BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12319
(161 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118150504|ref|NP_001071290.1| cys-loop ligand-gated ion channel subunit 8916 [Apis mellifera]
gi|110555530|gb|ABG75745.1| cys-loop ligand-gated ion channel subunit [Apis mellifera]
Length = 510
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 101/194 (52%), Gaps = 39/194 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF-------------------LVSSDEIRVHPH 41
MSF YCIAT+LEFA VHYFTK GSGEIP +VS VHP
Sbjct: 313 MSFGYCIATLLEFAGVHYFTKVGSGEIPLEEEEWENENESDYQDAFCNIVSCSPQTVHPE 372
Query: 42 PKSYVSEDEEDEQTNIHKIK--VDYRVCSVYEIRTLKVCPNIVDQLSTDEV--------- 90
VS +++ + V Y S+ T K P+ +++ + EV
Sbjct: 373 TIIDVSRRRSSLICDVYGVNESVSYERGSMTVSVTSK--PSTMERQTQTEVWIPKWRQFL 430
Query: 91 -NLVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWIS 143
L +E +RK+R++E + E HINSVS ID+V+RI+FPASFGLLN+ YW+
Sbjct: 431 YCLAGDESFRKRRQREAAGNCRKRGEKIARHINSVSYIDKVARIVFPASFGLLNICYWVI 490
Query: 144 YITDQENFVWKDPP 157
Y+T QE F W+D P
Sbjct: 491 YVTYQEEFKWQDSP 504
>gi|357627559|gb|EHJ77212.1| cys-loop ligand-gated ion channel subunit [Danaus plexippus]
Length = 333
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 95/186 (51%), Gaps = 36/186 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSS-----DEIRVHPHPKSYVS-------- 47
MSFFYCIAT+LEFA VHYFTK GSGEI S +E+ ++
Sbjct: 159 MSFFYCIATLLEFAGVHYFTKVGSGEIVIDDSEWEDLIEEVGGDAFAARQLAVRRRSSAR 218
Query: 48 ----------EDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEK 97
D E E + +++ + E+R P+ L L +++
Sbjct: 219 SSNNFSMPGVSDNEGEMQDQQSVRLTMERTTQTEVRV----PHWRQLLYC----LAGDDQ 270
Query: 98 YRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
YR++R++E G HINSVS IDR +R+LFPASF LLNLFYW+ Y E+F W D P
Sbjct: 271 YRRQRQREAGNRG---HINSVSHIDRAARVLFPASFALLNLFYWMIYAFSNEDFAWSDHP 327
Query: 158 --TISH 161
T+SH
Sbjct: 328 INTLSH 333
>gi|383863328|ref|XP_003707133.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 535
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 59/204 (28%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF-------------------LVSSDEIRVHPH 41
MSF YCIAT+LEFA VHYFTK GSGEIP +VS VHP
Sbjct: 338 MSFGYCIATLLEFAGVHYFTKVGSGEIPLDEEELENESETDFQDGFCSIVSCSPQTVHP- 396
Query: 42 PKSYVSEDEEDEQTNIHKIKVDYRVCSVYEIR----------TLKVC--PNIVDQLSTDE 89
+ +IH+ + +C VY I T+ V P+ +++ + +
Sbjct: 397 ----------ETIIDIHRRRSSL-ICDVYGINESASYGRESMTVSVTSKPSTMERQTQTD 445
Query: 90 V----------NLVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASF 133
V L +E +R++R++E + E HINSVS ID+V+RI+FPASF
Sbjct: 446 VWIPKWRQFLYCLAGDEAFRRRRQKEAAGNCRKHGEKIARHINSVSYIDKVARIVFPASF 505
Query: 134 GLLNLFYWISYITDQENFVWKDPP 157
G LN+ YW+ Y+T QE F W+DPP
Sbjct: 506 GFLNVCYWLIYVTYQEEFKWQDPP 529
>gi|307189539|gb|EFN73916.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Camponotus
floridanus]
Length = 505
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 98/195 (50%), Gaps = 38/195 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF----------------------LVSSDEIRV 38
MSF YCIAT+LEFA VHYFTK GSGEIP ++S
Sbjct: 302 MSFGYCIATLLEFAGVHYFTKIGSGEIPLDDEEWEDWEGITNEEFEDTFGTIISCSPQTD 361
Query: 39 HPHPKSYVSEDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEV-------- 90
HP + + I+ V Y+ + P+ +++ + E+
Sbjct: 362 HPEIGDTSTRRRGSLISTIYSDGVTYKDSCRSITVAVSSKPSTMERQTQTELILPLWRQF 421
Query: 91 --NLVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
L ++ +R++R++EV+ + HINSVS IDRV+RI+FPASFGLLN+ YW+
Sbjct: 422 LYCLAGDDAFRRRRQREVTSSYRKCGDRISRHINSVSYIDRVARIVFPASFGLLNVCYWV 481
Query: 143 SYITDQENFVWKDPP 157
Y+T QE F W+DPP
Sbjct: 482 VYVTYQEEFKWQDPP 496
>gi|270006459|gb|EFA02907.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 538
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 94/185 (50%), Gaps = 30/185 (16%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
MSFFYCIAT+LEFA VHYFTK GSGEIP E P + E E +
Sbjct: 346 MSFFYCIATLLEFAGVHYFTKVGSGEIPVDEDDWEDCNEPEEEMIGMSAAELENSLSPAS 405
Query: 61 KVDYR----VCSVYEIRTL-------------KVCPNI---VDQLSTDEVNL-------- 92
+ R +C +Y L +V P + V++ + EV L
Sbjct: 406 RAGRRKSSLICPIYNNTALHYSSKRTSLTSNTQVPPPVRLTVERTTQTEVRLPKWKQFLY 465
Query: 93 --VANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQEN 150
++K+R++R++E + H+NSVS IDR +RILFPASFG NL YW+ Y T Q++
Sbjct: 466 CLKGDDKFRRQRQREAAAGASSEHVNSVSLIDRAARILFPASFGFFNLIYWMIYFTYQDD 525
Query: 151 FVWKD 155
F W D
Sbjct: 526 FKWAD 530
>gi|322782659|gb|EFZ10522.1| hypothetical protein SINV_01657 [Solenopsis invicta]
Length = 569
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 60/206 (29%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-GSGEIPF----------------------LVSSDEIR 37
MSF YCIAT+LEFA VHYFTK SGEIP ++S
Sbjct: 366 MSFGYCIATLLEFAGVHYFTKVIDSGEIPLDDEEWEEWKDIAGEEFEDTFRSMISCSPQA 425
Query: 38 VHPHPK---------SYVSEDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTD 88
VHP + S+D E+ + H I V + P+ +++ +
Sbjct: 426 VHPEINTKKRGSLISALYSDDVTYERDSCHSITV-----------AISSKPSTMERQTQT 474
Query: 89 EV----------NLVANEKYRKKREQEVS----REGYQF---HINSVSKIDRVSRILFPA 131
E L ++ +R++R++E + + GY+ HINSVS IDRV+RI+FPA
Sbjct: 475 EFILPIWRQFLYCLAGDDAFRRRRQREAASNYRKCGYRMSRRHINSVSYIDRVARIVFPA 534
Query: 132 SFGLLNLFYWISYITDQENFVWKDPP 157
SFGLLN+ YW+ Y+T QE F W+DPP
Sbjct: 535 SFGLLNVCYWVVYVTYQEEFKWQDPP 560
>gi|340727211|ref|XP_003401942.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 520
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 102/205 (49%), Gaps = 51/205 (24%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF-------------------LVSSDEIRVHPH 41
MSF YCIAT+LEFA VHYFTK GSGEIP +VS VHP
Sbjct: 323 MSFGYCIATLLEFAGVHYFTKVGSGEIPLDEEELENESETDYQDGFCGIVSRSPRTVHPE 382
Query: 42 PKSYVSEDEEDEQTNIHKIK--VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYR 99
V +++ + V Y S T K P+ +++ + EV + ++
Sbjct: 383 TIIDVPRRRSSLLCDVYDVNESVSYGRGSTTVSVTSK--PSTMERQTQTEVWIPKWRQFL 440
Query: 100 ---------------------KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNL 138
KK+ ++++R HINSVS ID+V+R++FPASFGLLN+
Sbjct: 441 YCLAGDEEFRRRRQREAAGNCKKKGEKIAR-----HINSVSYIDKVARVVFPASFGLLNV 495
Query: 139 FYWISYITDQENFVWKDPP--TISH 161
YW+ Y+T QE F W+DPP +ISH
Sbjct: 496 CYWVIYVTYQEEFKWQDPPFGSISH 520
>gi|158262729|ref|NP_001103425.1| cys-loop ligand-gated ion channel subunit precursor [Tribolium
castaneum]
gi|156447625|gb|ABU63605.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 549
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 96/196 (48%), Gaps = 41/196 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
MSFFYCIAT+LEFA VHYFTK GSGEIP E P + E E +
Sbjct: 346 MSFFYCIATLLEFAGVHYFTKVGSGEIPVDEDDWEDCNEPEEEMIGMSAAELENSLSPAS 405
Query: 61 KVDYR----VCSVYEIRTL-------------KVCPNI---VDQLSTDEVNL-------- 92
+ R +C +Y L +V P + V++ + EV L
Sbjct: 406 RAGRRKSSLICPIYNNTALHYSSKRTSLTSNTQVPPPVRLTVERTTQTEVRLPKWKQFLY 465
Query: 93 --VANEKYRKKREQEVS-------REGYQFH----INSVSKIDRVSRILFPASFGLLNLF 139
++K+R++R++E + G+ H +NSVS IDR +RILFPASFG NL
Sbjct: 466 CLKGDDKFRRQRQREAAAGASNGNERGHHCHAPRHVNSVSLIDRAARILFPASFGFFNLI 525
Query: 140 YWISYITDQENFVWKD 155
YW+ Y T Q++F W D
Sbjct: 526 YWMIYFTYQDDFKWAD 541
>gi|350423054|ref|XP_003493370.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 535
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 98/200 (49%), Gaps = 50/200 (25%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF-------------------LVSSDEIRVHPH 41
MSF YCIAT+LEFA VHYFTK GSGEIP +VS VHP
Sbjct: 337 MSFGYCIATLLEFAGVHYFTKVGSGEIPLDEEELENESETDYQDGFCGIVSRSPQTVHPE 396
Query: 42 PKSYVSEDEEDEQTNIHKIK--VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNL------- 92
V +++ + V Y S + ++ P+ +++ + EV +
Sbjct: 397 TIIDVPRRRSSLLCDVYDVNESVSYGRGSSMTV-SVTSKPSTMERQTQTEVWIPKWRQFL 455
Query: 93 ---------------VANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLN 137
A RKK E+ ++R HINSVS ID+V+R++FPASFGLLN
Sbjct: 456 YCLAGDEEFRRRRQREAAGNCRKKGEK-IAR-----HINSVSYIDKVARVVFPASFGLLN 509
Query: 138 LFYWISYITDQENFVWKDPP 157
+ YW+ Y+T QE F W+DPP
Sbjct: 510 VCYWVIYVTYQEEFKWQDPP 529
>gi|347963040|ref|XP_001237369.2| AGAP000039-PA [Anopheles gambiae str. PEST]
gi|333467388|gb|EAU77351.2| AGAP000039-PA [Anopheles gambiae str. PEST]
Length = 464
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF-------LVSSDEIRVHPHPKSYVSEDEEDE 53
MSFFYCIAT+LEFA VHYFTK GSGEIP + +EIR P + ++S E
Sbjct: 281 MSFFYCIATLLEFAGVHYFTKVGSGEIPLDEEEWEDMEGVEEIRDLPTLQQHLSTAAAIE 340
Query: 54 QTNIHKIKV-DYRVCSVYEIRTLKVCPNIVDQLSTDE-----------------VNLVAN 95
+ + +C +Y T P LST E + + +
Sbjct: 341 SPRLLAARRRSSLICPIYNDPTHMFKPT-SSHLSTMERTTQTEPPKEPTWKQVWLCFLGD 399
Query: 96 EKYRKKREQEVS-REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
+++R++R++E S R G HINSVS ID+ +R+LFPASF N+ YW+ Y T Q +F W
Sbjct: 400 DQFRRRRQREASARGGGNRHINSVSLIDQAARVLFPASFTFFNILYWLVYYTYQADFTW 458
>gi|307611933|ref|NP_001182633.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
gi|306448443|gb|ADM88004.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
Length = 594
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 90/190 (47%), Gaps = 38/190 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
MSFFYCIAT+LEFA VHYFTK GSGEI S E + E+ + ++
Sbjct: 414 MSFFYCIATLLEFAGVHYFTKVGSGEIVIDDSEWEELI---------EEVGGDAVAAREL 464
Query: 61 KVDYRVCSVYEIRTLKV-----CPNIVDQLSTDE-VNLVANEKYRKKREQEVSR------ 108
V R + L + P D L T++ V + + + E V R
Sbjct: 465 AVRRRSSARSATNNLSMPSQSSNPTTSDNLETEQPVAVRLTMERTTQTETRVPRWRQLLY 524
Query: 109 ---------------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
G + HINSVS IDR +R+LFPASF LLNLFYW+ Y ++F W
Sbjct: 525 CLAGDDRYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAW 584
Query: 154 KDPP--TISH 161
D P T+SH
Sbjct: 585 SDNPINTLSH 594
>gi|195457044|ref|XP_002075401.1| GK17720 [Drosophila willistoni]
gi|194171486|gb|EDW86387.1| GK17720 [Drosophila willistoni]
Length = 562
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 96/220 (43%), Gaps = 67/220 (30%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL---------VSSDEIRVH--PHPKSYVSED 49
MSF YCIAT+LEFA VHYFTK GSGEIP + VS E S+V +
Sbjct: 338 MSFLYCIATLLEFAGVHYFTKLGSGEIPRVDDEWEDIGAVSLSEAHASDTGADASHVGVE 397
Query: 50 EEDEQTNIHK-IKVDYRVC------------------------SVYEIRTLKVCPNIVD- 83
+D Q +I + I D VC S + R +CP D
Sbjct: 398 SDDHQDDISEGINSDSDVCVCAEHDVVGLECELPLPASLNGNASTFRKRNALICPIYNDP 457
Query: 84 --------QLSTDE-----------------VNLVANEKYRKKREQEVSREGY-----QF 113
ST E + L + K+RK+RE++ + E
Sbjct: 458 YIFPKSTSHASTMERTTQTEPPVVSRKHQVWLCLKGDNKFRKQRERDAAAEKSGQGRGAT 517
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
++NSVS IDRVSRI FP SF L NL YW++Y ++ F W
Sbjct: 518 YVNSVSLIDRVSRIAFPMSFALFNLLYWLAYGMYKKEFSW 557
>gi|198460841|ref|XP_002135928.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
gi|198139747|gb|EDY70824.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
Length = 502
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 55/208 (26%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL------VSSDEIRVHPHPKSYVSE------ 48
MSF YCIAT+LEFA VHYFTK GSGEIP L + I VS+
Sbjct: 290 MSFLYCIATLLEFAGVHYFTKLGSGEIPRLEEHLENIRKTNIAHGIEANKKVSDEDIEDN 349
Query: 49 --DEEDEQTNIHK----------------------------IKVDYRVCSVYEI------ 72
DE EQ N K + C ++
Sbjct: 350 GSDEASEQMNSQNDICVCSENDTLEFESAESLPTALDDTAFRKRNALTCPIFTASSRGAT 409
Query: 73 --RTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE----GYQF-HINSVSKIDRVS 125
RT + P ++ ++ + L +++++RK+RE++ + E G+ ++NSVS IDR +
Sbjct: 410 MERTTQTEPPVISRMRQIWLCLKSDDQFRKQRERDAAAEKTEQGHNVSYVNSVSLIDRFA 469
Query: 126 RILFPASFGLLNLFYWISYITDQENFVW 153
RI FP SF L NL YW++Y ++ F W
Sbjct: 470 RIAFPMSFVLFNLLYWLAYGMYKKEFSW 497
>gi|195175701|ref|XP_002028564.1| GL25394 [Drosophila persimilis]
gi|194104908|gb|EDW26951.1| GL25394 [Drosophila persimilis]
Length = 453
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 55/208 (26%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL------VSSDEIRVHPHPKSYVSE------ 48
MSF YCIAT+LEFA VHYFTK GSGEIP L + I VS+
Sbjct: 241 MSFLYCIATLLEFAGVHYFTKLGSGEIPRLEEHLENIRKTNIAHGIEANKKVSDEDIEDN 300
Query: 49 --DEEDEQTNIHK----------------------------IKVDYRVCSVYEI------ 72
DE EQ N K + C ++
Sbjct: 301 GSDEASEQMNSQNDICVCSENDTLEFESAESLPTALDDTAFRKRNALTCPIFTASSRGAT 360
Query: 73 --RTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE----GYQF-HINSVSKIDRVS 125
RT + P ++ ++ + L +++++RK+RE++ + E G+ ++NSVS IDR +
Sbjct: 361 MERTTQTEPPVISRMRQIWLCLKSDDQFRKQRERDAAAEKTEQGHNVSYVNSVSLIDRFA 420
Query: 126 RILFPASFGLLNLFYWISYITDQENFVW 153
RI FP SF L NL YW++Y ++ F W
Sbjct: 421 RIAFPMSFVLFNLLYWLAYGMYKKEFSW 448
>gi|195392958|ref|XP_002055121.1| GJ18972 [Drosophila virilis]
gi|194149631|gb|EDW65322.1| GJ18972 [Drosophila virilis]
Length = 534
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEE--------- 51
MSF YCIAT+LEFA VHYFTK GSGE P L E + +V D +
Sbjct: 343 MSFLYCIATLLEFAGVHYFTKLGSGEFPRLEDEWEDVANSDSDVFVFADHDALHCELPLP 402
Query: 52 ---------------------DEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEV 90
+Q H S E RT + P V ++ +
Sbjct: 403 AELNGSGYPKHSTFSCPIYNNQQQAPAHIFPKLSSHASTME-RTTQTEPPAVSRMRQMWL 461
Query: 91 NLVANEKYRKKREQEVSREGY-----QFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
L + K+RK+RE++ + E ++NS+S ID+V+R+ FP +F L NL YW++Y
Sbjct: 462 CLKGDLKFRKQRERDAAAEKSGQGRGASYVNSISLIDQVARVAFPMTFALFNLLYWLAYG 521
Query: 146 TDQENFVW 153
++ F W
Sbjct: 522 MYKKEFSW 529
>gi|195355479|ref|XP_002044219.1| GM22598 [Drosophila sechellia]
gi|194129508|gb|EDW51551.1| GM22598 [Drosophila sechellia]
Length = 510
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 71/226 (31%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL-------------------VSSD-EIRVHP 40
MSF YCIAT+LEFA VHYFTK GSGE P L V D E P
Sbjct: 282 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADP 341
Query: 41 HP---KSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI---------------- 72
S SE++E+E ++ VC YE+
Sbjct: 342 FADEDSSNGSENDENEGGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNA 401
Query: 73 ------------------RTLKVCPNIVDQLSTDEVNLVANEKYRKKRE-----QEVSRE 109
RT + P V +L + L ++ +RK+RE Q+ +
Sbjct: 402 IFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQG 461
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 462 GANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 507
>gi|194894096|ref|XP_001978007.1| GG17930 [Drosophila erecta]
gi|190649656|gb|EDV46934.1| GG17930 [Drosophila erecta]
Length = 512
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 95/228 (41%), Gaps = 73/228 (32%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL-------------------VSSD-EIRVHP 40
MSF YCIAT+LEFA VHYFTK GSGE P L V D E
Sbjct: 282 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHGGEVDGDGEAEADA 341
Query: 41 HP-----KSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI-------------R 73
P S SE++E+E ++ VC YE+ R
Sbjct: 342 DPFADEDSSNGSENDENEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKR 401
Query: 74 TLKVCP----------NIVDQLSTDEVNLVA-----------NEKYRKKRE-----QEVS 107
CP N +++ + E V+ + +RK+RE Q+
Sbjct: 402 NAMFCPTYNDPSYILPNTMERTTQTEAPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSE 461
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
+ G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 462 QGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 509
>gi|195479054|ref|XP_002100748.1| GE17237 [Drosophila yakuba]
gi|194188272|gb|EDX01856.1| GE17237 [Drosophila yakuba]
Length = 512
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 93/228 (40%), Gaps = 73/228 (32%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL-------------------VSSD-EIRVHP 40
MSF YCIAT+LEFA VHYFTK GSGE P L V D E
Sbjct: 282 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEAEADA 341
Query: 41 HP-----KSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI-------------R 73
P S SE++E+E ++ VC YE+ R
Sbjct: 342 DPFADEDSSDGSENDENEGGVSESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKR 401
Query: 74 TLKVCPNIVD---------------------QLSTDEVNLVANEKYRKKRE-----QEVS 107
CP D +L + L ++ +RK+RE Q+
Sbjct: 402 NAIFCPTYTDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSE 461
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
+ G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 462 QGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 509
>gi|281360963|ref|NP_001162770.1| CG8916, isoform C [Drosophila melanogaster]
gi|272506127|gb|ACZ95305.1| CG8916, isoform C [Drosophila melanogaster]
Length = 510
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 71/226 (31%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL-------------------VSSD-EIRVHP 40
MSF YCIAT+LEFA VHYFTK GSGE P L V D E P
Sbjct: 282 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADP 341
Query: 41 ---HPKSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI-------------RTL 75
S SE++++E ++ VC YE+ R
Sbjct: 342 FADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNA 401
Query: 76 KVC----------PNIVDQLSTDE-----------VNLVANEKYRKKRE-----QEVSRE 109
C PN +++ + E + L ++ +RK+RE Q+ +
Sbjct: 402 IFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQG 461
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 462 GANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 507
>gi|66771987|gb|AAY55305.1| IP12479p [Drosophila melanogaster]
Length = 416
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 91/226 (40%), Gaps = 71/226 (31%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGS-----------------------GEIPFLVSSDEIR 37
MSF YCIAT+LEFA VHYFTK GS GE+ +D
Sbjct: 188 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADP 247
Query: 38 VHPHPKSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI---------------- 72
S SE++++E ++ VC YE+
Sbjct: 248 FADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNA 307
Query: 73 ------------------RTLKVCPNIVDQLSTDEVNLVANEKYRKKRE-----QEVSRE 109
RT + P V +L + L ++ +RK+RE Q+ +
Sbjct: 308 IFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQG 367
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 368 GANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 413
>gi|281360961|ref|NP_573090.3| CG8916, isoform B [Drosophila melanogaster]
gi|66772011|gb|AAY55317.1| IP12579p [Drosophila melanogaster]
gi|272506126|gb|AAF48539.4| CG8916, isoform B [Drosophila melanogaster]
Length = 612
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 91/226 (40%), Gaps = 71/226 (31%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGS-----------------------GEIPFLVSSDEIR 37
MSF YCIAT+LEFA VHYFTK GS GE+ +D
Sbjct: 384 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADP 443
Query: 38 VHPHPKSYVSEDEEDEQTNIHKIKVDYRVCSV---------YEI---------------- 72
S SE++++E ++ VC YE+
Sbjct: 444 FADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNA 503
Query: 73 ------------------RTLKVCPNIVDQLSTDEVNLVANEKYRKKRE-----QEVSRE 109
RT + P V +L + L ++ +RK+RE Q+ +
Sbjct: 504 IFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQG 563
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
G ++NSVS IDRV+RI FP SF LNL YW +Y ++ F W +
Sbjct: 564 GANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWSN 609
>gi|307200309|gb|EFN80574.1| hypothetical protein EAI_01700 [Harpegnathos saltator]
Length = 145
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 8/78 (10%)
Query: 92 LVANEKYRKKREQEVSREGYQF------HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
L ++ +R++R++E + ++ HINSVS IDRV+RI+FPASFGLLN+ YW+ Y+
Sbjct: 68 LAGDDAFRRRRQREAASSYRKYGDRLSRHINSVSYIDRVARIVFPASFGLLNVCYWVVYV 127
Query: 146 TDQENFVWKDPP--TISH 161
T QE F W+DPP +ISH
Sbjct: 128 TYQEEFKWQDPPIGSISH 145
>gi|380023906|ref|XP_003695750.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Apis florea]
Length = 303
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 6/72 (8%)
Query: 92 LVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
L +E +RK+R++E + E HINSVS ID+V+RI+FPASFGLLN+ YW+ Y+
Sbjct: 226 LAGDESFRKRRQREAAGNCRKRGEKIARHINSVSYIDKVARIVFPASFGLLNVCYWVIYV 285
Query: 146 TDQENFVWKDPP 157
T QE F W+DPP
Sbjct: 286 TYQEEFKWQDPP 297
>gi|195044262|ref|XP_001991786.1| GH12851 [Drosophila grimshawi]
gi|193901544|gb|EDW00411.1| GH12851 [Drosophila grimshawi]
Length = 552
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 58/210 (27%)
Query: 1 MSFFYCIATILEFAAVHYFTKTG--------------------SGEIP------------ 28
MSF YCIAT+LEFA VHYFTK G SGEI
Sbjct: 339 MSFLYCIATLLEFAGVHYFTKLGSGEIPRMEEEWEDIGALGFTSGEIADAAEASDDSEPA 398
Query: 29 -----FLVSSDEIRVH--------------PHPKSYVSEDEEDEQTNIHKIKVDYRVCSV 69
V +D +H P ++ ++Q N I +
Sbjct: 399 NSDSDVFVFADHDTLHCELPLPADLNGGAYPKRNAFSCPIYNNQQENPAHIFPKLSSHTS 458
Query: 70 YEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE------GYQFHINSVSKIDR 123
RT + P V ++ + L + K+R++RE++ + E G + +NS+S IDR
Sbjct: 459 TMERTTQTEPPAVSRMRQMWLCLKGDVKFRRQRERDAAAEKSVQGRGASY-VNSISLIDR 517
Query: 124 VSRILFPASFGLLNLFYWISYITDQENFVW 153
V+R+ FP +F L NL YW++Y ++ F W
Sbjct: 518 VARVAFPMTFALFNLLYWLAYGMYKKEFSW 547
>gi|443727465|gb|ELU14206.1| hypothetical protein CAPTEDRAFT_100858 [Capitella teleta]
Length = 463
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 45/169 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + +ATI++FAAVHYFTK GSGEI L S D ED+ V
Sbjct: 321 FAFILATIIQFAAVHYFTKHGSGEIMPLDS----------------DGEDDV-------V 357
Query: 63 DYRVCSVYEIRTLKVCP---NIVDQLSTDEVN--------------LVANEKYR--KKRE 103
D+ VC ++ P N+V Q ++ E L+ N+KYR K R
Sbjct: 358 DHNVCEDGQVLPSMGGPANGNVVHQYNSLEEGSHFKEACCHKFYHCLIGNQKYRDLKIRR 417
Query: 104 QEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFV 152
S+ G INSVS++D SR+LFP +F + N+ YW+ Y+ +++ +
Sbjct: 418 GPKSKGG---RINSVSEVDMASRVLFPLAFAIFNVVYWVFYLDNRDVLI 463
>gi|332026034|gb|EGI66185.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Acromyrmex
echinatior]
Length = 429
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 7/66 (10%)
Query: 99 RKKREQEVS----REGYQF---HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENF 151
+++R++EV+ + G + +INSVS IDRV+RI+FPASFGLLN+ YW+ Y+T QE F
Sbjct: 355 KRRRQREVASNYRKRGNRMSKRYINSVSYIDRVARIVFPASFGLLNVCYWVVYVTYQEEF 414
Query: 152 VWKDPP 157
W+DPP
Sbjct: 415 KWQDPP 420
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/21 (85%), Positives = 19/21 (90%)
Query: 1 MSFFYCIATILEFAAVHYFTK 21
MSF YCIAT+LEFA VHYFTK
Sbjct: 324 MSFGYCIATLLEFAGVHYFTK 344
>gi|321478277|gb|EFX89234.1| hypothetical protein DAPPUDRAFT_40350 [Daphnia pulex]
Length = 426
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATI++FA VHYFTK G GE+ F + + S S++ T+
Sbjct: 279 LSFGFIFATIVQFAFVHYFTKIGFGELYFSDMTMDDEDDEQLDS--SDEGFPSATHTPSP 336
Query: 61 KVDYRVCSV-YEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
V +V SV +R +K + Q+ D+ + +++ KK Q +++ +NSVS
Sbjct: 337 TVARKVYSVENHLRNMKAEETAIVQIQPDDGS-SPSQRRGKKTNQRKAQQWDGKAMNSVS 395
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID++SRI FP F +NLFYW +Y T
Sbjct: 396 KIDKISRIFFPVLFIAINLFYWYTYAT 422
>gi|443716697|gb|ELU08088.1| hypothetical protein CAPTEDRAFT_148064 [Capitella teleta]
Length = 393
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M + + AT+LEFA VHYFTK GSGE F +D P S S D+E E +
Sbjct: 242 MCYVFVTATLLEFAGVHYFTKIGSGEATF--DADYC-----PPSEDSADDEGEDIPNNTN 294
Query: 61 KVDYRVCSVY------------EIRTLKVCPNIVDQLSTDEVN-LVANEKYRKKREQEVS 107
+ Y SVY R +V P D + L + Y+K + +
Sbjct: 295 SMHYHSNSVYYRSHDNQCSLNGGAREAEVSPTKRDSSFYKLLKCLTGSYSYKKVMIERSN 354
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+G +N VS+IDR +R+LFP SF +LN+ YW++Y
Sbjct: 355 PQG----VNRVSRIDRAARVLFPLSFIILNIIYWMTY 387
>gi|269856285|gb|ACZ51425.1| cys-loop ligand-gated ion channel subunit, partial [Nasonia
vitripennis]
Length = 561
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 92 LVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
L+ + +RK+R++E + E + +INSVS IDR +RI+FPASF LL + YW+ Y+
Sbjct: 484 LMGDMAFRKRRQREAADGCRKHGERIERYINSVSHIDRAARIVFPASFTLLIVCYWMVYV 543
Query: 146 TDQENFVWKDPP 157
T QE F W+DPP
Sbjct: 544 TYQEEFKWQDPP 555
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF 29
MSF YCIAT+LEFA VHYFTK GSGE P
Sbjct: 330 MSFGYCIATLLEFAGVHYFTKVGSGEFPL 358
>gi|345487406|ref|XP_001600806.2| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Nasonia
vitripennis]
Length = 570
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 92 LVANEKYRKKREQEVSR------EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
L+ + +RK+R++E + E + +INSVS IDR +RI+FPASF LL + YW+ Y+
Sbjct: 493 LMGDMAFRKRRQREAADGCRKHGERIERYINSVSHIDRAARIVFPASFTLLIVCYWMVYV 552
Query: 146 TDQENFVWKDPP 157
T QE F W+DPP
Sbjct: 553 TYQEEFKWQDPP 564
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF 29
MSF YCIAT+LEFA VHYFTK GSGE P
Sbjct: 339 MSFGYCIATLLEFAGVHYFTKVGSGEFPL 367
>gi|391345576|ref|XP_003747061.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 528
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 42/176 (23%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGE-IPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHK 59
M F Y I ++LEFA VHYFTK GSGE P + + DE K+Y E E+ E H
Sbjct: 334 MCFTYVICSLLEFAGVHYFTKVGSGEYFPGVHTYDE--RDDTIKTY-QELEDCEIMRAHS 390
Query: 60 I-KVDYRVCSVYEIRTLKVCPNIVD-QLSTDEVNL------------------------- 92
+ R S+Y+ PN +D ++ST L
Sbjct: 391 LLDSALRQRSLYD----GGVPNNIDGRVSTSMPTLNSHYLPYVPAPPPPQPRRLPCFLEF 446
Query: 93 ----VANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+++EKYR + + + + +NSVS+ID+VSR+LFP SF LN+ YW+ Y
Sbjct: 447 LMCMISHEKYRDELRRSAPKGQF---VNSVSQIDKVSRVLFPVSFFFLNIIYWLGY 499
>gi|380013377|ref|XP_003690737.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Apis
florea]
Length = 514
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 29/174 (16%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSD-----------EIRVHPHPKSYVSED 49
+SF + ATI++FA VHYFTK GSGE F SSD E P K +S+
Sbjct: 333 LSFAFIFATIIQFAVVHYFTKYGSGECYF--SSDLSESETSSDEEEADTRPLKKESISQS 390
Query: 50 EEDEQTNIHKIKVDYRVCSVYEIRTLKVCP-NIVDQLSTD------EVNLVANEKYRKKR 102
+ N+ R ++ E ++V P + + + S + +++ VA R
Sbjct: 391 NKRTAGNLAARGHPSRNFTMNEDGMIEVIPLSAIPEPSRNPTMGHWQMSCVACSP--PPR 448
Query: 103 EQEVSREGYQF-------HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
+ SR+G NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 449 QTPPSRKGSGRRRRRRTPRYNSVSKIDRASRIVFPVFFLAINVFYWFAYLSRSE 502
>gi|350539609|ref|NP_001234887.1| GABA-gated ion channel GRD precursor [Nasonia vitripennis]
gi|269856283|gb|ACZ51424.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 447
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 35/146 (23%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATI++FA VHYFTK GSGE F SE E D +++ +
Sbjct: 329 LSFGFIFATIIQFAVVHYFTKYGSGECYF----------------NSETENDVESSDSET 372
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ ++ P ST + +K R + +R NSVSK
Sbjct: 373 E-------------MRQTP------STSSICQPQPPPPQKLRRGQGTRHRRMPRYNSVSK 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYIT 146
IDR SR++FP F +NLFYW +Y++
Sbjct: 414 IDRASRLVFPLFFLAINLFYWFAYLS 439
>gi|110555510|gb|ABG75735.1| GABA-gated ion channel [Apis mellifera]
Length = 463
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSD-----------EIRVHPHPKSYVSED 49
+SF + ATI++FA VHYFTK GSGE F SSD E P K +++
Sbjct: 282 LSFAFIFATIIQFAVVHYFTKYGSGECYF--SSDLSESETSSDEEEADTRPLKKEPITQS 339
Query: 50 EEDEQTNIHKIKVDYRVCSVYEIRTLKVCP-NIVDQLSTD------EVNLVA-----NEK 97
+ N+ + R ++ E ++V P + + + S + +++ VA +
Sbjct: 340 NKRTAGNLATREHPSRNFTMSEDGMIEVIPLSAIPEPSKNPAMGHWQMSCVACSPPPRQT 399
Query: 98 YRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
++E R NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 400 PPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINVFYWFAYLSRSE 451
>gi|328783196|ref|XP_397242.4| PREDICTED: GABA-gated ion channel isoform 1 [Apis mellifera]
Length = 514
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSD-----------EIRVHPHPKSYVSED 49
+SF + ATI++FA VHYFTK GSGE F SSD E P K +++
Sbjct: 333 LSFAFIFATIIQFAVVHYFTKYGSGECYF--SSDLSESETSSDEEEADTRPLKKEPITQS 390
Query: 50 EEDEQTNIHKIKVDYRVCSVYEIRTLKVCP-NIVDQLSTD------EVNLVA-----NEK 97
+ N+ + R ++ E ++V P + + + S + +++ VA +
Sbjct: 391 NKRTAGNLATREHPSRNFTMSEDGMIEVIPLSAIPEPSKNPAMGHWQMSCVACSPPPRQT 450
Query: 98 YRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
++E R NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 451 PPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINVFYWFAYLSRSE 502
>gi|390340436|ref|XP_003725243.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 21/159 (13%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + + ++EFA V+YFTK +G +P + +E + +E E+ E + + +
Sbjct: 350 LCFAFVLGAVIEFATVNYFTKRRTGMLPGMADDEEDDIAQ------AEVEKVEASLMRRK 403
Query: 61 KVDY---RVCSVYEIRTLKVCPNIVDQLSTDEVN---------LVANEKYRKKREQEVSR 108
K + R + Y+ +++ P+ ++ +D N + N +YR+ R + R
Sbjct: 404 KKRFSLIRGFTRYQGKSVSRTPSDEERRFSDHNNSLCSDILNCITGNAEYRESR---LRR 460
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
Q NSVSKID ++RI FP F L+N+ YW +I D
Sbjct: 461 SKDQKPFNSVSKIDELARIGFPLGFFLMNVLYWCIFILD 499
>gi|241680548|ref|XP_002411570.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504305|gb|EEC13799.1| conserved hypothetical protein [Ixodes scapularis]
Length = 169
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYV----SEDEEDEQTN 56
M F + I T+LE+A VHYFTK P + P P Y+ S ++
Sbjct: 33 MCFSFVIFTLLEYAGVHYFTK----RWPQWDCESVVSESPVPARYLEYVPSRSHQELHHR 88
Query: 57 IHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHIN 116
+ + Y C+ + +V NE++R + R +N
Sbjct: 89 ARRRRKHYHCCAQFLY------------------CMVGNERFRNEMRLRADRGAI---VN 127
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
SVS+IDRVSR+LFP F L+NLFYW S+ D+
Sbjct: 128 SVSQIDRVSRVLFPFCFILINLFYWFSFGRDR 159
>gi|242025548|ref|XP_002433186.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212518727|gb|EEB20448.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 423
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 75/184 (40%), Gaps = 53/184 (28%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF---LVSSDEIRVHPHPKSYVSEDEEDEQTNI 57
+SF + ATI++FA VHYFTK GSGE F L S + P +S + Q +
Sbjct: 251 LSFAFIFATIIQFAVVHYFTKYGSGECYFGMDLSSESDSNSIPFERSIKLRSSDSSQNSK 310
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQE---VSREGY--Q 112
+ K+D V + Q D+ EKY KR+ +S
Sbjct: 311 TEFKID------------DVSSRVQKQSGDDD------EKYHGKRKNNKTGISGNAITQN 352
Query: 113 FHI---------------------------NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
FH NSVSKID++SRI+FP F +N+ YW SY+
Sbjct: 353 FHSFNSPGSSSSLNNVNGKKRRRKRRIPRYNSVSKIDKMSRIVFPMLFAAINVLYWYSYL 412
Query: 146 TDQE 149
E
Sbjct: 413 IRSE 416
>gi|195555117|ref|XP_002077030.1| GD24823 [Drosophila simulans]
gi|194203048|gb|EDX16624.1| GD24823 [Drosophila simulans]
Length = 512
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 73 RTLKVCPNIVDQLSTDEVNLVANEKYRKKRE-----QEVSREGYQFHINSVSKIDRVSRI 127
RT + P V +L + L ++ +RK+RE Q+ + G ++NSVS IDRV+RI
Sbjct: 422 RTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGAHCYVNSVSLIDRVARI 481
Query: 128 LFPASFGLLNLFYWISYITDQENFVWKD 155
FP SF LNL YW +Y ++ F W +
Sbjct: 482 AFPMSFAFLNLLYWWAYGMYKKEFSWSN 509
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 25/30 (83%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL 30
MSF YCIAT+LEFA VHYFTK GSGE P L
Sbjct: 282 MSFLYCIATLLEFAGVHYFTKLGSGESPQL 311
>gi|325296907|ref|NP_001191487.1| GABA A receptor alpha subunit precursor [Aplysia californica]
gi|17225111|gb|AAL37252.1|AF322878_1 GABA A receptor alpha subunit [Aplysia californica]
Length = 448
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 19/147 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + IAT +EFA VHYFTK G+ E P ++SSDE S V E ED T++ +
Sbjct: 310 LCFVFVIATTIEFAVVHYFTKFGTEE-PMVLSSDE-------DSSVEEISED-NTSLDSL 360
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKY---RKKREQEVSREGYQFHINS 117
++ +++ P V+ +V ++A + R K + + NS
Sbjct: 361 TLEN---GKFKVHNYPWPPGEVNV----KVGILAKLCHCLTRTKDGRGRMKGKLSMFSNS 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISY 144
VS++DR +R+LFP +F +LN+ Y +SY
Sbjct: 414 VSQVDRAARVLFPLTFTVLNVIYCVSY 440
>gi|198456094|ref|XP_002136382.1| GA27751 [Drosophila pseudoobscura pseudoobscura]
gi|198142754|gb|EDY71472.1| GA27751 [Drosophila pseudoobscura pseudoobscura]
Length = 93
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 73 RTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE----GYQF-HINSVSKIDRVSRI 127
RT + P ++ ++ + L +++++RK+RE++ + E G+ ++NSVS IDR +RI
Sbjct: 3 RTTQTEPPVISRMRQIWLCLKSDDQFRKQRERDAAAEKTEQGHNVSYVNSVSLIDRFARI 62
Query: 128 LFPASFGLLNLFYWISYITDQENFVW 153
FP SF L NL YW++Y ++ F W
Sbjct: 63 AFPMSFVLFNLLYWLAYGMYKKEFSW 88
>gi|443716698|gb|ELU08089.1| hypothetical protein CAPTEDRAFT_148069 [Capitella teleta]
Length = 442
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 46/159 (28%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M + + AT++EFA VHYFTKT S + ++P S + E H
Sbjct: 304 MCYLFVTATLIEFAIVHYFTKTDSKD----------DIYPTSGSDSESENEIPACPYHSF 353
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ-----FH- 114
+ IR+ +CP+ Q +++RK++E+ + + ++ +H
Sbjct: 354 Q---------PIRSEGLCPHHRQQ-----------QRHRKRKEESLLMKFWKCLQGSYHY 393
Query: 115 ----------INSVSKIDRVSRILFPASFGLLNLFYWIS 143
+NS+S+ID++SR LFP SF LN+ YWIS
Sbjct: 394 RKAMARRATGVNSLSRIDKISRTLFPFSFIFLNVIYWIS 432
>gi|195131085|ref|XP_002009981.1| GI14943 [Drosophila mojavensis]
gi|193908431|gb|EDW07298.1| GI14943 [Drosophila mojavensis]
Length = 592
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 73 RTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE----GYQF--HINSVSKIDRVSR 126
RT + P V ++ + L + K+R++RE++ + E G Q ++NS+S IDRV+R
Sbjct: 501 RTTQTEPPAVSRMRQMWLCLKGDVKFRRQRERDAAAEKSVQGRQGAGYVNSISLIDRVAR 560
Query: 127 ILFPASFGLLNLFYWISYITDQENFVW 153
+ FP +F L NL YW++Y ++ F W
Sbjct: 561 VAFPMTFALFNLLYWLAYGMYKKEFSW 587
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 25/28 (89%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIP 28
MSF YCIAT+LEFA VHYFTK GSGEIP
Sbjct: 378 MSFLYCIATLLEFAGVHYFTKLGSGEIP 405
>gi|405950124|gb|EKC18128.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Crassostrea
gigas]
Length = 431
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 32/157 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEI----PFLVSSDEIRV----HPHPKSYVSEDEED 52
M F + ++T+++FA VH FTK G + P++ SSD+ V HP P++ +E
Sbjct: 296 MCFIFVLSTLVQFAIVHLFTKKGHSDTCTSPPYVDSSDDENVPFSRHPRPRT--AERIAS 353
Query: 53 EQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
+ N++K +V V + + ++ K++ + Q+ +
Sbjct: 354 VEQNVYKNRV------------------FVTRKESRMKVWFSSLKFKGHKSQKRGHD--- 392
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVS+ID+V R FP +F +LN+ YW Y+T +E
Sbjct: 393 -EANSVSQIDKVCRCAFPITFVILNIAYWSFYLTRKE 428
>gi|301607834|ref|XP_002933509.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Xenopus (Silurana) tropicalis]
Length = 773
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + I K
Sbjct: 644 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVIKKN-- 687
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + PNI + ++ A K + QE + NSVSKID
Sbjct: 688 -----NAYAVAVANYAPNITKDSALPTISKSATADPNKAKPQEAKKT-----FNSVSKID 737
Query: 123 RVSRILFPASFGLLNLFYWISYITDQ 148
R+SRI+FP FG NL YW +Y+ +
Sbjct: 738 RMSRIVFPLLFGTFNLVYWATYLNRE 763
>gi|147902924|ref|NP_001087431.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2 precursor
[Xenopus laevis]
gi|50925068|gb|AAH79777.1| MGC86282 protein [Xenopus laevis]
Length = 451
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + I K
Sbjct: 322 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSIVNDKKKEKASVIKKN-- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + PNI + ++ A K + QE + NSVSKID
Sbjct: 366 -----NAYAVAVANYAPNITKDSALPTISKSATADPNKAKPQEAKKT-----FNSVSKID 415
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRI+FP FG NL YW +Y+
Sbjct: 416 RMSRIVFPLLFGTFNLVYWATYL 438
>gi|449273443|gb|EMC82937.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Columba livia]
Length = 455
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + I K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVIKKNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V P I +T E N E + QE + NSVSK
Sbjct: 367 YAVAVANYAPNITKDSVLPTISKSATTAEPNKAKPEA----KPQEAKKT-----FNSVSK 417
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPT 158
IDR+SRI+FP FG NL YW +Y+ + + P T
Sbjct: 418 IDRMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST 455
>gi|224049939|ref|XP_002194342.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Taeniopygia guttata]
Length = 455
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + I K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVIKKNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V P I +T E N E + QE + NSVSK
Sbjct: 367 YAVAVANYAPNITKDSVLPTISKSATTAEPNKAKPEA----KPQEAKKT-----FNSVSK 417
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPT 158
IDR+SRI+FP FG NL YW +Y+ + + P T
Sbjct: 418 IDRMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST 455
>gi|307206611|gb|EFN84593.1| Gamma-aminobutyric acid receptor alpha-like [Harpegnathos saltator]
Length = 339
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 29/178 (16%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSS---------DEIRVHPHPKSYVSEDEE 51
+SF + ATI++FA VHYFTK GSGE F +E+ K+ + +
Sbjct: 151 LSFAFIFATIIQFAVVHYFTKYGSGECYFSSDLSDTDSSSEEEEMARGRRVKNQAARRKS 210
Query: 52 DEQTNIHKIKVDYRVCSVYEIRTLKVCP----NIVD---------QLSTDEVNLVAN--- 95
+ + R ++ ++V P +I D Q+S +
Sbjct: 211 SASSGVRGPTRGGRNFTMNGDGMIEVIPLSAISIPDRDPAMGPHWQISCVTCSPPPRQPP 270
Query: 96 ----EKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
K R E R NSVSKIDR SR++FP F +NLFYW +Y++ E
Sbjct: 271 PPPPSKRTTPRPGEKRRRRRTPRYNSVSKIDRASRVVFPLFFLAINLFYWYAYLSRSE 328
>gi|157109224|ref|XP_001650578.1| hypothetical protein AaeL_AAEL015091 [Aedes aegypti]
gi|108868461|gb|EAT32686.1| AAEL015091-PA [Aedes aegypti]
Length = 58
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 103 EQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
+ + G H+NSVS ID+ +R+LFPASF N+ YW+ Y T Q +F W
Sbjct: 2 SARLCKRGASRHVNSVSLIDQAARVLFPASFTFFNVLYWLCYYTYQADFTW 52
>gi|189442719|gb|AAI67647.1| LOC100170583 protein [Xenopus (Silurana) tropicalis]
Length = 499
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + I K
Sbjct: 370 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVIKKN-- 413
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + PNI + ++ A K + QE + NSVSKID
Sbjct: 414 -----NAYAVAVANYAPNITKDSALPTISKSATADPNKAKPQEAKKT-----FNSVSKID 463
Query: 123 RVSRILFPASFGLLNLFYWISYITDQ 148
R+SRI+FP FG NL YW +Y+ +
Sbjct: 464 RMSRIVFPLLFGTFNLVYWATYLNRE 489
>gi|348528649|ref|XP_003451829.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oreochromis niloticus]
Length = 455
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 27/149 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ +++ + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVTDKKKERASIVKKNNA 366
Query: 63 DYRVCSVYEIRTLK---VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ Y K P I +TD A+ K ++ ++ NSVS
Sbjct: 367 YAVAVANYAPNVTKDSSTLPTIAKGGATDPNKPKADGKAQESKKT----------FNSVS 416
Query: 120 KIDRVSRILFPASFGLLNLFYWISYITDQ 148
KIDR+SRILFP FG+ NL YW +Y+ +
Sbjct: 417 KIDRLSRILFPVLFGIFNLVYWATYLNKE 445
>gi|118090558|ref|XP_001233850.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Gallus
gallus]
Length = 456
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ + E+ ++ K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKPKKEKASVIKKNN 366
Query: 63 DYRVCSVY---EIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
Y V I V P I +T E N E + QE + NSVS
Sbjct: 367 AYAVAVANYAPNITKDSVLPTISKSATTAEPNKAKPEA----KPQEAKKT-----FNSVS 417
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KIDR+SRI+FP FG NL YW +Y+
Sbjct: 418 KIDRMSRIVFPVLFGTFNLVYWATYL 443
>gi|357606120|gb|EHJ64924.1| cys-loop ligand-gated ion channel subunit [Danaus plexippus]
Length = 270
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEI 27
MSFFYCIAT+LEFA VHYFTK GSGEI
Sbjct: 149 MSFFYCIATLLEFAGVHYFTKVGSGEI 175
