Your job contains 1 sequence.
>psy12319
MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKI
KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK
IDRVSRILFPASFGLLNLFYWISYITDQENFVWKDPPTISH
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12319
(161 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030707 - symbol:CG8916 species:7227 "Drosophila m... 143 1.1e-19 2
FB|FBgn0001134 - symbol:Grd "Glycine receptor" species:72... 129 1.2e-15 2
UNIPROTKB|F1NXA6 - symbol:GABRA2 "Uncharacterized protein... 129 2.7e-11 2
UNIPROTKB|I3L720 - symbol:GABRA2 "Uncharacterized protein... 122 7.5e-11 2
UNIPROTKB|F1PEH3 - symbol:GABRA2 "Uncharacterized protein... 122 1.4e-10 2
UNIPROTKB|P10063 - symbol:GABRA2 "Gamma-aminobutyric acid... 122 1.5e-10 2
UNIPROTKB|P47869 - symbol:GABRA2 "Gamma-aminobutyric acid... 122 1.5e-10 2
MGI|MGI:95614 - symbol:Gabra2 "gamma-aminobutyric acid (G... 122 1.5e-10 2
RGD|61856 - symbol:Gabra2 "gamma-aminobutyric acid (GABA)... 122 1.5e-10 2
UNIPROTKB|F1LNE8 - symbol:Gabra2 "Gamma-aminobutyric acid... 122 1.5e-10 2
UNIPROTKB|F1LMU7 - symbol:Gabra2 "Gamma-aminobutyric acid... 122 1.5e-10 2
UNIPROTKB|B7Z1H8 - symbol:GABRA2 "Gamma-aminobutyric acid... 122 1.5e-10 2
UNIPROTKB|E9PBQ7 - symbol:GABRA2 "Gamma-aminobutyric acid... 122 2.1e-10 2
RGD|61859 - symbol:Gabra5 "gamma-aminobutyric acid (GABA)... 118 4.3e-10 2
UNIPROTKB|E2RG38 - symbol:GABRA5 "Uncharacterized protein... 117 2.1e-09 2
UNIPROTKB|F1SR89 - symbol:GABRA5 "Uncharacterized protein... 113 6.4e-08 2
UNIPROTKB|P19150 - symbol:GABRA1 "Gamma-aminobutyric acid... 111 2.0e-07 2
MGI|MGI:95613 - symbol:Gabra1 "gamma-aminobutyric acid (G... 111 2.0e-07 2
RGD|61855 - symbol:Gabra1 "gamma-aminobutyric acid (GABA)... 111 2.0e-07 2
UNIPROTKB|P08219 - symbol:GABRA1 "Gamma-aminobutyric acid... 111 2.0e-07 2
UNIPROTKB|E2RSP8 - symbol:GABRA1 "Uncharacterized protein... 111 2.0e-07 2
UNIPROTKB|P14867 - symbol:GABRA1 "Gamma-aminobutyric acid... 111 2.0e-07 2
UNIPROTKB|F1RR71 - symbol:LOC100516706 "Uncharacterized p... 111 2.0e-07 2
UNIPROTKB|P31644 - symbol:GABRA5 "Gamma-aminobutyric acid... 110 3.2e-07 2
MGI|MGI:95617 - symbol:Gabra5 "gamma-aminobutyric acid (G... 110 3.2e-07 2
MGI|MGI:95615 - symbol:Gabra3 "gamma-aminobutyric acid (G... 122 8.5e-07 1
RGD|2648 - symbol:Gabra3 "gamma-aminobutyric acid (GABA) ... 122 8.5e-07 1
UNIPROTKB|P20236 - symbol:Gabra3 "Gamma-aminobutyric acid... 122 8.5e-07 1
UNIPROTKB|E1BW42 - symbol:GABRA5 "Uncharacterized protein... 110 1.1e-06 2
UNIPROTKB|P34903 - symbol:GABRA3 "Gamma-aminobutyric acid... 121 1.1e-06 1
ZFIN|ZDB-GENE-061013-194 - symbol:gabra1 "gamma-aminobuty... 107 1.2e-06 2
UNIPROTKB|Q08E50 - symbol:GABRA5 "Gamma-aminobutyric acid... 107 1.2e-06 2
UNIPROTKB|E2QVJ7 - symbol:GABRA3 "Uncharacterized protein... 119 1.8e-06 1
UNIPROTKB|Q7LZ70 - symbol:GABRG1 "Uncharacterized protein... 105 2.3e-06 2
MGI|MGI:103156 - symbol:Gabrg1 "gamma-aminobutyric acid (... 104 2.8e-06 2
RGD|621732 - symbol:Gabrg1 "gamma-aminobutyric acid (GABA... 104 2.8e-06 2
ZFIN|ZDB-GENE-081104-30 - symbol:gabra5 "gamma-aminobutyr... 108 3.2e-06 2
UNIPROTKB|Q8N1C3 - symbol:GABRG1 "Gamma-aminobutyric acid... 104 4.5e-06 2
UNIPROTKB|E2RH22 - symbol:GABRG1 "Uncharacterized protein... 104 4.6e-06 2
UNIPROTKB|F1NAX6 - symbol:GABRA3 "Uncharacterized protein... 117 5.0e-06 1
UNIPROTKB|F1MCS2 - symbol:GABRA3 "Gamma-aminobutyric acid... 117 5.9e-06 1
UNIPROTKB|P10064 - symbol:GABRA3 "Gamma-aminobutyric acid... 117 5.9e-06 1
ZFIN|ZDB-GENE-080815-1 - symbol:gabra6b "gamma-aminobutyr... 106 9.2e-06 2
UNIPROTKB|F1S3S9 - symbol:GABRG1 "Uncharacterized protein... 104 1.3e-05 2
MGI|MGI:2387597 - symbol:Gabrp "gamma-aminobutyric acid (... 110 1.5e-05 2
ZFIN|ZDB-GENE-050417-360 - symbol:zgc:110204 "zgc:110204"... 101 4.3e-05 2
RGD|620532 - symbol:Gabrp "gamma-aminobutyric acid (GABA-... 106 9.4e-05 2
UNIPROTKB|O09028 - symbol:Gabrp "Gamma-aminobutyric acid ... 106 9.4e-05 2
MGI|MGI:1888498 - symbol:Gabrq "gamma-aminobutyric acid (... 107 9.7e-05 2
UNIPROTKB|P20237 - symbol:GABRA4 "Gamma-aminobutyric acid... 96 0.00014 2
