Query psy12318
Match_columns 392
No_of_seqs 140 out of 1353
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 16:00:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ukw_A Acyl-COA dehydrogenase; 100.0 6.8E-72 2.3E-76 533.2 41.3 378 7-389 1-378 (379)
2 1ivh_A Isovaleryl-COA dehydrog 100.0 6.9E-72 2.3E-76 535.6 41.1 390 3-392 5-394 (394)
3 2vig_A Short-chain specific ac 100.0 8.7E-72 3E-76 534.4 41.4 381 7-391 2-382 (391)
4 3pfd_A Acyl-COA dehydrogenase; 100.0 2.1E-72 7.2E-77 539.0 36.9 379 6-389 14-393 (393)
5 2d29_A Acyl-COA dehydrogenase; 100.0 2E-71 6.8E-76 531.4 43.3 382 7-390 3-386 (387)
6 2jif_A Short/branched chain sp 100.0 1.6E-71 5.5E-76 534.0 42.7 381 6-391 24-404 (404)
7 1egd_A Medium chain acyl-COA d 100.0 1.7E-71 5.9E-76 533.2 41.2 383 7-392 12-395 (396)
8 1buc_A Butyryl-COA dehydrogena 100.0 2E-71 6.7E-76 530.9 40.7 379 7-389 1-383 (383)
9 3p4t_A Putative acyl-COA dehyd 100.0 6E-71 2E-75 530.4 42.5 377 6-387 21-399 (403)
10 3nf4_A Acyl-COA dehydrogenase; 100.0 6.5E-71 2.2E-75 528.0 41.5 375 8-389 13-387 (387)
11 3r7k_A Probable acyl COA dehyd 100.0 7.7E-71 2.6E-75 529.7 41.3 378 5-387 23-401 (403)
12 1rx0_A Acyl-COA dehydrogenase 100.0 1.3E-70 4.4E-75 526.4 42.7 382 3-390 11-393 (393)
13 2dvl_A Acyl-COA dehydrogenase; 100.0 1.4E-70 5E-75 522.7 41.2 372 9-389 1-372 (372)
14 2pg0_A Acyl-COA dehydrogenase; 100.0 2.6E-70 8.8E-75 523.4 42.9 378 6-387 4-383 (385)
15 3ii9_A Glutaryl-COA dehydrogen 100.0 2.3E-71 8E-76 532.3 32.9 378 6-389 14-391 (396)
16 3sf6_A Glutaryl-COA dehydrogen 100.0 3.7E-70 1.3E-74 524.9 39.7 373 6-389 25-398 (403)
17 4hr3_A Putative acyl-COA dehyd 100.0 2.7E-70 9.3E-75 528.2 37.5 384 6-392 4-413 (415)
18 3swo_A Glutaryl-COA dehydrogen 100.0 6.4E-70 2.2E-74 522.8 38.9 374 6-390 21-394 (399)
19 2eba_A Putative glutaryl-COA d 100.0 1.1E-69 3.7E-74 519.0 40.2 376 5-389 5-381 (385)
20 3mpi_A Glutaryl-COA dehydrogen 100.0 4.2E-70 1.4E-74 524.1 35.7 375 7-387 1-382 (397)
21 2ix5_A Acyl-coenzyme A oxidase 100.0 3.4E-69 1.2E-73 521.6 39.5 374 7-389 51-424 (436)
22 1r2j_A Protein FKBI; polyketid 100.0 1.7E-68 5.9E-73 507.2 33.6 360 20-389 2-363 (366)
23 3owa_A Acyl-COA dehydrogenase; 100.0 7.3E-68 2.5E-72 528.2 38.6 376 7-391 29-426 (597)
24 1siq_A GCD, glutaryl-COA dehyd 100.0 1.9E-67 6.4E-72 504.7 39.0 374 6-389 9-384 (392)
25 2z1q_A Acyl-COA dehydrogenase; 100.0 1.4E-66 4.9E-71 519.3 37.5 373 9-390 26-415 (577)
26 3mkh_A Nitroalkane oxidase; ox 100.0 4.9E-67 1.7E-71 509.0 32.5 380 7-390 3-417 (438)
27 2wbi_A Acyl-COA dehydrogenase 100.0 2.1E-66 7.1E-71 502.4 33.0 385 4-391 16-420 (428)
28 2c12_A Nitroalkane oxidase; ox 100.0 1.6E-65 5.5E-70 498.2 36.8 380 7-389 2-419 (439)
29 2uxw_A VERY-long-chain specifi 100.0 1.8E-64 6E-69 505.3 38.9 375 9-387 44-428 (607)
30 3mxl_A Nitrososynthase; flavin 100.0 1E-62 3.4E-67 472.9 28.4 369 6-389 4-393 (395)
31 3m9v_A FAD-dependent oxidoredu 100.0 1.2E-61 4.1E-66 471.2 32.6 371 5-390 14-405 (439)
32 2or0_A Hydroxylase; APC7385, r 100.0 2.7E-62 9.1E-67 472.3 26.3 364 6-390 13-402 (414)
33 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.8E-60 9.4E-65 455.7 30.4 354 16-390 10-387 (394)
34 2jbr_A P-hydroxyphenylacetate 100.0 1.3E-60 4.3E-65 461.5 27.5 360 8-390 32-415 (422)
35 1w07_A Acyl-COA oxidase; oxido 100.0 1.9E-54 6.5E-59 437.1 29.3 366 13-392 29-443 (659)
36 3djl_A Protein AIDB; alpha hel 100.0 1.1E-53 3.7E-58 421.1 31.9 328 46-390 88-442 (541)
37 2ddh_A Acyl-COA oxidase; beta 100.0 1.6E-50 5.6E-55 407.7 30.0 364 12-391 26-439 (661)
38 1u8v_A Gamma-aminobutyrate met 100.0 2E-39 7E-44 315.8 27.4 254 104-366 118-404 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 6.1E-39 2.1E-43 312.0 29.1 265 111-387 122-422 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 8.7E-34 3E-38 275.3 25.4 263 112-387 132-430 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 1.2E-28 4.1E-33 239.7 24.7 236 113-355 134-392 (517)
42 3owa_A Acyl-COA dehydrogenase; 95.0 0.26 8.8E-06 48.9 13.1 108 281-390 482-592 (597)
43 2uxw_A VERY-long-chain specifi 78.6 34 0.0012 33.7 13.8 68 281-348 506-574 (607)
44 2z1q_A Acyl-COA dehydrogenase; 76.7 58 0.002 31.7 15.5 101 282-390 469-570 (577)
No 1
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.8e-72 Score=533.18 Aligned_cols=378 Identities=38% Similarity=0.609 Sum_probs=361.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
|+|.++++++++++.+++|+++.+.+...+.|+.+.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~ 78 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVPW--PVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAY 78 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTGGGHHHHHHHTCCCH--HHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 678999999999999999999999998888888889999 999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeee
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWIT 166 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs 166 (392)
+|+++++.+..|. ++...|..+|+++|+++|+|++.+|+.++|+++|||++|||...+.|+++++++||+|||+|.|+|
T Consensus 79 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 157 (379)
T 1ukw_A 79 ACMGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWIS 157 (379)
T ss_dssp HCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEeccc
Confidence 9999998888885 778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHH
Q psy12318 167 NGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLM 246 (392)
Q Consensus 167 ~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~ 246 (392)
|+.+||+++|.++++++. +..++++|+||.+.|||++.++|+++|++++++++|.||||+||++++++.++.|+....
T Consensus 158 ~~~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~ 235 (379)
T 1ukw_A 158 NGGEAEWVVVFATVNPEL--RHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAM 235 (379)
T ss_dssp TTTTEEEEEEEEESCGGG--GGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHH
T ss_pred CCCcCCEEEEEEEcCCCC--CCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHH
Confidence 999999999999986432 456789999999999999999999999999999999999999999999999999998888
Q ss_pred HhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q psy12318 247 SGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKEC 326 (392)
Q Consensus 247 ~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (392)
..+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+....+
T Consensus 236 ~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~ 315 (379)
T 1ukw_A 236 QTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHAS 315 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999877777889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 327 AGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 327 ~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
+++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+|+
T Consensus 316 ~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 316 AIAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999885
No 2
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.9e-72 Score=535.64 Aligned_cols=390 Identities=64% Similarity=1.092 Sum_probs=365.7
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHH
Q psy12318 3 KIDDTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAME 82 (392)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~ 82 (392)
.+|++.|.++++++++++.+++|+.+++.+...+.|+++.+|..+++|+.|.+.||+++.+|++|||.|+++.+...+++
T Consensus 5 ~~~~~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 84 (394)
T 1ivh_A 5 PVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVME 84 (394)
T ss_dssp -CCCGGGTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHH
T ss_pred ccCccccCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHH
Confidence 34545588999999999999999999999988888888888876689999999999999999999999999999999999
Q ss_pred HHHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeE
Q psy12318 83 ELSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNK 162 (392)
Q Consensus 83 ~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k 162 (392)
+++++|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|+++++++||+|||+|
T Consensus 85 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K 164 (394)
T 1ivh_A 85 EISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNK 164 (394)
T ss_dssp HHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEE
T ss_pred HHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEE
Confidence 99999999999988886467789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccH
Q psy12318 163 FWITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGA 242 (392)
Q Consensus 163 ~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~ 242 (392)
.|+||+.+||+++|.++++++..++..++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+
T Consensus 165 ~~vs~~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~ 244 (394)
T 1ivh_A 165 FWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGV 244 (394)
T ss_dssp EEEETGGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHH
T ss_pred EeeCCCCcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchH
Confidence 99999999999999999864321244688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q psy12318 243 YVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSIN 322 (392)
Q Consensus 243 ~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (392)
......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+.
T Consensus 245 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~ 324 (394)
T 1ivh_A 245 YVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCT 324 (394)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhhcC
Q psy12318 323 SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAEYK 392 (392)
Q Consensus 323 ~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~~~ 392 (392)
...++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.++++|+
T Consensus 325 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~~ 394 (394)
T 1ivh_A 325 AKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADFH 394 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhcC
Confidence 7889999999999999999999999999999999999999999999999999999999999999999885
No 3
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=8.7e-72 Score=534.39 Aligned_cols=381 Identities=40% Similarity=0.654 Sum_probs=360.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
|+|.++++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++++
T Consensus 2 ~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 79 (391)
T 2vig_A 2 QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISR 79 (391)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCH--HHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCcccHHHHHhcCCCCH--HHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999999998888888889999 999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeee
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWIT 166 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs 166 (392)
+|+++++.+..|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|++++++|||+|||+|.|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 159 (391)
T 2vig_A 80 GCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWIT 159 (391)
T ss_dssp HCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeec
Confidence 99999988888843677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHH
Q psy12318 167 NGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLM 246 (392)
Q Consensus 167 ~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~ 246 (392)
|+.+||+++|.++++++. +..++++|+||.+.|||++.++|+++|++++++++|.||||+||++++++.++.|+....
T Consensus 160 ~~~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~ 237 (391)
T 2vig_A 160 NAWEASAAVVFASTDRAL--QNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAM 237 (391)
T ss_dssp TTTTCSEEEEEEECCSSS--TTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHH
T ss_pred CCCcCCEEEEEEEeCCCC--CCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHH
Confidence 999999999999986432 456799999999999999999999999999999999999999999999999999998888
Q ss_pred HhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q psy12318 247 SGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKEC 326 (392)
Q Consensus 247 ~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (392)
..+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++.+++++++++++.+++.++.+.+....+
T Consensus 238 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~ 317 (391)
T 2vig_A 238 QTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEA 317 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999877667889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhhc
Q psy12318 327 AGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAEY 391 (392)
Q Consensus 327 ~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~~ 391 (392)
+++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.++++|
T Consensus 318 ~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~ 382 (391)
T 2vig_A 318 AMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSY 382 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999875
No 4
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2.1e-72 Score=539.03 Aligned_cols=379 Identities=36% Similarity=0.576 Sum_probs=353.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
.|+|.++++++++++.+|+|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 14 ~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela 91 (393)
T 3pfd_A 14 FELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPE--EALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVA 91 (393)
T ss_dssp --------CHHHHHHHHHHHHHHHTGGGHHHHHHTTCCCH--HHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCchHHHHHhhhCCCCH--HHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHH
Confidence 4679999999999999999999999998888898899999 99999999999999999999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeee
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWI 165 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~v 165 (392)
++|+++++++..|. ++...+..+++++|+++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|+
T Consensus 92 ~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~ 170 (393)
T 3pfd_A 92 RVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWI 170 (393)
T ss_dssp TTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred hhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEe
Confidence 99999999877776 67778899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
||+.+||+++|.++++++. +..++++|+||++.|||++.++|+++|++++++++|.||||+||++++++.+++|+...
T Consensus 171 s~~~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~ 248 (393)
T 3pfd_A 171 TNGGKSTWYTVMAVTDPDK--GANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTA 248 (393)
T ss_dssp ETTTTCSEEEEEEESCGGG--GGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHH
T ss_pred cCCcccCEEEEEEEeCCCC--CCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHH
Confidence 9999999999999986542 55789999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-ChH
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSI-NSK 324 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 324 (392)
...+...|+.+++.++|+++++++.+++|+++|.+||+|+.++|.+|++|+++..++++++++++.+++.++.+.+ ...
T Consensus 249 ~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~ 328 (393)
T 3pfd_A 249 LATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGF 328 (393)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998765 667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 325 ECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 325 ~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
.++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|+|.+|+
T Consensus 329 ~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 329 ISAASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 88999999999999999999999999999999999999999999999999999999999999875
No 5
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=2e-71 Score=531.40 Aligned_cols=382 Identities=37% Similarity=0.569 Sum_probs=362.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
|+|.++++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++++
T Consensus 3 m~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 80 (387)
T 2d29_A 3 LWFEEGAEERQVLGPFREFLKAEVAPGAAERDRTGAFPW--DLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAY 80 (387)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHCCCCH--HHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999999998888888889999 999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeee
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWIT 166 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs 166 (392)
+|+++++.+..|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|+++++++||+|||+|.|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 160 (387)
T 2d29_A 81 YDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFIT 160 (387)
T ss_dssp HCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccC
Confidence 99999988888744677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCCC--CCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHH
Q psy12318 167 NGPDADIAVVYARTNPNA--DKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYV 244 (392)
Q Consensus 167 ~~~~ad~~lv~a~~~~~~--~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~ 244 (392)
|+.+||+++|.++++++. +++..++++|+||++.|||++.++|+++|++++++++|.||||+||++++++.++.|+..
T Consensus 161 ~~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~ 240 (387)
T 2d29_A 161 QGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYD 240 (387)
T ss_dssp TTTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHH
T ss_pred CCCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHH
Confidence 999999999999986431 013457999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChH
Q psy12318 245 LMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSK 324 (392)
Q Consensus 245 ~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+...
