Query psy12338
Match_columns 106
No_of_seqs 20 out of 22
Neff 3.0
Searched_HMMs 13730
Date Fri Aug 16 16:30:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12338.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12338hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rlwa_ b.7.1.1 (A:) Domain fr 2.3 2.1E+02 0.016 16.1 0.3 10 96-105 49-58 (126)
2 d2zkmx2 b.7.1.1 (X:678-799) Ph 2.1 4.1E+02 0.03 15.5 1.6 9 89-97 45-53 (122)
3 d1dqva1 b.7.1.2 (A:295-424) Sy 2.0 2.4E+02 0.018 16.3 0.3 11 95-105 60-70 (130)
4 d1bdya_ b.7.1.1 (A:) Domain fr 1.6 4.4E+02 0.032 15.3 0.9 6 100-105 52-57 (123)
5 d1ugka_ b.7.1.2 (A:) Synaptota 1.5 3.4E+02 0.025 15.8 0.3 10 96-105 66-75 (138)
6 d1wfja_ b.7.1.2 (A:) C2 domain 1.4 3E+02 0.022 15.8 -0.2 6 100-105 55-60 (136)
7 d1rsya_ b.7.1.2 (A:) Synaptoga 1.3 4.1E+02 0.03 15.4 0.3 14 92-105 73-86 (143)
8 d1iiea_ a.109.1.1 (A:) Class I 1.2 4.4E+02 0.032 15.7 0.3 11 1-11 21-31 (75)
9 d1jmxg_ a.137.9.1 (G:) Quinohe 1.2 6.2E+02 0.045 15.1 1.0 8 98-105 50-57 (77)
10 d1pbyc_ a.137.9.1 (C:) Quinohe 1.2 6.3E+02 0.046 15.1 1.0 8 98-105 52-59 (79)
No 1
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.29 E-value=2.1e+02 Score=16.15 Aligned_cols=10 Identities=60% Similarity=1.079 Sum_probs=4.8
Q ss_pred CCCCCCCCcC
Q psy12338 96 WNGIEPHWNE 105 (106)
Q Consensus 96 ~ngt~p~~~~ 105 (106)
.+...|.|||
T Consensus 49 ~~t~nP~wne 58 (126)
T d1rlwa_ 49 NNDINPVWNE 58 (126)
T ss_dssp TTCSSCEEEE
T ss_pred CCCccceece
Confidence 4444455543
No 2
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.14 E-value=4.1e+02 Score=15.49 Aligned_cols=9 Identities=33% Similarity=0.911 Sum_probs=3.6
Q ss_pred CCCCccCCC
Q psy12338 89 WNGMKPHWN 97 (106)
Q Consensus 89 ~NGt~P~~n 97 (106)
.||-.|.||
T Consensus 45 ~n~~nP~wn 53 (122)
T d2zkmx2 45 TNSINPVWK 53 (122)
T ss_dssp SCCSSCBCC
T ss_pred CCeecceEc
Confidence 333444443
No 3
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=2.02 E-value=2.4e+02 Score=16.25 Aligned_cols=11 Identities=36% Similarity=0.734 Sum_probs=5.3
Q ss_pred CCCCCCCCCcC
Q psy12338 95 HWNGIEPHWNE 105 (106)
Q Consensus 95 ~~ngt~p~~~~ 105 (106)
..+...|.|||
T Consensus 60 ~~~t~~P~wne 70 (130)
T d1dqva1 60 HRKTLNPIFNE 70 (130)
T ss_dssp CCSCSSCEEEE
T ss_pred EcCCCCeeeee
Confidence 34444555554
No 4
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=1.55 E-value=4.4e+02 Score=15.30 Aligned_cols=6 Identities=33% Similarity=1.138 Sum_probs=2.9
Q ss_pred CCCCcC
Q psy12338 100 EPHWNE 105 (106)
Q Consensus 100 ~p~~~~ 105 (106)
.|-|||