>gi|307200308|gb|EFN80573.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Harpegnathos
saltator]
Length = 468
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 25/29 (86%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF 29
MSF YCIAT+LEFA VHYFTK GSGEIP
Sbjct: 378 MSFGYCIATLLEFAGVHYFTKVGSGEIPL 406
>gi|149620175|ref|XP_001521784.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Ornithorhynchus anatinus]
Length = 393
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G +R P K E+ ++ K
Sbjct: 258 YAFVFSALIEFATVNYFTKRGWA----WDGKSRLRASPQKK---------EKASVMK--- 301
Query: 63 DYRVCSVYEIRTLKVCPNIVD--QLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y + PNI L+T N VA+ + KK E + + F NSVSK
Sbjct: 302 ---KNNAYAVAVANYAPNIAKDPALATVSKN-VASAEPGKKPEGKPAEAKKTF--NSVSK 355
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPT 158
IDR+SRI+FP FG NL YW +Y+ + + P T
Sbjct: 356 IDRMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST 393
>gi|432880407|ref|XP_004073682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oryzias latipes]
Length = 455
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS VSE +++ + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVSEKKKERASVMKKN-- 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + PNI ST K + E + + NSVSKID
Sbjct: 365 -----NAYAVAVANYAPNIAKDSSTLPTIAKGGAIDPSKPKLEGKAQESKKTFNSVSKID 419
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRI+FP FG NL YW +Y+
Sbjct: 420 RMSRIMFPVLFGTFNLVYWATYL 442
>gi|47212408|emb|CAF92023.1| unnamed protein product [Tetraodon nigroviridis]
Length = 415
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V + +++ + I K
Sbjct: 283 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVIDKKKERSSIIKKN-- 326
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDE--VNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y + PNI ST A+E + K E + F NSVSK
Sbjct: 327 -----NAYAVAVANYAPNITKDSSTLPTIAKAGASEPNKAKAEGKAPENKKTF--NSVSK 379
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRILFP FG NL YW +Y+
Sbjct: 380 IDRMSRILFPVLFGSFNLVYWATYL 404
>gi|17737617|ref|NP_524131.1| glycine receptor [Drosophila melanogaster]
gi|57012755|sp|Q24352.1|GBRAL_DROME RecName: Full=Gamma-aminobutyric acid receptor alpha-like; AltName:
Full=GABA(A) receptor alpha-like and glycine
receptor-like subunit of Drosophila; Short=GRD; Flags:
Precursor
gi|860919|emb|CAA55144.1| Grd [Drosophila melanogaster]
gi|23093210|gb|AAF49298.2| glycine receptor [Drosophila melanogaster]
gi|330864859|gb|AEC46885.1| MIP30648p [Drosophila melanogaster]
Length = 686
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 623 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 682
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 17/81 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHY+TK GSGE F++ +E+ D E ++ +
Sbjct: 460 LSFGFIFATILQFAVVHYYTKYGSGECYFII--EEL------------DSESGESETEPL 505
Query: 61 KVDYRVCS---VYEIRTLKVC 78
D+R + +YE+ L +C
Sbjct: 506 TSDFRGSTESKIYEVIPLSMC 526
>gi|195328481|ref|XP_002030943.1| GM25721 [Drosophila sechellia]
gi|194119886|gb|EDW41929.1| GM25721 [Drosophila sechellia]
Length = 690
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 627 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 686
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 17/81 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHY+TK GSGE F++ +E+ D E ++ +
Sbjct: 464 LSFGFIFATILQFAVVHYYTKYGSGECYFII--EEL------------DSESGESETEPL 509
Query: 61 KVDYRVCS---VYEIRTLKVC 78
D+R + +YE+ L +C
Sbjct: 510 TSDFRGSTESKIYEVIPLSMC 530
>gi|198466281|ref|XP_001353953.2| GA20358 [Drosophila pseudoobscura pseudoobscura]
gi|198150528|gb|EAL29689.2| GA20358 [Drosophila pseudoobscura pseudoobscura]
Length = 718
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ +
Sbjct: 656 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLSRSARILANTQ 715
Query: 157 PT 158
P+
Sbjct: 716 PS 717
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ + D + +T
Sbjct: 479 LSFAFIFATILQFAVVHYFTKYGSGECYFIIEE------------MDSDSAETETEAPSD 526
Query: 61 KVDYRVCSVYEIRTLKVC 78
D +YE+ L +C
Sbjct: 527 FRDSTESKIYEVIPLSMC 544
>gi|195494720|ref|XP_002094959.1| GE19930 [Drosophila yakuba]
gi|194181060|gb|EDW94671.1| GE19930 [Drosophila yakuba]
Length = 690
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 627 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 686
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLV 31
+SF + ATIL+FA VHY+TK GSGE F++
Sbjct: 464 LSFGFIFATILQFAVVHYYTKYGSGECYFII 494
>gi|195591181|ref|XP_002085321.1| GD14728 [Drosophila simulans]
gi|194197330|gb|EDX10906.1| GD14728 [Drosophila simulans]
Length = 690
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 627 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 686
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 17/81 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHY+TK GSGE F++ +E+ D E ++ +
Sbjct: 464 LSFGFIFATILQFAVVHYYTKYGSGECYFII--EEL------------DSESGESETEPL 509
Query: 61 KVDYRVCS---VYEIRTLKVC 78
D+R + +YE+ L +C
Sbjct: 510 TSDFRGSTESKIYEVIPLSMC 530
>gi|432850188|ref|XP_004066746.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Oryzias latipes]
Length = 467
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + + HPK + N+ V
Sbjct: 333 YAFVFSALIEFATVNYFTKRS-----WAWDGKKAMEAQHPKKRDPMVLSKKPNNVCSAGV 387
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+Y PN+ ++ ++ ++N + R E + NSVSKID
Sbjct: 388 NY-------------TPNLTKDVA---ISTISNTTSVQLRGTESKAADPKKTYNSVSKID 431
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 432 KMSRIVFPVLFGTFNLVYWATYL 454
>gi|195166535|ref|XP_002024090.1| GL22849 [Drosophila persimilis]
gi|194107445|gb|EDW29488.1| GL22849 [Drosophila persimilis]
Length = 742
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++
Sbjct: 656 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLS 705
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ + D + +T
Sbjct: 479 LSFAFIFATILQFAVVHYFTKYGSGECYFIIEE------------MDSDSAETETEAPSD 526
Query: 61 KVDYRVCSVYEIRTLKVC 78
D +YE+ L +C
Sbjct: 527 FRDSTESKIYEVIPLSMC 544
>gi|410913417|ref|XP_003970185.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Takifugu rubripes]
Length = 454
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V + +++ + I K
Sbjct: 320 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVIDKKKERSSVIKKN-- 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + PNI ST A K + E + NSVSKID
Sbjct: 364 -----NAYAVAVANYAPNINKDSSTLPTIAKAGAADPNKAKAEGKAPENKKTFNSVSKID 418
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRILFP FG NL YW +Y+
Sbjct: 419 RMSRILFPVLFGSFNLVYWATYL 441
>gi|348506866|ref|XP_003440978.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Oreochromis niloticus]
Length = 477
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + + HPK + N+ V
Sbjct: 343 YAFVFSALIEFATVNYFTKRS-----WAWDGKKAMEAQHPKKRDPMVLSKKPNNVCSAGV 397
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+Y PN+ S ++ ++N R E + NSVSKID
Sbjct: 398 NY-------------TPNLTKDTS---ISTISNTTSVHLRSAETKTMDPKKTYNSVSKID 441
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 442 KMSRIVFPVLFGTFNLVYWATYL 464
>gi|395542841|ref|XP_003773333.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Sarcophilus harrisii]
Length = 454
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMKKNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNITKDPVLSTISKSATTAETN--------KKPEGKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPT 158
IDR+SRI+FP FG NL YW +Y+ + + P T
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST 454
>gi|126331783|ref|XP_001372457.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Monodelphis domestica]
Length = 454
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMKKNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNITKDPVLSTISKSATTAETN--------KKPEGKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|410906149|ref|XP_003966554.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Takifugu rubripes]
Length = 436
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + + HPK + N+ V
Sbjct: 302 YAFVFSALIEFATVNYFTKRS-----WAWDGKKALEAQHPKKRDPMVLSKKPNNVCSAGV 356
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+Y N+ +S ++ ++N + R E + NSVSKID
Sbjct: 357 NYTA-------------NLTKDMS---ISTISNTTSVQLRASETKMADPKKTYNSVSKID 400
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 401 KMSRIVFPVLFGTFNLVYWATYL 423
>gi|149031469|gb|EDL86449.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5, isoform
CRA_a [Rattus norvegicus]
Length = 413
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 277 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 321
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSK 120
+ + + L PNI +QL N V R E+ S++ Y NS+SK
Sbjct: 322 --KSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKTY----NSISK 375
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
ID++SRI+FP FG NL YW +Y+
Sbjct: 376 IDKMSRIVFPILFGTFNLVYWATYL 400
>gi|149691057|ref|XP_001493219.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Equus
caballus]
Length = 463
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K V + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKASEAAK--VKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + Y + PNI + T L A+ K E++ S + NS+SKID
Sbjct: 373 --KSTNAYTTGKMTHAPNIPKE-QTPAGTLNASSVSVKPSEEKTSENKKTY--NSISKID 427
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 428 KMSRIVFPVLFGTFNLVYWATYL 450
>gi|195440586|ref|XP_002068121.1| GK12418 [Drosophila willistoni]
gi|194164206|gb|EDW79107.1| GK12418 [Drosophila willistoni]
Length = 718
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 656 FYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLSRSSRILANTP 715
Query: 157 PT 158
+
Sbjct: 716 TS 717
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ + D D +T
Sbjct: 491 LSFAFIFATILQFAVVHYFTKYGSGECYFIIEE------------MDTDSADSETERQSD 538
Query: 61 KVDYRVCSVYEIRTLKVC 78
D +YE+ L +C
Sbjct: 539 FRDSTESKIYEVIPLSMC 556
>gi|204212|gb|AAC42033.1| GABA-A receptor alpha-5 subunit [Rattus norvegicus]
Length = 464
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSK 120
+ + + L PNI +QL N V R E+ S++ Y NS+SK
Sbjct: 373 --KSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKTY----NSISK 426
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
ID++SRI+FP FG NL YW +Y+
Sbjct: 427 IDKMSRIVFPILFGTFNLVYWATYL 451
>gi|120764|sp|P19969.1|GBRA5_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|149031470|gb|EDL86450.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5, isoform
CRA_b [Rattus norvegicus]
Length = 464
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSK 120
+ + + L PNI +QL N V R E+ S++ Y NS+SK
Sbjct: 373 --KSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKTY----NSISK 426
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
ID++SRI+FP FG NL YW +Y+
Sbjct: 427 IDKMSRIVFPILFGTFNLVYWATYL 451
>gi|25742787|ref|NP_058991.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Rattus
norvegicus]
gi|56180|emb|CAA36248.1| GABA-A receptor [Rattus norvegicus]
Length = 464
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSK 120
+ + + L PNI +QL N V R E+ S++ Y NS+SK
Sbjct: 373 --KSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKTY----NSISK 426
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
ID++SRI+FP FG NL YW +Y+
Sbjct: 427 IDKMSRIVFPILFGTFNLVYWATYL 451
>gi|149535755|ref|XP_001515310.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like,
partial [Ornithorhynchus anatinus]
Length = 170
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 35 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 78
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y T PNI + + L K +EV E + NSV
Sbjct: 79 N----NTYAAATASYTPNI----ARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 130
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENF 151
SKIDR+SRI FP FG+ NL YW +Y+ +
Sbjct: 131 SKIDRLSRIAFPLLFGIFNLVYWATYLNREPQL 163
>gi|195128399|ref|XP_002008651.1| GI11695 [Drosophila mojavensis]
gi|193920260|gb|EDW19127.1| GI11695 [Drosophila mojavensis]
Length = 710
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++
Sbjct: 648 FYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLS 697
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ + D + +T++
Sbjct: 474 LSFGFIFATILQFAVVHYFTKYGSGECYFIIEE------------LDTDSAESETDVDAS 521
Query: 61 -KVDYRVCS---VYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSR 108
+ D+R S +YE+ L +C + + ++ + + + R + R
Sbjct: 522 GQSDFRGSSESKIYEVIPLSMCAISMPASGGSRLGMLHSRRTTRNRRHGLGR 573
>gi|326919234|ref|XP_003205887.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Meleagris gallopavo]
Length = 529
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G V +D+ S + ++ +
Sbjct: 392 YAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKIKKKEKASVIKKNNAYAVAVANYAP- 450
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
I V P I +T E N E + QE + NSVSKID
Sbjct: 451 --------NITKDSVLPTISKSATTAEPNKAKPEA----KPQEAKKT-----FNSVSKID 493
Query: 123 RVSRILFPASFGLLNLFYWISYITDQENFVWKDPPT 158
R+SRI+FP FG NL YW +Y+ + + P T
Sbjct: 494 RMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST 529
>gi|73950993|ref|XP_545805.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Canis
lupus familiaris]
Length = 463
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K V + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKASEAAK--VKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + Y + PNI + T V A+ K E++ S + NS+SKID
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKE-QTPAVTSNASSASVKPSEEKTSENKKTY--NSISKID 427
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 428 KMSRIVFPVLFGTFNLVYWATYL 450
>gi|449275750|gb|EMC84518.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Columba livia]
Length = 463
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 30/148 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEED-EQTNIHKIK 61
+ + + ++EFA V+YFTK +S+ + ++ E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKALEAAKIKKKE 366
Query: 62 VDY---RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
D + + Y + PN+ + ++ A+ + E+ S++ Y NS
Sbjct: 367 RDLLGNKSTNTYSTGKMTPAPNMPKDSAPSVISNAASAPVKSAEEKPAESKKTY----NS 422
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
+SKID++SRI+FP FG NL YW +Y+
Sbjct: 423 ISKIDKMSRIIFPVLFGTFNLVYWATYL 450
>gi|195022006|ref|XP_001985499.1| GH17092 [Drosophila grimshawi]
gi|193898981|gb|EDV97847.1| GH17092 [Drosophila grimshawi]
Length = 707
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 645 FYRREELEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLSRSSRILANAP 704
Query: 157 PT 158
+
Sbjct: 705 TS 706
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ E S+ E E
Sbjct: 472 LSFGFIFATILQFAVVHYFTKYGSGECYFIIEELE-----------SDSGESETDVDASG 520
Query: 61 KVDYRVCS---VYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSR 108
+ D+R S +YE+ L +C + S + ++ + + + R ++R
Sbjct: 521 QSDFRGSSESKIYEVIPLSMCAINMPPSSGSRLGMLHSRRTTRNRRHGLTR 571
>gi|241680550|ref|XP_002411571.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
gi|215504306|gb|EEC13800.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
Length = 377
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + ATI+EFA VHYFTK VS E R+ +S + + ++
Sbjct: 252 IGFGFVFATIVEFAIVHYFTK---------VSLKEGRII-----RISTTRRERSPVMTRL 297
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
R T P +T + +Y + + Q + INSVSK
Sbjct: 298 PRTQRTRKTTTPMTRTRIPGRATNPTT------VDSRYLEGKGQI-----QELWINSVSK 346
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQE 149
ID+VSR++FP +F + N+ YW++Y + E
Sbjct: 347 IDKVSRVVFPLTFIVTNVVYWLTYFKEDE 375
>gi|195379266|ref|XP_002048401.1| GJ11370 [Drosophila virilis]
gi|194155559|gb|EDW70743.1| GJ11370 [Drosophila virilis]
Length = 633
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 571 FYRREELEARRKGKRTPQYNSVSKIDRASRIVFPLLFFLINVFYWYGYLSRSSRILANTP 630
Query: 157 PT 158
+
Sbjct: 631 TS 632
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+SF + ATIL+FA VHYFTK GSGE F++ E S+ E E
Sbjct: 400 LSFGFIFATILQFAVVHYFTKYGSGECYFIIEELE-----------SDSAESETDADASG 448
Query: 61 KVDYRVCS---VYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
+ D+R S +YE+ L +C + + + ++ + + + R ++ G+ F
Sbjct: 449 QSDFRGSSESKIYEVIPLSMCAINMPASGSSRLGMLHSRRTTRNRRHGLT--GFSF 502
>gi|443710633|gb|ELU04795.1| hypothetical protein CAPTEDRAFT_3932 [Capitella teleta]
Length = 432
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 34/150 (22%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + +A I++FA VH+FTK G+ + P+ V + + N H+
Sbjct: 304 FAFVLAAIIQFAGVHFFTKHGTPR------------NGDPQRPVHTQQPVRRRNPHQ--- 348
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEV------NLVANEKYRKKREQEVSREGYQFHIN 116
I T P+ V ++ + L+ + YR + + ++ +N
Sbjct: 349 --------RISTTAQLPSHVTPITKESCLSKFWHCLIGSSHYRTMKLLQSTQR-----VN 395
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SVS IDR +R LFP F ++FYW SY++
Sbjct: 396 SVSSIDRTARALFPFLFVSFHVFYWTSYLS 425
>gi|47217918|emb|CAG06524.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + + HPK + N+ +
Sbjct: 287 YAFVFSALIEFATVNYFTKRS-----WAWDGKKALEAQHPKKRDPMVLSKKPNNVCSAGI 341
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+Y N+ +S ++ ++N + R E + NSVSKID
Sbjct: 342 NYTA-------------NLTKDMS---ISTISNTTSVQLRAAETKMVDPKKTYNSVSKID 385
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 386 KMSRIVFPVLFGTFNLVYWATYL 408
>gi|348571818|ref|XP_003471692.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
isoform 2 [Cavia porcellus]
Length = 452
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ + E+ ++
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKPKKEKASVMIQNN 366
Query: 63 DYRVCSVYEIRTLK---VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
Y V L V I +T E N KK E + + F NSVS
Sbjct: 367 AYAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVS 416
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KIDR+SRI+FP FG NL YW +Y+
Sbjct: 417 KIDRMSRIVFPVLFGTFNLVYWATYL 442
>gi|149703013|ref|XP_001496146.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Equus
caballus]
Length = 451
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 28/146 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V+ D++ E+T++
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVN-DKKKEKTSVMIQNN 365
Query: 63 DYRVCSVYEIRTLK---VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
Y V L V I +T E N KK E + + F NSVS
Sbjct: 366 AYAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVS 415
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KIDR+SRI+FP FG NL YW +Y+
Sbjct: 416 KIDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|351699523|gb|EHB02442.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Heterocephalus
glaber]
Length = 463
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELKLN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQ---LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + Y + PNI + T V+ V+ + +K + S++ Y NS+S
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKEQIPAGTSNVSTVSVKSSEEKMAE--SKKTY----NSIS 424
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 425 KIDKMSRIIFPVLFGTFNLVYWATYL 450
>gi|224068169|ref|XP_002193432.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Taeniopygia guttata]
gi|449475088|ref|XP_004175463.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Taeniopygia guttata]
Length = 455
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 23/155 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKNN 366
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVAN-EKYRKKREQEVSREGYQFHINSVSKI 121
Y + PNI + A E K E + + F NSVSKI
Sbjct: 367 TYTAAAT------SYTPNIARDPGLATIAKSATIEPKEVKPETKPAEPKKTF--NSVSKI 418
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
DR+SRI FP FG+ NL YW +Y+ + + P
Sbjct: 419 DRLSRIAFPLLFGIFNLVYWATYLNREPQLKVQTP 453
>gi|226135|prf||1411303A GABA receptor alpha2
Length = 452
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V+ D++ E+ ++
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVN-DKKKEKASVMIQNN 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
Y V L P LST + + KK E + + F NSVSKID
Sbjct: 366 AYAVAVANYAPNLSKDP----VLSTISKSATTTPEPNKKPENKPAEAKKTF--NSVSKID 419
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRI+FP FG NL YW +Y+
Sbjct: 420 RMSRIVFPVLFGTFNLVYWATYL 442
>gi|158260607|dbj|BAF82481.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P EE ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EEPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|444516736|gb|ELV11269.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Tupaia chinensis]
Length = 430
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTG---SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHK 59
+ + + ++EFA V+YFTK G G+ +S+ R+ + + + T+
Sbjct: 296 YAFVFSALIEFATVNYFTKRGWAWDGK----KASEAARIKKKERELLLSKSTNALTS--- 348
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ PNI + + + ++ R + + S++ Y NS+S
Sbjct: 349 -------------GKMTHPPNIPKEQTPAGTSNASSVSVRPEEKTSESKKTY----NSIS 391
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID+VSR++FP FG NL YW +Y+
Sbjct: 392 KIDKVSRVVFPVLFGTFNLIYWATYL 417
>gi|46048945|ref|NP_989649.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Gallus
gallus]
gi|326928316|ref|XP_003210326.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Meleagris gallopavo]
gi|120753|sp|P19150.1|GBRA1_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|62901|emb|CAA38148.1| precursor peptide [Gallus gallus]
gi|228541|prf||1805342A GABA receptor A:SUBUNIT=alpha1
Length = 455
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKNN 366
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVAN-EKYRKKREQEVSREGYQFHINSVSKI 121
Y + PNI + A E K E + + F NSVSKI
Sbjct: 367 TYTAAAT------SYTPNIARDPGLATIAKSATIEPKEVKPETKPAEPKKTF--NSVSKI 418
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
DR+SRI FP FG+ NL YW +Y+
Sbjct: 419 DRLSRIAFPLLFGIFNLVYWATYL 442
>gi|209413778|ref|NP_001129251.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Rattus
norvegicus]
Length = 452
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ + E+ ++
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKPKKEKGSVMIQNN 366
Query: 63 DYRVCSVYEIRTLK---VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
Y V L V I +T E N KK E + + F NSVS
Sbjct: 367 AYAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVS 416
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KIDR+SRI+FP FG NL YW +Y+
Sbjct: 417 KIDRMSRIVFPVLFGTFNLVYWATYL 442
>gi|426248011|ref|XP_004017759.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Ovis
aries]
Length = 462
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELKIN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + Y + PNI + + ++ + + + +++ Y NS+SKID
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKEQTPAGTTNASSASVKPEDKTSENKKTY----NSISKID 426
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 427 KMSRIIFPLLFGTFNLVYWATYL 449
>gi|449267233|gb|EMC78199.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Columba livia]
Length = 455
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKIKDPLIKKNN 366
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVAN-EKYRKKREQEVSREGYQFHINSVSKI 121
Y + PNI + A E K E + + F NSVSKI
Sbjct: 367 TYTAAAT------SYTPNIARDPGLATIAKSATIEPKEVKPETKPAEPKKTF--NSVSKI 418
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
DR+SRI FP FG+ NL YW +Y+
Sbjct: 419 DRLSRIAFPLLFGIFNLVYWATYL 442
>gi|344257366|gb|EGW13470.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Cricetulus
griseus]
Length = 465
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + + N
Sbjct: 330 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELKLN------ 374
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ + + L PNI +QL N + + + S++ Y NS+SKI
Sbjct: 375 --KSTNAFTTGKLTHPPNIPKEQLPGGSGNASSASVKPSEEKTAESKKTY----NSISKI 428
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 429 DKMSRIVFPILFGTFNLVYWATYL 452
>gi|410960757|ref|XP_003986954.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Felis
catus]
Length = 371
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E + K +
Sbjct: 237 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKASEAAKVKKERE 276
Query: 62 -VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ + + Y + PNI + T A+ K E++ S + NS+SK
Sbjct: 277 LILSKSTNAYTTGKMTHPPNIPKE-QTPAGTSNASSASVKPSEEKTSENKKTY--NSISK 333
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
ID++SRI+FP FG NL YW +Y+ + PP
Sbjct: 334 IDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAAPP 370
>gi|292620121|ref|XP_683856.4| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 524
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + +D++ + V+++++ +T++ K
Sbjct: 387 YAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKV-------TMVTQNKK--ETSVMKKN- 436
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + P+I + V+ A + K Q V++E + NSVSKID
Sbjct: 437 -----NAYAVAVANYAPHIAKDSALPTVSKSATPEPSKA--QPVAKETKK-TFNSVSKID 488
Query: 123 RVSRILFPASFGLLNLFYWISYITDQ 148
R+SRI+FP FG NL YW +Y+ +
Sbjct: 489 RMSRIIFPVLFGSFNLVYWATYLNRE 514
>gi|354488285|ref|XP_003506301.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Cricetulus griseus]
Length = 463
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELKLN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ + + L PNI +QL N + + + S++ Y NS+SKI
Sbjct: 373 --KSTNAFTTGKLTHPPNIPKEQLPGGSGNASSASVKPSEEKTAESKKTY----NSISKI 426
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 427 DKMSRIVFPILFGTFNLVYWATYL 450
>gi|126291410|ref|XP_001380023.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Monodelphis domestica]
Length = 456
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PNI + + L K +EV E + NSV
Sbjct: 365 N----NTYAATATSYTPNI----ARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
SKIDR+SRI FP FG+ NL YW +Y+ + +P
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPNP 454
>gi|327260701|ref|XP_003215172.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Anolis carolinensis]
Length = 457
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIMKNN 366
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + PNI + A + ++ + + E + NSVSKID
Sbjct: 367 SFTAPAT----ATSFTPNIARDPGLATIAKSATIEPKEGKPETKPPEPKK-TFNSVSKID 421
Query: 123 RVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
R+SRI FP FG+ NL YW +Y+ + + PP
Sbjct: 422 RLSRIAFPLLFGIFNLVYWATYLNREPRLKDQSPP 456
>gi|348552636|ref|XP_003462133.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Cavia porcellus]
Length = 601
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + + N +
Sbjct: 328 YAFVFSALIEFATVNYFTKRGW-------AWDGKKALEAAK--IKKKERELKLNKY---- 374
Query: 63 DYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ Y + PNI +Q N A + + S++ Y NS+SKI
Sbjct: 375 -----NAYTTGKMTHPPNIPKEQTPAGTANASAVPVKSSEEKTPESKKTY----NSISKI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQ 148
D++SRI+FP FG NL YW +Y+ +
Sbjct: 426 DKMSRIVFPVLFGTFNLVYWATYLNRE 452
>gi|311245120|ref|XP_003121696.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Sus scrofa]
Length = 463
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELTLN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ + Y + PNI +Q S N A+ K E + S + NS+SKI
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKEQTSAGTSN--ASSVSVKPSEDKTSENKKTY--NSISKI 426
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 427 DKMSRIIFPVLFGTFNLVYWATYL 450
>gi|432098880|gb|ELK28375.1| Gamma-aminobutyric acid receptor subunit alpha-1, partial [Myotis
davidii]
Length = 425
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 290 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLMKKNN 335
Query: 63 DYR-VCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + Y + P + + + K+ + EV + NSVSKI
Sbjct: 336 TYAPTATSYTPNMARGDPGLATIAKSATIE-------PKEVKPEVKPPEPKKTFNSVSKI 388
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
DR+SRI FP FG+ NL YW +Y+
Sbjct: 389 DRLSRIAFPLLFGIFNLVYWATYL 412
>gi|115495909|ref|NP_001069312.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Bos
taurus]
gi|122132467|sp|Q08E50.1|GBRA5_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|115304763|gb|AAI23419.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Bos taurus]
gi|296475587|tpg|DAA17702.1| TPA: gamma-aminobutyric acid receptor subunit alpha-5 precursor
[Bos taurus]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELTIN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + Y + PNI + + ++ + + + +++ Y NS+SKID
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKEQTPAGTTNASSASVKPEDKASENKKTY----NSISKID 426
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 427 KMSRIIFPLLFGTFNLVYWATYL 449
>gi|344298011|ref|XP_003420688.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Loxodonta africana]
Length = 463
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKASEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSKI 121
+ + Y + PNI + + + ++ + E+ S++ Y NSVSKI
Sbjct: 373 --KSTNAYTTGKMAHPPNIPKEQTPAGTSNASSASVKSPEEKTSESKKTY----NSVSKI 426
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 427 DKMSRIVFPVLFGTFNLVYWATYL 450
>gi|301772920|ref|XP_002921879.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Ailuropoda melanoleuca]
gi|281353486|gb|EFB29070.1| hypothetical protein PANDA_010810 [Ailuropoda melanoleuca]
Length = 463
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K V + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKASEAAK--VKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + Y + PNI + T A+ K E++ S + NS+SKID
Sbjct: 373 --KSTNAYTTGKMTHPPNIPKE-QTPAGTSNASSASVKPSEEKTSENKKTY--NSISKID 427
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 428 KMSRIVFPVLFGTFNLVYWATYL 450
>gi|334311427|ref|XP_003339614.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Monodelphis domestica]
Length = 439
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 40/157 (25%)
Query: 3 FFYCIATILEFAAVHYFT------------KTGSGEIPFLVSSDEIRVHPHPKSYVSEDE 50
F + + ++EFAAV+YFT +T +P + DEI +HP
Sbjct: 300 FAFVFSALIEFAAVNYFTNLQNQRTMQKVSRTALPSVPTVPVEDEIVLHP---------- 349
Query: 51 EDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEV-NLVANEKYRKKREQEVSRE 109
+ N+ K RV S+ + +L + EV N++A +
Sbjct: 350 -ESNFNLKK-----RVNSL-----------TLPKLQSQEVKNVLARAPNSQLMSAIPPPL 392
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YWI Y++
Sbjct: 393 PPPAAIGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 429
>gi|75061683|sp|Q5R6B2.1|GBRA1_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|55731991|emb|CAH92704.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LAGGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLIYWATYL 443
>gi|27806981|ref|NP_776966.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Bos
taurus]
gi|120756|sp|P10063.1|GBRA2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|369|emb|CAA30924.1| unnamed protein product [Bos taurus]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|345779584|ref|XP_858923.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Canis lupus familiaris]
Length = 442
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 312 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 357
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 358 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 407
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 408 IDRMSRIVFPVLFGTFNLVYWATYL 432
>gi|344279193|ref|XP_003411375.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Loxodonta africana]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|395843743|ref|XP_003794633.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Otolemur garnettii]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|426231655|ref|XP_004009854.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Ovis
aries]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|291385732|ref|XP_002709460.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 2
precursor-like [Oryctolagus cuniculus]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|334311425|ref|XP_001379989.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Monodelphis domestica]
Length = 449
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 40/157 (25%)
Query: 3 FFYCIATILEFAAVHYFT------------KTGSGEIPFLVSSDEIRVHPHPKSYVSEDE 50
F + + ++EFAAV+YFT +T +P + DEI +HP
Sbjct: 310 FAFVFSALIEFAAVNYFTNLQNQRTMQKVSRTALPSVPTVPVEDEIVLHP---------- 359
Query: 51 EDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEV-NLVANEKYRKKREQEVSRE 109
+ N+ K RV S+ + +L + EV N++A +
Sbjct: 360 -ESNFNLKK-----RVNSL-----------TLPKLQSQEVKNVLARAPNSQLMSAIPPPL 402
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YWI Y++
Sbjct: 403 PPPAAIGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 439
>gi|149035304|gb|EDL90008.1| similar to Gamma-aminobutyric-acid receptor alpha-2 subunit
precursor (GABA(A) receptor) [Rattus norvegicus]
Length = 367
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 237 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 282
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 283 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 332
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 333 IDRMSRIVFPVLFGTFNLVYWATYL 357
>gi|351696714|gb|EHA99632.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Heterocephalus
glaber]
Length = 468
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 333 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 376
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 377 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 428
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 429 SKIDRLSRIAFPLLFGIFNLVYWATYL 455
>gi|348571816|ref|XP_003471691.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
isoform 1 [Cavia porcellus]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|26338508|dbj|BAC32925.1| unnamed protein product [Mus musculus]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 154 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 199
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 200 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 249
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 250 IDRMSRIVFPVLFGTFNLVYWATYL 274
>gi|197100628|ref|NP_001126829.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Pongo
abelii]
gi|55732783|emb|CAH93089.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|301763288|ref|XP_002917061.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Ailuropoda melanoleuca]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|444518646|gb|ELV12282.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Tupaia chinensis]
Length = 405
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 270 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 313
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 314 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 365
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 366 SKIDRLSRIAFPLLFGIFNLVYWATYL 392
>gi|403284715|ref|XP_003933703.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|335293402|ref|XP_003356953.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Sus scrofa]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|332218614|ref|XP_003258449.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Nomascus leucogenys]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|410957690|ref|XP_003985458.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Felis catus]
Length = 438
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 308 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 353
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 354 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 403
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 404 IDRMSRIVFPVLFGTFNLVYWATYL 428
>gi|387762508|ref|NP_001248597.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|402869280|ref|XP_003898691.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Papio anubis]
gi|402869282|ref|XP_003898692.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Papio anubis]
gi|209572895|sp|Q5RCC5.2|GBRA2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|355687258|gb|EHH25842.1| GABA(A) receptor subunit alpha-2 [Macaca mulatta]
gi|355758702|gb|EHH61508.1| GABA(A) receptor subunit alpha-2 [Macaca fascicularis]
gi|380811390|gb|AFE77570.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811392|gb|AFE77571.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811394|gb|AFE77572.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|326672926|ref|XP_001920091.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 487
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V+ D++ E + + K
Sbjct: 357 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSIVN-DKKKETSVMKKN-- 399
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ Y + P+I + V+ A + K Q V++E + NSVSKID
Sbjct: 400 -----NAYAVAVANYAPHIAKDSALPTVSKSATPEPSK--AQPVAKETKK-TFNSVSKID 451
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRI+FP FG NL YW +Y+
Sbjct: 452 RMSRIIFPVLFGSFNLVYWATYL 474
>gi|207079903|ref|NP_001128912.1| DKFZP459G012 protein [Pongo abelii]
gi|55733677|emb|CAH93515.1| hypothetical protein [Pongo abelii]
Length = 349
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 28/158 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 214 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 257
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 258 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 309
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
SKIDR+SRI FP FG+ NL YW +Y+ + P
Sbjct: 310 SKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTP 347
>gi|281338656|gb|EFB14240.1| hypothetical protein PANDA_005233 [Ailuropoda melanoleuca]
Length = 428
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 298 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 343
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 344 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 393
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 394 IDRMSRIVFPVLFGTFNLVYWATYL 418
>gi|120758|sp|P23576.1|GBRA2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|344244455|gb|EGW00559.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Cricetulus
griseus]
Length = 377
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 247 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 292
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 293 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 342
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 343 IDRMSRIVFPVLFGTFNLVYWATYL 367
>gi|167000751|ref|NP_000798.2| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|167000817|ref|NP_001107647.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|332819972|ref|XP_003310463.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan troglodytes]
gi|397490161|ref|XP_003816076.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan paniscus]
gi|426344236|ref|XP_004038680.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Gorilla gorilla gorilla]
gi|126302547|sp|P47869.2|GBRA2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|119613428|gb|EAW93022.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613430|gb|EAW93024.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613431|gb|EAW93025.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|158260347|dbj|BAF82351.1| unnamed protein product [Homo sapiens]
gi|168277582|dbj|BAG10769.1| gamma-aminobutyric-acid receptor subunit alpha-2 precursor
[synthetic construct]
gi|193785006|dbj|BAG54159.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|444518931|gb|ELV12466.1| Gamma-aminobutyric acid receptor subunit alpha-2, partial [Tupaia
chinensis]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V+ D++ E+ ++