T Consensus 241 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~ 320 (387)
T 2d29_A 241 VLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTL 320 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999998776778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhh
Q psy12318 325 ECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 325 ~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~ 390 (392)
.++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.++++
T Consensus 321 ~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 321 EAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 899999999999999999999999999999999999999999999999999999999999999875
No 6
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.6e-71 Score=534.03 Aligned_cols=381 Identities=35% Similarity=0.627 Sum_probs=361.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
.|+|.++++++++++.+++|+++++.|...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~~p~~~~~d~~~~~~~--~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~ 101 (404)
T 2jif_A 24 APLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEK--SVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELA 101 (404)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHTGGGHHHHHHHTCCCH--HHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCH--HHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHH
Confidence 3678999999999999999999999998778888889999 99999999999999999999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeee
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWI 165 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~v 165 (392)
+.|+++++.+.+|..++..+|..+|+++||++|+|++.+|. ++++++|||++|||+..+.|+++++++||+|||+|.|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~i 180 (404)
T 2jif_A 102 KVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWI 180 (404)
T ss_dssp TTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEee
Confidence 99999999888886567788999999999999999999986 88999999999999999999999999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
||+.+||+++|.++++++. +..++++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.++.|+...
T Consensus 181 s~a~~Ad~~~v~ar~~~~~--~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~ 258 (404)
T 2jif_A 181 SSAEHAGLFLVMANVDPTI--GYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYA 258 (404)
T ss_dssp ETTTTCSEEEEEEESCGGG--GGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHH
T ss_pred cCCcccCEEEEEEEeCCCC--CCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHH
Confidence 9999999999999985432 44679999999999999999999999999999999999999999999999999999888
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHH
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKE 325 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
...+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+....
T Consensus 259 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~ 338 (404)
T 2jif_A 259 IGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKE 338 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999988777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhhc
Q psy12318 326 CAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAEY 391 (392)
Q Consensus 326 ~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~~ 391 (392)
++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.++++|
T Consensus 339 ~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~~ 404 (404)
T 2jif_A 339 ASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 404 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999876
No 7
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.7e-71 Score=533.21 Aligned_cols=383 Identities=34% Similarity=0.562 Sum_probs=361.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
|+|.++++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++++
T Consensus 12 m~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 89 (396)
T 1egd_A 12 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPV--PLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAY 89 (396)
T ss_dssp EECCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCH--HHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCH--HHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 568999999999999999999999888888888889998 999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeee
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWIT 166 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs 166 (392)
+|+++++.+ .|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||...+.|++++++|||+|||+|.|+|
T Consensus 90 ~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 168 (396)
T 1egd_A 90 GCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWIT 168 (396)
T ss_dssp HCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEE
T ss_pred hCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEccc
Confidence 999998877 5654566678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCCCCC-CCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 167 NGPDADIAVVYARTNPNADK-KQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 167 ~~~~ad~~lv~a~~~~~~~~-~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
|+.+||+++|.++++++.++ +..++++|+||.+.|||++.++|+++|++++++++|.||||+||+++++|.++.|+...
T Consensus 169 ~~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~ 248 (396)
T 1egd_A 169 NGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVA 248 (396)
T ss_dssp TTTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHH
T ss_pred CCcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHH
Confidence 99999999999998654210 12678999999999999999999999999999999999999999999999999999888
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHH
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKE 325 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
...+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+....
T Consensus 249 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~ 328 (396)
T 1egd_A 249 MGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYY 328 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999988777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhhcC
Q psy12318 326 CAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAEYK 392 (392)
Q Consensus 326 ~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~~~ 392 (392)
++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..|++.++++|+
T Consensus 329 ~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~~ 395 (396)
T 1egd_A 329 ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYK 395 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999885
No 8
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2e-71 Score=530.90 Aligned_cols=379 Identities=36% Similarity=0.595 Sum_probs=361.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCC---CCHHHHHHHHHH
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSE---MGYLDHVIAMEE 83 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~---~~~~~~~~~~~~ 83 (392)
|+|.++++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.| +++.+...++++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~ee 78 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDK--ELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEE 78 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTTTTTHHHHHHHTCCCH--HHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHH
Confidence 678999999999999999999999998888888889999 999999999999999999999999 999999999999
Q ss_pred HHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe-CCeEEEeeeE
Q psy12318 84 LSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK-GDMYVLNGNK 162 (392)
Q Consensus 84 la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~-~~g~~l~G~k 162 (392)
++++|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|+++++ ++||+|||+|
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K 158 (383)
T 1buc_A 79 LAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSK 158 (383)
T ss_dssp HHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEE
T ss_pred HHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEE
Confidence 999999999988888546778999999999999999999999999999999999999999999999999 9999999999
Q ss_pred eeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccH
Q psy12318 163 FWITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGA 242 (392)
Q Consensus 163 ~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~ 242 (392)
.|+||+.+||+++|.++++++. +.+++++|+||++.|||++.++|+++|++++++++|.||||+||++++++.++.|+
T Consensus 159 ~~~s~~~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~ 236 (383)
T 1buc_A 159 IFITNGGAADIYIVFAMTDKSK--GNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGF 236 (383)
T ss_dssp EEEETTTTCSEEEEEEESCSSS--STTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHH
T ss_pred eccCCCCcCCEEEEEEEeCCCC--CCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchH
Confidence 9999999999999999986442 45689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q psy12318 243 YVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSIN 322 (392)
Q Consensus 243 ~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (392)
......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+.
T Consensus 237 ~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~ 316 (383)
T 1buc_A 237 KIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPF 316 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 323 SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 323 ~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
...++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++
T Consensus 317 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 317 TVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 8889999999999999999999999999999999999999999999999999999999999999874
No 9
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=6e-71 Score=530.43 Aligned_cols=377 Identities=31% Similarity=0.479 Sum_probs=360.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
+|+|.++++++++++.+|+|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 21 ~M~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~ 98 (403)
T 3p4t_A 21 SMSIWTTAEREALRKTVRAFAEREVLPHAHEWERAGEIPR--ELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMH 98 (403)
T ss_dssp --CTTSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCH--HHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHH
Confidence 5889999999999999999999999998888898899999 99999999999999999999999999999999999999
Q ss_pred hcCCcc-hhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEee
Q psy12318 86 RSSASV-GLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFW 164 (392)
Q Consensus 86 ~~~~s~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~ 164 (392)
++|+++ ++.+..|..++...|..+|+++|+++|++++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 178 (403)
T 3p4t_A 99 YAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTY 178 (403)
T ss_dssp HTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEE
Confidence 999998 7888777656778899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHH
Q psy12318 165 ITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYV 244 (392)
Q Consensus 165 vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~ 244 (392)
+||+..||+++|.++++++ +..++++|+||.+.|||++.++|+++|++++++++|.||||+||++++++.+++|+..
T Consensus 179 vs~a~~Ad~~~v~a~~~~~---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~ 255 (403)
T 3p4t_A 179 ITSGVRADYVVTAARTGGP---GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQ 255 (403)
T ss_dssp EETTTTCSEEEEEEECSSS---SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHH
T ss_pred ecCCcccCEEEEEEEeCCC---CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHH
Confidence 9999999999999998653 4568999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-h
Q psy12318 245 LMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSIN-S 323 (392)
Q Consensus 245 ~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 323 (392)
....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+. .
T Consensus 256 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~ 335 (403)
T 3p4t_A 256 IAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLI 335 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988766 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHH
Q psy12318 324 KECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 324 ~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~ 387 (392)
..++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..|++.+
T Consensus 336 ~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 336 AEVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 8899999999999999999999999999999999999999999999999999999999999987
No 10
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=6.5e-71 Score=528.01 Aligned_cols=375 Identities=34% Similarity=0.550 Sum_probs=353.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhc
Q psy12318 8 IYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRS 87 (392)
Q Consensus 8 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~ 87 (392)
+|.++++++++++.+++|+.+++.+...+.|+.+.+|. ++|+.|++.||+++.+|++|||.|+++.+...++++++++
T Consensus 13 ~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~ 90 (387)
T 3nf4_A 13 RLLPSQEAAELIELTREIADKVLDPIVDRHEKDETYPE--GVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAAR 90 (387)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCT--THHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCccHHHHhhhCCCCH--HHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHh
Confidence 68899999999999999999999998888898899999 9999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeeeC
Q psy12318 88 SASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWITN 167 (392)
Q Consensus 88 ~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~ 167 (392)
|+++++.+..|. ++...+..+++++|+++|+|++.+|+.++|+++|||++|||+..+.|++++++|||+|||+|.|+||
T Consensus 91 ~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 169 (387)
T 3nf4_A 91 WASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITH 169 (387)
T ss_dssp CHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccC
Confidence 999999988887 7778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHHH
Q psy12318 168 GPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLMS 247 (392)
Q Consensus 168 ~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~~ 247 (392)
+.+||+++|.+++++ +..++++|+||.+.|||++.++|+++|++++++++|.||||+||++++++.++.|+.....
T Consensus 170 ~~~Ad~~~v~a~~~~----~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~ 245 (387)
T 3nf4_A 170 GGKADFYTLFARTGE----GSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFS 245 (387)
T ss_dssp TTTCSEEEEEEECC------CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHH
T ss_pred CcccCEEEEEEEeCC----CCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHH
Confidence 999999999999862 4568999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHH
Q psy12318 248 GLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKECA 327 (392)
Q Consensus 248 ~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (392)
.+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++..+.+.+....++
T Consensus 246 ~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~ 325 (387)
T 3nf4_A 246 ALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQAS 325 (387)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 328 GVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 328 ~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++
T Consensus 326 ~aK~~a~~~a~~~~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 326 IAKLTATDAAMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999998764
No 11
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=7.7e-71 Score=529.67 Aligned_cols=378 Identities=30% Similarity=0.464 Sum_probs=360.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHH
Q psy12318 5 DDTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEEL 84 (392)
Q Consensus 5 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~l 84 (392)
.++++.|+++++++++.+|+|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++
T Consensus 23 ~~~~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 100 (403)
T 3r7k_A 23 VAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPR--DLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAI 100 (403)
T ss_dssp --CGGGGCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCT--HHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCH--HHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHH
Confidence 34678899999999999999999999998888888899999 9999999999999999999999999999999999999
Q ss_pred Hhc-CCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEe
Q psy12318 85 SRS-SASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKF 163 (392)
Q Consensus 85 a~~-~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~ 163 (392)
+++ |+++++.+..+..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|++++++|||+|||+|.
T Consensus 101 a~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 180 (403)
T 3r7k_A 101 LAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKT 180 (403)
T ss_dssp HHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEE
T ss_pred HhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEE
Confidence 998 8998888875544777899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHH
Q psy12318 164 WITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAY 243 (392)
Q Consensus 164 ~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~ 243 (392)
|+||+.+||+++|.++++++ +..++++|+||.+.|||++.++|+++|++++++++|.||||+||++++++.+++|+.
T Consensus 181 ~vs~a~~Ad~~~v~a~~~~~---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 257 (403)
T 3r7k_A 181 FITSGVRADFVTTAVRTGGP---GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFL 257 (403)
T ss_dssp EEETTTTCSEEEEEEECSSS---SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred cccCCccCCEEEEEEEcCCC---CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHH
Confidence 99999999999999998653 456899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCh
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINS 323 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (392)
.....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+..
T Consensus 258 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~ 337 (403)
T 3r7k_A 258 QIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVV 337 (403)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHH
Q psy12318 324 KECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 324 ~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~ 387 (392)
..++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..|+|.+
T Consensus 338 ~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 338 AEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999999999999999999999976
No 12
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-70 Score=526.39 Aligned_cols=382 Identities=33% Similarity=0.542 Sum_probs=362.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHH
Q psy12318 3 KIDDTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAME 82 (392)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~ 82 (392)
.+.+|+|.++++++++++.+|+|+.+.+.+...+.|+.+.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++
T Consensus 11 ~~~~~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 88 (393)
T 1rx0_A 11 SCIDPSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFE 88 (393)
T ss_dssp CTTCTTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCH--HHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred cCCcCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhcCCCCH--HHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 4567889999999999999999999999888888888889999 99999999999999999999999999999999999
Q ss_pred HHHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeE
Q psy12318 83 ELSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNK 162 (392)
Q Consensus 83 ~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k 162 (392)
+++++|+++++.+..|. ++...|..+|+++||++|+|++.+|+.++|+++|||++|||+.++.|+++++++||+|||+|
T Consensus 89 ela~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K 167 (393)
T 1rx0_A 89 ALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSK 167 (393)
T ss_dssp HHHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEE
T ss_pred HHHHhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEE
Confidence 99999999998888887 77788999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccH
Q psy12318 163 FWITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGA 242 (392)
Q Consensus 163 ~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~ 242 (392)
.|+||+.+||+++|.++++++ +.+++++|+||.+.|||++.+.|+++|+++++++.|.||||+||++++++.++.|+
T Consensus 168 ~~is~a~~Ad~~~v~a~~~~~---~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~ 244 (393)
T 1rx0_A 168 AFISGAGESDIYVVMCRTGGP---GPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGF 244 (393)
T ss_dssp EEEETTTTCSEEEEEEESSSS---SGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred EeecCCccCCEEEEEEEcCCC---CCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchH
Confidence 999999999999999997542 45689999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-
Q psy12318 243 YVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSI- 321 (392)
Q Consensus 243 ~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~- 321 (392)
......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++.+++++++++++.+++.++.+.+
T Consensus 245 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~ 324 (393)
T 1rx0_A 245 LIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKD 324 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8888888999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhh
Q psy12318 322 NSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 322 ~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~ 390 (392)
....++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|+|.+|++
T Consensus 325 ~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~ 393 (393)
T 1rx0_A 325 AVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE 393 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhcC
Confidence 466789999999999999999999999999999999999999999999999999999999999999863
No 13
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-70 Score=522.72 Aligned_cols=372 Identities=40% Similarity=0.617 Sum_probs=355.0
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhcC
Q psy12318 9 YDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRSS 88 (392)
Q Consensus 9 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~~ 88 (392)
|.++++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++++|
T Consensus 1 ~~~~~e~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 78 (372)
T 2dvl_A 1 MTLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPW--PQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAAD 78 (372)
T ss_dssp --CCHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCH--HHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHhCchhHHHHHhhCCCCH--HHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999998888888888888889999 99999999999999999999999999999999999999999
Q ss_pred CcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeeeCC
Q psy12318 89 ASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWITNG 168 (392)
Q Consensus 89 ~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~ 168 (392)
+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+..+.|++++++|||+|||+|.|+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 158 (372)
T 2dvl_A 79 PSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSA 158 (372)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred cHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCC
Confidence 99998888884367788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHHHh
Q psy12318 169 PDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLMSG 248 (392)
Q Consensus 169 ~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~ 248 (392)
.+||+++|.+++++ ++++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......