T Consensus 52 nP~WnE 57 (123)
T d1bdya_ 52 YPEWKS 57 (123)
T ss_dssp CCCTTC
T ss_pred Ccccce
Confidence 455544
No 5
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.53 E-value=3.4e+02 Score=15.75 Aligned_cols=10 Identities=20% Similarity=0.661 Sum_probs=4.6
Q ss_pred CCCCCCCCcC
Q psy12338 96 WNGIEPHWNE 105 (106)
Q Consensus 96 ~ngt~p~~~~ 105 (106)
.+...|.|||
T Consensus 66 ~~t~nP~wne 75 (138)
T d1ugka_ 66 RKTLDPAFDE 75 (138)
T ss_dssp SSCSSCEEEE
T ss_pred eCCCCCceee
Confidence 3444455543
No 6
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=1.41 E-value=3e+02 Score=15.76 Aligned_cols=6 Identities=67% Similarity=1.636 Sum_probs=2.7
Q ss_pred CCCCcC
Q psy12338 100 EPHWNE 105 (106)
Q Consensus 100 ~p~~~~ 105 (106)
.|-|||
T Consensus 55 nP~Wne 60 (136)
T d1wfja_ 55 TPEWNE 60 (136)
T ss_dssp SCEEEE
T ss_pred cEEEee
Confidence 344543
No 7
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=1.31 E-value=4.1e+02 Score=15.36 Aligned_cols=14 Identities=36% Similarity=0.601 Sum_probs=0.0
Q ss_pred CccCCCCCCCCCcC
Q psy12338 92 MKPHWNGIEPHWNE 105 (106)
Q Consensus 92 t~P~~ngt~p~~~~ 105 (106)
|+..-+...|.|||
T Consensus 73 T~~~~~t~~P~wne 86 (143)
T d1rsya_ 73 TKVHRKTLNPVFNE 86 (143)
T ss_dssp CCCCTTCSSCEEEE
T ss_pred EEEeccccCcceee
No 8
>d1iiea_ a.109.1.1 (A:) Class II MHC-associated invariant chain ectoplasmic trimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.20 E-value=4.4e+02 Score=15.71 Aligned_cols=11 Identities=27% Similarity=0.450 Sum_probs=0.0
Q ss_pred CCCCCCCCccC
Q psy12338 1 MEPHWNGMEPH 11 (106)
Q Consensus 1 ~~p~~ngT~P~ 11 (106)
+-|+||++.++
T Consensus 21 ~~P~ln~sf~~ 31 (75)
T d1iiea_ 21 VYPPLKGSFPE 31 (75)
T ss_dssp CCCCCCSCHHH
T ss_pred hchhhHHHHHH
No 9
>d1jmxg_ a.137.9.1 (G:) Quinohemoprotein amine dehydrogenase C chain {Pseudomonas putida [TaxId: 303]}
Probab=1.17 E-value=6.2e+02 Score=15.08 Aligned_cols=8 Identities=25% Similarity=0.638 Sum_probs=0.0
Q ss_pred CCCCCCcC
Q psy12338 98 GIEPHWNE 105 (106)
Q Consensus 98 gt~p~~~~ 105 (106)
.++|+|++
T Consensus 50 ~~ypdW~~ 57 (77)
T d1jmxg_ 50 STYQDWNA 57 (77)
T ss_dssp TTCTTTTT
T ss_pred ccCccccc
No 10
>d1pbyc_ a.137.9.1 (C:) Quinohemoprotein amine dehydrogenase C chain {Paracoccus denitrificans [TaxId: 266]}
Probab=1.15 E-value=6.3e+02 Score=15.11 Aligned_cols=8 Identities=25% Similarity=0.875 Sum_probs=0.0
Q ss_pred CCCCCCcC
Q psy12338 98 GIEPHWNE 105 (106)
Q Consensus 98 gt~p~~~~ 105 (106)
.++|+|++
T Consensus 52 ~~ypdW~~ 59 (79)
T d1pbyc_ 52 NTYPNWSA 59 (79)
T ss_dssp TTCTTTTT
T ss_pred ccCccccc
Done!