Sbjct: 67 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVN-DKKKEKASVMVQNN 111
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
Y V L P LST + E RK + + NSVSKID
Sbjct: 112 AYAVAVANYAPNLSKDP----VLSTISKSATTPEPNRKPENKPAEAKK---TFNSVSKID 164
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R+SRI+FP FG NL YW +Y+
Sbjct: 165 RMSRIVFPVLFGTFNLVYWATYL 187
>gi|6679901|ref|NP_032092.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Mus
musculus]
gi|120757|sp|P26048.1|GBRA2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|193389|gb|AAA37650.1| GABA-A receptor alpha-2 subunit [Mus musculus]
gi|26333011|dbj|BAC30223.1| unnamed protein product [Mus musculus]
gi|92110217|gb|AAI15728.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
gi|148705860|gb|EDL37807.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|426230042|ref|XP_004009092.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Ovis aries]
Length = 477
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 342 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 385
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 386 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|149052303|gb|EDM04120.1| gamma-aminobutyric acid A receptor, alpha 1, isoform CRA_a [Rattus
norvegicus]
Length = 349
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 28/158 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 214 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 257
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 258 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 309
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
SKIDR+SRI FP FG+ NL YW +Y+ + P
Sbjct: 310 SKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTP 347
>gi|354501856|ref|XP_003513004.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Cricetulus griseus]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|431893824|gb|ELK03641.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Pteropus alecto]
Length = 534
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 404 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 449
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 450 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 499
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 500 IDRMSRIVFPVLFGTFNLVYWATYL 524
>gi|148700394|gb|EDL32341.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
Length = 435
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 300 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 343
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 344 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 395
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 396 SKIDRLSRIAFPLLFGIFNLVYWATYL 422
>gi|204204|gb|AAC42030.1| GABA-A receptor alpha-2 subunit [Rattus norvegicus]
Length = 432
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 302 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKGSVMIQNNA 347
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 348 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 397
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 398 IDRMSRIVFPVLFGTFNLVYWATYL 422
>gi|296192685|ref|XP_002744180.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
6 [Callithrix jacchus]
Length = 462
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 327 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 371
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 372 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 422
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 423 SKIDRLSRIAFPLLFGIFNLVYWATYL 449
>gi|62088170|dbj|BAD92532.1| gamma-aminobutyric acid A receptor, alpha 2 precursor variant [Homo
sapiens]
Length = 461
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 331 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 376
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 377 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 426
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 427 IDRMSRIVFPVLFGTFNLVYWATYL 451
>gi|410949366|ref|XP_003981394.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Felis catus]
Length = 477
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 342 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 385
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 386 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|194748088|ref|XP_001956481.1| GF24573 [Drosophila ananassae]
gi|190623763|gb|EDV39287.1| GF24573 [Drosophila ananassae]
Length = 703
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 100 KKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
++ E E R G + NSVSKIDR+SRI+FP F L+N+ YW Y++ + P
Sbjct: 642 RREEIEARRTGKRVPQFNSVSKIDRISRIVFPLLFLLINVVYWYCYLSRSSRILANTP 699
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDE 50
+SF + ATIL+FA VHYFTK GSGE FL + + P P+ SE E
Sbjct: 454 LSFAFIFATILQFAVVHYFTKYGSGEAYFLDN-----LEPEPQEKDSETE 498
>gi|354495034|ref|XP_003509637.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Cricetulus griseus]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 320 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 365 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 415
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 416 SKIDRLSRIAFPLLFGIFNLVYWATYL 442
>gi|338713086|ref|XP_001500601.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Equus caballus]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 320 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 364 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 415
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 416 SKIDRLSRIAFPLLFGIFNLVYWATYL 442
>gi|296192683|ref|XP_002744179.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Callithrix jacchus]
Length = 477
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 342 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 385
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 386 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|281345133|gb|EFB20717.1| hypothetical protein PANDA_000328 [Ailuropoda melanoleuca]
Length = 432
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 297 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 341
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 342 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 392
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 393 SKIDRLSRIAFPLLFGIFNLVYWATYL 419
>gi|74200745|dbj|BAE24754.1| unnamed protein product [Mus musculus]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 320 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 364 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 415
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 416 SKIDRLSRIAFPLLFGIFNLVYWATYL 442
>gi|300798243|ref|NP_001178048.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Bos
taurus]
gi|426230036|ref|XP_004009089.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Ovis aries]
gi|426230038|ref|XP_004009090.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Ovis aries]
gi|426230040|ref|XP_004009091.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Ovis aries]
gi|120752|sp|P08219.1|GBRA1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|757755|emb|CAA29189.1| GABA alpha subunit [Bos taurus]
gi|88954406|gb|AAI14157.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Bos taurus]
gi|296485088|tpg|DAA27203.1| TPA: gamma-aminobutyric acid receptor subunit alpha-1 precursor
[Bos taurus]
gi|440913396|gb|ELR62849.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Bos grunniens
mutus]
gi|225660|prf||1309301A GABA/benzodiazepine receptor alpha
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|332822556|ref|XP_001144644.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Pan troglodytes]
gi|397473106|ref|XP_003808061.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Pan paniscus]
Length = 477
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 342 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 386
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 387 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|38327554|ref|NP_000797.2| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083724|ref|NP_001121115.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083726|ref|NP_001121116.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083728|ref|NP_001121117.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|189083734|ref|NP_001121120.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Homo
sapiens]
gi|55625298|ref|XP_518079.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
10 [Pan troglodytes]
gi|114603253|ref|XP_001144938.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Pan troglodytes]
gi|114603259|ref|XP_001145253.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
9 [Pan troglodytes]
gi|397473100|ref|XP_003808058.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Pan paniscus]
gi|397473102|ref|XP_003808059.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Pan paniscus]
gi|397473104|ref|XP_003808060.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Pan paniscus]
gi|27808653|sp|P14867.3|GBRA1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|21265168|gb|AAH30696.1| GABRA1 protein [Homo sapiens]
gi|119581942|gb|EAW61538.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1, isoform CRA_b
[Homo sapiens]
gi|119581943|gb|EAW61539.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1, isoform CRA_b
[Homo sapiens]
gi|123980024|gb|ABM81841.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 [synthetic
construct]
gi|307684854|dbj|BAJ20467.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 [synthetic
construct]
gi|226988|prf||1612349A GABA A receptor alpha
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 366 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|403287096|ref|XP_003934793.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Saimiri boliviensis boliviensis]
Length = 477
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 342 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 385
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 386 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|291223032|ref|XP_002731516.1| PREDICTED: glycine receptor, alpha 1-like [Saccoglossus
kowalevskii]
Length = 837
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 30/149 (20%)
Query: 4 FYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVD 63
F+ A +LEFA YF KTG E + + + R+H + +SE H
Sbjct: 705 FFVFAALLEFAIASYFHKTG--ERRLVENRIKERLHILQSANISERNRSPSMGRH----- 757
Query: 64 YRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEK-------YRKKREQEVSREGYQFHIN 116
+V +++ + + + Y + E V + +
Sbjct: 758 ----------------TMVTEMTNNGIGFYGSNHMAYETRLYMPQTETNVKSSHRKNLMK 801
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ IDR+SR+LFPASF L N+ YW +Y+
Sbjct: 802 AAMTIDRLSRVLFPASFALFNIVYWPTYL 830
>gi|188484479|gb|ACD50863.1| gamma-aminobutyric acid A receptor alpha 2 [Felis catus]
Length = 411
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 283 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 328
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 329 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 378
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 379 IDRMSRIVFPVLFGTFNLVYWATYL 403
>gi|348575243|ref|XP_003473399.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Cavia porcellus]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|386781308|ref|NP_001247861.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
gi|75075902|sp|Q4R534.1|GBRA1_MACFA RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|67970898|dbj|BAE01791.1| unnamed protein product [Macaca fascicularis]
gi|355691821|gb|EHH27006.1| hypothetical protein EGK_17100 [Macaca mulatta]
gi|355750395|gb|EHH54733.1| hypothetical protein EGM_15625 [Macaca fascicularis]
gi|380784915|gb|AFE64333.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
gi|380784917|gb|AFE64334.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Macaca
mulatta]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|402873306|ref|XP_003900520.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Papio anubis]
gi|402873308|ref|XP_003900521.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Papio anubis]
gi|402873310|ref|XP_003900522.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Papio anubis]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|344265228|ref|XP_003404687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Loxodonta africana]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|332238945|ref|XP_003268663.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Nomascus leucogenys]
gi|332238947|ref|XP_003268664.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Nomascus leucogenys]
gi|332238949|ref|XP_003268665.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Nomascus leucogenys]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|197097678|ref|NP_001125803.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Pongo
abelii]
gi|55729253|emb|CAH91362.1| hypothetical protein [Pongo abelii]
gi|62898455|dbj|BAD97167.1| gamma-aminobutyric acid (GABA) A receptor, alpha 1 precursor
variant [Homo sapiens]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 366 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|402873314|ref|XP_003900524.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
5 [Papio anubis]
Length = 477
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 342 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 386
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 387 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 437
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 438 SKIDRLSRIAFPLLFGIFNLVYWATYL 464
>gi|402873312|ref|XP_003900523.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Papio anubis]
Length = 462
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 327 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 371
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 372 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 422
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 423 SKIDRLSRIAFPLLFGIFNLVYWATYL 449
>gi|344243738|gb|EGV99841.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Cricetulus
griseus]
Length = 426
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 291 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 335
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 336 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 386
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 387 SKIDRLSRIAFPLLFGIFNLVYWATYL 413
>gi|31633|emb|CAA32874.1| GABA-A receptor alpha 1 subunit [Homo sapiens]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 366 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|395817124|ref|XP_003782025.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Otolemur garnettii]
gi|395817128|ref|XP_003782027.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Otolemur garnettii]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 366 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|301753449|ref|XP_002912566.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Ailuropoda melanoleuca]
gi|410949362|ref|XP_003981392.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Felis catus]
gi|410949364|ref|XP_003981393.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Felis catus]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|6753936|ref|NP_034380.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Mus
musculus]
gi|34328532|ref|NP_899155.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Rattus
norvegicus]
gi|51317298|sp|P62813.1|GBRA1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|51317299|sp|P62812.1|GBRA1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-1;
AltName: Full=GABA(A) receptor subunit alpha-1; Flags:
Precursor
gi|51036|emb|CAA43672.1| GABA A receptor alpha 1 subunit [Mus musculus]
gi|193387|gb|AAB59634.1| GABA-A receptor alpha-1 subunit [Mus musculus]
gi|193408|gb|AAA37654.1| GABA-alpha receptor alpha-1 subunit [Mus musculus]
gi|204202|gb|AAC42029.1| GABA-A receptor alpha-1 subunit [Rattus norvegicus]
gi|232586|gb|AAB19294.1| GABAA receptor alpha 1 subunit [mice, Peptide, 455 aa]
gi|26329693|dbj|BAC28585.1| unnamed protein product [Mus musculus]
gi|26333301|dbj|BAC30368.1| unnamed protein product [Mus musculus]
gi|46371155|gb|AAS90346.1| GABA-A receptor alpha1 subunit [Rattus norvegicus]
gi|71679715|gb|AAI00062.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Rattus
norvegicus]
gi|124375662|gb|AAI32332.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
gi|149052304|gb|EDM04121.1| gamma-aminobutyric acid A receptor, alpha 1, isoform CRA_b [Rattus
norvegicus]
gi|187953677|gb|AAI37734.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 [Mus
musculus]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 320 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 364 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 415
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 416 SKIDRLSRIAFPLLFGIFNLVYWATYL 442
>gi|403287090|ref|XP_003934790.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287092|ref|XP_003934791.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Saimiri boliviensis boliviensis]
gi|403287094|ref|XP_003934792.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Saimiri boliviensis boliviensis]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|291387765|ref|XP_002710402.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, subunit alpha
1-like [Oryctolagus cuniculus]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|296192677|ref|XP_002744176.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
2 [Callithrix jacchus]
gi|296192679|ref|XP_002744177.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Callithrix jacchus]
gi|296192681|ref|XP_002744178.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
4 [Callithrix jacchus]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 321 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 366 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|431918112|gb|ELK17340.1| Gamma-aminobutyric acid receptor subunit alpha-1 [Pteropus alecto]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|73954088|ref|XP_546261.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 [Canis
lupus familiaris]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|350594445|ref|XP_003134137.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Sus scrofa]
Length = 456
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 321 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 364
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 365 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 416
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 417 SKIDRLSRIAFPLLFGIFNLVYWATYL 443
>gi|326913720|ref|XP_003203182.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Meleagris gallopavo]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEED-EQTNIHKIK 61
+ + + ++EFA V+YFTK +S+ + ++ E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKALEAAKIKKKE 366
Query: 62 ---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
+ + + Y + PN+ + ++ A + E+ S++ Y NS
Sbjct: 367 RQLLGNKSTNTYSTGKMTPAPNMPKDSAPSVISNAAPAPVKSVEEKPAESKKTY----NS 422
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
+SKID++SRI+FP FG NL YW +Y+
Sbjct: 423 ISKIDKMSRIIFPVLFGTFNLVYWATYL 450
>gi|55727657|emb|CAH90582.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V + +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTVSKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|118084219|ref|XP_416880.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Gallus
gallus]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEED-EQTNIHKIK 61
+ + + ++EFA V+YFTK +S+ + ++ E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKALEAAKIKKKE 366
Query: 62 ---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
+ + + Y + PN+ + ++ A + E+ S++ Y NS
Sbjct: 367 RQLLGNKSTNTYSTGKMTPAPNMPKDSAPSVISNAAPAPVKPVEEKPAESKKTY----NS 422
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
+SKID++SRI+FP FG NL YW +Y+
Sbjct: 423 ISKIDKMSRIIFPVLFGTFNLVYWATYL 450
>gi|224043000|ref|XP_002197368.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Taeniopygia guttata]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK +S+ + ++ ++ K K
Sbjct: 328 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKAQEAAKIKKKE 366
Query: 62 ---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
+ + + Y + PN+ + ++ + + E+ S++ Y NS
Sbjct: 367 RNLLGNKPTNTYSTGKMTPAPNMPKDSAPAVISNTTSAPVKPAEEKPPESKKTY----NS 422
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
+SKID++SRI+FP FG NL YW +Y+
Sbjct: 423 ISKIDKMSRIIFPVLFGTFNLVYWATYL 450
>gi|1149457|emb|CAA64068.1| neurotransmitter receptor subunit [Carassius auratus]
gi|1589638|prf||2211380B GABA type A receptor:SUBUNIT=alpha6
Length = 438
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + + ++EFAAV+YF+ L ++ E+R + V D E + V
Sbjct: 310 FAFVFSALIEFAAVNYFST--------LQANKELRRASMACAAVRSDGELVTNPLDPGGV 361
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF-HINSV--S 119
LK N V Q A E++ + + ++ ++G IN++ S
Sbjct: 362 ------------LKKRLNSVSQRD-------APERFSRAPQPDLHQQGSTVPAINTLTTS 402
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
ID+ SRILFP SFG NL YWI Y+T
Sbjct: 403 IIDKYSRILFPLSFGAFNLVYWIVYLT 429
>gi|327273674|ref|XP_003221605.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Anolis carolinensis]
Length = 442
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + K
Sbjct: 301 YAFVFSALIEFATVNYFTKRGWAW--------------DGKSVVNDKKKEKASVMKKNNA 346
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K P I +T E + K + + + F NSVSK
Sbjct: 347 YAVAVANYAPNITKDSALPTISKSATTTSTGTTTAEPNKAKPDAKPAEAKKTF--NSVSK 404
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 405 IDRMSRIVFPVLFGTFNLVYWATYL 429
>gi|386422|gb|AAB27278.1| gamma-aminobutyric acidA receptor alpha 2 subunit [Homo sapiens]
Length = 451
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V++ ++++ + + +
Sbjct: 321 YAFVFSALIEFATVNYFTKRGWTW--------------DGKSVVNDKKKEKASVMIQNNA 366
Query: 63 DYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ Y K V I +T E N KK E + + F NSVSK
Sbjct: 367 YAVAVANYAPNLSKDPVLSTISKSATTPEPN--------KKPENKPAEAKKTF--NSVSK 416
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
IDR+SRI+FP FG NL YW +Y+
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>gi|296486592|tpg|DAA28705.1| TPA: gamma-aminobutyric acid (GABA) A receptor, subunit alpha
2-like [Bos taurus]
Length = 91
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 38 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 81
>gi|21693516|gb|AAM75333.1|AF512350_1 GABRA1, partial [Macaca mulatta]
Length = 97
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
NSVSKIDR+SRI FP FG+ NL YW +Y+ + P
Sbjct: 55 NSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTP 95
>gi|301604063|ref|XP_002931687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Xenopus (Silurana) tropicalis]
Length = 442
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 23/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + D + K E E + I+
Sbjct: 299 YAFVFSALIEFATVNYFTKRS-------WAWDGKKALEAAKIKKKEQESLGRKPINS--- 348
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSKI 121
Y R + PN+ L++ + A+ + E+ S++ Y NSVSKI
Sbjct: 349 -------YSGR-IPYTPNMSKDLTSSVIANAASIHMKTTEEKCAESKKTY----NSVSKI 396
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 397 DKMSRIVFPVMFGTFNLVYWATYL 420
>gi|301624791|ref|XP_002941682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like,
partial [Xenopus (Silurana) tropicalis]
Length = 412
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
NSVSKIDR+SRI FP FG NL YW +Y+ + +PP
Sbjct: 370 NSVSKIDRLSRIAFPLLFGTFNLVYWATYLNREPAIKPSNPP 411
>gi|326673418|ref|XP_003199880.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like,
partial [Danio rerio]
Length = 101
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 59 NSVSKIDRMSRIMFPVLFGSFNLVYWATYL 88
>gi|226315|prf||1506343A GABA A receptor alpha
Length = 455
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D V P E+ ++ IK
Sbjct: 320 YAFVFSALIEFATVNYFTKRG-------YAWDGKSVVP---------EKPKKVKDPLIKK 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ + Y PN L+ + L K +EV E + NSV
Sbjct: 364 N----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 415
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+SRI FP FG+ N+ YW +Y+
Sbjct: 416 SKIDRLSRIAFPLLFGIFNIVYWATYL 442
>gi|432109367|gb|ELK33625.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Myotis davidii]
Length = 546
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 94 ANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
A + KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+ +
Sbjct: 487 ATPEPNKKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYLNRE 539
>gi|291403973|ref|XP_002718328.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 5-like
[Oryctolagus cuniculus]
Length = 463
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + + + PNI + T A+ K E++ S + NS+SKID
Sbjct: 373 --KSTNAFTTGKMTHPPNIPKE-QTPAGTSNASSASAKPSEEKTSESKKTY--NSISKID 427
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP FG NL YW +Y+
Sbjct: 428 KMSRIVFPVLFGTFNLVYWATYL 450
>gi|322797168|gb|EFZ19396.1| hypothetical protein SINV_15392 [Solenopsis invicta]
Length = 82
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVSKIDRVSR++FP F +NLFYW +Y++ E
Sbjct: 44 NSVSKIDRVSRVMFPLFFLTINLFYWYAYLSRSE 77
>gi|37623902|gb|AAQ95596.1| GABA-A alpha 1 subunit [Macaca fascicularis]
Length = 98
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 68 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 97
>gi|395817122|ref|XP_003782024.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
1 [Otolemur garnettii]
Length = 546
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 28/150 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 411 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 455
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 456 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 506
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQ 148
SKIDR+SRI FP FG+ NL YW +Y+ +
Sbjct: 507 SKIDRLSRIAFPLLFGIFNLVYWATYLNRE 536
>gi|444515640|gb|ELV10944.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Tupaia chinensis]
Length = 408
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 262 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 316
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K +E + Y NSVSK+
Sbjct: 317 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQESPAETKTY----NSVSKV 371
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 372 DKISRIIFPVLFAIFNLVYWATYV 395
>gi|126337128|ref|XP_001362894.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Monodelphis domestica]
Length = 463
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 30/160 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK +S+ + ++ ++ +K K
Sbjct: 328 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKAQEAAKNKKKE 366
Query: 62 ---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
+ + Y + PNI + ++ + E+ S++ Y NS
Sbjct: 367 REIFINKSTNAYNTGKMTHPPNIPKDPAPSGISNATPVPVKPVEEKPPESKKTY----NS 422
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
+SKID++SRI+FP FG NL YW +Y+ + PP
Sbjct: 423 ISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGATPP 462
>gi|348513621|ref|XP_003444340.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Oreochromis niloticus]
Length = 461
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK +S+ + ++ + + K K
Sbjct: 326 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKAMEAQMPK-KK 363
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTD-EVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
D S N L+ D ++ ++N + + E + NSVSKI
Sbjct: 364 DPLALSKKPNNNCSAGVNYTTNLTKDASISTISNSTAVQLKLPETKAPDPKKTYNSVSKI 423
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D+++RI+FP FG NL YW +Y+
Sbjct: 424 DKMARIVFPVLFGTFNLVYWATYL 447
>gi|5813763|gb|AAD52001.1| GABAA receptor alpha 6 subunit [Mus musculus]
Length = 442
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS SE E E +H K
Sbjct: 300 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAATPPVAKSKASESLEAEIV-VHSDSK 356
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P+ + ++ + VS S
Sbjct: 357 YHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGGTS 404
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 405 KIDQYSRILFPVAFAGFNLVYWIVYLS 431
>gi|51038|emb|CAA36244.1| precursor polypeptide (AA -17 to 426) [Mus musculus]
gi|5813765|gb|AAD52003.1| GABAA receptor alpha 6 subunit [Mus musculus]
gi|148700396|gb|EDL32343.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_b [Mus musculus]
Length = 443
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS SE E E +H K
Sbjct: 301 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAATPPVAKSKASESLEAEIV-VHSDSK 357
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P+ + ++ + VS S
Sbjct: 358 YHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGGTS 405
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 406 KIDQYSRILFPVAFAGFNLVYWIVYLS 432
>gi|426350896|ref|XP_004042999.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1
[Gorilla gorilla gorilla]
Length = 491
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 28/150 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 356 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 400
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 401 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 451
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQ 148
SKIDR+SRI FP FG+ NL YW +Y+ +
Sbjct: 452 SKIDRLSRIAFPLLFGIFNLVYWATYLNRE 481
>gi|11055259|gb|AAG28024.1|AF256197_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|11055261|gb|AAG28025.1|AF256198_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|5813766|gb|AAD52004.1| GABAA receptor alpha 6 subunit [Mus musculus]
gi|148700395|gb|EDL32342.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Mus musculus]
Length = 453
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS SE E E +H K
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAATPPVAKSKASESLEAEIV-VHSDSK 367
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P+ + ++ + VS S
Sbjct: 368 YHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGGTS 415
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 416 KIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|5813764|gb|AAD52002.1| GABAA receptor alpha 6 subunit [Mus musculus]
Length = 452
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS SE E E +H K
Sbjct: 310 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAATPPVAKSKASESLEAEIV-VHSDSK 366
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P+ + ++ + VS S
Sbjct: 367 YHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGGTS 414
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 415 KIDQYSRILFPVAFAGFNLVYWIVYLS 441
>gi|383847068|ref|XP_003699177.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 593
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
KKR + R NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 538 KKRRKRTPR------YNSVSKIDRASRIMFPVFFLAINVFYWYAYLSRSE 581
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF 29
+SF + ATI++FA VHYFTK GSGE F
Sbjct: 411 LSFAFIFATIIQFAVVHYFTKYGSGECYF 439
>gi|344265226|ref|XP_003404686.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Loxodonta africana]
Length = 453
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + E + ++ P +S+ +E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQE-----AKRNAQIAAPPPVTISKAKEPLEAKIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P S++ ++ + F
Sbjct: 366 SKYHLKKRITSL----TLPIVP------SSESSKVLTRVPILQPTPLTPPPLSPDF--GG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|395817126|ref|XP_003782026.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1 isoform
3 [Otolemur garnettii]
Length = 487
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 28/150 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G KS V E + + + K
Sbjct: 352 YAFVFSALIEFATVNYFTKRGYAW--------------DGKSVVPEKPKKVKDPLIKKN- 396
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGY----QFHINSV 118
+ Y PN L+ + L K +EV E + NSV
Sbjct: 397 -----NTYAPTATSYTPN----LARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSV 447
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQ 148
SKIDR+SRI FP FG+ NL YW +Y+ +
Sbjct: 448 SKIDRLSRIAFPLLFGIFNLVYWATYLNRE 477
>gi|350400005|ref|XP_003485706.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 515
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 470 NSVSKIDRASRIVFPVFFLAINVFYWCAYLSRSE 503
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF 29
+SF + ATI++FA VHYFTK GSGE F
Sbjct: 333 LSFAFIFATIIQFAVVHYFTKYGSGECYF 361
>gi|340715405|ref|XP_003396204.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 515
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVSKIDR SRI+FP F +N+FYW +Y++ E
Sbjct: 470 NSVSKIDRASRIVFPVFFLAINVFYWCAYLSRSE 503
>gi|194379246|dbj|BAG58174.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 330 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 359
>gi|281348283|gb|EFB23867.1| hypothetical protein PANDA_017042 [Ailuropoda melanoleuca]
Length = 381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K S + T + +
Sbjct: 236 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPSAPTKKTSTTFNIVG 290
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 291 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKTTYVQDTPTETKTY----NSVSKV 345
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 346 DKISRIIFPVLFAIFNLVYWATYV 369
>gi|345324532|ref|XP_001505814.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Ornithorhynchus anatinus]
Length = 528
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEED-EQTNIHKIK 61
+ + + ++EFA V+YFTK +S+ + ++ E I K +
Sbjct: 392 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKALEAAKIKKKE 430
Query: 62 VDY---RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSV 118
D + + + L PNI ++ A K E+ + NS+
Sbjct: 431 RDLLGNKSVNAFSAGKLTHPPNIPKDVTPSGPGNPAAAAPAKPSEERPPETKKTY--NSI 488
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
SKID++SRI+FP FG NL YW +Y+
Sbjct: 489 SKIDKMSRIVFPVLFGTFNLVYWATYL 515
>gi|441663576|ref|XP_004091688.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Nomascus leucogenys]
Length = 511
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 458 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 501
>gi|403284717|ref|XP_003933704.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 511
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 458 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 501
>gi|402869284|ref|XP_003898693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Papio anubis]
Length = 511
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 458 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 501
>gi|332819976|ref|XP_517321.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Pan troglodytes]
gi|397490163|ref|XP_003816077.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Pan paniscus]
gi|221039502|dbj|BAH11514.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 403 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 446
>gi|296196628|ref|XP_002745923.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Callithrix jacchus]
Length = 456
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 403 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 446
>gi|403284719|ref|XP_003933705.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Saimiri boliviensis boliviensis]
Length = 456
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 403 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 446
>gi|402869286|ref|XP_003898694.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Papio anubis]
Length = 456
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 403 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 446
>gi|332218618|ref|XP_003258451.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Nomascus leucogenys]
Length = 456
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
KK E + + F NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 403 KKPENKPAEAKKTF--NSVSKIDRMSRIVFPVLFGTFNLVYWATYL 446
>gi|348518922|ref|XP_003446980.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Oreochromis niloticus]
Length = 461
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
NSVSKIDR++RI FP FG NL YW +Y+ + +P
Sbjct: 420 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGANP 460
>gi|432949769|ref|XP_004084249.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Oryzias latipes]
Length = 461
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
NSVSKIDR++RI FP FG NL YW +Y+ + +P
Sbjct: 420 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMNP 460
>gi|301783743|ref|XP_002927287.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K S + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPSAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKTTYVQDTPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|395527078|ref|XP_003765678.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Sarcophilus harrisii]
Length = 479
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK +S+ + ++ ++ +K K
Sbjct: 344 YAFVFSALIEFATVNYFTK---------------------RSWAWDGKKAQEAAKNKKKE 382
Query: 62 ---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINS 117
+ + Y + PNI + V+ + E+ S++ Y NS
Sbjct: 383 REIFINKSTNAYNTGKMTHPPNIPKDPAPSGVSNATPVPVKPAEEKPPESKKTY----NS 438
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
+SKID++SRI+FP FG NL YW +Y+
Sbjct: 439 ISKIDKMSRIVFPVLFGTFNLVYWATYL 466
>gi|47219235|emb|CAG11697.1| unnamed protein product [Tetraodon nigroviridis]
Length = 470
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
NSVSKIDR++RI FP FG NL YW +Y+ + +P
Sbjct: 429 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMNP 469
>gi|332245511|ref|XP_003271903.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Nomascus leucogenys]
gi|332245513|ref|XP_003271904.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Nomascus leucogenys]
Length = 492
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ +VA+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIVASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|153791906|ref|NP_032094.2| gamma-aminobutyric acid receptor subunit alpha-6 isoform 2
precursor [Mus musculus]
Length = 443
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT S + + + + P S+ E Q I
Sbjct: 301 FAFVFSALIEFAAVNYFTNLQSQK-----AERQAQTAATPPVAKSKASESLQAEIVVHSD 355
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P+ + ++ + VS
Sbjct: 356 SKYHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGG 403
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 404 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 432
>gi|410915044|ref|XP_003970997.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Takifugu rubripes]
Length = 459
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
NSVSKIDR++RI FP FG NL YW +Y+ + +P
Sbjct: 418 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMNP 458
>gi|153792343|ref|NP_001093111.1| gamma-aminobutyric acid receptor subunit alpha-6 isoform 1
precursor [Mus musculus]
gi|341941084|sp|P16305.3|GBRA6_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|74149350|dbj|BAE22438.1| unnamed protein product [Mus musculus]