T Consensus 159 ~~Ad~~~v~a~~~~-------g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~ 231 (372)
T 2dvl_A 159 GHAHLYVVMARTEK-------GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAG 231 (372)
T ss_dssp TTCSEEEEEEEETT-------EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHH
T ss_pred CcCCEEEEEEEeCC-------CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHH
Confidence 99999999999752 68999999999999999999999999999999999999999999999999999888889
Q ss_pred hcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHH
Q psy12318 249 LDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKECAG 328 (392)
Q Consensus 249 ~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (392)
+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+....+++
T Consensus 232 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~ 311 (372)
T 2dvl_A 232 LDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASA 311 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988777788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 329 VFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 329 ~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
+|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++
T Consensus 312 aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 312 AKLFASAAAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999874
No 14
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.6e-70 Score=523.35 Aligned_cols=378 Identities=35% Similarity=0.581 Sum_probs=355.8
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHH
Q psy12318 6 DTI-YDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEEL 84 (392)
Q Consensus 6 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~l 84 (392)
.|+ |.|+++++++++.+++|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++
T Consensus 4 ~m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 81 (385)
T 2pg0_A 4 HMTARYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPR--SFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEEL 81 (385)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTSCCH--HHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCCCH--HHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH
Confidence 466 8999999999999999999999998888888889999 9999999999999999999999999999999999999
Q ss_pred HhcC-CcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEe
Q psy12318 85 SRSS-ASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKF 163 (392)
Q Consensus 85 a~~~-~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~ 163 (392)
+++| +++++.+ |..++...|..+++++|+++|+|++.+|+.++|+++|||++|||+..+.|+++++++||+|||+|.
T Consensus 82 a~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 159 (385)
T 2pg0_A 82 EKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKT 159 (385)
T ss_dssp HHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEE
T ss_pred HhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEe
Confidence 9999 8888765 544677889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHH
Q psy12318 164 WITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAY 243 (392)
Q Consensus 164 ~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~ 243 (392)
|+||+.+||+++|.++++++.+++..++++|+||++.|||++.++|+++|++++++++|.||||+||++++++.+++|+.
T Consensus 160 ~~s~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~ 239 (385)
T 2pg0_A 160 FITNGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFY 239 (385)
T ss_dssp EETTTTTCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHH
T ss_pred cccCCcccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHH
Confidence 99999999999999998643101445799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCh
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINS 323 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (392)
.....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++.+++++++++++.+++.++.+.+..
T Consensus 240 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~ 319 (385)
T 2pg0_A 240 YLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIV 319 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999887778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHH
Q psy12318 324 KECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 324 ~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~ 387 (392)
..++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+
T Consensus 320 ~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 320 TEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999999999999999999999975
No 15
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=2.3e-71 Score=532.29 Aligned_cols=378 Identities=30% Similarity=0.511 Sum_probs=355.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
.|+|.++++++++++.+|+|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 14 ~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~ 91 (396)
T 3ii9_A 14 LLDQQLADDERMVRDAAHAYAQGKLAPRVTEAFRHETTDA--AIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVE 91 (396)
T ss_dssp CGGGGSCHHHHHHHHHHHHHCCCCCHHHHHHHHHHTCCCT--HHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCH--HHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999998888888899999 99999999999999999999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeee
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWI 165 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~v 165 (392)
++|+++++.+..|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~v 171 (396)
T 3ii9_A 92 RVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWI 171 (396)
T ss_dssp TTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEE
T ss_pred HhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeE
Confidence 99999999888876566678999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
||+.+||+++|.++++++ +.+++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. ++|+...
T Consensus 172 s~a~~Ad~~~v~a~~~~~---g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~ 247 (396)
T 3ii9_A 172 TNSPIADVFVVWAKLDED---GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGP 247 (396)
T ss_dssp ETGGGCSEEEEEEEEEET---TEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHH
T ss_pred CCCccCCEEEEEEEecCC---CCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHH
Confidence 999999999999998632 445789999999999999999999999999999999999999999999976 7888888
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHH
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKE 325 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
...+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++..+.+.+....
T Consensus 248 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~ 327 (396)
T 3ii9_A 248 FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEI 327 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 326 CAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 326 ~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|+|.+++
T Consensus 328 ~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 328 TSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999987
No 16
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.7e-70 Score=524.90 Aligned_cols=373 Identities=30% Similarity=0.514 Sum_probs=359.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCC-chHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFK-DLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEEL 84 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~l 84 (392)
+|+|.++++++++++.+|+|+.+++.+...+.|+++.+| . ++|+.|++.||+++.+ ++|||.|+++.+...+++++
T Consensus 25 ~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~--~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel 101 (403)
T 3sf6_A 25 GINAVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPAR--ELAVELGELGLLGMHL-KGYGCAGMSAVAYGLACLEL 101 (403)
T ss_dssp TCGGGSCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCHH--HHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhcChhHHHHHhcCCCCHH--HHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHHHHH
Confidence 578999999999999999999999999888888889999 8 9999999999999999 99999999999999999999
Q ss_pred HhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEee
Q psy12318 85 SRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFW 164 (392)
Q Consensus 85 a~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~ 164 (392)
+++|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|
T Consensus 102 a~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 181 (403)
T 3sf6_A 102 EAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMW 181 (403)
T ss_dssp HHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEe
Confidence 99999999988888656778999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHH
Q psy12318 165 ITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYV 244 (392)
Q Consensus 165 vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~ 244 (392)
+||+.+||+++|+++++ .++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. ++|+..
T Consensus 182 is~a~~Ad~~~v~ar~~-------~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~ 253 (403)
T 3sf6_A 182 ITNGSVADVAVVWARTD-------EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGA 253 (403)
T ss_dssp EETGGGCSEEEEEEEET-------TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHH
T ss_pred ecCCcccCEEEEEEEeC-------CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHH
Confidence 99999999999999975 2589999999999999999999999999999999999999999999998 889998
Q ss_pred HHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChH
Q psy12318 245 LMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSK 324 (392)
Q Consensus 245 ~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+...
T Consensus 254 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~ 333 (403)
T 3sf6_A 254 PLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPE 333 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 325 ECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 325 ~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
.++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++
T Consensus 334 ~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 398 (403)
T 3sf6_A 334 QVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTG 398 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999987
No 17
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=2.7e-70 Score=528.24 Aligned_cols=384 Identities=23% Similarity=0.328 Sum_probs=349.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccC------------------CCCchHHHHHHHHhcCCCCCCCCccC
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTN------------------DFKDLRKVWKDFGQLGLLGITVPEEF 67 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~Gl~~~~~p~~~ 67 (392)
.|+|.++++++++++.+|+|+.+++.|...+.++.. .+|. ++|+.|.+.||+++.+|++|
T Consensus 4 ~M~~~~~~~~~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~e~G~~~~~~P~~~ 81 (415)
T 4hr3_A 4 SMDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELD--SLKAKARAAGLWNLFLPDPE 81 (415)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHH--HHHHHHHHTTCSSTTCCCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHH--HHHHHHHhCCCcCcCCCHHH
Confidence 478999999999999999999998887665554322 2455 99999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCcchhHHHh-hhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCC-CCCCcCCc
Q psy12318 68 GGSEMGYLDHVIAMEELSRSSASVGLSFVA-HSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPG-SGSDVISM 145 (392)
Q Consensus 68 GG~~~~~~~~~~~~~~la~~~~s~~~~~~~-~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~-~gsd~~~~ 145 (392)
||.|+++.+...++++|++.|.+..+.... +...+...|..+++++|+++|+|++.+|+.++|+++|||+ +|||+..+
T Consensus 82 GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~ 161 (415)
T 4hr3_A 82 LGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNM 161 (415)
T ss_dssp TSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGC
T ss_pred CCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhC
Confidence 999999999999999999988654332221 2213346889999999999999999999999999999999 99999999
Q ss_pred eeEEEEeCCeEEEeeeEeeeeCCCC--CcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCC--cEE
Q psy12318 146 SLKAEKKGDMYVLNGNKFWITNGPD--ADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSN--TGE 221 (392)
Q Consensus 146 ~~~a~~~~~g~~l~G~k~~vs~~~~--ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~--s~~ 221 (392)
.|+|++++|||+|||+|.|+||+.+ ||+++|+++++++.+ +..++++|+||++.|||++.++|+++|+++++ +++
T Consensus 162 ~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~ 240 (415)
T 4hr3_A 162 AATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAH-RYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGV 240 (415)
T ss_dssp CCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSC-TTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEE
T ss_pred eeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCC-CCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeE
Confidence 9999999999999999999999966 999999999865432 45689999999999999999999999999987 999
Q ss_pred EEEcceeeCCCCcccCCCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHH
Q psy12318 222 LIFENCQVPAENLLGGENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVA 301 (392)
Q Consensus 222 v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~ 301 (392)
|.||||+||++++++.+++|+......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..+
T Consensus 241 v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~ 320 (415)
T 4hr3_A 241 VSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIA 320 (415)
T ss_dssp EEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHH
T ss_pred EEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC--CCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHH
Q psy12318 302 LSASRAYLYSVAKACDR--GSINSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVR 379 (392)
Q Consensus 302 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~ 379 (392)
+++++++++.+++.++. +.+....++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|+++++
T Consensus 321 ~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~ 400 (415)
T 4hr3_A 321 INQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVH 400 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHH
Confidence 99999999999999987 4456778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcC
Q psy12318 380 RIVIGRSINAEYK 392 (392)
Q Consensus 380 ~~~l~~~~l~~~~ 392 (392)
+..|++.+|++|+
T Consensus 401 ~~~ia~~~l~~~~ 413 (415)
T 4hr3_A 401 RGVVARIELAKYA 413 (415)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999885
No 18
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=6.4e-70 Score=522.84 Aligned_cols=374 Identities=28% Similarity=0.468 Sum_probs=359.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
+|+|.++++++++++.+|+|+.+++.+...+.|+++.+|. ++|+.|++.||+++.+ ++|||.|+++.+...++++++
T Consensus 21 ~m~~~l~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~ 97 (399)
T 3swo_A 21 DTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPS--ELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACMELE 97 (399)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCT--THHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhhCCCCH--HHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHH
Confidence 4678899999999999999999989998888888889999 9999999999999999 999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeee
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWI 165 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~v 165 (392)
++|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~v 177 (399)
T 3swo_A 98 AGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWI 177 (399)
T ss_dssp HHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred HhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeE
Confidence 99999988888886577889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
||+.+||+++|.++++ .++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. ++|+...
T Consensus 178 s~a~~Ad~~~v~a~~~-------~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~ 249 (399)
T 3swo_A 178 TNGNLADVATVWAQTD-------DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAP 249 (399)
T ss_dssp ETTTTCSEEEEEEBCT-------TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHH
T ss_pred CCCCccCEEEEEEEeC-------CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHH
Confidence 9999999999999874 2489999999999999999999999999999999999999999999998 8899988
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHH
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKE 325 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
...+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+....
T Consensus 250 ~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~ 329 (399)
T 3swo_A 250 LSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQ 329 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhh
Q psy12318 326 CAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 326 ~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~ 390 (392)
++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|++.+++.
T Consensus 330 ~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~ 394 (399)
T 3swo_A 330 ISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGK 394 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999873
No 19
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-69 Score=519.05 Aligned_cols=376 Identities=28% Similarity=0.444 Sum_probs=354.5
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHH
Q psy12318 5 DDTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEEL 84 (392)
Q Consensus 5 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~l 84 (392)
..|+|.++++++++++.+++|+.+++.+...+.|+.+.+|. ++|+.|.+.||+++.+|++|||.|+++.+...+++++
T Consensus 5 ~~~~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 82 (385)
T 2eba_A 5 YALEDLLTPEEKEVQKAARRFLEKEALPHIRDWWEEGVFPT--HLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYEL 82 (385)
T ss_dssp TCGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCG--GGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHhCCccHHHHHHhCCCCH--HHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHH
Confidence 34678999999999999999999999988888888889999 9999999999999999999999999999999999999
Q ss_pred HhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCc-CCceeEEEEeCCeEEEeeeEe
Q psy12318 85 SRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDV-ISMSLKAEKKGDMYVLNGNKF 163 (392)
Q Consensus 85 a~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~-~~~~~~a~~~~~g~~l~G~k~ 163 (392)
+++|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+ .++.|++++++|||+|||+|.
T Consensus 83 a~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~ 162 (385)
T 2eba_A 83 ERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKM 162 (385)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEE
T ss_pred HHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeee
Confidence 9999999998888865667788999999999999999999999999999999999999 999999999999999999999
Q ss_pred eeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHH
Q psy12318 164 WITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAY 243 (392)
Q Consensus 164 ~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~ 243 (392)
|+||+.+||+++|.++++ + + + +++|+||.+.|||++.+.|+++|++++++++|.||||+||+++++ .+++|+.
T Consensus 163 ~~s~~~~Ad~~~v~a~~~-~---g-~-~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~ 235 (385)
T 2eba_A 163 WITNGNLAHLAVIWAKDE-G---G-E-VLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLK 235 (385)
T ss_dssp EEETTTTCSEEEEEEECC---------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTH
T ss_pred ccCCCcccCEEEEEEEeC-C---C-c-EEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHH
Confidence 999999999999999974 1 3 3 889999999999999999999999999999999999999999999 6788888
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCh
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINS 323 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (392)
.....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+.+..
T Consensus 236 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~ 315 (385)
T 2eba_A 236 APLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTP 315 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 324 KECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 324 ~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
..++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..+++.+++
T Consensus 316 ~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 316 AQVSLAKRQNVWKALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 788999999999999999999999999999999999999999999999999999999999999976
No 20
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=4.2e-70 Score=524.14 Aligned_cols=375 Identities=37% Similarity=0.653 Sum_probs=358.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCC-chHHHHHHHHhcCCCCCCCCccCCCCCC--CHHHHHHHHHH
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFK-DLRKVWKDFGQLGLLGITVPEEFGGSEM--GYLDHVIAMEE 83 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gl~~~~~p~~~GG~~~--~~~~~~~~~~~ 83 (392)
|+|.++++++++++.+|+|+.+.+.+...+.|+.+.+| . ++|+.|.+.||+++.+|++|||.|+ ++.+...++++
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~ee 78 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYE--EAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEE 78 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTCCCTT--TTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHHhcCCCCHH--HHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999988889889999 9 9999999999999999999999999 99999999999
Q ss_pred HHhcCCcchhHHHhhhhhHHH-HHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeE
Q psy12318 84 LSRSSASVGLSFVAHSNLCVN-QINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNK 162 (392)
Q Consensus 84 la~~~~s~~~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k 162 (392)
++++|+++++.+.+|. ++.. .+..+++++|+++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|
T Consensus 79 la~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K 157 (397)
T 3mpi_A 79 IARGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSK 157 (397)
T ss_dssp HHHHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEE
T ss_pred HHhhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEE
Confidence 9999999999988886 6666 8999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEE-eCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCcc
Q psy12318 163 FWITNGPDADIAVVYARTNPNADKKQHGISTFIV-EKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKG 241 (392)
Q Consensus 163 ~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV-~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g 241 (392)
.|+||+.+||+++|.++++++. +..++++|+| |.+.|||++ ++|+++|++++++++|.||||+||++++++.++.|
T Consensus 158 ~~~s~~~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g 234 (397)
T 3mpi_A 158 TWISNAAQADVLIYYAYTDKAA--GSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDG 234 (397)
T ss_dssp EEEETTTTCSSEEEEEESCGGG--GGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCH
T ss_pred EeeCCCcccCEEEEEEEcCCCC--CCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCch
Confidence 9999999999999999986532 4567999999 999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-C
Q psy12318 242 AYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRG-S 320 (392)
Q Consensus 242 ~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~-~ 320 (392)
+......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+ .
