BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12348
(178 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G+ + YIA QGP +TV DFW M+ Q Q IVM+ + VE GRVKC
Sbjct: 95 PSSDYINANYIDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVKC 154
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRD--SEVLEVKHFHLHDWQDFS 139
KY+PD V+ + +V C E E + + + R +E+ EVK FH W D
Sbjct: 155 YKYWPDDTE---VYGDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREVKQFHFTGWPDHG 211
Query: 140 IPGGPDVLVNFCHLVRNSTPTSQLS-VVHC 168
+P L++F V+ S P S VVHC
Sbjct: 212 VPYHATGLLSFIRRVKLSNPPSAGPIVVHC 241
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
AD + + G+++ EYIA QGP +T DFW MVLQ + IVML EK RVKC+
Sbjct: 79 ADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 138
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIP-- 141
Y+P E + +I V +E C H RI E+ +V HF+ W D +P
Sbjct: 139 YWP-FTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTA 197
Query: 142 GGPDVLVNFCHLVR-NSTPTSQLSVVHC 168
+ ++ F H+VR +T + ++HC
Sbjct: 198 NAAESILQFVHMVRQQATKSKGPMIIHC 225
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
AD + + G+++ EYIA QGP +T DFW MVLQ + IVML EK RVKC+
Sbjct: 77 ADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 136
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIP-- 141
Y+P E + +I V +E C H RI E+ +V HF+ W D +P
Sbjct: 137 YWP-FTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTA 195
Query: 142 GGPDVLVNFCHLVR-NSTPTSQLSVVHC 168
+ ++ F H+VR +T + ++HC
Sbjct: 196 NAAESILQFVHMVRQQATKSKGPMIIHC 223
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G+ ++ ++IA QGP +T+ DFW MV + V IVML VE+GR KCE+Y+P + +
Sbjct: 107 GYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQ-- 164
Query: 94 VFNNIRVGCTEQEVGSHHTCTH--LRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFC 151
+ +I V T + V T ++ + SE ++ FH W D +P D+L+NF
Sbjct: 165 DYGDITVAMTSEVVLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFR 224
Query: 152 HLVRN---STPTSQLSVVHC 168
+LVR+ P +VHC
Sbjct: 225 YLVRDYMKQIPPESPILVHC 244
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +TV FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 17 IAAQGPKADTVADF----WTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCS 72
+ Q + DT +D+ + G+ YIA QGP +T+ DFW MV I+M+ +
Sbjct: 62 VRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTN 121
Query: 73 FVEKGRVKCEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDS--EVLEVKHF 130
VE GRVKC KY+PD ++ +I+V E E+ + + + + E+ E++ F
Sbjct: 122 LVEVGRVKCCKYWPDDTE---IYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQF 178
Query: 131 HLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-VVHC 168
H W D +P L+ F V++ +P S VVHC
Sbjct: 179 HFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLVVHC 217
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G+ ++ ++IA QGP +T+ DFW MV + V I+ML VE+GR KCE+Y+P + +
Sbjct: 107 GYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQ-- 164
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRIT--RDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFC 151
+ +I V T + V T + + SE ++ FH W D +P D+L+NF
Sbjct: 165 DYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTSWPDHGVPDTTDLLINFR 224
Query: 152 HLVRN----STPTSQLSV 165
+LVR+ S P S + V
Sbjct: 225 YLVRDYMKQSPPESPILV 242
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG VKC +Y+P + + +F N+
Sbjct: 93 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQYWPQKEEKEMIFEDTNL 152
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 153 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 212
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 213 SGSLSPEHGPVVVHC 227
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 87 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 146
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 147 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 206
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 207 SGSLSPEHGPVVVHC 221
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 80 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 139
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 140 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 199
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 200 SGSLSPEHGPVVVHC 214
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 115 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 174
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 175 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 234
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 235 SGSLSPEHGPVVVHC 249
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 83 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 142
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 143 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 202
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 203 SGSLSPEHGPVVVHC 217
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 85 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 144
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 145 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 204
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 205 SGSLSPEHGPVVVHC 219
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 87 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 146
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 147 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 206
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 207 SGSLSPEHGPVVVHC 221
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 88 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 147
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 148 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 207
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 208 SGSLSPEHGPVVVHC 222
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 93 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 152
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 153 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 212
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 213 SGSLSPEHGPVVVHC 227