UNIPROTKB|Q90845 - symbol:GABRA6 "Gamma-aminobutyric acid... 96 0.00014 2
UNIPROTKB|F1P9P9 - symbol:GABRA4 "Uncharacterized protein... 96 0.00014 2
ZFIN|ZDB-GENE-091118-65 - symbol:gabrg2 "gamma-aminobutyr... 101 0.00014 2
UNIPROTKB|F1LWJ7 - symbol:Gabra6 "Gamma-aminobutyric acid... 95 0.00015 2
RGD|61861 - symbol:Gabra6 "gamma-aminobutyric acid (GABA)... 95 0.00015 2
UNIPROTKB|P30191 - symbol:Gabra6 "Gamma-aminobutyric acid... 95 0.00015 2
MGI|MGI:95618 - symbol:Gabra6 "gamma-aminobutyric acid (G... 110 0.00016 1
MGI|MGI:95616 - symbol:Gabra4 "gamma-aminobutyric acid (G... 96 0.00022 2
RGD|621670 - symbol:Gabra4 "gamma-aminobutyric acid (GABA... 96 0.00022 2
UNIPROTKB|P28471 - symbol:Gabra4 "Gamma-aminobutyric acid... 96 0.00022 2
UNIPROTKB|E1C890 - symbol:GABRA4 "Uncharacterized protein... 96 0.00022 2
UNIPROTKB|P48169 - symbol:GABRA4 "Gamma-aminobutyric acid... 96 0.00022 2
UNIPROTKB|I3LIV9 - symbol:GABRA4 "Uncharacterized protein... 96 0.00022 2
UNIPROTKB|F1RR70 - symbol:GABRA6 "Uncharacterized protein... 94 0.00024 2
UNIPROTKB|E2RSQ1 - symbol:GABRG2 "Uncharacterized protein... 94 0.00027 2
UNIPROTKB|G3V875 - symbol:Gabrq "Gamma-aminobutyric acid ... 108 0.00055 1
UNIPROTKB|E1BE96 - symbol:GABRA6 "Uncharacterized protein... 91 0.00065 2
UNIPROTKB|E7EV53 - symbol:GABRA6 "Gamma-aminobutyric acid... 90 0.00087 2
UNIPROTKB|Q16445 - symbol:GABRA6 "Gamma-aminobutyric acid... 90 0.00092 2
UNIPROTKB|Q90591 - symbol:GABARB "Uncharacterized protein... 85 0.00098 1
>FB|FBgn0030707 [details] [associations]
symbol:CG8916 species:7227 "Drosophila melanogaster"
[GO:0004890 "GABA-A receptor activity" evidence=ISS] [GO:0006811
"ion transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 KO:K05175
GeneTree:ENSGT00540000070314 UniGene:Dm.26639 GeneID:32553
KEGG:dme:Dmel_CG8916 FlyBase:FBgn0030707 GenomeRNAi:32553
NextBio:779103 EMBL:BT022901 RefSeq:NP_573090.3 SMR:Q9VXL9
EnsemblMetazoa:FBtr0301232 UCSC:CG8916-RA InParanoid:Q9VXL9
OMA:ATCPMEL OrthoDB:EOG4573P3 Uniprot:Q9VXL9
Length = 612
Score = 143 (55.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 73 RTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSRE-----GYQFHINSVSKIDRVSRI 127
RT + P V +L + L ++ +RK+RE+ + + G ++NSVS IDRV+RI
Sbjct: 522 RTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARI 581
Query: 128 LFPASFGLLNLFYWISYITDQENFVWKD 155
FP SF LNL YW +Y ++ F W +
Sbjct: 582 AFPMSFAFLNLLYWWAYGMYKKEFSWSN 609
Score = 126 (49.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 24/30 (80%), Positives = 25/30 (83%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFL 30
MSF YCIAT+LEFA VHYFTK GSGE P L
Sbjct: 384 MSFLYCIATLLEFAGVHYFTKLGSGESPQL 413
>FB|FBgn0001134 [details] [associations]
symbol:Grd "Glycine receptor" species:7227 "Drosophila
melanogaster" [GO:0015276 "ligand-gated ion channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IDA] [GO:0006811
"ion transport" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005261
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 EMBL:X78349 PIR:S60749
RefSeq:NP_524131.1 UniGene:Dm.2530 ProteinModelPortal:Q24352
SMR:Q24352 STRING:Q24352 PRIDE:Q24352 EnsemblMetazoa:FBtr0075139
GeneID:39984 KEGG:dme:Dmel_CG7446 CTD:39984 FlyBase:FBgn0001134
GeneTree:ENSGT00540000070314 InParanoid:Q24352 OMA:EVDIMVR
OrthoDB:EOG4W9GKJ PhylomeDB:Q24352 GenomeRNAi:39984 NextBio:816405
Bgee:Q24352 GermOnline:CG7446 GO:GO:0016933 Uniprot:Q24352
Length = 686
Score = 129 (50.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 98 YRKKREQEVSREGYQF-HINSVSKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKDP 156
Y ++ E E R+G + NSVSKIDR SRI+FP F L+N+FYW Y++ + P
Sbjct: 623 YYRREEMEARRKGKRTPQYNSVSKIDRASRIVFPLLFILINVFYWYGYLSRSSRILANTP 682
Score = 103 (41.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 1 MSFFYCIATILEFAAVHYFTKTGSGEIPFLVSS-DEIRVHPHPKSYVSEDEEDEQTNIHK 59
+SF + ATIL+FA VHY+TK GSGE F++ D + S+ ++ I++
Sbjct: 460 LSFGFIFATILQFAVVHYYTKYGSGECYFIIEELDSESGESETEPLTSDFRGSTESKIYE 519
Query: 60 IKVDYRVCSV 69
+ + +C++
Sbjct: 520 V-IPLSMCAI 528
Score = 46 (21.3 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 42 PKSYVSEDEEDEQTNI 57