T Consensus 235 ~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~ 314 (397)
T 3mpi_A 235 ARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRL 314 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987 5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHH-HHH
Q psy12318 321 INSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIG-RSI 387 (392)
Q Consensus 321 ~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~-~~~ 387 (392)
+....++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|+ |.+
T Consensus 315 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 315 NNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 6778899999999999999999999999999999999999999999999999999999999999 766
No 21
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=3.4e-69 Score=521.59 Aligned_cols=374 Identities=28% Similarity=0.437 Sum_probs=353.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
++|.|+++++++++.+|+|+.+++.+...+.++.+.+|. ++|+.|.+.||+++.+| +|||.|+++.+...+++++++
T Consensus 51 ~~~~l~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~p~--~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~ 127 (436)
T 2ix5_A 51 FNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPF--HITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIAR 127 (436)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCG--GGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHhhCChhhHHHHhcCCCCH--HHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHh
Confidence 456899999999999999999999888777677788999 99999999999999999 999999999999999999999
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeee
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWIT 166 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs 166 (392)
+|+++++.+.+|..++...|..+|+++||++|+|++.+|+.++|+++|||++|||+.++.|++++++|||+|||+|.|+|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is 207 (436)
T 2ix5_A 128 VDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIG 207 (436)
T ss_dssp HCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCC
Confidence 99999887777765677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHH
Q psy12318 167 NGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLM 246 (392)
Q Consensus 167 ~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~ 246 (392)
|+.+||+++|.++++++ .++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.+ .++....
T Consensus 208 ~a~~Ad~~lv~Ar~~~~-----~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~ 281 (436)
T 2ix5_A 208 NSTFADLLIIFARNTTT-----NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTS 281 (436)
T ss_dssp TTTTCSEEEEEEEETTT-----SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHH
T ss_pred CCcccCEEEEEEEECCC-----CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHH
Confidence 99999999999998532 36899999999999999999999999999999999999999999999875 5788888
Q ss_pred HhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q psy12318 247 SGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKEC 326 (392)
Q Consensus 247 ~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (392)
..+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++.+++++++++++++++.++.+.+....+
T Consensus 282 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~a 361 (436)
T 2ix5_A 282 KVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQA 361 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999877667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 327 AGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 327 ~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
+++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..+++.+++
T Consensus 362 s~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llg 424 (436)
T 2ix5_A 362 SLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTG 424 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999976
No 22
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.7e-68 Score=507.16 Aligned_cols=360 Identities=26% Similarity=0.343 Sum_probs=333.3
Q ss_pred HHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhcCCcchhHHHhhh
Q psy12318 20 ETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRSSASVGLSFVAHS 99 (392)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~~~s~~~~~~~~~ 99 (392)
+.+|+|+.+++.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++++|+++++.+.+|.
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~ 79 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPR--DLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQG 79 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCH--HHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 45788999999888888888889999 9999999999999999999999999999999999999999999999888875
Q ss_pred hhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeeeCCCCCcEEEEEEE
Q psy12318 100 NLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWITNGPDADIAVVYAR 179 (392)
Q Consensus 100 ~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~ad~~lv~a~ 179 (392)
.++...|. +|+++|+++|+|++.+|+ ++|+++|||++|||+.++.|++++++|||+|||+|.|+||+.+||+++|.++
T Consensus 80 ~~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~ 157 (366)
T 1r2j_A 80 MAAWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGL 157 (366)
T ss_dssp HHHHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEB
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEE
Confidence 46677888 999999999999999999 9999999999999999999999999999999999999999999999999998
Q ss_pred eCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH-HHhhcHHHHHHhH
Q psy12318 180 TNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL-MSGLDLERLVISA 258 (392)
Q Consensus 180 ~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~-~~~~~~~r~~~~a 258 (392)
+++ + ++++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.+++|+... ...+...|+.+++
T Consensus 158 ~~~----~--g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa 231 (366)
T 1r2j_A 158 QED----G--SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAW 231 (366)
T ss_dssp CSS----S--CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHH
T ss_pred eCC----C--ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHH
Confidence 742 1 68999999999999999999999999999999999999999999999988888877 7888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CCChHHHHHHHHHHHHHH
Q psy12318 259 GPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRG-SINSKECAGVFLVAAENA 337 (392)
Q Consensus 259 ~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~~~~a 337 (392)
.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..++++++++++.+++.++.+ .+....++++|+++++.+
T Consensus 232 ~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a 311 (366)
T 1r2j_A 232 GCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERA 311 (366)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999886 566778999999999999
Q ss_pred HHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 338 VKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 338 ~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
.++++.++|++||.||++++|++|+|||++...+++|++++++..+++.+++
T Consensus 312 ~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 312 AAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp HHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999876
No 23
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=7.3e-68 Score=528.22 Aligned_cols=376 Identities=32% Similarity=0.517 Sum_probs=347.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccC-CCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDSTN-DFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
++..|+++++++++.+|+|+.+++.|...+.++.+ .+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 29 ~p~~lt~eq~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~--~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~ 106 (597)
T 3owa_A 29 TPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSV--RLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFS 106 (597)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHTGGGHHHHTTTCHHHHH--HHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHG
T ss_pred CccCCCHHHHHHHHHHHHHHHHhCchhHHHHHhcCCcCCH--HHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHH
Confidence 45578999999999999999999998877777654 5777 99999999999999999999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe--CCeEEEeeeEe
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK--GDMYVLNGNKF 163 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~--~~g~~l~G~k~ 163 (392)
+++++ +..+..|..++...+..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|+|+++ +++|+|||+|.
T Consensus 107 ~~~~~-~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~ 185 (597)
T 3owa_A 107 RAGGF-AITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQ 185 (597)
T ss_dssp GGTHH-HHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEE
T ss_pred ccchH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEE
Confidence 98744 4445555545556788999999999999999999999999999999999999999999985 45699999999
Q ss_pred eeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHH
Q psy12318 164 WITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAY 243 (392)
Q Consensus 164 ~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~ 243 (392)
|+||+.+||+++|++++++ .++++|+||++.|||++.+.|+++|++++++++|.|+||+||.++++|.+++|+.
T Consensus 186 ~is~a~~Ad~~lV~Art~~------~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~ 259 (597)
T 3owa_A 186 WITNSAFADVFIVYAKIDG------EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHI 259 (597)
T ss_dssp EEETTTTCSEEEEEEEETT------TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred EeCCCccCCEEEEEEEeCC------CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHH
Confidence 9999999999999999853 3689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGS--- 320 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~--- 320 (392)
.....++.+|+.+++.++|+++++++.+++|+++|.|||+|+.++|.+|++|+++..++++++++++++++.+|.+.
T Consensus 260 ~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~ 339 (597)
T 3owa_A 260 IAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTL 339 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887642
Q ss_pred ----------------CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHH
Q psy12318 321 ----------------INSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIG 384 (392)
Q Consensus 321 ----------------~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~ 384 (392)
+....++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia 419 (597)
T 3owa_A 340 SEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVP 419 (597)
T ss_dssp CHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHH
T ss_pred cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHH
Confidence 2245688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhc
Q psy12318 385 RSINAEY 391 (392)
Q Consensus 385 ~~~l~~~ 391 (392)
+.+++++
T Consensus 420 ~~ll~~~ 426 (597)
T 3owa_A 420 GTFLRKA 426 (597)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 24
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=1.9e-67 Score=504.74 Aligned_cols=374 Identities=29% Similarity=0.480 Sum_probs=352.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
.|+|.++++++++++.+++|+.+++.+...+.++.+.+|. ++|+.|++.||+++.+ ++|||.|+++.+...++++++
T Consensus 9 ~m~~~~~~e~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~ 85 (392)
T 1siq_A 9 VLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHR--EIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLARELE 85 (392)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCCT--HHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhcCcchHHHHhhCCCCH--HHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHH
Confidence 3678899999999999999999899888777788888999 9999999999999999 999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe--CCeEEEeeeEe
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK--GDMYVLNGNKF 163 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~--~~g~~l~G~k~ 163 (392)
+.|+++++.+..|..++...+..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|+|+++ ++||+|||+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~ 165 (392)
T 1siq_A 86 RVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKT 165 (392)
T ss_dssp TTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEE
T ss_pred HhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEE
Confidence 9999988877777545677888999999999999999999999999999999999999999999999 99999999999
Q ss_pred eeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHH
Q psy12318 164 WITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAY 243 (392)
Q Consensus 164 ~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~ 243 (392)
|+||+.+||+++|.+++++ .++++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.. .|+.
T Consensus 166 ~vs~~~~Ad~~~v~a~~~~------g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~ 238 (392)
T 1siq_A 166 WITNSPMADLFVVWARCED------GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLG 238 (392)
T ss_dssp EEETGGGCSEEEEEEEETT------SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSH
T ss_pred eecCCcccCEEEEEEEECC------CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHH
Confidence 9999999999999999852 24789999999999999999999999999999999999999999999875 5777
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCh
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINS 323 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (392)
.....+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++.+++++++++++.+++.++.+.+..
T Consensus 239 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~ 318 (392)
T 1siq_A 239 GPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAP 318 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 77778888999999999999999999999999999999999999999999999999999999999999999999877677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhh
Q psy12318 324 KECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINA 389 (392)
Q Consensus 324 ~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~ 389 (392)
..++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|++++++..+++.+++
T Consensus 319 ~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 319 EMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 788999999999999999999999999999999999999999999999999999999999999976
No 25
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-66 Score=519.34 Aligned_cols=373 Identities=32% Similarity=0.552 Sum_probs=346.7
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCchhhhhcc-cCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhc
Q psy12318 9 YDLTEEQNKLRETVASYCKTHITPIAADIDS-TNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRS 87 (392)
Q Consensus 9 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~ 87 (392)
..++++++++++.+++|+.+++.+...+.+. ...+|. ++|+.|++.||+++.+|++|||.|+++.+...+++++ ..
T Consensus 26 ~~~~~e~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~--~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~ 102 (577)
T 2z1q_A 26 EDFDESVKEIARTTRTFVEREVLPLLERMEHGELELNV--PLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SG 102 (577)
T ss_dssp GGCCHHHHHHHHHHHHHHHTTTHHHHHHHHTTCGGGHH--HHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TT
T ss_pred CCCCHHHHHHHHHHHHHHhccCchhHHhhhcccCCCCH--HHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hh
Confidence 4679999999999999999888877544443 236788 9999999999999999999999999999999999999 78
Q ss_pred CCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe--CCeEEEeeeEeee
Q psy12318 88 SASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK--GDMYVLNGNKFWI 165 (392)
Q Consensus 88 ~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~--~~g~~l~G~k~~v 165 (392)
|+++++.+..|..++..+|..+|+++||++|+|++.+|+.++|+++|||++|||+.++.|+|+++ +++|+|||+|.|+
T Consensus 103 ~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~i 182 (577)
T 2z1q_A 103 SGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWI 182 (577)
T ss_dssp SCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEE
T ss_pred cccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCC
Confidence 99999888888656667899999999999999999999999999999999999999999999984 5579999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHH
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVL 245 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~ 245 (392)
||+..||+++|++++++ .++++|+||++.|||++.+.|+++|+++++++.|.|+||+||.++++|.+++|+...
T Consensus 183 t~a~~Ad~~~V~Ar~~g------~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~ 256 (577)
T 2z1q_A 183 SNAGFAHLFTVFAKVDG------EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIA 256 (577)
T ss_dssp ETTTTCSEEEEEEEETT------TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHH
T ss_pred CCCCccCEEEEEEEeCC------CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHH
Confidence 99999999999999752 578999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC------
Q psy12318 246 MSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRG------ 319 (392)
Q Consensus 246 ~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~------ 319 (392)
...+..+|+.+++.++|+++++++.+++|+++|.|||+|+.++|.+|++|+++.+.+++++++++.+++.+|.+
T Consensus 257 ~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~ 336 (577)
T 2z1q_A 257 FNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKG 336 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred --------CCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhh
Q psy12318 320 --------SINSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 320 --------~~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~ 390 (392)
.+....++++|+++++.+.++++.++|+|||.||++++|++|+|||++...+++|++++++..+++.++++
T Consensus 337 ~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~ 415 (577)
T 2z1q_A 337 PEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRR 415 (577)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC
T ss_pred chhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHH
Confidence 23456788999999999999999999999999999999999999999999999999999999999988865
No 26
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=4.9e-67 Score=508.96 Aligned_cols=380 Identities=23% Similarity=0.346 Sum_probs=347.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhcc----cC-CCC--chHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHH
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDS----TN-DFK--DLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVI 79 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~--~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~ 79 (392)
|+|.|+++++++++.+|+|+++++.|...+.++ .. .|| . ++|+.|.+.||+++.+|++|||.|+++.+...
