
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 185/302 (61%), Gaps = 2/302 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 46 DATLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 104
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 105 SRLRFNSTMKTLTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 164
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD +CPL SY YP E+++Y W + + QFDF+
Sbjct: 165 LTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 224
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 225 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 284
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 285 RTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
Query: 471 YP 472
P
Sbjct: 345 KP 346
>gi|47214124|emb|CAG01382.1| unnamed protein product [Tetraodon nigroviridis]
Length = 472
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+ T +LN+LLK Y P+ G +PT++ ++ + S+GP+S I+M+Y +D F Q W D
Sbjct: 45 DTTEILNSLLKEYDKKLRPDIGV-KPTVVDVDIFVNSIGPVSSINMEYQIDIIFAQTWID 103
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL + + L+L+ M+ IW PDT N K + H IT+PN+LLRI DG ILY++R
Sbjct: 104 SRLRYNSTMKLLTLNSNMVGLIWLPDTIFRNSKTADSHWITMPNQLLRIWNDGKILYTLR 163
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL+ SY YP ++++Y W + + QFDF+
Sbjct: 164 LTINAECQLQLHNFPMDEHSCPLVFSSYGYPRDEMIYKWRKNSVEAADQKSWRLYQFDFM 223
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
K G++ ++ V F+L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 224 GLRNTTDIIKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 283
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +RT LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 284 RTALGITTVLTMTTLSSVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYS 340
>gi|449275750|gb|EMC84518.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Columba livia]
Length = 463
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 198/301 (65%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ +M+Y++D +FRQ W+D R
Sbjct: 50 TRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDER 108
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ DG +LY+MRLT
Sbjct: 109 LRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVP---GMAISQFDFI 350
I A CPM L +FPMD +CPL GSYAYP +++Y WT + S V G ++Q+ +
Sbjct: 169 ISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNTTTTSVVVAEDGSRLNQYHLM 228
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
GE++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 229 GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 288
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 289 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 348
Query: 471 Y 471
+
Sbjct: 349 W 349
>gi|348571655|ref|XP_003471611.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Cavia
porcellus]
Length = 393
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEIAHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|432941133|ref|XP_004082821.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oryzias latipes]
Length = 448
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 189/297 (63%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G PT+I+T + + S+GP+ I+M+Y++D +F Q W D
Sbjct: 45 DVTLILNKLLQGYDNKLRPDIGV-RPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYD 103
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLR+ +G ++Y++R
Sbjct: 104 SRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLR 163
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT-PGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP +++Y W ++ + QF F+
Sbjct: 164 LTINAECYLKLHNFPMDEHSCPLEFSSYGYPRNEIMYRWQRRAVEVADQRYWRLYQFAFV 223
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ + F+L R GYF IQ Y+PC +IVVLSWVSFWI+++A
Sbjct: 224 GMRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPA 283
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S SR LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 284 RTSLGITTVLTMTTLSTISRKSLPKVSYITAMDLFVSVCFIFTFAALMEYGTLHYFT 340
>gi|432118041|gb|ELK37978.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Myotis davidii]
Length = 484
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 203/319 (63%), Gaps = 15/319 (4%)
Query: 161 EKKKHDLMIGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDM 217
E+K D NIT+ +L+ LL+ Y P G+ T++ T++L+ S+GP+S+ M
Sbjct: 34 EEKTED-----NITMYTRILDGLLEGYDKRLRPGFGEWT-TVVNTDILVTSIGPVSDTQM 87
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W D RL F GPI +LSL+ M KIW PDTY N K+S VH T PNKL
Sbjct: 88 EYTIDVFFRQSWNDERLQFEGPIRSLSLNNMMAGKIWTPDTYFHNSKKSVVHNTTTPNKL 147
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-----TP 332
LR+ DG +LY+MRLTI A+CPM L NFPMD +C L GSYAY E++ Y W T
Sbjct: 148 LRLESDGTLLYTMRLTISADCPMQLYNFPMDEHTCSLKFGSYAYTSEEITYVWLDTNATN 207
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVL 392
G ++ G ++Q+ + + G F++L +F+LKR GYF+ Q Y+PC++
Sbjct: 208 GLDVA-EDGSRLTQYYLTGFETHSGSCSTSVGNFTVLTADFHLKRKLGYFLTQTYLPCIM 266
Query: 393 IVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFY 452
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YAT++DWF+ + +
Sbjct: 267 TVILSQVSFWVNRESVPARTVFGVTTVLTMTTLSISARNMLPKVSYATSMDWFIAVCHGF 326
Query: 453 CIATILEFAAVHYFTKLCY 471
+ ++EFA V+YFTK +
Sbjct: 327 VFSALIEFAIVNYFTKRSW 345
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%)
Query: 196 EPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWR 255
PT+I ++ + S+GP+S I+M+Y +D +F Q W DSRL F + L+L+ M+ IW
Sbjct: 375 RPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWI 434
Query: 256 PDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 435 PDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 470
>gi|197100468|ref|NP_001127403.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Pongo
abelii]
gi|55729175|emb|CAH91324.1| hypothetical protein [Pongo abelii]
Length = 465
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSSMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD +SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDERSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|426344234|ref|XP_004038679.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Gorilla gorilla gorilla]
Length = 443
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 41 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 99
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 100 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 159
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 160 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 219
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 220 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 279
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 280 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 336
>gi|239596170|gb|ACR83582.1| gamma-aminobutyric acid A receptor alpha 1 [Danio rerio]
Length = 287
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 189/276 (68%), Gaps = 4/276 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L++LL Y + P G+ T +KT++ + S+GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 10 TRILDSLLDGYDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDER 68
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI ++G +LY+MRLT
Sbjct: 69 LKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLT 128
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV---PGMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT G + S V G ++Q+D +
Sbjct: 129 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLM 188
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 189 GQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 248
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFL 446
R G+TTVLT++T+S+ +R LPKV YATA+DWF+
Sbjct: 249 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFI 284
>gi|326672928|ref|XP_684047.4| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Danio rerio]
Length = 432
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 189/298 (63%), Gaps = 4/298 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G PT+I+T + + S+GP+ I+M+Y++D +F Q W D
Sbjct: 32 DVTLILNKLLQGYDNKLRPDIGV-RPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYD 90
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLR+ +G ++Y++R
Sbjct: 91 SRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLR 150
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG--MAISQFDF 349
LTI A C + L NFPMD SCPL SY YP ++ Y W +S+ + QF F
Sbjct: 151 LTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRWQ-RRSVEVADQRYWRLYQFAF 209
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ + + GE+ ++ + F+L R GYF IQ Y+PC +IVVLSWVSFWI+++A
Sbjct: 210 VGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVP 269
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S SR LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 270 ARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFT 327
>gi|393909961|gb|EFO23429.2| hypothetical protein LOAG_05053 [Loa loa]
Length = 355
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 197/303 (65%), Gaps = 7/303 (2%)
Query: 172 NITLVLNN-LLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
NIT VL+ LLK + P N P ++ ++ +RS+GPISE M++SMDCYFRQ W
Sbjct: 38 NITQVLDTILLKQDRHFRPINGDSNVPLQVEIDISVRSIGPISEQKMEFSMDCYFRQKWL 97
Query: 231 DSRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
D RL+F G N+L +S KML IW PDTYI NG+ SY+HT+TVPN L R+ DG I
Sbjct: 98 DRRLAFDTFGNRNDLPISSKMLNDIWTPDTYIRNGRHSYLHTLTVPNVLFRVRHDGQIHV 157
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
S RLTI++ C M + FPMD Q+CP+ +GS Y + +VY W + S + M ++Q+
Sbjct: 158 SQRLTIRSRCKMFFKKFPMDCQACPIEIGSLGYFSKDIVYVWKDVELDSKMSNM-LAQYQ 216
Query: 349 FISSPKRNFTF---KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ K + + + S+L+V F L+R +G++++Q+Y PC LIVV+SWVSFWI++
Sbjct: 217 LLHVIKTSHNWTDPHDNKLNISVLKVYFKLQRQQGFYILQIYTPCTLIVVVSWVSFWINK 276
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E++ R+ LGI TVL++ST+ R+DLPKV ++TALD +++ F + A ++E+A ++Y
Sbjct: 277 ESSPARVSLGIMTVLSVSTLGFSYRSDLPKVSHSTALDIYIISCFGFVFAAVIEYAIINY 336
Query: 466 FTK 468
+
Sbjct: 337 VNR 339
>gi|355749252|gb|EHH53651.1| GABA(A) receptor subunit gamma-1 [Macaca fascicularis]
Length = 465
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|31742490|ref|NP_775807.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Homo
sapiens]
gi|114594945|ref|XP_526775.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 isoform
2 [Pan troglodytes]
gi|397490167|ref|XP_003816079.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Pan
paniscus]
gi|209572630|sp|Q8N1C3.2|GBRG1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|57999453|emb|CAI45936.1| hypothetical protein [Homo sapiens]
gi|119613427|gb|EAW93021.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|193783776|dbj|BAG53758.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|395843741|ref|XP_003794632.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Otolemur garnettii]
Length = 465
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|21411386|gb|AAH31087.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|123980146|gb|ABM81902.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
gi|123994949|gb|ABM85076.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
Length = 465
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|380786797|gb|AFE65274.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Macaca
mulatta]
Length = 465
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|332218612|ref|XP_003258448.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Nomascus leucogenys]
Length = 465
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|348541471|ref|XP_003458210.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oreochromis niloticus]
Length = 469
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 189/297 (63%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y + P+ G PT+I+T + + S+GP+ I+M+Y++D +F Q W D
Sbjct: 67 DVTLILNKLLQGYDNKLRPDIGV-RPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYD 125
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLR+ +G ++Y++R
Sbjct: 126 SRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSNAHWITTPNRLLRLWSNGRVMYTLR 185
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT-PGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP +++Y W ++ + QF F+
Sbjct: 186 LTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIMYQWQRRAVEVADQRYWRLYQFAFV 245
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ + F+L R GYF IQ Y+PC +IVVLSWVSFWI+++A
Sbjct: 246 GLRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPA 305
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S SR LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 306 RTSLGITTVLTMTTLSTISRKSLPKVSYITAMDLFVSVCFIFTFAALMEYGTLHYFT 362
>gi|402869278|ref|XP_003898690.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Papio
anubis]
Length = 465
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|26327955|dbj|BAC27718.1| unnamed protein product [Mus musculus]
Length = 465
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSEAHWITTPNRLLRIWSDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|403284721|ref|XP_003933706.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Saimiri boliviensis boliviensis]
Length = 465
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|354500345|ref|XP_003512261.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 1 [Cricetulus griseus]
Length = 464
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 62 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 120
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 121 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 180
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 181 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 240
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 241 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 300
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 301 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 357
>gi|281342940|gb|EFB18524.1| hypothetical protein PANDA_010715 [Ailuropoda melanoleuca]
Length = 430
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 28 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 86
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 87 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 146
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 147 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 206
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 207 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 266
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 267 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 323
>gi|350587477|ref|XP_003129000.3| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Sus scrofa]
Length = 430
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 28 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 86
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 87 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 146
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 147 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 206
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 207 GLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 266
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 267 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 323
>gi|5804939|emb|CAA38992.1| GABA(A) receptor gamma-1 subunit [Mus musculus]
Length = 465
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|149702782|ref|XP_001496252.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Equus caballus]
Length = 465
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLRGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|18034793|ref|NP_542153.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Rattus
norvegicus]
gi|120782|sp|P23574.1|GBRG1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|56176|emb|CAA40739.1| GABA(A) receptor gamma-1 subunit [Rattus norvegicus]
gi|149035305|gb|EDL90009.1| gamma-aminobutyric acid A receptor, gamma 1, isoform CRA_a [Rattus
norvegicus]
Length = 465
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|31542878|ref|NP_034382.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Mus
musculus]
gi|408360110|sp|Q9R0Y8.2|GBRG1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|26329877|dbj|BAC28677.1| unnamed protein product [Mus musculus]
gi|26338950|dbj|BAC33146.1| unnamed protein product [Mus musculus]
gi|26340688|dbj|BAC34006.1| unnamed protein product [Mus musculus]
gi|71534085|gb|AAH99939.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1 [Mus
musculus]
gi|74197291|dbj|BAE43302.1| unnamed protein product [Mus musculus]
gi|148705859|gb|EDL37806.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1, isoform
CRA_b [Mus musculus]
Length = 465
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|354500347|ref|XP_003512262.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 2 [Cricetulus griseus]
Length = 466
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 62 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 120
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 121 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 180
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 181 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 240
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 241 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 300
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 301 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 357
>gi|301772760|ref|XP_002921800.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ailuropoda melanoleuca]
Length = 465
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|344279191|ref|XP_003411374.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Loxodonta africana]
Length = 465
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|440908371|gb|ELR58393.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Bos grunniens
mutus]
Length = 465
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|426231653|ref|XP_004009853.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Ovis
aries]
Length = 465
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|155372219|ref|NP_001094720.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Bos
taurus]
gi|151553969|gb|AAI49938.1| GABRG1 protein [Bos taurus]
Length = 465
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|410906147|ref|XP_003966553.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Takifugu rubripes]
Length = 450
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 186/300 (62%), Gaps = 5/300 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
++ T+VLNNLLK Y + P+ G +PT+I + + S+GP+S IDM+Y +D F Q W
Sbjct: 45 EDATIVLNNLLKEYDKTLRPDIGV-KPTVIDVGIYVNSIGPVSSIDMEYQIDIIFAQSWV 103
Query: 231 DSRLSFMGP---INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
D+RL + + L+L+ M+ IW PDT N K + H IT PN+LLRI +G IL
Sbjct: 104 DTRLRYNSSSTTMPTLTLNSNMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIRNNGTIL 163
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQ 346
Y++R+TI A C + L NFPMD SCPL+ SY YP ++++Y W + S + Q
Sbjct: 164 YTLRMTINAECQLQLHNFPMDEHSCPLVFSSYGYPRDEIIYKWNRNSVATSDQKYWRLYQ 223
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
FDF+ GE+ L+ V F+L R GYF IQ Y+PC+L VVLSWVSFWI +
Sbjct: 224 FDFMGLRNTTDMLTTTAGEYVLMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKSD 283
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
AT R LGITTVLT++T+S +R LP+V Y TALD F+ + F + A ++E+A ++Y+
Sbjct: 284 ATPARTALGITTVLTMTTLSTVARNSLPRVSYVTALDLFVTVCFLFVFAAMIEYAMLNYY 343
>gi|297487872|ref|XP_002696562.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Bos
taurus]
gi|296475615|tpg|DAA17730.1| TPA: GABAA receptor gamma 3 subunit-like [Bos taurus]
Length = 481
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 181/293 (61%), Gaps = 2/293 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +PT+I ++ + S+GP+S I+M+Y +D +F Q W D
Sbjct: 74 DVTLILNKLLREYDKKLRPDIGI-KPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTD 132
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 133 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 192
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 193 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 252
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 253 GLRNTTEIVQTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 312
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAV 463
R LGITTVLT++T+S +R P+V Y TA+D F + F + A ++E+A +
Sbjct: 313 RTALGITTVLTMTTLSTIARNSWPRVSYVTAMDLFESVCFLFVFAALMEYATL 365
>gi|410957692|ref|XP_003985459.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Felis
catus]
Length = 465
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|359321100|ref|XP_003639504.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Canis lupus familiaris]
Length = 465
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|194389540|dbj|BAG61731.1| unnamed protein product [Homo sapiens]
Length = 419
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L +FPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHSFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|390340436|ref|XP_003725243.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 199/304 (65%), Gaps = 8/304 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +LN L+ Y + PN +G P I+++++ + S+GP+ EI+M++ +D +FRQ W D
Sbjct: 68 NISRILNELIDGYDRNLRPNI-RGPPVIVRSDIFVLSIGPVIEINMEFQVDMFFRQRWND 126
Query: 232 SRLSF-MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
RL F + + L L+ MLE IW PDTY NGK++ H++T PN++ RI+ +G+ILY+
Sbjct: 127 PRLKFNVTTFDELRLNTVMLETIWYPDTYFYNGKEAIKHSVTTPNRMFRISPEGNILYTS 186
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT---PGKS--ISFVPGMAIS 345
RLT+ A C M LR +PMDTQ CPL GS +Y E ++Y W P +S I + ++
Sbjct: 187 RLTVVAACMMDLRKYPMDTQVCPLSFGSNSYSEEDVIYAWKYPFPNESSAIDAADDLMLN 246
Query: 346 QFDFISSPKRN-FTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
QF+ + R+ R G ++L V F+L+RH G+F+IQ Y PCV+IV LSWVSFW++
Sbjct: 247 QFNLLGWEGRSHVKVSNRIGNRTVLTVEFSLERHIGFFLIQTYFPCVMIVALSWVSFWLN 306
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
REAT R+ LG T LT++T+ +R LPKV Y A+DWF+++ F + + ++EFA V+
Sbjct: 307 REATPARVALGTMTTLTITTLGWSARAVLPKVGYPKAIDWFIMLCFAFVLGAVIEFATVN 366
Query: 465 YFTK 468
YFTK
Sbjct: 367 YFTK 370
>gi|158260635|dbj|BAF82495.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 186/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y T +D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTTMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|348506864|ref|XP_003440977.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Oreochromis niloticus]
Length = 450
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 207/349 (59%), Gaps = 14/349 (4%)
Query: 124 VLSMFSVKLNNGY---MKIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNL 180
V+++F++ L G ++ D+ + H + N + + H ++ TL+LNNL
Sbjct: 6 VVTLFTLLLAGGARSDLREYGDDDEDHQDTTV----NQMLVPRSHQ----EDATLILNNL 57
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF-MGP 239
LK Y + P+ G+ +PT+I + I S+GP+S IDM+Y +D F Q W D+RL +
Sbjct: 58 LKEYDKTLRPDIGE-KPTVIDVGIYINSIGPVSSIDMEYQIDIIFAQTWVDTRLRYNSSS 116
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
+ L+L+ M+ IW PDT N K + H IT PN+LLRI +G ILY++R+TI A C
Sbjct: 117 MRILTLNSNMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIWNNGKILYTLRMTINAECQ 176
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFT 358
+ L NFPMD SCPLI SY YP +++VY W S + QFDF+
Sbjct: 177 LQLHNFPMDEHSCPLIFSSYGYPRDEIVYKWKRNSVETSDQKYWRLYQFDFMGLRNTTDV 236
Query: 359 FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
G++ L+ V F+L R GYF IQ Y+PC+L VVLSWVSFWI +AT R LGITT
Sbjct: 237 LTTTAGDYVLMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKSDATPARTALGITT 296
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
VLT++T+S +R +P+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 297 VLTMTTLSTVARNSIPRVSYVTAMDLFVTVCFMFVFAAMIEYAMLNYYS 345
>gi|351695952|gb|EHA98870.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Heterocephalus
glaber]
Length = 465
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDIYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI +G +LY++R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNNGRVLYTLR 181
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 242 GLRNSTEIAHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 358
>gi|350594449|ref|XP_003134134.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Sus scrofa]
Length = 406
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 194/305 (63%), Gaps = 7/305 (2%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP----ISEIDMDYSMDCYFRQYW 229
T +L+ LL Y + P G + L++ S+I +Y++D +FRQ W
Sbjct: 43 TRILDRLLDGYDNRLRPGLGDILVKFFTSTYLVKYSTVNSLLFSKITQEYTIDVFFRQSW 102
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
+D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+
Sbjct: 103 KDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYT 162
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQ 346
MRLT++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q
Sbjct: 163 MRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQ 222
Query: 347 FDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHRE 406
+D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE
Sbjct: 223 YDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 282
Query: 407 ATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YF
Sbjct: 283 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 342
Query: 467 TKLCY 471
TK Y
Sbjct: 343 TKRGY 347
>gi|149035304|gb|EDL90008.1| similar to Gamma-aminobutyric-acid receptor alpha-2 subunit
precursor (GABA(A) receptor) [Rattus norvegicus]
Length = 367
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 176/255 (69%), Gaps = 3/255 (1%)
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNK
Sbjct: 1 MEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNK 60
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGK 334
LLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 61 LLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASD 120
Query: 335 SISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 121 SVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMT 180
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 181 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 240
Query: 454 IATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 241 FSALIEFATVNYFTK 255
>gi|432849821|ref|XP_004066629.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Oryzias latipes]
Length = 450
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 187/299 (62%), Gaps = 3/299 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
++ TL+LNNLL+ Y + P+ G+ +PT+I + + S+GP+S IDM+Y +D F Q W
Sbjct: 45 EDATLILNNLLREYDKTLRPDIGE-KPTVINVGIYVNSIGPVSSIDMEYQIDIIFAQTWV 103
Query: 231 DSRLSF-MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D+RL + + L+L+ M+ IW PDT N K + H IT PN+LLRI +G ILY+
Sbjct: 104 DTRLRYNSSSMRILTLNSNMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIWNNGKILYT 163
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFD 348
+R+TI A C + L NFPMD SCPL+ SY YP ++++Y W S + QFD
Sbjct: 164 LRMTINAECQLQLHNFPMDEHSCPLVFSSYGYPRDEIIYKWKRNSVETSDQKYWRLYQFD 223
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
F+ G++ LL V F+L R GYF IQ Y+PC+L VVLSWVSFWI +AT
Sbjct: 224 FMGLRNTTDVLTTTAGDYVLLTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKSDAT 283
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 284 PARTALGITTVLTMTTLSTVARNSLPRVSYVTAMDLFVTVCFLFVFAAMIEYAMLNYYS 342
>gi|291385730|ref|XP_002709329.1| PREDICTED: gamma-aminobutyric acid A receptor, gamma 1 [Oryctolagus
cuniculus]
Length = 628
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 187/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
+IT +LN+LL+ Y + P+ G PT+I+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 226 DITQILNSLLQGYDNKLRPDIGV-RPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 284
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 285 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 344
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P ++ + QF F+
Sbjct: 345 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 404
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 405 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 464
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 465 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 521
>gi|334331365|ref|XP_001372541.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Monodelphis domestica]
Length = 571
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL+ Y + P+ G PTII+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 166 DVTHILNSLLQGYDNKLRPDIGV-RPTIIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 224
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 225 SRLRFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 284
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P + QF F+
Sbjct: 285 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFAFV 344
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 345 GLRNSTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 404
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 405 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 461
>gi|312075938|ref|XP_003140638.1| hypothetical protein LOAG_05053 [Loa loa]
Length = 514
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 201/320 (62%), Gaps = 17/320 (5%)
Query: 172 NITLVLNN-LLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
NIT VL+ LLK + P N P ++ ++ +RS+GPISE M++SMDCYFRQ W
Sbjct: 101 NITQVLDTILLKQDRHFRPINGDSNVPLQVEIDISVRSIGPISEQKMEFSMDCYFRQKWL 160
Query: 231 DSRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
D RL+F G N+L +S KML IW PDTYI NG+ SY+HT+TVPN L R+ DG I
Sbjct: 161 DRRLAFDTFGNRNDLPISSKMLNDIWTPDTYIRNGRHSYLHTLTVPNVLFRVRHDGQIHV 220
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
S RLTI++ C M + FPMD Q+CP+ +GS Y + +VY W + S + M ++Q+
Sbjct: 221 SQRLTIRSRCKMFFKKFPMDCQACPIEIGSLGYFSKDIVYVWKDVELDSKMSNM-LAQYQ 279
Query: 349 FISSPKRNFTF---KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ K + + + S+L+V F L+R +G++++Q+Y PC LIVV+SWVSFWI++
Sbjct: 280 LLHVIKTSHNWTDPHDNKLNISVLKVYFKLQRQQGFYILQIYTPCTLIVVVSWVSFWINK 339
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS----------FFYCIA 455
E++ R+ LGI TVL++ST+ R+DLPKV ++TALD ++++ F + A
Sbjct: 340 ESSPARVSLGIMTVLSVSTLGFSYRSDLPKVSHSTALDIYIMLGSVSEILFSSCFGFVFA 399
Query: 456 TILEFAAVHYFTKLCYPGYP 475
++E+A ++Y +K+ P
Sbjct: 400 AVIEYAIINYVSKIRISSKP 419
>gi|405957410|gb|EKC23622.1| hypothetical protein CGI_10013185 [Crassostrea gigas]
Length = 567
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 190/323 (58%), Gaps = 51/323 (15%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
W P SN + DL + +N+T++L+NLL+ Y S P G+ P +IKTNML+R
Sbjct: 193 WFYICPPRSNRFSD----DLTLRENVTILLDNLLQTYDKSVRP-AGRDGPLVIKTNMLVR 247
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGP-INNLSLSIKMLEKIWRPDTYILNGKQS 266
SMGPI+E +M YS+ CY RQ W D RL F P + ++LS L+ IW+P+TY LNG+ S
Sbjct: 248 SMGPITESEMTYSLQCYLRQSWHDERLKFDLPNVTEVTLSNTFLKDIWKPNTYFLNGRLS 307
Query: 267 YVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKL 326
ITVPN +RI +DG I S RLTI A CPM+L ++PMD CPL+L
Sbjct: 308 TQPNITVPNVFVRIRKDGSIYMSRRLTINAKCPMNLLDYPMDAPVCPLLLAG-------- 359
Query: 327 VYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQV 386
WT S L+V F+LKRH G+F++Q
Sbjct: 360 ---WTQ----------------------------------SGLEVYFHLKRHIGFFMLQT 382
Query: 387 YVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFL 446
Y+PC LIV LSWVSFWI+R+A R+ LG+TT+L+ + + L R LP+V YATALD FL
Sbjct: 383 YLPCTLIVCLSWVSFWINRDAAPARVLLGVTTILSTAAVGLIQRDGLPRVPYATALDVFL 442
Query: 447 LMSFFYCIATILEFAAVHYFTKL 469
+ FY +A I++++AV+YFTK+
Sbjct: 443 NVCIFYNLAAIIQYSAVNYFTKI 465
>gi|395542843|ref|XP_003773334.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Sarcophilus harrisii]
Length = 594
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++T +LN+LL+ Y + P+ G PTII+T++ + S+GP+ I+M+Y++D F Q W D
Sbjct: 189 DVTHILNSLLQGYDNKLRPDIGV-RPTIIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 247
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++R
Sbjct: 248 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 307
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFDFI 350
LTI A C + L NFPMD SCPL SY YP ++ Y W P + QF F+
Sbjct: 308 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFAFV 367
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 368 GLRNSTDISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 427
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 428 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALVEYGTLHYFT 484
>gi|403284719|ref|XP_003933705.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Saimiri boliviensis boliviensis]
Length = 456
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 175/254 (68%), Gaps = 3/254 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKL
Sbjct: 31 EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKL 90
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKS 335
LRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 91 LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDS 150
Query: 336 ISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 151 VQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTV 210
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 211 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 270
Query: 455 ATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 271 SALIEFATVNYFTK 284
>gi|296196628|ref|XP_002745923.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Callithrix jacchus]
Length = 456
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 175/254 (68%), Gaps = 3/254 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKL
Sbjct: 31 EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKL 90
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKS 335
LRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 91 LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDS 150
Query: 336 ISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 151 VQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTV 210
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 211 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 270
Query: 455 ATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 271 SALIEFATVNYFTK 284
>gi|332819976|ref|XP_517321.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Pan troglodytes]
gi|397490163|ref|XP_003816077.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Pan paniscus]
gi|221039502|dbj|BAH11514.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 175/254 (68%), Gaps = 3/254 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKL
Sbjct: 31 EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKL 90
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKS 335
LRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 91 LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDS 150
Query: 336 ISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 151 VQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTV 210
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 211 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 270
Query: 455 ATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 271 SALIEFATVNYFTK 284
>gi|402869286|ref|XP_003898694.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Papio anubis]
Length = 456
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 175/254 (68%), Gaps = 3/254 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKL
Sbjct: 31 EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKL 90
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKS 335
LRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 91 LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDS 150
Query: 336 ISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 151 VQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTV 210
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 211 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 270
Query: 455 ATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 271 SALIEFATVNYFTK 284
>gi|332218618|ref|XP_003258451.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Nomascus leucogenys]
Length = 456
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 175/254 (68%), Gaps = 3/254 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PNKL
Sbjct: 31 EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKL 90
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKS 335
LRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 91 LRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDS 150
Query: 336 ISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 151 VQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTV 210
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 211 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 270
Query: 455 ATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 271 SALIEFATVNYFTK 284
>gi|432098881|gb|ELK28376.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Myotis davidii]
Length = 497
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 189/326 (57%), Gaps = 32/326 (9%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDM-------------- 217
++T++LNNLL+ Y + P+ G +PT+I T+M + S+GP++ I+M
Sbjct: 65 DVTIILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMTANMEFNGEPSAMS 123
Query: 218 ----------------DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYIL 261
+Y++D +F Q W D RL F I L L+ M+ KIW PDT+
Sbjct: 124 YPSGNVVKCNEVWQQEEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFR 183
Query: 262 NGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAY 321
N K++ H IT PN++LRI DG +LY++RLTI A C + L NFPMD SCPL SY Y
Sbjct: 184 NSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGY 243
Query: 322 PIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRG 380
P E++VY W + + QF F+ K G++ ++ V F+L R G
Sbjct: 244 PREEIVYQWKRNSVEVGDTRSWRLYQFSFVGLRNTTDVVKTTSGDYVVMCVYFDLSRRMG 303
Query: 381 YFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYAT 440
YF IQ Y+PC LIVVLSWVSFWI+++A R LGITTVLT++T+S +R LPKV Y T
Sbjct: 304 YFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVT 363
Query: 441 ALDWFLLMSFFYCIATILEFAAVHYF 466
A+D F+ + F + + ++E+ +HYF
Sbjct: 364 AMDLFVSVCFIFVFSALVEYGTLHYF 389
>gi|194379246|dbj|BAG58174.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 178/258 (68%), Gaps = 3/258 (1%)
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L L+ M KIW PDT+ NGK+S H +T+PNK
Sbjct: 1 MEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNK 60
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGK 334
LLRI +DG +LY+MRLT++A CPM L +FPMD +CPL GSYAY ++VY WT P +
Sbjct: 61 LLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPAR 120
Query: 335 SISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S+ G ++Q+D + + + GE+ ++ +F+LKR GYFVIQ Y+PC++
Sbjct: 121 SVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMT 180
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 181 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 240
Query: 454 IATILEFAAVHYFTKLCY 471
+ ++EFA V+YFTK Y
Sbjct: 241 FSALIEFATVNYFTKRGY 258
>gi|327273670|ref|XP_003221603.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Anolis carolinensis]
Length = 449
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 184/296 (62%), Gaps = 2/296 (0%)
Query: 173 ITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDS 232
+T +LN+LL+ Y + P+ G TII+T++ + S+GP+ I+M+Y++D F Q W DS
Sbjct: 45 VTHILNSLLQGYDNKLRPDIGV-RTTIIETDVYVNSIGPVDPINMEYTIDIIFAQTWYDS 103
Query: 233 RLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
RL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY++RL
Sbjct: 104 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRL 163
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFDFIS 351
TI A C + L NFPMD SCPL SY YP ++VY W P + QF F+
Sbjct: 164 TINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIVYKWKKSSVEVADPKYWRLYQFAFVG 223
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
+ G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI+++A R
Sbjct: 224 LRNTMDISHTQSGDYVVMTIFFVLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 283
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 284 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 339
>gi|326919236|ref|XP_003205888.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Meleagris gallopavo]
Length = 453
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 185/299 (61%), Gaps = 2/299 (0%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
G ++T +L++LL+ Y + P+ G T+I+T++ + S+GP+ I+M+Y++D F Q W
Sbjct: 46 GGDVTHILDSLLQGYDNKLRPDIGV-RTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTW 104
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
DSRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY+
Sbjct: 105 YDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYT 164
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFD 348
+RLTI A C + L NFPMD SCPL SY YP ++ Y W P + QF
Sbjct: 165 LRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFA 224
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