P++ EDE+DEQT +
Sbjct: 572 PRADSDEDEDDEQTQL 587
Score = 39 (18.8 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 23 GSGEIPFLVSSDEIR 37
G G PF VS+D I+
Sbjct: 62 GPGSGPFSVSADSIK 76
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 129 (50.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 43 KSYVSEDEEDEQTNIHKIKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKR 102
KS V+ D++ E+ ++ IK + + Y + PNI ++ A K
Sbjct: 352 KSVVN-DKKKEKASV--IKKN----NAYAVAVANYAPNITKDSVLPTISKSATTAEPNKA 404
Query: 103 EQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
+ E + + NSVSKIDR+SRI+FP FG NL YW +Y+
Sbjct: 405 KPEAKPQEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATYL 447
Score = 56 (24.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 326 YAFVFSALIEFATVNYFTKRG 346
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 122 (48.0 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 281 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 337
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 338 RIVFPVLFGTFNLVYWATYL 357
Score = 56 (24.8 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 237 YAFVFSALIEFATVNYFTKRG 257
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 122 (48.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 356 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 412
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 413 RIVFPVLFGTFNLVYWATYL 432
Score = 56 (24.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 312 YAFVFSALIEFATVNYFTKRG 332
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 365 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 421
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 422 RIVFPVLFGTFNLVYWATYL 441
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 365 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 421
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 422 RIVFPVLFGTFNLVYWATYL 441
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 365 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 421
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 422 RIVFPVLFGTFNLVYWATYL 441
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 365 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 421
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 422 RIVFPVLFGTFNLVYWATYL 441
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 365 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 421
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 422 RIVFPVLFGTFNLVYWATYL 441
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 366 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 422
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 423 RIVFPVLFGTFNLVYWATYL 442
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 370 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 426
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 427 RIVFPVLFGTFNLVYWATYL 446
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 266 YAFVFSALIEFATVNYFTKRG 286
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 122 (48.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 68 SVYEIRTLKVCPNIVDQ--LSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVS 125
+ Y + PN+ LST + E KK E + + F NSVSKIDR+S
Sbjct: 425 NAYAVAVANYAPNLSKDPVLSTISKSATTPEP-NKKPENKPAEAKKTF--NSVSKIDRMS 481
Query: 126 RILFPASFGLLNLFYWISYI 145
RI+FP FG NL YW +Y+
Sbjct: 482 RIVFPVLFGTFNLVYWATYL 501
Score = 56 (24.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 118 (46.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 79 PNIV-DQLSTDEVNLVANEKYRKKREQ-EVSREGYQFHINSVSKIDRVSRILFPASFGLL 136
PNI +QL N V R E+ S++ Y NS+SKID++SRI+FP FG
Sbjct: 387 PNIPKEQLPGGTGNAVGTASIRASEEKTSESKKTY----NSISKIDKMSRIVFPILFGTF 442
Query: 137 NLFYWISYI 145
NL YW +Y+
Sbjct: 443 NLVYWATYL 451
Score = 56 (24.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 117 (46.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 79 PNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNL 138
PNI + T V A+ K E++ S + NS+SKID++SRI+FP FG NL
