RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12320
(175 letters)
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 553
Score = 84.1 bits (206), Expect = 4e-20
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 44 KPNIILFLTDDQDVE----LGSLNFMKKTLRFLRDGGAEFRHAYTTTPMCCPSRSSLLTG 99
+PNIIL + DD + G+ + L GG + +P+ PSR++ +TG
Sbjct: 4 RPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLATPSRAAFMTG 63
Query: 100 LYMHNHHVYTNNDN----CSSHSWQANHEPRSFATYLSNSGYRT 139
Y + + + ++ S + +FA L + GY T
Sbjct: 64 RYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYST 107
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId:
9606]}
Length = 485
Score = 78.3 bits (191), Expect = 5e-18
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 43 RKPNIILFLTDDQDV-ELGSLNFMK-KT--LRFLRDGGAEFRHAYTTTPMCCPSRSSLLT 98
R PNI+L DD +LG T L L GG F Y + PSR++LLT
Sbjct: 1 RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLGTPSRAALLT 60
Query: 99 GLYMHNHHVYTNNDNCSSHSWQANHEPRSFATYLSNSGYR 138
G +Y SS E + A L+ GY
Sbjct: 61 GRLPVRMGMYPGVLVPSSRGGL-PLEEVTVAEVLAARGYL 99
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 525
Score = 74.8 bits (182), Expect = 8e-17
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 11/106 (10%)
Query: 43 RKPNIILFLTDDQDV-ELGSLNFMKKT--LRFLRDGGAEFRHAYTTTPMCCPSRSSLLTG 99
++PN ++ + DD ++G+ T L L G +T P+RS LLTG
Sbjct: 1 KRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTA-STGSPTRSMLLTG 59
Query: 100 LYMHNHHVYTNNDNCS-------SHSWQANHEPRSFATYLSNSGYR 138
H + T + + + N + L +GY+
Sbjct: 60 TDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQ 105
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 492
Score = 74.0 bits (180), Expect = 2e-16
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 43 RKPNIILFLTDDQDVE-LGSLNFMKKT--LRFLRDGGAEFRHAYTTTPMCCPSRSSLLTG 99
R P+++ L DD +G +T L L GG + YT P+ PSRS LLTG
Sbjct: 2 RPPHLVFLLADDLGWNDVGFHGSRIRTPHLDALAAGGVLLDNYYTQ-PLATPSRSQLLTG 60
Query: 100 LYMHNHHVYTNNDNCSSHSWQANHEPRSFATYLSNSGYR 138
Y + S + + L +GY
Sbjct: 61 RYQIRTGLQHQIIWPCQPSC-VPLDEKLLPQLLKEAGYT 98
>d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas
fluorescens [TaxId: 294]}
Length = 406
Score = 48.0 bits (112), Expect = 1e-07
Identities = 9/44 (20%), Positives = 13/44 (29%)
Query: 68 TLRFLRDGGAEFRHAYTTTPMCCPSRSSLLTGLYMHNHHVYTNN 111
L L G P+ S++TG H + N
Sbjct: 42 FLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHGICGNF 85
>d1o98a2 c.76.1.3 (A:2-76,A:311-510)
2,3-Bisphosphoglycerate-independent phosphoglycerate
mutase, catalytic domain {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 275
Score = 35.0 bits (79), Expect = 0.002
Identities = 14/103 (13%), Positives = 22/103 (21%), Gaps = 17/103 (16%)
Query: 43 RKPNIILFLTDDQ---DVELGSLNFMKKT--LRFLRDGGAEFRHAYTTTPMCCPSRSSLL 97
+KP ++ L D D G+ + P
Sbjct: 2 KKPVALIIL-DGFALRDETYGNAVAQANKPNFDRYWNEY----------PHTTLKACGEA 50
Query: 98 TGLYMHNHHVYTNN-DNCSSHSWQANHEPRSFATYLSNSGYRT 139
GL N + + + LS G R
Sbjct: 51 VGLPEGQMGNSEVGHLNIGAGRIVYTNLDNTIGEVLSQHGLRQ 93
>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB
{Streptococcus mutans [TaxId: 1309]}
Length = 283
Score = 34.2 bits (77), Expect = 0.006
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 79 FRHAYTTTPMCCPSRSSLLTGLYMHNHHVYTNN 111
H T + P+ + + G + + T
Sbjct: 38 LGHISKTVGLNVPNMAKIGLGNIPRDTPLKTVP 70
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 28.5 bits (62), Expect = 0.43
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 114 CSSHSWQANHEPRSFATYLSNSGYR 138
S+ +W +N S A L+++GY
Sbjct: 69 ASATNWISNLPNNSLAFILADAGYD 93
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I
{Escherichia coli [TaxId: 562]}
Length = 151
Score = 25.5 bits (55), Expect = 2.5
Identities = 8/54 (14%), Positives = 16/54 (29%)
Query: 82 AYTTTPMCCPSRSSLLTGLYMHNHHVYTNNDNCSSHSWQANHEPRSFATYLSNS 135
S L G + ++ ++ + + R T +SNS
Sbjct: 83 GAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNS 136
>d2zjrt1 b.84.4.1 (T:2-85) Ribosomal protein L27 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 84
Score = 24.7 bits (54), Expect = 2.7
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 6 TKKS-TSSLNVDSSDHRRLKVKKQLSGQQSFPGYM 39
KK SS N S+ + L VKK G+ G +
Sbjct: 2 HKKGVGSSKNGRDSNPKYLGVKKF-GGEVVKAGNI 35
>d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger
domain-containing protein 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 24.1 bits (52), Expect = 4.2
Identities = 3/33 (9%), Positives = 15/33 (45%)
Query: 4 TLTKKSTSSLNVDSSDHRRLKVKKQLSGQQSFP 36
T+ + T +++ S + ++++++
Sbjct: 7 TMDGRQTHTVDSLSRLTKVEELRRKIQELFHVE 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.129 0.382
Gapped
Lambda K H
0.267 0.0683 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 595,995
Number of extensions: 24282
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 12
Length of query: 175
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 96
Effective length of database: 1,322,926
Effective search space: 127000896
Effective search space used: 127000896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.1 bits)