T Consensus 3 m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~ 80 (438)
T 3mkh_A 3 IDFHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQ--PTYAAAVSAGILKGQISPAHGGTGGTLIESAI 80 (438)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTH--HHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcH--HHHHHHHhCCCCCCCCCcccCCCCCCHHHHHH
Confidence 689999999999999999999999887655542 22 455 5 99999999999999999999999999999999
Q ss_pred HHHHHHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcC--CeeEEEeecCCCCCC-----CcCCceeEEEEe
Q psy12318 80 AMEELSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSG--EKIGCLAMSEPGSGS-----DVISMSLKAEKK 152 (392)
Q Consensus 80 ~~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g--~~~~~~a~te~~~gs-----d~~~~~~~a~~~ 152 (392)
++++|++.|+++++.+..+. ++...+..+|+++ +++|++++.+| +.++|+++|||++|| |+.++.|+|+++
T Consensus 81 v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~ 158 (438)
T 3mkh_A 81 LVEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE 158 (438)
T ss_dssp HHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE
T ss_pred HHHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe
Confidence 99999999999998877765 6667788899999 99999999996 589999999999998 688999999999
Q ss_pred CCeEEEeeeEeeeeCCC-----CCcEEEEEEEeCC----CCCCCCCceEEEEEeCCC-----CC-ccccccccccCCCCC
Q psy12318 153 GDMYVLNGNKFWITNGP-----DADIAVVYARTNP----NADKKQHGISTFIVEKGT-----PG-FSKGKKLNKLGMRGS 217 (392)
Q Consensus 153 ~~g~~l~G~k~~vs~~~-----~ad~~lv~a~~~~----~~~~~~~~~~~~lV~~~~-----~G-v~~~~~~~~~G~~~~ 217 (392)
++||+|||+|.|+||+. .||+++|.+++.+ +++++..++++|+||++. || |++.+.|+++|++++
T Consensus 159 g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~ 238 (438)
T 3mkh_A 159 GDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSV 238 (438)
T ss_dssp TTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTC
T ss_pred CCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCC
Confidence 99999999999999997 8999999999853 111234689999999875 88 999999999999999
Q ss_pred CcEEEEEcceeeCCCCcccCCCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcC-CCCccchhHHHHHH
Q psy12318 218 NTGELIFENCQVPAENLLGGENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFG-TRIGEFQLMQGKIA 296 (392)
Q Consensus 218 ~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g-~~l~~~~~v~~~la 296 (392)
++++|.||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|++|| +|+.++|.+|++|+
T Consensus 239 ~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la 318 (438)
T 3mkh_A 239 SGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLS 318 (438)
T ss_dssp CCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHH
T ss_pred CceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCccc
Q psy12318 297 DMHVALSASRAYLYSVAKACDRGSIN----SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIG 372 (392)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~ 372 (392)
++.+++++++++++++++.++.+.+. ...++++|+++++.+.++++.++|++||.||++++|++|+|||++...++
T Consensus 319 ~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~ 398 (438)
T 3mkh_A 319 GVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIF 398 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeee
Confidence 99999999999999999999987542 22367899999999999999999999999999999999999999999999
Q ss_pred CChH-HHHHHHHHHHHhhh
Q psy12318 373 AGTS-EVRRIVIGRSINAE 390 (392)
Q Consensus 373 ~g~~-~~~~~~l~~~~l~~ 390 (392)
+|++ ++++.++++.++++
T Consensus 399 ~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 399 DGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp SSCTTTTHHHHHHHHHHST
T ss_pred cCChHHHHHHHHHHHHHhc
Confidence 9998 99999999999986
No 27
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-66 Score=502.42 Aligned_cols=385 Identities=22% Similarity=0.336 Sum_probs=338.5
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhhccCchhh---hhccc-----CCCC---chHHHHHHHHhcCCCCCCCCccCCCCCC
Q psy12318 4 IDDTIYDLTEEQNKLRETVASYCKTHITPIAA---DIDST-----NDFK---DLRKVWKDFGQLGLLGITVPEEFGGSEM 72 (392)
Q Consensus 4 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~---~~~~~~~~l~~~Gl~~~~~p~~~GG~~~ 72 (392)
...|+|.++++++++++.+|+|+.+++.|... +.++. ..++ ..+++|+.|.+.||+++.+|+ |.|+
T Consensus 16 ~~~m~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~---G~g~ 92 (428)
T 2wbi_A 16 TTGQLFVQTRKGQEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA---VSGL 92 (428)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH---HHCC
T ss_pred CccCCCCCCHHHHHHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC---CCCC
Confidence 45688999999999999999999998877554 44422 2332 124999999999999999999 8899
Q ss_pred CHHHHHHHHHHHHhcCCc-chhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCC-CCCCcCCceeEEE
Q psy12318 73 GYLDHVIAMEELSRSSAS-VGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPG-SGSDVISMSLKAE 150 (392)
Q Consensus 73 ~~~~~~~~~~~la~~~~s-~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~-~gsd~~~~~~~a~ 150 (392)
++.+...++++++++|.+ .++....+..++...|..+|+++|+++|+|++.+|+.++|+++|||+ +|||+.++.|+|+
T Consensus 93 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~ 172 (428)
T 2wbi_A 93 SHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQ 172 (428)
T ss_dssp CHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEE
T ss_pred CHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEE
Confidence 999999999999999853 23322222224567888999999999999999999999999999999 9999999999999
Q ss_pred EeCCeEEEeeeEeeeeCCCC--CcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCC---cEEEEEc
Q psy12318 151 KKGDMYVLNGNKFWITNGPD--ADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSN---TGELIFE 225 (392)
Q Consensus 151 ~~~~g~~l~G~k~~vs~~~~--ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~---s~~v~f~ 225 (392)
+++|||+|||+|.|+||+.+ ||+++|.++++++.+++..++++|+||.+.|||++.++|+++|+++++ +++|.||
T Consensus 173 ~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 252 (428)
T 2wbi_A 173 RDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFN 252 (428)
T ss_dssp EETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEE
T ss_pred EeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeC
Confidence 99999999999999999988 999999999864321244578999999999999999999999999995 9999999
Q ss_pred ceeeCCCCcccCCCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHH
Q psy12318 226 NCQVPAENLLGGENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSAS 305 (392)
Q Consensus 226 ~v~Vp~~~~l~~~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~ 305 (392)
||+||++++++.++.|+......+...|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|+++..+++++
T Consensus 253 dv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aa 332 (428)
T 2wbi_A 253 QVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKI 332 (428)
T ss_dssp EEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHH
T ss_pred ceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-C-CCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHH
Q psy12318 306 RAYLYSVAKACDR-G-SINSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVI 383 (392)
Q Consensus 306 ~~~~~~~~~~~~~-~-~~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l 383 (392)
+++++.+++.++. + .+....++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..|
T Consensus 333 r~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~i 412 (428)
T 2wbi_A 333 RLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAI 412 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHH
Confidence 9999999999886 2 3456788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q psy12318 384 GRSINAEY 391 (392)
Q Consensus 384 ~~~~l~~~ 391 (392)
++.+|+.|
T Consensus 413 a~~~l~~~ 420 (428)
T 2wbi_A 413 ATMELRDQ 420 (428)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.6e-65 Score=498.22 Aligned_cols=380 Identities=21% Similarity=0.337 Sum_probs=346.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccCchhhhhccc----CCCC--chHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHH
Q psy12318 7 TIYDLTEEQNKLRETVASYCKTHITPIAADIDST----NDFK--DLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIA 80 (392)
Q Consensus 7 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~ 80 (392)
|+|.+++++.++++.+|+|+++++.+...+.++. +.+| . ++|+.|++.||+++.+|++|||.|+++.+...+
T Consensus 2 M~~~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v 79 (439)
T 2c12_A 2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATR--PFYREAVRHGLIKAQVPIPLGGTMESLVHESII 79 (439)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTH--HHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCCChH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHH
Confidence 6799999999999999999999998876665543 3455 5 999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHh--cCCeeEEEeecCCCCCC-----CcCCceeEEEEeC
Q psy12318 81 MEELSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALC--SGEKIGCLAMSEPGSGS-----DVISMSLKAEKKG 153 (392)
Q Consensus 81 ~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~--~g~~~~~~a~te~~~gs-----d~~~~~~~a~~~~ 153 (392)
++++++.|+++++.+..|. ++...+..+|+++|+++|+|++. +|+.++|+++|||++|| |+.++.|++++++
T Consensus 80 ~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~ 158 (439)
T 2c12_A 80 LEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVG 158 (439)
T ss_dssp HHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEET
T ss_pred HHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcC
Confidence 9999999999999888876 66778899999999999999999 69999999999999987 5788899999999
Q ss_pred CeEEEeeeEeeeeCCC-----CCcEEEEEEEe-C----CCC--CCCCCceEEEEEeCCCC------CccccccccccCCC
Q psy12318 154 DMYVLNGNKFWITNGP-----DADIAVVYART-N----PNA--DKKQHGISTFIVEKGTP------GFSKGKKLNKLGMR 215 (392)
Q Consensus 154 ~g~~l~G~k~~vs~~~-----~ad~~lv~a~~-~----~~~--~~~~~~~~~~lV~~~~~------Gv~~~~~~~~~G~~ 215 (392)
+||+|||+|.|+||+. +||+++|.+++ + ++. .++..++++|+||.+.| ||++.++|+++|++
T Consensus 159 ~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r 238 (439)
T 2c12_A 159 NEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHI 238 (439)
T ss_dssp TEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCT
T ss_pred CEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccC
Confidence 9999999999999997 99999999998 5 220 01446799999999998 77799999999999
Q ss_pred CCCcEEEEEcceeeCCCCcccCCCccHH-HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHh-hhhcCCCCccchhHHH
Q psy12318 216 GSNTGELIFENCQVPAENLLGGENKGAY-VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHE-RVQFGTRIGEFQLMQG 293 (392)
Q Consensus 216 ~~~s~~v~f~~v~Vp~~~~l~~~~~g~~-~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~-r~~~g~~l~~~~~v~~ 293 (392)
++++++|.||||+||++++|+.++.|+. .....+...|+.+++.++|+++++++.+++|+++ |.+||+|+.++|.+|+
T Consensus 239 ~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~ 318 (439)
T 2c12_A 239 TTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVAD 318 (439)
T ss_dssp TCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHH
T ss_pred CCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHH
Confidence 9999999999999999999999888988 8888899999999999999999999999999996 7889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccC
Q psy12318 294 KIADMHVALSASRAYLYSVAKACDRGSIN----SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLY 369 (392)
Q Consensus 294 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~ 369 (392)
+|+++.+++++++++++.+++.++.+.+. ...++++|+++++.+.++++.++|++||.||++++|++|+|||++..
T Consensus 319 ~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~ 398 (439)
T 2c12_A 319 KLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCY 398 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcc
Confidence 99999999999999999999999876542 23578999999999999999999999999999999999999999999
Q ss_pred cccCChH-HHHHHHHHHHHhh
Q psy12318 370 EIGAGTS-EVRRIVIGRSINA 389 (392)
Q Consensus 370 ~~~~g~~-~~~~~~l~~~~l~ 389 (392)
.+++|++ ++++..+++.+..
T Consensus 399 ~i~~G~~~~~~~~~i~~~l~~ 419 (439)
T 2c12_A 399 PLFDGGNIGLRRRQMQRVMAL 419 (439)
T ss_dssp TTSSSCTTTTHHHHHHHHHTS
T ss_pred eeecCChHHHHHHHHHHHHhc
Confidence 9999987 7999999887654
No 29
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=1.8e-64 Score=505.28 Aligned_cols=375 Identities=33% Similarity=0.516 Sum_probs=343.8
Q ss_pred CCCCHHHHH----HHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHH
Q psy12318 9 YDLTEEQNK----LRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEEL 84 (392)
Q Consensus 9 ~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~l 84 (392)
..+++++++ +++.+++|+.+.+.+. ..|+...+|. ++|+.|++.||+++.+|++|||.|++..+...+++++
T Consensus 44 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~--~~d~~~~~p~--~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l 119 (607)
T 2uxw_A 44 SVLNEEQTQFLKELVEPVSRFFEEVNDPA--KNDALEMVEE--TTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIV 119 (607)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTCCHH--HHHHHTSCCH--HHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhcCHH--HhccccCCCH--HHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHH
Confidence 456777754 8899999998887553 3466678998 9999999999999999999999999999999999999
Q ss_pred HhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeC--CeEEEeeeE
Q psy12318 85 SRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKG--DMYVLNGNK 162 (392)
Q Consensus 85 a~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~--~g~~l~G~k 162 (392)
+++|+++++.+..|..++...|..+|+++||++|+|++.+|+.++|+++|||++|||+..+.|+|++++ ++|+|||+|
T Consensus 120 ~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K 199 (607)
T 2uxw_A 120 GMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSK 199 (607)
T ss_dssp HHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEE
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEE
Confidence 999999998888875455688999999999999999999999999999999999999999999999973 479999999
Q ss_pred eeeeCCCCCcEEEEEEEeCCCC---CCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCCC
Q psy12318 163 FWITNGPDADIAVVYARTNPNA---DKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGEN 239 (392)
Q Consensus 163 ~~vs~~~~ad~~lv~a~~~~~~---~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~ 239 (392)
.|+||+..||+++|++++++.+ +++.+++++|+||++.|||++.+.|+++|+++++++.|.|+||+||.++++|.++
T Consensus 200 ~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g 279 (607)
T 2uxw_A 200 LWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVG 279 (607)
T ss_dssp EEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTT
T ss_pred EeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCC
Confidence 9999999999999999985321 1114689999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q psy12318 240 KGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRG 319 (392)
Q Consensus 240 ~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~ 319 (392)
+|+..+...++.+|+.+++.++|+++++++.+++|+++|+|||+|++++|.+|++|+++.+.+++++++++.+++.+|.+
T Consensus 280 ~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~ 359 (607)
T 2uxw_A 280 SGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG 359 (607)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C-CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHH
Q psy12318 320 S-INSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 320 ~-~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~ 387 (392)
. +....++++|+++++.+.++++.++|++||.||+++++++|+|||++...+++|++++++..++...
T Consensus 360 ~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~g 428 (607)
T 2uxw_A 360 ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQG 428 (607)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHHHHH
Confidence 3 3567889999999999999999999999999999999999999999999999999999998885443
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=1e-62 Score=472.92 Aligned_cols=369 Identities=23% Similarity=0.292 Sum_probs=329.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCC-CCHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSE-MGYLDHVIAMEEL 84 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~-~~~~~~~~~~~~l 84 (392)
++.+.|+++++++++.+|+|+. .+.+.+.+.|+++.+|. ++|+.|.+.||+++.+|++|||.| .++.+...+++++
T Consensus 4 ~~~~~lt~e~~~~~~~~r~~~~-~~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel 80 (395)
T 3mxl_A 4 DLRAPLTPAGRTVVDLLAGVIP-RISAEAADRDRTGTFPV--EAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRL 80 (395)
T ss_dssp SSSSCCSHHHHHHHHHHTTTHH-HHHHHHHHHHHHTCCCH--HHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHH-HHhhchHHHhhhCCCCH--HHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHH
Confidence 4667899999999999999985 57888888999999999 999999999999999999999999 9999999999999
Q ss_pred HhcCCcchhHHHhhhhhHHHHH--HhcCCHHHH---HHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEe
Q psy12318 85 SRSSASVGLSFVAHSNLCVNQI--NRHATKQQK---EKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLN 159 (392)
Q Consensus 85 a~~~~s~~~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~ 159 (392)
+++|+++++.+.+|......++ ..+|+++|| ++|+|++.+|+.++|+++|||++|+ ..+.+ +++|||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t---~~~~g~~ln 155 (395)
T 3mxl_A 81 AEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHS---DGAGGWLLS 155 (395)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEE---CSSSCEEEE
T ss_pred HhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEE---ecCCEEEEe
Confidence 9999999998888864444443 356999999 9999999999999999999998652 22222 378899999
Q ss_pred eeEeeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCccc--C
Q psy12318 160 GNKFWITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLG--G 237 (392)
Q Consensus 160 G~k~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~--~ 237 (392)
|+|.|+||+.+||+++|.+++++++ +.+++++|+||++.|||++.+.|+++|++++++++|.||||+||++++++ .