Sbjct: 387 PNIPKE-QTPAVTSNASSASVKPSEEKTSENKKTY--NSISKIDKMSRIVFPVLFGTFNL 443
Query: 139 FYWISYI 145
YW +Y+
Sbjct: 444 VYWATYL 450
Score = 56 (24.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 113 (44.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 79 PNIV-DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLN 137
PNI +Q S N A+ K E + S + NS+SKID++SRI+FP FG N
Sbjct: 387 PNIPKEQTSAGTSN--ASSVSVKPSEDKTSENKKTY--NSISKIDKMSRIIFPVLFGTFN 442
Query: 138 LFYWISYI 145
L YW +Y+
Sbjct: 443 LVYWATYL 450
Score = 56 (24.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 413 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 442
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 413 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 442
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 320 YAFVFSALIEFATVNYFTKRG 340
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 413 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 442
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 320 YAFVFSALIEFATVNYFTKRG 340
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 443
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 443
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 443
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 111 (44.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR+SRI FP FG+ NL YW +Y+
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATYL 443
Score = 56 (24.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 110 (43.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 101 KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
K +E + E + + NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 406 KPSEEKTSESKKTY-NSISKIDKMSRIVFPVLFGTFNLVYWATYL 449
Score = 56 (24.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 110 (43.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 101 KREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
K +E + E + + NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 407 KASEEKTAESKKTY-NSISKIDKMSRIVFPILFGTFNLVYWATYL 450
Score = 56 (24.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>MGI|MGI:95615 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 MGI:MGI:95615 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2556 OrthoDB:EOG4X0MSC EMBL:M86568
IPI:IPI00110601 RefSeq:NP_032093.3 UniGene:Mm.102286
UniGene:Mm.447666 ProteinModelPortal:P26049 SMR:P26049
STRING:P26049 PhosphoSite:P26049 PaxDb:P26049 PRIDE:P26049
Ensembl:ENSMUST00000055966 GeneID:14396 KEGG:mmu:14396
InParanoid:P26049 BindingDB:P26049 ChEMBL:CHEMBL3387 NextBio:285931
Bgee:P26049 Genevestigator:P26049 GermOnline:ENSMUSG00000031343
Uniprot:P26049
Length = 492
Score = 122 (48.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + E + + E++ K+ + +++ NI
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK----KKTPAAPTKKNTTFNIVGTT 401
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
+ E T+ ST +A+ K ++ + Y NSVSK+
Sbjct: 402 YPINLAKDTEFSTISKSAAAPSASSTPTA--IASPKATYVQDSPAETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>RGD|2648 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor, alpha 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079
PRINTS:PR01616 PROSITE:PS00236 RGD:2648 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991 IPI:IPI00197343 PIR:A34130
UniGene:Rn.10367 ProteinModelPortal:P20236 IntAct:P20236
STRING:P20236 PRIDE:P20236 InParanoid:P20236 BindingDB:P20236
ChEMBL:CHEMBL328 NextBio:604953 ArrayExpress:P20236
Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 122 (48.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT-NIHKI 60
+ + + ++EFA V+YFTK + E + + E++ K+ + ++ T NI
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK----KKTPAAPTKKTSTTFNIVGT 401
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ E T+ ST V +A+ K ++ + Y NSVSK
Sbjct: 402 TYPINLALDTEFSTISKAAAAPSASSTPTV--IASPKTTYVQDSPAETKTY----NSVSK 455
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D++SRI+FP F + NL YW +Y+
Sbjct: 456 VDKISRIIFPVLFAIFNLVYWATYV 480
>UNIPROTKB|P20236 [details] [associations]
symbol:Gabra3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