F+ G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 225 FVGLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 284
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 285 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 343
>gi|291224453|ref|XP_002732218.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 3-like
[Saccoglossus kowalevskii]
Length = 1252
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 189/297 (63%), Gaps = 6/297 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NIT ++++LK Y PN G P ++ +M I SM ISE++MDY++ YFRQYW+D
Sbjct: 41 NITSTIDSILKTYDIRLRPNFGDS-PVTVEMDMDISSMNSISEVNMDYTLTMYFRQYWKD 99
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL++ N+S +M +IW PDTY +N K +++H +TV N+++R + DG +LY +R
Sbjct: 100 ERLAYDPRFGNISFDGRMANRIWVPDTYFVNDKHAFIHDVTVANRMIRFHYDGSVLYGLR 159
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF--D 348
+T +C M L ++P+D Q+C L + SY Y E + Y W G +S+ + + + QF +
Sbjct: 160 ITTVLSCMMDLHDYPLDVQNCTLEIESYGYTTEDVTYAWQYGNRSVQGLEDVQLPQFVLE 219
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
KR F G + L + F L+R G+F++Q Y+PC+LIV+LSWVSFWI+ EAT
Sbjct: 220 EYRLVKRQAAFS--TGSYPRLSLEFRLRRSVGFFILQTYLPCILIVMLSWVSFWINHEAT 277
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R LP++ Y A+D +L+ SF + A +LE+A V+Y
Sbjct: 278 SARVALGITTVLTMTTISTSVRASLPRISYIKAIDIYLVTSFAFVFAALLEYAIVNY 334
>gi|410960757|ref|XP_003986954.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Felis
catus]
Length = 371
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 173/255 (67%), Gaps = 3/255 (1%)
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNK
Sbjct: 1 MEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNK 60
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
LLR+ DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP ++VY WT G +
Sbjct: 61 LLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTK 120
Query: 337 SFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S V G ++Q+ + GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 121 SVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMT 180
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 181 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 240
Query: 454 IATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 241 FSALIEFATVNYFTK 255
>gi|118090560|ref|XP_420725.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Gallus
gallus]
Length = 464
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 185/299 (61%), Gaps = 2/299 (0%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
G ++T +L++LL+ Y + P+ G T+I+T++ + S+GP+ I+M+Y++D F Q W
Sbjct: 57 GGDVTHILDSLLQGYDNKLRPDIGV-RTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTW 115
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
DSRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY+
Sbjct: 116 YDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYT 175
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFD 348
+RLTI A C + L NFPMD SCPL SY YP ++ Y W P + QF
Sbjct: 176 LRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFA 235
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
F+ G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 236 FVGLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 295
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R LGITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 296 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 354
>gi|2695744|emb|CAA11024.1| gamma-aminobutyric acid A recptor, subunit alpha 6 [Mus musculus]
Length = 286
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 173/258 (67%), Gaps = 4/258 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 ENVYRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL R+ Q+G ILY+M
Sbjct: 89 DERLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K GE+ ++ V F+L+R GYF+IQ+Y PC++ V+LS VSFWI++E+
Sbjct: 209 DLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES 268
Query: 408 TSDRIGLGITTVLTLSTI 425
R GITTVLT++T+
Sbjct: 269 VPARTVFGITTVLTMTTL 286
>gi|354490880|ref|XP_003507584.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit gamma-2-like [Cricetulus griseus]
Length = 458
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 172/272 (63%), Gaps = 1/272 (0%)
Query: 196 EPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWR 255
+PT+I T+M + S+GP++ I+M+Y++D +F Q W D RL F I L L+ M+ KIW
Sbjct: 71 KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWI 130
Query: 256 PDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLI 315
PDT+ N K++ H IT PN++LRI DG +LY++RLTI A C + L NFPMD SCPL
Sbjct: 131 PDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLE 190
Query: 316 LGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFN 374
SY YP E++VY + + QF F+ K G++ ++ V F+
Sbjct: 191 FSSYGYPREEIVYQXKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFD 250
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
L R GYF IQ Y+PC LIVVLSWVSFWI+++A R LGITTVLT++T+S +R LP
Sbjct: 251 LSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLP 310
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
KV Y TA+D F+ + F + + ++E+ +HYF
Sbjct: 311 KVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 342
>gi|38491407|gb|AAR21858.1| GABA-beta subunit [Cooperia oncophora]
Length = 543
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 187/296 (63%), Gaps = 3/296 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N + +L +LL +Y P G G+ ++ +++I S ISE++MDY++ Y QYW D
Sbjct: 60 NASSLLADLLADYDIRLRPGFG-GDALLLTMDIIIASFDSISEVNMDYTITMYLHQYWTD 118
Query: 232 SRLSFMG--PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
RLS+ G PI+ ++LS + + IW PDT++ N K S++H +T NK+LRI+ DG I Y
Sbjct: 119 ERLSWGGSVPIDEMTLSGEFSQNIWVPDTFLANDKHSFLHEVTERNKMLRISVDGKIAYG 178
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
MRLT +C M+LRNFP+D+Q+C + + SY Y +++ W K++ V + + QF
Sbjct: 179 MRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMLWNRPKAVHGVEDVDVPQFTI 238
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ G + L + F L+R GYF+ Q Y+PCVLIV+LSWVSFWI+ EATS
Sbjct: 239 TGYQTEDRVVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATS 298
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LGITTVLT++TIS R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 299 ARVALGITTVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFVFVFAALLEYAAVNY 354
>gi|449500869|ref|XP_002194402.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Taeniopygia guttata]
Length = 564
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 184/299 (61%), Gaps = 2/299 (0%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
G ++T +L++LL+ Y + P+ G T+I+T++ + S+GP+ I+M+Y++D F Q W
Sbjct: 157 GGDVTHILDSLLQGYDNKLRPDIGV-RTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTW 215
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
DSRL F + L L+ M+ KIW PDT+ N ++S H IT PN+LLRI DG +LY+
Sbjct: 216 YDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYT 275
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPG-MAISQFD 348
+RLTI A C + L NFPMD SCPL SY YP ++ Y W P + QF
Sbjct: 276 LRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFA 335
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
F+ G++ ++ + F+L R GYF IQ Y+PC+L VVLSWVSFWI+++A
Sbjct: 336 FVGLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 395
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
R L ITTVLT++T+S +R LPKV Y TA+D F+ + F + A ++E+ +HYFT
Sbjct: 396 PARTSLEITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT 454
>gi|391329925|ref|XP_003739417.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 556
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 187/303 (61%), Gaps = 5/303 (1%)
Query: 170 GKNITLVLNNL-LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
G+N++L+L+N ++ Y PN+G G P + M I S+ +SE+ MD++ D YFRQ
Sbjct: 20 GRNVSLILDNFFIRGYDKRVRPNYG-GLPVDVGVTMQIISISTVSEVQMDFTSDFYFRQR 78
Query: 229 WRDSRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
WRD RLSF + + ++++ ++ EKIW PDT+ N K +Y HT T PN LRI+ +GD+
Sbjct: 79 WRDERLSFAKLPDLESMTVGAEVAEKIWVPDTFFANEKSAYFHTATTPNTFLRISHNGDV 138
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAIS 345
L S+RLT+ A+CPM LR FPMD QSC + + S+ Y ++ + Y W+ G KS+ + +
Sbjct: 139 LRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMKDISYRWSEGEKSVRISKEVELP 198
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QF + +R+ G +S L R GY++IQ+Y+P LIVV+SWVSFW+HR
Sbjct: 199 QFKVLGHSQRSKAVVLSTGNYSRLVCEIRFVRSMGYYLIQIYIPAGLIVVISWVSFWLHR 258
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
AT R+ LG+TTV T++T+ + LPK+ Y ++D +L F A++LE+A V Y
Sbjct: 259 NATPARVALGVTTVSTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 318
Query: 466 FTK 468
K
Sbjct: 319 LGK 321
>gi|449499244|ref|XP_004176531.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-3-like [Taeniopygia guttata]
Length = 548
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 191/301 (63%), Gaps = 4/301 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G T +KT++ + S GP+S+ DM+Y++D +FRQ WRD R
Sbjct: 126 TRILDRLLDGYDNRLRPGLGDSV-TEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWRDER 184
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ + KIW PDT+ NGK+S H +T PNKLLR+ +G +LY+MR T
Sbjct: 185 LKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRXT 244
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF---VPGMAISQFDFI 350
A P+ L P D+ CPL GSYAY +++Y WT GK S G ++Q+D +
Sbjct: 245 CSAKSPLQLEKTPKDSNVCPLTAGSYAYTKTEVIYTWTLGKDKSVEVAKGGSRLNQYDLL 304
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 305 GHVVGTEMVRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 364
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 365 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS 424
Query: 471 Y 471
+
Sbjct: 425 W 425
>gi|402911763|ref|XP_003918476.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Papio
anubis]
Length = 391
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 177/266 (66%), Gaps = 3/266 (1%)
Query: 209 MGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYV 268
MG +S D +Y++D +FRQ W D RL F GP+ L L+ + KIW PDT+ NGK+S
Sbjct: 1 MGSLSSRDKEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVA 60
Query: 269 HTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVY 328
H +T PNKLLR+ +G +LY+MRLTI A CPM L +FPMD +CPL GSYAY ++VY
Sbjct: 61 HNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVY 120
Query: 329 HWTPGKSISF---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQ 385
WT GK+ S G ++Q+D + + GE+ ++ +F+LKR GYFVIQ
Sbjct: 121 SWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQ 180
Query: 386 VYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWF 445
Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF
Sbjct: 181 TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWF 240
Query: 446 LLMSFFYCIATILEFAAVHYFTKLCY 471
+ + + + + ++EFA V+YFTK +
Sbjct: 241 IAVCYAFVFSALIEFATVNYFTKRSW 266
>gi|31631|emb|CAA31925.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 194/303 (64%), Gaps = 19/303 (6%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W+D R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT++ PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFM-------------PNKLLRITEDGTLLYTMRLT 148
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P S+ G ++Q+D +
Sbjct: 149 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPAHSVVVAEDGSRLNQYDLL 208
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 209 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 268
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATAL--DWFLLMSFFYCIATILEFAAVHYFTK 468
R G+TTVLT++T+S+ +R LPKV YATA+ DWF+ + + + + ++EFA V+YFTK
Sbjct: 269 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWDWFIAVCYAFVFSALIEFATVNYFTK 328
Query: 469 LCY 471
Y
Sbjct: 329 RGY 331
>gi|194376876|dbj|BAG57584.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 172/255 (67%), Gaps = 3/255 (1%)
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D +FRQ W+D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNK
Sbjct: 1 MEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNK 60
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSI 336
LLR+ DG +LY+MRLTI A CPM L +F MD +CPL GSYAYP ++VY WT G +
Sbjct: 61 LLRLEDDGTLLYTMRLTISAECPMQLEDFLMDAHACPLKFGSYAYPNSEVVYVWTNGSTK 120
Query: 337 SFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
S V G ++Q+ + GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 121 SVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMT 180
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 181 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 240
Query: 454 IATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 241 FSALIEFATVNYFTK 255
>gi|47212408|emb|CAF92023.1| unnamed protein product [Tetraodon nigroviridis]
Length = 415
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 29/283 (10%)
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T +KTN+ + S GP+S+ DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PD
Sbjct: 36 TEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFNGPMNILPLNNLMASKIWTPD 95
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ NGK+S H +T+PNKLLRI DG +LY+MRLT+ A CPM L +FPMD SCPL G
Sbjct: 96 TFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFG 155
Query: 318 SYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRR------------EGE 365
S A G ++ ++ + KR TF GE
Sbjct: 156 SCAS-----------------TSGCSVKKWAIMRPKKRTNTFNENNTEGYLTLNNLSAGE 198
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+ R G+TTVLT++T+
Sbjct: 199 YTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL 258
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 259 SISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK 301
>gi|392355603|ref|XP_003752086.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Rattus
norvegicus]
Length = 452
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|354482211|ref|XP_003503293.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Cricetulus griseus]
Length = 452
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|194389092|dbj|BAG61563.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 166/264 (62%), Gaps = 1/264 (0%)
Query: 204 MLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNG 263
M + S+GP++ I+M+Y++D +F Q W D RL F I L L+ M+ KIW PDT+ N
Sbjct: 1 MYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNS 60
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K++ H IT PN++LRI DG +LY++RLTI A C + L NFPMD SCPL SY YP
Sbjct: 61 KKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPR 120
Query: 324 EKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYF 382
E++VY W + + QF F+ K G++ ++ V F+L R GYF
Sbjct: 121 EEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYF 180
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
IQ Y+PC LIVVLSWVSFWI+++A R LGITTVLT++T+S +R LPKV Y TA+
Sbjct: 181 TIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAM 240
Query: 443 DWFLLMSFFYCIATILEFAAVHYF 466
D F+ + F + + ++E+ +HYF
Sbjct: 241 DLFVSVCFIFVFSALVEYGTLHYF 264
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 183/290 (63%), Gaps = 2/290 (0%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPI 240
++ Y + P G G P ++ ++ + S+ +SE+DMDY++ + R+YWRD RL F
Sbjct: 4 VRGYDRNFRPGFG-GPPLLVDMSLSVASIDRVSEVDMDYTLTIFLREYWRDERLHFSETN 62
Query: 241 NNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPM 300
+LSL +++E++W PDT+++N K S++H +TV N+LLR+ DG +LY +R+T KA CPM
Sbjct: 63 RSLSLDGRLVERLWVPDTFLVNAKSSFLHKVTVDNRLLRLFPDGRLLYGLRITAKAACPM 122
Query: 301 SLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKRNFTF 359
LR +P+D Q+CPL SY Y E + + W G +SI + + ++QF +
Sbjct: 123 DLRKYPLDVQTCPLQFESYGYTTEDIRFKWKDGNESIHGLERIELAQFWVGEHEVSDEVQ 182
Query: 360 KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
K GE+ L + F L R+ YF++Q Y+P L+VVLSWVSFWI+ EA R+ LGITTV
Sbjct: 183 KYETGEYPRLTIRFKLYRNIMYFILQTYLPATLLVVLSWVSFWINHEAVPARVALGITTV 242
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
LT++T +R LPK+ Y A+D + +M F + A +LE+AAV+Y + +
Sbjct: 243 LTMTTFITSARDSLPKISYIKAIDVYCVMCFLFVFAALLEYAAVNYHSSV 292
>gi|148708798|gb|EDL40745.1| glycine receptor, alpha 2 subunit, isoform CRA_a [Mus musculus]
Length = 470
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 37 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 95
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 96 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 155
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 156 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 215
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 216 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 275
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 276 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 335
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 336 DIWMAVCLLFVFAALLEYAAVNFVSR 361
>gi|6980952|ref|NP_036700.1| glycine receptor subunit alpha-2 precursor [Rattus norvegicus]
gi|392355605|ref|XP_003752087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Rattus
norvegicus]
gi|56744|emb|CAA40549.1| neonatal type of glycine receptor [Rattus norvegicus]
gi|288345|emb|CAA43471.1| inhibitory glycine receptor alpha 2A subunit [Rattus norvegicus]
gi|13548661|emb|CAC35981.1| glycine receptor alpha 2 precursor [Rattus norvegicus]
gi|149035866|gb|EDL90533.1| rCG49701, isoform CRA_b [Rattus norvegicus]
gi|227683|prf||1709209A Gly receptor subtype
Length = 452
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|34556195|ref|NP_906272.1| glycine receptor subunit alpha-2 precursor [Mus musculus]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|33604080|gb|AAH56342.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|46362565|gb|AAH68987.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|74228154|dbj|BAE23962.1| unnamed protein product [Mus musculus]
Length = 452
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|354482213|ref|XP_003503294.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Cricetulus griseus]
Length = 452
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|391346291|ref|XP_003747411.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Metaseiulus occidentalis]
Length = 499
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 186/302 (61%), Gaps = 12/302 (3%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+NIT +L N+L Y PN G G+P I ++LI S ISE++MDY++ Y QYW
Sbjct: 44 ENITDILKNILNGYDIRLRPNFG-GKPLYIGMDLLIASFDSISEVNMDYTITLYLNQYWV 102
Query: 231 DSRLSFMGPINN---LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
D RL+F N L+LS EKIW PDT+ N K S++H +T NK++R+ DG I
Sbjct: 103 DERLAFSSSEQNSQELTLSGDFAEKIWVPDTFFANDKNSFLHDVTEKNKMVRLKSDGHIT 162
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQF 347
Y MR T C M L +P+D Q+C + + SY Y ++++V +W + V + QF
Sbjct: 163 YGMRFTTTLACMMDLHYYPLDAQNCTVEIESYGYTVDEVVMYWKQPNPVGGVDSSELPQF 222
Query: 348 DFISSPKRNFTFKRRE----GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWI 403
+ R+ T R+E G + L ++F LKR+ GYF+ Q Y+P +LIV+LSWVSFWI
Sbjct: 223 SIV----RHETTDRKESLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWI 278
Query: 404 HREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAV 463
+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV
Sbjct: 279 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 338
Query: 464 HY 465
+Y
Sbjct: 339 NY 340
>gi|395837964|ref|XP_003791898.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Otolemur
garnettii]
Length = 453
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NHL+ K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHLRTAYCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|395526936|ref|XP_003765610.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Sarcophilus
harrisii]
Length = 452
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 197/326 (60%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGK------NITLVLNNLL---KNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK + + L+ L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKPPSQSMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|121579|sp|P22771.1|GLRA2_RAT RecName: Full=Glycine receptor subunit alpha-2; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
Length = 452
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|157954037|ref|NP_001103251.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
gi|156447611|gb|ABU63598.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006356|gb|EFA02804.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
Length = 480
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 184/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ LL+ Y PN G GEP ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 33 ENVTQTISRLLEGYDIRLRPNFG-GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 91
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R+N DG I Y M
Sbjct: 92 DERLAFSNEEEILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGAITYGM 151
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 152 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRG---VEEAELPQFT 208
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + + G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 209 IIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 268
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 269 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 325
>gi|126336874|ref|XP_001364595.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Monodelphis
domestica]
Length = 452
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 197/326 (60%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGK------NITLVLNNLL---KNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + + L+ L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKPPSQSMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ +SQF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLSQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|395526938|ref|XP_003765611.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Sarcophilus
harrisii]
Length = 452
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 197/326 (60%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGK------NITLVLNNLL---KNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK + + L+ L+ Y + PN KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKPPSQSMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|395837966|ref|XP_003791899.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Otolemur
garnettii]
Length = 453
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NHL+ K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHLRTAYCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|348554549|ref|XP_003463088.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Cavia
porcellus]
Length = 452
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDTRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|344288591|ref|XP_003416031.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Loxodonta
africana]
Length = 452
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAVCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|403255310|ref|XP_003920384.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 193/327 (59%), Gaps = 14/327 (4%)
Query: 155 VSNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTN 203
+NH + K HD GK + L+ Y + PN KG P + N
Sbjct: 18 ATNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCN 76
Query: 204 MLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILN 262
+ I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 77 IFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFAN 136
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y
Sbjct: 137 EKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYT 196
Query: 323 IEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGY 381
+ L++ W + G+ + QF + + K G+F+ ++V F+L+R GY
Sbjct: 197 MNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGY 256
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A
Sbjct: 257 YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKA 316
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTK 468
+D ++ + + A +LE+AAV++ ++
Sbjct: 317 IDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|296234942|ref|XP_002762679.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Callithrix
jacchus]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 193/327 (59%), Gaps = 14/327 (4%)
Query: 155 VSNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTN 203
+NH + K HD GK + L+ Y + PN KG P + N
Sbjct: 18 ATNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCN 76
Query: 204 MLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILN 262
+ I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 77 IFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFAN 136
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y
Sbjct: 137 EKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYT 196
Query: 323 IEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGY 381
+ L++ W + G+ + QF + + K G+F+ ++V F+L+R GY
Sbjct: 197 MNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGY 256
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A
Sbjct: 257 YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKA 316
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTK 468
+D ++ + + A +LE+AAV++ ++
Sbjct: 317 IDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|260812521|ref|XP_002600969.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
gi|229286259|gb|EEN56981.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
Length = 380
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 197/315 (62%), Gaps = 2/315 (0%)
Query: 152 LPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP 211
P V L E++ + N+T + +L Y P+ G+P +I ++ I S+
Sbjct: 5 FPVVRTRLTEEEVEEYQRLANVTETVRGILHGYDIRLRPDFA-GDPLVIGMSIEIASIDS 63
Query: 212 ISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
ISE++MDY+M YF+Q WRD RLS+ +NL+L ++ E IW PDTY LN K+SY+H +
Sbjct: 64 ISEVNMDYTMTMYFQQTWRDPRLSYTSVPHNLTLDGRVAESIWVPDTYFLNDKESYLHGV 123
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
TV N++LR++ DG +LY +R+T A C M+LR +P+D Q+C L + SY Y + L +HW
Sbjct: 124 TVKNRMLRLHHDGSVLYGLRITTTAACQMNLRRYPLDEQNCTLEIESYGYTTDDLEFHWK 183
Query: 332 PGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
GK ++ + + QFD + + G + L ++F LKR+ GYF++Q Y+P
Sbjct: 184 DGKDAVIGWDQIELPQFDIVDYNVEQKVIQFSTGAYPRLSLSFRLKRNIGYFMLQTYMPS 243
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
VLIV+LSWVSFWI+ EAT+ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F
Sbjct: 244 VLIVILSWVSFWINPEATAARVALGITTVLTVTTINTSVRASLPKISYVKAIDLYLMGCF 303
Query: 451 FYCIATILEFAAVHY 465
+ A ++E+A V+Y
Sbjct: 304 VFVFAALIEYAVVNY 318
>gi|300798570|ref|NP_001179843.1| glycine receptor subunit alpha-2 precursor [Bos taurus]
gi|296470482|tpg|DAA12597.1| TPA: glycine receptor, alpha 2-like isoform 1 [Bos taurus]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|344298009|ref|XP_003420687.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Loxodonta africana]
Length = 474
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 200/321 (62%), Gaps = 9/321 (2%)
Query: 148 WTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIR 207
WT + + H E+ ++ K ++ LLK Y P+ G G P + N+ I
Sbjct: 16 WTLGIQGLEPHSGERIPGNMSFVKE---TVDKLLKGYDIRLRPDFG-GPPVCVGMNIDIA 71
Query: 208 SMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSY 267
S+ +SE++MDY++ YF+QYWRD RL++ G NL+L ++ +++W PDTY LN K+S+
Sbjct: 72 SIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSF 131
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
VH +TV N+++R++ DG +LY +R+T A C M LR +P+D Q+C L + SY Y + +
Sbjct: 132 VHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIE 191
Query: 328 YHWTPG-KSISFVPGMAISQFDFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVI 384
++W G K+++ V + + QF + RN F G + L ++F LKR+ GYF++
Sbjct: 192 FYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFA--TGAYPRLSLSFRLKRNIGYFIL 249
Query: 385 QVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDW 444
Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITTVLT++TI+ R LPK+ Y A+D
Sbjct: 250 QTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDM 309
Query: 445 FLLMSFFYCIATILEFAAVHY 465
+L+ F + +LE+A V+Y
Sbjct: 310 YLMGCFVFVFLALLEYAFVNY 330
>gi|1710184|gb|AAB38273.1| glycine receptor alpha 2B subunit [Homo sapiens]
Length = 360
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|426256678|ref|XP_004021964.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Ovis aries]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|126336876|ref|XP_001364655.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Monodelphis
domestica]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 197/326 (60%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGK------NITLVLNNLL---KNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + + L+ L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKPPSQSMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ +SQF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLSQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|363728848|ref|XP_003640566.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gallus
gallus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K+HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTTFCKEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|169646728|ref|NP_001112358.1| glycine receptor subunit alpha-2 isoform B precursor [Homo sapiens]
gi|40557002|gb|AAR87843.1| glycine receptor alpha2 subunit B [Homo sapiens]
gi|47496633|emb|CAG29339.1| GLRA2 [Homo sapiens]
gi|119619265|gb|EAW98859.1| glycine receptor, alpha 2, isoform CRA_b [Homo sapiens]
gi|158260145|dbj|BAF82250.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|348554547|ref|XP_003463087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Cavia
porcellus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDTRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|224042764|ref|XP_002197622.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Taeniopygia
guttata]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K+HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTTFCKEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|301779952|ref|XP_002925393.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Ailuropoda melanoleuca]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTALCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|74006497|ref|XP_857203.1| PREDICTED: glycine receptor subunit alpha-2 isoform 9 [Canis lupus
familiaris]
gi|114687826|ref|XP_001137046.1| PREDICTED: glycine receptor subunit alpha-2 isoform 7 [Pan
troglodytes]
gi|332223909|ref|XP_003261111.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Nomascus
leucogenys]
gi|397468135|ref|XP_003805750.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Pan
paniscus]
gi|402909538|ref|XP_003917474.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Papio
anubis]
gi|410988112|ref|XP_004000332.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Felis catus]
gi|426395226|ref|XP_004063876.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|194227682|ref|XP_001489514.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Equus
caballus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|344288589|ref|XP_003416030.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Loxodonta
africana]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAVCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|195457046|ref|XP_002075402.1| GK17727 [Drosophila willistoni]
gi|194171487|gb|EDW86388.1| GK17727 [Drosophila willistoni]
Length = 497
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 192/318 (60%), Gaps = 17/318 (5%)
Query: 163 KKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
K+ +++ G+ N+T ++ +L+ Y PN G GEP + ++ I S ISE++MDY+
Sbjct: 28 KRKEMLAGRLENVTQTISKILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 221 MDCYFRQYWRDSRLSF--MGP----------INN-LSLSIKMLEKIWRPDTYILNGKQSY 267
+ Y QYWRD RL+F GP +N+ L+LS EKIW PDT+ N K S+
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDNDAADDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+H +T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 328 YHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
+W P + V + QF I + + G + L ++F L+R+ GYFV Q Y
Sbjct: 207 MYWKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 265
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+
Sbjct: 266 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 325
Query: 448 MSFFYCIATILEFAAVHY 465
M F + A +LE+AAV+Y
Sbjct: 326 MCFVFVFAALLEYAAVNY 343
>gi|443703781|gb|ELU01183.1| hypothetical protein CAPTEDRAFT_144043 [Capitella teleta]
Length = 495
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 186/298 (62%), Gaps = 4/298 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ + NLL+ Y P G GE II+ +L+ S ISE++MDY++ Y QYW+
Sbjct: 39 QNVSRTIANLLEKYDIRLRPQFG-GEALIIEMKLLLASFDSISEVNMDYTITIYLNQYWK 97
Query: 231 DSRLSFMGPINN-LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D RL+F + ++L+ EKIW PDT+ N K S++H +T NK++R++ DG ++Y
Sbjct: 98 DERLAFSDNYDETMTLTGDFAEKIWVPDTFFANDKHSFLHDVTEKNKMVRLHGDGSLVYG 157
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG--KSISFVPGMAISQF 347
MR T C M L +P+D Q+C + + SY YP++ +V W G ++ V + I QF
Sbjct: 158 MRFTTTLACMMDLHYYPLDVQNCTVEIESYGYPMQDVVMKWKGGGEDAVDGVAKVEIPQF 217
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ + K G + L ++F ++R+ GYF+ Q Y+P +LIV+LSWVSFWI+ EA
Sbjct: 218 TIVDYRCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILIVMLSWVSFWINHEA 277
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
TS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 278 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 335
>gi|440899770|gb|ELR51025.1| Glycine receptor subunit alpha-2 [Bos grunniens mutus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|296234940|ref|XP_002762678.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Callithrix
jacchus]
gi|296234944|ref|XP_002762680.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Callithrix
jacchus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 193/327 (59%), Gaps = 14/327 (4%)
Query: 155 VSNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTN 203
+NH + K HD GK + L+ Y + PN KG P + N
Sbjct: 18 ATNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCN 76
Query: 204 MLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILN 262
+ I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 77 IFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFAN 136
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y
Sbjct: 137 EKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYT 196
Query: 323 IEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGY 381
+ L++ W + G+ + QF + + K G+F+ ++V F+L+R GY
Sbjct: 197 MNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGY 256
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A
Sbjct: 257 YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKA 316
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTK 468
+D ++ + + A +LE+AAV++ ++
Sbjct: 317 IDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|291407100|ref|XP_002719959.1| PREDICTED: glycine receptor, alpha 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTGFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|296470483|tpg|DAA12598.1| TPA: glycine receptor, alpha 2-like isoform 2 [Bos taurus]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|426256680|ref|XP_004021965.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Ovis aries]
gi|426256682|ref|XP_004021966.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Ovis aries]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|403255308|ref|XP_003920383.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 193/327 (59%), Gaps = 14/327 (4%)
Query: 155 VSNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTN 203
+NH + K HD GK + L+ Y + PN KG P + N
Sbjct: 18 ATNHFRAAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCN 76
Query: 204 MLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILN 262
+ I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 77 IFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFAN 136
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y
Sbjct: 137 EKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYT 196
Query: 323 IEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGY 381
+ L++ W + G+ + QF + + K G+F+ ++V F+L+R GY
Sbjct: 197 MNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGY 256
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A
Sbjct: 257 YLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKA 316
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTK 468
+D ++ + + A +LE+AAV++ ++
Sbjct: 317 IDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|195479056|ref|XP_002100749.1| GE17238 [Drosophila yakuba]
gi|194188273|gb|EDX01857.1| GE17238 [Drosophila yakuba]
Length = 496
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 189/316 (59%), Gaps = 16/316 (5%)
Query: 164 KHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSM 221
+ D++ G+ N+T ++N+L+ Y PN G GEP + ++ I S ISE++MDY++
Sbjct: 29 RKDVLAGRLENVTQTISNILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 222 DCYFRQYWRDSRLSFM------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVH 269
Y QYWRD RL+F G + L+LS EKIW PDT+ N K S++H
Sbjct: 88 TMYLNQYWRDERLAFNIFGQYFEDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLH 147
Query: 270 TITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYH 329
+T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V +
Sbjct: 148 DVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMY 207
Query: 330 WTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVP 389
W P + V + QF I + + G + L ++F L+R+ GYFV Q Y+P
Sbjct: 208 WKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLP 266
Query: 390 CVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 449
+LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M
Sbjct: 267 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 326
Query: 450 FFYCIATILEFAAVHY 465
F + A +LE+AAV+Y
Sbjct: 327 FVFVFAALLEYAAVNY 342
>gi|1684900|gb|AAB38272.1| glycine receptor alpha 2 subunit [Homo sapiens]
Length = 360
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|345327023|ref|XP_003431119.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2
[Ornithorhynchus anatinus]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAALCKDHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G I+E MDY ++ + RQ W D+RL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSIAETTMDYRVNIFLRQQWNDTRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVADGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|296475589|tpg|DAA17704.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 392
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|338728947|ref|XP_003365793.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
gi|338728949|ref|XP_003365794.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|194894090|ref|XP_001978006.1| GG17931 [Drosophila erecta]
gi|195555119|ref|XP_002077031.1| GD24824 [Drosophila simulans]
gi|304726|gb|AAA28559.1| GABA receptor beta subunit [Drosophila melanogaster]
gi|386138|gb|AAB27090.1| putative gamma-aminobutyric acid receptor beta subunit [Drosophila
melanogaster]
gi|190649655|gb|EDV46933.1| GG17931 [Drosophila erecta]
gi|194203049|gb|EDX16625.1| GD24824 [Drosophila simulans]
Length = 496
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 189/316 (59%), Gaps = 16/316 (5%)
Query: 164 KHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSM 221
+ D++ G+ N+T ++N+L+ Y PN G GEP + ++ I S ISE++MDY++
Sbjct: 29 RKDVLAGRLENVTQTISNILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 222 DCYFRQYWRDSRLSFM------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVH 269
Y QYWRD RL+F G + L+LS EKIW PDT+ N K S++H
Sbjct: 88 TMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLH 147
Query: 270 TITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYH 329
+T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V +
Sbjct: 148 DVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMY 207
Query: 330 WTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVP 389
W P + V + QF I + + G + L ++F L+R+ GYFV Q Y+P
Sbjct: 208 WKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLP 266
Query: 390 CVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 449
+LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M
Sbjct: 267 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 326
Query: 450 FFYCIATILEFAAVHY 465
F + A +LE+AAV+Y
Sbjct: 327 FVFVFAALLEYAAVNY 342
>gi|426378386|ref|XP_004055908.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Gorilla gorilla gorilla]
Length = 440
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 8 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 66
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 67 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 186
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 187 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 244
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 245 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 296
>gi|195131083|ref|XP_002009980.1| GI15665 [Drosophila mojavensis]
gi|193908430|gb|EDW07297.1| GI15665 [Drosophila mojavensis]
Length = 498
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 192/318 (60%), Gaps = 17/318 (5%)