T Consensus 156 G~K~~is~a~~Ad~~~v~a~~~~~~--~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~ 233 (395)
T 3mxl_A 156 GRKVLVSMAPIATHFFVHAQRRDDD--GSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGP 233 (395)
T ss_dssp EEEEEETTGGGCSEECCCEEEECTT--SCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEE
T ss_pred eEEEEecCccccCEEEEEEEeCCCC--CCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCC
Confidence 9999999999999999999987543 45688999999999999999999999999999999999999999999998 6
Q ss_pred CCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12318 238 ENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACD 317 (392)
Q Consensus 238 ~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~ 317 (392)
++.++..........|+.+++.++|+++++++.+++|++ ++|+.++|.+|++|+++..++++++++++.+++..+
T Consensus 234 ~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d 308 (395)
T 3mxl_A 234 VGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNAD 308 (395)
T ss_dssp SSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 666665555445668999999999999999999999998 457899999999999999999999999999999887
Q ss_pred C------CCCC------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCc-ccCChHHHHHHHHH
Q psy12318 318 R------GSIN------SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYE-IGAGTSEVRRIVIG 384 (392)
Q Consensus 318 ~------~~~~------~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~l~ 384 (392)
. ..+. ...++++|+++++.+.++++.++|++||.||++++|++|+|||++... +|+|++++++..++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia 388 (395)
T 3mxl_A 309 AASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLS 388 (395)
T ss_dssp HHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHH
T ss_pred hcccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHH
Confidence 5 1111 245678899999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHhh
Q psy12318 385 RSINA 389 (392)
Q Consensus 385 ~~~l~ 389 (392)
+.+|+
T Consensus 389 ~~~Lg 393 (395)
T 3mxl_A 389 GQALG 393 (395)
T ss_dssp HHHSC
T ss_pred HHHhC
Confidence 99985
No 31
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=1.2e-61 Score=471.18 Aligned_cols=371 Identities=21% Similarity=0.292 Sum_probs=326.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCC-CCHHHHHHHHHH
Q psy12318 5 DDTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSE-MGYLDHVIAMEE 83 (392)
Q Consensus 5 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~-~~~~~~~~~~~~ 83 (392)
..|+|.++++++++++.+++|+. .+.+.+.+.|+++.+|. ++|+.|++.||+++.+|++|||.| .++.++..++++
T Consensus 14 ~~m~~~lt~e~~~l~~~~r~~~~-~~~~~a~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~ee 90 (439)
T 3m9v_A 14 TGLYAPVTPAGRVLLDRLAAHLP-RIRSTAAEHDRDGTFPT--DTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLA 90 (439)
T ss_dssp STTSSCSSHHHHHHHHHHHTTHH-HHHHHHHHHHHHTCCCH--HHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH-HHhhhHHHHHhcCCCCH--HHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHH
Confidence 46899999999999999999985 67788888899999999 999999999999999999999999 899999999999
Q ss_pred HHhcCCcchhHHHhhhhhHHHH--HHhcCCHHH---HHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEE
Q psy12318 84 LSRSSASVGLSFVAHSNLCVNQ--INRHATKQQ---KEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVL 158 (392)
Q Consensus 84 la~~~~s~~~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l 158 (392)
+++.|+++++.+.+|......+ +..+|+++| |++|++++.+|+.++|+++|||+++ ...+.+ .++|||+|
T Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t---~~~~g~vl 165 (439)
T 3m9v_A 91 VARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRP---DGAGGWLL 165 (439)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEE---CSSSCEEE
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceee---ccCCEEEE
Confidence 9999999999888875444433 346799999 9999999999999999999999853 333332 27889999
Q ss_pred eeeEeeeeCCCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCccc--
Q psy12318 159 NGNKFWITNGPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLG-- 236 (392)
Q Consensus 159 ~G~k~~vs~~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~-- 236 (392)
||+|+|+||+.+||+++|.++++++. +..++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++
T Consensus 166 nG~K~~~s~a~~Ad~~~v~art~~~~--~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~ 243 (439)
T 3m9v_A 166 SGRKTLVSMAPVGTHFVINARTDGTD--GPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRD 243 (439)
T ss_dssp EEEEEEETTGGGCSEEEECEEECC----CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECC
T ss_pred EeEEEeecCccccCEEEEEEEecCCC--CCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCC
Confidence 99999999999999999999987643 45679999999999999999999999999999999999999999999998
Q ss_pred CCCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12318 237 GENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKAC 316 (392)
Q Consensus 237 ~~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~ 316 (392)
.++.|+.........+|+.+++.++|+++++++.+++|++ ++++.++|.+|++|+++.+++++++++++.+++..
T Consensus 244 ~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~ 318 (439)
T 3m9v_A 244 PVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPEPPQAAALTLVAEIDSRLYALRATAGSALTAA 318 (439)
T ss_dssp C--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666654444445568899999999999999999999998 45789999999999999999999999999988777
Q ss_pred hCC------------CCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCc-ccCChHHHHHHHH
Q psy12318 317 DRG------------SINSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYE-IGAGTSEVRRIVI 383 (392)
Q Consensus 317 ~~~------------~~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~l 383 (392)
+.. ......++++|+++++.+.++++.++|++||.||++++|++|+|||++... +|+|++.++++.+
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i 398 (439)
T 3m9v_A 319 DALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFL 398 (439)
T ss_dssp HHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHH
T ss_pred HhhccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHH
Confidence 641 012235678899999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhhh
Q psy12318 384 GRSINAE 390 (392)
Q Consensus 384 ~~~~l~~ 390 (392)
++.+|+.
T Consensus 399 ~~~~lg~ 405 (439)
T 3m9v_A 399 SAQALGI 405 (439)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 9999874
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=2.7e-62 Score=472.30 Aligned_cols=364 Identities=16% Similarity=0.144 Sum_probs=322.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHH
Q psy12318 6 DTIYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELS 85 (392)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la 85 (392)
-.+|.++++++++++.+++|+.+ +.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++
T Consensus 13 ~~~~~~~~~~~~l~~~~r~~~~~-~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela 89 (414)
T 2or0_A 13 GRENLYFQGMGRVLDRIEVVAEE-IRGQAVQSEADCRLTD--AAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVA 89 (414)
T ss_dssp ----------CHHHHHHHHTHHH-HHHHHHHHHHHTSCCH--HHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHH
T ss_pred cccCCCCccHHHHHHHHHHHHHH-HHHhHHHHHhcCCCCH--HHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHH
Confidence 35789999999999999999865 7787778888889999 99999999999999999999999999999999999999
Q ss_pred hcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeee
Q psy12318 86 RSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWI 165 (392)
Q Consensus 86 ~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~v 165 (392)
+.|+++++.+..|. ++...+..+|+++|+++|+| +|+.++|+++| | .|++++++|||+|||+|.|+
T Consensus 90 ~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~i 155 (414)
T 2or0_A 90 ALDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFS 155 (414)
T ss_dssp HHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEE
T ss_pred hhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEecc
Confidence 99999998888876 77888999999999999999 69999999887 4 57899999999999999999
Q ss_pred eCCCCCcEEEEEEEeCCCCCCCCC---ceEEEEEeCCCCCcccc-ccccccCCCCCCcEEEEEcceeeCCCCcccC----
Q psy12318 166 TNGPDADIAVVYARTNPNADKKQH---GISTFIVEKGTPGFSKG-KKLNKLGMRGSNTGELIFENCQVPAENLLGG---- 237 (392)
Q Consensus 166 s~~~~ad~~lv~a~~~~~~~~~~~---~~~~~lV~~~~~Gv~~~-~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~---- 237 (392)
||+.+||+++|.+++++++ +.. ++++|+||++ ||++. ++|+++|++++++++|.||||+||++++++.
T Consensus 156 s~a~~Ad~~~v~a~~~~~~--g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~ 231 (414)
T 2or0_A 156 SGTDHCQWAFLGAMVGDGE--GGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVM 231 (414)
T ss_dssp TTGGGCSEEEEEEEECC-------CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHH
T ss_pred CCCchhhEEEEEEEecCCC--CCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeecccccc
Confidence 9999999999999986432 333 7899999997 89999 8999999999999999999999999999975
Q ss_pred ----CC----ccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhc-CCCCccchhHHHHHHHHHHHHHHHHHH
Q psy12318 238 ----EN----KGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQF-GTRIGEFQLMQGKIADMHVALSASRAY 308 (392)
Q Consensus 238 ----~~----~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~-g~~l~~~~~v~~~la~~~~~~~~~~~~ 308 (392)
++ .|+.+....+...|+.+++.++|+++++++.+++|+++|++| |+|+.++|.+|++|+++.+++++++++
T Consensus 232 ~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l 311 (414)
T 2or0_A 232 DGRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVS 311 (414)
T ss_dssp HSHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 11 234455566788999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhh----CCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCC-hHHHH
Q psy12318 309 LYSVAKACD----RGSIN----SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAG-TSEVR 379 (392)
Q Consensus 309 ~~~~~~~~~----~~~~~----~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g-~~~~~ 379 (392)
++.+++.++ .+.+. ...++++|+++++.+.++++.++|++||.||++++|++|+|||++...+++| +++++
T Consensus 312 ~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~ 391 (414)
T 2or0_A 312 LIETADRFYDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPT 391 (414)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHH
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHH
Confidence 999999998 65442 3468899999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhh
Q psy12318 380 RIVIGRSINAE 390 (392)
Q Consensus 380 ~~~l~~~~l~~ 390 (392)
+..+++.+|+.
T Consensus 392 ~~~ia~~~lg~ 402 (414)
T 2or0_A 392 NHASALTQLGG 402 (414)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhCC
Confidence 99999999863
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=2.8e-60 Score=455.71 Aligned_cols=354 Identities=16% Similarity=0.195 Sum_probs=321.1
Q ss_pred HHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhcCCcchhHH
Q psy12318 16 NKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRSSASVGLSF 95 (392)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~~~s~~~~~ 95 (392)
.++++.+++|+. .+.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++|++.|+++++.+
T Consensus 10 ~~l~~~~~~~~~-~~~~~~~~~d~~~~~p~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~ 86 (394)
T 2rfq_A 10 HEVMQRLDALLP-TLRERAQETEDLRRIPD--DSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVS 86 (394)
T ss_dssp SHHHHHHHHHHH-HHHHTHHHHHHHTSCCH--HHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhHHHHHhcCCCCH--HHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHH
Confidence 368999999985 47777778888889999 999999999999999999999999999999999999999999999888
Q ss_pred HhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeeeCCCCCcEEE
Q psy12318 96 VAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWITNGPDADIAV 175 (392)
Q Consensus 96 ~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~ad~~l 175 (392)
..|. ++...+..+|+++|+++|++ +|+.++|+++| | .|++++++|||+|||+|.|+||+.+||+++
T Consensus 87 ~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~ 152 (394)
T 2rfq_A 87 SIIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAV 152 (394)
T ss_dssp HHHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEE
T ss_pred HHHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEE
Confidence 8776 77788999999999999998 68989999987 3 578999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccC--------CC----ccHH
Q psy12318 176 VYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGG--------EN----KGAY 243 (392)
Q Consensus 176 v~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~--------~~----~g~~ 243 (392)
|.+++++++ ..+++++|+||.+ ||++.+.|+++|++++++++|.||||+||++++++. ++ .|+.
T Consensus 153 v~a~~~~~g--~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~ 228 (394)
T 2rfq_A 153 LGGPVIKDG--RPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPV 228 (394)
T ss_dssp EEEEEEETT--EEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGG
T ss_pred EeeeecCCC--CCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCcc
Confidence 999984221 2347899999997 899999999999999999999999999999999975 22 2344
Q ss_pred HHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhh---hcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Q psy12318 244 VLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERV---QFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACD--- 317 (392)
Q Consensus 244 ~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~---~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~--- 317 (392)
+....+...|+.+++.++|+++++++.+++|+++|+ +||+|+.++|.+|++|+++..++++++++++.+++.++
T Consensus 229 ~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~ 308 (394)
T 2rfq_A 229 YKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALL 308 (394)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555667889999999999999999999999999999 99999999999999999999999999999999999998
Q ss_pred -CCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCC-hHHHHHHHHHHHHhhh
Q psy12318 318 -RGSIN----SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAG-TSEVRRIVIGRSINAE 390 (392)
Q Consensus 318 -~~~~~----~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g-~~~~~~~~l~~~~l~~ 390 (392)
.+.+. ...++++|+++++.+.++++.++|++||.||++++|++|+|||++...+|+| ++++++..+++.+++.
T Consensus 309 ~~g~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~ 387 (394)
T 2rfq_A 309 VAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGL 387 (394)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTC
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCC
Confidence 65442 3468899999999999999999999999999999999999999999999999 9999999999999863
No 34
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=1.3e-60 Score=461.53 Aligned_cols=360 Identities=18% Similarity=0.173 Sum_probs=326.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhc
Q psy12318 8 IYDLTEEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRS 87 (392)
Q Consensus 8 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~ 87 (392)
.+.+++ .++++.+++|+. .+.+...+.|+++.+|. ++|+.|.+.||+++.+|++|||.|+++.+...++++++++
T Consensus 32 ~~~~~~--~~l~~~~r~~~~-~~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~ 106 (422)
T 2jbr_A 32 TPDVSG--VSMLEKIQQILP-QIAKNAESAEQLRRVPD--ENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGA 106 (422)
T ss_dssp CCCCSS--CCHHHHHHHHHH-HHHHTHHHHHHHTSCCH--HHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCH--HHHHHHHHHHHH-HHHHhhHHHHHcCCCCH--HHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhh
Confidence 344444 478999999986 57777778888889999 9999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEeCCeEEEeeeEeeeeC
Q psy12318 88 SASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKKGDMYVLNGNKFWITN 167 (392)
Q Consensus 88 ~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~~~g~~l~G~k~~vs~ 167 (392)
|+++++.+..|. ++...+..+|+++|+++|++. |+.++|+++| | .|++++++|||+|||+|.|+||
T Consensus 107 ~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~ 172 (422)
T 2jbr_A 107 CAGTAWAFSLLC-THSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSG 172 (422)
T ss_dssp CHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETT
T ss_pred CcCHHHHHHHHH-HHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecC
Confidence 999998877775 777889999999999999986 8889999987 3 5689999999999999999999
Q ss_pred CCCCcEEEEEEEeCCCCCCCCCceEEEEEeCCCCCccccccccccCCCCCCcEEEEEcceeeCCCCcccCC--------C
Q psy12318 168 GPDADIAVVYARTNPNADKKQHGISTFIVEKGTPGFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGE--------N 239 (392)
Q Consensus 168 ~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~--------~ 239 (392)
+.+||+++|.+++++++ +.+++++|+||++ ||++.+.|+++|++++++++|.||||+||++++++.+ +
T Consensus 173 a~~Ad~~~v~a~~~~~~--g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g 248 (422)
T 2jbr_A 173 CDHAEYAIVGFNRFDAD--GNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAG 248 (422)
T ss_dssp GGGCSEEEEEEEEECTT--SCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTT
T ss_pred CccccEEEEEEEecCCC--CCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCc
Confidence 99999999999986432 4568999999997 8999999999999999999999999999999999864 4
Q ss_pred cc-----HHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhh--hcCCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy12318 240 KG-----AYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERV--QFGTRIGEFQLMQGKIADMHVALSASRAYLYSV 312 (392)
Q Consensus 240 ~g-----~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~--~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~ 312 (392)
.| +.+....+...|+.+++.++|+++++++.+++|+++|+ +||+|+.++|.+|++|+++.+++++++++++.+
T Consensus 249 ~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~a 328 (422)
T 2jbr_A 249 FGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKT 328 (422)
T ss_dssp TTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 44556677889999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHhh----CCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChH-HHHHHHH
Q psy12318 313 AKACD----RGSIN----SKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTS-EVRRIVI 383 (392)
Q Consensus 313 ~~~~~----~~~~~----~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~l 383 (392)
++.++ .+.+. ...++++|+++++.+.++++.++|++||.||+++++++|+|||++...+|+|++ ++++..+
T Consensus 329 a~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~i 408 (422)
T 2jbr_A 329 WEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQIL 408 (422)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHH
Confidence 99998 55442 346889999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHhhh
Q psy12318 384 GRSINAE 390 (392)
Q Consensus 384 ~~~~l~~ 390 (392)
++.+++.