gi|148877527|gb|AAI45703.1| Gabra6 protein [Mus musculus]
gi|219519815|gb|AAI45159.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 [Mus
musculus]
Length = 453
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT S + + + + P S+ E Q I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQK-----AERQAQTAATPPVAKSKASESLQAEIVVHSD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P+ + ++ + VS
Sbjct: 366 SKYHLKKRISSL----TLPIVPSSEASKALSRTPIL--------KSTPVSPPLLLPATGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|395855524|ref|XP_003800206.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Otolemur garnettii]
gi|395855526|ref|XP_003800207.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Otolemur garnettii]
Length = 462
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 367
Query: 62 -VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVS 119
+ + + + + PNI + + + ++ + E+ S++ Y NS+S
Sbjct: 368 LILNKSTNAFTTGKMTHAPNIPKEQTPAGTSNASSVSVKPPEEKPSESKKTY----NSIS 423
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 424 KIDKMSRIVFPVLFGTFNLVYWATYL 449
>gi|166851810|ref|NP_001107772.1| GABA-gated ion channel [Tribolium castaneum]
gi|156447609|gb|ABU63597.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006455|gb|EFA02903.1| glycine receptor [Tribolium castaneum]
Length = 505
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFV 152
NSVSKIDR SR++FP F +NLFYW SY++ + V
Sbjct: 464 NSVSKIDRASRVVFPVLFVTINLFYWYSYLSRTKRIV 500
>gi|403306403|ref|XP_003943726.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Saimiri boliviensis boliviensis]
Length = 462
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 367
Query: 62 -VDYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + + + L PNI +Q N + + + S++ Y NS+S
Sbjct: 368 VILNKSTNAFTTGKLSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTY----NSIS 423
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 424 KIDKMSRIVFPVLFGTFNLVYWATYL 449
>gi|402911763|ref|XP_003918476.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Papio
anubis]
Length = 391
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 245 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 299
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 300 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 354
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 355 DKISRIIFPVLFAIFNLVYWATYV 378
>gi|20306952|gb|AAH28629.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Homo sapiens]
gi|123983186|gb|ABM83334.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [synthetic
construct]
gi|123997891|gb|ABM86547.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [synthetic
construct]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|119578060|gb|EAW57656.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5, isoform CRA_a
[Homo sapiens]
gi|119578061|gb|EAW57657.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5, isoform CRA_a
[Homo sapiens]
gi|194383486|dbj|BAG64714.1| unnamed protein product [Homo sapiens]
Length = 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 214 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 253
Query: 62 -VDYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + + + + PNI +Q N + + + S++ Y NS+S
Sbjct: 254 VILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTY----NSIS 309
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 310 KIDKMSRIVFPVLFGTFNLVYWATYL 335
>gi|403305832|ref|XP_003943456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Saimiri boliviensis boliviensis]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|291387763|ref|XP_002710401.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 453
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNVQTQK-----AKRKAQISASPPVTISKAAEPVEAEIVVHSD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P S + ++A V+
Sbjct: 366 SKYHLKKRITSL----TLPIVP------SAEPSKVLARTPILP--STPVTPPPLSPTFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|296236667|ref|XP_002763418.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
3 [Callithrix jacchus]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 347 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 401
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 402 TTYPINLAKDTEFSTISKGTAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 456
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 457 DKISRIIFPVLFAIFNLVYWATYV 480
>gi|120761|sp|P20236.1|GBRA3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|56178|emb|CAA36247.1| GABA-A receptor [Rattus norvegicus]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + ++ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLALDTEFSTISKAAAAPSASSTPTVIASPKTTYVQDSPAETKTY----NSVSKV 456
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 457 DKISRIIFPVLFAIFNLVYWATYV 480
>gi|426397777|ref|XP_004065082.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like,
partial [Gorilla gorilla gorilla]
Length = 308
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 162 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 216
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 217 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 271
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 272 DKISRIIFPVLFAIFNLVYWATYV 295
>gi|391347034|ref|XP_003747770.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 575
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 92 LVANEKYRK--KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
L+ N++YR +R R +NSVS IDR SRILFP SF +LNL YW + QE
Sbjct: 479 LMGNKRYRDEMRRSAPPGRT-----VNSVSIIDRCSRILFPLSFIVLNLIYWGHDMGIQE 533
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGE 26
M F + + T+LE+A VHYFTK GSGE
Sbjct: 362 MCFAFVMLTLLEYAGVHYFTKVGSGE 387
>gi|4557603|ref|NP_000799.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Homo
sapiens]
gi|397465573|ref|XP_003804565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Pan paniscus]
gi|397465575|ref|XP_003804566.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Pan paniscus]
gi|462149|sp|P34903.1|GBRA3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|386424|gb|AAB27279.1| gamma-aminobutyric acidA receptor alpha 3 subunit [Homo sapiens]
gi|10086250|gb|AAG12455.1| GABA receptor subunit alpha 3 [Homo sapiens]
gi|119619829|gb|EAW99423.1| gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Homo sapiens]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|189065479|dbj|BAG35318.1| unnamed protein product [Homo sapiens]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|297305005|ref|XP_001099995.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Macaca mulatta]
gi|297711327|ref|XP_002832295.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Pongo abelii]
gi|297711329|ref|XP_002832296.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Pongo abelii]
gi|355705251|gb|EHH31176.1| hypothetical protein EGK_21055 [Macaca mulatta]
gi|355757790|gb|EHH61315.1| hypothetical protein EGM_19301 [Macaca fascicularis]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|380811396|gb|AFE77573.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Macaca
mulatta]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|395857172|ref|XP_003800980.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Otolemur garnettii]
Length = 492
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGATPSASSTP-TIIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|170040777|ref|XP_001848164.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864375|gb|EDS27758.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 618
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
NSVSKIDRVSRI FP F +N+FYW Y++
Sbjct: 578 NSVSKIDRVSRIFFPLLFLAINVFYWCLYLS 608
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEI 36
+SF + ATI++FA VHYFTK GSGE F ++DE+
Sbjct: 407 LSFGFIFATIIQFAVVHYFTKYGSGECYF--NADEL 440
>gi|332843357|ref|XP_003314625.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Pan troglodytes]
Length = 336
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 202 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 241
Query: 62 -VDYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + + + + PNI +Q N + + + S++ Y NS+S
Sbjct: 242 VILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTY----NSIS 297
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 298 KIDKMSRIVFPVLFGTFNLVYWATYL 323
>gi|194376876|dbj|BAG57584.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 237 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 276
Query: 62 -VDYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + + + + PNI +Q N + + + S++ Y NS+S
Sbjct: 277 VILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTY----NSIS 332
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 333 KIDKMSRIVFPVLFGTFNLVYWATYL 358
>gi|221136860|ref|NP_001137557.1| gamma-aminobutyric acid receptor subunit alpha-6 [Bos taurus]
gi|296485091|tpg|DAA27206.1| TPA: gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Bos
taurus]
gi|440913395|gb|ELR62848.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Bos grunniens
mutus]
Length = 453
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +++ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAASPPVTIAKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+
Sbjct: 366 SKYHLKKRITSL----TLPIVP-------SPEASKVLT-RAPILQSTPVTPPPVSLTFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|312191372|gb|ADQ43740.1| gamma-aminobutyric acid A receptor subunit alpha-1 [Xenopus laevis]
Length = 338
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG NL YW +Y+
Sbjct: 307 NSVSKIDRLSRIAFPLLFGTFNLVYWATYL 336
>gi|226136|prf||1411303B GABA receptor alpha3
Length = 495
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSK+D++SRI+FP F + NL YW +Y+ +
Sbjct: 453 NSVSKVDKISRIIFPVLFAIFNLVYWATYVNRE 485
>gi|426257418|ref|XP_004022324.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Ovis
aries]
Length = 505
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSK+D++SRI+FP F + NL YW +Y+ +
Sbjct: 463 NSVSKVDKISRIIFPVLFAIFNLVYWATYVNRE 495
>gi|402692006|ref|NP_058765.3| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Rattus
norvegicus]
Length = 493
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + ++ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKAAAAPSASSTPTVIASPKTTYVQDSPAETKTY----NSVSKV 456
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 457 DKISRIIFPVLFAIFNLVYWATYV 480
>gi|204206|gb|AAC42031.1| GABA-A receptor alpha-3 subunit [Rattus norvegicus]
Length = 493
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + ++ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKAAAAPSASSTPTVIASPKTTYVQDSPAETKTY----NSVSKV 456
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQ 148
D++SRI+FP F + NL YW +Y+ +
Sbjct: 457 DKISRIIFPVLFAIFNLVYWATYVNRE 483
>gi|410920936|ref|XP_003973939.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Takifugu rubripes]
Length = 461
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKID++SRI+FP FG NL YW +Y+
Sbjct: 418 NSVSKIDKMSRIVFPVLFGTFNLVYWATYL 447
>gi|148689914|gb|EDL21861.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5 [Mus
musculus]
Length = 413
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 278 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 322
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ + + L PNI +Q N + + S++ Y NS+SKI
Sbjct: 323 --KSTNAFTTGKLTHPPNIPKEQPPAGTANAPTVSIKASEEKTAESKKTY----NSISKI 376
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 377 DKMSRIVFPILFGTFNLVYWATYL 400
>gi|307183282|gb|EFN70151.1| Gamma-aminobutyric acid receptor alpha-like [Camponotus floridanus]
Length = 488
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVSKIDR SR++FP F +N+FYW +Y++ E
Sbjct: 445 NSVSKIDRASRVVFPLFFLAINVFYWYAYLSRSE 478
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSD 34
+SF + ATI++FA VHYFTK GSGE F SSD
Sbjct: 297 LSFAFIFATIIQFAVVHYFTKYGSGECYF--SSD 328
>gi|301753447|ref|XP_002912565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Ailuropoda melanoleuca]
gi|281345131|gb|EFB20715.1| hypothetical protein PANDA_000326 [Ailuropoda melanoleuca]
Length = 453
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRRAQIAASPPVTISKASEPLEAGIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+
Sbjct: 366 SKYHLKKRITSL----TLPIVP-------SPEASKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|351713212|gb|EHB16131.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Heterocephalus
glaber]
Length = 492
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D+VSRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKVSRIIFPVLFAIFNLVYWATYV 479
>gi|326924424|ref|XP_003208427.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like,
partial [Meleagris gallopavo]
Length = 277
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + + ++ + E++V P + + N + I
Sbjct: 134 YAFVFSALIEFATVNYFTKRSWAWDGKKVLEAQEMKVKPVALA-------KKTNNTYNI- 185
Query: 62 VDYRVCSVYEIRTLK--VCPNIVDQLSTDEVNLVANEKYRKKREQEV---SREGYQFHIN 116
V + Y + K P I S N + R +E S++ Y N
Sbjct: 186 ----VGTTYPLNIAKDPGLPTISK--SAAATATATNVPPKMPRLEEKFPDSKKTY----N 235
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYI 145
SVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 236 SVSKVDKMSRIVFPVLFAIFNLVYWATYV 264
>gi|190402684|gb|ACE77815.1| gamma-aminobutyric acid A receptor alpha 3 [Felis catus]
Length = 491
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSK+D++SRI+FP F + NL YW +Y+ +
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYVNRE 482
>gi|158287207|ref|XP_309302.4| AGAP011349-PA [Anopheles gambiae str. PEST]
gi|157019540|gb|EAA05037.5| AGAP011349-PA [Anopheles gambiae str. PEST]
Length = 579
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQE 149
NSVSKIDR SRI FP F +N+FYW Y++ E
Sbjct: 537 NSVSKIDRASRIFFPLLFLAINVFYWYLYLSRSE 570
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEI 36
+SF + ATI++FA VHYFTK GSGE F S DE+
Sbjct: 355 LSFGFIFATIIQFAIVHYFTKYGSGECYF--SVDEL 388
>gi|431917311|gb|ELK16844.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Pteropus alecto]
Length = 430
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 388 NSISKIDKMSRIVFPVLFGTFNLVYWATYL 417
>gi|189520296|ref|XP_001339511.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 [Danio
rerio]
Length = 453
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKID++SRI+FP FG NL YW +Y+
Sbjct: 414 NSVSKIDKMSRIVFPVLFGTFNLVYWATYL 443
>gi|30578386|ref|NP_795916.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Mus
musculus]
gi|66774012|sp|Q8BHJ7.1|GBRA5_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|26332589|dbj|BAC30012.1| unnamed protein product [Mus musculus]
gi|26350319|dbj|BAC38799.1| unnamed protein product [Mus musculus]
gi|38328408|gb|AAH62112.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5 [Mus
musculus]
Length = 463
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK G + D + K + + E + N
Sbjct: 328 YAFVFSALIEFATVNYFTKRG-------WAWDGKKALEAAK--IKKKERELILN------ 372
Query: 63 DYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ + + L PNI +Q N + + S++ Y NS+SKI
Sbjct: 373 --KSTNAFTTGKLTHPPNIPKEQPPAGTANAPTVSIKASEEKTAESKKTY----NSISKI 426
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP FG NL YW +Y+
Sbjct: 427 DKMSRIVFPILFGTFNLVYWATYL 450
>gi|4503861|ref|NP_000801.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Homo
sapiens]
gi|259013560|ref|NP_001158509.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Homo
sapiens]
gi|397515745|ref|XP_003828106.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Pan paniscus]
gi|397515747|ref|XP_003828107.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Pan paniscus]
gi|441615879|ref|XP_003272869.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5
[Nomascus leucogenys]
gi|399519|sp|P31644.1|GBRA5_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5;
AltName: Full=GABA(A) receptor subunit alpha-5; Flags:
Precursor
gi|182916|gb|AAA58490.1| GABA-benzodiazepine receptor alpha-5-subunit [Homo sapiens]
gi|251889|gb|AAB22608.1| gamma-aminobutyric acid receptor alpha5 subunit, GABA-A receptor
alpha5 subunit [human, Peptide, 462 aa]
gi|32880003|gb|AAP88832.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Homo sapiens]
gi|60654709|gb|AAX31919.1| gamma-aminobutyric acid [synthetic construct]
gi|60654711|gb|AAX31920.1| gamma-aminobutyric acid [synthetic construct]
gi|60654713|gb|AAX31921.1| gamma-aminobutyric acid [synthetic construct]
gi|60654715|gb|AAX31922.1| gamma-aminobutyric acid [synthetic construct]
gi|85567072|gb|AAI11980.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5, precursor [Homo
sapiens]
gi|109731251|gb|AAI13423.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Homo sapiens]
gi|123995183|gb|ABM85193.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [synthetic
construct]
gi|157928833|gb|ABW03702.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 [synthetic
construct]
gi|158261929|dbj|BAF83142.1| unnamed protein product [Homo sapiens]
gi|313883374|gb|ADR83173.1| gamma-aminobutyric acid (GABA) A receptor, alpha 5 (GABRA5),
transcript variant 1 [synthetic construct]
Length = 462
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK- 61
+ + + ++EFA V+YFTK G + E I K +
Sbjct: 328 YAFVFSALIEFATVNYFTKRGWAW--------------------DGKKALEAAKIKKKRE 367
Query: 62 -VDYRVCSVYEIRTLKVCPNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ + + + + PNI +Q N + + + S++ Y NS+S
Sbjct: 368 VILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTY----NSIS 423
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
KID++SRI+FP FG NL YW +Y+
Sbjct: 424 KIDKMSRIVFPVLFGTFNLVYWATYL 449
>gi|449499244|ref|XP_004176531.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-3-like [Taeniopygia guttata]
Length = 548
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSK+D++SRI+FP F + NL YW +Y+ +
Sbjct: 506 NSVSKVDKMSRIVFPVLFAIFNLVYWATYVNRE 538
>gi|297696128|ref|XP_002825264.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Pongo abelii]
Length = 366
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 324 NSISKIDKMSRIVFPVLFGTFNLVYWATYL 353
>gi|149027092|gb|EDL82834.1| gamma-aminobutyric acid A receptor, theta, isoform CRA_a [Rattus
norvegicus]
Length = 539
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ +I
Sbjct: 499 EGFSFQLFNPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHI 538
>gi|149027093|gb|EDL82835.1| gamma-aminobutyric acid A receptor, theta, isoform CRA_b [Rattus
norvegicus]
Length = 640
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ +I
Sbjct: 600 EGFSFQLFNPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHI 639
>gi|116268041|ref|NP_001070794.1| gamma-aminobutyric acid receptor subunit alpha-1 precursor [Danio
rerio]
gi|115528099|gb|AAI24698.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Danio rerio]
gi|182889028|gb|AAI64540.1| Gabra1 protein [Danio rerio]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSKIDR++RI FP FG NL YW +Y+ +
Sbjct: 416 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKK 448
>gi|432098879|gb|ELK28374.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Myotis davidii]
Length = 402
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + + P + +S+ E + I
Sbjct: 260 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKTQTAASPPATISKAMEPLEAEIVLHPD 314
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P E + V + V+ +
Sbjct: 315 SKYYLKKRISSL----TLPIVP-------APEASKVLT-RAPILPSTPVTPPPLSPAVGG 362
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 363 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 391
>gi|355777889|gb|EHH62925.1| GABA(A) receptor subunit alpha-5 [Macaca fascicularis]
Length = 412
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 370 NSISKIDKMSRIVFPVLFGTFNLVYWATYL 399
>gi|149027091|gb|EDL82833.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Rattus
norvegicus]
Length = 557
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 410 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 464
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + ++ ++A+ K ++ + Y NSVSK+
Sbjct: 465 TTYPINLAKDTEFSTISKAAAAPSASSTPTVIASPKTTYVQDSPAETKTY----NSVSKV 520
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 521 DKISRIIFPVLFAIFNLVYWATYV 544
>gi|326677934|ref|XP_002667403.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Danio
rerio]
Length = 442
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 94 ANEKYRKKREQEVSREGYQFHINSV----SKIDRVSRILFPASFGLLNLFYWISYIT 146
A +++ + + + ++G N++ S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 379 ATDRFSRPSQSDFHQQGSAVPANNMLIGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 435
>gi|402873745|ref|XP_003900722.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
1 [Papio anubis]
gi|402873747|ref|XP_003900723.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Papio anubis]
gi|355692546|gb|EHH27149.1| GABA(A) receptor subunit alpha-5 [Macaca mulatta]
gi|380787889|gb|AFE65820.1| gamma-aminobutyric acid receptor subunit alpha-5 precursor [Macaca
mulatta]
Length = 462
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 420 NSISKIDKMSRIVFPVLFGTFNLVYWATYL 449
>gi|224613266|gb|ACN60212.1| Gamma-aminobutyric acid receptor subunit alpha-1 precursor [Salmo
salar]
Length = 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSKIDR++RI FP FG NL YW +Y+ +
Sbjct: 115 NSVSKIDRIARIAFPLLFGTFNLVYWATYLNKK 147
>gi|37623906|gb|AAQ95598.1| GABA-A alpha 3 subunit [Macaca fascicularis]
Length = 56
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 14 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 43
>gi|410949389|ref|XP_003981405.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Felis
catus]
Length = 453
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRRAQIAASPPVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+
Sbjct: 366 SKYHLKKRISSL----TLPIVP-------SPEASKVLT-RAPILQSTPVTPPPLSAAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|118089523|ref|XP_420268.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Gallus
gallus]
Length = 492
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
NSVSK+D++SRI+FP F + NL YW +Y+ +
Sbjct: 450 NSVSKVDKMSRIVFPVLFAIFNLVYWATYVNRE 482
>gi|444518647|gb|ELV12283.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Tupaia chinensis]
Length = 413
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + + ++EFAAV+YFT + + P P + E E + +
Sbjct: 271 FAFVFSALIEFAAVNYFTNLQTQK----AKKKAQIATPSPVTISKAPEPLEAEIVLRSDS 326
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
Y + TL + P S+ +++ E + V+ SKID
Sbjct: 327 KYHLKKRITSLTLPIVP------SSGASKVLSREPILQ--STPVTPPPLSPAFGGTSKID 378
Query: 123 RVSRILFPASFGLLNLFYWISYIT 146
+ SRILFP +F NL YWI Y++
Sbjct: 379 QYSRILFPVAFAGFNLVYWIVYLS 402
>gi|348551208|ref|XP_003461422.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Cavia porcellus]
Length = 491
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 449 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 478
>gi|57112927|ref|XP_549343.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Canis
lupus familiaris]
Length = 492
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTP-TIIASPKTTYVQDIPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>gi|27806983|ref|NP_776967.1| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Bos
taurus]
gi|120759|sp|P10064.1|GBRA3_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|373|emb|CAA30925.1| unnamed protein product [Bos taurus]
Length = 492
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|410989569|ref|XP_004001031.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Felis
catus]
Length = 492
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|148694612|gb|EDL26559.1| gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
Length = 629
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ ++
Sbjct: 589 EGFSFQLFKPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHV 628
>gi|431921021|gb|ELK18789.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Pteropus alecto]
Length = 389
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 347 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 376
>gi|296471150|tpg|DAA13265.1| TPA: gamma-aminobutyric acid receptor subunit alpha-3 precursor
[Bos taurus]
gi|440911793|gb|ELR61428.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Bos grunniens
mutus]
Length = 492
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|10048422|ref|NP_065234.1| gamma-aminobutyric acid receptor subunit theta precursor [Mus
musculus]
gi|13959379|sp|Q9JLF1.1|GBRT_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit theta;
AltName: Full=GABA(A) receptor subunit theta; Flags:
Precursor
gi|7861738|gb|AAF70381.1|AF189260_1 GABA-A receptor theta subunit [Mus musculus]
gi|111600476|gb|AAI19077.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
gi|111601080|gb|AAI19075.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
Length = 638
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ ++
Sbjct: 598 EGFSFQLFKPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHV 637
>gi|26333069|dbj|BAC30252.1| unnamed protein product [Mus musculus]
gi|74145296|dbj|BAE22270.1| unnamed protein product [Mus musculus]
gi|111307395|gb|AAI20687.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
gi|111601259|gb|AAI19318.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
Length = 492
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|247269171|ref|NP_032093.3| gamma-aminobutyric acid receptor subunit alpha-3 precursor [Mus
musculus]
gi|120760|sp|P26049.1|GBRA3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3;
AltName: Full=GABA(A) receptor subunit alpha-3; Flags:
Precursor
gi|193391|gb|AAA37651.1| GABA-A receptor alpha-3 subunit [Mus musculus]
gi|148694613|gb|EDL26560.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 [Mus
musculus]
Length = 492
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|344299194|ref|XP_003421272.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Loxodonta africana]
Length = 492
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|291410177|ref|XP_002721371.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 3-like
[Oryctolagus cuniculus]
Length = 492
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|432099683|gb|ELK28768.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Myotis davidii]
Length = 335
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 293 NSVSKVDKISRIVFPVLFAIFNLVYWATYV 322
>gi|327268064|ref|XP_003218818.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Anolis carolinensis]
Length = 462
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 420 NSISKIDKMSRIVFPVLFGTFNLVYWATYL 449
>gi|395545988|ref|XP_003774877.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 496
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 454 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 483
>gi|149052306|gb|EDM04123.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_b [Rattus norvegicus]
Length = 443
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS +E E E +H K
Sbjct: 301 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAAKPPVAKSKTTESLEAEIV-VHSDSK 357
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P S++ +++ V+ I S
Sbjct: 358 YHLKKRISSL----TLPIVP------SSEASKVLSRTPILP--STPVTPPLLLPAIGGTS 405
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 406 KIDQYSRILFPVAFAGFNLVYWIVYLS 432
>gi|149052305|gb|EDM04122.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Rattus norvegicus]
Length = 453
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS +E E E +H K
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAAKPPVAKSKTTESLEAEIV-VHSDSK 367
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P S++ +++ V+ I S
Sbjct: 368 YHLKKRISSL----TLPIVP------SSEASKVLSRTPILP--STPVTPPLLLPAIGGTS 415
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 416 KIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|338729654|ref|XP_003365949.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
2 [Equus caballus]
Length = 516
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 474 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 503
>gi|126342460|ref|XP_001376959.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Monodelphis domestica]
Length = 490
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 448 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 477
>gi|194228379|ref|XP_001496783.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
1 [Equus caballus]
Length = 492
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
>gi|149640085|ref|XP_001514229.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3
[Ornithorhynchus anatinus]
Length = 495
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 453 NSVSKVDKISRIIFPVLFAIFNLVYWATYV 482
>gi|390460929|ref|XP_002745948.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Callithrix jacchus]
Length = 443
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 40/155 (25%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEI------PFLVSSDEIRVHPH----PKSYVSEDE 50
+ F + A ++E+ +HYFT G+ P +S +HP P + +S +
Sbjct: 317 VCFIFVFAALMEYGTLHYFTSNKKGKTTTKDRKPKNKASVSPSLHPGSTLIPMNNISVPQ 376
Query: 51 EDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREG 110
ED DY Y+ K C + E R REG
Sbjct: 377 ED----------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG 408
Query: 111 YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 409 -RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 441
>gi|354495032|ref|XP_003509636.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Cricetulus griseus]
Length = 443
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT S + + + P +S+ E + I
Sbjct: 301 FAFVFSALIEFAAVNYFTNLQSQR-----AERKAQTTAPPPVAISKATEPREAEIIVHSE 355
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+ +
Sbjct: 356 SKYHLKKRISSL----TLPIVP-------SSEASKVLS-RMPILHTTPVTPPPLLPAVGG 403
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 404 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 432
>gi|198420848|ref|XP_002119693.1| PREDICTED: similar to gamma-aminobutyric acid (GABA) A receptor,
beta 3 [Ciona intestinalis]
Length = 499
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 32/130 (24%)
Query: 48 EDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCP-----------------NIVDQLSTDEV 90
++E +IH+I + IR + CP N+ Q +
Sbjct: 368 DEESTSPGSIHQIAAGWSDNEENAIRHISTCPHANHARPLPTRRRNVGFNVATQGRARGM 427
Query: 91 NLVANEKYR---------KKREQEVSREGYQF------HINSVSKIDRVSRILFPASFGL 135
+ AN K R KKR+ SR I+ VS ID+V+R+ FPASF +
Sbjct: 428 HNAANGKRRGQPSRNSVGKKRKGYASRAKKSLSALKVPKISDVSIIDKVARVAFPASFAI 487
Query: 136 LNLFYWISYI 145
N YW YI
Sbjct: 488 FNFVYWTYYI 497
>gi|11177872|ref|NP_068613.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Rattus
norvegicus]
gi|232127|sp|P30191.1|GBRA6_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|204214|gb|AAC42034.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|288180|emb|CAA39273.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|227076|prf||1613454A GABAa receptor alpha6
Length = 453
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS +E E E +H K
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQKAE--RQAQTAAKPPVAKSKTTESLEAEIV-VHSDSK 367
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P S++ +++ V+ I S
Sbjct: 368 YHLKKRISSL----TLPIVP------SSEASKVLSRTPILP--STPVTPPLLLPAIGGTS 415
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 416 KIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|47192719|emb|CAF93048.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
VSKID SRI FP +FGL NL YWI Y+
Sbjct: 131 VSKIDSYSRIFFPTAFGLFNLVYWIGYL 158
>gi|354495030|ref|XP_003509635.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Cricetulus griseus]
Length = 453
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT S + + + P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQR-----AERKAQTTAPPPVAISKATEPREAEIIVHSE 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+ +
Sbjct: 366 SKYHLKKRISSL----TLPIVP-------SSEASKVLS-RMPILHTTPVTPPPLLPAVGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|426230034|ref|XP_004009088.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Ovis
aries]
Length = 453
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +++ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAASPPVTIAKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+
Sbjct: 366 SKYHLKKRITSL----TLPIVP-------SPEASKVLT-RAPILQSTPVTPPPLSPTFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|332238943|ref|XP_003268662.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Nomascus leucogenys]
Length = 453
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|405957410|gb|EKC23622.1| hypothetical protein CGI_10013185 [Crassostrea gigas]
Length = 567
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Query: 4 FYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----HK 59
FY +A I++++AV+YFTK PK + D+EDE N+
Sbjct: 447 FYNLAAIIQYSAVNYFTKI------------------LPKEGGASDDEDETENVLNEDQN 488
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+D+ E +T C + + L+ N ++R + + + NSVS
Sbjct: 489 GVLDWNSTIGKETQT--GCMILFCRC------LLGNFRFR----YNMVKSADAANGNSVS 536
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
ID +SR +FP SF L FYW Y+
Sbjct: 537 SIDILSRYIFPLSFCLFQAFYWAWYL 562
>gi|114603240|ref|XP_001144345.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Pan troglodytes]
Length = 453
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPSVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|39930467|ref|NP_113921.1| gamma-aminobutyric acid receptor subunit theta precursor [Rattus
norvegicus]
gi|16225670|gb|AAL15939.1| GABA theta subunit [Rattus norvegicus]
Length = 635
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ ++
Sbjct: 595 EGFSFQLFNPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHM 634
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 93 VANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
VA+ RE+ R ++ I ++ ID+ SRI+FP SF L N+FYWI+Y
Sbjct: 416 VASNVVSNLREK---RAAFKVEIKDINVIDKYSRIIFPLSFVLFNIFYWITY 464
>gi|449266635|gb|EMC77675.1| Gamma-aminobutyric acid receptor subunit alpha-3, partial [Columba
livia]
Length = 443
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 6/47 (12%)
Query: 101 KREQEV--SREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+RE+++ S++ Y NSVSK+D++SRI+FP F + NL YW +Y+
Sbjct: 388 RREEKLPESKKTY----NSVSKVDKMSRIVFPVLFAIFNLVYWATYV 430
>gi|5804939|emb|CAA38992.1| GABA(A) receptor gamma-1 subunit [Mus musculus]
Length = 465
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R Q EG HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 421 RLQNWVLEGRAIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|296192673|ref|XP_002744174.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Callithrix jacchus]
Length = 453
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + +
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIASPPPVTISKATEPLEAEVVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSPEANKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|297676573|ref|XP_002816205.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pongo
abelii]
Length = 453
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANEVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|326672928|ref|XP_684047.4| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Danio rerio]
Length = 432
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
VSKID SRI FP +FGL NL YWI Y+
Sbjct: 403 VSKIDSYSRIFFPTAFGLFNLVYWIGYL 430
>gi|47211172|emb|CAF91158.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
IN SKID+ +RI FP SFG N+ YW+ Y++
Sbjct: 478 INGTSKIDKYARIFFPVSFGAFNIVYWVIYLS 509
>gi|432941133|ref|XP_004082821.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oryzias latipes]
Length = 448
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
VSKID SRI FP +FGL NL YWI Y+
Sbjct: 419 VSKIDSYSRIFFPTAFGLFNLVYWIGYL 446
>gi|348541471|ref|XP_003458210.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oreochromis niloticus]
Length = 469
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
VSKID SRI FP +FGL NL YWI Y+
Sbjct: 440 VSKIDSYSRIFFPTAFGLFNLVYWIGYL 467
>gi|301619761|ref|XP_002939243.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Xenopus (Silurana) tropicalis]
Length = 480
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVS+ID++SRI+FP F + NL YW +Y+
Sbjct: 439 NSVSRIDKISRIVFPVLFAIFNLVYWATYV 468
>gi|109080427|ref|XP_001109231.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5 isoform
2 [Macaca mulatta]
Length = 462
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
N++SKID++SRI+FP FG NL YW +Y+
Sbjct: 420 NNISKIDKMSRIVFPVLFGTFNLVYWFTYL 449
>gi|354504643|ref|XP_003514383.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit theta-like [Cricetulus griseus]
Length = 629
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+DR SR LFP SFGL N+ YW+ +I
Sbjct: 589 EGFSFQLFNPDQVPKVDRWSRFLFPLSFGLFNVVYWLYHI 628
>gi|344248984|gb|EGW05088.1| Gamma-aminobutyric acid receptor subunit theta [Cricetulus griseus]
Length = 619
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+DR SR LFP SFGL N+ YW+ +I
Sbjct: 579 EGFSFQLFNPDQVPKVDRWSRFLFPLSFGLFNVVYWLYHI 618
>gi|313224230|emb|CBY20019.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 25/159 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F YC A ++EFA+V+YFT L+ E+ + S+ TN V
Sbjct: 297 FTYCFAALIEFASVNYFTVIRPRA---LIQQLEVNGNDSDSGLDSDGNYQPSTN----GV 349
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK-I 121
R S ++S + + + + G F + I
Sbjct: 350 RRRFAS--------------SKMSNSDGGSASKSRPGSILSRIRGGSGSSFWTQLANNHI 395
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPTIS 160
DRVSR++FP +F L N+ YW +Y++ E + P TIS
Sbjct: 396 DRVSRVMFPLTFFLFNVVYWFAYLSVSERVL---PRTIS 431
>gi|313222704|emb|CBY41701.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 25/159 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F YC A ++EFA+V+YFT L+ E+ + S+ TN V
Sbjct: 39 FTYCFAALIEFASVNYFTVIRPRA---LIQQLEVNGNDSDSGLDSDGNYQPSTN----GV 91
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK-I 121
R S ++S + + + + G F + I
Sbjct: 92 RRRFAS--------------SKMSNSDGGSASKSRPGSILSRIRGGSGSSFWTQLANNHI 137
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPTIS 160
DRVSR++FP +F L N+ YW +Y++ E + P TIS
Sbjct: 138 DRVSRVMFPLTFFLFNVVYWFAYLSVSERVL---PRTIS 173
>gi|155372219|ref|NP_001094720.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Bos
taurus]
gi|151553969|gb|AAI49938.1| GABRG1 protein [Bos taurus]
Length = 465
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 38/152 (25%)
Query: 3 FFYCIATILEFAAVHYFT-----KTGSGEIPFLVSSDEIRVHPH----PKSYVSEDEEDE 53
F + A ++E+ +HYFT KT + P L +S +HP P + +S + ++
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKKVKTTREKKPKLKTSMSSGLHPGSTLIPMNSLSLPQGED 400
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
DY Y+ K C + E R REG +
Sbjct: 401 ---------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-RI 432
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 433 HIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|405975278|gb|EKC39856.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 316
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 94 ANEKYRKKREQEVS-REGYQF----HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
N K K E S REG+ F + IDRVSR LFPA+F L N+ YW+ Y+
Sbjct: 235 GNAKRSPKTESPTSQREGFSFTPSKNREKARNIDRVSRFLFPAAFILFNVGYWLVYLVLW 294
Query: 149 E 149
E
Sbjct: 295 E 295
>gi|7861741|gb|AAF70382.1|AF189261_1 GABA-A receptor theta subunit, partial [Rattus norvegicus]
Length = 171
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWI 142
EG+ F + N V K+DR SR LFP SFGL N+ YW+
Sbjct: 133 EGFSFQLFNPNRVPKVDRWSRFLFPLSFGLFNVVYWL 169