RGD:2648 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991
IPI:IPI00197343 PIR:A34130 UniGene:Rn.10367
ProteinModelPortal:P20236 IntAct:P20236 STRING:P20236 PRIDE:P20236
InParanoid:P20236 BindingDB:P20236 ChEMBL:CHEMBL328 NextBio:604953
ArrayExpress:P20236 Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 122 (48.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQT-NIHKI 60
+ + + ++EFA V+YFTK + E + + E++ K+ + ++ T NI
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK----KKTPAAPTKKTSTTFNIVGT 401
Query: 61 KVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSK 120
+ E T+ ST V +A+ K ++ + Y NSVSK
Sbjct: 402 TYPINLALDTEFSTISKAAAAPSASSTPTV--IASPKTTYVQDSPAETKTY----NSVSK 455
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D++SRI+FP F + NL YW +Y+
Sbjct: 456 VDKISRIIFPVLFAIFNLVYWATYV 480
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 110 (43.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 68 SVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEV-SREGYQFHINSVSKIDRVSR 126
+ Y + PN+ + ++ A + E+ S++ Y NS+SKID++SR
Sbjct: 377 NTYSTGKMTPAPNMPKDSAPSVISNAAPAPVKPVEEKPAESKKTY----NSISKIDKMSR 432
Query: 127 ILFPASFGLLNLFYWISYI 145
I+FP FG NL YW +Y+
Sbjct: 433 IIFPVLFGTFNLVYWATYL 451
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 3 FFYCIATILEFAAVHYFTK 21
+ + + ++EFA V+YFTK
Sbjct: 328 YAFVFSALIEFATVNYFTK 346
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/144 (23%), Positives = 66/144 (45%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPAKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K ++ + Y NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTPT-IIASPKATYVQDSPTETKTY----NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKIDR++RI FP FG NL YW +Y+
Sbjct: 416 NSVSKIDRIARIAFPLLFGTFNLVYWATYL 445
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 321 YAFVFSALIEFATVNYFTKRG 341
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NS+SKID++SRI+FP FG NL YW +Y+
Sbjct: 420 NSISKIDKMSRIIFPLLFGTFNLVYWATYL 449
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 3 FFYCIATILEFAAVHYFTKTG 23
+ + + ++EFA V+YFTK G
Sbjct: 328 YAFVFSALIEFATVNYFTKRG 348
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAAPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K Q++ E + NSVSK+
Sbjct: 401 TTYPINLAKDTEFSTISKGAAPSASSTPT-IIASPK--TTYVQDIPTETKTY--NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 105 (42.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YWI Y+
Sbjct: 427 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWIGYL 462
Score = 57 (25.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE 26
F + A ++E+ +HYFT G+
Sbjct: 337 FIFVFAALMEYGTLHYFTSNRKGD 360
Score = 35 (17.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 47 SEDEEDEQTNIHK 59
++DE+DE ++K
Sbjct: 35 ADDEDDEDLTVNK 47
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 104 (41.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
Score = 58 (25.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE 26
F + A ++E+ +HYFT G+
Sbjct: 341 FIFVFAALMEYGTLHYFTSNNKGK 364
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 104 (41.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
Score = 58 (25.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE 26
F + A ++E+ +HYFT G+
Sbjct: 341 FIFVFAALMEYGTLHYFTSNNKGK 364
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 108 (43.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
NSVSKID++SRI+FP FG NL YW +Y+
Sbjct: 452 NSVSKIDKMSRIVFPVLFGTFNLVYWATYL 481
Score = 51 (23.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 3 FFYCIATILEFAAVHYFTK 21
+ + + ++EFA V+YFTK
Sbjct: 366 YAFVFSALIEFATVNYFTK 384
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 104 (41.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 428 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 463
Score = 56 (24.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE 26
F + A ++E+ +HYFT G+
Sbjct: 341 FIFVFAALMEYGTLHYFTSNQKGK 364
Score = 35 (17.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 47 SEDEEDEQTNIHK 59
++DE+DE ++K
Sbjct: 39 ADDEDDEDLTVNK 51