T Consensus 409 a~~~lg~ 415 (422)
T 2jbr_A 409 GRELMGM 415 (422)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 9999863
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=1.9e-54 Score=437.08 Aligned_cols=366 Identities=19% Similarity=0.215 Sum_probs=315.2
Q ss_pred HHHHHHHHHHHHHHhhccCchhhhhcccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHhcCCcch
Q psy12318 13 EEQNKLRETVASYCKTHITPIAADIDSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSRSSASVG 92 (392)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~~~~s~~ 92 (392)
+++.++++.+++|+.+.... ....+....+++ +.|+.|++.|++.. +|+++| .+..+...+.+++ +.+++
T Consensus 29 ~e~~~lr~~vr~~l~~~~~~-~~~~~~~~~~~~--~~~~~l~~~g~l~~-~p~e~G---~~~~~~~~v~e~~---~~~~~ 98 (659)
T 1w07_A 29 RHAFEVSDRIARLVASDPVF-EKSNRARLSRKE--LFKSTLRKCAHAFK-RIIELR---LNEEEAGRLRHFI---DQPAY 98 (659)
T ss_dssp HHHHHHHHHHHHHHHTCGGG-CCTTTTSSCHHH--HHHHHHHHHHHHHH-HHHHTT---CCHHHHHHHHHHH---CCCCH
T ss_pred hHHHHHHHHHHHHHhcCccc-ccCCccCCChHH--HHHHHHHHHHHHHH-hHHHhC---CCchHHHHHHHHh---ccchh
Confidence 78899999999999765221 111112235566 99999999888874 788887 3566766665554 44544
Q ss_pred hHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe--CCeEEEe-----eeEeee
Q psy12318 93 LSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK--GDMYVLN-----GNKFWI 165 (392)
Q Consensus 93 ~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~--~~g~~l~-----G~k~~v 165 (392)
+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+.++.|+|+++ ++||+|| |.|+|+
T Consensus 99 --~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~i 176 (659)
T 1w07_A 99 --VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWP 176 (659)
T ss_dssp --HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECC
T ss_pred --hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEee
Confidence 5667547778999999999999999999999999999999999999999999999998 6899999 999999
Q ss_pred eC-CCCCcEEEEEEEeCCCCCCCCCceEEEEEeC-C------CCCccccccccccC---CCCCCcEEEEEcceeeCCCCc
Q psy12318 166 TN-GPDADIAVVYARTNPNADKKQHGISTFIVEK-G------TPGFSKGKKLNKLG---MRGSNTGELIFENCQVPAENL 234 (392)
Q Consensus 166 s~-~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~-~------~~Gv~~~~~~~~~G---~~~~~s~~v~f~~v~Vp~~~~ 234 (392)
|| +.+||+++|+|++++++ +..++++|+||. + .|||++.+.|+++| +++++++.|.||||+||.+++
T Consensus 177 s~~a~~Ad~~lV~Ar~~~~~--~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~l 254 (659)
T 1w07_A 177 GGLGKVSTHAVVYARLITNG--KDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQM 254 (659)
T ss_dssp TTTTTTCSEEEEEEEEEETT--EEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGB
T ss_pred cCCCCCCCEEEEEEEECCCC--CCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHh
Confidence 99 79999999999986432 445889999995 4 69999999999999 999999999999999999999
Q ss_pred ccC------CCccH------HHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCC-------CCccchhHHHHH
Q psy12318 235 LGG------ENKGA------YVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGT-------RIGEFQLMQGKI 295 (392)
Q Consensus 235 l~~------~~~g~------~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~-------~l~~~~~v~~~l 295 (392)
|+. ++.++ ......+..+|+.+++.++|+++++++.+++|++.|+|||. |+.++|.+|++|
T Consensus 255 Lg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rL 334 (659)
T 1w07_A 255 LMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRL 334 (659)
T ss_dssp CCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHH
T ss_pred cCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHH
Confidence 985 45443 24456678999999999999999999999999999999998 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-------CCCC-----ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHH
Q psy12318 296 ADMHVALSASRAYLYSVAKACD-------RGSI-----NSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYL 363 (392)
Q Consensus 296 a~~~~~~~~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~ 363 (392)
+++.+++++++.+.+.+++.++ .+.+ ....++++|+++++.+.++++.++|+|||.||+.+++++|+|
T Consensus 335 a~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~ 414 (659)
T 1w07_A 335 FPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELF 414 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHH
Confidence 9999999999999999887653 3332 245788999999999999999999999999999999999999
Q ss_pred HhhccCcccCChHHHHHHHHHHHHhhhcC
Q psy12318 364 RDAKLYEIGAGTSEVRRIVIGRSINAEYK 392 (392)
Q Consensus 364 rd~~~~~~~~g~~~~~~~~l~~~~l~~~~ 392 (392)
||++...+++|++++++..+++.+++.|+
T Consensus 415 rda~~~~~~eG~~~v~~~~iar~lL~~~~ 443 (659)
T 1w07_A 415 AVYVPACTYEGDNVVLQLQVARFLMKTVA 443 (659)
T ss_dssp HHHGGGGTTTSCHHHHHHHHHHHHHHHHT
T ss_pred HhcceeEEEeCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998753
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=1.1e-53 Score=421.09 Aligned_cols=328 Identities=21% Similarity=0.288 Sum_probs=296.1
Q ss_pred hHHHHHHHHhcCCCCCCC--CccCCCCCCCHHHHHHHHHHHHhcCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHh
Q psy12318 46 LRKVWKDFGQLGLLGITV--PEEFGGSEMGYLDHVIAMEELSRSSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALC 123 (392)
Q Consensus 46 ~~~~~~~l~~~Gl~~~~~--p~~~GG~~~~~~~~~~~~~~la~~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~ 123 (392)
.+++++.+.+.||+++.+ |++|||...... ....++..+........++. .+...|..++ ++|+++|+|++.
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~----~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~ 161 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFVARAA----RFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLL 161 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHHHHHH----HHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHT
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHHHHHH----HHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHh
Confidence 579999999999999999 689996443333 33333444555455555666 5667788888 999999999999
Q ss_pred cCCe-------------eEEEeecCCCCCCCcCCceeEEEEe-CCeEEEeeeEeeeeCCCCCcEEEEEEEeCCCCCCCCC
Q psy12318 124 SGEK-------------IGCLAMSEPGSGSDVISMSLKAEKK-GDMYVLNGNKFWITNGPDADIAVVYARTNPNADKKQH 189 (392)
Q Consensus 124 ~g~~-------------~~~~a~te~~~gsd~~~~~~~a~~~-~~g~~l~G~k~~vs~~~~ad~~lv~a~~~~~~~~~~~ 189 (392)
+|+. ++|+++|||++|||+.++.|+|+++ +|+|+|||+|+|+| +.+||+++|+++++ .
T Consensus 162 sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~-------~ 233 (541)
T 3djl_A 162 SDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA-------G 233 (541)
T ss_dssp CSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET-------T
T ss_pred CCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC-------C
Confidence 9998 7899999999999999999999999 78999999999999 89999999999984 4
Q ss_pred ceEEEEEeCCCC-----CccccccccccCCCCCCcEEEEEcceeeCCCCcccCCCccHHHHHHhhcHHHHHHhHHHHHHH
Q psy12318 190 GISTFIVEKGTP-----GFSKGKKLNKLGMRGSNTGELIFENCQVPAENLLGGENKGAYVLMSGLDLERLVISAGPVGIM 264 (392)
Q Consensus 190 ~~~~~lV~~~~~-----Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~r~~~~a~~~G~a 264 (392)
++++|+||++.| ||++.+.|+++|++++++++|.|+||+ ++++|.+++|+.++...+...|+.+++.++|++
T Consensus 234 Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a 310 (541)
T 3djl_A 234 GLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMM 310 (541)
T ss_dssp EEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999988 999999999999999999999999995 889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC------hHHHHHHHHHHHHHHH
Q psy12318 265 QACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSIN------SKECAGVFLVAAENAV 338 (392)
Q Consensus 265 ~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~k~~~~~~a~ 338 (392)
+++++.+++|+++|.+||+|+.++|.+|++|+++.+++++++++++++++.++...+. ...++++|+++++.+.
T Consensus 311 ~~al~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~ 390 (541)
T 3djl_A 311 RRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGM 390 (541)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986432 3457799999999999
Q ss_pred HHHHHHHHHhcCCcccCCChHHHHHHhhccCcccCChHHHHHHHHHHHHhhh
Q psy12318 339 KVALEAIQCLGGNGYINDYPTGRYLRDAKLYEIGAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 339 ~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~l~~~~l~~ 390 (392)
++++.+++++||.||.++++++|+|||++..+|++|++++++..++|.+++.
T Consensus 391 ~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 391 PFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQ 442 (541)
T ss_dssp HHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999998763
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=1.6e-50 Score=407.69 Aligned_cols=364 Identities=19% Similarity=0.218 Sum_probs=294.4
Q ss_pred CHHHHHHHHHHHHHHhhccCchhhh--h---cccCCCCchHHHHHHHHhcCCCCCCCCccCCCCCCCHHHHHHHHHHHHh
Q psy12318 12 TEEQNKLRETVASYCKTHITPIAAD--I---DSTNDFKDLRKVWKDFGQLGLLGITVPEEFGGSEMGYLDHVIAMEELSR 86 (392)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~Gl~~~~~p~~~GG~~~~~~~~~~~~~~la~ 86 (392)
+++..++++.+++++... |.-.. . ..+..+....+..+.|.+. + +++||.+ ..+.. +++++..
T Consensus 26 ~~~~~~~r~~~~~~l~~~--p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~-~------~~~~~~~--~~~~~-~~~~~~~ 93 (661)
T 2ddh_A 26 SPENTRRRREIENLILND--PDFQHEDYNFLTRSQRYEVAVKKSATMVKK-M------REYGISD--PEEIM-WFKNSVH 93 (661)
T ss_dssp SHHHHHHHHHHHHHHHTC--GGGCCSCGGGSCHHHHHHHHHHHHHHHHHH-H------HHTTCCC--HHHHH-HHHHHHH
T ss_pred ChhHHHHHHHHHHHHhcC--cccccCCcCCCCHHHHHHHHHHHHHHHHHH-H------HHcCCCC--chHHH-HHHHHhc
Confidence 456678899999998654 21110 0 0000011001223334333 2 5677765 33332 3666655
Q ss_pred cCCcchhHHHhhhhhHHHHHHhcCCHHHHHHhhhHHhcCCeeEEEeecCCCCCCCcCCceeEEEEe--CCeEEEe-----
Q psy12318 87 SSASVGLSFVAHSNLCVNQINRHATKQQKEKYLPALCSGEKIGCLAMSEPGSGSDVISMSLKAEKK--GDMYVLN----- 159 (392)
Q Consensus 87 ~~~s~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~gsd~~~~~~~a~~~--~~g~~l~----- 159 (392)
.+. +..+.+|..+++..|..+|+++|+++|+|++.+|+.++|+++|||++|||+.+++|+|+++ ++||+||
T Consensus 94 ~~~--~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~ 171 (661)
T 2ddh_A 94 RGH--PEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVT 171 (661)
T ss_dssp TTC--CCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSST
T ss_pred cch--hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCC
Confidence 433 3445567557788999999999999999999999999999999999999999999999999 7899999
Q ss_pred eeEeeeeC-CCCCcEEEEEEEeCCCCCCCCCceEEEEEeC-C------CCCccccccccccCCCCCCcEEEEEcceeeCC
Q psy12318 160 GNKFWITN-GPDADIAVVYARTNPNADKKQHGISTFIVEK-G------TPGFSKGKKLNKLGMRGSNTGELIFENCQVPA 231 (392)
Q Consensus 160 G~k~~vs~-~~~ad~~lv~a~~~~~~~~~~~~~~~~lV~~-~------~~Gv~~~~~~~~~G~~~~~s~~v~f~~v~Vp~ 231 (392)
|.|+|+|| +.+||+++|+|++.+++ +..++.+|+||. + .|||++.+.|+++|+++++++.|.||||+||.
T Consensus 172 G~K~wis~~a~~Ad~~vV~Ar~~~~~--~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~ 249 (661)
T 2ddh_A 172 SIKWWPGGLGKTSNHAIVLAQLITQG--ECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPR 249 (661)
T ss_dssp TSEECCTTTTTTCSEEEEEEEEEETT--EEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEG
T ss_pred eEEEecCCCcccCCEEEEEEEEccCC--CCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECH
Confidence 99999999 78999999999986432 456899999994 4 79999999999999999999999999999999
Q ss_pred CCcccCC------Ccc-----HHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCC-------CCccchhHHH
Q psy12318 232 ENLLGGE------NKG-----AYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGT-------RIGEFQLMQG 293 (392)
Q Consensus 232 ~~~l~~~------~~g-----~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~-------~l~~~~~v~~ 293 (392)
+++|+.. +.+ +......+..+|+.+++.++|+++++++.+++|++.|+|||. |+.++|.+|+
T Consensus 250 ~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~ 329 (661)
T 2ddh_A 250 ENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQY 329 (661)
T ss_dssp GGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHH
T ss_pred HHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHH
Confidence 9999874 322 456667778999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC-------CCC-----ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHH
Q psy12318 294 KIADMHVALSASRAYLYSVAKACDR-------GSI-----NSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGR 361 (392)
Q Consensus 294 ~la~~~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r 361 (392)
+|+++.+++++++.+++.+++.++. +.+ ....++++|.++++.+.++++.++++|||.||+.+++++|
T Consensus 330 rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r 409 (661)
T 2ddh_A 330 KLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPN 409 (661)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCcHHH
Confidence 9999999999999999999988863 222 2456789999999999999999999999999999999999
Q ss_pred HHHhhccCcccCChHHHHHHHHHHHHhhhc
Q psy12318 362 YLRDAKLYEIGAGTSEVRRIVIGRSINAEY 391 (392)
Q Consensus 362 ~~rd~~~~~~~~g~~~~~~~~l~~~~l~~~ 391 (392)
+|||++...+++|++++++.++++.+++.|
T Consensus 410 ~~rda~~~~~~eG~~~vl~~~iar~lL~~~ 439 (661)
T 2ddh_A 410 IYVTFTPACTFEGENTVMMLQTARFLMKIY 439 (661)
T ss_dssp HHHHHGGGGTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHhcceeeEecCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2e-39 Score=315.76 Aligned_cols=254 Identities=14% Similarity=0.111 Sum_probs=207.2
Q ss_pred HHHHhcCC--HHHHHHhhhHHhcCCeeEEEeecCCCCC--------CCc-CCceeEEEEeCCeEEEeeeEeeeeCCCCCc
Q psy12318 104 NQINRHAT--KQQKEKYLPALCSGEKIGCLAMSEPGSG--------SDV-ISMSLKAEKKGDMYVLNGNKFWITNGPDAD 172 (392)
Q Consensus 104 ~~l~~~g~--~~~~~~~l~~~~~g~~~~~~a~te~~~g--------sd~-~~~~~~a~~~~~g~~l~G~k~~vs~~~~ad 172 (392)
..+..+|+ ++|+++|||++++|+.++|+++|||+.+ ||+ ..++ ++++++|||+|||.|+|+||++.||
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred hHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 34568999 9999999999999999999999999864 664 3344 7889999999999999999999999
Q ss_pred EEEEEEEeCCCCCCCCCceEEEEEeCCCCCcccc---ccccc----------cCC-CC-CCcEEEEEcceeeCCCCcc--
Q psy12318 173 IAVVYARTNPNADKKQHGISTFIVEKGTPGFSKG---KKLNK----------LGM-RG-SNTGELIFENCQVPAENLL-- 235 (392)
Q Consensus 173 ~~lv~a~~~~~~~~~~~~~~~~lV~~~~~Gv~~~---~~~~~----------~G~-~~-~~s~~v~f~~v~Vp~~~~l-- 235 (392)
+++|++++++..+ ...+.++|+||.+.|||++. +.+.. +|+ +. ..++.|.||||+||++++|
T Consensus 197 ~~iV~art~~~~~-~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~ 275 (490)
T 1u8v_A 197 EHIIMPTIAMTEA-DKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLC 275 (490)
T ss_dssp EEEECCSSCCCGG-GGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEE
T ss_pred EEEEEEecCCCCC-CCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCC
Confidence 9999999753211 22457899999999999994 34443 666 64 5678899999999999998
Q ss_pred cCCCccHHHHHHhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12318 236 GGENKGAYVLMSGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKA 315 (392)
Q Consensus 236 ~~~~~g~~~~~~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~ 315 (392)
|.++.++......+.+.|+.++++++|.++.++..+...... +| +.++|.+|++|+++.+.+++++++++.+++.