>gi|193786899|dbj|BAG52222.1| unnamed protein product [Homo sapiens]
Length = 234
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + + P +S+ E + I
Sbjct: 92 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQFAAPPTVTISKATEPLEAEIVLHPD 146
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 147 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLSPAFGG 194
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYITD 147
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 195 TSKIDQYSRILFPVAFAGFNLVYWVVYLSK 224
>gi|327283474|ref|XP_003226466.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-3-like [Anolis carolinensis]
Length = 474
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 3 FFYCIATILEFAAVHYFTK-TGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT-NIHKI 60
+ + + ++EFAAV+YFTK + + + ++ + E++ K V+ ++ T NI +
Sbjct: 326 YAFVFSALIEFAAVNYFTKRSWAWDGKKVLEAQEMK----KKEPVTLAKKTNNTYNI--V 379
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
Y + E + + +V K R +E E + + NSVSK
Sbjct: 380 GTTYALNITKEPGLPTISKSAASTTPGTPATVVVPPK--APRLEERPPENKKTY-NSVSK 436
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D++SRI+FP F + N+ YW +Y+
Sbjct: 437 VDKMSRIVFPVLFAIFNMVYWATYV 461
>gi|397473110|ref|XP_003808063.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pan
paniscus]
Length = 453
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F N+ YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNIVYWVVYLS 442
>gi|291385730|ref|XP_002709329.1| PREDICTED: gamma-aminobutyric acid A receptor, gamma 1 [Oryctolagus
cuniculus]
Length = 628
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 591 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 626
>gi|410915462|ref|XP_003971206.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Takifugu rubripes]
Length = 472
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 2 SFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
SF + +++E+AAV+YFT + +++ P SY + + H
Sbjct: 342 SFLFVFLSVIEYAAVNYFTTVEEMK--------KLKRAKIPNSYNATEAMAFDGCFHDTD 393
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+D + S+ E+ + PN + A + + R + + ++ F +++ I
Sbjct: 394 ID--LTSLPEVAS---TPNTERNTQARNSTVSAPTEGTRLRRKNLLKQHLSFIMSNSYMI 448
Query: 122 DRVSRILFPASFGLLNLFYWISY 144
D SR++FP ++ L N+ YW Y
Sbjct: 449 DSYSRVIFPMAYLLFNIIYWSLY 471
>gi|395542843|ref|XP_003773334.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Sarcophilus harrisii]
Length = 594
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI V+KID SRI FP +F L NL YWI Y+
Sbjct: 557 REG-RIHIR-VAKIDSYSRIFFPTAFALFNLVYWIGYL 592
>gi|334331365|ref|XP_001372541.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Monodelphis domestica]
Length = 571
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI V+KID SRI FP +F L NL YWI Y+
Sbjct: 534 REG-RIHIR-VAKIDSYSRIFFPTAFALFNLVYWIGYL 569
>gi|354489260|ref|XP_003506782.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Cricetulus
griseus]
Length = 425
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + V E E+ TNI
Sbjct: 297 ICFSFVFGALLEYAVAHY--------------SSLQQMAVKDRGTVKESEDVNITNI--- 339
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D ++ ++ + A++K++ +++ R F I + S
Sbjct: 340 -INSSISSFKRKISFASIEISGDNVNYSDLTMKASDKFKFVFREKIGRIVDYFTIQNPSN 398
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 399 VDRYSKLLFPLIFMLANVFYWAYYM 423
>gi|395817130|ref|XP_003782028.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Otolemur garnettii]
Length = 453
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEE--DEQTNIH-- 58
F + + ++EFAAV+YFT + + + + ++ VS+ E D + +H
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQMAASTPVTVSKATEPLDAEIVLHPD 365
Query: 59 -KIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
+ + R+ S+ TL + P ST+ ++ F
Sbjct: 366 SRYHLKKRITSL----TLPIVP------STEASKVLTRAPILPPTPVTPPPLSPAF--GG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|17981007|gb|AAL50804.1|AF453437_1 GABAa receptor gamma2 subunit [Morone americana]
Length = 472
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++KID +RI FP +FGL NL YW+SY+
Sbjct: 435 RHG-RLHIR-IAKIDSYARIFFPTAFGLFNLVYWVSYL 470
>gi|326680902|ref|XP_002666117.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3,
partial [Danio rerio]
Length = 181
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 101 KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPP 157
K + E EG + + N VSK+D++SRI+FP F + NL YW +Y+ + PP
Sbjct: 125 KMDGEYVPEGRKSY-NRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPTIERSSPP 180
>gi|47219234|emb|CAG11696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 79
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 103 EQEVSREGYQFHINSV----SKIDRVSRILFPASFGLLNLFYWISYIT 146
Q ++G N+V S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 21 AQAFLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 68
>gi|348528651|ref|XP_003451830.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oreochromis niloticus]
Length = 556
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP SFG N+ YW+ Y++
Sbjct: 516 MGGTSKIDKYARILFPVSFGAFNMVYWVVYLS 547
>gi|22122485|ref|NP_666129.1| gamma-aminobutyric acid receptor subunit pi precursor [Mus
musculus]
gi|62901524|sp|Q8QZW7.1|GBRP_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|19343800|gb|AAH25550.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|20071049|gb|AAH27245.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|21410495|gb|AAH31196.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|23272171|gb|AAH23693.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|26324910|dbj|BAC26209.1| unnamed protein product [Mus musculus]
gi|74141143|dbj|BAE35885.1| unnamed protein product [Mus musculus]
gi|148691791|gb|EDL23738.1| gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
Length = 440
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++SR F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVNYSDLTMKASDKFKFVFREKISRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
>gi|20379971|gb|AAH27839.1| Gabrp protein, partial [Mus musculus]
Length = 356
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++SR F I + S +DR S++LFP F L N+FYW
Sbjct: 292 DNVNYSDLTMKASDKFKFVFREKISRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 351
Query: 143 SYI 145
Y+
Sbjct: 352 YYM 354
>gi|149702782|ref|XP_001496252.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Equus caballus]
Length = 465
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 46/158 (29%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPF---LVSSDEIRVHPHPKSYV----------S 47
+ F + A ++E+ +HYFT G+ L + I HP S +
Sbjct: 339 VCFIFVFAALMEYGTLHYFTSNKKGKTTRNRKLKNKASISPGLHPGSTLIPMNNISLPQG 398
Query: 48 EDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVS 107
EDE+ Q K + C + RT
Sbjct: 399 EDEDGYQCLEGKDCASF-FCCFEDCRT------------------------------GSW 427
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|194219631|ref|XP_001503447.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Equus
caballus]
Length = 453
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAASPPVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
+ + R+ S+ +L + P E N V + + V+
Sbjct: 366 SRYHLKKRITSL----SLPIVP-------PPETNKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SR+LFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRMLFPVAFAGFNLVYWVVYLS 442
>gi|109079634|ref|XP_001086065.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Macaca
mulatta]
gi|402873304|ref|XP_003900519.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Papio
anubis]
gi|355691820|gb|EHH27005.1| hypothetical protein EGK_17099 [Macaca mulatta]
gi|355750394|gb|EHH54732.1| hypothetical protein EGM_15624 [Macaca fascicularis]
Length = 453
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E + V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEASKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|410915042|ref|XP_003970996.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Takifugu rubripes]
Length = 457
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 418 LTGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 449
>gi|260790997|ref|XP_002590527.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
gi|229275721|gb|EEN46538.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
Length = 347
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 81 IVDQLSTDEVNLVANEKYRKKRE-----QEVSREGYQFHINSVSKIDRVSRILFPASFGL 135
IV+ +S + L+ +++KK + E+ E + I +DR SR++FP +F +
Sbjct: 274 IVNHISRQDKRLMKKLRHKKKNDPCSGDAELRLEAKRLAIRRSHAVDRASRVVFPLAFLI 333
Query: 136 LNLFYWI 142
NLFYW+
Sbjct: 334 FNLFYWL 340
>gi|62955617|ref|NP_001017822.1| gamma-aminobutyric acid receptor subunit alpha-4 [Danio rerio]
gi|62202172|gb|AAH92794.1| Zgc:110204 [Danio rerio]
gi|182889054|gb|AAI64581.1| Zgc:110204 protein [Danio rerio]
Length = 557
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
KK+E + + SKID +RILFP SFG N+ YW+ Y++
Sbjct: 502 KKKEAKAQPQPAAPATGGASKIDEYARILFPVSFGAFNMVYWVVYLS 548
>gi|426231653|ref|XP_004009853.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Ovis
aries]
Length = 465
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 38/152 (25%)
Query: 3 FFYCIATILEFAAVHYFT-----KTGSGEIPFLVSSDEIRVHPH----PKSYVSEDEEDE 53
F + A ++E+ +HYFT KT + P + +S +HP P + +S + ++
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKKVKTSREKKPKIKTSMSSGLHPGSTLIPMNSLSLPQGED 400
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
DY Y+ K C + E R REG +
Sbjct: 401 ---------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-RI 432
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 433 HIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|348519036|ref|XP_003447037.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Oreochromis niloticus]
Length = 436
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 397 LTGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 428
>gi|344244665|gb|EGW00769.1| Gamma-aminobutyric acid receptor subunit pi [Cricetulus griseus]
Length = 254
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + V E E+ TNI
Sbjct: 126 ICFSFVFGALLEYAVAHY--------------SSLQQMAVKDRGTVKESEDVNITNI--- 168
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D ++ ++ + A++K++ +++ R F I + S
Sbjct: 169 -INSSISSFKRKISFASIEISGDNVNYSDLTMKASDKFKFVFREKIGRIVDYFTIQNPSN 227
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 228 VDRYSKLLFPLIFMLANVFYWAYYM 252
>gi|157389018|ref|NP_000802.2| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Homo
sapiens]
gi|126302548|sp|Q16445.2|GBRA6_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|64654354|gb|AAH96242.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|64654801|gb|AAH96241.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563331|gb|AAH99641.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563375|gb|AAH99640.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|119581946|gb|EAW61542.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|158259945|dbj|BAF82150.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + + P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQFAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|327273670|ref|XP_003221603.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Anolis carolinensis]
Length = 449
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI V+KID SRI FP +F L NL YWI Y+
Sbjct: 412 REG-RIHIR-VAKIDSYSRIFFPTAFALFNLVYWIGYL 447
>gi|326919236|ref|XP_003205888.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Meleagris gallopavo]
Length = 453
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI V+KID SRI FP +F L NL YWI Y+
Sbjct: 416 REG-RIHIR-VAKIDSYSRIFFPTAFALFNLVYWIGYL 451
>gi|449500869|ref|XP_002194402.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Taeniopygia guttata]
Length = 564
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YWI Y+
Sbjct: 527 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWIGYL 562
>gi|403284721|ref|XP_003933706.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Saimiri boliviensis boliviensis]
Length = 465
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 40/153 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEI------PFLVSSDEIRVHPH----PKSYVSEDEED 52
F + A ++E+ +HYFT G P +S +HP P + +S ++D
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKRGRTTTKDRKPKNKASMSPGLHPGSTLIPMNNISVPQDD 400
Query: 53 EQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
DY Y+ K C + E R REG +
Sbjct: 401 ----------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-R 431
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 432 IHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|194871722|ref|XP_001972894.1| GG13634 [Drosophila erecta]
gi|190654677|gb|EDV51920.1| GG13634 [Drosophila erecta]
Length = 693
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSS-DEIRVHPHPKSYVSEDEEDEQTNIHK 59
+SF + ATIL+FA VHY+TK GSGE F++ D + SE ++ I++
Sbjct: 464 LSFGFIFATILQFAVVHYYTKYGSGECYFIIEELDSDSAESETEPLTSEFRGSTESKIYE 523
Query: 60 IKVDYRVCSV 69
+ + +C++
Sbjct: 524 V-IPLSMCAI 532
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 42 PKSYVSEDEEDEQTNIHKIK---VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKY 98
P++ EDE+DEQT + + + + P I Y
Sbjct: 576 PRADSDEDEDDEQTQLRANEAPTTSAAAAAAAAAQAAAQAPRISPPTGGRR-----RMSY 630
Query: 99 RKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 631 YRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 689
>gi|432949781|ref|XP_004084255.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Oryzias latipes]
Length = 473
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 434 LTGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 465
>gi|410913345|ref|XP_003970149.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Takifugu rubripes]
Length = 556
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I+ SKID+ +RI FP SFG N+ YW+ Y++
Sbjct: 516 IDGTSKIDKYARIFFPVSFGAFNIVYWVIYLS 547
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 32/158 (20%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 264 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 308
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK + R Q
Sbjct: 309 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRK--PLSIRRRASQ 366
Query: 113 FHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 367 LKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 404
>gi|440908371|gb|ELR58393.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Bos grunniens
mutus]
Length = 465
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 38/152 (25%)
Query: 3 FFYCIATILEFAAVHYFT-----KTGSGEIPFLVSSDEIRVHPH----PKSYVSEDEEDE 53
F + A ++E+ +HYFT KT + P + +S +HP P + +S + ++
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKKVKTTREKKPKIKTSMSSGLHPGSTLIPMNSLSLPQGED 400
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
DY Y+ K C + E R REG +
Sbjct: 401 ---------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-RI 432
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 433 HIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|118150476|ref|NP_001071277.1| glutamate-gated chloride channel precursor [Apis mellifera]
gi|110555516|gb|ABG75738.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I P SE E+ ++ +V+
Sbjct: 314 FVFGALLEFALVNYASRSD-------MHSDNIEKKYPP----SETEQSTSMDLPSDQVEP 362
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 363 DNSSNFAMKPLVRQPE--DTMSVDRMQHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 418
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 419 SRIFFPIVFAFFNLAYWSTYLFREE 443
>gi|110555514|gb|ABG75737.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I P SE E+ ++ +V+
Sbjct: 314 FVFGALLEFALVNYASRSD-------MHSDNIEKKYPP----SETEQSTSMDLPSDQVEP 362
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 363 DNSSNFAMKPLVRQPE--DTMSVDRMQHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 418
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 419 SRIFFPIVFAFFNLAYWSTYLFREE 443
>gi|340724890|ref|XP_003400811.1| PREDICTED: glutamate-gated chloride channel-like [Bombus
terrestris]
Length = 452
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I P SE E+ ++ +V+
Sbjct: 319 FVFGALLEFALVNYASRSD-------MHSDNIEKKYPP----SETEQSTSMDLPSDQVEP 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 368 DNSSNFAMKPLVRQPE--DTMSMDRMQHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 423
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 424 SRIFFPIVFAFFNLTYWSTYLFREE 448
>gi|197100468|ref|NP_001127403.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Pongo
abelii]
gi|55729175|emb|CAH91324.1| hypothetical protein [Pongo abelii]
Length = 465
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 40/153 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFL------VSSDEIRVHPH----PKSYVSEDEED 52
F + A ++E+ +HYFT G+ +S +HP P + +S +ED
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKKGKTATKDRKLKNKASMTPGLHPGSTLIPMNSISVSQED 400
Query: 53 EQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
DY Y+ K C + E R REG +
Sbjct: 401 ----------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-R 431
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 432 IHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|351695952|gb|EHA98870.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Heterocephalus
glaber]
Length = 465
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 44/157 (28%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIP--------FLVSSDEIRVHPH----PKSYVSE 48
+ F + A ++E+ +HYFT G+ LVS D VHP P + ++
Sbjct: 339 VCFIFVFAALMEYGTLHYFTSNKKGKTTRERKIKNRALVSPD---VHPGSTLIPMNSIAL 395
Query: 49 DEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSR 108
+ ++ DY Y+ K C + E R R
Sbjct: 396 PQGED---------DYG----YQCLEGKDCASF----------FCCFEDCRAGSW----R 428
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 429 EG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|73954094|ref|XP_546263.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Canis
lupus familiaris]
Length = 453
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRRAQNAASPPVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ TL + P + E + V + + V+
Sbjct: 366 SKYHLKKRITSL----TLPIVP-------SPEASKVLT-RAPILQSTPVTPPPLSPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|350422018|ref|XP_003493030.1| PREDICTED: glutamate-gated chloride channel-like isoform 2 [Bombus
impatiens]
Length = 452
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I P SE E+ ++ +V+
Sbjct: 319 FVFGALLEFALVNYASRSD-------MHSDNIEKKYPP----SETEQSTSMDLPSDQVEP 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 368 DNSSNFAMKPLVRQPE--DTMSMDRMEHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 423
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 424 SRIFFPIVFAFFNLAYWSAYLFRKE 448
>gi|449273444|gb|EMC82938.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Columba livia]
Length = 269
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YWI Y+
Sbjct: 232 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWIGYL 267
>gi|348525970|ref|XP_003450494.1| PREDICTED: hypothetical protein LOC100698500 [Oreochromis niloticus]
Length = 1418
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
N VSK+D++SRI+FP F + NL YW +Y+
Sbjct: 1376 NRVSKVDKISRIIFPVLFFIFNLGYWATYV 1405
>gi|348518730|ref|XP_003446884.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oreochromis niloticus]
Length = 470
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 2 SFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
SF + +++E+AAV+YFT + +++ P SY + + H +
Sbjct: 342 SFLFVFLSVIEYAAVNYFTTVEEMK--------KLKRAKMPTSYNAAEAMAFDGCFHDNE 393
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+D PN + + + A + + R + ++ F +++ I
Sbjct: 394 IDLASLPA-------STPNTERNIQSRNSTVSAPTEGTRLRRKHPLKQNLSFIMSNSYMI 446
Query: 122 DRVSRILFPASFGLLNLFYWISY 144
D SR+LFP ++ L N+ YW Y
Sbjct: 447 DSYSRVLFPLAYLLFNIIYWSMY 469
>gi|118090560|ref|XP_420725.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Gallus
gallus]
Length = 464
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YWI Y+
Sbjct: 427 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWIGYL 462
>gi|350422015|ref|XP_003493029.1| PREDICTED: glutamate-gated chloride channel-like isoform 1 [Bombus
impatiens]
Length = 452
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I P SE E+ ++ +V+
Sbjct: 319 FVFGALLEFALVNYASRSD-------MHSDNIEKKYPP----SETEQSTSMDLPSDQVEP 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 368 DNSSNFAMKPLVRQPE--DTMSMDRMEHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 423
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 424 SRIFFPIVFAFFNLAYWSAYLFRKE 448
>gi|444522439|gb|ELV13385.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Tupaia chinensis]
Length = 359
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 322 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 357
>gi|348574947|ref|XP_003473251.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Cavia
porcellus]
Length = 440
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + V E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGKVKEAEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + +++ +K++ +++SR F I + S
Sbjct: 355 -INSSISSFKRKISFATIEISGDNVDYSNLSMKTCDKFKFVFREKISRIIDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|432109369|gb|ELK33627.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Myotis davidii]
Length = 211
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 172 TSKIDKYARILFPVTFGAFNMVYWVVYLS 200
>gi|431893823|gb|ELK03640.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Pteropus alecto]
Length = 313
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 276 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 311
>gi|148705863|gb|EDL37810.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_a [Mus musculus]
Length = 603
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 562 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 592
>gi|170048762|ref|XP_001870768.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870754|gb|EDS34137.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 515
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 1 MSFFYCIATILEFAAVHYFTK 21
M+F YCIAT+LEFA VHYFTK
Sbjct: 484 MNFIYCIATLLEFAGVHYFTK 504
>gi|327260699|ref|XP_003215171.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Anolis carolinensis]
Length = 614
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YW+ Y++
Sbjct: 562 IGGTSKIDQYSRILFPVAFAGFNLVYWVVYLS 593
>gi|21411386|gb|AAH31087.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|123980146|gb|ABM81902.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
gi|123994949|gb|ABM85076.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
Length = 465
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 40/155 (25%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL------VSSDEIRVHPH----PKSYVSEDE 50
+ F + A ++E+ +HYFT G+ +S +HP P + +S +
Sbjct: 339 VCFIFVFAALMEYGTLHYFTSNQKGKTATKDRKLKNKASMTPGLHPGSTLIPMNNISVPQ 398
Query: 51 EDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREG 110
ED DY Y+ K C + E R REG
Sbjct: 399 ED----------DYE----YQCLEGKDCASF----------FCCFEDCRTGSW----REG 430
Query: 111 YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 431 -RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|350587477|ref|XP_003129000.3| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Sus scrofa]
Length = 430
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 393 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 428
>gi|332218612|ref|XP_003258448.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Nomascus leucogenys]
Length = 465
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 40/153 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFL------VSSDEIRVHPH----PKSYVSEDEED 52
F + A ++E+ +HYFT G+ +S +HP P + +S +ED
Sbjct: 341 FIFVFAALMEYGTLHYFTSNKKGKTATKDRKLKNKASMTPGLHPGSTLIPMNSISVPQED 400
Query: 53 EQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
DY Y+ K C + E R REG +
Sbjct: 401 ----------DYG----YQCLEGKDCASF----------FCCFEDCRTGSW----REG-R 431
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 432 IHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|426344234|ref|XP_004038679.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Gorilla gorilla gorilla]
Length = 443
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 406 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 441
>gi|45384230|ref|NP_990389.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Gallus
gallus]
gi|3023835|sp|Q90845.1|GBRA6_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|1149507|emb|CAA64069.1| GABA-A receptor a6 subunit [Gallus gallus]
gi|1589637|prf||2211380A GABA type A receptor:SUBUNIT=alpha6
Length = 465
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYV-SEDE----EDEQTNI 57
F + + ++EFAAV+YFT + + + V +EDE D N+
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEIVSHSDSNCNL 370
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYR-KKREQEVSREGYQFHIN 116
K RV SV + DQ + E ++V+N + + +
Sbjct: 371 KK-----RVNSV---------TSQADQ--SPEASIVSNSASQCQPVSAPPPAPPAPPPVG 414
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 415 GTSKIDQYSRILFPVAFAGFNLVYWVVYLS 444
>gi|355749252|gb|EHH53651.1| GABA(A) receptor subunit gamma-1 [Macaca fascicularis]
Length = 465
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|74145870|dbj|BAE24201.1| unnamed protein product [Mus musculus]
Length = 578
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 537 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 567
>gi|402869278|ref|XP_003898690.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Papio
anubis]
Length = 465
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|158260635|dbj|BAF82495.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|380786797|gb|AFE65274.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Macaca
mulatta]
Length = 465
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|31742490|ref|NP_775807.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Homo
sapiens]
gi|114594945|ref|XP_526775.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 isoform
2 [Pan troglodytes]
gi|397490167|ref|XP_003816079.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Pan
paniscus]
gi|209572630|sp|Q8N1C3.2|GBRG1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|57999453|emb|CAI45936.1| hypothetical protein [Homo sapiens]
gi|119613427|gb|EAW93021.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|193783776|dbj|BAG53758.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|326928336|ref|XP_003210336.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Meleagris gallopavo]
Length = 453
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEE-----DEQTNI 57
F + + ++EFAAV+YFT + + + V ++E D N+
Sbjct: 299 FAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEIVSHSDSNCNL 358
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYR-KKREQEVSREGYQFHIN 116
K RV SV + DQ + E ++++N + + +
Sbjct: 359 KK-----RVNSVT---------SQADQ--SPEASIISNSASQCQPVSAPPPAPPAPPPVG 402
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 403 GTSKIDQYSRILFPVAFAGFNLVYWVVYLS 432
>gi|149035306|gb|EDL90010.1| gamma-aminobutyric acid A receptor, gamma 1, isoform CRA_b [Rattus
norvegicus]
Length = 336
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 299 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 334
>gi|395843741|ref|XP_003794632.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Otolemur garnettii]
Length = 465
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|395542833|ref|XP_003773329.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Sarcophilus harrisii]
Length = 486
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ SKID+ +RILFP +FG N+ YW+ Y++ KDP
Sbjct: 445 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS-------KDP 478
>gi|74200707|dbj|BAE24741.1| unnamed protein product [Mus musculus]
Length = 547
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 511 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 541
>gi|18034793|ref|NP_542153.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Rattus
norvegicus]
gi|120782|sp|P23574.1|GBRG1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|56176|emb|CAA40739.1| GABA(A) receptor gamma-1 subunit [Rattus norvegicus]
gi|149035305|gb|EDL90009.1| gamma-aminobutyric acid A receptor, gamma 1, isoform CRA_a [Rattus
norvegicus]
Length = 465
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|33468895|ref|NP_034381.1| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Mus
musculus]
gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|12851205|dbj|BAB28975.1| unnamed protein product [Mus musculus]
gi|26335917|dbj|BAC31659.1| unnamed protein product [Mus musculus]
gi|63101340|gb|AAH94603.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Mus
musculus]
gi|148705864|gb|EDL37811.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_b [Mus musculus]
Length = 552
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 511 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 541
>gi|313240835|emb|CBY33125.1| unnamed protein product [Oikopleura dioica]
Length = 428
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F YC A ++EFA+V+YFT L+ E+ + S+ TN V
Sbjct: 301 FTYCFAALIEFASVNYFTVIRPRA---LIQQLEVNGNDSDSGLDSDGNYQPSTN----GV 353
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK-I 121
R S ++S + + + + G F + I
Sbjct: 354 RRRFAS--------------SKMSNSDGGSASKSRPGSILSRIRGGSGSSFWTQLANNHI 399
Query: 122 DRVSRILFPASFGLLNLFYWISYIT 146
DRVSR++FP +F L N+ YW +Y++
Sbjct: 400 DRVSRVMFPLTFFLFNVVYWFAYLS 424
>gi|297292520|ref|XP_002804107.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Macaca mulatta]
Length = 388
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 351 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 386
>gi|281342940|gb|EFB18524.1| hypothetical protein PANDA_010715 [Ailuropoda melanoleuca]
Length = 430
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 393 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 428
>gi|156363414|ref|XP_001626039.1| predicted protein [Nematostella vectensis]
gi|156212900|gb|EDO33939.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 89 EVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
+V V +K ++ + ++ +IN ++K++ + RI FP +F +LN+FYW+ Y+T
Sbjct: 132 QVEAVLTKKGVAPTKKPLDKKNDNHYINLLTKVEYIFRIAFPLTFVILNVFYWVYYLTIA 191
Query: 149 E 149
E
Sbjct: 192 E 192
>gi|149052256|gb|EDM04073.1| gamma-aminobutyric acid A receptor, pi [Rattus norvegicus]
Length = 391
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 327 DNVNYSDLTMKASDKFKFVFREKIGRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 386
Query: 143 SYI 145
Y+
Sbjct: 387 YYM 389
>gi|26327955|dbj|BAC27718.1| unnamed protein product [Mus musculus]
Length = 465
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|354500347|ref|XP_003512262.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 2 [Cricetulus griseus]
Length = 466
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 429 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 464
>gi|31542878|ref|NP_034382.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Mus
musculus]
gi|408360110|sp|Q9R0Y8.2|GBRG1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|26329877|dbj|BAC28677.1| unnamed protein product [Mus musculus]
gi|26338950|dbj|BAC33146.1| unnamed protein product [Mus musculus]
gi|26340688|dbj|BAC34006.1| unnamed protein product [Mus musculus]
gi|71534085|gb|AAH99939.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1 [Mus
musculus]
gi|74197291|dbj|BAE43302.1| unnamed protein product [Mus musculus]
gi|148705859|gb|EDL37806.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1, isoform
CRA_b [Mus musculus]
Length = 465
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|338723636|ref|XP_003364764.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 3 [Equus caballus]
Length = 485
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 444 SGASKIDKYARILFPVTFGAFNMVYWVVYLS 474
>gi|5453385|gb|AAD43563.1|AF156490_1 gamma-aminobutyric acid A receptor gamma 1 subunit [Mus musculus]
Length = 119
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 82 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 117
>gi|410957692|ref|XP_003985459.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Felis
catus]
Length = 465
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|344279191|ref|XP_003411374.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Loxodonta africana]
Length = 465
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|354500345|ref|XP_003512261.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 1 [Cricetulus griseus]
Length = 464
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 427 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 462
>gi|359321100|ref|XP_003639504.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Canis lupus familiaris]
Length = 465
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|149702776|ref|XP_001496046.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Equus caballus]
Length = 555
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 514 SGASKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|13591945|ref|NP_112291.1| gamma-aminobutyric acid receptor subunit pi precursor [Rattus
norvegicus]
gi|3023821|sp|O09028.1|GBRP_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197003|gb|AAC53255.1| GABA-A receptor pi subunit [Rattus norvegicus]
Length = 440
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVNYSDLTMKASDKFKFVFREKIGRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
>gi|335293408|ref|XP_003356956.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 3 [Sus scrofa]
Length = 484
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 443 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 473
>gi|335293404|ref|XP_003356954.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Sus scrofa]
Length = 554
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|126331781|ref|XP_001372368.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Monodelphis domestica]
Length = 555
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ SKID+ +RILFP +FG N+ YW+ Y++ KDP
Sbjct: 514 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS-------KDP 547
>gi|395509796|ref|XP_003759176.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Sarcophilus harrisii]
Length = 441
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 313 ICFSFVFGALLEYAVAHY--------------SSSQKMAAKDRGTSKEVEEVNITNI--- 355
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D ++ ++ + ++K++ ++ R F I + S
Sbjct: 356 -INSSISSFKRKISFATIEISGDNVNYSDLTMKTSDKFKFIFRDKMGRIVDYFTIQNPSN 414
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L+N+FYW Y+
Sbjct: 415 VDRYSKLLFPLVFMLVNVFYWAYYL 439
>gi|291224455|ref|XP_002732219.1| PREDICTED: Gamma-aminobutyric acid receptor subunit alpha-6-like
[Saccoglossus kowalevskii]
Length = 456
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGS-GEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHK 59
+ F + + +++EFAA Y TK + DE+++ P S ++ + I++
Sbjct: 323 LCFTFVLGSLVEFAAATYLTKKHHLAQEKIKAKRDEMQIQMMPIS--GYRKKTKYGGIYR 380
Query: 60 IKVDYRVCSVYE--IRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
+YE C ++ L N KY+ SR F
Sbjct: 381 SAPRTTTEVIYEEPADEEGCCDAMIHCLK-------GNAKYK---NFSFSRNCNTF---D 427
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
SKIDR+ R FP SF LLN YWI+Y+
Sbjct: 428 TSKIDRICRRAFPMSFILLNFLYWIAYL 455
>gi|148705858|gb|EDL37805.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1, isoform
CRA_a [Mus musculus]
Length = 419
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 382 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 417
>gi|301772760|ref|XP_002921800.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ailuropoda melanoleuca]
Length = 465
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
>gi|395542831|ref|XP_003773328.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Sarcophilus harrisii]
Length = 537
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ SKID+ +RILFP +FG N+ YW+ Y++ KDP
Sbjct: 496 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS-------KDP 529
>gi|426344240|ref|XP_004038682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Gorilla gorilla gorilla]
Length = 491
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 450 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 480
>gi|395542829|ref|XP_003773327.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Sarcophilus harrisii]
Length = 556
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
+ SKID+ +RILFP +FG N+ YW+ Y++ KDP
Sbjct: 515 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS-------KDP 548
>gi|449273442|gb|EMC82936.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Columba livia]
Length = 554
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|338723634|ref|XP_003364763.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Equus caballus]
Length = 536
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 495 SGASKIDKYARILFPVTFGAFNMVYWVVYLS 525
>gi|335293406|ref|XP_003356955.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Sus scrofa]
Length = 535
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 494 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 524
>gi|326919232|ref|XP_003205886.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Meleagris gallopavo]
Length = 555
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 514 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|118090514|ref|XP_420724.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Gallus gallus]
Length = 554
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|432900936|ref|XP_004076732.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Oryzias latipes]
Length = 458
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK S EIR +S + + NI
Sbjct: 319 YAFVFSALIEFATVNYFTKR-SWAWDGKKEGMEIR---RRESATLAKKSNNTFNI----- 369
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
V + Y + K + +S A Y K + + + N VSK+D
Sbjct: 370 ---VGTTYAMNVAK--DQGLTTISKSAGGATAKHSYLHKMDDPYTEAKKSY--NRVSKVD 422
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP F + NL YW +Y+
Sbjct: 423 KISRIIFPVLFFIFNLGYWATYV 445
>gi|4336690|gb|AAD17896.1| gamma-aminobutyric-acid receptor rho-3 subunit precursor [Morone
americana]
Length = 470
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 2 SFFYCIATILEFAAVHYFT------KTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT 55
SF + +++E+AAV+YFT K S +IP +Y +
Sbjct: 341 SFLFVFLSVIEYAAVNYFTTVEEMKKLKSAKIP---------------NYNASQAMAFDG 385
Query: 56 NIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHI 115
H ++D + S E+ + PN + N A + + R + R+ F +
Sbjct: 386 CFHDNEID--LTSFPEVSS---TPNTERNTQSRNSNASAPTEGTRLRRKHPLRQNLSFIM 440
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ ID SR++FP ++ L N+ YW Y
Sbjct: 441 SNSYMIDSYSRVIFPLAYLLFNIIYWSMY 469
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 453 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 483
>gi|27806985|ref|NP_776968.1| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Bos
taurus]
gi|361|emb|CAA43696.1| GABA-A bovine alpha4 subunit [Bos taurus]
Length = 556
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 515 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 545
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 461 LTDVSTIDKWSRIIFPITFGFFNLVYWMYYV 491
>gi|94400793|ref|NP_542154.3| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Rattus
norvegicus]
gi|120763|sp|P28471.1|GBRA4_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|204210|gb|AAC42032.1| GABA-A receptor alpha-4 subunit [Rattus norvegicus]
gi|236012|gb|AAB19902.1| GABAA receptor alpha 4 subunit [Rattus sp.]