Query: 163 KKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
K+ +++ G+ N+T ++ +L+ Y PN G GEP + ++ I S ISE++MDY+
Sbjct: 29 KRKEMLAGRLENVTQTISKILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYT 87
Query: 221 MDCYFRQYWRDSRLSF--MGP----------INN-LSLSIKMLEKIWRPDTYILNGKQSY 267
+ Y QYWRD RL+F GP +N+ L+LS EKIW PDT+ N K S+
Sbjct: 88 ITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 147
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+H +T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V
Sbjct: 148 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 207
Query: 328 YHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
+W P + V + QF I + + G + L ++F L+R+ GYFV Q Y
Sbjct: 208 MYWKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 266
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+
Sbjct: 267 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 326
Query: 448 MSFFYCIATILEFAAVHY 465
M F + A +LE+AAV+Y
Sbjct: 327 MCFVFVFAALLEYAAVNY 344
>gi|301779950|ref|XP_002925392.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Ailuropoda melanoleuca]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTALCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|388490372|ref|NP_001253855.1| glycine receptor subunit alpha-2 [Macaca mulatta]
gi|74006483|ref|XP_548866.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Canis lupus
familiaris]
gi|114687824|ref|XP_001137132.1| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Pan
troglodytes]
gi|332223907|ref|XP_003261110.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Nomascus
leucogenys]
gi|345806787|ref|XP_003435502.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|397468133|ref|XP_003805749.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pan
paniscus]
gi|402909536|ref|XP_003917473.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Papio
anubis]
gi|410988110|ref|XP_004000331.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Felis catus]
gi|410988114|ref|XP_004000333.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Felis catus]
gi|426395224|ref|XP_004063875.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gorilla
gorilla gorilla]
gi|355757195|gb|EHH60720.1| Glycine receptor subunit alpha-2 [Macaca fascicularis]
gi|380785019|gb|AFE64385.1| glycine receptor subunit alpha-2 isoform A precursor [Macaca
mulatta]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|4504021|ref|NP_002054.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|169646723|ref|NP_001112357.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|121578|sp|P23416.1|GLRA2_HUMAN RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|31849|emb|CAA36257.1| inhibitory glycine receptor [Homo sapiens]
gi|3598701|gb|AAC35290.1| glycine receptor alpha 2 subunit [Homo sapiens]
gi|34783246|gb|AAH32864.1| Glycine receptor, alpha 2 [Homo sapiens]
gi|40557000|gb|AAR87842.1| glycine receptor alpha2 subunit A [Homo sapiens]
gi|119619266|gb|EAW98860.1| glycine receptor, alpha 2, isoform CRA_c [Homo sapiens]
gi|189069147|dbj|BAG35485.1| unnamed protein product [Homo sapiens]
gi|261861444|dbj|BAI47244.1| glycine receptor, alpha 2 [synthetic construct]
gi|312151948|gb|ADQ32486.1| glycine receptor, alpha 2 [synthetic construct]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|327268305|ref|XP_003218938.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Anolis
carolinensis]
Length = 455
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 190/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K+HD GK+ L+ Y + PN KG P + N+ I S G I+
Sbjct: 28 KEHDSRSGKSPAQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSIA 86
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 87 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 146
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 147 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMS 206
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 207 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 267 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 327 FVFAALLEYAAVNFVSR 343
>gi|297709452|ref|XP_002831442.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pongo
abelii]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|118084056|ref|XP_001234291.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gallus
gallus]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K+HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTTFCKEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|45555535|ref|NP_996469.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|14286135|sp|Q08832.2|GBRB3_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta-like;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|16767980|gb|AAL28208.1| GH08705p [Drosophila melanogaster]
gi|45446997|gb|AAS65370.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|220956304|gb|ACL90695.1| Lcch3-PA [synthetic construct]
Length = 496
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 189/316 (59%), Gaps = 16/316 (5%)
Query: 164 KHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSM 221
+ D++ G+ N+T ++N+L+ Y PN G GEP + ++ I S ISE++MDY++
Sbjct: 29 RKDVLAGRLENVTQTISNILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 222 DCYFRQYWRDSRLSFM------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVH 269
Y QYWRD RL+F G + L+LS EKIW PDT+ N K S++H
Sbjct: 88 TMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLH 147
Query: 270 TITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYH 329
+T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V +
Sbjct: 148 DVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMY 207
Query: 330 WTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVP 389
W P + V + QF I + + G + L ++F L+R+ GYFV Q Y+P
Sbjct: 208 WKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLP 266
Query: 390 CVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 449
+LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M
Sbjct: 267 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 326
Query: 450 FFYCIATILEFAAVHY 465
F + A +LE+AAV+Y
Sbjct: 327 FVFVFAALLEYAAVNY 342
>gi|195392956|ref|XP_002055120.1| GJ19199 [Drosophila virilis]
gi|194149630|gb|EDW65321.1| GJ19199 [Drosophila virilis]
Length = 497
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 192/318 (60%), Gaps = 17/318 (5%)
Query: 163 KKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
K+ +++ G+ N+T ++ +L+ Y PN G GEP + ++ I S ISE++MDY+
Sbjct: 28 KRKEMLAGRLENVTQTISKILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 221 MDCYFRQYWRDSRLSF--MGP----------INN-LSLSIKMLEKIWRPDTYILNGKQSY 267
+ Y QYWRD RL+F GP +N+ L+LS EKIW PDT+ N K S+
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+H +T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 328 YHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
+W P + V + QF I + + G + L ++F L+R+ GYFV Q Y
Sbjct: 207 MYWKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 265
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+
Sbjct: 266 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 325
Query: 448 MSFFYCIATILEFAAVHY 465
M F + A +LE+AAV+Y
Sbjct: 326 MCFVFVFAALLEYAAVNY 343
>gi|301621138|ref|XP_002939917.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 191/315 (60%), Gaps = 10/315 (3%)
Query: 163 KKHDLMIGKNITLVLNNLL-------KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEI 215
K+HD GK+ + ++ L Y + PN KG P + N+ I S G I+E
Sbjct: 28 KEHDTRSGKSPPMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAET 86
Query: 216 DMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
MDY ++ + RQ W D RLS+ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 87 TMDYRVNIFLRQTWNDPRLSYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 146
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKLLRI ++G++LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 147 NKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLSTS 206
Query: 335 SISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +LI
Sbjct: 207 PVQVADGLTLPQFILKEENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLI 266
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ + +
Sbjct: 267 VILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFV 326
Query: 454 IATILEFAAVHYFTK 468
A +LE+AAV++ ++
Sbjct: 327 FAALLEYAAVNFVSR 341
>gi|224042766|ref|XP_002197634.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Taeniopygia
guttata]
Length = 452
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K+HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTTFCKEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|291407098|ref|XP_002719958.1| PREDICTED: glycine receptor, alpha 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 452
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRTGFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|53765741|gb|AAU93411.1| testis gamma-aminobutyric acid receptor subunit beta 3 [Rattus
norvegicus]
Length = 471
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 39 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 97
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 98 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 158 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 217
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P ++I +LSWVSFWI+ +A++ R+
Sbjct: 218 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARVA 275
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 327
>gi|195044266|ref|XP_001991787.1| GH11877 [Drosophila grimshawi]
gi|193901545|gb|EDW00412.1| GH11877 [Drosophila grimshawi]
Length = 497
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 192/318 (60%), Gaps = 17/318 (5%)
Query: 163 KKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
K+ +++ G+ N+T ++ +L+ Y PN G GEP + ++ I S ISE++MDY+
Sbjct: 28 KRKEMLAGRLENVTQTISKILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 221 MDCYFRQYWRDSRLSF--MGP----------INN-LSLSIKMLEKIWRPDTYILNGKQSY 267
+ Y QYWRD RL+F GP +N+ L+LS EKIW PDT+ N K S+
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDTDAEDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 268 VHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLV 327
+H +T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 328 YHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
+W P + V + QF I + + G + L ++F L+R+ GYFV Q Y
Sbjct: 207 MYWKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTY 265
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+
Sbjct: 266 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 325
Query: 448 MSFFYCIATILEFAAVHY 465
M F + A +LE+AAV+Y
Sbjct: 326 MCFVFVFAALLEYAAVNY 343
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|149638346|ref|XP_001516922.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1
[Ornithorhynchus anatinus]
Length = 452
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 194/326 (59%), Gaps = 14/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH + K HD GK+ + L+ Y + PN KG P + N+
Sbjct: 19 TNHFRAALCKDHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNI 77
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W D+RL++ P ++L L ML+ IW+PD + N
Sbjct: 78 FINSFGSVTETTMDYRVNIFLRQQWNDTRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 137
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 138 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 197
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L+R GY+
Sbjct: 198 NDLIFEWLSDGPVQVADGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYY 257
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 258 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 317
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 318 DIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|449270932|gb|EMC81575.1| Glycine receptor subunit alpha-2 [Columba livia]
Length = 452
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 190/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K+HD GK+ + L+ Y + PN KG P + N+ I S G I+
Sbjct: 28 KEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSIA 86
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 87 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 146
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 147 TDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 206
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 207 DGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 267 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 327 FVFAALLEYAAVNFVSR 343
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 40 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 98
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 99 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 159 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 218
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 219 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 276
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 277 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 328
>gi|327268303|ref|XP_003218937.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Anolis
carolinensis]
Length = 455
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 190/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K+HD GK+ L+ Y + PN KG P + N+ I S G ++
Sbjct: 28 KEHDSRSGKSPAQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 86
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 87 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 146
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 147 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMS 206
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 207 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 267 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 327 FVFAALLEYAAVNFVSR 343
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|426378384|ref|XP_004055907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Gorilla gorilla gorilla]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|332843339|ref|XP_003314619.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan troglodytes]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|301621136|ref|XP_002939916.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 191/315 (60%), Gaps = 10/315 (3%)
Query: 163 KKHDLMIGKNITLVLNNLL-------KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEI 215
K+HD GK+ + ++ L Y + PN KG P + N+ I S G ++E
Sbjct: 28 KEHDTRSGKSPPMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVTET 86
Query: 216 DMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
MDY ++ + RQ W D RLS+ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 87 TMDYRVNIFLRQTWNDPRLSYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 146
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKLLRI ++G++LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 147 NKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLSTS 206
Query: 335 SISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +LI
Sbjct: 207 PVQVADGLTLPQFILKEENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLI 266
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ + +
Sbjct: 267 VILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFV 326
Query: 454 IATILEFAAVHYFTK 468
A +LE+AAV++ ++
Sbjct: 327 FAALLEYAAVNFVSR 341
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|281353495|gb|EFB29079.1| hypothetical protein PANDA_014885 [Ailuropoda melanoleuca]
Length = 431
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G I+
Sbjct: 7 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSIA 65
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 66 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 125
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 126 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 185
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 186 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 245
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 246 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 305
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 306 FVFAALLEYAAVNFVSR 322
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 97 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 155
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 156 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 215
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 216 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 275
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 276 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 333
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 334 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 385
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|1363141|pir||B49970 glycine receptor alpha-2 chain - mouse
Length = 451
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 193/326 (59%), Gaps = 15/326 (4%)
Query: 156 SNHLKEK--KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNM 204
+NH +E K HD GK+ + L+ Y P + KG P + N+
Sbjct: 19 TNHFREAFCKDHDSRSGKHPSQTLSPSDFLDKLMGRTSGYARIRP--NFKGPPVNVTCNI 76
Query: 205 LIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNG 263
I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N
Sbjct: 77 FINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANE 136
Query: 264 KQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPI 323
K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y +
Sbjct: 137 KGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTM 196
Query: 324 EKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYF 382
L++ W + G+ + QF + + K G+F+ ++V F+L R GY+
Sbjct: 197 NDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLDRQMGYY 256
Query: 383 VIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
+IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 443 DWFLLMSFFYCIATILEFAAVHYFTK 468
D ++ + + A +LE+AAV++ ++
Sbjct: 317 DIWMAVCLLFVFAALLEYAAVNFVSR 342
>gi|301772918|ref|XP_002921880.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Ailuropoda melanoleuca]
Length = 473
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|426256684|ref|XP_004021967.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Ovis aries]
Length = 436
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 97 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 155
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 156 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 215
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 216 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 275
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 276 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 333
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 334 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 385
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P ++I +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|345806789|ref|XP_857159.2| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Canis lupus
familiaris]
gi|410988116|ref|XP_004000334.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Felis catus]
Length = 436
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|114687834|ref|XP_001136822.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Pan
troglodytes]
gi|332223911|ref|XP_003261112.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Nomascus
leucogenys]
gi|426395228|ref|XP_004063877.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|395837968|ref|XP_003791900.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Otolemur
garnettii]
Length = 437
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|395527076|ref|XP_003765677.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Sarcophilus harrisii]
Length = 472
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|221041716|dbj|BAH12535.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDAQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|391339617|ref|XP_003744144.1| PREDICTED: uncharacterized protein LOC100906164 [Metaseiulus
occidentalis]
Length = 1203
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 179/303 (59%), Gaps = 5/303 (1%)
Query: 170 GKNITLVLNNLL-KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
G+NIT +LN+ K Y PN+G G P + +M I S+ +SE+ MD++ D YFRQ
Sbjct: 45 GQNITHILNSFFTKGYDKRVRPNYG-GPPVKVGVSMQIVSISAVSEVQMDFTSDFYFRQS 103
Query: 229 WRDSRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
WRD RLSF ++ +++ ++ KIW PDT+ N K +Y H T PN LRI DGD+
Sbjct: 104 WRDERLSFPRTNELSQMTVGAEVAGKIWVPDTFFANEKTAYFHIATTPNTFLRIGSDGDV 163
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAIS 345
S+RLT+ A+CPM LR FPMD QSC + + S+ Y + + Y W G KS+ + +
Sbjct: 164 YRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMSDIRYSWRDGAKSVGISEEVQLP 223
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QF ++ G +S L R GY++IQ+YVP LIVV+SWVSFW+HR
Sbjct: 224 QFKIQGHVQKASEISLSTGNYSRLICEIRFVRSMGYYLIQIYVPAGLIVVISWVSFWLHR 283
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
AT R+ LG+ TVLT++T+ + + LPK+ Y ++D +L F A++LE+AAV Y
Sbjct: 284 NATPARVALGVMTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLLEYAAVGY 343
Query: 466 FTK 468
K
Sbjct: 344 LGK 346
>gi|296234946|ref|XP_002762681.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Callithrix
jacchus]
gi|403255312|ref|XP_003920385.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 436
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|338728951|ref|XP_003365795.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 436
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|402909540|ref|XP_003917475.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Papio
anubis]
Length = 436
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 12/317 (3%)
Query: 163 KKHDLMIGKNITLVLN---------NLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
K HD GK + L+ Y + PN KG P + N+ I S G ++
Sbjct: 12 KDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVTCNIFINSFGSVT 70
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+PD + N K + H +T
Sbjct: 71 ETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVT 130
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 131 TDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS 190
Query: 333 GKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ G+ + QF + + K G+F+ ++V F+L+R GY++IQ+Y+P +
Sbjct: 191 DGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 250
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 251 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 310
Query: 452 YCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 311 FVFAALLEYAAVNFVSR 327
>gi|47214122|emb|CAG01380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 450
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 191/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 16 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 74
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 75 VGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 134
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 135 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGEIAVTGVTRIELPQFSIVDYKLV 194
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 195 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 252
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 253 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 304
>gi|410920808|ref|XP_003973875.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 474
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 40 VDKLLKGYDIRLRPDFG-GRPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 98
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 99 VGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 159 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSIVDYKLV 218
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 219 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 276
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 277 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 328
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|118150482|ref|NP_001071280.1| ligand-gated chloride channel homolog 3 precursor [Apis mellifera]
gi|110555512|gb|ABG75736.1| GABA-gated ion channel [Apis mellifera]
Length = 489
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G GEP ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 35 ENVTQTISRILDGYDIRLRPNFG-GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 93
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG + Y M
Sbjct: 94 DERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGM 153
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 154 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRG---VEEAELPQFT 210
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 211 IIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 270
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 271 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 327
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|156717244|ref|NP_001096164.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 precursor
[Xenopus (Silurana) tropicalis]
gi|134025815|gb|AAI36050.1| gabrb3 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GSPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 TGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDNAVTGVERIELPQFSIMDHKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFA--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|20750089|gb|AAM23270.1| glycine-gated ion channel alpha3 subunit [Morone americana]
Length = 440
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 28 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYAEYPDD 86
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 87 SLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 146
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 147 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILKDESDLRYCTKH 206
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 207 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 266
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SRT LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 267 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 314
>gi|410906073|ref|XP_003966516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 482
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 LGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+S ++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGVTRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNY 329
>gi|281348283|gb|EFB23867.1| hypothetical protein PANDA_017042 [Ailuropoda melanoleuca]
Length = 381
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 172/257 (66%), Gaps = 3/257 (1%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D +FRQ W D RL F GP+ L L+ + KIW PDT+ NGK+S H +T PNKL
Sbjct: 1 EYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKL 60
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSIS 337
LR+ +G +LY+MRLTI A CPM L +FPMD +CPL GSYAY ++VY WT GK+ S
Sbjct: 61 LRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKS 120
Query: 338 F---VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
G ++Q+D + + GE+ ++ +F+LKR GYFVIQ Y+PC++ V
Sbjct: 121 VEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTV 180
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 181 ILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVF 240
Query: 455 ATILEFAAVHYFTKLCY 471
+ ++EFA V+YFTK +
Sbjct: 241 SALIEFATVNYFTKRSW 257
>gi|47217916|emb|CAG06522.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 15 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 73
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 74 LGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+S ++ V + + QF +
Sbjct: 134 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGVTRIELPQFSIVDYKLV 193
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 194 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 251
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F +LE+A V+Y
Sbjct: 252 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNY 303
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 188/320 (58%), Gaps = 4/320 (1%)
Query: 151 RLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMG 210
RL +K + +L + ++ Y + PN KG P + N+ I S G
Sbjct: 23 RLSSCKEEIKHPSRQELSPSDFLDKLMGKT-SGYDARIRPNF-KGPPVNVTCNIFINSFG 80
Query: 211 PISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVH 269
I+E MDY ++ + RQ W D RL++ P ++L L ML+ IW+PD + N K + H
Sbjct: 81 SITETTMDYRLNVFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFH 140
Query: 270 TITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYH 329
+T NKLLRI QDG +LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++
Sbjct: 141 EVTTDNKLLRIFQDGSVLYSIRLTLTLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFE 200
Query: 330 WTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYV 388
W + + + QF + K G+F+ ++V F+L+R GY++IQ+Y+
Sbjct: 201 WLSENPVQVADDLTLPQFVLKEEKDLGYCTKHYNTGQFTCIEVKFHLERQMGYYLIQMYI 260
Query: 389 PCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLM 448
P +LIV+LSWVSFWI+ +A R+GLGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 261 PSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 320
Query: 449 SFFYCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 321 CLLFVFAALLEYAAVNFVSR 340
>gi|449483363|ref|XP_002194694.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Taeniopygia guttata]
Length = 443
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 8 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 66
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 67 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEYRLV 186
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 187 SKNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 244
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 245 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 296
>gi|71996759|ref|NP_499661.2| Protein GAB-1 [Caenorhabditis elegans]
gi|74958176|sp|O18276.3|GBRB_CAEEL RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; Flags:
Precursor
gi|29603354|emb|CAB07719.3| Protein GAB-1 [Caenorhabditis elegans]
Length = 550
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSI 247
P G G+ ++ +++I S ISE+DMDY++ Y QYW D RL + PI+ ++LS
Sbjct: 71 PGFG-GDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSG 129
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
+ + IW PDT++ N K SY+H +T NK+LRIN DG + Y MRLT +C M+LRNFP+
Sbjct: 130 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPL 189
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFS 367
D+Q+C + + SY Y +++ W ++ V + QF + G +
Sbjct: 190 DSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQ 249
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
L + F L+R GYF+ Q Y+PCVLIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS
Sbjct: 250 RLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 309
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 310 GVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 347
>gi|383863330|ref|XP_003707134.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Megachile rotundata]
Length = 508
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G GEP ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 35 ENVTQTISRILDGYDIRLRPNFG-GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 93
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG + Y M
Sbjct: 94 DERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGM 153
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 154 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRG---VEEAELPQFT 210
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + + G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 211 IIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 270
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 271 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 327
>gi|341899108|gb|EGT55043.1| hypothetical protein CAEBREN_09119 [Caenorhabditis brenneri]
Length = 510
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSI 247
P G G+ ++ +++I S ISE+DMDY++ Y QYW D RL + PI+ ++LS
Sbjct: 22 PGFG-GDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWNNEIPIDEMTLSG 80
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
+ + IW PDT++ N K SY+H +T NK+LRIN DG + Y MRLT +C M+LRNFP+
Sbjct: 81 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPL 140
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFS 367
D+Q+C + + SY Y +++ W ++ V + QF + G +
Sbjct: 141 DSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQ 200
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
L + F L+R GYF+ Q Y+PCVLIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS
Sbjct: 201 RLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 260
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 261 GVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 298
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVKRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|46048684|ref|NP_990677.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Gallus
gallus]
gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|62893|emb|CAA38147.1| precursor peptide [Gallus gallus]
Length = 476
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEYRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|189067536|dbj|BAG37715.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCLVFVFLALLEYAFVNY 329
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 180/286 (62%), Gaps = 4/286 (1%)
Query: 186 SSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLS 244
S H KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L
Sbjct: 54 SKNEATHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLD 113
Query: 245 LSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRN 304
L ML+ IW+PD + N K + H +T NKLLRI+++G++LYS+R+T+ CPM L+N
Sbjct: 114 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLILACPMDLKN 173
Query: 305 FPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPK--RNFTFKRR 362
FPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K R+ T
Sbjct: 174 FPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQF-LLKEEKDLRHCTKHYN 232
Query: 363 EGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTL 422
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVLT+
Sbjct: 233 TGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTM 292
Query: 423 STISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
+T S SR LPKV Y A+D ++ + + + +LE+AAV++ +
Sbjct: 293 TTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR 338
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 187/309 (60%), Gaps = 3/309 (0%)
Query: 162 KKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSM 221
+ +H M + L Y + PN KG P + N+ I S G I+E MDY +
Sbjct: 196 RARHAPMSPSDFLDKLMGRTSGYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRV 254
Query: 222 DCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
+ + RQ W D RL++ P ++L L ML+ IW+PD + N K ++ H +T NKLLRI
Sbjct: 255 NIFLRQQWNDPRLAYAEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRI 314
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVP 340
++G++LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W +
Sbjct: 315 FKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQENGPVQVAE 374
Query: 341 GMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWV 399
G+ + QF + K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWV
Sbjct: 375 GLTLPQFILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWV 434
Query: 400 SFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILE 459
SFWI+ +A R+ LGITTVLT++T S SRT LPKV Y A+D ++ + + + +LE
Sbjct: 435 SFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLE 494
Query: 460 FAAVHYFTK 468
+AAV++ ++
Sbjct: 495 YAAVNFVSR 503
>gi|432877241|ref|XP_004073116.1| PREDICTED: glycine receptor subunit alpha-4-like [Oryzias latipes]
Length = 486
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P N
Sbjct: 47 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQNWNDPRLAYSEYPDN 105
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI QDG +LYS+RLT+ +CPM
Sbjct: 106 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMD 165
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + + + QF + K
Sbjct: 166 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCTKH 225
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 226 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 285
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 286 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 333
>gi|382928891|gb|AFG29911.1| GABA-gated chloride channel 1 [Tetranychus urticae]
Length = 812
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 186/304 (61%), Gaps = 6/304 (1%)
Query: 169 IGKNITLVLNNLLKN-YQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
IG NI+ +LN+ + Y PN+G G P + M I ++ +SE+ MD++ D YFRQ
Sbjct: 45 IGSNISQILNSFFSSGYDKRVRPNYG-GPPVKVGVTMHILTISSVSEVQMDFTADFYFRQ 103
Query: 228 YWRDSRLSFMG--PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGD 285
WRDSRLSF I+ + + ++ +KIW PDT+ N KQ+Y H T N LRI+ DG
Sbjct: 104 LWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDGQ 163
Query: 286 ILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAIS 345
+L S+RLT+ A+CPM+L+ FPMD Q C + + SY Y + ++Y+W ++ + +
Sbjct: 164 VLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLP 223
Query: 346 QFDFISSPKRNFTF-KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
QF I+S ++++ + G +S L L R GY++IQ+YVP LIV++SWVSFW+H
Sbjct: 224 QFS-IASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLH 282
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
R AT R+ LG+ TVLT++T+ + + LPK+ Y ++D FL F A +LE+AAV
Sbjct: 283 RNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALLEYAAVG 342
Query: 465 YFTK 468
Y K
Sbjct: 343 YIGK 346
>gi|148708799|gb|EDL40746.1| glycine receptor, alpha 2 subunit, isoform CRA_b [Mus musculus]
Length = 407
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 176/276 (63%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ I
Sbjct: 6 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSI 65
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C
Sbjct: 66 WKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCT 125
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + G+ + QF + + K G+F+ ++V
Sbjct: 126 MQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVK 185
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR
Sbjct: 186 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 245
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 246 LPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 281
>gi|350423047|ref|XP_003493368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 489
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G GEP ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 35 ENVTQTISRILDGYDIRLRPNFG-GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 93
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG + Y M
Sbjct: 94 DERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGM 153
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 154 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTPVRG---VEEAELPQFT 210
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + + G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 211 IIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 270
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 271 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 327
>gi|340727433|ref|XP_003402048.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus terrestris]
Length = 489
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G GEP ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 35 ENVTQTISRILDGYDIRLRPNFG-GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 93
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG + Y M
Sbjct: 94 DERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGM 153
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 154 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTPVRG---VEEAELPQFT 210
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + + G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 211 IIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 270
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 271 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 327
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D +C L + SY Y + + ++W G K+++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDELNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|307200307|gb|EFN80572.1| Gamma-aminobutyric acid receptor subunit beta-like [Harpegnathos
saltator]
Length = 460
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 183/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G G+P ++ ++ I S ISE++MDY++ Y QYW+
Sbjct: 6 ENVTQTISRILDGYDIRLRPNFG-GDPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWK 64
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG I Y M
Sbjct: 65 DERLAFSHEGEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSITYGM 124
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 125 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRG---VKDAELPQFT 181
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 182 IIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 241