T Consensus 276 g~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~ 350 (490)
T 1u8v_A 276 QEYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASHVKDKLIEMTHLNETLYCCGIACSAE 350 (490)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 666777777677777888887776666666666665543322 33 8999999999999999999999999999999
Q ss_pred hhC---CC--CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhh
Q psy12318 316 CDR---GS--INSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDA 366 (392)
Q Consensus 316 ~~~---~~--~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~ 366 (392)
++. +. +....++++|+++++.+.++++.++|++||.+++ .|.+|.|||.
T Consensus 351 ~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 351 GYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp CEECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred ccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 874 32 3466899999999999999999999999999998 5555666555
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=6.1e-39 Score=312.03 Aligned_cols=265 Identities=17% Similarity=0.163 Sum_probs=220.1
Q ss_pred CHHHHHHhhhHHhcCCeeEEEeecCCCCC--------CCcCCceeEEE-EeCCeEEEeeeEeeeeCCCCCcEEEEEEEeC
Q psy12318 111 TKQQKEKYLPALCSGEKIGCLAMSEPGSG--------SDVISMSLKAE-KKGDMYVLNGNKFWITNGPDADIAVVYARTN 181 (392)
Q Consensus 111 ~~~~~~~~l~~~~~g~~~~~~a~te~~~g--------sd~~~~~~~a~-~~~~g~~l~G~k~~vs~~~~ad~~lv~a~~~ 181 (392)
.++|+++|||++++|+.++|+++|||+.| ||+. +.++++ +++|||+|||.|+|+|| +.||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 36999999999999999999999999976 5654 556654 78999999999999999 9999999999986
Q ss_pred CCCCCCCCceEEEEEeCCCCCcccc--cccc--------ccCCCC-CCcEEEEEcceeeCCCCcc--cCCCccHHHH--H
Q psy12318 182 PNADKKQHGISTFIVEKGTPGFSKG--KKLN--------KLGMRG-SNTGELIFENCQVPAENLL--GGENKGAYVL--M 246 (392)
Q Consensus 182 ~~~~~~~~~~~~~lV~~~~~Gv~~~--~~~~--------~~G~~~-~~s~~v~f~~v~Vp~~~~l--~~~~~g~~~~--~ 246 (392)
+..+ ...++++|+||.+.|||++. +.+. ++|++. ..++.|.||||+||++++| |.++.++... .
T Consensus 200 ~~~~-~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~ 278 (481)
T 2yyk_A 200 LQAG-SEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGAT 278 (481)
T ss_dssp CCTT-CGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHH
T ss_pred CCCC-CCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHh
Confidence 4221 23468999999999999994 3343 256664 6778999999999999998 5555555443 5
Q ss_pred HhhcHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CC--C
Q psy12318 247 SGLDLERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDR---GS--I 321 (392)
Q Consensus 247 ~~~~~~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~---~~--~ 321 (392)
..+..+|+..++..+|.++.++..+..++.. +| +.++|.+|++|+++.+++++++++++.+++..+. +. +
T Consensus 279 ~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~ 353 (481)
T 2yyk_A 279 GALNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVP 353 (481)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEEC
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCc
Confidence 6778999999999999999999999888764 33 8999999999999999999999999999999974 32 4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHHHHHhhcc-------CcccCChHHHHHHHHHHHH
Q psy12318 322 NSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGRYLRDAKL-------YEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 322 ~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r~~rd~~~-------~~~~~g~~~~~~~~l~~~~ 387 (392)
....++++|+++++.+.++++.++|++||.++. .|+++.| |.+. +... |++.+++..|+|.+
T Consensus 354 ~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~-g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 354 DRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGA-ALEAKERVALFRLA 422 (481)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBT-TBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 466899999999999999999999999998877 8888888 8843 3333 88888888888654
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=8.7e-34 Score=275.31 Aligned_cols=263 Identities=15% Similarity=0.114 Sum_probs=198.2
Q ss_pred HHHHHHhhhHHhcCCeeEEEeecCCCC--------CCCcCCceeEEEEeCCeEEEeeeEeeeeCCCCCcEEEEEEEeCCC
Q psy12318 112 KQQKEKYLPALCSGEKIGCLAMSEPGS--------GSDVISMSLKAEKKGDMYVLNGNKFWITNGPDADIAVVYARTNPN 183 (392)
Q Consensus 112 ~~~~~~~l~~~~~g~~~~~~a~te~~~--------gsd~~~~~~~a~~~~~g~~l~G~k~~vs~~~~ad~~lv~a~~~~~ 183 (392)
.+|+++|||++++|+.++++++|||++ |||+ .+.+ +.+++|||+|||.|.|+||+..||+++|++++++.
T Consensus 132 ~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a~t~~~ 209 (515)
T 3hwc_A 132 TQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGCLYRPG 209 (515)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEEEecCC
Confidence 678899999999999999999999986 4677 4443 34568999999999999999999999999987332
Q ss_pred CCCCCCceEEEEEeCCCCCccccccccccCC-----CC-----CCcEEEEEcceeeCCCCcc--cCCCccHHHHHHhhcH
Q psy12318 184 ADKKQHGISTFIVEKGTPGFSKGKKLNKLGM-----RG-----SNTGELIFENCQVPAENLL--GGENKGAYVLMSGLDL 251 (392)
Q Consensus 184 ~~~~~~~~~~~lV~~~~~Gv~~~~~~~~~G~-----~~-----~~s~~v~f~~v~Vp~~~~l--~~~~~g~~~~~~~~~~ 251 (392)
.+ +.. +++|+||.+.|||++.+.|..+|. +. ..++.|.||||+||++++| |.++.|+...+..+..
T Consensus 210 ~~-~~~-~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~~ 287 (515)
T 3hwc_A 210 IP-GEQ-VIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFDW 287 (515)
T ss_dssp CC-GGG-CEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHHH
T ss_pred CC-CCe-EEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHHHHH
Confidence 21 223 899999999999999877776663 22 2378999999999999999 7888887655433333
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CC--CChHHH
Q psy12318 252 ERLVISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDR---GS--INSKEC 326 (392)
Q Consensus 252 ~r~~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~ 326 (392)
.+.......+|.+..++..+..++. .+| +.++|.||++|++|.+.+++++++++.+++..+. +. +....+
T Consensus 288 ~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~~~a 362 (515)
T 3hwc_A 288 VHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNPLIY 362 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCHHHH
Confidence 3222223344555555554444433 233 8999999999999999999999999999999875 32 456778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCC------h-----HHHHHHhhccCcccCChHHHHHHHHHHHH
Q psy12318 327 AGVFLVAAENAVKVALEAIQCLGGNGYINDY------P-----TGRYLRDAKLYEIGAGTSEVRRIVIGRSI 387 (392)
Q Consensus 327 ~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~------~-----l~r~~rd~~~~~~~~g~~~~~~~~l~~~~ 387 (392)
+++|+++++.+.++++.++|++||.+++-.+ | +++|++.. . ....+.+..-.|+..+
T Consensus 363 s~AK~~ase~~~rv~~~a~qi~GG~~i~~Ps~~d~~~pe~~~~l~ky~~g~---~-~~a~~R~kl~rl~~d~ 430 (515)
T 3hwc_A 363 DFGRAHFLQNQMSVMYELLDLAGRSSLMIPSEGQWDDSQSGQWFVKLNNGP---K-GNPRERVQIGRVIRDL 430 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGTSCCCHHHHHCTTTHHHHHHHTCCT---T-CCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCHHHhcCchhHHHHHHHhCCC---C-CCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997542 1 56666532 1 2444445444555444
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.96 E-value=1.2e-28 Score=239.69 Aligned_cols=236 Identities=15% Similarity=0.067 Sum_probs=192.0
Q ss_pred HHHHHhhhHHhcCCeeEEEeecCCCCC-----CCcCCceeEE-EEeCCeEEEeeeEeeeeCCCCCcEEEEEEEeCCCCCC
Q psy12318 113 QQKEKYLPALCSGEKIGCLAMSEPGSG-----SDVISMSLKA-EKKGDMYVLNGNKFWITNGPDADIAVVYARTNPNADK 186 (392)
Q Consensus 113 ~~~~~~l~~~~~g~~~~~~a~te~~~g-----sd~~~~~~~a-~~~~~g~~l~G~k~~vs~~~~ad~~lv~a~~~~~~~~ 186 (392)
+....|+..+...++..+.++++|... +...++..++ +++++||+|||.|.|+||++.||+++|++++.+..
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~-- 211 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGI-- 211 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTC--
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCC--
Confidence 456789999999999999999999631 1122233444 46789999999999999999999999999886654
Q ss_pred CCCceEEEEEeCCCCCccccccccccC---------CCCCC-cEEEEEcceeeCCCCcc--cCCCccHHHHHHhhcHHHH
Q psy12318 187 KQHGISTFIVEKGTPGFSKGKKLNKLG---------MRGSN-TGELIFENCQVPAENLL--GGENKGAYVLMSGLDLERL 254 (392)
Q Consensus 187 ~~~~~~~~lV~~~~~Gv~~~~~~~~~G---------~~~~~-s~~v~f~~v~Vp~~~~l--~~~~~g~~~~~~~~~~~r~ 254 (392)
+..+.++|+||.+.|||++.......+ .++.. .+.|.||||+||++++| |.++.++.+....+...+.
T Consensus 212 ~~d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~ 291 (517)
T 4g5e_A 212 PGDQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHY 291 (517)
T ss_dssp CGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHH
T ss_pred CccceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHH
Confidence 445678899999999999865443333 33332 37799999999999987 7777787777888888888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CCChHHHHHH
Q psy12318 255 VISAGPVGIMQACCDFAFNYVHERVQFGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRG-----SINSKECAGV 329 (392)
Q Consensus 255 ~~~a~~~G~a~~al~~~~~~~~~r~~~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 329 (392)
..++..+|.++.++..+..+++.. | +.++|.||++|++|...+|+++++++.++...... .|....++++
T Consensus 292 ~~~~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~a 366 (517)
T 4g5e_A 292 HALIRQSVRAELMAGLAILITEHI---G--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFG 366 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---T--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHH
Confidence 888888999999999888887643 3 78999999999999999999999999988765433 2466788999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccC
Q psy12318 330 FLVAAENAVKVALEAIQCLGGNGYIN 355 (392)
Q Consensus 330 k~~~~~~a~~~~~~~~~~~Gg~g~~~ 355 (392)
|.++++...+++.+++|++||.+++-
T Consensus 367 K~~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 367 RALYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccC
Confidence 99999999999999999999999983
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=95.04 E-value=0.26 Score=48.86 Aligned_cols=108 Identities=17% Similarity=0.092 Sum_probs=89.7
Q ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCC-ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCh
Q psy12318 281 FGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDR-GSI-NSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYP 358 (392)
Q Consensus 281 ~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~ 358 (392)
+|+.+.+.|.+..+|+++.+.++++.+.+.++.+.... +.+ ...+..++++|+.+...++-..+.++. .++.++..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 46788999999999999999999999999999988774 543 467889999999999999999999988 67777777
Q ss_pred HHHHHHhhccCcccCChH-HHHHHHHHHHHhhh
Q psy12318 359 TGRYLRDAKLYEIGAGTS-EVRRIVIGRSINAE 390 (392)
Q Consensus 359 l~r~~rd~~~~~~~~g~~-~~~~~~l~~~~l~~ 390 (392)
+...+..++-+.-+...+ ...+..|++.++++
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 592 (597)
T 3owa_A 560 LRMMLSSLRKLTRHTPLNVIPKKREIAAKILED 592 (597)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHc
Confidence 878887787777776544 45577899888764
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=78.57 E-value=34 Score=33.69 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=55.6
Q ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12318 281 FGTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSIN-SKECAGVFLVAAENAVKVALEAIQCL 348 (392)
Q Consensus 281 ~g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~~~~a~~~~~~~~~~~ 348 (392)
.|..+.+.+.+..+|+++...+..+.+.+.++.+....+.+. ..+..+++.|+.+...++...+.++.
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 574 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQ 574 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467888889999999999999999999999988777666543 34688899999888888887777733
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=76.70 E-value=58 Score=31.72 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=72.6
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCChHHH
Q psy12318 282 GTRIGEFQLMQGKIADMHVALSASRAYLYSVAKACDRGSINSKECAGVFLVAAENAVKVALEAIQCLGGNGYINDYPTGR 361 (392)
Q Consensus 282 g~~l~~~~~v~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~a~~~~~~~~~~~Gg~g~~~~~~l~r 361 (392)
|..+.+.+.+..+++++...+..+++.+.++.+. .+. ...+++.++.+...++...+.+++ .++.++.|.-.
T Consensus 469 ~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 540 (577)
T 2z1q_A 469 GQGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVL--PRLVEGDEARV 540 (577)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHG--GGTCCTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCchhH
Confidence 4566666889999999999999999998888766 221 788999999999999888877766 34445544333
Q ss_pred HHHhhccCcc-cCChHHHHHHHHHHHHhhh
Q psy12318 362 YLRDAKLYEI-GAGTSEVRRIVIGRSINAE 390 (392)
Q Consensus 362 ~~rd~~~~~~-~~g~~~~~~~~l~~~~l~~ 390 (392)
....++.+.. ...+++.+...|++.+++.
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~ 570 (577)
T 2z1q_A 541 VYSAARRLTKREPGDLVALRRQAAEAVLEA 570 (577)
T ss_dssp HHHHHHHHTCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHhc
Confidence 3323333333 3456777888999999774
Done!