gi|149035301|gb|EDL90005.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Rattus
norvegicus]
Length = 552
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 514 SKIDKYARILFPVTFGAFNMVYWVVYLS 541
>gi|363733739|ref|XP_003641288.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Gallus gallus]
Length = 536
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 495 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 525
>gi|449500682|ref|XP_004174868.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Taeniopygia guttata]
Length = 554
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|359321074|ref|XP_539251.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Canis
lupus familiaris]
Length = 568
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 529 TSKIDKYARILFPVTFGAFNMVYWVVYLS 557
>gi|410957686|ref|XP_003985456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Felis catus]
Length = 484
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 446 SKIDKYARILFPVTFGAFNMVYWVVYLS 473
>gi|443703782|gb|ELU01184.1| hypothetical protein CAPTEDRAFT_216654 [Capitella teleta]
Length = 384
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 55/145 (37%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F++ A ++E+A V+YFTKTGS K ++ E +E
Sbjct: 292 MCFWFVFAALVEYAGVNYFTKTGS------------------KEFIEESDE--------- 324
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
I+ +++ N + R E + + VSK
Sbjct: 325 --------------------IIFNEFAAWISIACNIETFGARISETN--------DPVSK 356
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
ID +SRI+FP F LN+ YW +I
Sbjct: 357 IDSMSRIIFPFVFTCLNVLYWAGFI 381
>gi|410957682|ref|XP_003985454.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Felis catus]
Length = 554
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|351698146|gb|EHB01065.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Heterocephalus
glaber]
Length = 555
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 SKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|224068165|ref|XP_002193341.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Taeniopygia guttata]
Length = 465
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 20/149 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYV-SEDE----EDEQTNI 57
F + + ++EFAAV+YFT + + + V +EDE D +N+
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEIVSHSDSNSNL 370
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K RV S+ P+I+ ++ + I
Sbjct: 371 KK-----RVNSITSQAEQSPEPSIISNTASQ----------CQPLPVPPPAPPQPPPIGG 415
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 416 ASKIDQYSRILFPVAFAGFNLVYWVVYLS 444
>gi|143811394|sp|P20237.2|GBRA4_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|115305322|gb|AAI23425.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Bos taurus]
gi|440908384|gb|ELR58405.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Bos grunniens
mutus]
Length = 555
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 514 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|395843745|ref|XP_003794634.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Otolemur garnettii]
Length = 555
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 SKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|332218628|ref|XP_003258456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Nomascus leucogenys]
Length = 558
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 520 SKIDKYARILFPVTFGAFNMVYWVVYLS 547
>gi|297673418|ref|XP_002814765.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Pongo abelii]
Length = 554
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|296486583|tpg|DAA28696.1| TPA: gamma-aminobutyric acid receptor subunit alpha-4 [Bos taurus]
Length = 555
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 515 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 545
>gi|296196621|ref|XP_002745921.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Callithrix jacchus]
Length = 554
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|426350884|ref|XP_004042993.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Gorilla gorilla gorilla]
Length = 453
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +++ + N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VTSSKANKVLT-RAPILQSTPVTPPPLSPAFGD 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+N VS ID+ SR++FP +F NLFYW+ Y+
Sbjct: 449 LNDVSVIDKWSRLVFPVTFAFFNLFYWLYYV 479
>gi|344288343|ref|XP_003415910.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 3 [Loxodonta africana]
Length = 485
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 447 SKIDKYARILFPVTFGAFNMVYWVVYLS 474
>gi|905393|gb|AAB52519.1| GABAA receptor subunit alpha4 [Homo sapiens]
Length = 554
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|301763284|ref|XP_002917059.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Ailuropoda melanoleuca]
gi|281338654|gb|EFB14238.1| hypothetical protein PANDA_005231 [Ailuropoda melanoleuca]
Length = 555
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 TSKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|34452723|ref|NP_000800.2| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor [Homo sapiens]
gi|114594937|ref|XP_526774.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Pan troglodytes]
gi|206729865|sp|P48169.2|GBRA4_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|23272311|gb|AAH35055.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|119613435|gb|EAW93029.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|123981552|gb|ABM82605.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|123996377|gb|ABM85790.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|157928220|gb|ABW03406.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|193786905|dbj|BAG52228.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|344288339|ref|XP_003415908.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Loxodonta africana]
Length = 555
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 SKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|426231659|ref|XP_004009856.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Ovis aries]
Length = 555
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 SKIDKYARILFPVTFGAFNMVYWVVYLS 544
>gi|297284832|ref|XP_001087158.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Macaca
mulatta]
Length = 467
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S F+ +++E+AAV+Y T +G+I + + D ++ + Y + + +
Sbjct: 336 VSSFFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDRCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ N D + + + + R KR + + +
Sbjct: 396 QTSL--------------------SLNSEDFMRRKSIRSPSTDSTRIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPVVYILFNLFYWGVYV 467
>gi|403284710|ref|XP_003933701.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Saimiri boliviensis boliviensis]
Length = 553
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 515 SKIDKYARILFPVTFGAFNMVYWVVYLS 542
>gi|348575241|ref|XP_003473398.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
isoform 2 [Cavia porcellus]
Length = 443
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + S + ++ + +S+ E + I
Sbjct: 301 FAFVFSALIEFAAVNYFT-----NLQIQRSKRKTQIAATSPATISKATEPLEAEIVVHSD 355
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEVSREGYQFHIN 116
K + R+ S+ TL + + ++ T E NL + V+
Sbjct: 356 SKYHLKKRITSL----TLPIIKSPEASKVLTREPNL---------QSTPVTPPPLLPAFG 402
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 403 GTSKIDQYSRILFPVAFAGFNLVYWIVYLS 432
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 467 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 497
>gi|380796557|gb|AFE70154.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor, partial [Macaca mulatta]
Length = 541
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 503 SKIDKYARILFPVTFGAFNMVYWVVYLS 530
>gi|348575239|ref|XP_003473397.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
isoform 1 [Cavia porcellus]
Length = 453
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + S + ++ + +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTN-----LQIQRSKRKTQIAATSPATISKATEPLEAEIVVHSD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEVSREGYQFHIN 116
K + R+ S+ TL + + ++ T E NL + V+
Sbjct: 366 SKYHLKKRITSL----TLPIIKSPEASKVLTREPNL---------QSTPVTPPPLLPAFG 412
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 413 GTSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|324021688|ref|NP_001191195.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 2 [Homo
sapiens]
gi|332819944|ref|XP_003310456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan troglodytes]
Length = 535
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 496 TSKIDKYARILFPVTFGAFNMVYWVVYLS 524
>gi|426231663|ref|XP_004009858.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Ovis aries]
Length = 485
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 447 SKIDKYARILFPVTFGAFNMVYWVVYLS 474
>gi|426231661|ref|XP_004009857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Ovis aries]
Length = 536
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 498 SKIDKYARILFPVTFGAFNMVYWVVYLS 525
>gi|1836080|gb|AAB46866.1| gamma-aminobutyric acid A receptor alpha 4 subunit, GABAA receptor
alpha subunit [human, fetal brain, Peptide, 554 aa]
Length = 554
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|410957684|ref|XP_003985455.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Felis catus]
Length = 535
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 497 SKIDKYARILFPVTFGAFNMVYWVVYLS 524
>gi|402869290|ref|XP_003898696.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Papio
anubis]
Length = 554
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|332218638|ref|XP_003258461.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
6 [Nomascus leucogenys]
Length = 488
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 450 SKIDKYARILFPVTFGAFNMVYWVVYLS 477
>gi|441663565|ref|XP_004091687.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Nomascus leucogenys]
Length = 539
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 500 TSKIDKYARILFPVTFGAFNMVYWVVYLS 528
>gi|324021691|ref|NP_001191196.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 3 [Homo
sapiens]
gi|332819946|ref|XP_003310457.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Pan troglodytes]
Length = 484
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 446 SKIDKYARILFPVTFGAFNMVYWVVYLS 473
>gi|291410172|ref|XP_002721381.1| PREDICTED: gamma-aminobutyric acid (GABA) receptor, theta
[Oryctolagus cuniculus]
Length = 637
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
F+ V K+DR SR+LFP SFGL N+ YW+ +I
Sbjct: 604 FNPAYVPKVDRWSRLLFPLSFGLFNVVYWLYHI 636
>gi|109074156|ref|XP_001101231.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Macaca
mulatta]
gi|355687260|gb|EHH25844.1| GABA(A) receptor subunit alpha-4 [Macaca mulatta]
gi|355749254|gb|EHH53653.1| GABA(A) receptor subunit alpha-4 [Macaca fascicularis]
Length = 554
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 516 SKIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|343469067|gb|AEM43800.1| gamma-aminobutyric acid A receptor subunit gamma-2 [Xenopus laevis]
Length = 464
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI V+KID SRI FP +F L NL YW+SY+
Sbjct: 427 RHG-RLHIR-VAKIDSYSRIFFPTAFCLFNLVYWVSYL 462
>gi|344288341|ref|XP_003415909.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Loxodonta africana]
Length = 536
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 497 TSKIDKYARILFPVTFGAFNMVYWVVYLS 525
>gi|395817070|ref|XP_003781998.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Otolemur
garnettii]
Length = 440
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ ++ E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRATAKEVEEVNITNIINS 357
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ + ++++ N VD ++ + ++K++ +++ R F I + S
Sbjct: 358 SISSFKRKI-SFASIEISGNNVDY---SDLTMKTSDKFKFVFREKIGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|351696716|gb|EHA99634.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Heterocephalus
glaber]
Length = 453
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 24/150 (16%)
Query: 3 FFYCIATILEFAAVHYFT--KTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH-- 58
F + + ++EFAAV+YFT +T +++ + P S +E E E +H
Sbjct: 311 FAFVFSALIEFAAVNYFTSLQTRGARRKAQITA----ISPVTISKATEPVEAEIV-VHSD 365
Query: 59 -KIKVDYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEVSREGYQFHIN 116
K + R+ S+ L + P+ ++ T E N + ++
Sbjct: 366 SKYHLKKRITSL----RLPIIPSPEASKVLTKEPNF---------QSTPLTPPSLSTAFG 412
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 413 GTSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|348571820|ref|XP_003471693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Cavia porcellus]
Length = 536
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 495 SGTSKIDQYARILFPVTFGAFNMVYWVVYLS 525
>gi|431918111|gb|ELK17339.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Pteropus alecto]
Length = 411
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 27/156 (17%)
Query: 3 FFYCIATILEFAAVHYFTK------------TGSGEIPFLVSSDEIRVHPHPKSYVSEDE 50
F + + ++EFAAV+YFT S + +++ + Y+S
Sbjct: 260 FAFVFSALIEFAAVNYFTNLQTQKAKRKAKIAASSPVTISKANEPLEAEIVLAEYLSFAP 319
Query: 51 EDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREG 110
+ + H K R+ S+ TL + P+ D ++ + V
Sbjct: 320 QHSDSKYHLKK---RITSL----TLPIVPSPEDNKVLTRAPILPSTPVTPPPLSPV---- 368
Query: 111 YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 369 ----FGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 400
>gi|372266072|ref|NP_001243179.1| gamma-aminobutyric acid receptor subunit gamma-2 [Danio rerio]
Length = 476
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI V+KID +RI FP +FGL N+ YW SY+
Sbjct: 439 RHG-RLHIR-VAKIDSYARIFFPTAFGLFNVVYWFSYL 474
>gi|449267232|gb|EMC78198.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Columba livia]
Length = 465
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YW+ Y++
Sbjct: 413 IGGTSKIDQYSRILFPVAFAGFNLVYWVVYLS 444
>gi|432880405|ref|XP_004073681.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oryzias latipes]
Length = 570
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
+ SKID+ +RILFP SF N+ YW+ Y++ +
Sbjct: 514 MGGTSKIDKYARILFPVSFSAFNMVYWVVYLSKE 547
>gi|403287098|ref|XP_003934794.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Saimiri boliviensis boliviensis]
Length = 453
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + +
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQLASPPPVTISKATEPLEAEVVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + +
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSPEANKVLT-RTPILQSTPATPPPLLPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|403290182|ref|XP_003936209.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Saimiri
boliviensis boliviensis]
Length = 519
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D++ ++ + +K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 455 DKVDYSDLTMKTRDKFKFVVREKMGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 514
Query: 143 SYI 145
Y+
Sbjct: 515 YYM 517
>gi|348571822|ref|XP_003471694.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Cavia porcellus]
Length = 485
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 444 SGTSKIDQYARILFPVTFGAFNMVYWVVYLS 474
>gi|426350886|ref|XP_004042994.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Gorilla gorilla gorilla]
Length = 449
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + ++ P +S+ E + I
Sbjct: 307 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQIAAPPTVTISKATEPLEAEIVLHPD 361
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +++ + N V + + V+
Sbjct: 362 SKYHLKKRITSL----SLPI-------VTSSKANKVLT-RAPILQSTPVTPPPLSPAFGD 409
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 410 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 438
>gi|344243737|gb|EGV99840.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Cricetulus
griseus]
Length = 214
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ SRILFP +F NL YWI Y++
Sbjct: 172 VGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 203
>gi|432109366|gb|ELK33624.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Myotis davidii]
Length = 330
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI ++KID SRI FP +F L NL YW++Y+
Sbjct: 293 RKG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVAYL 328
>gi|46409071|dbj|BAD16657.1| glutamate-gated chloride channel subunit type A [Musca domestica]
Length = 458
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK--V 62
+ +LEFA V+Y +++GS + + H ++ + + EQ +I +
Sbjct: 317 FVFGALLEFALVNYASRSGSN-----------KANMHKENMKKKRRDLEQASIDAASDLL 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK-- 120
D + + ++ L P D L+ +++ KR +F S+
Sbjct: 366 DTDSNATFAMKPLVRHPG--DPLALEKLRQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSK 423
Query: 121 -IDRVSRILFPASFGLLNLFYWISYITDQE 149
ID +SRI FP F L NL YW +Y+ +E
Sbjct: 424 RIDVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|395817720|ref|XP_003782304.1| PREDICTED: glycine receptor subunit alpha-1 [Otolemur garnettii]
Length = 590
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 544 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 579
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+N VS +D+ SR++FP +F NLFYW+ Y+
Sbjct: 427 LNDVSVVDKWSRLVFPVTFAFFNLFYWLYYV 457
>gi|348518924|ref|XP_003446981.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oreochromis niloticus]
Length = 472
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++KID +RI FP +F L NL YW+SY+
Sbjct: 435 RHG-RLHIR-IAKIDSYARIFFPTAFALFNLVYWVSYL 470
>gi|351701164|gb|EHB04083.1| Gamma-aminobutyric acid receptor subunit pi [Heterocephalus glaber]
Length = 440
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY + + + D +V +E E+ NI I
Sbjct: 312 ICFSFVFGALLEYAVAHY------SSLQQMAAKDRGKV-----------KEAEEVNIANI 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFATIEISGDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWSYYM 438
>gi|47219236|emb|CAG11698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++KID +RI FP +F L NL YW+SY+
Sbjct: 424 RHG-RLHIR-IAKIDSYARIFFPTAFALFNLVYWVSYL 459
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 599 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 629
>gi|432895803|ref|XP_004076169.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oryzias latipes]
Length = 475
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++KID +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RLHIR-IAKIDSYARIFFPTAFALFNLVYWVSYL 473
>gi|332225167|ref|XP_003261751.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Nomascus
leucogenys]
Length = 467
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSETDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R KR + + +
Sbjct: 396 QTSLSLNSEDF-------MRRKSICSP-----STDSS--------RIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 467
>gi|432849823|ref|XP_004066630.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 484
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP+ F L NL YW+ Y+
Sbjct: 454 LTDVNAIDRWSRIIFPSVFSLFNLIYWLYYV 484
>gi|410915006|ref|XP_003970978.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Takifugu rubripes]
Length = 472
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++KID +RI FP +F L NL YW+SY+
Sbjct: 435 RHG-RLHIR-IAKIDSYARIFFPTAFALFNLVYWVSYL 470
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 423 NLTDVSTIDKWSRIIFPITFGFFNLIYWLYYV 454
>gi|37623908|gb|AAQ95599.1| GABA-A alpha 4 subunit [Macaca fascicularis]
Length = 74
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 47 SKIDKYARILFPVTFGAFNMVYWVVYLS 74
>gi|1470364|gb|AAB36480.1| gamma-aminobutyric acid type A receptor alpha 6 subunit [Homo
sapiens]
Length = 453
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNI----- 57
F + + ++EFAAV+YFT + + + + + P +S+ E + I
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQTQK-----AKRKAQFAAPPTVTISKATEPLEAEIVLHPD 365
Query: 58 HKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINS 117
K + R+ S+ +L + +S+ E N V + + V+
Sbjct: 366 SKYHLKKRITSL----SLPI-------VSSSEANKVLT-RAPILQSTPVTPPPLPPAFGG 413
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 414 TSKIDQYSRILFPVAFAGFNLVYWVVYLS 442
>gi|351701085|gb|EHB04004.1| Gamma-aminobutyric acid receptor subunit beta-3 [Heterocephalus
glaber]
Length = 501
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 470 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 500
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 95 NEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
N +K R Q R Q I V+ IDR SRI+FP++F L NL YW+ Y+
Sbjct: 422 NAHLKKTRLQ---RRSSQLKIKIPDLTDVNAIDRWSRIIFPSAFSLFNLIYWLYYV 474
>gi|301624789|ref|XP_002941681.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2
[Xenopus (Silurana) tropicalis]
Length = 505
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI V+KID SRI FP +F L NL YW+SY+
Sbjct: 468 RHG-RIHIR-VAKIDSYSRIFFPTAFCLFNLVYWVSYL 503
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 524 EMRKLFIQRAKKIDKISRIGFPMAFLIFNIFYWIIY 559
>gi|301628162|ref|XP_002943228.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Xenopus (Silurana) tropicalis]
Length = 455
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDE----EDEQTNIH 58
F + + ++EFAAV+YFT +I + + + +E+E D N+
Sbjct: 311 FAFVFSALIEFAAVNYFTNL---QIQKTMMKAAKKAALAAATARAENEFVTLSDSNCNLK 367
Query: 59 KIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKK-----REQEVSREGYQF 113
K R+ SV + +Q + ++ L + Y ++ R+ +S
Sbjct: 368 K-----RINSV---------ASQGNQSTEGDLPLYEDSPYNEQTDIPTRDHMLSDTTSSQ 413
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
H + SKID+ +RILFP SF NL YW+ Y++
Sbjct: 414 HTGT-SKIDKYARILFPLSFAGFNLVYWVVYLS 445
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FPA F L NL YW+ Y+
Sbjct: 450 LTDVNAIDRWSRIIFPAVFSLFNLIYWLYYV 480
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FPA F L NL YW+ Y+
Sbjct: 440 LTDVNAIDRWSRIIFPAVFSLFNLIYWLYYV 470
>gi|383854931|ref|XP_003702973.1| PREDICTED: glutamate-gated chloride channel-like isoform 2
[Megachile rotundata]
Length = 452
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD + P SE E+ + +++
Sbjct: 319 FVFGALLEFALVNYASRSD-------MHSDNMEKKYPP----SETEQSSSIDPSSDQIEP 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 368 DNSSNFAMKPLVRQPE--DTMSVDRMQHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 423
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F + NL YW +Y+ +E
Sbjct: 424 SRIFFPIVFAIFNLAYWSTYLFRKE 448
>gi|297670546|ref|XP_002813426.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pongo
abelii]
Length = 467
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD + K RK VSR
Sbjct: 396 QTSLSLNSEDF-------MRRKSICSP-----STDSSQI----KRRKSLGGHVSR----I 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 467
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHINS-----VSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q +N+ V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 462 ALERHATQKKSRLRRRASQLKVNTPDLSDVNSIDKWSRMIFPTLFSFFNIVYWLYYV 518
>gi|383854929|ref|XP_003702972.1| PREDICTED: glutamate-gated chloride channel-like isoform 1
[Megachile rotundata]
Length = 452
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD + P SE E+ + +++
Sbjct: 319 FVFGALLEFALVNYASRSD-------MHSDNMEKKYPP----SETEQSSSIDPSSDQIEP 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
S + ++ L P D +S D + E + + R++ R +ID +
Sbjct: 368 DNSSNFAMKPLVRQPE--DTMSVDRMQHC--ELHMQPRKKNCCRSWLSKFPTRSKRIDVI 423
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F + NL YW +Y+ +E
Sbjct: 424 SRIFFPIVFAIFNLAYWSTYLFRKE 448
>gi|339241167|ref|XP_003376509.1| glycine receptor subunit beta-type 4 [Trichinella spiralis]
gi|316974773|gb|EFV58246.1| glycine receptor subunit beta-type 4 [Trichinella spiralis]
Length = 494
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 41/183 (22%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSG-EIPFLVSSDEIRVHPH-----------PKSYVSE 48
M+F +C ++LE A V Y ++ +G + P ++ H H PK+Y +
Sbjct: 316 MTFVFC--SLLELAWVGYLSRKANGFKRPPTPAARNQSSHKHKRKKTVMLKNEPKNYGTM 373
Query: 49 DEEDEQTNIHKI-----------------------KVDYRVCSVYEIRTLKVCPNIVDQL 85
+ + E N H I +YR + + + P L
Sbjct: 374 NFDME--NFHSIHHLNRNNSHTNVTTAFPFFDSDDPYEYRPPGLQRQMNVNLFPKSYSYL 431
Query: 86 STDEVNLVANEKYRKKREQEVSREGYQFH-INSVS-KIDRVSRILFPASFGLLNLFYWIS 143
+ L + Y K +E ++ QF+ +S++ KID +S +FP F L N+FYW
Sbjct: 432 CKCQQRLNQSNSYNKLKETTANQTENQFYDYDSLALKIDHISCFVFPTLFVLFNIFYWCY 491
Query: 144 YIT 146
Y+T
Sbjct: 492 YLT 494
>gi|443716699|gb|ELU08090.1| hypothetical protein CAPTEDRAFT_89972, partial [Capitella teleta]
Length = 313
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGE 26
M F + +ATIL+FA VH+FTK GSGE
Sbjct: 263 MCFAFILATILQFAMVHFFTKVGSGE 288
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+++ VS ID+ SR++FP +FG NL YW+ Y+
Sbjct: 416 NLSDVSTIDKWSRVIFPITFGFFNLIYWLYYV 447
>gi|260796363|ref|XP_002593174.1| hypothetical protein BRAFLDRAFT_72747 [Branchiostoma floridae]
gi|229278398|gb|EEN49185.1| hypothetical protein BRAFLDRAFT_72747 [Branchiostoma floridae]
Length = 396
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 93 VANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
VA E++ K +V H+N SK+D VSRILFP F + N+ +W Y+
Sbjct: 347 VAQERHDKMAADDV----ISIHVNLASKMDVVSRILFPTLFLVFNIAFWCKYV 395
>gi|345320826|ref|XP_001521787.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ornithorhynchus anatinus]
Length = 513
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + H+ V++ID +RI FP +F L NL YWI Y+
Sbjct: 476 REG-RLHLR-VTQIDSYARIFFPTAFVLFNLVYWIGYL 511
>gi|2736068|gb|AAB94045.1| gamma-aminobutyric acid receptor beta subunit [Takifugu rubripes]
Length = 453
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+++ VS ID+ SR++FP +FG NL YW+ Y+
Sbjct: 421 NLSDVSTIDKWSRVIFPITFGFFNLIYWLYYV 452
>gi|291387808|ref|XP_002710421.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, pi
[Oryctolagus cuniculus]
Length = 440
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D ++ ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISGDNVNYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLVFMLANVFYWAYYM 438
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+++ VS ID+ SR++FP +FG NL YW+ Y+
Sbjct: 450 NLSDVSTIDKWSRVIFPITFGFFNLIYWLYYV 481
>gi|241680536|ref|XP_002411566.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
gi|215504301|gb|EEC13795.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
Length = 405
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 30/174 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F + A +LE+AAV+Y T G+ + + +V P PKS +E +H +
Sbjct: 232 MCFVFVFAALLEYAAVNY-TYWGARAKKKTKKTKDTKVPPPPKSEPLYPNNEEIIELHDV 290
Query: 61 KVDYRVCSVYEIRTL---------KVCPN--IVDQLSTDEVNLVANEKYRKKRE------ 103
++ C R + K P+ + + + +L + YR +
Sbjct: 291 RLSPIPCLRNRHRPMSNPGSDNEIKFPPSFRMTGRFPYNPRSLPSGACYRGRAARTGDYG 350
Query: 104 -------QEVSREGYQFH-----INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
Q + R I V+KID+ SR++FP S+ + N YW Y+
Sbjct: 351 QRRPKVFQTLKRGASAIRASMPRIKDVNKIDKYSRVIFPISYLIFNAIYWCFYL 404
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 77 VCPNIVDQLSTDEVN--LVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFG 134
C D LS N AN + E R + I KID++SRI FP +F
Sbjct: 390 ACLQAKDGLSVKGANNNSTANPAPAPSKSPEEMR---KLFIQRAKKIDKISRIGFPMAFL 446
Query: 135 LLNLFYWISY 144
+ N+FYWI Y
Sbjct: 447 IFNMFYWIIY 456
>gi|149412486|ref|XP_001508755.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi
[Ornithorhynchus anatinus]
Length = 441
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 84 QLSTDEVN-----LVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNL 138
+LS D VN + ++K++ ++ R F I + S +DR S++LFP F L+N+
Sbjct: 373 ELSNDNVNYSDLTMKTSDKFKFVFRDKMGRIVDYFTIQNPSNVDRYSKLLFPLIFMLVNV 432
Query: 139 FYWISYI 145
FYW Y+
Sbjct: 433 FYWAYYM 439
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQ-------- 54
+ + +LE+AAV++ ++ + +R H KS E E +E
Sbjct: 364 LLFVFSALLEYAAVNFVSRQ---------HKELLRFRRHHKSKSKEGEVNESRLTPAATV 414
Query: 55 TNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFH 114
T+ D++V I TL P + + K +E+ +
Sbjct: 415 TSTPSNSKDFKVSGNNAIATLNT-PGGSANAAQNAPGGGGAAGGGGKSTEEMRK----LF 469
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
I+ KID VSR FP +F N+FYW+ Y
Sbjct: 470 IDRAKKIDTVSRAGFPLAFLFFNIFYWVLY 499
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+++ VS ID+ SR++FP +FG NL YW+ Y+
Sbjct: 419 NLSDVSTIDKWSRVIFPITFGFFNLIYWLYYV 450
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 584 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 623
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 566 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 596
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 457 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 487
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 486 EMRKLFIQRAKKIDKMSRIGFPMAFLIFNIFYWIIY 521
>gi|449266634|gb|EMC77674.1| Gamma-aminobutyric acid receptor subunit beta-4 [Columba livia]
Length = 410
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 379 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 409
>gi|431893826|gb|ELK03643.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Pteropus alecto]
Length = 490
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ +RILFP +FG N+ YW+ Y++
Sbjct: 453 KIDKYARILFPVTFGAFNMVYWVVYLS 479
>gi|291385736|ref|XP_002709462.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 554
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 KIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|449499157|ref|XP_002186823.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Taeniopygia guttata]
Length = 400
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 369 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 399
>gi|402873378|ref|XP_003900554.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Papio
anubis]
Length = 440
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVSITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYL 438
>gi|432926471|ref|XP_004080845.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oryzias latipes]
Length = 470
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 25/149 (16%)
Query: 2 SFFYCIATILEFAAVHYFT------KTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT 55
SF + +++E+AAV+Y T K G+IP + + D + E T
Sbjct: 340 SFLFVFLSVIEYAAVNYCTTLEEMRKMRRGKIPSTFDASQAMAFDG----CFHDNDIELT 395
Query: 56 NIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHI 115
++ TL P S+D + A E R +R++ V RE +
Sbjct: 396 TFTRMA-----------PTLTSNPLTTPTQSSD---IRAPEGTRLRRQRSV-RENVDLLV 440
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISY 144
N+ ID SR+ FP S+ L N YW Y
Sbjct: 441 NNSYMIDSYSRLAFPLSYLLFNTIYWSLY 469
>gi|149412517|ref|XP_001505750.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Ornithorhynchus anatinus]
Length = 451
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + + ++EFAAV+YFT + D ED++ +H
Sbjct: 311 FAFVFSALIEFAAVNYFTNL---HAQRAKRKAAKAAALAEALSAAMDPEDKRIILHS-DS 366
Query: 63 DYRVCSVYEIRTLKVCPNI-VDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+Y + T P++ + +ST +V N + G SKI
Sbjct: 367 NYNLKKRINSLTSHKVPSLDISMVST----IVPNSQSASTTPPSPGTNG------GTSKI 416
Query: 122 DRVSRILFPASFGLLNLFYWISYIT 146
D SRILFP +F NL YWI Y++
Sbjct: 417 DEYSRILFPVAFSGFNLVYWIVYLS 441
>gi|344265224|ref|XP_003404685.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Loxodonta africana]
Length = 516
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ YI
Sbjct: 459 ALERHVAQKKSHLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYI 515
>gi|397490151|ref|XP_003816071.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan paniscus]
Length = 554
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ +RILFP +FG N+ YW+ Y++
Sbjct: 517 KIDKYARILFPVTFGAFNMVYWVVYLS 543
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID+VSRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKVSRIGFPMAFLIFNMFYWIIY 438
>gi|195176505|ref|XP_002028780.1| GL18077 [Drosophila persimilis]
gi|194114675|gb|EDW36718.1| GL18077 [Drosophila persimilis]
Length = 414
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 13/63 (20%)
Query: 96 EKYRKKREQEVSREGYQ-----FHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQEN 150
+K+RK+RE++ + E + ++NSVS IDR +RI FP SF L +I D +N
Sbjct: 354 DKFRKQRERDAAAEKTEQSHNVSYVNSVSLIDRFARIAFPMSFVL--------FIPDTQN 405
Query: 151 FVW 153
W
Sbjct: 406 EYW 408
>gi|55620730|ref|XP_526252.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pan
troglodytes]
gi|397502590|ref|XP_003821935.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pan
paniscus]
Length = 467
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R KR + + +
Sbjct: 396 QTSLSLNSEDF-------MRRKSICSP-----STDSS--------RIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 467
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID+VSRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKVSRIGFPMAFLIFNMFYWIIY 446
>gi|410989597|ref|XP_004001045.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Felis
catus]
Length = 630
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
FH + V K+DR SRILFP +F + N+ YW+ +I
Sbjct: 597 FHPDYVPKVDRWSRILFPLAFVVFNIVYWVYHI 629
>gi|397490153|ref|XP_003816072.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Pan paniscus]
Length = 535
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ +RILFP +FG N+ YW+ Y++
Sbjct: 498 KIDKYARILFPVTFGAFNMVYWVVYLS 524
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID+VSRI FP +F + N+FYWI Y
Sbjct: 418 EMRKLFIQRAKKIDKVSRIGFPMAFLIFNMFYWIIY 453
>gi|109079726|ref|XP_001093483.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 3
[Macaca mulatta]
gi|355691837|gb|EHH27022.1| hypothetical protein EGK_17122 [Macaca mulatta]
gi|355750415|gb|EHH54753.1| hypothetical protein EGM_15649 [Macaca fascicularis]
Length = 440
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVSITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|41152262|ref|NP_957025.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6a precursor
[Danio rerio]
gi|37589683|gb|AAH59508.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6a [Danio rerio]
Length = 395
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
Query: 99 RKKREQEVSR----------EGYQFHIN----SVSKIDRVSRILFPASFGLLNLFYWISY 144
RK+R VS +G F N S ID+ SRILFP +FG+ NL YW Y
Sbjct: 323 RKRRGYSVSEAPRTRVPIFLQGSAFPPNMMLAGTSAIDKYSRILFPLAFGIFNLVYWYIY 382
Query: 145 IT 146
++
Sbjct: 383 LS 384
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q +N V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 462 ALERHATQKKSRLRRRASQLKVNIPDLSDVNSIDKWSRMIFPTLFSFFNIVYWLYYV 518
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q +N V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 462 ALERHATQKKSRLRRRASQLKVNIPDLSDVNSIDKWSRMIFPTLFSFFNIVYWLYYV 518
>gi|426341341|ref|XP_004035998.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Gorilla
gorilla gorilla]
Length = 467
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R KR + + +
Sbjct: 396 QTSLSLNSEDF-------MRRKSICSP-----STDSS--------RIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 467
>gi|397490155|ref|XP_003816073.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Pan paniscus]
Length = 484
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ +RILFP +FG N+ YW+ Y++
Sbjct: 447 KIDKYARILFPVTFGAFNMVYWVVYLS 473
>gi|156717244|ref|NP_001096164.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 precursor
[Xenopus (Silurana) tropicalis]
gi|134025815|gb|AAI36050.1| gabrb3 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ YI
Sbjct: 444 LTDVNAIDRWSRIVFPITFSLFNLIYWLYYI 474
>gi|157743288|ref|NP_001099050.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Homo
sapiens]
gi|187471177|sp|A8MPY1.2|GBRR3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3;
AltName: Full=GABA(A) receptor subunit rho-3; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 467
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R KR + + +
Sbjct: 396 QTSLSLNSEDF-------MRRKSICSP-----STDSS--------RIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 467
>gi|109132628|ref|XP_001093973.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Macaca
mulatta]
gi|355705252|gb|EHH31177.1| hypothetical protein EGK_21056 [Macaca mulatta]
gi|355757791|gb|EHH61316.1| hypothetical protein EGM_19303 [Macaca fascicularis]
Length = 632
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|402858824|ref|XP_003893885.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Papio
anubis]
Length = 467
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S F+ +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 336 VSSFFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDVVQAMAFDGCYHDSEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ N D + + + + R KR + + +
Sbjct: 396 QTSL--------------------SLNSEDFMRRKSIRSPSTDSTRIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPVVYLLFNLFYWGVYV 467
>gi|395509128|ref|XP_003758857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Sarcophilus harrisii]
Length = 459
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 418 GGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 448
>gi|380795453|gb|AFE69602.1| gamma-aminobutyric acid receptor subunit theta precursor, partial
[Macaca mulatta]
Length = 631
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 591 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 630
>gi|3559846|emb|CAA05260.1| DrosGluCl [Drosophila melanogaster]
Length = 454
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK--V 62
+ +LEFA V+Y +++GS + + H +S + + EQ ++ +
Sbjct: 317 FVFGALLEFALVNYASRSGSN-----------KANMHKESMKKKRRDLEQASLDAASDLL 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
D + + ++ L P D L+ ++ KR +F S +ID
Sbjct: 366 DTDSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRS-KRID 422
Query: 123 RVSRILFPASFGLLNLFYWISYITDQE 149
+SRI FP F L NL YW +Y+ +E
Sbjct: 423 VISRITFPLVFALFNLVYWSTYLFREE 449
>gi|5764187|gb|AAD51172.1|AF144648_1 GABA-A receptor theta [Homo sapiens]
Length = 627
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 587 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 626
>gi|7861736|gb|AAF70380.1|AF189259_1 GABA-A receptor theta subunit [Homo sapiens]
gi|80476592|gb|AAI09212.1| Gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
gi|80479041|gb|AAI09211.1| Gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
Length = 632
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|402911768|ref|XP_003918478.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Papio
anubis]
Length = 632
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|268838843|ref|NP_061028.2| gamma-aminobutyric acid receptor subunit theta precursor [Homo
sapiens]
gi|13959382|sp|Q9UN88.2|GBRT_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit theta;
AltName: Full=GABA(A) receptor subunit theta; Flags:
Precursor
gi|119619830|gb|EAW99424.1| gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
Length = 632
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 454 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 510
>gi|344265669|ref|XP_003404905.1| PREDICTED: glycine receptor subunit alpha-1 [Loxodonta africana]
Length = 457
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|441675485|ref|XP_003271905.2| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Nomascus
leucogenys]
Length = 632
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|344299196|ref|XP_003421273.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta
[Loxodonta africana]
Length = 625
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
F + V K+DR SR+LFP +FGL N+ YW +I
Sbjct: 592 FSPDYVPKVDRWSRVLFPLAFGLFNIAYWAYHI 624
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 397 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 432
>gi|227977097|gb|ACJ65067.1| Lgc-53 [Haemonchus contortus]
Length = 523
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 85 LSTDEVNLV----ANEKYRKKREQEVSREGY-----QFHINSVSKIDRVSRILFPASFGL 135
L+T V L+ N ++KR +E +R+ Y H+N +ID +S LFP F
Sbjct: 448 LTTGGVPLLVAPEGNGNTQRKRSEEKTRQMYVHVEHPIHVNG-ERIDEISAKLFPLMFTA 506
Query: 136 LNLFYWISYI 145
N+FYW YI
Sbjct: 507 FNIFYWFYYI 516
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 414 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 449
>gi|332861892|ref|XP_001136669.2| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Pan
troglodytes]
Length = 632
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|313230256|emb|CBY07960.1| unnamed protein product [Oikopleura dioica]
Length = 3051
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 37/164 (22%)
Query: 1 MSF--FYCIATILEFAAVHYFTKTGSGEIPFLVSSD-EIRVHPHPKSYVSED---EEDEQ 54
MSF + A +LE+AAV++ ++ +G + L E R P Y S +D
Sbjct: 2136 MSFCMLFVFAALLEYAAVNFISRQKAGILEILQKKRIERRTLPATGGYGSSFIGFGQDMP 2195
Query: 55 TNIHKIKV----DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREG 110
+I + ++ +Y S+ + T PN E+E++ G
Sbjct: 2196 QSISQSQLLPLSNYASLSIPKNPT----PN----------------------EKELAL-G 2228
Query: 111 YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWK 154
F+ +D VSRILFP+SF L + YW+ Y+ Q+ + K
Sbjct: 2229 ATFYKEFARSVDNVSRILFPSSFLLFSFIYWVYYLYSQDRSMLK 2272
>gi|297711334|ref|XP_002832300.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta, partial
[Pongo abelii]
Length = 571
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 531 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 570
>gi|62913|emb|CAA39968.1| GABA-A receptor, beta-4 subunit [Gallus gallus]
Length = 125
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ VS ID+ SRI+FP +FG NL YW+ Y+
Sbjct: 94 LTDVSTIDKWSRIIFPITFGFFNLVYWLYYV 124
>gi|397465571|ref|XP_003804564.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Pan
paniscus]
Length = 632
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 434 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 490
>gi|194044856|ref|XP_001927219.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Sus
scrofa]
Length = 644
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYW 141
FH + V KIDR SRILFP +F + N+ YW
Sbjct: 611 FHPDYVPKIDRCSRILFPLAFVMFNVVYW 639
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 471 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 527
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 423 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 458
>gi|296236669|ref|XP_002763428.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta
[Callithrix jacchus]
Length = 627
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 587 EGFSFDLFNPDYVPKVDKWSRFLFPLAFGLFNIVYWVYHM 626
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|410915502|ref|XP_003971226.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Takifugu rubripes]
Length = 458
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + D + + SE+ + N I
Sbjct: 318 YAFVFSALIEFATVNYFTKRS-------WAWDGKKEGMEIRRRESENLTKKTNNTFNI-- 368
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
V + Y I K + + A + Y K + + + N VS +D
Sbjct: 369 ---VGTTYAINVAK-DQGLTTISKSATTGAPAKQHYLHKMDDPYTEAKKSY--NRVSIVD 422
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP F + NL YW +YI
Sbjct: 423 KISRIIFPVLFFIFNLGYWATYI 445
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 397 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 432
>gi|426229950|ref|XP_004009046.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Ovis aries]
Length = 366
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 320 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 355
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 434 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 490
>gi|410039916|ref|XP_003950710.1| PREDICTED: glycine receptor subunit alpha-1 [Pan troglodytes]
gi|426350698|ref|XP_004042906.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Gorilla
gorilla gorilla]
gi|109732079|gb|AAI14968.1| GLRA1 protein [Homo sapiens]
Length = 366
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 320 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 355
>gi|341879605|gb|EGT35540.1| hypothetical protein CAEBREN_16538 [Caenorhabditis brenneri]
Length = 69
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWK 154
+ IDRV+ +LFP +F L NL YW Y+T N V+
Sbjct: 34 ASIDRVASMLFPTTFALFNLVYWSYYLTTSMNPVYS 69
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 381 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 416
>gi|260793485|ref|XP_002591742.1| hypothetical protein BRAFLDRAFT_83514 [Branchiostoma floridae]
gi|229276952|gb|EEN47753.1| hypothetical protein BRAFLDRAFT_83514 [Branchiostoma floridae]
Length = 517
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 96 EKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EK R R +E++R KIDR SRI FP +F + NL++W+ Y+
Sbjct: 477 EKDRLPRSEEMTR-----------KIDRASRIAFPCAFLVFNLWFWLFYL 515
>gi|119600277|gb|EAW79871.1| hCG2040586 [Homo sapiens]
Length = 365
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 234 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 293
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R KR + + +
Sbjct: 294 QTSLSLNSEDF-------MRRKSICSP-----STDSS--------RIKRRKSLGGHVGRI 333
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 334 ILENNHVIDTYSRILFPIVYILFNLFYWGVYV 365
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 381 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 416
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 389 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 424
>gi|444515642|gb|ELV10946.1| Gamma-aminobutyric acid receptor subunit theta [Tupaia chinensis]
Length = 699
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + V +DR SR LFP +FGL N+ YW +I
Sbjct: 659 EGFSFKVFTPDYVPTVDRWSRFLFPLAFGLFNIIYWAYHI 698
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 402 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 437
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
VS ID+ SR +FP +FG NL YW+ Y+
Sbjct: 476 VSTIDKWSRFIFPITFGFFNLVYWLYYV 503
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 434 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 490
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 384 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 419
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 410 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 445
>gi|410949423|ref|XP_003981421.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Felis catus]
Length = 366
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 320 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 355
>gi|332254999|ref|XP_003276623.1| PREDICTED: glycine receptor subunit alpha-1 [Nomascus leucogenys]
Length = 364
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 318 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 353
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 91 NLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
N AN R E R + I KID++SRI FP +F + N+FYWI Y
Sbjct: 391 NNTANPVPAPSRSPEEMR---KLFIQRAKKIDKISRIGFPMAFLIFNIFYWIIY 441
>gi|432849821|ref|XP_004066629.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Oryzias latipes]
Length = 450
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + H+N +S++D SR+ FP SF L N+ YW+SY+
Sbjct: 413 RRG-RIHVN-ISELDSYSRVFFPTSFLLFNIVYWVSYL 448
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|354497422|ref|XP_003510819.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3-like
[Cricetulus griseus]
Length = 455
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL Y +Y+
Sbjct: 413 NSVSKVDKISRIIFPVLFAIFNLVYCYTYV 442
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 373 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 408
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|149052672|gb|EDM04489.1| glycine receptor, alpha 1 subunit, isoform CRA_c [Rattus
norvegicus]
Length = 366
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 320 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 355
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|344248075|gb|EGW04179.1| Gamma-aminobutyric acid receptor subunit alpha-3 [Cricetulus
griseus]
Length = 286
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSK+D++SRI+FP F + NL Y +Y+
Sbjct: 244 NSVSKVDKISRIIFPVLFAIFNLVYCYTYV 273
>gi|311273995|ref|XP_003134138.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Sus
scrofa]
Length = 453
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWIVYLS 442
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|410949391|ref|XP_003981406.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Felis
catus]
Length = 487
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 430 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 486
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 77 VCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLL 136
C D +S N N + E R + I KID++SRI FP +F +
Sbjct: 402 ACLQAKDGISVKGSNNTTNPAPPPSKTPEEMR---KLFIQRAKKIDKMSRIGFPMAFLIF 458
Query: 137 NLFYWISY 144
N+FYWI Y
Sbjct: 459 NIFYWIIY 466