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 242 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 298
>gi|126337134|ref|XP_001362985.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Monodelphis domestica]
Length = 473
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEHRLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 329
>gi|313849050|dbj|BAJ41377.1| GABA receptor [Tetranychus urticae]
Length = 827
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 186/304 (61%), Gaps = 6/304 (1%)
Query: 169 IGKNITLVLNNLLKN-YQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
IG NI+ +LN+ + Y PN+G G P + M I ++ +SE+ MD++ D YFRQ
Sbjct: 59 IGSNISQILNSFFSSGYDKRVRPNYG-GPPVKVGVTMHILTISSVSEVQMDFTADFYFRQ 117
Query: 228 YWRDSRLSFMG--PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGD 285
WRDSRLSF I+ + + ++ +KIW PDT+ N KQ+Y H T N LRI+ DG
Sbjct: 118 LWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDGQ 177
Query: 286 ILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAIS 345
+L S+RLT+ A+CPM+L+ FPMD Q C + + SY Y + ++Y+W ++ + +
Sbjct: 178 VLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLP 237
Query: 346 QFDFISSPKRNFTF-KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
QF I+S ++++ + G +S L L R GY++IQ+YVP LIV++SWVSFW+H
Sbjct: 238 QFS-IASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLH 296
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
R AT R+ LG+ TVLT++T+ + + LPK+ Y ++D FL F A +LE+AAV
Sbjct: 297 RNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALLEYAAVG 356
Query: 465 YFTK 468
Y K
Sbjct: 357 YIGK 360
>gi|308498974|ref|XP_003111673.1| CRE-GAB-1 protein [Caenorhabditis remanei]
gi|308239582|gb|EFO83534.1| CRE-GAB-1 protein [Caenorhabditis remanei]
Length = 566
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSI 247
P G G+ ++ +++I S ISE+DMDY++ Y QYW D RL + PI+ ++LS
Sbjct: 71 PGFG-GDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSG 129
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
+ + IW PDT++ N K SY+H +T NK+LRIN DG + Y MRLT +C M+LRNFP+
Sbjct: 130 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPL 189
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFS 367
D+Q+C + + SY Y +++ W ++ V + QF + G +
Sbjct: 190 DSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQ 249
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
L + F L+R GYF+ Q Y+PCVLIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS
Sbjct: 250 RLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 309
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 310 GVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 347
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 69 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 127
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 128 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 187
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 188 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 247
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 248 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 307
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 308 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 355
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 188/286 (65%), Gaps = 8/286 (2%)
Query: 185 QSSEP--PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINN 242
+ SEP P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++ G N
Sbjct: 21 RGSEPRRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 79
Query: 243 LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSL 302
L+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M L
Sbjct: 80 LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDL 139
Query: 303 RNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP--KRNFTF 359
R +P+D Q+C L + SY Y + + ++W G K+++ V + + QF + RN F
Sbjct: 140 RRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVF 199
Query: 360 KRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITTV
Sbjct: 200 A--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTV 257
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 258 LTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 303
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 150 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLAYHEFPDD 208
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 209 ALDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISKNGNVLYSIRITLTLACPMD 268
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPK-RNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF R+ T +
Sbjct: 269 LKNFPMDVQTCIMQLESFGYTMNDLIFKWQKANAVQIAEGLTLPQFILKEEKDLRDCTKE 328
Query: 361 RREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 329 YNTGMFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 388
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 389 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 436
>gi|268570843|ref|XP_002640852.1| C. briggsae CBR-GAB-1 protein [Caenorhabditis briggsae]
Length = 501
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSI 247
P G G+ ++ +++I S ISE+DMDY++ Y QYW D RL + PI+ ++LS
Sbjct: 33 PGFG-GDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSG 91
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
+ + IW PDT++ N K SY+H +T NK+LR+N DG + Y MRLT +C M+LRNFP+
Sbjct: 92 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRVNVDGKVAYGMRLTSTLSCSMNLRNFPL 151
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFS 367
D+Q+C + + SY Y +++ W ++ V + QF + G +
Sbjct: 152 DSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQ 211
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
L + F L+R GYF+ Q Y+PCVLIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS
Sbjct: 212 RLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 271
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 272 GVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 309
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 44 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 102
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 103 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 162
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 163 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 222
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 223 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 282
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 283 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 330
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 45 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 103
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 104 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 163
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 164 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 223
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 224 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 283
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 284 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 331
>gi|432856050|ref|XP_004068345.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 496
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 62 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 120
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 121 LGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 180
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 181 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSIVDYKLV 240
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F L+R+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 241 SRNVVFS--TGAYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 298
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 299 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 350
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|348506723|ref|XP_003440907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 482
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 VGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+S ++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNY 329
>gi|301623311|ref|XP_002940962.1| PREDICTED: glycine receptor subunit alpha-1-like, partial [Xenopus
(Silurana) tropicalis]
Length = 354
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 180/290 (62%), Gaps = 3/290 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-P 239
+ Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 50 ISGYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYSEYP 108
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
++L L ML+ IW+PD + N K + H IT NKLLRI ++G++LYS+RLT+ CP
Sbjct: 109 DDSLDLDPSMLDSIWKPDLFFANEKGANFHEITTDNKLLRIFKNGNVLYSIRLTLTLACP 168
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF +
Sbjct: 169 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWEEVGAVQVAEGLTLPQFILKEEKDLRYCT 228
Query: 360 KR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
K G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITT
Sbjct: 229 KHYSTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITT 288
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
VLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 289 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 338
>gi|444524995|gb|ELV13930.1| Glycine receptor subunit alpha-2 [Tupaia chinensis]
Length = 451
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 176/276 (63%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S G I+E MDY ++ + RQ W DSRL++ P ++L L ML+ I
Sbjct: 44 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSI 103
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C
Sbjct: 104 WKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCT 163
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + G+ + QF + + K G+F+ ++V
Sbjct: 164 MQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVK 223
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR
Sbjct: 224 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 283
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 284 LPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 319
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RLS+ P N
Sbjct: 52 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYQEYPDN 110
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 111 SLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLVLSCPMD 170
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 171 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 230
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 231 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 290
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 291 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 339
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 83 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 141
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 142 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 201
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 202 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFXLKEEKDLRYCXKH 261
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 262 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 321
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 322 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 369
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 37 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 95
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 96 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 155
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 156 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 215
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 216 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 275
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 276 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 323
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 32 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 90
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 91 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 150
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 151 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 210
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 211 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 270
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 271 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 318
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 37 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 95
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 96 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 155
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 156 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 215
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 216 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 275
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 276 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 323
>gi|432849823|ref|XP_004066630.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 484
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + ++ + S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
+G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 LGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+S ++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTRIELPQFSIVDYKLV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F +LE+A V+Y
Sbjct: 278 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNY 329
>gi|189099244|gb|ACD76859.1| gamma-aminobutyric acid A receptor beta 3 [Felis catus]
Length = 408
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 186/287 (64%), Gaps = 6/287 (2%)
Query: 182 KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN 241
K Y P+ G G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++ G
Sbjct: 1 KGYDIRLRPDFG-GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPL 59
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M
Sbjct: 60 NLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMD 119
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP--KRNFT 358
LR +P+D Q+C L + SY Y + + ++W G K+++ V + + QF + RN
Sbjct: 120 LRRYPLDEQNCTLEIESYGYTTDDIEFYWHGGDKAVTGVERIELPQFSIVEHRLVSRNVV 179
Query: 359 FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITT
Sbjct: 180 FA--TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITT 237
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
VLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 238 VLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 284
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 29 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 87
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 88 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 147
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 148 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 207
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 208 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 267
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 268 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 315
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 71 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 129
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 130 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 189
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 190 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 249
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 250 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 309
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 310 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 357
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 177/285 (62%), Gaps = 2/285 (0%)
Query: 186 SSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLS 244
S H KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L
Sbjct: 110 SKNEATHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLD 169
Query: 245 LSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRN 304
L ML+ IW+PD + N K + H +T NKLLRI+++G++LYS+R+T+ CPM L+N
Sbjct: 170 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKN 229
Query: 305 FPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-RE 363
FPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 230 FPMDVQTCIMQLESFGYTMNDLIFEWDKKGAVQVADGLTLPQFILKEEKDLRYCTKHYNT 289
Query: 364 GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLS 423
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVLT++
Sbjct: 290 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 349
Query: 424 TISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T S SR LPKV Y A+D ++ + + + +LE+AAV++ +
Sbjct: 350 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR 394
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|355704623|gb|EHH30548.1| Glycine receptor subunit alpha-2, partial [Macaca mulatta]
Length = 385
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 176/276 (63%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ I
Sbjct: 1 GPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSI 60
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI+++G +LYS+RLT+ +CPM L+NFPMD Q+C
Sbjct: 61 WKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCT 120
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + G+ + QF + + K G+F+ ++V
Sbjct: 121 MQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVK 180
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR
Sbjct: 181 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 240
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 241 LPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 276
>gi|391325188|ref|XP_003737121.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 563
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 180/303 (59%), Gaps = 5/303 (1%)
Query: 170 GKNITLVLNNLL-KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
G+NIT +LN K Y PN+G G P + +M I S+ +SE+ MD++ D YFRQ
Sbjct: 54 GQNITHILNAFFTKGYDKRVRPNYG-GNPVEVGVSMQIVSISTVSEVQMDFTSDFYFRQA 112
Query: 229 WRDSRLSFMGP--INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
WRD RLSF+ ++ +++ ++ KIW PDT+ N K +Y H T PN LRI+ +G++
Sbjct: 113 WRDERLSFVKSNDLDQMTVGAEVANKIWVPDTFFANEKTAYFHVATTPNTFLRISSEGEV 172
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
S+RLT+ A+CPM LR FPMD QSC + + S+ Y + + Y W G SI + +
Sbjct: 173 YRSIRLTVTASCPMDLRFFPMDRQSCTIEVESFGYTMSDIRYKWKDGPISIGISKEVELP 232
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QF + ++ G +S L R GY++IQ+Y+P LIVV+SWVSFW+HR
Sbjct: 233 QFKVLGHVQKISEVSLSTGNYSRLICEVRFVRSMGYYLIQIYIPASLIVVISWVSFWLHR 292
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
AT R+ LG+ TVLT++T+ + + LPK+ Y ++D FL F A++LE+AAV Y
Sbjct: 293 NATPARVSLGVMTVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFASLLEYAAVGY 352
Query: 466 FTK 468
K
Sbjct: 353 LGK 355
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 76 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 134
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 135 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 194
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 195 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILKEEKDLRYCTKH 254
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 255 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 314
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 315 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 362
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 29 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 87
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 88 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 147
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 148 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 207
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 208 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 267
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 268 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 315
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|292620123|ref|XP_002664179.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Danio rerio]
Length = 483
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 187/293 (63%), Gaps = 1/293 (0%)
Query: 173 ITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDS 232
+ + ++ LLK Y P+ G G P + ++ I S+ +SE++MDY++ YF+Q WRD
Sbjct: 44 VKVTVDKLLKGYDIRLRPDFG-GPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDK 102
Query: 233 RLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
RLS+ G NL+L ++ +++W PDTY +N K+S+VH +TV N+++R++ DG +LY +R+
Sbjct: 103 RLSYTGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRI 162
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISS 352
T A C M LR +P+D Q+C L + SY Y + + ++W G S++ V + + QF I
Sbjct: 163 TTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSIIDY 222
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
+ G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+
Sbjct: 223 KTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARV 282
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 283 ALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 335
>gi|156717762|ref|NP_001096421.1| gamma-aminobutyric acid (GABA) A receptor, beta 2 precursor
[Xenopus (Silurana) tropicalis]
gi|301624061|ref|XP_002941329.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Xenopus (Silurana) tropicalis]
gi|134026224|gb|AAI36090.1| LOC100125027 protein [Xenopus (Silurana) tropicalis]
Length = 474
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 193/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N+TLV ++ LLK Y P+ G G+P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMTLVKETVDRLLKGYDIRLRPDFG-GDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYSVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
I RN F G + L ++F L+R+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIIDYNLLSRNVVFS--TGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|348536058|ref|XP_003455514.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 53 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDS 111
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI +DG +LYS+RLT+ +CPM
Sbjct: 112 SLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMD 171
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + + K
Sbjct: 172 LKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMRDEKELGYCTKH 231
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 232 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 291
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+A V++ ++
Sbjct: 292 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSR 339
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 75 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 194
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 195 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 254
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 255 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 302
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|432933168|ref|XP_004081837.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 453
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 58 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDS 116
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI +DG +LYS+RLT+ +CPM
Sbjct: 117 SLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMD 176
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + + K
Sbjct: 177 LKNFPMDVQTCTMQLESFGYTMNDLVFEWLEYGAVQVSEGLTLPQFIMKEEKELGYCTKH 236
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 237 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 296
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+A V++ ++
Sbjct: 297 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSR 344
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 176/279 (63%), Gaps = 2/279 (0%)
Query: 192 HGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKML 250
H KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L L ML
Sbjct: 70 HKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSML 129
Query: 251 EKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQ 310
+ IW+PD + N K + H +T NKLLRI+++G++LYS+R+T+ CPM L+NFPMD Q
Sbjct: 130 DSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQ 189
Query: 311 SCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLL 369
+C + L S+ Y + L++ W ++ G+ + QF + K G+F+ +
Sbjct: 190 TCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCI 249
Query: 370 QVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDS 429
+ F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVLT++T S S
Sbjct: 250 EARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGS 309
Query: 430 RTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R LPKV Y A+D ++ + + + +LE+AAV++ +
Sbjct: 310 RASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR 348
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 183/289 (63%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 59 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 117
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 118 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 177
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W G+ ++ G+ + QF + K
Sbjct: 178 LKNFPMDIQTCIMQLESFGYTMNDLIFQWVKGQEAVQVAEGLTLPQFILRDEKDLGYCTK 237
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 238 SYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 297
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 298 LTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 346
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 52 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 110
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 111 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 170
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 171 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILKEEKDLRYCTKH 230
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 231 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 290
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 291 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 338
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 96 GYDARIRPNF-KGPAVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDD 154
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 155 SLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 214
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 215 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILKDESDLRYCTKH 274
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 275 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 334
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SRT LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 335 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 382
>gi|23308635|ref|NP_694497.1| glycine receptor subunit alpha-3 precursor [Danio rerio]
gi|14041784|emb|CAC38837.1| glycine receptor alphaZ3 subunit [Danio rerio]
Length = 450
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQFILKDESDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SRT LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY + + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVHIFLRQQWNDPRLAYNEYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 75 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVGHGLTLPQFILKEEKDLRYCTKH 194
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +AT R+GLGITTVL
Sbjct: 195 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVL 254
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 255 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 302
>gi|348536056|ref|XP_003455513.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Oreochromis
niloticus]
Length = 449
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 53 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSKYPDS 111
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI +DG +LYS+RLT+ +CPM
Sbjct: 112 SLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMD 171
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + + K
Sbjct: 172 LKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMRDEKELGYCTKH 231
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 232 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 291
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+A V++ ++
Sbjct: 292 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSR 339
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 54 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 112
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 113 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 172
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 173 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILKEEKDLRYCTKH 232
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 233 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 292
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 293 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 340
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 73 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 131
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 132 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 191
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 192 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 251
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 252 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 311
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 312 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 359
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMDTQ+C + L S+ Y + L++ W + + + QF + K
Sbjct: 175 LKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 235 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 342
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 62 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 120
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI++ G++LYS+R+T+ CPM
Sbjct: 121 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRSGNVLYSIRITLTLACPMD 180
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 181 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 240
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 241 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 300
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 301 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 348
>gi|190337591|gb|AAI63529.1| Glycine receptor, alpha 3 [Danio rerio]
Length = 450
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQFILKDESDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SRT LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 281 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPRLAYREYPDD 339
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI QDG +LYS+RLT+ +CPM
Sbjct: 340 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMD 399
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + + + QF + K
Sbjct: 400 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLKEEKDLGYCTKY 459
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 460 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 519
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 520 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 567
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY + + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVHIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVGHGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +AT R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|148700394|gb|EDL32341.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
Length = 435
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 188/301 (62%), Gaps = 24/301 (7%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM
Sbjct: 42 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDM---------------- 84
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 85 ----GPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 140
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 141 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 200
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 201 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 260
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + + + ++EFA V+YFTK
Sbjct: 261 RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRG 320
Query: 471 Y 471
Y
Sbjct: 321 Y 321
>gi|301607542|ref|XP_002933371.1| PREDICTED: glycine receptor subunit alpha-3-like [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ + S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI +DG++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQFVLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|348537425|ref|XP_003456195.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 455
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 26 GYDARIRPNF-KGSPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDD 84
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 85 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLTLSCPMD 144
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD+Q+C + L S+ Y + L++ W ++ + + QF + K
Sbjct: 145 LKNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCTKH 204
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F L+R GY++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 205 YNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVL 264
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 265 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 312
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPRLAYREYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI QDG +LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + + + QF + K
Sbjct: 175 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLKEEKDLGYCTKY 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 235 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 342
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 96 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDD 154
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 155 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 214
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMDTQ+C + L S+ Y + L++ W + + + QF + K
Sbjct: 215 LKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCTKH 274
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 275 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVL 334
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 335 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 382
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|218741191|dbj|BAH03471.1| gamma-aminobutyric acid receptor beta subunit [Lehmannia
valentiana]
Length = 504
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++NLLK Y P+ G G P I +++ S ISE++MDY++ Y +QYWR
Sbjct: 42 RNVTETIDNLLKGYDIRLRPSFG-GAPLEIGIEVILASFDSISEVNMDYTITMYLKQYWR 100
Query: 231 DSRLSFM--------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQ 282
D RL F+ I ++L+ EKIW PDT++ N K S++H +T NK++R+
Sbjct: 101 DERLQFLHESSDNDQDAIKTMTLTGAFAEKIWVPDTFLANDKNSFLHDVTEKNKMVRLYG 160
Query: 283 DGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPG 341
+G ++Y MR T C M L N+P+D Q C + + SY Y ++ +V +W + +++ V
Sbjct: 161 NGSLVYGMRSTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLSDRDAVTGVED 220
Query: 342 MAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSF 401
+++ QF + N + G++ L + F L+R GYF+ Q Y+P +LIV+LSWVSF
Sbjct: 221 VSLPQFSISNYATINKIEELLTGDYQRLSLIFQLQRSIGYFIFQTYLPSILIVMLSWVSF 280
Query: 402 WIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFA 461
WI+ EA+S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+A
Sbjct: 281 WINHEASSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 340
Query: 462 AVHY 465
AV+Y
Sbjct: 341 AVNY 344
>gi|357627557|gb|EHJ77210.1| ligand-gated chloride channel-like protein 3 [Danaus plexippus]
Length = 478
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 179/296 (60%), Gaps = 6/296 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N+T ++ +L Y PN G GEP + ++ I S ISE++MDY++ Y QYW+D
Sbjct: 40 NVTQTVSRILDGYDIRLRPNFG-GEPLYVGMDLTIASFDAISEVNMDYTITLYLNQYWKD 98
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL F L+LS +KIW PDT+ N K S++H +T NKL+R+ DG + Y MR
Sbjct: 99 ERLGFGMQDEVLTLSGDFADKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGGVTYGMR 158
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFDF 349
T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 159 FTATLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKDTP---VRGVEDAELPQFSI 215
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ + K G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EATS
Sbjct: 216 LGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 275
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 276 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 331
>gi|5725306|emb|CAB52399.1| unnamed protein product [Mus musculus]
Length = 449
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E +DY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTIDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|5725305|emb|CAB52398.1| unnamed protein product [Mus musculus]
Length = 457
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E +DY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTIDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|291385940|ref|XP_002709523.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 1
[Oryctolagus cuniculus]
Length = 464
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + LG++ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|281342623|gb|EFB18207.1| hypothetical protein PANDA_015554 [Ailuropoda melanoleuca]
Length = 397
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL+++ P +
Sbjct: 37 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDD 95
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 96 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 155
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 156 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 215
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 216 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 275
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 276 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 324
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 177/277 (63%), Gaps = 2/277 (0%)
Query: 194 KGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEK 252
KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L L ML+
Sbjct: 182 KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDS 241
Query: 253 IWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSC 312
IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM L+NFPMD Q+C
Sbjct: 242 IWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTC 301
Query: 313 PLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQV 371
+ L S+ Y + L++ W ++ G+ + QF + K G+F+ ++
Sbjct: 302 IMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEA 361
Query: 372 NFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRT 431
F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVLT++T S SR
Sbjct: 362 RFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRA 421
Query: 432 DLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 422 SLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 458
>gi|350536015|ref|NP_001234895.1| ligand-gated chloride channel homolog 3 precursor [Nasonia
vitripennis]
gi|269856291|gb|ACZ51428.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 512
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 180/296 (60%), Gaps = 6/296 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N+T ++ +L Y PN G G+P ++ ++ I S ISE++MDY++ Y QYW+D
Sbjct: 50 NVTQTISRILDGYDIRLRPNFG-GDPLFVEMDLTIASFDAISEVNMDYTITMYLNQYWKD 108
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
RL+F L+LS EKIW PDT+ N K S++H +T NKL+R+ DG + Y MR
Sbjct: 109 ERLAFSHEKEILTLSGDFAEKIWVPDTFFANDKHSFLHDVTERNKLVRLAGDGSVTYGMR 168
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFDF 349
T C M L +P+D+Q+C + + SY Y + +V W TP + V + QF
Sbjct: 169 FTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMSWKETP---VRGVDEAKLPQFTI 225
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
I + K G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EATS
Sbjct: 226 IGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 285
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 286 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 341
>gi|291385942|ref|XP_002709524.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 2
[Oryctolagus cuniculus]
Length = 449
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + LG++ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|301781106|ref|XP_002925968.1| PREDICTED: glycine receptor subunit alpha-4-like [Ailuropoda
melanoleuca]
Length = 457
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL+++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 180/290 (62%), Gaps = 3/290 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-P 239
+ Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 45 VSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYP 103
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
++L L ML+ IW+PD + N K + H +T NKLLRI+++G++LYS+R+T+ CP
Sbjct: 104 DDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACP 163
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF +
Sbjct: 164 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCT 223
Query: 360 KR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
K G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITT
Sbjct: 224 KHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITT 283
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
VLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ +
Sbjct: 284 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR 333
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 58 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDD 116
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 117 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 176
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 177 LKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 236
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 237 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 296
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 297 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 345
>gi|14010349|gb|AAK51962.1|AF362764_1 glycine receptor alpha 3 subunit [Mus musculus]
Length = 463
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 178/287 (62%), Gaps = 2/287 (0%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINN 242
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSYPDDS 114
Query: 243 LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSL 302
L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM L
Sbjct: 115 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 174
Query: 303 RNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR- 361
+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHY 234
Query: 362 REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLT 421
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITT LT
Sbjct: 235 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTDLT 294
Query: 422 LSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 341
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDA 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + + + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCTKH 235
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 236 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 295
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 188/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ L+K Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 42 VDRLMKGYDIRLRPDFG-GAPVAVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKRLSY 100
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 101 SEIAYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G+ ++S V + + QF +
Sbjct: 161 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGEGAVSGVDRIELPQFSIVDYKLI 220
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 221 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 278
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 279 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 330
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+ LGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+ LGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|296195142|ref|XP_002745250.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Callithrix
jacchus]
Length = 464
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 342
>gi|156368051|ref|XP_001627510.1| predicted protein [Nematostella vectensis]
gi|156214422|gb|EDO35410.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 177/300 (59%), Gaps = 7/300 (2%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N TLVL NLL+ Y P KGEP ++ +M + ++ + E++MD+++D Y RQYWRD
Sbjct: 21 NSTLVLKNLLEGYDRRIRPG-SKGEPVVVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRD 79
Query: 232 SRLSF--MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
RL F P L+LS + ++IW P TY L K++Y H +T N LL++ DG + YS
Sbjct: 80 ERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVTTDNYLLQVKPDGSLFYS 139
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP----GKSISFVPGMAIS 345
+RLTI +C + LR+FP DTQSC L L SY Y ++Y W +I + +
Sbjct: 140 IRLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERLDNTSAIYIHDDLELP 199
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QF+ + + K G S L NF +KR GYF+I Y+P +IV++SW+SFWI
Sbjct: 200 QFEVLGVSRSAKMNKYNIGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDP 259
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E R+ LGITTVLT++T+ +R +LPKV Y A+DW+LL+ + +ILE+ V Y
Sbjct: 260 ETAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLIFVFGSILEYTCVTY 319
>gi|296195144|ref|XP_002745251.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Callithrix
jacchus]
Length = 449
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 342
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RLS+ P N
Sbjct: 235 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYQEYPDN 293
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 294 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 353
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 354 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 413
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 414 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 473
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + A +LE+AAV++ ++
Sbjct: 474 LTMTTQSSGSRASLPKVSYVKAIDIWMAACLLFVFAALLEYAAVNFVSR 522
>gi|326914205|ref|XP_003203417.1| PREDICTED: glycine receptor subunit alpha-2-like [Meleagris
gallopavo]
Length = 410
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 174/274 (63%), Gaps = 2/274 (0%)
Query: 197 PTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWR 255
P + N+ I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML+ IW+
Sbjct: 28 PVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWK 87
Query: 256 PDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLI 315
PD + N K + H +T NKLLRI++ G +LYS+RLT+ +CPM L+NFPMD Q+C +
Sbjct: 88 PDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQ 147
Query: 316 LGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFN 374
L S+ Y + L++ W + G+ + QF + + K G+F+ ++V F+
Sbjct: 148 LESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGKFTCIEVKFH 207
Query: 375 LKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLP 434
L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR LP
Sbjct: 208 LERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLP 267
Query: 435 KVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
KV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 268 KVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 301
>gi|47214123|emb|CAG01381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 323
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/285 (44%), Positives = 181/285 (63%), Gaps = 12/285 (4%)
Query: 169 IGKNITL---VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDM-----DYS 220
I NIT+ +L+ LL Y + P G+ + T IKTN+ + S GP+S+ +M +Y+
Sbjct: 40 INDNITIFTRILDGLLDGYDNRLRPGLGE-KVTEIKTNIFVTSFGPVSDTEMSWLLQEYT 98
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
+D +FRQ W+D RL F GP+ L L+ + IW PDT+ LNGK+S H +T PNKLLR+
Sbjct: 99 IDVFFRQSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRL 158
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFV- 339
DG +LY+MRLTI A CPM L +FPMD +CPL GSYAYP+ ++VY WT + S V
Sbjct: 159 KDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKEAAKSVVV 218
Query: 340 --PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
G ++Q+ I G+++++ +F LKR GYFVIQ Y+PC + V+LS
Sbjct: 219 AEEGSRLNQYHLIGQTAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILS 278
Query: 398 WVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATAL 442
VSFW++RE+ R +TTVLT++T+S+ +R LPKV YATA+
Sbjct: 279 QVSFWLNRESVPARTVFRVTTVLTMTTLSISARNSLPKVAYATAM 323
>gi|410896852|ref|XP_003961913.1| PREDICTED: glycine receptor subunit alpha-2-like [Takifugu
rubripes]
Length = 454
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 59 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDP 117
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 118 SLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 177
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + + K
Sbjct: 178 LKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSDGLTLPQFIMRDEKELGYCTKH 237
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 238 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 297
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+A V++ ++
Sbjct: 298 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSR 345
>gi|260812497|ref|XP_002600957.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
gi|229286247|gb|EEN56969.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
Length = 428
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 176/304 (57%), Gaps = 11/304 (3%)
Query: 170 GKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
G ++ L+ LL+ Y + PN KGE + ++ + S G I+E MDY ++ + RQ W
Sbjct: 34 GPTPSVFLDKLLEKYDARIRPNF-KGEAVNVSVDIFVNSFGSIAETTMDYRVNIFLRQRW 92
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D RL FM +LSL +L KIW PD + N K + H +T NKLLRI+ GDILYS
Sbjct: 93 NDPRLKFMDYNESLSLDTSLLRKIWVPDLFFANEKGANFHAVTTENKLLRISPAGDILYS 152
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
+RLT+ CPM L+ FPMD Q C + L S+ Y L + W + + + QF
Sbjct: 153 IRLTLTLACPMRLQRFPMDRQQCNMQLESFGYSTSDLNFRWKNDNPVQLSEDLELPQFKV 212
Query: 350 ISSPKRNFTFKRRE-----GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
+T R + G F+ ++ FNL R GY++IQ Y+P +LIV+LSWVSFWI+
Sbjct: 213 -----EGYTLTRCDKTYNTGIFTCIEAQFNLVRQMGYYLIQTYIPSLLIVILSWVSFWIN 267
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
+A R+ LGITTVLT++T S SR LPKV Y A+D ++ + + A +LEFAAV+
Sbjct: 268 MDAAPARVALGITTVLTMTTQSSGSRAQLPKVSYVKAIDIWMAVCLLFVFAALLEFAAVN 327
Query: 465 YFTK 468
+ ++
Sbjct: 328 FVSR 331
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 53 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 111
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 112 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 171
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 172 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 231
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 232 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 291
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 292 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 340
>gi|120781|sp|P26714.1|GBRB_LYMST RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|9627|emb|CAA41495.1| GABA-A receptor beta subunit [Lymnaea stagnalis]
Length = 499
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 187/305 (61%), Gaps = 12/305 (3%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
N+T +++LLK Y P+ G G P I +++ S ISE+DMDY++ Y QYWRD
Sbjct: 32 NVTNTIDSLLKGYDIRLRPSFG-GAPLEIGIEVILASFDSISEVDMDYTITMYLNQYWRD 90
Query: 232 SRLSFM----------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRIN 281
RL F+ + ++L+ EKIW PDT++ N K S++H IT NK++R+
Sbjct: 91 ERLQFIFNESLDLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKMVRLY 150
Query: 282 QDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVP 340
+G ++Y MR T C M L N+P+D Q C + + SY Y ++ +V +W + +++ V
Sbjct: 151 GNGSLVYGMRFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLNDRGAVTGVE 210
Query: 341 GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVS 400
+++ QF + N + G++ L + F L+R+ GYF+ Q Y+P +LIV+LSWVS
Sbjct: 211 DVSLPQFSITNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVS 270
Query: 401 FWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEF 460
FWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+
Sbjct: 271 FWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 330
Query: 461 AAVHY 465
AAV+Y
Sbjct: 331 AAVNY 335
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 52 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 110
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 111 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 170
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ + + QF + K
Sbjct: 171 LKNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQFILKEEKDLRYCTKH 230
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 231 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 290
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 291 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 338
>gi|327281228|ref|XP_003225351.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Anolis carolinensis]
Length = 447
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 14 VDRLLKGYDIRLRPDFG-GSPVDVGMRIEIASIDMVSEVNMDYTLTMYFQQSWRDKRLSY 72
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ + +W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 73 SGIPLNLTLDNRVADNLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 132
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + + ++W G+S +S V + + QF +
Sbjct: 133 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVSKIELPQFSIMDYRMI 192
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 193 SKRVEFATGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALG 252
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
ITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 253 ITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 302
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|18448711|gb|AAL69899.1|AF462147_1 glycine receptor alpha 4 subunit [Mus musculus]
Length = 416
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L+ MLE IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 75 SLDLNPSMLESIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 194
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 195 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 254
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 255 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 303
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 181/288 (62%), Gaps = 4/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 76 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWHDPRLAYQEYPDD 134
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 135 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 194
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF ++ K
Sbjct: 195 LKNFPMDIQTCIMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLSYCTK 254
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 255 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 314
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ +
Sbjct: 315 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVS 362
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 187/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ L+K Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 42 VDRLMKGYDIRLRPDFG-GAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 100
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 101 SEIAYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G ++S V + + QF +
Sbjct: 161 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVDKIELPQFSIVDYKLI 220
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 221 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 278
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 279 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 330
>gi|817957|emb|CAA53468.1| glycine receptor subunit alpha 4 [Mus musculus]
Length = 337
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 33 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 91
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 92 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 151
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 152 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 211
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 212 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 271
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 272 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 320
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 195/301 (64%), Gaps = 10/301 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
NI++V ++ LLK Y P+ G G+P + ++ I S+ ISE++MDY++ YF+Q
Sbjct: 38 NISVVKKTVDKLLKGYDIRLRPDFG-GDPVSVGMSIHISSIDQISEVNMDYTITMYFQQS 96
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RL++ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY
Sbjct: 97 WRDKRLAYTALPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLY 156
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK--SISFVPGMAISQ 346
+R+T A C M LR +P+D Q+C L + SY Y I+ + + W G+ +++ V + + Q
Sbjct: 157 GLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQ 216
Query: 347 FDFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
F I + +N F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 217 FTIIETRLVSKNVVFT--TGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWIN 274
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
+A++ R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+
Sbjct: 275 YDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVN 334
Query: 465 Y 465
Y
Sbjct: 335 Y 335
>gi|126331665|ref|XP_001364516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Monodelphis domestica]
Length = 475
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+S +S V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVNNIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 NYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|121580|sp|P24524.1|GLRA3_RAT RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|204883|gb|AAA63492.1| inhibitory glycine receptor alpha subunit [Rattus norvegicus]
Length = 464
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 26 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQA 84
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 85 WRDKRLSYSDIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 144
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 145 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQF 204
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 205 SIVDHKLISKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 262
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 263 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNY 322
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|348566767|ref|XP_003469173.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit
alpha-3-like [Cavia porcellus]
Length = 480
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 72 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 130
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 131 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 190
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 191 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 250
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 188/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LL+ Y P+ G G P + ++ I S+ +SE++MDY++ YF+QYWRD RL++
Sbjct: 36 VDKLLEGYDIRLRPDFG-GPPVCVGMSIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAY 94
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N ++R++ DG +LY +R+T A
Sbjct: 95 AGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNSMIRLHPDGTVLYGLRITTTA 154
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G S ++ V + + QF +
Sbjct: 155 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDSAVTGVERIELPQFSIVEYRLV 214
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 215 SKNVVFA--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 272
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 273 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 324
>gi|334331046|ref|XP_001371691.2| PREDICTED: glycine receptor subunit alpha-3 [Monodelphis domestica]
Length = 477
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 68 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 126
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 127 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 186
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 187 LKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAPVQVAEGLTLPQFVLKEEKDLRYCTKH 246
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 247 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 306
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 307 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 354
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|332026036|gb|EGI66187.1| Gamma-aminobutyric acid receptor subunit beta-like protein
[Acromyrmex echinatior]
Length = 460
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 182/297 (61%), Gaps = 6/297 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L Y PN G G+P + ++ I S ISE++MDY++ Y QYW+
Sbjct: 6 ENVTQTISRILDGYDIRLRPNFG-GDPLRVGMDLTIASFDAISEVNMDYTITMYLNQYWK 64
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL+F L+LS EKIW PDT+ N K S++H +T NKL+R++ DG I Y M
Sbjct: 65 DERLAFSHEGEILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSITYGM 124
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFD 348
R T C M L +P+D+Q+C + + SY Y + ++ +W TP + V + QF
Sbjct: 125 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVLMYWKETP---VHGVKEAELPQFT 181
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
I + K G + L ++F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 182 IIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINYEAT 241
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 242 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 298
>gi|410915546|ref|XP_003971248.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 460
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 26 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDD 84
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 85 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 144
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD+Q+C + L S+ Y + L++ W ++ + + QF + K
Sbjct: 145 LKNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCTKH 204
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F L+R GY++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 205 YNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVL 264
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 265 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 312
>gi|326918628|ref|XP_003205590.1| PREDICTED: glycine receptor subunit alpha-3-like [Meleagris
gallopavo]
Length = 486
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 182/294 (61%), Gaps = 3/294 (1%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
L + Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++
Sbjct: 89 LMGRMSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAY 147
Query: 237 MG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
P ++L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+
Sbjct: 148 SEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 207
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKR 355
+CPM L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF
Sbjct: 208 LSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLKEEKDL 267
Query: 356 NFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGL 414
+ K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ L
Sbjct: 268 CYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVAL 327
Query: 415 GITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
GITTVLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 328 GITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 381
>gi|338729463|ref|XP_001489094.3| PREDICTED: glycine receptor subunit alpha-4-like [Equus caballus]
Length = 457
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|31322540|gb|AAP22967.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 464
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|149757789|ref|XP_001505124.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Equus
caballus]
Length = 490
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 183/295 (62%), Gaps = 2/295 (0%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +LN++L NY P G+ +PT++ + + ++GPIS +DM+Y++D F Q W D R
Sbjct: 73 TQILNSILNNYDHKLRPGIGE-KPTVVTVELSVNTLGPISILDMEYTIDITFYQTWYDER 131
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L + G + LS M+ ++W PDT+ N K++ H IT+PN+++RI++DG +LY++R+T
Sbjct: 132 LRYNGSFESFVLSGNMVSQLWIPDTFFRNSKRTQEHMITMPNQMVRIHKDGKVLYTIRMT 191
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISS 352
I A C + + FPMD+ SCPL S++YP +++Y W + I + QFDF
Sbjct: 192 IDAGCSLHMLKFPMDSHSCPLSFSSFSYPENEMIYKWENFEVEIHENNSWKLFQFDFTGV 251
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
T + G+F ++ + FN+ RH G+ Q Y+P + ++SWVSFWI +E+ R
Sbjct: 252 SNETETISTQAGDFMVMTLFFNVSRHFGFVTFQNYIPSFVTTMVSWVSFWIKKESAPART 311
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
LG+T+VLT++T+ SR + P+V Y T LD+++ M FF+C ++EFA +++ T
Sbjct: 312 SLGVTSVLTMTTLGTFSRRNFPRVSYITTLDFYIAMCFFFCFCALMEFAVLNFLT 366
>gi|224098606|ref|XP_002187221.1| PREDICTED: glycine receptor subunit alpha-4 [Taeniopygia guttata]
Length = 418
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 19 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 77
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 78 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 137
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W +++ G+ + QF + K
Sbjct: 138 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCTK 197
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 198 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 257
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 258 LTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 306
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 188/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ L+K Y P+ G G P ++ N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 39 VDRLMKGYDIRLRPDFG-GAPVAVRMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 97
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 98 SEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G ++S V + + QF +
Sbjct: 158 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVGYKLI 217
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 218 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 275
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 327
>gi|449500541|ref|XP_002188642.2| PREDICTED: glycine receptor subunit alpha-3 [Taeniopygia guttata]
Length = 434
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 181/290 (62%), Gaps = 3/290 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-P 239
+ Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 33 MSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYP 91
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
++L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CP
Sbjct: 92 DDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCP 151
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF +
Sbjct: 152 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLKEEKDLCYCT 211
Query: 360 KR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITT
Sbjct: 212 KHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 271
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
VLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 272 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 321
>gi|354493194|ref|XP_003508728.1| PREDICTED: glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 464
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|344288255|ref|XP_003415866.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Loxodonta
africana]
Length = 449
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|395542827|ref|XP_003773326.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Sarcophilus harrisii]
Length = 475
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+S +S V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVNNIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|268833702|ref|NP_001161371.1| glycine receptor subunit alpha-2 precursor [Danio rerio]
gi|262478803|gb|ACY68415.1| glycine receptor alpha 2 subunit [Danio rerio]
Length = 448
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 54 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSEYPDS 112
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI +DG +LYS+RLT+ +CPM
Sbjct: 113 SLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMD 172
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 173 LKNFPMDVQTCTMQLESFGYTMNDLIFEWLDKGPVQVADGLTLPQFLIRDEKDLGYCTKH 232
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 233 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 292
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+A V++ ++
Sbjct: 293 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSR 340
>gi|344288257|ref|XP_003415867.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Loxodonta
africana]
Length = 464
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 24 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 82
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 83 SLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 142
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W +++ G+ + QF + K
Sbjct: 143 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCTK 202
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 203 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 262
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 263 LTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 311
>gi|431918319|gb|ELK17546.1| Glycine receptor subunit alpha-3 [Pteropus alecto]
Length = 415
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|410956542|ref|XP_003984901.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Felis catus]
Length = 464
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|403285190|ref|XP_003933918.1| PREDICTED: glycine receptor subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 464
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|351694568|gb|EHA97486.1| Glycine receptor subunit alpha-3 [Heterocephalus glaber]
Length = 464
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|350592347|ref|XP_003483449.1| PREDICTED: glycine receptor subunit alpha-3 [Sus scrofa]
Length = 464
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|73993734|ref|XP_543200.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 464
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|149698066|ref|XP_001498366.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Equus
caballus]
Length = 464
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|300793839|ref|NP_001178843.1| glycine receptor subunit alpha-4 precursor [Rattus norvegicus]
Length = 456
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 190/319 (59%), Gaps = 13/319 (4%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPI 212
PK S + D ++G+ Y + PN KG P + N+ I S G +
Sbjct: 35 PKGSQPMSPSDFLDKLMGRT---------SGYDARIRPNF-KGPPVNVTCNIFINSFGSV 84
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
+E MDY ++ + RQ W D RL++ P ++L L ML+ IW+PD + N K + H +
Sbjct: 85 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEV 144
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW- 330
T NKLLRI ++G++LYS+RLT+ +CPM L+NFPMD Q+C + L S+ Y + L++ W
Sbjct: 145 TTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWL 204
Query: 331 TPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVP 389
++ G+ + QF + K G+F+ ++V F+L+R GY++IQ+Y+P
Sbjct: 205 EDAPAVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIP 264
Query: 390 CVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMS 449
+LIV+LSWVSFWI+ +A R+GLGITTVLT++T S SR LPKV Y A+D ++ +
Sbjct: 265 SLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Query: 450 FFYCIATILEFAAVHYFTK 468
+ A +LE+AAV++ ++
Sbjct: 325 LLFVFAALLEYAAVNFVSR 343
>gi|110347433|ref|NP_001036008.1| glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]
gi|149698068|ref|XP_001498338.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Equus
caballus]
gi|332820616|ref|XP_003310621.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
troglodytes]
gi|395735507|ref|XP_003776595.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pongo
abelii]
gi|397505897|ref|XP_003823477.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
paniscus]
gi|426346045|ref|XP_004040700.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Gorilla
gorilla gorilla]
gi|3342236|gb|AAC39917.1| glycine receptor alpha 3 subunit [Homo sapiens]
gi|119625136|gb|EAX04731.1| glycine receptor, alpha 3, isoform CRA_b [Homo sapiens]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|345790724|ref|XP_003433410.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|110347441|ref|NP_006520.2| glycine receptor subunit alpha-3 isoform a precursor [Homo sapiens]
gi|109076221|ref|XP_001088083.1| PREDICTED: glycine receptor subunit alpha-3-like [Macaca mulatta]
gi|114596937|ref|XP_517543.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
troglodytes]
gi|297674705|ref|XP_002815347.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pongo
abelii]
gi|397505899|ref|XP_003823478.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
paniscus]
gi|426346047|ref|XP_004040701.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Gorilla
gorilla gorilla]
gi|116242496|sp|O75311.2|GLRA3_HUMAN RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|23241723|gb|AAH36086.1| Glycine receptor, alpha 3 [Homo sapiens]
gi|119625135|gb|EAX04730.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|119625137|gb|EAX04732.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|123980142|gb|ABM81900.1| glycine receptor, alpha 3 [synthetic construct]
gi|123994945|gb|ABM85074.1| glycine receptor, alpha 3 [synthetic construct]
gi|355687730|gb|EHH26314.1| hypothetical protein EGK_16247 [Macaca mulatta]
gi|355749674|gb|EHH54073.1| hypothetical protein EGM_14823 [Macaca fascicularis]
Length = 464
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|395542375|ref|XP_003773108.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 481
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 72 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 130
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 131 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 190
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 191 LKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAPVQVAEGLTLPQFVLKEEKDLRYCTKH 250
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|3342792|gb|AAC39919.1| glycine receptor alpha 3 subunit [Homo sapiens]
Length = 465
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|281341890|gb|EFB17474.1| hypothetical protein PANDA_011670 [Ailuropoda melanoleuca]
Length = 442
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 36 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 94
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 95 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 154
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 155 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 214
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 215 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 274
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 275 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 322
>gi|155369743|ref|NP_446176.3| glycine receptor subunit alpha-3 [Rattus norvegicus]
gi|13548663|emb|CAC35982.1| glycine receptor alpha 3 precursor [Rattus norvegicus]
Length = 480
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 72 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 130
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 131 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 190
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 191 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 250
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|50746507|ref|XP_420527.1| PREDICTED: glycine receptor subunit alpha-3 [Gallus gallus]
Length = 463
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 181/290 (62%), Gaps = 3/290 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-P 239
+ Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 70 MSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYP 128
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
++L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CP
Sbjct: 129 DDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCP 188
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF +
Sbjct: 189 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLKEEKDLCYCT 248
Query: 360 KR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITT
Sbjct: 249 KHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 308
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
VLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 309 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|332217779|ref|XP_003258041.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Nomascus
leucogenys]
Length = 464
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|301774518|ref|XP_002922678.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Ailuropoda melanoleuca]
Length = 462
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|550337|emb|CAA51326.1| GABA-A receptor beta 2 subunit [Gallus gallus]
Length = 430
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|410956544|ref|XP_003984902.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Felis catus]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 134 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDD 192
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKLLRI+++G++LYS+R+T+ CPM
Sbjct: 193 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMD 252
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ + + QF + K
Sbjct: 253 LKNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQFILKEEKDLRYCTKH 312
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 313 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 372
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 373 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 420
>gi|441619761|ref|XP_004088614.1| PREDICTED: glycine receptor subunit alpha-3 [Nomascus leucogenys]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D R ++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRXAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKL RI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLXRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|120300936|ref|NP_536686.2| glycine receptor subunit alpha-3 [Mus musculus]
gi|147897779|gb|AAI40462.1| Glycine receptor, alpha 3 subunit [synthetic construct]
gi|148696654|gb|EDL28601.1| glycine receptor, alpha 3 subunit [Mus musculus]
gi|151555313|gb|AAI48712.1| Glycine receptor, alpha 3 subunit [synthetic construct]
Length = 480
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 72 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 130
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 131 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 190
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 191 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 250
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|350592345|ref|XP_003132880.3| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Sus scrofa]
Length = 449
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|301607832|ref|XP_002933494.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Xenopus (Silurana) tropicalis]
Length = 477
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 186/292 (63%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G + + + S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPSVEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G K+I+ V + + QF I
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGDKAITGVEKIELPQFSIIDYKMV 219
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
RN F G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+
Sbjct: 220 SRNVIFS--TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVA 277
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 278 LGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|157127002|ref|XP_001661036.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3, putative
[Aedes aegypti]
gi|108873057|gb|EAT37282.1| AAEL010710-PA [Aedes aegypti]
Length = 468
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 185/312 (59%), Gaps = 21/312 (6%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L+ Y PN G G+P + ++ I S ISE++MDY++ Y QYW+
Sbjct: 7 ENVTQTISRILEGYDIRLRPNFG-GDPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWK 65
Query: 231 DSRLSFM---------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPN 275
D RL+F G + ++LS EKIW PDT+ N K S++H +T N
Sbjct: 66 DERLAFNARQYDQNGDIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 125
Query: 276 KLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPG 333
KL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + ++ +W TP
Sbjct: 126 KLVRLAGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVLMYWRSTP- 184