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 104 (41.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 431 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 466
Score = 56 (24.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGE 26
F + A ++E+ +HYFT G+
Sbjct: 344 FIFVFAALMEYGTLHYFTSNKKGK 367
Score = 34 (17.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 48 EDEEDEQTNIHK 59
+DE+DE ++K
Sbjct: 43 DDEDDEDLTVNK 54
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 117 (46.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + + ++ + E++ P + V + N + I
Sbjct: 299 YAFVFSALIEFATVNYFTKRSWAWDGKKVLEAQEMK-KKEPVALVKKTN-----NTYNI- 351
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVA-NEKYRKKREQEVSREGYQFHINSVSK 120
V + Y + K P + + A N + R +E E + + NSVSK
Sbjct: 352 ----VGTTYPLNIAKD-PGLPTISKSAAATATATNVPPKMPRLEEKLPESKKTY-NSVSK 405
Query: 121 IDRVSRILFPASFGLLNLFYWISYI 145
+D++SRI+FP F + NL YW +Y+
Sbjct: 406 VDKMSRIVFPVLFAIFNLVYWATYV 430
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 117 (46.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAVPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K Q++ E + NSVSK+
Sbjct: 401 TTYPINLAKDTEFSAISKGAAPSTSSTPT-IIASPK--TTCVQDIPTETKTY--NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 117 (46.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 3 FFYCIATILEFAAVHYFTKTG-SGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIHKIK 61
+ + + ++EFA V+YFTK + E + + E++ K + + T + +
Sbjct: 346 YAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMK-----KKTPAVPTKKTSTTFNIVG 400
Query: 62 VDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKI 121
Y + + + S+ ++A+ K Q++ E + NSVSK+
Sbjct: 401 TTYPINLAKDTEFSAISKGAAPSTSSTPT-IIASPK--TTCVQDIPTETKTY--NSVSKV 455
Query: 122 DRVSRILFPASFGLLNLFYWISYI 145
D++SRI+FP F + NL YW +Y+
Sbjct: 456 DKISRIIFPVLFAIFNLVYWATYV 479
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 106 (42.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 94 ANEKYRKKREQEVSREGYQFHINSV----SKIDRVSRILFPASFGLLNLFYWISYIT 146
A +++ + + + ++G N++ S ID+ SRILFP SFG NL YWI Y+T
Sbjct: 379 ATDRFSRPSQSDFHQQGSAVPANNMLIGTSIIDKYSRILFPLSFGAFNLVYWIVYLT 435
Score = 49 (22.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YF+
Sbjct: 310 FAFVFSALIEFAAVNYFS 327
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 104 (41.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
REG + HI ++KID SRI FP +F L NL YW+ Y+
Sbjct: 405 REG-RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYL 440
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + A ++E+ +HYFT
Sbjct: 318 FIFVFAALMEYGTLHYFT 335
Score = 35 (17.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 47 SEDEEDEQTNIHK 59
++DE+DE ++K
Sbjct: 16 ADDEDDEDLTVNK 28
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 110 (43.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++SR F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVNYSDLTMKASDKFKFVFREKISRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
Score = 39 (18.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 FFYCIATILEFAAVHY 18
F + +LE+A HY
Sbjct: 314 FSFVFGALLEYAVAHY 329
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 101 (40.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 100 KKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
KK+E + + SKID +RILFP SFG N+ YW+ Y++
Sbjct: 502 KKKEAKAQPQPAAPATGGASKIDEYARILFPVSFGAFNMVYWVVYLS 548
Score = 53 (23.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 106 (42.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVNYSDLTMKASDKFKFVFREKIGRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
Score = 39 (18.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 FFYCIATILEFAAVHY 18
F + +LE+A HY
Sbjct: 314 FSFVFGALLEYAVAHY 329
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 106 (42.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 83 DQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVSKIDRVSRILFPASFGLLNLFYWI 142
D ++ ++ + A++K++ +++ R F I + S +DR S++LFP F L N+FYW
Sbjct: 376 DNVNYSDLTMKASDKFKFVFREKIGRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWA 435