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|292495011|sp|P63137.2|GBRB2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|262527825|gb|ACY69098.1| gamma-aminobutyric acid A receptor beta 2 long isoform [Mus
musculus]
Length = 512
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|268556950|ref|XP_002636464.1| Hypothetical protein CBG23132 [Caenorhabditis briggsae]
Length = 458
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 76 KVCPN--IVDQLSTDEVNLVANEK-YRKKREQEVSREG----YQFHIN----SVSKIDRV 124
K CP+ ++D L EK + E+ +R G +QF + S KIDRV
Sbjct: 361 KKCPHKKLIDNFEASPAGLCRYEKRFMLPVERRSARWGGIMRFQFLQDFWNWSPEKIDRV 420
Query: 125 SRILFPASFGLLNLFYWISY 144
S ILFPA F + N+ YW Y
Sbjct: 421 SAILFPACFAIFNIVYWSYY 440
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|292620898|ref|XP_002664479.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Danio
rerio]
Length = 471
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 103 EQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+Q R + + IDR +RILFP +F L+N+FYW+ Y+
Sbjct: 427 KQMSRRAASMMSVENPHNIDRHARILFPMAFLLINIFYWLYYL 469
>gi|291387759|ref|XP_002710399.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|269914159|ref|NP_001161733.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Monodelphis domestica]
gi|395505008|ref|XP_003756838.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Sarcophilus harrisii]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 376 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 411
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 427 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 483
>gi|345799422|ref|XP_003434557.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Canis
lupus familiaris]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|350594447|ref|XP_003483903.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Sus
scrofa]
Length = 512
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 367 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 402
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|432856050|ref|XP_004068345.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 496
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 90 VNLVANEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISY 144
++L N +K R Q R Q I V+ IDR SRI+FP+ F L NL YW+ Y
Sbjct: 438 LSLDRNAHLKKTRLQ---RRSSQLKIKIPDLTDVNGIDRWSRIIFPSVFSLFNLIYWLYY 494
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 402 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 437
>gi|296192665|ref|XP_002744170.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Callithrix jacchus]
Length = 512
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 435 EMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 470
>gi|426257416|ref|XP_004022323.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Ovis
aries]
Length = 642
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
FH + + K+DR SR+LFP +F + N+ YW+ +I
Sbjct: 609 FHPDYIPKVDRCSRLLFPLAFVVFNIVYWVYHI 641
>gi|348575237|ref|XP_003473396.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Cavia porcellus]
Length = 512
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|308459567|ref|XP_003092101.1| CRE-LGC-49 protein [Caenorhabditis remanei]
gi|308254343|gb|EFO98295.1| CRE-LGC-49 protein [Caenorhabditis remanei]
Length = 462
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 76 KVCPN--IVDQLSTDEVNLVANEK-YRKKREQEVSREG--------YQFHINSVSKIDRV 124
K CP+ ++D L EK + E+ +R G + F S KIDRV
Sbjct: 362 KKCPHKKLIDNFEASPAGLCRYEKRFMLPVERRSARWGGFVRFQVFHDFWNWSPEKIDRV 421
Query: 125 SRILFPASFGLLNLFYWISY 144
S ILFPA F + N+ YW Y
Sbjct: 422 SAILFPACFAIFNIVYWSYY 441
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E +R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 407 REGETTRKLY---VDQAKRIDTISRAVFPFTFLIFNIFYWVVY 446
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 455 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 511
>gi|410906073|ref|XP_003966516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 482
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP+ F L NL YW+ Y+
Sbjct: 452 LTDVNAIDRWSRIIFPSVFSLFNLIYWLYYV 482
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 428 EMRKLFIQRAKKIDKISRIGFPMAFLIFNIFYWIIY 463
>gi|284795247|ref|NP_001165353.1| glycine receptor precursor [Ciona intestinalis]
gi|283945411|dbj|BAI66458.1| glycine receptor [Ciona intestinalis]
Length = 491
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 41/148 (27%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIP----FLVSSDEIRVHPHPKSYV--SEDEEDEQTN 56
+ A +LEFA V++ ++ I +L+ RV H + SED D+ T
Sbjct: 359 LLFVFAALLEFAVVNFLSRQQQRLIKVNMGWLIKQKSYRVTEHRSAPAPPSEDSGDDAT- 417
Query: 57 IHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHIN 116
R C V + +K P I ++ D Y+KK
Sbjct: 418 --------RYCIVGRL-PIKEEPPIKQSIAED---------YKKK--------------- 444
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISY 144
ID +SRI+FP +F + N+ YW+SY
Sbjct: 445 -ALAIDTLSRIIFPTTFLIFNIVYWLSY 471
>gi|351713341|gb|EHB16260.1| Gamma-aminobutyric acid receptor subunit theta, partial
[Heterocephalus glaber]
Length = 611
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
F+ + V ++DR RILFP SFGL N+ YW+ ++
Sbjct: 578 FNPDFVPRLDRWCRILFPLSFGLFNIVYWLYHM 610
>gi|296485094|tpg|DAA27209.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1
[Bos taurus]
Length = 519
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 462 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 518
>gi|300795409|ref|NP_001179689.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Bos
taurus]
Length = 519
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 462 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 518
>gi|156717762|ref|NP_001096421.1| gamma-aminobutyric acid (GABA) A receptor, beta 2 precursor
[Xenopus (Silurana) tropicalis]
gi|301624061|ref|XP_002941329.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Xenopus (Silurana) tropicalis]
gi|134026224|gb|AAI36090.1| LOC100125027 protein [Xenopus (Silurana) tropicalis]
Length = 474
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q IN V+ IDR SR++FP F N+ YW+ Y+
Sbjct: 417 ALERHVVQKKSRLRRRASQLKINIPDLTDVNAIDRWSRMIFPVVFSFFNIVYWLYYV 473
>gi|47219407|emb|CAG01570.1| unnamed protein product [Tetraodon nigroviridis]
Length = 430
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
+ + + ++EFA V+YFTK + D + + SE+ + N I
Sbjct: 296 YAFVFSALIEFATVNYFTKRS-------WAWDGKKEGMEIRRRESENLTKKTNNTFNI-- 346
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
V + Y I K + + A + Y K + + + N VS +D
Sbjct: 347 ---VGTTYAINVAK-DQGLTTISKSATAGAPAKQHYLHKMDDPYTEAKKSY--NRVSIVD 400
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
++SRI+FP F + NL YW +Y+
Sbjct: 401 KISRIIFPVLFFIFNLGYWATYV 423
>gi|382928889|gb|AFG29910.1| glutamate-gated chloride channel 5, partial [Tetranychus urticae]
Length = 444
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 120 KIDRVSRILFPASFGLLNLFYWISYI 145
+ID +SRILFP F L NL YWI+Y+
Sbjct: 417 RIDVLSRILFPTMFALFNLVYWITYL 442
>gi|118097240|ref|XP_414507.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Gallus
gallus]
Length = 433
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ + + +EK + ++SR F I + S +D S++LFP F L+N+FYW
Sbjct: 369 DNINCSDFTMKTHEKIKCFLRNKMSRIIGYFTIQNPSNVDHYSKLLFPLFFMLVNVFYWA 428
Query: 143 SYI 145
Y+
Sbjct: 429 YYL 431
>gi|311273938|ref|XP_003134108.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Sus
scrofa]
Length = 440
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGKAKEVEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ ++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLVFMLANVFYWAYYM 438
>gi|194219610|ref|XP_001500055.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Equus
caballus]
Length = 440
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ ++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFLFRDKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 404 EMRKLFIQRAKKIDKISRIGFPMAFLIFNIFYWIIY 439
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE+E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 421 RERETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 460
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYW++Y
Sbjct: 639 VDRAKRIDTISRAVFPLSFLIFNIFYWVTY 668
>gi|344257363|gb|EGW13467.1| Gamma-aminobutyric acid receptor subunit gamma-3 [Cricetulus
griseus]
Length = 198
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 161 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 196
>gi|301775017|ref|XP_002922932.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Ailuropoda melanoleuca]
gi|281339592|gb|EFB15176.1| hypothetical protein PANDA_011970 [Ailuropoda melanoleuca]
Length = 440
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTAKEVEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ ++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|260826496|ref|XP_002608201.1| hypothetical protein BRAFLDRAFT_90359 [Branchiostoma floridae]
gi|229293552|gb|EEN64211.1| hypothetical protein BRAFLDRAFT_90359 [Branchiostoma floridae]
Length = 295
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 34/145 (23%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + A +LE+AAV+Y + R + P+ + + ++T I + ++
Sbjct: 180 FVFVFAALLEYAAVNY----------------QSRYYKTPR----KSRKSKKTEIEEFQL 219
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQE---VSREGYQFHINSVS 119
+ K P V + N R++ S G + I V+
Sbjct: 220 EE-----------KKAPLAVPENDGSSAPAARNGTTRRRFPSPKVLTSFRGGRKIIEDVN 268
Query: 120 KIDRVSRILFPASFGLLNLFYWISY 144
ID+ SR+LFP +F + N YWI+Y
Sbjct: 269 DIDKFSRVLFPCTFAVFNAIYWITY 293
>gi|326928291|ref|XP_003210314.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Meleagris gallopavo]
Length = 613
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSED--EEDEQTNIH 58
+ F + ++E+A HY SS + R P+ + + +E E+ NI
Sbjct: 479 ICFTFIFGALVEYAVAHY-------------SSSQKRTAKTPQEGPANELTKEKEEINIT 525
Query: 59 KIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRK-KREQEVSREGYQFHINS 117
I + + S + + D ++ ++ + +EK + R + S GY F I +
Sbjct: 526 GI-LSNSITSYKQQISFTGIEISSDNINCSDLTMKTHEKIKCFLRNKIYSIIGY-FTIQN 583
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
S +D S++LFP F L+N+FYW Y+
Sbjct: 584 PSNVDHYSKLLFPLFFMLVNVFYWAYYL 611
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 403 EMRKLFIQRAKKIDKLSRIGFPMAFLIFNMFYWIIY 438
>gi|395546001|ref|XP_003774883.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Sarcophilus harrisii]
Length = 597
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 108 REG-YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI S++D SR+ FP +F L N+ YWI+Y+
Sbjct: 560 REGRVRIHI---SRLDTYSRVFFPTAFLLFNIVYWIAYL 595
>gi|51122|emb|CAA41988.1| gamma subunit of GABA-alpha receptor [Mus musculus]
Length = 467
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 430 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 465
>gi|395528587|ref|XP_003766410.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Sarcophilus harrisii]
Length = 246
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ +S++D SR+ FP SF L NL YW+ Y+
Sbjct: 209 RKG-RIHID-ISELDSYSRVFFPTSFLLFNLVYWVGYL 244
>gi|62531120|gb|AAH92617.1| Gabrg2 protein [Rattus norvegicus]
Length = 228
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 191 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 226
>gi|432100008|gb|ELK28901.1| Gamma-aminobutyric acid receptor subunit pi [Myotis davidii]
Length = 456
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + +LE+A HY + + + D PK E E+ NI I +
Sbjct: 330 FSFVFGALLEYAVAHY------SSLQQMAAKD----RGMPK-------EVEEVNITNI-I 371
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKID 122
+ + S + D + + + ++K++ ++ R F I + S +D
Sbjct: 372 NSSISSFKRKISFATIEISGDNVDYSNLTMKTSDKFKFVFRDKMGRIVDYFTIQNPSNVD 431
Query: 123 RVSRILFPASFGLLNLFYWISYI 145
R S++LFP F L N+FYW Y+
Sbjct: 432 RYSKLLFPLIFMLANVFYWAYYM 454
>gi|56182|emb|CAA44930.1| GABA-A receptor gamma-3 subunit [Rattus norvegicus]
gi|228277|prf||1802276A GABA receptor A:SUBUNIT=gamma3
Length = 467
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 430 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 465
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 411 EMRKLFIQRAKKIDKLSRIGFPMAFLIFNMFYWIIY 446
>gi|40288195|ref|NP_077346.3| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Rattus
norvegicus]
gi|120790|sp|P28473.1|GBRG3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|204200|gb|AAA41181.1| GABA-alpha receptor gamma-3 subunit [Rattus norvegicus]
gi|149031472|gb|EDL86452.1| gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 [Rattus
norvegicus]
Length = 467
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 430 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 465
>gi|354488287|ref|XP_003506302.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cricetulus griseus]
Length = 451
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 414 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 449
>gi|348543243|ref|XP_003459093.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oreochromis niloticus]
Length = 468
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 25/149 (16%)
Query: 2 SFFYCIATILEFAAVHYFT------KTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT 55
SF + +++E+AAV+Y T K G+IP ++ + D + E T
Sbjct: 338 SFLFVFLSVIEYAAVNYCTTLEEMRKMKRGKIPSTFNASQAMAFDG----CFHDNDIELT 393
Query: 56 NIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHI 115
++ TL P S+D + E R +R++ V RE +
Sbjct: 394 TFPRLA-----------PTLTSDPLTSPTQSSD---MRPTEGTRLRRQRSV-RENVDLLV 438
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISY 144
N+ ID SR+ FP S+ L N YW Y
Sbjct: 439 NNSYMIDSYSRLAFPLSYLLFNTIYWSMY 467
>gi|345799376|ref|XP_546242.3| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Canis lupus
familiaris]
Length = 440
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D + ++ + ++K++ ++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVDYSDLTMKTSDKFKLVFRDKMGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
>gi|348571661|ref|XP_003471614.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cavia porcellus]
Length = 416
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 256 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 300
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGY- 111
++VD + S EIR ++ +S + + A+ +YRK SREGY
Sbjct: 301 VQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPMS---SREGYG 357
Query: 112 -------------------QFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 358 RALERHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 415
>gi|444516738|gb|ELV11271.1| Gamma-aminobutyric acid receptor subunit gamma-3 [Tupaia chinensis]
Length = 230
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ +S++D SR+ FP SF L NL YW+ Y+
Sbjct: 193 RKG-RVHID-ISELDSYSRVFFPTSFLLFNLVYWVGYL 228
>gi|426246261|ref|XP_004016913.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Ovis aries]
Length = 440
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGKAKEVEEVNITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ ++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKLGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 414 VDRYSKLLFPLIFMLANVFYWAYYM 438
>gi|117168291|ref|NP_032100.2| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Mus
musculus]
gi|408360111|sp|P27681.2|GBRG3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|148689916|gb|EDL21863.1| mCG141422 [Mus musculus]
gi|151555263|gb|AAI48536.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 3
[synthetic construct]
Length = 467
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI+ VS++D SR+ FP SF L NL YW+ Y+
Sbjct: 430 RRG-RIHID-VSELDSYSRVFFPTSFLLFNLVYWVGYL 465
>gi|71981619|ref|NP_496306.2| Protein GGR-1 [Caenorhabditis elegans]
gi|56757652|sp|Q09453.2|GLRB4_CAEEL RecName: Full=Glycine receptor subunit beta-type 4; Flags:
Precursor
gi|50507463|emb|CAA86760.2| Protein GGR-1 [Caenorhabditis elegans]
Length = 473
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ KIDR SR LFP +F + N+FYWI Y+
Sbjct: 433 NAQKIDRYSRALFPLAFIIFNIFYWIYYL 461
>gi|344298009|ref|XP_003420687.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Loxodonta africana]
Length = 474
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 26/70 (37%)
Query: 102 REQEVSREGYQFHINS--------------------------VSKIDRVSRILFPASFGL 135
R+Q V REG+ H+ V+ IDR SRI+FP +F L
Sbjct: 404 RKQSVPREGHGRHMGDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSL 463
Query: 136 LNLFYWISYI 145
NL YW+ Y+
Sbjct: 464 FNLVYWLYYV 473
>gi|307172928|gb|EFN64095.1| Glutamate-gated chloride channel [Camponotus floridanus]
Length = 331
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++ + SD I+ P SE E + ++
Sbjct: 198 FVFGALLEFALVNYASRSD-------MHSDNIKKQFPP----SEMEHSSSIDPSSELLEP 246
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
+ + ++ L P D +S D+ L E + + R++ R +ID +
Sbjct: 247 DGSANFAMKPLVRHPE--DSMSMDK--LRQCEIHMQPRKKNCCRSWLSKFPTRSKRIDVI 302
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F NL YW +Y+ +E
Sbjct: 303 SRIFFPIVFAFFNLAYWSTYLFREE 327
>gi|301787803|ref|XP_002929318.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Ailuropoda melanoleuca]
Length = 206
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 169 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 204
>gi|62901525|sp|Q94900.2|GLUCL_DROME RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl;
Flags: Precursor
Length = 456
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK--V 62
+ +LEFA V+Y +++GS + + H +S + + EQ ++ +
Sbjct: 317 FVFGALLEFALVNYASRSGSN-----------KANMHKESMKKKRRDLEQASLDAASDLL 365
Query: 63 DYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK-- 120
D + + ++ L P D L+ ++ KR +F S+
Sbjct: 366 DTDSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSK 423
Query: 121 -IDRVSRILFPASFGLLNLFYWISYITDQE 149
ID +SRI FP F L NL YW +Y+ +E
Sbjct: 424 RIDVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+++ VS ID+ SR++FP FG NL YW+ Y+
Sbjct: 446 NLSDVSTIDKWSRVIFPIIFGFFNLIYWLYYV 477
>gi|348537180|ref|XP_003456073.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Oreochromis niloticus]
Length = 473
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVH--------PHPKSYVSEDEED 52
+SF + ++LE+AAV+Y T G+ L + + PH K+ + +
Sbjct: 333 VSFVFVFLSVLEYAAVNYLTTLRDGKDRKLREKVKEQSQTLPCTCGMPHTKTMMLDGTYS 392
Query: 53 EQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
E+ D + Y R V +I D+ V+L + + +++ + G++
Sbjct: 393 EE--------DANSLAGYT-RASMVAEDISDKQEQMVVHLSLDNESTGTKKKGI--RGFR 441
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
I + ID SR++FP ++ L NL YW Y
Sbjct: 442 I-IQNTHAIDTYSRMIFPGAYILFNLIYWCVY 472
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKPY---VDQAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|195569618|ref|XP_002102806.1| GD19310 [Drosophila simulans]
gi|194198733|gb|EDX12309.1| GD19310 [Drosophila simulans]
Length = 448
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 311 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 361
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
+ + ++ L P D L+ ++ KR +F S +ID +
Sbjct: 362 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRS-KRIDVI 418
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F L NL YW +Y+ +E
Sbjct: 419 SRITFPLVFALFNLVYWSTYLFREE 443
>gi|348552638|ref|XP_003462134.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cavia porcellus]
Length = 630
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ ++++D SR+ FP SF L NL YW+ Y+
Sbjct: 593 RKG-RIHID-IAELDSYSRVFFPTSFLLFNLVYWVGYL 628
>gi|256088847|ref|XP_002580535.1| Cys-loop ligand gated ion channel subunit [Schistosoma mansoni]
gi|360044035|emb|CCD81582.1| putative cys-loop ligand gated ion channel subunit [Schistosoma
mansoni]
Length = 511
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 29 FLVSSDEIRVHPHPKSYVSEDEED--EQTNIHKIKVDYRVCSV-YEIRTLKVCPNIVDQL 85
F + + + P P+ V + NI K D V YE+ T +D
Sbjct: 399 FAIQNSPVLERPSPQMSVRLTKSGLMSMANIKSGKSDKVSKGVFYELVTNDSALTALDTT 458
Query: 86 STDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
D + L NE R K+ S+SKID SR +FPA F L N FYW+ Y+
Sbjct: 459 QKDAL-LPPNEPQRAKKPA------------SMSKIDSYSRFVFPACFLLYNCFYWLYYL 505
>gi|327283448|ref|XP_003226453.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Anolis carolinensis]
Length = 458
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 108 REGY-QFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REGY + HI S++D SR+ FP +F L N+ YW++Y+
Sbjct: 421 REGYLRIHI---SRLDSYSRVFFPTAFLLFNIVYWMAYL 456
>gi|194899919|ref|XP_001979505.1| GG23471 [Drosophila erecta]
gi|190651208|gb|EDV48463.1| GG23471 [Drosophila erecta]
Length = 453
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 318 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 368
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
+ + ++ L P D L+ ++ KR +F S +ID +
Sbjct: 369 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRS-KRIDVI 425
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F L NL YW +Y+ +E
Sbjct: 426 SRITFPLVFALFNLVYWSTYLFREE 450
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ YI
Sbjct: 417 ALERHVAQKKSHLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYI 473
>gi|341879556|gb|EGT35491.1| CBN-LGC-52 protein [Caenorhabditis brenneri]
Length = 423
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWK 154
+ IDRV+ +LFP +F L NL YW Y+T N V+
Sbjct: 388 ASIDRVASMLFPTTFALFNLVYWSYYLTTSMNPVYS 423
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 322 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 366
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK SREGY
Sbjct: 367 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLS---SREGYG 423
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 424 RALDRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 481
>gi|431917312|gb|ELK16845.1| Gamma-aminobutyric acid receptor subunit beta-3 [Pteropus alecto]
Length = 386
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 102 REQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ ++ R Q I V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 337 KKTQLRRRSSQLRIKIPDLTDVNAIDRWSRVVFPLTFSLFNLVYWLYYV 385
>gi|296193682|ref|XP_002744595.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Callithrix
jacchus]
Length = 440
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D++ ++ + +K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DKVDYSDLTMKTRDKFKFVFREKMGRIVDYFTIQNPSNVDRYSKLLFPLIFMLSNVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
>gi|195355481|ref|XP_002044220.1| GM22599 [Drosophila sechellia]
gi|194129509|gb|EDW51552.1| GM22599 [Drosophila sechellia]
Length = 466
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F + A +LE+AAV+Y T G+ P K SE E T I
Sbjct: 295 MCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKECCPG-KIGKSERSETCSTTEDII 350
Query: 61 KV-DYRVCSVYEIRTLKVCPNIVDQLSTDEVNL--------------VANEKYRKKREQE 105
++ D R+ + +R +D + T+ +NL + + R++ ++
Sbjct: 351 ELQDVRMSPIPSLRR-GTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRG 409
Query: 106 VSREGYQFH---------------INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+S H I V+ ID+ SR++FP SF NL YW+ YI
Sbjct: 410 ISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 464
>gi|432118040|gb|ELK37977.1| Gamma-aminobutyric acid receptor subunit gamma-3 [Myotis davidii]
Length = 318
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ +S++D SR+ FP SF L NL YW+ Y+
Sbjct: 281 RKG-RIHID-ISELDAYSRVFFPTSFLLFNLVYWVGYL 316
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I + V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 458 ALERHMTQKKSRLRRRASQLKITIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYV 514
>gi|426397781|ref|XP_004065084.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Gorilla
gorilla gorilla]
Length = 632
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + + + K+D+ SR LFP +FGL N+ YW+ ++
Sbjct: 592 EGFSFDLFNPDYLPKVDKWSRFLFPLAFGLFNIVYWVYHM 631
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+E E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 437 KEGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 476
>gi|344248782|gb|EGW04886.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Cricetulus
griseus]
Length = 229
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 192 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 227
>gi|195112120|ref|XP_002000624.1| GI22423 [Drosophila mojavensis]
gi|193917218|gb|EDW16085.1| GI22423 [Drosophila mojavensis]
Length = 493
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++G ++ +H D E + +D
Sbjct: 358 FVFGALLEFALVNYASRSGL---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 408
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
+ + ++ L P D L+ +++ KR +F S +ID +
Sbjct: 409 DSNATFAMKPLVRHPG--DPLALEKLRQCEVHMQPPKRPSCCKTWLSKFPTRS-KRIDVI 465
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F L NL YW +Y+ +E
Sbjct: 466 SRITFPLVFALFNLVYWSTYLFREE 490
>gi|395527076|ref|XP_003765677.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Sarcophilus harrisii]
Length = 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 441 LTDVNAIDRWSRIVFPFTFSLFNLIYWLYYV 471
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I KID++SRI FP +F + N+FYWI Y
Sbjct: 404 EMRKLFIQRAKKIDKMSRIGFPMAFLIFNIFYWIIY 439
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 94 ANEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ +R K+ + + R Q I V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 414 GDRNFRHKKTR-LRRRSSQLQIKIPDLTDVNSIDRWSRVVFPFTFSLFNLIYWLYYV 469
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE+E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 407 REEETMRKLY---VDRAKRIDTISRAVFPFTFLIFNVFYWVVY 446
>gi|332256201|ref|XP_003277206.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Nomascus leucogenys]
Length = 402
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 371 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 401
>gi|355689544|gb|AER98868.1| gamma-aminobutyric acid A receptor, gamma 2 [Mustela putorius furo]
Length = 71
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
++K+D +RI FP +F L NL YW+SY+
Sbjct: 43 IAKMDSYARIFFPTAFCLFNLVYWVSYL 70
>gi|332843341|ref|XP_003314620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Pan troglodytes]
gi|397515749|ref|XP_003828108.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan paniscus]
gi|410305768|gb|JAA31484.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Pan troglodytes]
Length = 402
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 371 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 401
>gi|221040640|dbj|BAH11997.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 371 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 401
>gi|126337134|ref|XP_001362985.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Monodelphis domestica]
Length = 473
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLIYWLYYV 472
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E +R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETTRKLY---MDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|300797181|ref|NP_001178250.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 4 [Homo
sapiens]
gi|119578059|gb|EAW57655.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_c
[Homo sapiens]
Length = 402
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 371 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 401
>gi|440910237|gb|ELR60053.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Bos
grunniens mutus]
Length = 393
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 362 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 392
>gi|432098881|gb|ELK28376.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Myotis davidii]
Length = 497
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 460 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 495
>gi|119581938|gb|EAW61534.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_c
[Homo sapiens]
Length = 327
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 290 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 325
>gi|341899296|gb|EGT55231.1| hypothetical protein CAEBREN_28145 [Caenorhabditis brenneri]
Length = 456
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 76 KVCPN--IVDQLSTDEVNLVANEK-YRKKREQEVSREG--YQFHI------NSVSKIDRV 124
K CP+ ++D L EK + E+ +R G +F I S KIDRV
Sbjct: 359 KKCPHKKLIDNFEASPAGLCRYEKRFMLPVERRSARWGGFMRFQIFQDFWNWSPEKIDRV 418
Query: 125 SRILFPASFGLLNLFYWISY 144
S ILFPA F + N+ YW Y
Sbjct: 419 SAILFPACFAIFNIVYWSYY 438
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + + KID+ SRI FP +F + N+FYWI Y
Sbjct: 502 EMRKLFVQRAKKIDKFSRIGFPMAFLIFNIFYWIIY 537
>gi|34328527|ref|NP_899156.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Rattus
norvegicus]
gi|120788|sp|P18508.1|GBRG2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|204218|gb|AAC42036.1| GABA-A receptor gamma-2 subunit [Rattus norvegicus]
Length = 466
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 429 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 464
>gi|355692545|gb|EHH27148.1| hypothetical protein EGK_17280, partial [Macaca mulatta]
gi|355777888|gb|EHH62924.1| hypothetical protein EGM_15786, partial [Macaca fascicularis]
Length = 394
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 363 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 393
>gi|348552646|ref|XP_003462138.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cavia porcellus]
Length = 421
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 390 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 420
>gi|410920808|ref|XP_003973875.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 474
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP SF L N+ YW+ Y+
Sbjct: 443 LTDVNAIDRWSRIIFPFSFSLFNVIYWLYYV 473
>gi|350536015|ref|NP_001234895.1| ligand-gated chloride channel homolog 3 precursor [Nasonia
vitripennis]
gi|269856291|gb|ACZ51428.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 512
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
I V+ ID+ SRI+FP SF L N YWI Y+
Sbjct: 481 IKDVNLIDKYSRIIFPVSFMLFNAGYWIFYV 511
>gi|281353485|gb|EFB29069.1| hypothetical protein PANDA_010809 [Ailuropoda melanoleuca]
Length = 320
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 289 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 319
>gi|449267234|gb|EMC78200.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial [Columba
livia]
Length = 430
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 393 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 428
>gi|410949360|ref|XP_003981391.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Felis catus]
Length = 467
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|354490880|ref|XP_003507584.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit gamma-2-like [Cricetulus griseus]
Length = 458
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 421 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 456
>gi|426248009|ref|XP_004017758.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Ovis
aries]
Length = 387
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 356 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 386
>gi|57085659|ref|XP_546259.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Canis lupus familiaris]
Length = 467
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|53765741|gb|AAU93411.1| testis gamma-aminobutyric acid receptor subunit beta 3 [Rattus
norvegicus]
Length = 471
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 440 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 470
>gi|46371159|gb|AAS90348.1| GABA-A gamma2 long isoform [Rattus norvegicus]
gi|149052302|gb|EDM04119.1| gamma-aminobutyric acid A receptor, gamma 2 [Rattus norvegicus]
Length = 474
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|431918113|gb|ELK17341.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Pteropus alecto]
Length = 467
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|426230046|ref|XP_004009094.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Ovis aries]
Length = 467
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|74205307|dbj|BAE23157.1| unnamed protein product [Mus musculus]
Length = 445
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 408 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 443
>gi|403306399|ref|XP_003943724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Saimiri boliviensis boliviensis]
Length = 413
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 382 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 412
>gi|390464123|ref|XP_002806936.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Callithrix jacchus]
gi|390464125|ref|XP_003733172.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Callithrix jacchus]
Length = 388
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|354499223|ref|XP_003511710.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cricetulus griseus]
Length = 323
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 292 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 322
>gi|149726126|ref|XP_001503417.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Equus caballus]
Length = 467
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|444741657|ref|NP_803127.3| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Mus musculus]
Length = 466
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 429 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 464
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A +++ +++ + R Q I V+ ID+ SRI+FP F N+ YW+ Y+
Sbjct: 460 ALDRHMTQKKSRLRRRASQLKITIPDLTDVNSIDKWSRIIFPTVFSFFNIVYWLYYV 516
>gi|426378388|ref|XP_004055909.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Gorilla gorilla gorilla]
gi|426378390|ref|XP_004055910.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
5 [Gorilla gorilla gorilla]
Length = 388
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|296485089|tpg|DAA27204.1| TPA: gamma-aminobutyric acid receptor subunit gamma-2 precursor
[Bos taurus]
gi|440892011|gb|ELR45398.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Bos grunniens
mutus]
Length = 475
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 498 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 528
>gi|344265230|ref|XP_003404688.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Loxodonta africana]
Length = 475
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|332256203|ref|XP_003277207.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Nomascus leucogenys]
gi|332256205|ref|XP_003277208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Nomascus leucogenys]
Length = 388
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|327260685|ref|XP_003215164.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Anolis carolinensis]
Length = 474
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|149726124|ref|XP_001503421.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Equus caballus]
Length = 475
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|73953524|ref|XP_867037.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
5 [Canis lupus familiaris]
Length = 475
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|46047386|ref|NP_990676.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Gallus
gallus]
gi|120785|sp|P21548.1|GBRG2_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|62897|emb|CAA38704.1| GABA-A receptor gamma-2 subunit [Gallus gallus]
Length = 474
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|395817120|ref|XP_003782023.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Otolemur garnettii]
Length = 467
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|344265232|ref|XP_003404689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Loxodonta africana]
Length = 467
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|326928314|ref|XP_003210325.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Meleagris gallopavo]
Length = 474
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|221044268|dbj|BAH13811.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|120419440|gb|ABM21539.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 343
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 312 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 342
>gi|444518645|gb|ELV12281.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Tupaia chinensis]
Length = 467
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|426378386|ref|XP_004055908.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Gorilla gorilla gorilla]
Length = 440
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 409 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 439
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+ RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 404 RLREGETMRKLY---VDQAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|403306401|ref|XP_003943725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Saimiri boliviensis boliviensis]
Length = 388
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|395505016|ref|XP_003756842.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Sarcophilus harrisii]
Length = 467
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|332843344|ref|XP_003339315.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Pan
troglodytes]
gi|332843346|ref|XP_003314621.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Pan troglodytes]
gi|397515751|ref|XP_003828109.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan paniscus]
Length = 388
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|119578058|gb|EAW57654.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_b
[Homo sapiens]
Length = 409
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 378 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 408
>gi|26338570|dbj|BAC32956.1| unnamed protein product [Mus musculus]
Length = 453
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 416 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 451
>gi|27806989|ref|NP_776970.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Bos
taurus]
gi|120784|sp|P22300.1|GBRG2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|163070|gb|AAA30531.1| gamma-aminobutyrate receptor type A gamma-2 subuni [Bos taurus]
Length = 475
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|6679915|ref|NP_032099.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Mus musculus]
gi|20141351|sp|P22723.3|GBRG2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|14626496|gb|AAK71573.1|AF233775_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626500|gb|AAK71575.1|AF233777_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626510|gb|AAK71580.1|AF233782_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626514|gb|AAK71582.1|AF233784_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626520|gb|AAK71585.1|AF233787_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626522|gb|AAK71586.1|AF233788_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626524|gb|AAK71587.1|AF233789_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626526|gb|AAK71588.1|AF233790_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626528|gb|AAK71589.1|AF233791_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626536|gb|AAK71593.1|AF233795_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626542|gb|AAK71596.1|AF233798_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626546|gb|AAK71598.1|AF233800_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626548|gb|AAK71599.1|AF233801_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|193404|gb|AAA37653.1| GABA-alpha receptor gamma-2 subunit [Mus musculus]
gi|21619326|gb|AAH31762.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 [Mus
musculus]
gi|148700391|gb|EDL32338.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_a [Mus musculus]
Length = 474
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 498 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 528
>gi|334350526|ref|XP_001374501.2| PREDICTED: glycine receptor subunit alpha-4-like [Monodelphis
domestica]
Length = 387
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 336 REGETVRKRY---VDRAKRIDTISRAIFPFTFLIFNIFYWVVY 375
>gi|335304135|ref|XP_003359873.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 [Sus
scrofa]
Length = 467
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|194389092|dbj|BAG61563.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 335 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 370
>gi|14626498|gb|AAK71574.1|AF233776_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626502|gb|AAK71576.1|AF233778_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626504|gb|AAK71577.1|AF233779_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626506|gb|AAK71578.1|AF233780_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626508|gb|AAK71579.1|AF233781_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626512|gb|AAK71581.1|AF233783_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626516|gb|AAK71583.1|AF233785_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626518|gb|AAK71584.1|AF233786_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626530|gb|AAK71590.1|AF233792_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626532|gb|AAK71591.1|AF233793_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626534|gb|AAK71592.1|AF233794_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626538|gb|AAK71594.1|AF233796_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626540|gb|AAK71595.1|AF233797_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626544|gb|AAK71597.1|AF233799_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626550|gb|AAK71600.1|AF233802_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
Length = 474
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 472
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|426230044|ref|XP_004009093.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Ovis aries]
Length = 475
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|71999575|ref|NP_502839.2| Protein LGC-52 [Caenorhabditis elegans]
gi|50470603|emb|CAB60529.2| Protein LGC-52 [Caenorhabditis elegans]
Length = 434
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
+ IDRV+ +LFP F L NL YW Y+T N V+
Sbjct: 399 ASIDRVASMLFPTMFALFNLVYWAYYLTTSMNPVY 433
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|410949358|ref|XP_003981390.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Felis catus]
Length = 475
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|403287086|ref|XP_003934788.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 467
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|395817118|ref|XP_003782022.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Otolemur garnettii]
Length = 475
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|296192687|ref|XP_002744181.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Callithrix jacchus]
Length = 475
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 416 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 446
>gi|410040004|ref|XP_003311017.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 [Pan
troglodytes]
Length = 430
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 393 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 428
>gi|403287088|ref|XP_003934789.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 475
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|300797159|ref|NP_001178249.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 3 [Homo
sapiens]
Length = 388
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 357 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 387
>gi|296192689|ref|XP_002744182.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Callithrix jacchus]
Length = 467
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|355750396|gb|EHH54734.1| hypothetical protein EGM_15626 [Macaca fascicularis]
Length = 515
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|351699570|gb|EHB02489.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial
[Heterocephalus glaber]
Length = 468
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 431 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 466
>gi|308451406|ref|XP_003088660.1| hypothetical protein CRE_23257 [Caenorhabditis remanei]
gi|308246205|gb|EFO90157.1| hypothetical protein CRE_23257 [Caenorhabditis remanei]
Length = 119
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
+ IDRV+ +LFP F L NL YW Y+T N V+
Sbjct: 84 ASIDRVASMLFPTMFALFNLVYWSYYLTTSMNPVY 118
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 441 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 471
>gi|31637|emb|CAA33437.1| GABA-A receptor gamma 2 subunit [Homo sapiens]
gi|226325|prf||1506443A GABAa receptor gamma2
Length = 467
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|311273985|ref|XP_003134135.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sus scrofa]
Length = 475
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|301772918|ref|XP_002921880.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Ailuropoda melanoleuca]
Length = 473
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 441 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 471
>gi|38788155|ref|NP_944494.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Homo sapiens]
gi|332238953|ref|XP_003268667.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Nomascus leucogenys]
gi|397473094|ref|XP_003808055.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Pan paniscus]
gi|426350892|ref|XP_004042997.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Gorilla gorilla gorilla]
gi|119581936|gb|EAW61532.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_a
[Homo sapiens]
gi|380783785|gb|AFE63768.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Macaca mulatta]
Length = 475
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|38788135|ref|NP_000807.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Homo sapiens]
gi|197097822|ref|NP_001127212.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Pongo
abelii]
gi|387763055|ref|NP_001248707.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Macaca
mulatta]
gi|332238955|ref|XP_003268668.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Nomascus leucogenys]
gi|397473096|ref|XP_003808056.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Pan paniscus]
gi|426350890|ref|XP_004042996.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Gorilla gorilla gorilla]
gi|75061993|sp|Q5REA1.1|GBRG2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|5738138|gb|AAD50273.1| gamma-aminobutyric acid A receptor gamma 2 [Homo sapiens]
gi|46854833|gb|AAH69348.1| Gamma-aminobutyric acid A receptor, gamma 2, isoform 2 precursor
[Homo sapiens]
gi|50959647|gb|AAH74795.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
gi|55726269|emb|CAH89906.1| hypothetical protein [Pongo abelii]
gi|119581937|gb|EAW61533.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_b
[Homo sapiens]
gi|380783787|gb|AFE63769.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Macaca mulatta]
Length = 467
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|397473098|ref|XP_003808057.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Pan paniscus]
Length = 515
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|390179625|ref|XP_003736943.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859925|gb|EIM53016.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 452
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKSNMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRV 124
+ + ++ L P D L+ ++ KR +F S +ID +
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRS-KRIDVI 424
Query: 125 SRILFPASFGLLNLFYWISYITDQE 149
SRI FP F L NL YW +Y+ +E
Sbjct: 425 SRITFPLVFALFNLVYWSTYLFREE 449
>gi|355691822|gb|EHH27007.1| hypothetical protein EGK_17101 [Macaca mulatta]
Length = 515
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|119581939|gb|EAW61535.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_d
[Homo sapiens]
Length = 515
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|37590803|gb|AAH59389.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
Length = 475
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 419 REGETVRKHY---VDRAKRIDTISRAIFPFTFLIFNIFYWVVY 458
>gi|395505014|ref|XP_003756841.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sarcophilus harrisii]
Length = 475
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|332238957|ref|XP_003268669.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Nomascus leucogenys]
Length = 515
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|338713090|ref|XP_003362822.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Equus
caballus]
Length = 411
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 354 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 410