Query: 334 KSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
I V + QF I + + GE+ L ++F L+R+ GYFV Q Y+P +LI
Sbjct: 185 --IRGVEEAELPQFTIIGYETNDRKERLATGEYQRLSLSFKLQRNIGYFVFQTYLPSILI 242
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F +
Sbjct: 243 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 302
Query: 454 IATILEFAAVHY 465
A +LE+AAV+Y
Sbjct: 303 FAALLEYAAVNY 314
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 88 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYWVNVFLRQQWNDPRLAYQEYPDD 146
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 147 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLMLSCPMD 206
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 207 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 266
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 267 NYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 326
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 327 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 375
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D R ++ P +
Sbjct: 51 GYDARIRPNF-KGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRXAYNEYPDD 109
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K ++ H IT NKL RI+++G++LYS+R+T+ CPM
Sbjct: 110 SLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLXRISRNGNVLYSIRITLTLACPMD 169
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 170 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKH 229
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++ F+L+R GY++IQ+Y+P +LIV+LSW+SFWI+ +A R+GLGITTVL
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 337
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 195/308 (63%), Gaps = 4/308 (1%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P ++ ++ I S+ ISE++MDY++ YF+Q WRD RL++
Sbjct: 8 VDKLLKGYDIRLRPDFG-GPPVVVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 66
Query: 237 MGPIN-NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
G +N NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 67 -GELNLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 125
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPK 354
A C M LR +P+D Q+C L + SY Y + +V+ W G +++ V + + QF +++
Sbjct: 126 AACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWEGGDNAVTGVDKLELPQFSIVATQL 185
Query: 355 RNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGL 414
+ G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ L
Sbjct: 186 VSKEVIFTTGAYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 245
Query: 415 GITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCYPGY 474
G+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y P
Sbjct: 246 GVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQ 305
Query: 475 PSGFIERL 482
ERL
Sbjct: 306 QKKLSERL 313
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|301774520|ref|XP_002922679.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Ailuropoda melanoleuca]
Length = 447
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|284795247|ref|NP_001165353.1| glycine receptor precursor [Ciona intestinalis]
gi|283945411|dbj|BAI66458.1| glycine receptor [Ciona intestinalis]
Length = 491
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 2/299 (0%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
K T L+NL Y P+H K P + N+ + S G I+E MDY ++ + R W
Sbjct: 80 KKATYFLDNLFNGYDQRIRPHH-KRSPVNVTVNIFVNSFGSIAETTMDYRVNIFLRCRWN 138
Query: 231 DSRLSFMG-PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
D R++F G + ++L MLE IWRPD + N K + H +T NKLLRI ++GD+ S
Sbjct: 139 DQRMAFTGFDEDAVALHPSMLENIWRPDLFFANEKHANFHEVTTENKLLRIYKNGDVYSS 198
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDF 349
+RL++ C M L+NFPMD Q+C + L S+ Y + L + W + P + + QF
Sbjct: 199 VRLSLTLACAMHLQNFPMDIQTCKMQLESFGYDMRDLAFQWQEDLPVQLPPSLTLPQFRI 258
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ + T G F+ ++V+F L+R GY+VIQ YVP LIV+LSWVSFWI+ EA
Sbjct: 259 LGYKLGSCTKVYNTGSFTCIEVSFILERQMGYYVIQTYVPSALIVILSWVSFWINMEAAP 318
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R LGITTVLT++T S +R LPKV Y A+D ++ + + A +LEFA V++ ++
Sbjct: 319 ARTALGITTVLTMTTQSSGARASLPKVSYVKAIDTWMAVCLLFVFAALLEFAVVNFLSR 377
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDA 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + + + QF + K
Sbjct: 175 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 235 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + A +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLIVFAALLEYAAVNFVSR 342
>gi|148744735|gb|AAI42873.1| Unknown (protein for IMAGE:7452885) [Danio rerio]
Length = 427
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 34 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQA 92
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 93 WRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 152
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 153 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTGVERIELPQF 212
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 213 SIVDYKLISKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 270
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNY 330
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 211 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 268
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 182/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 36 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 94
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 95 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 154
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W +++ G+ + QF + K
Sbjct: 155 LKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCTK 214
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 215 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 274
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 275 LTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 323
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 187/290 (64%), Gaps = 2/290 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P I+ ++ I S+ ISE++MDY++ YF+Q WRD RL++
Sbjct: 15 VDKLLKGYDIRLRPDFG-GPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 73
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T A
Sbjct: 74 AEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + +V+ W G +++ V + + QF +
Sbjct: 134 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVELRLV 193
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 194 SREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 253
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 254 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 303
>gi|149033178|gb|EDL87985.1| similar to Glycine receptor alpha-4 chain precursor (predicted)
[Rattus norvegicus]
Length = 416
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 75 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 194
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 195 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 254
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 255 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 303
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 192/300 (64%), Gaps = 9/300 (3%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 31 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 89
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 90 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 149
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 150 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 209
Query: 348 DFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
+ +N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 210 SIVDYKLITKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINY 267
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+A++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 268 DASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 327
>gi|327268587|ref|XP_003219078.1| PREDICTED: glycine receptor subunit alpha-3-like [Anolis
carolinensis]
Length = 462
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 181/290 (62%), Gaps = 3/290 (1%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-P 239
+ Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P
Sbjct: 65 MSGYDARIRPNF-KGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYP 123
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
++L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CP
Sbjct: 124 DDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCP 183
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF 359
M L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF +
Sbjct: 184 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGAVQVADGLTLPQFLLKEDKDLVYCT 243
Query: 360 KR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITT
Sbjct: 244 KHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 303
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
VLT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 304 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 353
>gi|194248074|ref|NP_034427.2| glycine receptor subunit alpha-4 precursor [Mus musculus]
gi|78099775|sp|Q61603.3|GLRA4_MOUSE RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
gi|70997254|gb|AAZ17380.1| glycine receptor alpha4 subunit [Mus musculus]
Length = 456
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 175 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 234
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 235 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 294
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 295 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 343
>gi|242021134|ref|XP_002431001.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212516225|gb|EEB18263.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 467
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 180/298 (60%), Gaps = 7/298 (2%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N++ +++ LL+ Y PN G G+P + +M I S ISE++MDY++ Y QYW+
Sbjct: 19 ENVSQIISKLLQGYDIRLRPNFG-GDPLYVGMDMTIASFDSISEVNMDYTITMYLDQYWK 77
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITV-PNKLLRINQDGDILYS 289
D RL+F L+L+ EKIW PDT+ N K Y V PNKL+R+N DG I Y
Sbjct: 78 DERLAFSTDDETLTLAGDFAEKIWVPDTFFANDKNRYGFRFLVKPNKLVRLNGDGSITYG 137
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQF 347
MR T C M L +P+D+Q+C + + SY Y + +V +W TP + V + QF
Sbjct: 138 MRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKDTPVRG---VEKAQLPQF 194
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
I + G + L ++F L+R+ GYF+ Q Y+P +LIV+LSWVSFWI+ EA
Sbjct: 195 TIIGYETNDRKESLATGIYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEA 254
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
TS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 255 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 312
>gi|83405071|gb|AAI10631.1| Glycine receptor, alpha 4 subunit [Mus musculus]
gi|148691927|gb|EDL23874.1| glycine receptor, alpha 4 subunit [Mus musculus]
Length = 416
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 75 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 194
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 195 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 254
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 255 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 303
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 16 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 74
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 75 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 134
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 135 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 194
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 195 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 254
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 255 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 303
>gi|410915040|ref|XP_003970995.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 525
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 187/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 44 VDRLLKGYDIRLRPDFG-GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 102
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 103 SEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 162
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 163 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQFSIVDHKLI 222
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 223 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 280
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 281 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNY 332
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|256682097|gb|ACV07675.1| mutant GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 176/303 (58%), Gaps = 5/303 (1%)
Query: 170 GKNITLVLNNLL-KNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
G+NIT +LN + Y PN+G G P + M I S+ +SE+ MD++ D YFRQ
Sbjct: 40 GQNITQILNAFFTRGYDRRVRPNYG-GVPVEVGVTMQIISISTVSEVQMDFTSDFYFRQS 98
Query: 229 WRDSRLSFMGP--INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
WRD RLSF + ++++ ++ E+IW PDT+ N K +Y H T PN LRI G++
Sbjct: 99 WRDERLSFQKSPDLESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPNTFLRIGSGGEV 158
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAIS 345
S+RLT+ A+CPM LR FPMD Q+C + + S+ Y ++ + Y W+ G S+ + +
Sbjct: 159 FRSIRLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDTSVRIAKEVELP 218
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QF + ++ G +S L R GY++IQ+Y+P LIVV+SWVSFW+HR
Sbjct: 219 QFKVLGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHR 278
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
A+ R+ LG+ TVLT++T+ + LPK+ Y ++D +L F +LE+AAV Y
Sbjct: 279 NASPARVALGVLTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALLEYAAVGY 338
Query: 466 FTK 468
K
Sbjct: 339 LGK 341
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|410957678|ref|XP_003985452.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Felis catus]
Length = 476
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDKLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|355777890|gb|EHH62926.1| GABA(A) receptor subunit gamma-3, partial [Macaca fascicularis]
Length = 424
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 170/302 (56%), Gaps = 25/302 (8%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
++TL+LN LL+ Y P+ G +Y +D +F Q W D
Sbjct: 28 DVTLILNKLLREYDKKLRPDIG------------------------EYQIDIFFAQTWTD 63
Query: 232 SRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR 291
SRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++R
Sbjct: 64 SRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLR 123
Query: 292 LTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFI 350
LTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF+
Sbjct: 124 LTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFM 183
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 184 GLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPA 243
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLC 470
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 244 RTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 303
Query: 471 YP 472
P
Sbjct: 304 KP 305
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + L++ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 187/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ L+K Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 39 VDRLMKGYDIRLRPDFG-GAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 97
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 98 SEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G ++S V + + QF +
Sbjct: 158 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLI 217
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 218 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 275
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 327
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|354491372|ref|XP_003507829.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cricetulus griseus]
Length = 472
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 187/292 (64%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 36 VDRLLKGYDIRLRPDFG-GPPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 94
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 95 SEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 154
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF +
Sbjct: 155 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSIVDHKLI 214
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+
Sbjct: 215 SKNVVFS--TGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVA 272
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 273 LGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 324
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|432899526|ref|XP_004076602.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 505
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 73 GYDARIRPNF-KGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDD 131
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM
Sbjct: 132 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMD 191
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD+Q C + L S+ Y + L++ W ++ + + QF + K
Sbjct: 192 LKNFPMDSQMCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCTKY 251
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F L+R GY++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVL
Sbjct: 252 YNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVL 311
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 312 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 359
>gi|14041786|emb|CAC38838.1| glycine receptor alphaZ4 subunit [Danio rerio]
Length = 426
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 173/276 (62%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L L ML+ I
Sbjct: 1 GPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDLDPSMLDSI 60
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI Q+G++LYS+RLT+ +CPM L+NFPMDTQ+C
Sbjct: 61 WKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCT 120
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + + + QF + K G+F+ ++V
Sbjct: 121 VQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCAKHYNTGKFTCIEVK 180
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R Y++IQ+Y+P +L V+LSWVSFWI+ +A R+GLGITTVLT++T S SR
Sbjct: 181 FHLERQMAYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRAS 240
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 241 LPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 276
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 175/276 (63%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S+G I+E MDY ++ + RQ W D RL++ P ++L L ML+ I
Sbjct: 77 GPPVNVTCNIFINSVGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSI 136
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM L+NFPMD Q+C
Sbjct: 137 WKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCI 196
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + G+ + QF + K G+F+ ++V
Sbjct: 197 MQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVR 256
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR
Sbjct: 257 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 316
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 317 LPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 352
>gi|395843747|ref|XP_003794635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Otolemur garnettii]
Length = 474
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|24943213|gb|AAN65376.1| GABA-A receptor subunit [Caenorhabditis elegans]
Length = 550
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 172/278 (61%), Gaps = 3/278 (1%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSI 247
P G G+ ++ +++I S ISE+DMDY++ Y QYW D RL + PI+ ++LS
Sbjct: 71 PGFG-GDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSG 129
Query: 248 KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPM 307
+ + IW PDT++ N K SY+H +T NK+LRIN DG + Y MRLT +C M+LRNF +
Sbjct: 130 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFSL 189
Query: 308 DTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFS 367
D+Q+C + + SY Y +++ W ++ V + QF + G +
Sbjct: 190 DSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQ 249
Query: 368 LLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISL 427
L + F L+R GYF+ + Y+PC LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS
Sbjct: 250 RLSLVFQLRRSVGYFIFETYLPCDLIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 309
Query: 428 DSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LP++ Y ++D +L+M F + A +LE+AAV+Y
Sbjct: 310 GVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 347
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQPWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|119578058|gb|EAW57654.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_b
[Homo sapiens]
Length = 409
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 178/266 (66%), Gaps = 5/266 (1%)
Query: 203 NMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILN 262
N+ I S+ +SE++MDY++ YF+QYWRD RL++ G NL+L ++ +++W PDTY LN
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLN 61
Query: 263 GKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYP 322
K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D Q+C L + SY Y
Sbjct: 62 DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYT 121
Query: 323 IEKLVYHWTPG-KSISFVPGMAISQFDFISSP--KRNFTFKRREGEFSLLQVNFNLKRHR 379
+ + ++W G K+++ V + + QF + RN F G + L ++F LKR+
Sbjct: 122 TDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFA--TGAYPRLSLSFRLKRNI 179
Query: 380 GYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYA 439
GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITTVLT++TI+ R LPK+ Y
Sbjct: 180 GYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYV 239
Query: 440 TALDWFLLMSFFYCIATILEFAAVHY 465
A+D +L+ F + +LE+A V+Y
Sbjct: 240 KAIDMYLMGCFVFVFLALLEYAFVNY 265
>gi|449500680|ref|XP_002194324.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Taeniopygia guttata]
Length = 442
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LL+ Y P+ G G P + + I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 8 VDRLLQGYDIRLRPDFG-GPPVDVGMRIEIASIDVVSEVNMDYTLTMYFQQSWRDKRLSY 66
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++W PDTY N K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 67 SGIPLNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + + ++W G+S ++ V + + QF +
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVTGVNNIELPQFSIVDYKMV 186
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 187 SKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALG 246
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
ITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 247 ITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 296
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|431909787|gb|ELK12933.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 352
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 177/293 (60%), Gaps = 16/293 (5%)
Query: 192 HGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKML 250
H G P + N+ I S G ++E MDY ++ + RQ W DSRL++ P ++L L ML
Sbjct: 9 HSAGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSML 68
Query: 251 EKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMR--------------LTIKA 296
+ IW+PD + N K + H +T NKLLRI+++G +LYS+R LT+
Sbjct: 69 DSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRNMVSVFLEQPTEARLTLTL 128
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRN 356
+CPM L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF +
Sbjct: 129 SCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELG 188
Query: 357 FTFKR-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ K G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LG
Sbjct: 189 YCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALG 248
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
ITTVLT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 249 ITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 301
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 181/274 (66%), Gaps = 5/274 (1%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIW 254
G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++ G NL+L ++ +++W
Sbjct: 215 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLW 274
Query: 255 RPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPL 314
PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D Q+C L
Sbjct: 275 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 334
Query: 315 ILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP--KRNFTFKRREGEFSLLQV 371
+ SY Y + + ++W G K+++ V + + QF + RN F G + L +
Sbjct: 335 EIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFA--TGAYPRLSL 392
Query: 372 NFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRT 431
+F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITTVLT++TI+ R
Sbjct: 393 SFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRE 452
Query: 432 DLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 453 TLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 486
>gi|344299218|ref|XP_003421284.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon-like
[Loxodonta africana]
Length = 586
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 165 HDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCY 224
H + + +LN +L NY P G+ +PT++ + S+GP+S +DM+Y++D
Sbjct: 155 HRVARSPEASQILNTILSNYDHRLRPGIGE-KPTVVTVEFSVNSLGPLSTLDMEYNIDII 213
Query: 225 FRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDG 284
F Q W D RL + L L+ ++ ++W PDT+ N K++ HT+T+PN+L+RI++DG
Sbjct: 214 FCQTWYDERLRYNDSFETLVLNSNVVSQLWIPDTFFRNSKRTQEHTVTMPNQLIRIHRDG 273
Query: 285 DILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMA 343
+LY++R+TI A C + + FPMD+ SCPL S++YP+ ++ Y W K I+
Sbjct: 274 KVLYTIRMTIDAGCTLHMHRFPMDSHSCPLSFSSFSYPVSEMTYKWEDFKLEINENNSWK 333
Query: 344 ISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWI 403
+ QFDF + T G+F ++ FN+ R GY Q YVP + +LSWVSFWI
Sbjct: 334 LFQFDFKGMSNKTETLSTPAGDFMVMTFFFNVSRKFGYVAFQNYVPSSVTTMLSWVSFWI 393
Query: 404 HREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAV 463
++ + R LGIT+V+T++T+ SR + P+V Y TALD++L + F +C ++EFA +
Sbjct: 394 KKDPAAARTSLGITSVVTMTTLCTFSRKNFPRVSYVTALDFYLAICFVFCFCALMEFAVL 453
Query: 464 HYFT 467
++ T
Sbjct: 454 NFLT 457
>gi|326673420|ref|XP_003199881.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like,
partial [Danio rerio]
Length = 272
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 175/256 (68%), Gaps = 3/256 (1%)
Query: 216 DMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPN 275
D +Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+PN
Sbjct: 3 DFEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 62
Query: 276 KLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS 335
KLLRI DG +LY+MRLT+ A CPM L +FPMD SCPL GSYAY ++ Y WT S
Sbjct: 63 KLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFGSYAYTTTEVTYTWTKNAS 122
Query: 336 ISFV---PGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVL 392
S V ++Q+D + N T + GE++++ +F+LKR GYFVIQ Y+PC++
Sbjct: 123 NSVVVEEESSRLNQYDLLGQTVGNETIRSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 182
Query: 393 IVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFY 452
V+LS VSFW++RE+ R G+TTVLT++T+S+ +R LPKV YATA+DWF+ + + +
Sbjct: 183 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 242
Query: 453 CIATILEFAAVHYFTK 468
+ ++EFA V+YFTK
Sbjct: 243 VFSALIEFATVNYFTK 258
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S ++E MDY ++ + RQ W D RL+++ P +
Sbjct: 58 GYDARIRPNF-KGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDD 116
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G +LYS+RLT+ +CPM
Sbjct: 117 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGSVLYSIRLTLVLSCPMD 176
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 177 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 236
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 237 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 296
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 297 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 345
>gi|347963038|ref|XP_311123.3| AGAP000038-PA [Anopheles gambiae str. PEST]
gi|333467389|gb|EAA06524.3| AGAP000038-PA [Anopheles gambiae str. PEST]
Length = 471
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 184/318 (57%), Gaps = 27/318 (8%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
+N+T ++ +L+ Y PN G GEP + ++ I S ISE++MDY++ Y QYW+
Sbjct: 7 ENVTQTISRILEGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWK 65
Query: 231 DSRLSFM---------------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVH 269
D RL+F G + ++LS EKIW PDT+ N K S++H
Sbjct: 66 DERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLH 125
Query: 270 TITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYH 329
+T NKL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V +
Sbjct: 126 DVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMY 185
Query: 330 W--TPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVY 387
W TP I V + QF I + K G + L ++F L+R+ GYFV Q Y
Sbjct: 186 WRSTP---IRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTY 242
Query: 388 VPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLL 447
+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+
Sbjct: 243 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 302
Query: 448 MSFFYCIATILEFAAVHY 465
M F + A +LE+AAV+Y
Sbjct: 303 MCFVFVFAALLEYAAVNY 320
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 187/290 (64%), Gaps = 2/290 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P I+ ++ I S+ ISE++MDY++ YF+Q WRD RL++
Sbjct: 42 VDKLLKGYDIRLRPDFG-GPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 100
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T A
Sbjct: 101 GELKLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + +V+ W G +++ V + + QF +
Sbjct: 161 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDTAVTGVDKLELPQFSIVGIRLV 220
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 221 SREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 280
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 281 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 330
>gi|380023904|ref|XP_003695749.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like [Apis
florea]
Length = 460
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 171/273 (62%), Gaps = 5/273 (1%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIW 254
GEP ++ ++ I S ISE++MDY++ Y QYW+D RL+F L+LS EKIW
Sbjct: 29 GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIW 88
Query: 255 RPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPL 314
PDT+ N K S++H +T NKL+R++ DG + Y MR T C M L +P+D+Q+C +
Sbjct: 89 VPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTV 148
Query: 315 ILGSYAYPIEKLVYHW--TPGKSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVN 372
+ SY Y + +V +W TP + V + QF I + K G + L ++
Sbjct: 149 EIESYGYTVLDVVMYWKETPVRG---VEEAELPQFTIIGYETNDRKEKLATGIYQRLSLS 205
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F L+R+ GYFV Q Y+P +LIV+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+
Sbjct: 206 FKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSS 265
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 266 LPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 298
>gi|410989076|ref|XP_004000793.1| PREDICTED: glycine receptor subunit alpha-4 [Felis catus]
Length = 457
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 180/289 (62%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYGEYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GL ITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLDITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF K
Sbjct: 176 LKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 189/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W K+++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGEDKAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 187/290 (64%), Gaps = 2/290 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P I+ ++ I S+ ISE++MDY++ YF+Q WRD RL++
Sbjct: 17 VDKLLKGYDIRLRPDFG-GPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 75
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T A
Sbjct: 76 GELKLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 135
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + +V+ W G +++ V + + QF +
Sbjct: 136 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVDIRLV 195
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 196 SREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 255
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 256 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 305
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S ++E MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|47219233|emb|CAG11695.1| unnamed protein product [Tetraodon nigroviridis]
Length = 246
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 159/255 (62%), Gaps = 24/255 (9%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y+MD +FRQ W D RL F GPI L L+ M+ KIW PDT+ NGK+S H +T PNKL
Sbjct: 2 EYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKL 61
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSIS 337
RI Q+G ILY+MRLTI A CPM L NFPMD +CPL GSYAYPI ++VY W G S
Sbjct: 62 FRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSS 121
Query: 338 F-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
VP + S Q+D I + K GE+ ++ V+F+L+R G+F+IQ Y+PC++
Sbjct: 122 VEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMT- 180
Query: 395 VLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCI 454
ITT LT++T+S+ +R LPKV YATA+DWF+ + F +
Sbjct: 181 --------------------AITTFLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVF 220
Query: 455 ATILEFAAVHYFTKL 469
+ ++EFAAV+YF+ L
Sbjct: 221 SALIEFAAVNYFSTL 235
>gi|440908969|gb|ELR58936.1| Glycine receptor subunit alpha-3, partial [Bos grunniens mutus]
Length = 462
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|348551228|ref|XP_003461432.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon-like
[Cavia porcellus]
Length = 569
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 185/314 (58%), Gaps = 2/314 (0%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ +L NY P G PT++K + + S+GPIS +DM+Y++D F Q W D R
Sbjct: 144 TRILDTILNNYDHKLRPGIGV-RPTVVKVEVSVNSLGPISIMDMEYTIDLIFYQSWYDER 202
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L + ++L L+ M+ ++W PDT+ N K++ HTIT+PN+++RI DG +LY++R+T
Sbjct: 203 LRYNSTFDSLVLNGDMVSQLWIPDTFFRNSKKAVEHTITLPNQMVRIYNDGRVLYTIRMT 262
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQFDFISS 352
I A C + + FPMD+ SCPL S++YP +++Y W ++ + QFDF
Sbjct: 263 IDARCSLHMLKFPMDSHSCPLSFSSFSYPESEMIYKWADFNLEMNEKNTWKLLQFDFTGV 322
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
+ K G+F ++ FN+ R GY IQ YVP + +LSWVSFWI R++ R
Sbjct: 323 SNKTEIVKTPAGDFMVMTFFFNVSRRFGYIAIQNYVPSSVTTMLSWVSFWIQRDSAPART 382
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCYP 472
LGIT+VLT++T+ SR + P+V Y T LD+++ + F +C ++EFA +++ T
Sbjct: 383 SLGITSVLTMTTLGTFSRKNFPRVSYITVLDFYIAICFVFCFCALMEFAVLNFLTYNRMK 442
Query: 473 GYPSGFIERLPVIG 486
+ S + P+ G
Sbjct: 443 AHASPKLRHPPISG 456
>gi|115361507|gb|ABI95854.1| GABA-alpha subunit [Lepeophtheirus salmonis]
Length = 478
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 4/300 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +LN+ Y PN+G G P + M I S+ +SE+ MD+++D YFRQ+W+D
Sbjct: 9 NISAILNSFQMGYDKRVRPNYG-GPPVTVGVTMYILSISSVSEVMMDFTLDMYFRQFWQD 67
Query: 232 SRLSFMG--PINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
RLSF G + L + + + IW PDT+ +N K +Y H T N+ LRI G+IL S
Sbjct: 68 PRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRS 127
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFD 348
+RLTI A+CPM L+ FPMD Q C + + S+ Y + + Y W G S+ +++ QF
Sbjct: 128 IRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISSDVSLPQFK 187
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ ++ G +S L R GY++IQ+Y+P LIV++SWVSFW++R A
Sbjct: 188 VLGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGAA 247
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R+GLG+TTV T++T+ + LPK+ Y ++D +L FF A++LE+A+V Y K
Sbjct: 248 PARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGACFFIVFASLLEYASVGYMAK 307
>gi|426220599|ref|XP_004004502.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Ovis aries]
Length = 480
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 72 GYDARIRPNF-KGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 130
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 131 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 190
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 191 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 250
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 358
>gi|345307468|ref|XP_001505679.2| PREDICTED: glycine receptor subunit alpha-3-like [Ornithorhynchus
anatinus]
Length = 447
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 174/276 (63%), Gaps = 2/276 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PINNLSLSIKMLEKI 253
G P + N+ I S G I+E MDY ++ + RQ W D RL++ P ++L L ML+ I
Sbjct: 55 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSI 114
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM L+NFPMD Q+C
Sbjct: 115 WKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCI 174
Query: 314 LILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR-REGEFSLLQVN 372
+ L S+ Y + L++ W + G+ + QF + K G+F+ ++V
Sbjct: 175 MQLESFGYTMNDLIFEWQEEAPVQVADGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVR 234
Query: 373 FNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTD 432
F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVLT++T S SR
Sbjct: 235 FHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 294
Query: 433 LPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 LPKVSYVKAIDIWMAVCLVFVFSALLEYAAVNFVSR 330
>gi|194669246|ref|XP_614803.4| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
gi|297477618|ref|XP_002689498.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|296484973|tpg|DAA27088.1| TPA: glycine receptor, alpha 3-like [Bos taurus]
Length = 447
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|296486582|tpg|DAA28695.1| TPA: gamma-aminobutyric acid receptor subunit alpha-2 precursor
[Bos taurus]
Length = 285
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/260 (44%), Positives = 167/260 (64%), Gaps = 7/260 (2%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
++N +++ K+++ I T +L+ LL Y + P G T + TN+ + S GP+S+
Sbjct: 27 LANIQEDEAKNNITI---FTRILDRLLDGYDNRLRPGLGDS-ITEVFTNIYVTSFGPVSD 82
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
DM+Y++D +FRQ W+D RL F GP+N L L+ M KIW PDT+ NGK+S H +T+P
Sbjct: 83 TDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 142
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--P 332
NKLLRI DG +LY+MRLT++A CPM L +FPMD SCPL GSYAY ++ Y WT
Sbjct: 143 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 202
Query: 333 GKSISFVP-GMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S+ P G ++Q+D + T K GE++++ +F+LKR GYFVIQ Y+PC+
Sbjct: 203 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 262
Query: 392 LIVVLSWVSFWIHREATSDR 411
+ V+LS VSFW++RE+ R
Sbjct: 263 MTVILSQVSFWLNRESVPAR 282
>gi|74187931|dbj|BAE37103.1| unnamed protein product [Mus musculus]
Length = 307
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 165/254 (64%), Gaps = 4/254 (1%)
Query: 161 EKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYS 220
+ K + + +N T +L++LL Y + P G G T +KT++ + S GP+S+++M+Y+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFG-GPVTEVKTDIYVTSFGPVSDVEMEYT 94
Query: 221 MDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRI 280
MD +FRQ W D RL + GPI L L+ M+ K+W PDT+ NGK+S H +T PNKL RI
Sbjct: 95 MDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRI 154
Query: 281 NQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-V 339
++G ILY+MRLTI A CPM L +FPMD +CPL GSYAYP +++Y WT G S V
Sbjct: 155 MRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEV 214
Query: 340 PGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLS 397
P + S Q+D I + T K GE+ ++ V F+L+R GYF+IQ Y+PC++ V+LS
Sbjct: 215 PKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILS 274
Query: 398 WVSFWIHREATSDR 411
VSFWI++E+ R
Sbjct: 275 QVSFWINKESVPAR 288
>gi|358413362|ref|XP_003582551.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|359067890|ref|XP_003586404.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
Length = 462
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 3/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG + N+ I S G I+E MDY ++ + RQ W D RL++ P +
Sbjct: 56 GYDARIRPNF-KGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDD 114
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 115 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMD 174
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTFKR 361
L+NFPMD Q+C + L S+ Y + L++ W + G+ + QF + K
Sbjct: 175 LKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKH 234
Query: 362 -REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVL 420