Query: 143 SYI 145
Y+
Sbjct: 436 YYM 438
Score = 39 (18.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 FFYCIATILEFAAVHY 18
F + +LE+A HY
Sbjct: 314 FSFVFGALLEYAVAHY 329
>MGI|MGI:1888498 [details] [associations]
symbol:Gabrq "gamma-aminobutyric acid (GABA) A receptor,
subunit theta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISS] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 MGI:MGI:1888498
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GeneTree:ENSGT00630000089685 CTD:55879
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708 KO:K05192
OrthoDB:EOG48SGSN PANTHER:PTHR18945:SF87 EMBL:AF189260
IPI:IPI00124252 RefSeq:NP_065234.1 UniGene:Mm.117125
UniGene:Mm.487532 ProteinModelPortal:Q9JLF1 SMR:Q9JLF1
PhosphoSite:Q9JLF1 PRIDE:Q9JLF1 Ensembl:ENSMUST00000033711
GeneID:57249 KEGG:mmu:57249 InParanoid:Q9JLF1 BindingDB:Q9JLF1
ChEMBL:CHEMBL3249 NextBio:313527 Bgee:Q9JLF1 Genevestigator:Q9JLF1
GermOnline:ENSMUSG00000031344 Uniprot:Q9JLF1
Length = 638
Score = 107 (42.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ ++
Sbjct: 598 EGFSFQLFKPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHV 637
Score = 41 (19.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 29 FLVSSDEIRVHPHPKSYVSEDEEDEQT 55
FL + I + H +S +DE+ E++
Sbjct: 474 FLTNDSIIPIKIHSRSDACDDEDSEES 500
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 514 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 544
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 3 FFYCIATILEFAAVHYFT-------KTGSGEIPFLVSSDEIRVHPHPKS 44
F + + ++EFAAV+YFT K + + P +S+ + HP++
Sbjct: 327 FAFVFSALIEFAAVNYFTNVQMEKAKRKTSKAPQEISAAPVLREKHPET 375
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT-DQENFVWKDPPTISH 161
+ SKID+ SRILFP +F NL YW+ Y++ D F PT H
Sbjct: 413 VGGTSKIDQYSRILFPVAFAGFNLVYWVVYLSKDTMEFF---EPTAMH 457
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 311 FAFVFSALIEFAAVNYFT 328
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 424 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 454
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 237 FAFVFSALIEFAAVNYFT 254
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 101 (40.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI V+KID +RI FP +FGL N+ YW SY+
Sbjct: 432 RHG-RLHIR-VAKIDSYARIFFPTAFGLFNVVYWFSYL 467
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 3 FFYCIATILEFAAVHYF 19
F + A ++E+ +HYF
Sbjct: 343 FIFVFAALIEYGTLHYF 359
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YWI Y++
Sbjct: 410 IGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 441
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 3 FFYCIATILEFAAVHYFTKTGS 24
F + + ++EFAAV+YFT S
Sbjct: 310 FAFVFSALIEFAAVNYFTNLQS 331
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YWI Y++
Sbjct: 411 IGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 3 FFYCIATILEFAAVHYFTKTGS 24
F + + ++EFAAV+YFT S
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQS 332
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 115 INSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
I SKID+ SRILFP +F NL YWI Y++
Sbjct: 411 IGGTSKIDQYSRILFPVAFAGFNLVYWIVYLS 442
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 3 FFYCIATILEFAAVHYFTKTGS 24
F + + ++EFAAV+YFT S
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQS 332
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 110 (43.8 bits), Expect = 0.00016, P = 0.00016
Identities = 44/147 (29%), Positives = 65/147 (44%)
Query: 3 FFYCIATILEFAAVHYFTKTGSGEIPFLVSSDEIRVHPHPKSYVSEDEEDEQTNIH---K 59
F + + ++EFAAV+YFT S + + P KS SE + E +H K
Sbjct: 311 FAFVFSALIEFAAVNYFTNLQSQKAER--QAQTAATPPVAKSKASESLQAEIV-VHSDSK 367
Query: 60 IKVDYRVCSVYEIRTLKVCPNIVDQLSTDEVNLVANEKYRKKREQEVSREGYQFHINSVS 119
+ R+ S+ TL + P S++ ++ K VS S
Sbjct: 368 YHLKKRISSL----TLPIVP------SSEASKALSRTPILKSTP--VSPPLLLPATGGTS 415
Query: 120 KIDRVSRILFPASFGLLNLFYWISYIT 146
KID+ SRILFP +F NL YWI Y++
Sbjct: 416 KIDQYSRILFPVAFAGFNLVYWIVYLS 442
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 511 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 541