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|431918134|gb|ELK17362.1| Gamma-aminobutyric acid receptor subunit pi [Pteropus alecto]
Length = 729
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY + + + D R P +E E+ NI I
Sbjct: 601 ICFSFVFGALLEYAVAHY------SSLQQMAAKD--RGMP---------KEVEEVNITNI 643
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + +++ ++K++ ++ R F I + S
Sbjct: 644 -INSSISSFKRKISFATIEISGDNVDYSNLSMKTSDKFKFVFRDKMDRIVDYFTIQNPSN 702
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR S++LFP F L N+FYW Y+
Sbjct: 703 VDRYSKLLFPLIFMLANVFYWAYYM 727
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 444 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 474
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|334311173|ref|XP_001380042.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Monodelphis domestica]
Length = 497
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 460 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 495
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|189083762|ref|NP_944493.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 3
precursor [Homo sapiens]
Length = 515
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|426378384|ref|XP_004055907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Gorilla gorilla gorilla]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|426350894|ref|XP_004042998.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Gorilla gorilla gorilla]
Length = 515
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 478 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 513
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|348575247|ref|XP_003473401.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Cavia porcellus]
Length = 475
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 438 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 473
>gi|313234236|emb|CBY10304.1| unnamed protein product [Oikopleura dioica]
Length = 115
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
I VS IDRVSR++FP +F + N+ YW YI
Sbjct: 83 IKDVSIIDRVSRVVFPFTFIIFNIIYWTYYI 113
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|226483407|emb|CAX74004.1| glycine receptor, alpha 1 [Schistosoma japonicum]
Length = 511
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYI 145
S+SKID SR +FPA F L N FYW+ Y+
Sbjct: 477 SMSKIDSYSRFVFPACFLLYNCFYWLYYL 505
>gi|189067536|dbj|BAG37715.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|332843339|ref|XP_003314619.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan troglodytes]
Length = 473
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 419 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 475
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 444 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 474
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 472
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 416 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 472
>gi|350578855|ref|XP_003480465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Sus scrofa]
Length = 271
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 240 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 270
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|348575249|ref|XP_003473402.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Cavia porcellus]
Length = 467
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 430 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 465
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKLY---VDQAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 419 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 475
>gi|449475199|ref|XP_002189346.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Taeniopygia guttata]
Length = 490
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 453 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 488
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
+ +ID +SR +FP SF + N+FYW++Y
Sbjct: 489 VEQAKRIDTISRAVFPLSFLVFNVFYWVTY 518
>gi|444518648|gb|ELV12284.1| Gamma-aminobutyric acid receptor subunit beta-2 [Tupaia chinensis]
Length = 281
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 224 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 280
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 416 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 472
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|345307914|ref|XP_003428636.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 427 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 462
>gi|260792090|ref|XP_002591060.1| hypothetical protein BRAFLDRAFT_69385 [Branchiostoma floridae]
gi|229276260|gb|EEN47071.1| hypothetical protein BRAFLDRAFT_69385 [Branchiostoma floridae]
Length = 206
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 110 GYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
G + I + + ID+ SRI+FP+ F +LN+ YW +Y+ + FV+
Sbjct: 163 GRRPQIKNSNNIDKYSRIMFPSLFIVLNIVYWSTYLYRRHYFVF 206
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 424 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 480
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
+ +ID +SR +FP SF + N+FYW++Y
Sbjct: 449 VEQAKRIDTISRAVFPLSFLVFNVFYWVTY 478
>gi|198420850|ref|XP_002119743.1| PREDICTED: similar to gamma-aminobutyric acid A receptor, alpha 6
[Ciona intestinalis]
Length = 500
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
VS+IDRVSR+ FP +F N YW Y++ Q
Sbjct: 458 GGVSRIDRVSRVAFPLAFFFFNGIYWFVYLSHQ 490
>gi|47217916|emb|CAG06522.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP+ F + NL YW+ Y+
Sbjct: 428 LTDVNAIDRWSRIIFPSVFSIFNLIYWLYYV 458
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 419 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 475
>gi|193406|gb|AAB59635.1| gamma-aminobutyric acid A receptor gamma-2 subunit [Mus musculus]
Length = 466
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 118 VSKIDRVSRILFPASFGLLNLFYWISYI 145
++K+D +RI FP +F L NL YW+SY+
Sbjct: 437 IAKMDSYARIFFPTAFCLFNLVYWVSYL 464
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 107 SREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY-ITDQENF 151
+ E + I+ KID VSR FP +F N+FYW+ Y I E+F
Sbjct: 572 TEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLYKILRHEDF 617
>gi|348506723|ref|XP_003440907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 482
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP+ F + NL YW+ Y+
Sbjct: 452 LTDVNAIDRWSRIIFPSVFSIFNLIYWLYYV 482
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 417 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 473
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R + +++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 402 REGETMR---KLYVDRAKRIDTISRAVFPFTFLIFNIFYWVVY 441
>gi|296231841|ref|XP_002761339.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Callithrix jacchus]
Length = 467
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + D ++ + D + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTAEERKQFKKTGKISRMYNIDAVQAMAFDGCFHDADIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C STD R R + + +
Sbjct: 396 QTSLSLNSEDF-------VRRKSICSP-----STDSS--------RITRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SR+LFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRVLFPIVYILFNLFYWGVYV 467
>gi|335308695|ref|XP_003361336.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like,
partial [Sus scrofa]
Length = 252
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 221 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 251
>gi|119578057|gb|EAW57653.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_a
[Homo sapiens]
Length = 293
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 262 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYV 292
>gi|1507685|gb|AAC47266.1| glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|402873298|ref|XP_003900516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Papio anubis]
Length = 359
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 302 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 358
>gi|313228825|emb|CBY17976.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKV 62
F + +LE+A V+Y F + H + +E + +N + ++
Sbjct: 212 FVFVFMALLEYAVVNY---------SFYGRRRMLSRQRHSQMLEKSEESHDYSNSYGSRI 262
Query: 63 DYRVC--SVYEIRTLK--VCPNI-VDQLSTDEV--NLVANEKYRKKREQEVSREGYQFHI 115
R C S RTL+ PN V QL+ + N+ + + R +R + +S I
Sbjct: 263 --RTCRDSSAGERTLRQRSVPNGDVPQLTVPKFLKNMSSKDAKRLRRFKALS----VCDI 316
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
VS ID SR FP SF + N+ YW Y TD W
Sbjct: 317 KDVSVIDEFSRRAFPISFIVFNIIYWTYYKTDWSKLSW 354
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETTGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|296485095|tpg|DAA27210.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2
[Bos taurus]
Length = 481
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 424 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 480
>gi|442619962|ref|NP_732447.2| GluClalpha, isoform I [Drosophila melanogaster]
gi|440217634|gb|AAN13808.2| GluClalpha, isoform I [Drosophila melanogaster]
Length = 456
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|432118043|gb|ELK37980.1| Gamma-aminobutyric acid receptor subunit beta-3 [Myotis davidii]
Length = 96
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ V+ IDR SRI+FP +F L NL YW+ Y+
Sbjct: 65 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN 96
>gi|221040004|dbj|BAH11765.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 257 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 313
>gi|442619970|ref|NP_650827.3| GluClalpha, isoform M [Drosophila melanogaster]
gi|195353590|ref|XP_002043287.1| GM26860 [Drosophila sechellia]
gi|195498017|ref|XP_002096345.1| GE25622 [Drosophila yakuba]
gi|194127401|gb|EDW49444.1| GM26860 [Drosophila sechellia]
gi|194182446|gb|EDW96057.1| GE25622 [Drosophila yakuba]
gi|440217638|gb|AAF55695.2| GluClalpha, isoform M [Drosophila melanogaster]
Length = 456
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 86 STDEVNLVANEKYRKKREQEVSREG---YQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
+ D V + + Y + + REG + +++ +ID +SR +FP +F + N+FYW+
Sbjct: 384 ARDGVPIEGSGIYSPQPPVPLLREGETLRKLYVDQAKRIDTISRAVFPFTFLIFNIFYWV 443
Query: 143 SY 144
Y
Sbjct: 444 VY 445
>gi|348506864|ref|XP_003440977.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Oreochromis niloticus]
Length = 450
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + H+N + ++D SR+ FP SF L N+ YW+SY+
Sbjct: 413 RKG-RIHVN-IRELDAYSRVFFPTSFLLFNIVYWVSYL 448
>gi|442619964|ref|NP_001262740.1| GluClalpha, isoform J [Drosophila melanogaster]
gi|440217635|gb|AGB96120.1| GluClalpha, isoform J [Drosophila melanogaster]
Length = 457
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 318 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 368
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 369 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 426
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 427 DVISRITFPLVFALFNLVYWSTYLFREE 454
>gi|11875639|gb|AAG40735.1|AF297500_1 glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 401 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 440
>gi|449485790|ref|XP_002190704.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Taeniopygia guttata]
Length = 469
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+SF + +++E+AAV+Y T G+ + S D ++ Y DE+ +
Sbjct: 337 ISFLFVFLSVIEYAAVNYLTTIEERKQLKKRGKASGMYSMDAVQAMAFDGCYHDTDEDMD 396
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
+ + C E R + N+ + R KR++ + +
Sbjct: 397 LSPFPE------PCEENETRA-------------SQTNISNADTPRLKRKRSLKGNVSRI 437
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRI+FP+ + + N FYW YI
Sbjct: 438 ILQNNHVIDTYSRIIFPSVYIVFNFFYWGLYI 469
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 REGETMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|126337124|ref|XP_001362811.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Monodelphis domestica]
Length = 466
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ ++++D SR+ FP SF L NL YW+ Y+
Sbjct: 429 RKG-RIHID-IAELDSYSRVFFPTSFLLFNLVYWVGYL 464
>gi|195054531|ref|XP_001994178.1| GH15301 [Drosophila grimshawi]
gi|195395766|ref|XP_002056505.1| GJ10981 [Drosophila virilis]
gi|193896048|gb|EDV94914.1| GH15301 [Drosophila grimshawi]
gi|194143214|gb|EDW59617.1| GJ10981 [Drosophila virilis]
Length = 456
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++G ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGL---------NKANMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ +++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKLRQCEVHMQPPKRPSCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|326913724|ref|XP_003203184.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Meleagris gallopavo]
Length = 455
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 424 LTDVNAIDRWSRMVFPFTFSLFNLIYWLYYV 454
>gi|126342458|ref|XP_001376848.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Monodelphis domestica]
Length = 562
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 108 REG-YQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI S++D SR+ FP +F L N+ YWI+Y+
Sbjct: 525 REGRVRIHI---SRLDTYSRVFFPTAFLLFNVVYWIAYL 560
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I +ID VSR+ FP F + N+FYWI+Y
Sbjct: 402 EMKKLFIGRAKRIDTVSRVAFPLVFLIFNIFYWITY 437
>gi|395857170|ref|XP_003800979.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Otolemur
garnettii]
Length = 649
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
F+ + V ++D+ SR LFP +FGL N+ YW+ +I
Sbjct: 616 FNPDYVPRVDKWSRFLFPLAFGLFNIAYWVYHI 648
>gi|334311447|ref|XP_001380372.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Monodelphis
domestica]
Length = 441
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY + L + D +E E+ NI I
Sbjct: 313 ICFSFVFGALLEYAVAHY------SSLQKLAAKDR-----------GTSKEVEEVNITNI 355
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D ++ ++ + ++K++ ++ R F I + S
Sbjct: 356 -INSSISSFKRKISFASIEISSDNVNYSDLTMKTSDKFKFVFRDKMGRIVDYFTIQNPSN 414
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D S++LFP F L+N+FYW Y+
Sbjct: 415 VDHYSKLLFPLIFMLVNVFYWAFYL 439
>gi|260798384|ref|XP_002594180.1| hypothetical protein BRAFLDRAFT_117616 [Branchiostoma floridae]
gi|229279413|gb|EEN50191.1| hypothetical protein BRAFLDRAFT_117616 [Branchiostoma floridae]
Length = 486
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 47/159 (29%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
Y ++EFAA H+F++ + E ++K K +
Sbjct: 364 YVFTALVEFAAAHHFSR-------------------------RKQESQISNQMYKNKDAF 398
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSR-----------EGYQF 113
+ + LKV P +E ++V + K +KK Q+V E +
Sbjct: 399 QTNGI-----LKVHP------FQNEKDVVTDGKDKKKENQDVEEDFDEDVAQAMAESDER 447
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFV 152
+KID +S+I FPA+F L N+ YW Y+ E V
Sbjct: 448 GQMIAAKIDLMSKIFFPATFILFNIIYWAVYMGSYEGKV 486
>gi|308465846|ref|XP_003095180.1| CRE-LGC-52 protein [Caenorhabditis remanei]
gi|308246036|gb|EFO89988.1| CRE-LGC-52 protein [Caenorhabditis remanei]
Length = 467
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
+ IDRV+ +LFP F L NL YW Y+T N V+
Sbjct: 432 ASIDRVASMLFPTMFALFNLVYWSYYLTTSMNPVY 466
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R Y I+ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 381 REGETLRRRY---IDRAKRIDTISRAVFPFTFLVFNIFYWVVY 420
>gi|308511531|ref|XP_003117948.1| CRE-GGR-2 protein [Caenorhabditis remanei]
gi|308238594|gb|EFO82546.1| CRE-GGR-2 protein [Caenorhabditis remanei]
Length = 535
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 91 NLVANEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
N N+ RKK + + + Q H N KID+ SR +FP +F + NL YWI Y+
Sbjct: 472 NRKCNDSSRKKEKWSSAIKQIQKHKKIAGRNRAKKIDQTSRWIFPLTFVIFNLTYWIYYL 531
>gi|449483363|ref|XP_002194694.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Taeniopygia guttata]
Length = 443
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 412 LTDVNAIDRWSRMVFPFTFSLFNLIYWLYYV 442
>gi|449275751|gb|EMC84519.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Columba
livia]
Length = 422
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 391 LTDVNAIDRWSRMVFPFTFSLFNLIYWLYYV 421
>gi|444520572|gb|ELV13027.1| Glycine receptor subunit alpha-4 [Tupaia chinensis]
Length = 452
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 401 REGETMRKVY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 440
>gi|344265257|ref|XP_003404701.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Loxodonta africana]
Length = 440
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 28/150 (18%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TN+
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTAKEVEEVNITNVIN- 356
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVN-----LVANEKYRKKREQEVSREGYQFHI 115
S+ + NI ++S+D+VN + ++K++ ++ + F I
Sbjct: 357 ------SSISSFKRKISFANI--EISSDKVNYSDLTMKTSDKFKFVFRDKMGKIIDCFTI 408
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ S +DR S++LFP F L N+FYW Y+
Sbjct: 409 QNPSNVDRYSKLLFPLIFMLANVFYWAYYL 438
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I+ +ID VSR+ FP F + N+FYWI Y
Sbjct: 458 EMKKLFISRAKRIDTVSRVAFPLVFLIFNIFYWIIY 493
>gi|46048684|ref|NP_990677.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Gallus
gallus]
gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|62893|emb|CAA38147.1| precursor peptide [Gallus gallus]
Length = 476
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SR++FP +F L NL YW+ Y+
Sbjct: 445 LTDVNAIDRWSRMVFPFTFSLFNLIYWLYYV 475
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+E E+ R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 406 KEGEIMRKLY---VDRAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 46/178 (25%)
Query: 1 MSFFYCIATILEFAAVHYFT-------------------------------KTGSGEIPF 29
M F + A +LE+AAV+Y + + SG
Sbjct: 271 MCFLFVFAALLEYAAVNYHSSVRQRREQKALKAKQAGLEDSRLSLSADPRVRKLSGMGMA 330
Query: 30 LVSSDEIRVHPHPKSYVSED---EEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLS 86
++++ +++ + ++ +E + EQT++ K V + + I ++
Sbjct: 331 VLNAAKLQKEANDRAAATEGGRGRQREQTDVRKRPVSFATLG-------QKVMKIQEEGR 383
Query: 87 TDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
D L E Q V + + V+ ID+ SR++FP F L + YW+SY
Sbjct: 384 QDRKRLTIAEVV-----QRVKTSNIKLQVKDVNTIDKYSRVVFPGVFFLFCVMYWVSY 436
>gi|432880947|ref|XP_004073729.1| PREDICTED: glycine receptor subunit alphaZ1-like, partial [Oryzias
latipes]
Length = 258
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I +ID VSR+ FP F + N+FYWI+Y
Sbjct: 212 EMKKLFIGRAKRIDTVSRVAFPLVFLIFNIFYWITY 247
>gi|260835128|ref|XP_002612561.1| hypothetical protein BRAFLDRAFT_78821 [Branchiostoma floridae]
gi|229297939|gb|EEN68570.1| hypothetical protein BRAFLDRAFT_78821 [Branchiostoma floridae]
Length = 105
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQ 148
+KID+ +RILFP +F + NL YW+ D+
Sbjct: 35 AKIDKAARILFPTAFIIFNLVYWLCVFVDR 64
>gi|198456240|ref|XP_002136347.1| GA22552 [Drosophila pseudoobscura pseudoobscura]
gi|198142702|gb|EDY71425.1| GA22552 [Drosophila pseudoobscura pseudoobscura]
Length = 291
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 37/178 (20%)
Query: 1 MSFFYCIATILEFAAVHY--FTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH 58
M F + A +LE+AAV+Y + K +I L D ++ +S ED I
Sbjct: 120 MCFVFVFAALLEYAAVNYTYWGKRAKKKIKKLKDCDRQKIGKSERSVTCSTTED----II 175
Query: 59 KIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLV--------------ANEKYRKKREQ 104
+++ D R+ + +R I + T+ +NL A + R + ++
Sbjct: 176 ELQ-DVRMSPIPSLRKSNYNATI-GSIGTETLNLTKFPPSFRITRNYGTARNQLRHRSQR 233
Query: 105 EVSREGYQFH---------------INSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
+S H I V+ ID+ SR++FP SF NL YW+ YI +
Sbjct: 234 GISTRPRMLHALKKSASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE 291
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I+ +ID VSR+ FP F + N+FYWI+Y
Sbjct: 413 EMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 448
>gi|403273149|ref|XP_003928384.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Saimiri
boliviensis boliviensis]
Length = 467
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S + +++E+AAV+Y T +G+I + + + ++ Y + + +
Sbjct: 336 VSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNINAVQAMAFDGCYHDTEIDMD 395
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ +R +C + STD R KR + + +
Sbjct: 396 QTSLSLNSEDF-------MRRKSIC-----RPSTDSS--------RIKRRKSLGGHVGRI 435
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 436 ILENNHVIDTYSRILFPIVYILFNLFYWGIYV 467
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + IN KID +SR FP +F + N+FYW+ Y
Sbjct: 426 EMRKVFINRAKKIDTISRACFPLAFLIFNIFYWVIY 461
>gi|345324534|ref|XP_003430829.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Ornithorhynchus anatinus]
Length = 602
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ + ++D SR+ FP SF L NL YW+ Y+
Sbjct: 565 RKG-RVHID-ILELDSYSRVFFPTSFLLFNLVYWVGYL 600
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I+ +ID VSR+ FP F + N+FYWI+Y
Sbjct: 398 EMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 433
>gi|340727433|ref|XP_003402048.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus terrestris]
Length = 489
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
I V+ ID+ SRI+FP SF L N YW+ Y
Sbjct: 458 IKDVNIIDKYSRIIFPVSFMLFNAIYWVFY 487
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRT----LKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
++VD + S EIR +V + D +T A+ +YRK SREGY
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTGVGDPKATMYSYDSASIQYRKPMS---SREGYG 415
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 416 RALDRHGAHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +K+ + + R Q +N V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 470 ALERHAQKKSR-LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYV 525
>gi|260835282|ref|XP_002612638.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
gi|229298016|gb|EEN68647.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
Length = 390
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEED--EQTNIHKI 60
+ A ++EFAAV++ ++ D+ R ++ +ED ++T +H +
Sbjct: 269 LLFVFAALIEFAAVNFMSRQDKNR-------DDRRRKEKEEADKNEDYATLRQRTWLHHV 321
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
K + + P+ +D + +EK ++ RE ++ ++
Sbjct: 322 K---------NVSLKEEVPSSLD---------IKSEKCSSQQRPPPERERNKY-MDRAKN 362
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+DR+SR LFP F L NL YW +Y+
Sbjct: 363 LDRLSRGLFPLGFFLFNLMYWNAYL 387
>gi|47214122|emb|CAG01380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 450
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ IDR SRI+FP +F L N+ YW+ Y+
Sbjct: 419 LTDVNAIDRWSRIIFPFTFSLFNVIYWLYYV 449
>gi|390179631|ref|XP_003736946.1| GA20421, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388859928|gb|EIM53019.1| GA20421, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 422
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 283 FVFGALLEFALVNYASRSGS---------NKSNMHKENMKKKRRDLEQASLDAASDLLDT 333
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 334 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 391
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 392 DVISRITFPLVFALFNLVYWSTYLFREE 419
>gi|410926671|ref|XP_003976801.1| PREDICTED: glycine receptor subunit alphaZ1-like, partial [Takifugu
rubripes]
Length = 214
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 109 EGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
E + I+ +ID VSR+ FP F + N+FYWI+Y
Sbjct: 168 EMKKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 203
>gi|339233184|ref|XP_003381709.1| neurotransmitter-gated ion-channel transmembrane region family
protein [Trichinella spiralis]
gi|316979444|gb|EFV62237.1| neurotransmitter-gated ion-channel transmembrane region family
protein [Trichinella spiralis]
Length = 592
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE------------IPFLVSSDEI--RVHPHPKSYVSE 48
F A+++E+AAV Y K + +P +SS I P S+VS
Sbjct: 150 FVMVFASLIEYAAVSYLNKKVKMKQERRKQQQTVQHMPPPLSSSGILSSADPMMASFVSS 209
Query: 49 DEEDEQ-----TNIHKIKVDYRVCSVYEIRTLKVCPNI-VDQLSTD-EVNLVANEKYRKK 101
T+ K + YR + + P++ + QL D ++N + R
Sbjct: 210 GSAPRSSYYPYTSSAKNRAQYRP-NAKRFANADMSPSLSMSQLECDCDMNQIRPVPMRIV 268
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ R + H + S ID+ SRI+FP F N YWISY
Sbjct: 269 SRPKLRR--HMLHHVTPSSIDKYSRIMFPLFFLFFNAVYWISY 309
>gi|297673422|ref|XP_002814764.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pongo abelii]
gi|397490149|ref|XP_003816070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan paniscus]
Length = 404
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 244 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 288
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 289 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 348
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 349 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 403
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRT----LKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
++VD + S EIR +V + D +T A+ +YRK SREGY
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTGVGDPKTTMYSYDSASIQYRKPMS---SREGYG 415
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 416 RALDRHGAHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|115532178|ref|NP_001024472.2| Protein GGR-2, isoform a [Caenorhabditis elegans]
gi|351049758|emb|CCD63812.1| Protein GGR-2, isoform a [Caenorhabditis elegans]
Length = 546
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 91 NLVANEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
N N+ RKK + + + Q H N KID+ SR +FP +F + NL YWI Y+
Sbjct: 483 NRKCNDSSRKKEKWSSAIKQIQKHKKIAGRNRAKKIDQTSRWIFPLTFIIFNLTYWIYYL 542
>gi|350423047|ref|XP_003493368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 489
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
I V+ ID+ SRI+FP SF L N YW+ Y
Sbjct: 458 IKDVNIIDKYSRIIFPVSFMLFNAIYWVFY 487
>gi|348538138|ref|XP_003456549.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 632
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 107 SREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
+ E + I+ KID VSR FP +F N+FYW+ Y
Sbjct: 584 TEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLY 621
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|426344254|ref|XP_004038689.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Gorilla
gorilla gorilla]
Length = 404
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 244 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 288
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 289 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 348
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 349 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 403
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|410906147|ref|XP_003966553.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Takifugu rubripes]
Length = 450
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + H+N + ++D SR+ FP SF L N+ YW+SY+
Sbjct: 413 RRG-RVHVN-IRELDSYSRVFFPTSFLLFNIVYWVSYL 448
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRTL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|344252912|gb|EGW09016.1| Gamma-aminobutyric acid receptor subunit beta-1 [Cricetulus
griseus]
Length = 343
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 183 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 227
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK SREG+
Sbjct: 228 VQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLS---SREGFG 284
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 285 RGLDRHGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 342
>gi|194374465|dbj|BAG57128.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 244 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 288
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 289 VQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 348
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 349 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 403
>gi|15020803|emb|CAC44625.1| glycine receptor alpha-2 [Takifugu rubripes]
Length = 96
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYW++Y
Sbjct: 55 VDRAKRIDTISRAVFPLSFLIFNIFYWVTY 84
>gi|348535498|ref|XP_003455237.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 555
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +K+ + + R Q +N V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 499 ALERHAQKKSR-LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYV 554
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +K+ + + R Q +N V+ ID+ SR++FP F N+ YW+ Y+
Sbjct: 470 ALERHAQKKSR-LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYV 525
>gi|357614640|gb|EHJ69188.1| histamine-gated chloride channel [Danaus plexippus]
Length = 208
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 90 VNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
VN++ +++ K +E E + + +VS IDR SR+ FP F +LN YWI +
Sbjct: 154 VNIILDDRGGKPKEPA---EAAKARMRAVS-IDRFSRVFFPLLFAVLNATYWIQF 204
>gi|351706784|gb|EHB09703.1| Glycine receptor subunit alpha-2 [Heterocephalus glaber]
Length = 94
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR FP +F + N+FYWI+Y
Sbjct: 54 VDRAKRIDTISRAAFPLAFLIFNIFYWITY 83
>gi|125778576|ref|XP_001360046.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54639797|gb|EAL29199.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 317 FVFGALLEFALVNYASRSGS---------NKSNMHKENMKKKRRDLEQASLDAASDLLDT 367
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 368 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 425
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 426 DVISRITFPLVFALFNLVYWSTYLFREE 453
>gi|410914016|ref|XP_003970484.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Takifugu rubripes]
Length = 409
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQ 148
+ S ID+ +RILFP +F L NL YW Y++ +
Sbjct: 363 QLAGTSPIDKYARILFPMTFALFNLAYWYIYLSKE 397
>gi|431909786|gb|ELK12932.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 107
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR FP +F + N+FYWI+Y
Sbjct: 67 VDRAKRIDTISRAAFPLAFLIFNIFYWITY 96
>gi|440908382|gb|ELR58403.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Bos
grunniens mutus]
Length = 321
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 161 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 205
Query: 60 IKVDYR---VCSVYEIRT----LKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQ 112
++VD + S EIR +V + D +T A+ +YRK SREGY
Sbjct: 206 VQVDAHGNILLSTLEIRNETSGSEVLTGVGDPKTTMYSYDSASIQYRKPMS---SREGYG 262
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 263 RALDRHGAHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 320
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK SREG+
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLS---SREGFG 415
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 416 RGLDRHGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|391329925|ref|XP_003739417.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 556
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 117 SVSKIDRVSRILFPASFGLLNLFYWISYI 145
S S IDR SR++FP F NL YWI Y+
Sbjct: 510 SPSDIDRYSRVVFPVCFVCFNLMYWIIYL 538
>gi|195158090|ref|XP_002019927.1| GL12670 [Drosophila persimilis]
gi|194116518|gb|EDW38561.1| GL12670 [Drosophila persimilis]
Length = 458
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 5 YCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIKVDY 64
+ +LEFA V+Y +++GS ++ +H D E + +D
Sbjct: 319 FVFGALLEFALVNYASRSGS---------NKSNMHKENMKKKRRDLEQASLDAASDLLDT 369
Query: 65 RVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK---I 121
+ + ++ L P D L+ ++ KR +F S+ I
Sbjct: 370 DSNATFAMKPLVRHPG--DPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRI 427
Query: 122 DRVSRILFPASFGLLNLFYWISYITDQE 149
D +SRI FP F L NL YW +Y+ +E
Sbjct: 428 DVISRITFPLVFALFNLVYWSTYLFREE 455
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNRLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK SREG+
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLS---SREGFG 415
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 416 RGLDRHGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|358332910|dbj|GAA51498.1| glycine receptor subunit alpha-2 [Clonorchis sinensis]
Length = 554
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYI 145
S+IDR SR LFPA + L N FYW+ Y+
Sbjct: 523 SEIDRYSRFLFPACYLLYNCFYWLYYL 549
>gi|148705865|gb|EDL37812.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_a [Mus musculus]
Length = 473
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 53/178 (29%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 313 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNRLEMNK 357
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKREQEVSREGYQ 112
++VD + S EIR ++ +S + + A+ +YRK SREG+
Sbjct: 358 VQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLS---SREGFG 414
Query: 113 FHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 415 RGLDRHGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 472
>gi|402869296|ref|XP_003898699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Papio
anubis]
Length = 331
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 171 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 215
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 216 VQVDAHGNILLSTLEIRNETGGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRTL 275
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 276 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 330
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 54/179 (30%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV-----ANEKYRKKREQEVSREGY 111
++VD + S EIR ++ +S + + A+ +YRK SREGY
Sbjct: 359 VQVDAHGNILLSTLEIRNETSGSEVLTGVSEPKATSMYSYDSASIQYRKPLS---SREGY 415
Query: 112 QFHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 416 GRALDRHGAHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 474
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETGGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 108 REGYQFH---INSVSKIDRVSRILFPASFGLLNLFYWISY 144
REG H ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 384 REGETLHKRYVDRAKRIDTISRAVFPFTFLVFNIFYWVVY 423
>gi|391325188|ref|XP_003737121.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 563
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 113 FHINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPTISH 161
F +N S ID+ SR++FP F NL YW+ Y+ + V + PTI H
Sbjct: 518 FGVNP-SNIDKYSRVVFPVCFVCFNLTYWVIYLKISD--VQYEEPTILH 563
>gi|149759465|ref|XP_001497075.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Equus
caballus]
Length = 632
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 109 EGYQ---FHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ FH + V K+D+ SRILFP +F + N+ YW +I
Sbjct: 592 EGFSSKLFHPDYVPKVDKWSRILFPLAFVVFNIVYWAYHI 631
>gi|339233056|ref|XP_003381645.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
gi|316979509|gb|EFV62301.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
Length = 745
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE------------IPFLVSSDEI--RVHPHPKSYVSE 48
F A+++E+AAV Y K + +P +SS I P S+VS
Sbjct: 277 FVMVFASLIEYAAVSYLNKKVKMKQERRKQQQTVQHMPPPLSSSGILSSADPMMASFVSS 336
Query: 49 DEEDEQ-----TNIHKIKVDYRVCSVYEIRTLKVCPNI-VDQLSTD-EVNLVANEKYRKK 101
T+ K + YR + + P++ + QL D ++N + R
Sbjct: 337 GSAPRSSYYPYTSSAKNRAQYRP-NAKRFANADMSPSLSMSQLECDCDMNQIRPVPMRIV 395
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ R + H + S ID+ SRI+FP F N YWISY
Sbjct: 396 SRPKLRR--HMLHHVTPSSIDKYSRIMFPLFFLFFNAVYWISY 436
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYWI+Y
Sbjct: 416 VDRAKRIDTISRAVFPLSFLIFNVFYWITY 445
>gi|195479056|ref|XP_002100749.1| GE17238 [Drosophila yakuba]
gi|194188273|gb|EDX01857.1| GE17238 [Drosophila yakuba]
Length = 496
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F + A +LE+AAV+Y T G+ P K SE E T I
Sbjct: 325 MCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKECCPG-KIGKSERSETCSTTEDII 380
Query: 61 KV-DYRVCSVYEIRTLKVCPNIVDQLSTDEVNL--------------VANEKYRKKREQE 105
++ D R+ + +R +D + T+ +NL + + R++ ++
Sbjct: 381 ELQDVRMSPIPSLRR-GTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRG 439
Query: 106 VSREGYQFH---------------INSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
+S H I V+ ID+ SR++FP SF NL YW+ YI +
Sbjct: 440 ISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE 496
>gi|189092755|gb|ACD75818.1| gamma-aminobutyric acid A receptor gamma 2 [Felis catus]
Length = 453
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 112 QFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ HI + K+D +RI FP +F L NL YW+SY+
Sbjct: 419 RIHIR-IPKMDSYARIFFPTAFCLFNLVYWVSYL 451
>gi|345779693|ref|XP_003431881.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Canis
lupus familiaris]
Length = 663
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 632 LTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 662
>gi|67969084|dbj|BAE00897.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 1 MSFFYCIATILEFAAVHYFTKT-------GSGEIPFLVSSDEIRVHPHPKSYVSEDEEDE 53
+S F+ +++E+AAV+Y T +G+I + + D ++ Y + + +
Sbjct: 56 VSSFFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDAVQAMAFDGCYHDSEIDMD 115
Query: 54 QTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQF 113
QT++ D+ IR+ P STD + K RK V R
Sbjct: 116 QTSLSLNSEDF--MRRKSIRS----P------STDSTWI----KRRKSLGGHVGR----I 155
Query: 114 HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + ID SRILFP + L NLFYW Y+
Sbjct: 156 ILENNHVIDTYSRILFPVVYILFNLFYWGVYV 187
>gi|344298013|ref|XP_003420689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Loxodonta africana]
Length = 466
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R+G + HI+ V ++D SR+ FP SF L NL YWI Y+
Sbjct: 429 RKG-RVHID-VLELDSYSRVFFPTSFLLFNLVYWIGYL 464
>gi|195044266|ref|XP_001991787.1| GH11877 [Drosophila grimshawi]
gi|193901545|gb|EDW00412.1| GH11877 [Drosophila grimshawi]
Length = 497
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
I V+ ID+ SR++FP SF NL YWI YI +
Sbjct: 465 IKDVNIIDKYSRMIFPISFCAFNLGYWIFYILE 497
>gi|432109372|gb|ELK33630.1| Gamma-aminobutyric acid receptor subunit beta-1 [Myotis davidii]
Length = 594
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 46/174 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +++ N ++K
Sbjct: 435 FVFVFLALLEYAFVNYIF-FGKG--------------PRKKGAGKQNQSANDKNKLEMNK 479
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRKKR---------- 102
++VD + S EIR ++ +S + A+ YRK R
Sbjct: 480 VQVDTHGNIILSTLEIRNETSGSEVLTGMSDPNTTMYSYDSASIHYRKPRATREAPGHPL 539
Query: 103 ------EQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ + R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 540 DRHAHGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 593
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
RE E+ R Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 420 REGELLRRRY---LDRAKRIDTISRAVFPFTFLVFNIFYWLVY 459
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 101 KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
++E E R+ Y ++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 364 RKEGETMRKLY---VDRAKRIDTISRAVFPFTFLVFNIFYWVVY 404
>gi|344256890|gb|EGW12994.1| Glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 455
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 101 KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
++E E R + +++ +ID +SR +FP +F + N+FYW+ Y
Sbjct: 403 RKEGETMR---KLYVDRAKRIDTISRAVFPFTFLVFNIFYWVVY 443
>gi|242014668|ref|XP_002428007.1| Acetylcholine receptor protein subunit delta precursor, putative
[Pediculus humanus corporis]
gi|212512526|gb|EEB15269.1| Acetylcholine receptor protein subunit delta precursor, putative
[Pediculus humanus corporis]
Length = 487
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 20/33 (60%), Gaps = 8/33 (24%)
Query: 121 IDRVSRILFPASFGLLNLFYWISYITDQENFVW 153
IDR SRILFPASF + N FYW FVW
Sbjct: 462 IDRRSRILFPASFFIFNAFYW--------GFVW 486
>gi|7657106|ref|NP_055026.1| gamma-aminobutyric acid receptor subunit pi precursor [Homo
sapiens]
gi|6016089|sp|O00591.1|GBRP_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197001|gb|AAC51357.1| GABA-A receptor pi subunit [Homo sapiens]
gi|3252852|gb|AAC24194.1| GABA-A receptor pi subunit [Homo sapiens]
gi|50959884|gb|AAH74810.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|50960321|gb|AAH74865.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|119581871|gb|EAW61467.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|119581872|gb|EAW61468.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|158259263|dbj|BAF85590.1| unnamed protein product [Homo sapiens]
Length = 440
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVSITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D S++LFP F L N+FYW Y+
Sbjct: 414 VDHYSKLLFPLIFMLANVFYWAYYM 438
>gi|194894090|ref|XP_001978006.1| GG17931 [Drosophila erecta]
gi|195555119|ref|XP_002077031.1| GD24824 [Drosophila simulans]
gi|304726|gb|AAA28559.1| GABA receptor beta subunit [Drosophila melanogaster]
gi|386138|gb|AAB27090.1| putative gamma-aminobutyric acid receptor beta subunit [Drosophila
melanogaster]
gi|190649655|gb|EDV46933.1| GG17931 [Drosophila erecta]
gi|194203049|gb|EDX16625.1| GD24824 [Drosophila simulans]
Length = 496
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F + A +LE+AAV+Y T G+ P K SE E T I
Sbjct: 325 MCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKECCPG-KIGKSERSETCSTTEDII 380
Query: 61 KV-DYRVCSVYEIRTLKVCPNIVDQLSTDEVNL--------------VANEKYRKKREQE 105
++ D R+ + +R +D + T+ +NL + + R++ ++
Sbjct: 381 ELQDVRMSPIPSLRR-GTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRG 439
Query: 106 VSREGYQFH---------------INSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
+S H I V+ ID+ SR++FP SF NL YW+ YI +
Sbjct: 440 ISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE 496
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYW++Y
Sbjct: 414 VDRAKRIDTISRAVFPLSFLIFNIFYWVTY 443
>gi|403284708|ref|XP_003933700.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Saimiri boliviensis boliviensis]
Length = 404
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 244 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 288
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 289 VQVDAHGNILLSTLEIRNETGGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 348
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 349 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 403
>gi|332248250|ref|XP_003273278.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Nomascus
leucogenys]
Length = 440
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVSITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D S++LFP F L N+FYW Y+
Sbjct: 414 VDHYSKLLFPLIFMLANVFYWAYYM 438
>gi|332822676|ref|XP_001150902.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 1
[Pan troglodytes]
gi|397479327|ref|XP_003810975.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Pan
paniscus]
gi|426350963|ref|XP_004043030.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Gorilla
gorilla gorilla]
Length = 440
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
+ F + +LE+A HY S ++ + E EE TNI
Sbjct: 312 ICFSFVFGALLEYAVAHY--------------SSLQQMAAKDRGTTKEVEEVSITNI--- 354
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
++ + S + D + ++ + ++K++ +++ R F I + S
Sbjct: 355 -INSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRIVDYFTIQNPSN 413
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D S++LFP F L N+FYW Y+
Sbjct: 414 VDHYSKLLFPLIFMLANVFYWAYYM 438
>gi|45555535|ref|NP_996469.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|14286135|sp|Q08832.2|GBRB3_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta-like;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|16767980|gb|AAL28208.1| GH08705p [Drosophila melanogaster]
gi|45446997|gb|AAS65370.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|220956304|gb|ACL90695.1| Lcch3-PA [synthetic construct]
Length = 496
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI 60
M F + A +LE+AAV+Y T G+ P K SE E T I
Sbjct: 325 MCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKECCPG-KIGKSERSETCSTTEDII 380
Query: 61 KV-DYRVCSVYEIRTLKVCPNIVDQLSTDEVNL--------------VANEKYRKKREQE 105
++ D R+ + +R +D + T+ +NL + + R++ ++
Sbjct: 381 ELQDVRMSPIPSLRR-GTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRG 439
Query: 106 VSREGYQFH---------------INSVSKIDRVSRILFPASFGLLNLFYWISYITD 147
+S H I V+ ID+ SR++FP SF NL YW+ YI +
Sbjct: 440 ISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE 496
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 314 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGAGKQDQSANEKNKLEMNK 358
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV----ANEKYRK---KREQ----- 104
++VD + S EIR ++ +S + + A+ +YRK RE
Sbjct: 359 VQVDAHGNILLSTLEIRNETGGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRAL 418
Query: 105 ---------EVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ R Q + V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 419 DRHGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
>gi|307189537|gb|EFN73914.1| Gamma-aminobutyric acid receptor subunit beta-like [Camponotus
floridanus]
Length = 404
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
I V+ ID+ SRI+FP SF L N YWI Y
Sbjct: 373 IKDVNMIDKYSRIIFPVSFMLFNFVYWIFY 402
>gi|281338652|gb|EFB14236.1| hypothetical protein PANDA_005229 [Ailuropoda melanoleuca]
Length = 322
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 54/179 (30%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTN---IHK 59
F + +LE+A V+Y G G P K +D+ + N ++K
Sbjct: 161 FVFVFLALLEYAFVNYIF-FGKG--------------PQKKGASKQDQSANEKNKLEMNK 205
Query: 60 IKVDYR---VCSVYEIRTLKVCPNIVDQLSTDEVNLV-----ANEKYRKKREQEVSREGY 111
++VD + S EIR ++ +S + + A+ +YRK SREGY
Sbjct: 206 VQVDAHGNILLSTLEIRNETSGSEVLTGVSEPKATSMYSYDSASIQYRKPLS---SREGY 262
Query: 112 QFHIN-------------------------SVSKIDRVSRILFPASFGLLNLFYWISYI 145
++ V+ ID+ SR+ FP +F L N+ YW+ Y+
Sbjct: 263 GRALDRHGAHSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 321
>gi|268579645|ref|XP_002644805.1| C. briggsae CBR-GGR-2 protein [Caenorhabditis briggsae]
Length = 499
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 95 NEKYRKKREQEVSREGYQFHI-----NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NE RKK + + + Q H N KID+ SR +FP +F + NL YWI Y+
Sbjct: 440 NESSRKKDKWSSAIKQIQKHKEIAGRNRAKKIDQSSRWIFPLTFIIFNLTYWIYYL 495
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYWI+Y
Sbjct: 415 VDRAKRIDTISRAVFPLSFLIFNVFYWITY 444
>gi|260789568|ref|XP_002589818.1| hypothetical protein BRAFLDRAFT_90506 [Branchiostoma floridae]
gi|229275001|gb|EEN45829.1| hypothetical protein BRAFLDRAFT_90506 [Branchiostoma floridae]
Length = 1628
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQEN 150
+KID +R++FP +F +L+ YW++Y + EN
Sbjct: 1247 TKIDSFARVIFPVAFVILSAAYWVTYRANMEN 1278
>gi|47227000|emb|CAG05892.1| unnamed protein product [Tetraodon nigroviridis]
Length = 525
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 102 REQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISY 144
R+ + R+ + ++ +ID +SR FP +F + N+FYW++Y
Sbjct: 475 RDMDTMRKKF---VDRAKRIDTISRAAFPLAFLIFNVFYWVTY 514
>gi|391330514|ref|XP_003739705.1| PREDICTED: glycine receptor subunit alpha-3-like [Metaseiulus
occidentalis]
Length = 439
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 13/57 (22%)
Query: 89 EVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
E+ ANE RK RE V+R +DRVSR+ FP +FG+ N YW Y+
Sbjct: 395 EILASANEDERKFRE--VARS-----------VDRVSRLGFPVAFGIFNSLYWSYYM 438
>gi|118150482|ref|NP_001071280.1| ligand-gated chloride channel homolog 3 precursor [Apis mellifera]
gi|110555512|gb|ABG75736.1| GABA-gated ion channel [Apis mellifera]
Length = 489
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYI 145
I V+ ID+ SRI+FP SF L N YWI Y+
Sbjct: 458 IKDVNIIDKYSRIIFPVSFMLFNAIYWIFYV 488
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISY 144
++ +ID +SR +FP SF + N+FYW++Y
Sbjct: 413 VDRAKRIDTISRAVFPLSFLIFNIFYWVTY 442
>gi|321478374|gb|EFX89331.1| hypothetical protein DAPPUDRAFT_310319 [Daphnia pulex]
Length = 540
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 94 ANEKYRKKREQEVSREGYQF--------HINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
A + KR S G + I V+ ID+ SRI+FPA+F + N+ YW YI
Sbjct: 479 AGHRSDNKRSASQSANGSRLLCGIYSLPKIKDVNLIDKYSRIVFPAAFAIFNVVYWSIYI 538
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,576,340,135
Number of Sequences: 23463169
Number of extensions: 96634123
Number of successful extensions: 242056
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 240039
Number of HSP's gapped (non-prelim): 1991
length of query: 161
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 38
effective length of database: 9,473,225,580
effective search space: 359982572040
effective search space used: 359982572040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)