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 421 TLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
T++T S SR LPKV Y A+D ++ + + + +LE+AAV++ ++
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
>gi|345807334|ref|XP_549340.3| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Canis
lupus familiaris]
Length = 488
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 159 LKEKKKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEID 216
L E+ K + +G T +LN++L NY P G+ PT++ + + ++GPIS +D
Sbjct: 50 LSEETKSTMRLGNLPAATHILNSILNNYDHKLRPGIGE-RPTVVTVELSVNTLGPISIMD 108
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
M+Y++D F Q W D RL + G + L+ M+ ++W PDT N K++ H IT+PN+
Sbjct: 109 MEYTIDITFCQTWYDERLRYNGSFESFVLNGNMVSQLWIPDTVFRNSKRTQEHVITMPNQ 168
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-S 335
++RI++DG +LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K
Sbjct: 169 MVRIHKDGKVLYTIRMTIDAGCLLYMLKFPMDSHSCPLSFSSFSYPESEMIYKWENFKLQ 228
Query: 336 ISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
I + QFDF T G+F+++ + FN+ R G+ Q YVP + +
Sbjct: 229 IDERNTWKLFQFDFTGVTNTTETISTPAGDFTVMTLYFNVSRRFGFVAFQNYVPSSVTTM 288
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LSWVSFWI R++ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C
Sbjct: 289 LSWVSFWIKRDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFC 348
Query: 456 TILEFAAVHYFT 467
++EFA +++ T
Sbjct: 349 ALMEFAVLNFLT 360
>gi|321474710|gb|EFX85675.1| hypothetical protein DAPPUDRAFT_20229 [Daphnia pulex]
Length = 319
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 188/300 (62%), Gaps = 4/300 (1%)
Query: 172 NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRD 231
NI+ +LN L Y PN+G G P I+ +M I ++ +SE+ MD+++D YFRQ+W D
Sbjct: 1 NISGILNGLQVGYDKRVRPNYG-GIPVQIQVSMGIITISSLSEVTMDFTLDVYFRQFWTD 59
Query: 232 SRLSFMGP--INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
RLSF + LS+S + L +W PDT+ N K +Y+HT+T N+ +RI DG+I S
Sbjct: 60 DRLSFQRQRGVEILSVSTEYLRNMWVPDTFFPNEKTAYLHTVTTSNEFVRIRHDGEITRS 119
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFD 348
MR+TI A+CPM+L+ FP+D+Q CP+ + S+ + ++ Y W K++S P + + QF
Sbjct: 120 MRITITASCPMNLKYFPLDSQLCPIEIESFGFTTNEIWYKWVDSPKAVSIFPEVELPQFQ 179
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ KR +++ G +S L + R GY++IQ+Y+P LIVV+SWVSFWI+R A+
Sbjct: 180 VMGYRKREYSYSLTTGNYSRLACDIQFVRSMGYYLIQIYIPSSLIVVISWVSFWINRNAS 239
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
R+ LG+TTVLT++T+ + LPK+ Y ++D +L F A++LE+AAV Y K
Sbjct: 240 PARVSLGVTTVLTMTTLMSSTNAQLPKISYVKSIDIYLGTCFVMVFASLLEYAAVGYIAK 299
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 190/307 (61%), Gaps = 2/307 (0%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P I+ ++ I S+ ISE++MDY++ YF+Q W D RL++
Sbjct: 8 VDKLLKGYDIRLRPDFG-GPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAY 66
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T A
Sbjct: 67 GELDLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSPKR 355
C M LR +P+D Q+C L + SY Y + +V+ W G S ++ V + + QF +
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNSAVTGVDKLELPQFSIVELRLV 186
Query: 356 NFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLG 415
+ + G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LG
Sbjct: 187 SREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 246
Query: 416 ITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCYPGYP 475
+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y P
Sbjct: 247 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQ 306
Query: 476 SGFIERL 482
ERL
Sbjct: 307 KKLSERL 313
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 181/287 (63%), Gaps = 2/287 (0%)
Query: 180 LLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGP 239
LL+ Y + PN GK E +I +M + S+ +SE+D+DY++ RQ+W+D RL++ G
Sbjct: 50 LLEGYDRNFRPNFGK-EALVINMSMTVASIDSVSEVDLDYTITILLRQFWKDQRLAYRGM 108
Query: 240 INNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
+LSL +++E +W PDT++LN K++++H +TV N+L+R+ DG+++Y MR+T C
Sbjct: 109 NRSLSLDGRLVEALWVPDTFLLNSKEAFLHRVTVDNRLIRLFPDGELIYGMRITSVLACK 168
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKRNFT 358
M LR +P+D Q+C L L SY Y E L++ W G KSI + + +SQF
Sbjct: 169 MDLRKYPLDEQTCTLELESYGYTKEDLIFTWKNGNKSIHNLDKIDLSQFSLGDHNTMTAE 228
Query: 359 FKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITT 418
G + L ++F L R+ +F++Q YVP +L+V+ SWVSFWI+ EA R+ LGITT
Sbjct: 229 SVYETGTYPRLVLSFKLHRNVFFFLLQTYVPSILLVISSWVSFWINHEAVPARVALGITT 288
Query: 419 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
VLT++T +R LP++ Y A+D +L+M F + A +LE+A V++
Sbjct: 289 VLTMTTFITSARASLPRISYIKAVDVYLVMCFVFVFAALLEYAFVNF 335
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 190/298 (63%), Gaps = 16/298 (5%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G+P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 36 IVDRLLKGYDVRLRPDFG-GDPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 94
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 95 YSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 154
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKR 355
A C M LR +P+D Q+C L + SY Y ++ +V++W S A++ D + P+
Sbjct: 155 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDS-------AVTGMDTLELPQF 207
Query: 356 NFTFKR---RE-----GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+R RE G + L ++F +KR+ GYF++Q Y+P VLI +LSWVSFWI+ +A
Sbjct: 208 TIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDA 267
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 268 SAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAYVNY 325
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 189/298 (63%), Gaps = 16/298 (5%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 14 IVDRLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 72
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 73 YSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 132
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKR 355
A C M LR +P+D Q+C L + SY Y ++ +V++W S A++ D + P+
Sbjct: 133 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDS-------AVTGMDTLELPQF 185
Query: 356 NFTFKR---RE-----GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+R RE G + L ++F +KR+ GYF++Q Y+P VLI +LSWVSFWI+ +A
Sbjct: 186 TIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDA 245
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 246 SAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 303
>gi|444518647|gb|ELV12283.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Tupaia chinensis]
Length = 413
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 177/319 (55%), Gaps = 55/319 (17%)
Query: 154 KVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPIS 213
++ N L + + D KNI+ +L+NLL+ Y + P G G T +KT++ + S GP+S
Sbjct: 24 RLENALGKLEDEDNFYSKNISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVS 82
Query: 214 EIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITV 273
+++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T
Sbjct: 83 DVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTT 142
Query: 274 PNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG 333
PNKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 143 PNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKG 202
Query: 334 KSISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
S VP + S Q+D + + T K G
Sbjct: 203 PLYSVEVPEESSSLLQYDLVGQTVSSETIKSNTG-------------------------- 236
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
ITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 237 -------------------------ITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCF 271
Query: 451 FYCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 272 AFVFSALIEFAAVNYFTNL 290
>gi|74008431|ref|XP_549155.2| PREDICTED: glycine receptor subunit alpha-4 [Canis lupus
familiaris]
Length = 457
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 179/288 (62%), Gaps = 4/288 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+ LGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
LT++T S SR LPKV Y A+D ++ + + + +LE+AAV++ +
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVS 343
>gi|3980057|emb|CAA39970.1| GABA-A receptor beta-4 subunit [Gallus gallus]
Length = 374
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 12 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 70
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 71 YNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 130
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAI---SQFDFISS 352
A C M LR +P+D Q+C L + SY Y ++ +V+ W S V GM + QF I
Sbjct: 131 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSA--VTGMEVLELPQFTIIEQ 188
Query: 353 P--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++
Sbjct: 189 RLVSREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 246
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 247 RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 301
>gi|291408013|ref|XP_002720405.1| PREDICTED: glycine receptor, alpha 4 subunit-like [Oryctolagus
cuniculus]
Length = 457
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S G ++E MDY ++ + RQ W D RL++ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +CPM
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L Y + LV+ W ++ G+ + QF + K
Sbjct: 176 LKNFPMDIQTCTMQLERVGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 YYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AAV++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSR 344
>gi|449275751|gb|EMC84519.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Columba
livia]
Length = 422
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 180/275 (65%), Gaps = 4/275 (1%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIW 254
G P + N+ I S+ +SE++MDY++ YF+QYWRD RL++ G NL+L ++ +++W
Sbjct: 1 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLW 60
Query: 255 RPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPL 314
PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D Q+C L
Sbjct: 61 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 120
Query: 315 ILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSP--KRNFTFKR-REGEFSLLQ 370
+ SY Y + + ++W G +++ V + + QF + +N F + + L
Sbjct: 121 EIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEYRLVSKNVVFATGKYCAYPRLS 180
Query: 371 VNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSR 430
++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++ R+ LGITTVLT++TI+ R
Sbjct: 181 LSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLR 240
Query: 431 TDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 241 ETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 275
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 186/292 (63%), Gaps = 6/292 (2%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ L+K Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q WRD RLS+
Sbjct: 39 VDRLMKGYDIRLRPDFG-GAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSY 97
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 98 SEIPLNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSP-- 353
C M LR +P+D Q+C L + SY Y + + ++W G ++S V + + QF +
Sbjct: 158 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLI 217
Query: 354 KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIG 413
+N F G + L ++F LKR+ GYF++Q Y+P + I +LSWVSFWI+ +A++ R+
Sbjct: 218 SKNVVFS--TGSYPRLSLSFKLKRNIGYFILQTYMPSIPITILSWVSFWINYDASAARVA 275
Query: 414 LGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 LGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNY 327
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 191/301 (63%), Gaps = 9/301 (2%)
Query: 171 KNITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQ 227
KNI+ V ++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q
Sbjct: 139 KNISEVKEIVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQ 197
Query: 228 YWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDIL 287
WRD RL++ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +L
Sbjct: 198 SWRDKRLAYNDIALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVL 257
Query: 288 YSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQ 346
Y +R+T A C M LR +P+D Q+C L + SY Y I+ +V+ W S ++ + + + Q
Sbjct: 258 YGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIVFFWQGNDSAVTGIEVLELPQ 317
Query: 347 FDFISSP--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
F I R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+
Sbjct: 318 FTIIEQRLVTREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWIN 375
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
+A++ R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+
Sbjct: 376 YDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVN 435
Query: 465 Y 465
Y
Sbjct: 436 Y 436
>gi|62917|emb|CAA39969.1| GABA-A receptor,beta-4 subunit [Gallus gallus]
Length = 405
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 39 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 97
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 98 YNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 157
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAI---SQFDFISS 352
A C M LR +P+D Q+C L + SY Y ++ +V+ W S V GM + QF I
Sbjct: 158 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSA--VTGMEVLELPQFTIIEQ 215
Query: 353 P--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++
Sbjct: 216 RLVSREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 273
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 274 RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 328
>gi|291410181|ref|XP_002721372.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, epsilon
[Oryctolagus cuniculus]
Length = 517
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 189/330 (57%), Gaps = 14/330 (4%)
Query: 160 KEKKKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDM 217
+E K GK T +LN +L NY P GK +PT++ + + S+GP+S +DM
Sbjct: 63 EETKPAAAGTGKLPEATRILNTILSNYDHKLRPGIGK-KPTVVTVEISVNSLGPLSILDM 121
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y++D F Q W D RL + L L+ ++ ++W PDT N K++ H IT+PN++
Sbjct: 122 EYTIDIIFYQTWYDERLRYNDTFETLVLNGNVVSQLWIPDTIFRNSKRTQEHEITMPNQM 181
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SI 336
+RI++DG +LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I
Sbjct: 182 VRIHKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWDDFKLEI 241
Query: 337 SFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVL 396
+ + QFDF + G+F ++ FN+ R GY Q YVP + +L
Sbjct: 242 NEKNSWKLFQFDFTGVSNKTEIISTPAGDFMVMTFFFNVSRRFGYVAFQNYVPSSVTTML 301
Query: 397 SWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
SWVSFWI +E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C
Sbjct: 302 SWVSFWIKKESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCA 361
Query: 457 ILEFAAVHYFT----------KLCYPGYPS 476
+LEFA +++ T KL YP + S
Sbjct: 362 LLEFAVLNFLTYNQMKAHASPKLRYPRFAS 391
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 187/293 (63%), Gaps = 6/293 (2%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 54 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 112
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 113 YSDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 172
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKS-ISFVPGMAISQFDFISSP- 353
A C M LR +P+D Q+C L + SY Y ++ +V+ W S ++ + + + QF I
Sbjct: 173 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNNSAVTGMKDLELPQFTIIEQRL 232
Query: 354 -KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
R F G + L ++F +KR+ GYF++Q Y+P VLI +LSWVSFWI+ +A++ R+
Sbjct: 233 VTREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASAARV 290
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 291 ALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 343
>gi|390464138|ref|XP_002749099.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Callithrix jacchus]
Length = 455
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 175/304 (57%), Gaps = 12/304 (3%)
Query: 182 KNYQSSEPPNHGKGEP-TIIKTNMLIR-------SMGPISEIDMD---YSMDCYFRQYWR 230
++ QS++ G+G T+ +N L+ + P++ + Y +D +F Q W
Sbjct: 34 RHGQSTDRTGSGEGRAGTVCYSNGLVDQRMEAAVGLPPVTACTCEHREYQIDIFFAQTWT 93
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
DSRL F + L+L+ M+ IW PDT N K + H IT PN+LLRI DG ILY++
Sbjct: 94 DSRLRFNSTMKILTLNSNMVGLIWLPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 153
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDF 349
RLTI A C + L NFPMD SCPLI SY YP E+++Y W + + QFDF
Sbjct: 154 RLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDF 213
Query: 350 ISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATS 409
+ G++ ++ + F L R GYF IQ Y+PC+L VVLSWVSFWI ++AT
Sbjct: 214 MGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATP 273
Query: 410 DRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A ++E+A ++Y++
Sbjct: 274 ARTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSC 333
Query: 470 CYPG 473
P
Sbjct: 334 RKPA 337
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|262527817|gb|ACY69094.1| gamma-aminobutyric acid A receptor beta 2 isoform 4 [Homo sapiens]
Length = 372
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|443694842|gb|ELT95877.1| hypothetical protein CAPTEDRAFT_48879, partial [Capitella teleta]
Length = 196
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 145/197 (73%), Gaps = 5/197 (2%)
Query: 219 YSMDCYFRQYWRDSRLSFM--GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
Y +DCYFRQ W D+RL F P+ L++S+ +LEKIW+PDT NG++S++HT+T PNK
Sbjct: 1 YQLDCYFRQSWVDTRLMFRNDSPLRTLNVSVYVLEKIWKPDTSFFNGRRSHLHTVTTPNK 60
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-- 334
LLRIN+DG ILYSMRLTIKA+CPM L+NFPMDTQSCPL GS+ Y + Y WT G+
Sbjct: 61 LLRINRDGRILYSMRLTIKASCPMHLQNFPMDTQSCPLKFGSHGYTSSDVQYVWTNGRND 120
Query: 335 SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIV 394
SI M +SQFD + SP N T + + G ++L NF L+RH GYF+I +YVPC L+V
Sbjct: 121 SIKLASDMQMSQFDILGSPVHNET-EFKFGACTVLVANFVLRRHMGYFLINLYVPCSLLV 179
Query: 395 VLSWVSFWIHREATSDR 411
++SWV FWI+REAT+DR
Sbjct: 180 IISWVGFWINREATADR 196
>gi|395855550|ref|XP_003800218.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Otolemur garnettii]
Length = 380
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 158/257 (61%), Gaps = 1/257 (0%)
Query: 217 MDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNK 276
++Y +D +F Q W DSRL F + L+L+ M+ IW PDT N K + H IT PN+
Sbjct: 3 LEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQ 62
Query: 277 LLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-S 335
LLRI DG ILY++RLTI A C + L NFPMD SCPL+ SY YP E+++Y W
Sbjct: 63 LLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLVFSSYGYPKEEMIYRWRKNSVE 122
Query: 336 ISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVV 395
+ + QFDF+ G++ ++ + F L R GYF IQ Y+PC+L VV
Sbjct: 123 AADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVV 182
Query: 396 LSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIA 455
LSWVSFWI ++AT R LGITTVLT++T+S +RT LP+V Y TA+D F+ + F + A
Sbjct: 183 LSWVSFWIKKDATPARTALGITTVLTMTTLSTIARTSLPRVSYVTAMDLFVTVCFLFVFA 242
Query: 456 TILEFAAVHYFTKLCYP 472
++E+A ++Y++ P
Sbjct: 243 ALMEYATLNYYSSCRKP 259
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|269914159|ref|NP_001161733.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Monodelphis domestica]
gi|395505008|ref|XP_003756838.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Sarcophilus harrisii]
Length = 512
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|345799422|ref|XP_003434557.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Canis
lupus familiaris]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|350594447|ref|XP_003483903.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Sus
scrofa]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|291387759|ref|XP_002710399.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDKLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|281349063|gb|EFB24647.1| hypothetical protein PANDA_021416 [Ailuropoda melanoleuca]
Length = 486
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 191/317 (60%), Gaps = 9/317 (2%)
Query: 159 LKEKKKHDLM-----IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP 211
L E+ K L+ +GK T +LN++L NY P G+ +PT++ + + ++GP
Sbjct: 43 LSEETKPTLIGPHPRLGKLPAATHILNSILSNYDHKLRPGIGE-KPTVVTVELSVNTLGP 101
Query: 212 ISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
IS +DM+Y++D F Q W D RL + G + L+ M+ ++W PDT+ N K++ H I
Sbjct: 102 ISILDMEYTIDITFCQTWYDERLRYNGSFESFVLNGNMVSELWIPDTFFRNSKRTQEHVI 161
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
T+PN+++RI++DG +LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W
Sbjct: 162 TMPNQMVRIHKDGKVLYTIRMTIDAGCLLHMLKFPMDSHSCPLSFSSFSYPESEMIYQWE 221
Query: 332 PGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
K I+ + QFDF T G+F ++ + FN+ R G+ Q YVP
Sbjct: 222 DFKLEINEKNSWKLFQFDFTGVTNSTETISTPAGDFMVVTLFFNVSRRFGFVAFQNYVPS 281
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
+ +LSWVSFWI +++ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F
Sbjct: 282 SVTTMLSWVSFWIRKDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICF 341
Query: 451 FYCIATILEFAAVHYFT 467
+C ++EFA +++ T
Sbjct: 342 VFCFCALMEFAVLNFLT 358
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|348575237|ref|XP_003473396.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Cavia porcellus]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|296192665|ref|XP_002744170.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Callithrix jacchus]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 180/281 (64%), Gaps = 9/281 (3%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKM 249
P G P + + + S+ +SE++MDY++ YF+Q W+D RLS+ G NL+L ++
Sbjct: 3 PTSLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRV 62
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
+++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D
Sbjct: 63 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE 122
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS----SPKRNFTFKRREG 364
Q+C L + SY Y + + ++W G+ +++ V + + QF + S K FT G
Sbjct: 123 QNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFT----TG 178
Query: 365 EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLST 424
+ L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+ LGITTVLT++T
Sbjct: 179 AYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTT 238
Query: 425 ISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
IS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 239 ISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 279
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 39 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 97
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 98 YNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 157
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAI---SQFDFISS 352
A C M LR +P+D Q+C L + SY Y ++ +V+ W S V GM + QF I
Sbjct: 158 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSA--VTGMEVLELPQFTIIEQ 215
Query: 353 P--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++
Sbjct: 216 RLVSREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 273
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 274 RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 328
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 39 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 97
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 98 YNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 157
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAI---SQFDFISS 352
A C M LR +P+D Q+C L + SY Y ++ +V+ W S V GM + QF I
Sbjct: 158 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSA--VTGMEVLELPQFTIIEQ 215
Query: 353 P--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++
Sbjct: 216 RLVSREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 273
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 274 RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 328
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|292495011|sp|P63137.2|GBRB2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|262527825|gb|ACY69098.1| gamma-aminobutyric acid A receptor beta 2 long isoform [Mus
musculus]
Length = 512
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 188/298 (63%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 328
>gi|90075124|dbj|BAE87242.1| unnamed protein product [Macaca fascicularis]
Length = 327
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 175/263 (66%), Gaps = 4/263 (1%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +L+ LL Y + P G+ T +KT++ + S GP+S+ DM+Y++D +FRQ W++ R
Sbjct: 43 TRILDRLLDGYDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKNER 101
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L F GP+ L L+ M KIW PDT+ NGK+S H +T+PNKLLRI +DG +LY+MRLT
Sbjct: 102 LKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT--PGKSISFVP-GMAISQFDFI 350
++A CPM L +FPMD +CPL GSYAY ++VY WT P +S+ G ++Q+D +
Sbjct: 162 VRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLL 221
Query: 351 SSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
+ + GE+ ++ +F+LKR GYFVIQ Y+PC++ V+LS VSFW++RE+
Sbjct: 222 GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPA 281
Query: 411 RIGLGITTVLTLSTISLDSRTDL 433
R G+TTVLT++T+S+ +R L
Sbjct: 282 RTVFGVTTVLTMTTLSISARNSL 304
>gi|321478374|gb|EFX89331.1| hypothetical protein DAPPUDRAFT_310319 [Daphnia pulex]
Length = 540
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 177/297 (59%), Gaps = 4/297 (1%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
KN+T VL LL +Y P+ G G+P + ++ + S ISE++MDY++ QYWR
Sbjct: 30 KNVTNVLGQLLDDYDIRLRPDFG-GDPLYVGMDITVASFDAISEVNMDYTLTLCLNQYWR 88
Query: 231 DSRLSFMGPINN--LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
D RL+F + L+LS KIW PDT+ N K S++H +T N L+R++ DG I Y
Sbjct: 89 DERLAFTHEKEDVVLTLSGDFSNKIWVPDTFFANDKNSFLHDVTERNTLMRLHGDGSIEY 148
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFD 348
+R T C M L +P+D Q+C + + SY Y + +V W + V + QF
Sbjct: 149 GLRFTTTLACMMDLHYYPLDHQNCTVEIESYGYTVSDVVMFWRETPVVG-VEDAELPQFT 207
Query: 349 FISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREAT 408
+ + K G + L ++F L+R+ GYF+ Q Y+P +LIV+LSWVSFWI+ EAT
Sbjct: 208 IVGYETNDRMEKLATGAYQRLSLSFRLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEAT 267
Query: 409 SDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
S R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F + A +LE+AAV+Y
Sbjct: 268 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVMCFVFVFAALLEYAAVNY 324
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 10/295 (3%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+++ LLK Y P+ G G P + ++ I S+ ISE++MDY++ YF+Q WRD RL+
Sbjct: 53 IVDKLLKGYDVRLRPDFG-GNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLA 111
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ NL+L ++ +++W PDTY LN K+S++H +TV N+++R++ DG +LY +R+T
Sbjct: 112 YNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTT 171
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAI---SQFDFISS 352
A C M LR +P+D Q+C L + SY Y ++ +V+ W S V GM + QF I
Sbjct: 172 AACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSA--VTGMEVLELPQFTIIEQ 229
Query: 353 P--KRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSD 410
R F G + L ++F +KR+ GYF++Q Y+P +LI +LSWVSFWI+ +A++
Sbjct: 230 RLVSREVVFT--TGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 287
Query: 411 RIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R+ LG+TTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 288 RVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 342
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 187/301 (62%), Gaps = 16/301 (5%)
Query: 177 LNNLLKNYQSSEPPNHGKGE-------PTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYW 229
++ LLK Y P+ G P + + + S+ +SE++MDY++ YF+Q W
Sbjct: 41 VDRLLKGYDIRLRPDFGGNASCFFNLPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSW 100
Query: 230 RDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYS 289
+D RLS+ G NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 101 KDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYG 160
Query: 290 MRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFD 348
+R+T A C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF
Sbjct: 161 LRITTTAACMMDLRRYPLDEQNCTLKINSYGYTTDDIEFYWNGGEGAVTGVNKIELPQFS 220
Query: 349 FIS----SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIH 404
+ S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+
Sbjct: 221 IVDYKMVSKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWIN 276
Query: 405 REATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVH 464
+A++ R+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+
Sbjct: 277 YDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVN 336
Query: 465 Y 465
Y
Sbjct: 337 Y 337
>gi|18490267|gb|AAH22449.1| Gamma-aminobutyric acid (GABA) A receptor, beta 1 [Homo sapiens]
gi|123983084|gb|ABM83283.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123993389|gb|ABM84296.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123997777|gb|ABM86490.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000361|gb|ABM87689.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000363|gb|ABM87690.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
Length = 474
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 187/294 (63%), Gaps = 10/294 (3%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ LLK Y P+ G G P + + + S+ +SE++MDY++ YF+Q W+D RLS+
Sbjct: 41 VDRLLKGYDIRLRPDFG-GPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSY 99
Query: 237 MGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
G NL+L ++ +++ PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A
Sbjct: 100 SGIPLNLTLDNRVADQLCVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS---- 351
C M LR +P+D Q+C L + SY Y + + ++W G+ +++ V + + QF +
Sbjct: 160 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMV 219
Query: 352 SPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
S K FT G + L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R
Sbjct: 220 SKKVEFT----TGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAAR 275
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
+ LGITTVLT++TIS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 276 VALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 329
>gi|301791722|ref|XP_002930829.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon-like,
partial [Ailuropoda melanoleuca]
Length = 579
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 191/317 (60%), Gaps = 9/317 (2%)
Query: 159 LKEKKKHDLM-----IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGP 211
L E+ K L+ +GK T +LN++L NY P G+ +PT++ + + ++GP
Sbjct: 136 LSEETKPTLIGPHPRLGKLPAATHILNSILSNYDHKLRPGIGE-KPTVVTVELSVNTLGP 194
Query: 212 ISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTI 271
IS +DM+Y++D F Q W D RL + G + L+ M+ ++W PDT+ N K++ H I
Sbjct: 195 ISILDMEYTIDITFCQTWYDERLRYNGSFESFVLNGNMVSELWIPDTFFRNSKRTQEHVI 254
Query: 272 TVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWT 331
T+PN+++RI++DG +LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W
Sbjct: 255 TMPNQMVRIHKDGKVLYTIRMTIDAGCLLHMLKFPMDSHSCPLSFSSFSYPESEMIYQWE 314
Query: 332 PGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPC 390
K I+ + QFDF T G+F ++ + FN+ R G+ Q YVP
Sbjct: 315 DFKLEINEKNSWKLFQFDFTGVTNSTETISTPAGDFMVVTLFFNVSRRFGFVAFQNYVPS 374
Query: 391 VLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSF 450
+ +LSWVSFWI +++ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F
Sbjct: 375 SVTTMLSWVSFWIRKDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICF 434
Query: 451 FYCIATILEFAAVHYFT 467
+C ++EFA +++ T
Sbjct: 435 VFCFCALMEFAVLNFLT 451
>gi|297292527|ref|XP_002804095.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Macaca mulatta]
Length = 422
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 180/281 (64%), Gaps = 9/281 (3%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKM 249
P G P + + + S+ +SE++MDY++ YF+Q W+D RLS+ G NL+L ++
Sbjct: 3 PTSLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRV 62
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
+++W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D
Sbjct: 63 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE 122
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS----SPKRNFTFKRREG 364
Q+C L + SY Y + + ++W G+ +++ V + + QF + S K FT G
Sbjct: 123 QNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFT----TG 178
Query: 365 EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLST 424
+ L ++F LKR+ GYF++Q Y+P LI +LSWVSFWI+ +A++ R+ LGITTVLT++T
Sbjct: 179 AYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTT 238
Query: 425 ISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
IS R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 239 ISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 279
>gi|37590793|gb|AAH59376.1| GABRE protein [Homo sapiens]
gi|71052075|gb|AAH47108.1| GABRE protein [Homo sapiens]
gi|71052187|gb|AAH26337.1| GABRE protein [Homo sapiens]
gi|312153054|gb|ADQ33039.1| gamma-aminobutyric acid (GABA) A receptor, epsilon [synthetic
construct]
Length = 365
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 178/291 (61%), Gaps = 2/291 (0%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F Q W D RL
Sbjct: 74 ILNTILSNYDHKLRPGIGE-KPTVVTVEIAVNSLGPLSILDMEYTIDIIFSQTWYDERLC 132
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +LY++R+TI
Sbjct: 133 YNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKVLYTIRMTID 192
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPK 354
A C + + FPMD+ SCPL S++YP +++Y W K I+ + QFDF
Sbjct: 193 AGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLFQFDFTGVSN 252
Query: 355 RNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGL 414
+ G+F ++ + FN+ R GY Q YVP + +LSWVSFWI E+ R L
Sbjct: 253 KTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSL 312
Query: 415 GITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
GIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 313 GITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNF 363
>gi|449275793|gb|EMC84561.1| Gamma-aminobutyric acid receptor subunit rho-3, partial [Columba
livia]
Length = 425
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 181/284 (63%), Gaps = 6/284 (2%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIK 248
P G G P + ++ + S+ ISE+DMD++M Y R YW+D RLSF N +++ +
Sbjct: 33 PGFG-GSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSNKNKSMTFDGR 91
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H TV N +LR+ DG++L+S+R+T+ A C M FP+D
Sbjct: 92 LIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAMCFMDFSRFPLD 151
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGE 365
TQ+C L L SYAY + L+ +W G KS+S +++SQF FI S F G
Sbjct: 152 TQNCSLELESYAYNEDDLMLYWKHGNKSLSTDEHISLSQF-FIEEFSASSGLAFYSSTGW 210
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 211 YNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 270
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + +++E+AAV+Y T +
Sbjct: 271 MTGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTI 314
>gi|194035313|ref|XP_001927040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Sus
scrofa]
Length = 462
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 207/345 (60%), Gaps = 23/345 (6%)
Query: 139 IMDDETKTHWTNR-LPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNH----- 192
++ E++ HW R +P++S KK ++ ++ + + L K+ Q +H
Sbjct: 19 VLATESRVHWQKREVPEMS------KKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMR 72
Query: 193 -GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--K 248
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF NNLS++ +
Sbjct: 73 PGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS-TNNLSMTFDGR 131
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+D
Sbjct: 132 LVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLD 191
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREG 364
TQ+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 192 TQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTG 249
Query: 365 EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLST 424
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+ST
Sbjct: 250 WYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMST 309
Query: 425 ISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
I +P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 310 IITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV 354
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 187/298 (62%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDKLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F L+R+ GYF++Q Y+P +LI +LSWVSFWI +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNY 328
>gi|410989567|ref|XP_004001030.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Felis
catus]
Length = 493
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 182/295 (61%), Gaps = 2/295 (0%)
Query: 174 TLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSR 233
T +LN++L NY P G+ +PT++ + + ++GPIS +DM+Y++D F Q W D R
Sbjct: 72 THILNSILNNYDHKLRPGIGE-KPTVVTVELSVNTLGPISILDMEYTIDITFCQTWYDER 130
Query: 234 LSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLT 293
L + G + L+ M+ ++W PDT+ N K++ H IT+PN+++RI++DG +LY++R+T
Sbjct: 131 LRYNGSFESFVLNGNMVSQLWIPDTFFRNSKRTQEHVITMPNQMVRIHKDGKVLYTIRMT 190
Query: 294 IKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISS 352
I A C + + FPMD+ SCPL S++YP +++Y W K I+ + QFDF
Sbjct: 191 IDAGCLLHMLKFPMDSHSCPLSFSSFSYPESEMIYKWEDFKLEINEKNSWKLFQFDFTGV 250
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
T G+F ++ + FN+ R G+ Q YVP + +LSWVSFWI +++ R
Sbjct: 251 TNITETISTPTGDFMVMTLFFNVSRRFGFIAFQNYVPSSVTTMLSWVSFWIKKDSAPART 310
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C ++EFA +++ T
Sbjct: 311 SLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLNFLT 365
>gi|395849939|ref|XP_003797564.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Otolemur garnettii]
Length = 462
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 211/361 (58%), Gaps = 22/361 (6%)
Query: 139 IMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNH------ 192
++D E++ HW R H + KK ++ ++ + + L+K+ Q +H
Sbjct: 19 VLDTESRVHWPGR----EVH-EMSKKGSPILKRSPDITKSPLMKSEQLLRIDDHDFSMRP 73
Query: 193 GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--KM 249
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RL+F NNLS++ ++
Sbjct: 74 GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPS-TNNLSMTFDGRL 132
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+DT
Sbjct: 133 VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDT 192
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREGE 365
Q+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 193 QTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTGW 250
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 251 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 310
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCYPGYPSGFIERLPVI 485
+P+V Y A+D +L +SF + ++LE+AAV+Y T + E+LP
Sbjct: 311 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV-QERKEQKLREKLPCA 369
Query: 486 G 486
G
Sbjct: 370 G 370
>gi|83779000|gb|ABC47324.1| GABA receptor [Tetranychus urticae]
Length = 585
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 171/277 (61%), Gaps = 4/277 (1%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG--PINNLSLSIKMLEK 252
G P + M I ++ +SE+ MD++ D YFRQ WRDSRLSF I+ + + ++ +K
Sbjct: 67 GPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKARHGISQILVDAEVADK 126
Query: 253 IWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSC 312
IW PDT+ N KQ+Y H T N LRI+ DG +L S+RLT+ A+CPM+L+ FPMD Q C
Sbjct: 127 IWVPDTFFANEKQAYFHEATTKNTFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKC 186
Query: 313 PLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISSPKRNFTF-KRREGEFSLLQV 371
+ + SY Y + ++Y+W ++ + + QF I+S ++++ + G +S L
Sbjct: 187 NIEIESYGYSMTDIIYNWVDENAVKIDSNLMLPQFS-IASIRQSWKYISLTTGNYSRLMC 245
Query: 372 NFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRT 431
L R GY++IQ+YVP LIV++SWVSFW+HR AT R+ LG+ TVLT++T+ + +
Sbjct: 246 EIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMTTLMSSTNS 305
Query: 432 DLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LPK+ Y ++D FL F A +LE+AAV Y K
Sbjct: 306 QLPKISYVKSIDVFLGTCFVMVFAALLEYAAVGYIGK 342
>gi|344265224|ref|XP_003404685.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Loxodonta africana]
Length = 516
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 187/298 (62%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 32 NMSLVKETVDKLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 90
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 91 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 151 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 210
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F L+R+ GYF++Q Y+P +LI +LSWVSFWI +A
Sbjct: 211 SIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDA 270
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 271 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNY 328
>gi|325297032|ref|NP_001191520.1| GluClAc2 [Aplysia californica]
gi|253918125|gb|ACT37244.1| GluClAc2 [Aplysia californica]
Length = 429
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 180/301 (59%), Gaps = 5/301 (1%)