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 511 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 541
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 511 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 541
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 326 FAFVFSALIEFAAVNYFT 343
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 96 (38.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 116 NSVSKIDRVSRILFPASFGLLNLFYWISYIT 146
+ SKID+ +RILFP +FG N+ YW+ Y++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVYLS 543
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 327 FAFVFSALIEFAAVNYFT 344
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 94 (38.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYITDQENFVWKD 155
SKID+ SRILFP +F NL YWI Y++ F + +
Sbjct: 401 SKIDQYSRILFPVAFAGFNLVYWIVYLSKDTMFSFSE 437
Score = 53 (23.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 298 FAFVFSALIEFAAVNYFT 315
>UNIPROTKB|E2RSQ1 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01620
GO:GO:0016021 GO:GO:0004890 PANTHER:PTHR18945 SUPFAM:SSF90112
GO:GO:0007214 GO:GO:0006821 GeneTree:ENSGT00540000070314
EMBL:AAEX03003042 NextBio:20862353 Ensembl:ENSCAFT00000027291
Uniprot:E2RSQ1
Length = 216
Score = 94 (38.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 108 REGYQFHINSVSKIDRVSRILFPASFGLLNLFYWISYI 145
R G + HI ++K+D +RI FP +F L NL YW+SY+
Sbjct: 179 RHG-RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYL 214
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 3 FFYCIATILEFAAVHYF 19
F + + ++E+ +HYF
Sbjct: 84 FIFVFSALVEYGTLHYF 100
>UNIPROTKB|G3V875 [details] [associations]
symbol:Gabrq "Gamma-aminobutyric acid A receptor, theta,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008101 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:CH474110 UniGene:Rn.81067 ProteinModelPortal:G3V875
Ensembl:ENSRNOT00000022880 RGD:68331 Uniprot:G3V875
Length = 640
Score = 108 (43.1 bits), Expect = 0.00055, P = 0.00055
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 109 EGYQFHI---NSVSKIDRVSRILFPASFGLLNLFYWISYI 145
EG+ F + N V K+DR SR LFP SFGL N+ YW+ +I
Sbjct: 600 EGFSFQLFNPNRVPKVDRWSRFLFPLSFGLFNVVYWLYHI 639
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 91 (37.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YWI Y++
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWIVYLS 442
Score = 53 (23.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 311 FAFVFSALIEFAAVNYFT 328
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 90 (36.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 405 SKIDQYSRILFPVAFAGFNLVYWVVYLS 432
Score = 53 (23.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 301 FAFVFSALIEFAAVNYFT 318
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 90 (36.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 119 SKIDRVSRILFPASFGLLNLFYWISYIT 146
SKID+ SRILFP +F NL YW+ Y++
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVYLS 442
Score = 53 (23.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 3 FFYCIATILEFAAVHYFT 20
F + + ++EFAAV+YFT
Sbjct: 311 FAFVFSALIEFAAVNYFT 328
>UNIPROTKB|Q90591 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 Pfam:PF02932 GO:GO:0016021
PANTHER:PTHR18945 SUPFAM:SSF90112 GO:GO:0006811
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 UniGene:Gga.734 EMBL:X72807
IPI:IPI00814531 Ensembl:ENSGALT00000041081 InParanoid:Q90591
Uniprot:Q90591
Length = 86
Score = 85 (35.0 bits), Expect = 0.00098, P = 0.00098
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 94 ANEKYRKKREQEVSREGYQFHIN-----SVSKIDRVSRILFPASFGLLNLFYWISYI 145
A E++ +++ + R Q I V+ IDR SRI FP F N+ YW+ Y+
Sbjct: 29 ALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYV 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 161 161 0.00074 107 3 11 22 0.49 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 584 (62 KB)
Total size of DFA: 158 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.80u 0.08s 20.88t Elapsed: 00:00:06
Total cpu time: 20.81u 0.09s 20.90t Elapsed: 00:00:06
Start: Thu Aug 15 11:42:12 2013 End: Thu Aug 15 11:42:18 2013