Query: 175 LVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRL 234
L++N+ Y + P++ + T + + + S+ ++E MDYS+ Y RQ W D RL
Sbjct: 49 LIVNS--STYNARIAPDYEQDHATTVDVQIYVLSIDTVNEQSMDYSLHIYLRQRWVDPRL 106
Query: 235 SFMGPINN--LSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRL 292
FM L L K++ K+W PDT+ N K+ H +TVPN+L+ + ++G I YSMRL
Sbjct: 107 QFMNYSRAVWLELDAKLMSKVWVPDTFFRNEKKGEFHIVTVPNRLMHLYRNGTIYYSMRL 166
Query: 293 TIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISFVPGMAISQFDFISS 352
++ +C M L+ +P+D Q CP+++ SY Y E ++Y W K I + + +SQ+ +
Sbjct: 167 SVLLSCHMKLQKYPLDVQKCPILIASYGYTTENIIYRWIDHKPIDYQDNLQLSQYTLVGE 226
Query: 353 PKRNFTFKRRE-GEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDR 411
N T +E G FS ++ +F LKR G+++IQVYVP VLIV+LSWVSFW+ EA R
Sbjct: 227 SLDNCTKTYKETGSFSCVRADFILKRDVGFYIIQVYVPSVLIVILSWVSFWLDIEAIPAR 286
Query: 412 IGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKLCY 471
I LG+ TVLT++T S +R+ LP+V Y A+D ++ F+ A++LEFA ++ +
Sbjct: 287 ISLGVLTVLTMTTQSSGARSSLPRVSYVKAIDVWMATCLFFVFASLLEFAYINVLARRRM 346
Query: 472 P 472
P
Sbjct: 347 P 347
>gi|397465577|ref|XP_003804567.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Pan
paniscus]
Length = 506
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 183/301 (60%), Gaps = 4/301 (1%)
Query: 169 IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFR 226
+GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F
Sbjct: 65 VGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEYTIDIIFS 123
Query: 227 QYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
Q W D RLS+ +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +
Sbjct: 124 QTWYDERLSYNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKV 183
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+ +
Sbjct: 184 LYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLF 243
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QFDF + G+F ++ + FN+ R GY Q YVP + +LSWVSFWI
Sbjct: 244 QFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKT 303
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 304 ESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNF 363
Query: 466 F 466
Sbjct: 364 L 364
>gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
Length = 472
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 187/298 (62%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 30 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 88
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 89 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 148
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP-GKSISFVPGMAISQF 347
+R+T C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 149 GLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 209 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 268
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 269 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNY 326
>gi|355692547|gb|EHH27150.1| GABA(A) receptor subunit gamma-3, partial [Macaca mulatta]
Length = 388
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 158/261 (60%), Gaps = 1/261 (0%)
Query: 213 SEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTIT 272
S + +Y +D +F Q W DSRL F + L+L+ M+ IW PDT N K + H IT
Sbjct: 7 SALFQEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWIT 66
Query: 273 VPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTP 332
PN+LLRI DG ILY++RLTI A C + L NFPMD SCPLI SY YP E+++Y W
Sbjct: 67 TPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRK 126
Query: 333 GK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
+ + QFDF+ G++ ++ + F L R GYF IQ Y+PC+
Sbjct: 127 NSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCI 186
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
L VVLSWVSFWI ++AT R LGITTVLT++T+S +R LP+V Y TA+D F+ + F
Sbjct: 187 LTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFL 246
Query: 452 YCIATILEFAAVHYFTKLCYP 472
+ A ++E+A ++Y++ P
Sbjct: 247 FVFAALMEYATLNYYSSCRKP 267
>gi|55829087|gb|AAV66543.1| beta subunit-GABA-A-gated chloride channel [Anopheles gambiae]
Length = 459
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 180/312 (57%), Gaps = 27/312 (8%)
Query: 177 LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSF 236
++ +L+ Y PN G GEP + ++ I S ISE++MDY++ Y QYW+D RL+F
Sbjct: 1 ISRILEGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAF 59
Query: 237 M---------------------GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPN 275
G + ++LS EKIW PDT+ N K S++H +T N
Sbjct: 60 NAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 119
Query: 276 KLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW--TPG 333
KL+R+ DG + Y MR T C M L +P+D+Q+C + + SY Y + +V +W TP
Sbjct: 120 KLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRSTP- 178
Query: 334 KSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLI 393
I V + QF I + K G + L ++F L+R+ GYFV Q Y+P +LI
Sbjct: 179 --IRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILI 236
Query: 394 VVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYC 453
V+LSWVSFWI+ EATS R+ LGITTVLT++TIS R+ LP++ Y A+D +L+M F +
Sbjct: 237 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 296
Query: 454 IATILEFAAVHY 465
A +LE+AAV+Y
Sbjct: 297 FAALLEYAAVNY 308
>gi|449485790|ref|XP_002190704.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Taeniopygia guttata]
Length = 469
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 181/284 (63%), Gaps = 6/284 (2%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIK 248
P G G P + ++ + S+ ISE+DMD++M Y R YW+D RLSF N +++ +
Sbjct: 77 PGFG-GSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSNKNKSMTFDGR 135
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H TV N +LR+ DG++L+S+R+T+ A C M FP+D
Sbjct: 136 LIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAMCFMDFSRFPLD 195
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGE 365
TQ+C L L SYAY + L+ +W G KS+S +++SQF FI S F G
Sbjct: 196 TQNCSLELESYAYNEDDLMLYWKHGNKSLSTDEHISLSQF-FIEEFSASSGLAFYSSTGW 254
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 255 YNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 314
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + +++E+AAV+Y T +
Sbjct: 315 MTGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTI 358
>gi|351699522|gb|EHB02441.1| Gamma-aminobutyric acid receptor subunit gamma-3 [Heterocephalus
glaber]
Length = 361
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 156/257 (60%), Gaps = 1/257 (0%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y +D +F Q W DSRL F + L+L+ M+ IW PDT N K + H IT PN+L
Sbjct: 6 EYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQL 65
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SI 336
LRI DG ILY++RLTI A C + L NFPMD SCPLI SY YP E+++Y W
Sbjct: 66 LRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEA 125
Query: 337 SFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVL 396
+ + QFDF+ G++ ++ + F L R GYF IQ Y+PC+L VVL
Sbjct: 126 ADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVL 185
Query: 397 SWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
SWVSFWI ++AT R LGITTVLT++T+S +R LP+V Y TA+D F+ + F + A
Sbjct: 186 SWVSFWIKKDATPARTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAA 245
Query: 457 ILEFAAVHYFTKLCYPG 473
++E+A ++Y++ P
Sbjct: 246 LMEYATLNYYSGCRKPA 262
>gi|348527838|ref|XP_003451426.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like,
partial [Oreochromis niloticus]
Length = 358
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 158/251 (62%), Gaps = 1/251 (0%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y +D F Q W DSRL + + L+L+ M+ IW PDT N K + H IT+PN+L
Sbjct: 1 EYQIDIIFAQTWTDSRLRYNSTMKILTLNSNMVGLIWLPDTIFRNSKTADSHWITMPNQL 60
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SI 336
LRI DG ILY++RLTI A C + L NFPMD SCPLI SY YP ++++Y W
Sbjct: 61 LRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPQDEMIYKWRKNSVEA 120
Query: 337 SFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVL 396
+ + QFDF+ K G++ ++ V F+L R GYF IQ Y+PC+L VVL
Sbjct: 121 ADQKSWRLYQFDFMGLRNTTDVIKTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVVL 180
Query: 397 SWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
SWVSFWI ++AT R LGITTVLT++T+S +RT LP+V Y TA+D F+ + F + A
Sbjct: 181 SWVSFWIKKDATPARTALGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFAA 240
Query: 457 ILEFAAVHYFT 467
++E+A ++Y++
Sbjct: 241 LMEYATLNYYS 251
>gi|1857126|gb|AAB49284.1| GABA-A receptor epsilon subunit [Homo sapiens]
gi|119619825|gb|EAW99419.1| gamma-aminobutyric acid (GABA) A receptor, epsilon, isoform CRA_e
[Homo sapiens]
Length = 506
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 182/301 (60%), Gaps = 4/301 (1%)
Query: 169 IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFR 226
+GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F
Sbjct: 65 VGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTVEIAVNSLGPLSILDMEYTIDIIFS 123
Query: 227 QYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
Q W D RL + +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +
Sbjct: 124 QTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKV 183
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+ +
Sbjct: 184 LYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLF 243
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QFDF + G+F ++ + FN+ R GY Q YVP + +LSWVSFWI
Sbjct: 244 QFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKT 303
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 304 ESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNF 363
Query: 466 F 466
Sbjct: 364 L 364
>gi|426217333|ref|XP_004002908.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Ovis
aries]
Length = 468
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 201/328 (61%), Gaps = 13/328 (3%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNL-------LKNYQSSEPPNHGKGEPTIIKTNML 205
P+ S+ +++ +K + + K + + L ++++ + P G G P + ++
Sbjct: 32 PRCSSSMEQTRKQESRMRKEDSTKVWPLKYKQILHIEDHDFAMRPGFG-GSPVPVGIDVQ 90
Query: 206 IRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIKMLEKIWRPDTYILNGK 264
+ S+ ISE+DMD++M Y R YW+D RL+F N +++ +++EKIW PD + ++ K
Sbjct: 91 VESIDSISEVDMDFTMTFYLRHYWKDERLAFPSKTNKSMTFDHRLIEKIWVPDIFFVHSK 150
Query: 265 QSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIE 324
+S++H V N +LR++ DG++L+S+R+T+ A C M FP+DTQ+C L L SYAY E
Sbjct: 151 RSFIHDTAVENIMLRVHPDGNVLFSVRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEE 210
Query: 325 KLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGEFSLLQVNFNLKRHRGY 381
L+ +W G KS++ +++SQF FI S F F G ++ L +NF L+RH +
Sbjct: 211 DLMLYWKHGNKSLNTDEHISLSQF-FIEEFSASSGFAFYSSTGWYNRLFINFVLRRHIFF 269
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI +P+V Y A
Sbjct: 270 FVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTILSGVSASMPQVSYIKA 329
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTKL 469
+D +L +S + +++E+AAV+Y T +
Sbjct: 330 VDVYLWVSSLFVFLSVIEYAAVNYLTTV 357
>gi|395857174|ref|XP_003800981.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon
[Otolemur garnettii]
Length = 510
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 181/302 (59%), Gaps = 4/302 (1%)
Query: 169 IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFR 226
+GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F
Sbjct: 65 VGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTAEISVNSLGPLSIMDMEYTIDIIFY 123
Query: 227 QYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
Q W D RL + L L+ M+ ++W PDT+ N K++ H IT+PN+++RI++DG +
Sbjct: 124 QTWYDERLRYNDTFETLVLNGNMVSQLWIPDTFFRNSKRTQEHEITMPNQMVRIHKDGKV 183
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+ +
Sbjct: 184 LYTIRMTIDAGCSLHMLKFPMDSHSCPLSFSSFSYPETEMIYKWDNFKLEINEKNSWKLF 243
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QFD + G F ++ FN+ R GY +Q YVP + +LSWVSFWI +
Sbjct: 244 QFDVKGVSNKTEIISTPSGNFMVMTFFFNVSRRFGYVAVQNYVPSSVTTMLSWVSFWIKK 303
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ M F +C ++EFA +++
Sbjct: 304 ESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAMCFVFCFCALMEFAVLNF 363
Query: 466 FT 467
T
Sbjct: 364 LT 365
>gi|410920938|ref|XP_003973940.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Takifugu rubripes]
Length = 410
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 158/251 (62%), Gaps = 1/251 (0%)
Query: 218 DYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKL 277
+Y +D F Q W DSRL + + L+L+ M+ IW PDT N K + H IT+PN+L
Sbjct: 30 EYQIDIIFAQTWTDSRLRYNSTMKLLTLNSNMVGLIWLPDTIFRNSKTADSHWITMPNQL 89
Query: 278 LRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SI 336
LRI DG ILY++RLTI A C + L NFPMD SCPL+ SY YP ++++Y W
Sbjct: 90 LRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLVFSSYGYPRDEMIYKWRKNSVEA 149
Query: 337 SFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVL 396
+ + QFDF+ K G++ L+ V F+L R GYF IQ Y+PC+L VVL
Sbjct: 150 ADQKSWRLYQFDFMGLRNTTDIIKTTSGDYVLMTVYFDLSRRMGYFTIQTYIPCILTVVL 209
Query: 397 SWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIAT 456
SWVSFWI ++AT R LGITTVLT++T+S +RT LP+V Y TA+D F+ + F + A
Sbjct: 210 SWVSFWIKKDATPARTALGITTVLTMTTLSSVARTSLPRVSYVTAMDLFVTVCFLFVFAA 269
Query: 457 ILEFAAVHYFT 467
++E+A ++Y++
Sbjct: 270 LMEYATLNYYS 280
>gi|326913085|ref|XP_003202872.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Meleagris gallopavo]
Length = 433
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 181/284 (63%), Gaps = 6/284 (2%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIK 248
P G G P + ++ + S+ ISE+DMD++M Y R YW+D RLSF N +++ +
Sbjct: 41 PGFG-GSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKNKSMTFDGR 99
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H TV N +LR+ DG++L+S+R+T+ A C M FP+D
Sbjct: 100 LIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSLRITVSAMCFMDFSRFPLD 159
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGE 365
TQ+C L L SYAY + L+ +W G +S+S +++SQF FI S F G
Sbjct: 160 TQNCSLELESYAYNEDDLMLYWKHGNESLSTDEHISLSQF-FIEEFSASSGLAFYSSTGW 218
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 219 YNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 278
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + +++E+AAV+Y T +
Sbjct: 279 ITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTI 322
>gi|297711323|ref|XP_002832293.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Pongo
abelii]
Length = 506
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 184/308 (59%), Gaps = 4/308 (1%)
Query: 162 KKKHDLMIGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDY 219
K + +GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y
Sbjct: 58 KAETGRRVGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEY 116
Query: 220 SMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLR 279
++D F Q W D RL + +L L+ ++ ++W PDT+ N K+++ H IT+PN+++R
Sbjct: 117 TIDIIFSQTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVR 176
Query: 280 INQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISF 338
I +DG +LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+
Sbjct: 177 IYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPESEMIYKWENFKLEINE 236
Query: 339 VPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSW 398
+ QFDF + G+F ++ + FN+ R GY Q YVP + +LSW
Sbjct: 237 KNSWKLFQFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSW 296
Query: 399 VSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATIL 458
VSFWI E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C +L
Sbjct: 297 VSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALL 356
Query: 459 EFAAVHYF 466
EFA +++
Sbjct: 357 EFAVLNFL 364
>gi|402911758|ref|XP_003918474.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon [Papio
anubis]
gi|355705249|gb|EHH31174.1| hypothetical protein EGK_21052 [Macaca mulatta]
gi|355757788|gb|EHH61313.1| hypothetical protein EGM_19299 [Macaca fascicularis]
gi|380811410|gb|AFE77580.1| gamma-aminobutyric acid receptor subunit epsilon precursor [Macaca
mulatta]
Length = 506
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 178/292 (60%), Gaps = 2/292 (0%)
Query: 176 VLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLS 235
+LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F Q W D RL
Sbjct: 74 ILNTILSNYDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEYTIDIIFSQTWYDERLC 132
Query: 236 FMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIK 295
+ +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +LY++R+TI
Sbjct: 133 YNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKVLYTIRMTID 192
Query: 296 ANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPK 354
A C + + FPMD+ SCPL S++YP +++Y W K I+ + QFDF
Sbjct: 193 AGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLFQFDFTGVSN 252
Query: 355 RNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGL 414
+ G+F ++ + FN+ R GY Q YVP + +LSWVSFWI E+ R L
Sbjct: 253 KTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSL 312
Query: 415 GITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYF 466
GIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 313 GITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNFL 364
>gi|391327458|ref|XP_003738217.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 514
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 181/306 (59%), Gaps = 6/306 (1%)
Query: 168 MIGKNITLVLNNLLKN--YQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYF 225
M G+N++ +L + ++ Y PN+G G+P + M I S+ +SE+ MD++ D YF
Sbjct: 1 MKGQNVSNILRSFFESGKYDKRVRPNYG-GKPVDVGITMQIISISTVSEVQMDFTSDFYF 59
Query: 226 RQYWRDSRLSFM--GPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQD 283
RQ WRD RLSF ++++ + ++ +KIW PDT+ N K +Y HT T N LRI
Sbjct: 60 RQTWRDERLSFTRTKDLDSMIVGAEVADKIWVPDTFFANEKSAYFHTATTDNTFLRIKAG 119
Query: 284 GDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGM 342
GDIL S+RLT+ A CPM LR FPMD QSC + + S+ Y + Y W G KS+ P +
Sbjct: 120 GDILRSIRLTVTATCPMDLRYFPMDRQSCAIEIESFGYTTTDISYKWADGEKSVRISPDV 179
Query: 343 AISQFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFW 402
+ QF + ++ G +S L R GY++IQ+Y+P LIVV+SWVSFW
Sbjct: 180 ELPQFKVLGHQQKTIVVTLSTGNYSRLVCEIRFGRAMGYYLIQIYIPAGLIVVISWVSFW 239
Query: 403 IHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAA 462
+HR AT R+ LG+TTVLT++T+ + + LPK+ Y ++D +L F A++LE+A
Sbjct: 240 LHRNATPARVALGVTTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLLEYAT 299
Query: 463 VHYFTK 468
V Y K
Sbjct: 300 VGYLGK 305
>gi|432098879|gb|ELK28374.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Myotis davidii]
Length = 402
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 170/302 (56%), Gaps = 55/302 (18%)
Query: 171 KNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWR 230
KN++ +L+NLL+ Y + P G G T +KT++ + S GP+S+++M+Y+MD +FRQ W
Sbjct: 30 KNVSRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWT 88
Query: 231 DSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSM 290
D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T PNKL RI Q+G ILY+M
Sbjct: 89 DERLKFRGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
Query: 291 RLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGKSISF-VPGMAIS--QF 347
RLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G S VP + S Q+
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
D I + T K G
Sbjct: 209 DLIGQTASSETIKSNTG------------------------------------------- 225
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFT 467
ITTVLT++T+S+ +R LPKV YATA+DWF+ + F + + ++EFAAV+YFT
Sbjct: 226 --------ITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 277
Query: 468 KL 469
L
Sbjct: 278 NL 279
>gi|300795702|ref|NP_001179448.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Bos
taurus]
gi|296491566|tpg|DAA33609.1| TPA: gamma-aminobutyric acid receptor subunit rho-3-like [Bos
taurus]
Length = 468
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 201/328 (61%), Gaps = 13/328 (3%)
Query: 153 PKVSNHLKEKKKHDLMIGKNITLVLNNL-------LKNYQSSEPPNHGKGEPTIIKTNML 205
P+ S+ +++ +K + + K + + L ++++ + P G G P + ++
Sbjct: 32 PRCSSSMEQTRKQETRMRKEDSTKVWPLKYKQILHIEDHDFAMRPGFG-GSPVPVGIDVQ 90
Query: 206 IRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIKMLEKIWRPDTYILNGK 264
+ S+ ISE+DMD++M Y R YW+D RL+F N +++ ++++KIW PD + ++ K
Sbjct: 91 VESIDSISEVDMDFTMTFYLRHYWKDERLAFPSKTNKSMTFDHRLIKKIWVPDIFFVHSK 150
Query: 265 QSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIE 324
+S++H TV N +LR++ DG +L+S+R+T+ A C M FP+DTQ+C L L SYAY E
Sbjct: 151 RSFIHDTTVENIMLRVHPDGSVLFSVRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEE 210
Query: 325 KLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGEFSLLQVNFNLKRHRGY 381
L+ +W G KS++ +++SQF FI S F F G ++ L +NF L+RH +
Sbjct: 211 DLMLYWKHGNKSLNTDEHISLSQF-FIEEFSASSGFAFYSSTGWYNRLFINFVLRRHIFF 269
Query: 382 FVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATA 441
FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI +P+V Y A
Sbjct: 270 FVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTILSGVSASMPQVSYIKA 329
Query: 442 LDWFLLMSFFYCIATILEFAAVHYFTKL 469
+D +L +S + +++E+AAV+Y T +
Sbjct: 330 VDVYLWVSSLFVFLSVIEYAAVNYLTTV 357
>gi|354495036|ref|XP_003509638.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Cricetulus griseus]
Length = 340
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 187/298 (62%), Gaps = 5/298 (1%)
Query: 172 NITLV---LNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQY 228
N++LV ++ LLK Y P+ G G P + N+ I S+ +SE++MDY++ YF+Q
Sbjct: 13 NMSLVKETVDRLLKGYDIRLRPDFG-GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQA 71
Query: 229 WRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILY 288
WRD RLS+ NL+L ++ +++W PDTY LN K+S+VH +TV N+++R++ DG +LY
Sbjct: 72 WRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 131
Query: 289 SMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQF 347
+R+T A C M LR +P+D Q+C L + SY Y + + ++W +++ V + + QF
Sbjct: 132 GLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQF 191
Query: 348 DFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREA 407
+ G + L ++F LKR+ GYF++Q Y+P +LI +LSWVSFWI+ +A
Sbjct: 192 SIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDA 251
Query: 408 TSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
++ R+ LGITTVLT++TI+ R LPK+ Y A+ +L+ F + +LE+A V+Y
Sbjct: 252 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFVFMALLEYALVNY 309
>gi|90076504|dbj|BAE87932.1| unnamed protein product [Macaca fascicularis]
Length = 341
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 180/277 (64%), Gaps = 9/277 (3%)
Query: 194 KGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKI 253
+G P + + + S+ +SE++MDY++ YF+Q W+D RLS+ G NL+L ++ +++
Sbjct: 10 EGPPWTLGCRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQL 69
Query: 254 WRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCP 313
W PDTY LN K+S+VH +TV N+++R++ DG +LY +R+T A C M LR +P+D Q+C
Sbjct: 70 WVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT 129
Query: 314 LILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFIS----SPKRNFTFKRREGEFSL 368
L + SY Y + + ++W G+ +++ V + + QF + S K FT G +
Sbjct: 130 LEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFT----TGAYPR 185
Query: 369 LQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLD 428
L ++F LKR+ GYF++Q Y+P LI +LSW+SFWI+ +A++ R+ LGITTVLT++TIS
Sbjct: 186 LSLSFRLKRNIGYFILQTYMPSTLITILSWMSFWINYDASAARVALGITTVLTMTTISTH 245
Query: 429 SRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
R LPK+ Y A+D +L+ F + +LE+A V+Y
Sbjct: 246 LRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNY 282
>gi|218156328|ref|NP_001019623.2| glycine receptor subunit alpha-4 isoform 1 precursor [Homo sapiens]
gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
Length = 417
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S I++ MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +C M
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y ++ LV+ W ++ G+ + QF K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AA+++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSR 344
>gi|52426761|ref|NP_004952.2| gamma-aminobutyric acid receptor subunit epsilon precursor [Homo
sapiens]
gi|13124728|sp|P78334.2|GBRE_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit epsilon;
AltName: Full=GABA(A) receptor subunit epsilon; Flags:
Precursor
gi|2285961|emb|CAA70904.1| GABA receptor epsilon subunit [Homo sapiens]
gi|2735349|gb|AAB94645.1| GABA-A receptor epsilon subunit [Homo sapiens]
Length = 506
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 182/301 (60%), Gaps = 4/301 (1%)
Query: 169 IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFR 226
+GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F
Sbjct: 65 VGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEYTIDIIFS 123
Query: 227 QYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
Q W D RL + +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +
Sbjct: 124 QTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKV 183
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+ +
Sbjct: 184 LYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLF 243
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QFDF + G+F ++ + FN+ R GY Q YVP + +LSWVSFWI
Sbjct: 244 QFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKT 303
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 304 ESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNF 363
Query: 466 F 466
Sbjct: 364 L 364
>gi|426397765|ref|XP_004065076.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon
[Gorilla gorilla gorilla]
Length = 506
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 182/301 (60%), Gaps = 4/301 (1%)
Query: 169 IGK--NITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFR 226
+GK + +LN +L NY P G+ +PT++ + + S+GP+S +DM+Y++D F
Sbjct: 65 VGKLPEASRILNTILSNYDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEYTIDIIFS 123
Query: 227 QYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDI 286
Q W D RL + +L L+ ++ ++W PDT+ N K+++ H IT+PN+++RI +DG +
Sbjct: 124 QTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKV 183
Query: 287 LYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAIS 345
LY++R+TI A C + + FPMD+ SCPL S++YP +++Y W K I+ +
Sbjct: 184 LYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWENFKLEINEKNSWKLF 243
Query: 346 QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHR 405
QFDF + G+F ++ + FN+ R GY Q YVP + +LSWVSFWI
Sbjct: 244 QFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKT 303
Query: 406 EATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
E+ R LGIT+VLT++T+ SR + P+V Y TALD+++ + F +C +LEFA +++
Sbjct: 304 ESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVLNF 363
Query: 466 F 466
Sbjct: 364 L 364
>gi|119575082|gb|EAW54695.1| hCG17971 [Homo sapiens]
Length = 458
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 4/289 (1%)
Query: 183 NYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG-PIN 241
Y + PN KG P + N+ I S +++ MDY ++ + RQ W D RLS+ P +
Sbjct: 57 GYDARIRPNF-KGPPVNVTCNIFINSFSSVTKTTMDYRVNVFLRQQWNDPRLSYREYPDD 115
Query: 242 NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMS 301
+L L ML+ IW+PD + N K + H +T NKLLRI ++G++LYS+RLT+ +C M
Sbjct: 116 SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMD 175
Query: 302 LRNFPMDTQSCPLILGSYAYPIEKLVYHW-TPGKSISFVPGMAISQFDFISSPKRNFTFK 360
L+NFPMD Q+C + L S+ Y ++ LV+ W ++ G+ + QF K
Sbjct: 176 LKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTK 235
Query: 361 R-REGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTV 419
G+F+ ++V F+L+R GY++IQ+Y+P +LIV+LSWVSFWI+ +A R+GLGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 420 LTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTK 468
LT++T S SR LPKV Y A+D ++ + + A +LE+AA+++ ++
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSR 344
>gi|395534596|ref|XP_003769326.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Sarcophilus harrisii]
Length = 455
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 204/345 (59%), Gaps = 23/345 (6%)
Query: 139 IMDDETKTHWTNRLPKVSNHLKEK-KKHDLMIGKNITLVLNNLLKNYQSSEPPNH----- 192
++ E + HW R ++E KK ++ ++ + + L K+ Q +H
Sbjct: 13 VLATEGRVHWQGR------EIQEVIKKGSSILKRSPDITKSPLTKSEQLLRIDDHDFSMR 66
Query: 193 -GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--K 248
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF NNLS++ +
Sbjct: 67 PGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSF-PSTNNLSMTFDGR 125
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+D
Sbjct: 126 LVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLD 185
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREG 364
TQ+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 186 TQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTG 243
Query: 365 EFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLST 424
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+ST
Sbjct: 244 WYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMST 303
Query: 425 ISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
I +P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 304 IITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV 348
>gi|126310323|ref|XP_001367190.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Monodelphis domestica]
Length = 473
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 205/357 (57%), Gaps = 29/357 (8%)
Query: 139 IMDDETKTHWTNR-------------LPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQ 185
++ E + HW R + H + K+ L++ ++ + + L K+ Q
Sbjct: 13 VLATEGRVHWQGREIQEMAKKGSRPERQRREVHEETHKQGSLILKRSPDITKSPLTKSEQ 72
Query: 186 SSEPPNH------GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMG 238
+H G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF
Sbjct: 73 LLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSF-P 131
Query: 239 PINNLSLSI--KMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKA 296
NNLS++ ++++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A
Sbjct: 132 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 191
Query: 297 NCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISS 352
C M FP+DTQ+C L + SYAY + L+ +W G S+ +++SQF +F ++
Sbjct: 192 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 251
Query: 353 PKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRI 412
K F G ++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+
Sbjct: 252 TK--LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 413 GLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
LGITTVLT+STI +P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWISFVFVFLSVLEYAAVNYLTTV 366
>gi|431918111|gb|ELK17339.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Pteropus alecto]
Length = 411
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 175/318 (55%), Gaps = 55/318 (17%)
Query: 155 VSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISE 214
V N L + + +NI+ +L+NLL+ Y + P G G T +KT++ + S GP+S+
Sbjct: 14 VENALGKLEDEGNFYSENISRILDNLLEGYDNRLRPGFG-GAVTEVKTDIYVTSFGPVSD 72
Query: 215 IDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPDTYILNGKQSYVHTITVP 274
++M+Y+MD +FRQ W D RL F GP LSL+ M+ KIW PDT+ NGK+S H +T P
Sbjct: 73 VEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTP 132
Query: 275 NKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPGK 334
NKL RI Q+G ILY+MRLTI A+CPM L NFPMD +CPL GSYAYP +++Y W G
Sbjct: 133 NKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGP 192
Query: 335 SISF-VPGMAIS--QFDFISSPKRNFTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCV 391
S VP + S Q+D I + T K G
Sbjct: 193 LYSVEVPEESSSLLQYDLIGQTVSSETIKSNTG--------------------------- 225
Query: 392 LIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFF 451
ITTVLT++T+S+ +R LPKV YATA+DWF+ + F
Sbjct: 226 ------------------------ITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFA 261
Query: 452 YCIATILEFAAVHYFTKL 469
+ + ++EFAAV+YFT L
Sbjct: 262 FVFSALIEFAAVNYFTNL 279
>gi|260822691|ref|XP_002606735.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
gi|229292079|gb|EEN62745.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
Length = 421
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 179/272 (65%), Gaps = 1/272 (0%)
Query: 195 GEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIW 254
G+P ++ +M I S+ ISE+D+DY++ + RQYW D RL F G LSL +++EK+W
Sbjct: 11 GQPVRVEMSMTIASIDQISEVDLDYTITLFLRQYWNDDRLIFRGVNRTLSLDGRLVEKLW 70
Query: 255 RPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPL 314
PD +++N KQS++HT+TV N+L+RI +GD+LY +R+T KA CPM LR +P+D Q+C L
Sbjct: 71 VPDIFLVNAKQSFLHTVTVDNRLIRIFPNGDVLYGLRVTAKAACPMDLRKYPLDEQNCTL 130
Query: 315 ILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNF 373
L SY Y E+L W G S++ + + +SQF K G + L +F
Sbjct: 131 ELESYGYTDEELELGWKAGNASVTGLGRLDLSQFTVGDYNTVAKLVKYETGNYWRLVFSF 190
Query: 374 NLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDL 433
L R YF++Q Y+P +L+V+LSWVSFW++ E+ R+ LGITTVLT++T++ +R+ L
Sbjct: 191 QLYRQIFYFILQTYLPMILLVILSWVSFWVNHESVPARVTLGITTVLTMTTLTSAARSSL 250
Query: 434 PKVRYATALDWFLLMSFFYCIATILEFAAVHY 465
PK+ Y A+D +++M F + A +LE+AAV++
Sbjct: 251 PKISYIKAIDVYMVMCFLFVFAALLEYAAVNF 282
>gi|332245501|ref|XP_003271898.1| PREDICTED: uncharacterized protein LOC100591227 isoform 1 [Nomascus
leucogenys]
Length = 506
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 193/330 (58%), Gaps = 14/330 (4%)
Query: 138 KIMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNHGKGEP 197
K++ +ETK+ T+ +V L E + +LN +L +Y P G+ +P
Sbjct: 48 KLLSEETKSTKTDTGRRVGK-LPEASR-----------ILNTILSHYDHKLRPGIGE-KP 94
Query: 198 TIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSIKMLEKIWRPD 257
T++ + + S+GP+S +DM+Y++D F Q W D RL + +L L+ ++ ++W PD
Sbjct: 95 TVVTVEISVNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDTFESLVLNGNVVSQLWIPD 154
Query: 258 TYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDTQSCPLILG 317
T+ N K+++ H IT+PN+++RI +DG +LY++R+TI A C + + FPMD+ SCPL
Sbjct: 155 TFFRNSKRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFS 214
Query: 318 SYAYPIEKLVYHWTPGK-SISFVPGMAISQFDFISSPKRNFTFKRREGEFSLLQVNFNLK 376
S++YP +++Y W K I+ + QFDF + G+F ++ + FN+
Sbjct: 215 SFSYPENEMIYKWENFKLEINEKNSWKLFQFDFTGVSNKTEIITTPVGDFMVMTIFFNVS 274
Query: 377 RHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTISLDSRTDLPKV 436
R GY Q YVP + +LSWVSFWI E+ R LGIT+VLT++T+ SR + P+V
Sbjct: 275 RRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRV 334
Query: 437 RYATALDWFLLMSFFYCIATILEFAAVHYF 466
Y TALD+++ + F +C +LEFA +++
Sbjct: 335 SYITALDFYIAICFVFCFCALLEFAVLNFL 364
>gi|395821320|ref|XP_003783992.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Otolemur
garnettii]
Length = 468
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 182/284 (64%), Gaps = 6/284 (2%)
Query: 190 PNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPIN-NLSLSIK 248
P G G P + ++ + S+ ISE++MD++M Y R YW+D RLSF N +++ +
Sbjct: 79 PGFG-GSPVPVAIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFPSTTNKSMTFDHR 137
Query: 249 MLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMD 308
+++KIW PD + ++ K+S++H T+ N +LR+ DG+IL+S+R+T+ A C M FP+D
Sbjct: 138 LIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVYPDGNILFSLRITVSAMCFMDFSRFPLD 197
Query: 309 TQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRNFTFKRREGE 365
TQ+C L L SYAY E L+ +W G KS++ +++SQF F+ S F F G
Sbjct: 198 TQNCSLELESYAYNEEDLMLYWKQGNKSLNTEEHISLSQF-FVEEFSASSGFAFYSSTGW 256
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +FV+Q Y P +L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 257 YNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 316
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+ +P+V Y A+D +L +S + +++E+AAV+Y T +
Sbjct: 317 TTSVSASMPQVSYVKAVDVYLWVSSTFVFLSVIEYAAVNYLTTV 360
>gi|332218465|ref|XP_003258375.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Nomascus leucogenys]
Length = 462
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 204/344 (59%), Gaps = 21/344 (6%)
Query: 139 IMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNH------ 192
++ E++ HW R H + KK ++ ++ + + L K+ Q +H
Sbjct: 19 VLATESRVHWPGR----EVH-EMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRP 73
Query: 193 GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--KM 249
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF NNLS++ ++
Sbjct: 74 GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS-TNNLSMTFDGRL 132
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+DT
Sbjct: 133 VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDT 192
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREGE 365
Q+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 193 QTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTGW 250
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 251 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 310
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 311 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV 354
>gi|297291319|ref|XP_002803870.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Macaca mulatta]
gi|402867632|ref|XP_003897945.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Papio anubis]
Length = 462
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 204/344 (59%), Gaps = 21/344 (6%)
Query: 139 IMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNH------ 192
++ E++ HW R H + KK ++ ++ + + L K+ Q +H
Sbjct: 19 VLATESRVHWPGR----EVH-EMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRP 73
Query: 193 GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--KM 249
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF NNLS++ ++
Sbjct: 74 GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS-TNNLSMTFDGRL 132
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+DT
Sbjct: 133 VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDT 192
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREGE 365
Q+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 193 QTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTGW 250
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 251 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 310
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 311 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV 354
>gi|440897658|gb|ELR49302.1| Gamma-aminobutyric acid receptor subunit rho-3 [Bos grunniens
mutus]
Length = 418
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 186/293 (63%), Gaps = 6/293 (2%)
Query: 181 LKNYQSSEPPNHGKGEPTIIKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPI 240
++++ + P G G P + ++ + S+ ISE+DMD++M Y R YW+D RL+F
Sbjct: 20 IEDHDFAMRPGFG-GSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWKDERLAFPSKT 78
Query: 241 N-NLSLSIKMLEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCP 299
N +++ ++++KIW PD + ++ K+S++H TV N +LR++ DG +L+S+R+T+ A C
Sbjct: 79 NKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSAMCF 138
Query: 300 MSLRNFPMDTQSCPLILGSYAYPIEKLVYHWTPG-KSISFVPGMAISQFDFIS--SPKRN 356
M FP+DTQ+C L L SYAY E L+ +W G KS++ +++SQF FI S
Sbjct: 139 MDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQF-FIEEFSASSG 197
Query: 357 FTFKRREGEFSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGI 416
F F G ++ L +NF L+RH +FV+Q Y P +L+V+LSWVSFWI R A R+ LGI
Sbjct: 198 FAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGI 257
Query: 417 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
TTVLT+STI +P+V Y A+D +L +S + +++E+AAV+Y T +
Sbjct: 258 TTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNYLTTV 310
>gi|410959652|ref|XP_003986417.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Felis catus]
Length = 462
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 204/344 (59%), Gaps = 21/344 (6%)
Query: 139 IMDDETKTHWTNRLPKVSNHLKEKKKHDLMIGKNITLVLNNLLKNYQSSEPPNH------ 192
++ E++ HW R H + KK ++ ++ + + L K+ Q +H
Sbjct: 19 VLATESRVHWRRR----EVH-EMSKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRP 73
Query: 193 GKGEPTI-IKTNMLIRSMGPISEIDMDYSMDCYFRQYWRDSRLSFMGPINNLSLSI--KM 249
G G P I + ++ + S+ ISE+DMD++M Y R YW+D RLSF NNLS++ ++
Sbjct: 74 GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS-TNNLSMTFDGRL 132
Query: 250 LEKIWRPDTYILNGKQSYVHTITVPNKLLRINQDGDILYSMRLTIKANCPMSLRNFPMDT 309
++KIW PD + ++ K+S++H T N +LR+ DG +LYS+R+T+ A C M FP+DT
Sbjct: 133 VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDT 192
Query: 310 QSCPLILGSYAYPIEKLVYHWTPGK-SISFVPGMAISQF---DFISSPKRNFTFKRREGE 365
Q+C L + SYAY + L+ +W G S+ +++SQF +F ++ K F G
Sbjct: 193 QTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTK--LAFYSSTGW 250
Query: 366 FSLLQVNFNLKRHRGYFVIQVYVPCVLIVVLSWVSFWIHREATSDRIGLGITTVLTLSTI 425
++ L +NF L+RH +F++Q Y P L+V+LSWVSFWI R A R+ LGITTVLT+STI
Sbjct: 251 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 310
Query: 426 SLDSRTDLPKVRYATALDWFLLMSFFYCIATILEFAAVHYFTKL 469
+P+V Y A+D +L +SF + ++LE+AAV+Y T +
Sbjct: 311 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV 354
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,431,090,493
Number of Sequences: 23463169
Number of extensions: 298889191
Number of successful extensions: 745587
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3151
Number of HSP's successfully gapped in prelim test: 2774
Number of HSP's that attempted gapping in prelim test: 734652
Number of HSP's gapped (non-prelim): 6759
length of query: 488
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 341
effective length of database: 8,910,109,524
effective search space: 3038347347684
effective search space used: 3038347347684
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)