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G+ YIA QGP +TV DFW M+ Q IVM+ + VE GRVKC
Sbjct: 73 PHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKC 132
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDS--EVLEVKHFHLHDWQDFS 139
+Y+PD V+ +I+V E E + + + + E+ E++ FH W D
Sbjct: 133 VRYWPDDTE---VYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHG 189
Query: 140 IPGGPDVLVNFCHLVR-NSTPTSQLSVVHC 168
+P L+ F V+ + P + VVHC
Sbjct: 190 VPCYATGLLGFVRQVKFLNPPEAGPIVVHC 219
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 38 EAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF-- 95
+ YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F
Sbjct: 90 QRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFED 149
Query: 96 NNIRVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHL 153
N+++ +++ S++T L + E E+ HFH W DF +P P +NF
Sbjct: 150 TNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFK 209
Query: 154 VRNS---TPTSQLSVVHC 168
VR S +P VVHC
Sbjct: 210 VRESGSLSPEHGPVVVHC 227
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 25 DTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKY 84
D + + G+ ++ ++IA QGP +T+ DFW MV + V I+ML VE+GR KCE+Y
Sbjct: 98 DYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEY 157
Query: 85 FPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRIT--RDSEVLEVKHFHLHDWQDFSIPG 142
+P + + + +I V T + V T + + SE ++ FH D +P
Sbjct: 158 WPSKQAQ--DYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTSAPDHGVPD 215
Query: 143 GPDVLVNFCHLVRN---STPTSQLSVVHC 168
D+L+NF +LVR+ +P +VHC
Sbjct: 216 TTDLLINFRYLVRDYMKQSPPESPILVHC 244
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHA 215
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHA 215
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G ++ E+I QGP T DFW M + IVML EKGR KC++
Sbjct: 98 SDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQ 157
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGG 143
Y+P+ F + +I+V + T + R SE ++HFH W DF +P
Sbjct: 158 YWPNDTVPVF-YGDIKVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNP 216
Query: 144 PDVLVNFCHLVRNSTPTSQLS-VVHC 168
P LV F R+ Q VVHC
Sbjct: 217 PQTLVRFVRAFRDRIGAEQRPIVVHC 242
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHS 215
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHS 215
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVH 167
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVH 214
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVH 167
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVH 214
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 87 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 146
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 147 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 206
Query: 157 S---TPTSQLSVVH 167
S +P VVH
Sbjct: 207 SGSLSPEHGPVVVH 220
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G+ + YIA QGP +T DFW MV + + +VM+ EK R+KC++
Sbjct: 85 SDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQ 144
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGG 143
Y+P+R E + F + + T + L SE EV+HF W D +P
Sbjct: 145 YWPNRGTETYGFIQVTLLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEY 204
Query: 144 PDVLVNFCHLVRN-STPTSQLSVVHC 168
P + F V+ + P + VVHC
Sbjct: 205 PTPFLAFLRRVKTCNPPDAGPIVVHC 230
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVN--- 90
G+ + YIA QGP A+T DFW + ++ +VML E GR KC +Y+P +
Sbjct: 384 GYRQQKAYIATQGPLAETTEDFWRALWENNSTIVVMLTKLREMGREKCHQYWPAERSARY 443
Query: 91 EYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF 150
+YFV + + Q + T RD + V+ F DW + P + ++F
Sbjct: 444 QYFVVDPMAEYNMPQYILREFKVTD---ARDGQSRTVRQFQFTDWPEQGAPKSGEGFIDF 500
Query: 151 CHLV 154
V
Sbjct: 501 IGQV 504
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 93 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 152
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 153 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 212
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 213 SGSLSPEHGPVVVHS 227
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 93 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 152
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 153 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 212
Query: 157 S---TPTSQLSVVH 167
S +P VVH
Sbjct: 213 SGSLSPEHGPVVVH 226
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +K +Y+P + + +F N+
Sbjct: 87 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKWAQYWPQKEEKEMIFEDTNL 146
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 147 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 206
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 207 SGSLSPEHGPVVVHC 221
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ S++T L + E E+ HFH + DF +P P +NF VR
Sbjct: 141 KLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTFPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVHC
Sbjct: 201 SGSLSPEHGPVVVHC 215
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G+++ EYIA QGP +T DFW MVLQ + IVML EK RVKC+
Sbjct: 86 SDYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 145
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIP-- 141
Y+P + + +I V +E + + RI+ EV +V HF+ W D +P
Sbjct: 146 YWP-FTEDPIAYGDITVEMLSEEEHTDWVYRNFRISYADEVQDVMHFNYTAWPDHGVPTA 204
Query: 142 GGPDVLVNFCHLVRNSTPTSQ-LSVVHC 168
+ ++ F +VR + S+ ++HC
Sbjct: 205 NAAESILQFVQMVRQKSVKSKGPMIIHC 232
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G+ + ++IAAQGPK +TV DFW M+ + IVM+ + E+ KC
Sbjct: 81 PDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKC 140
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVK------HFHLHDW 135
+Y+PD+ + + N+RV + V +T I + +V K FH W
Sbjct: 141 AQYWPDQ--GCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSW 198
Query: 136 QDFSIPGGPDVLVNFCHLVRNSTPT-SQLSVVHC 168
DF +P P ++ F V+ P + VVHC
Sbjct: 199 PDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHC 232
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHS 215
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF--NNI 98
YI QGP +T FW MV + + +VML +EKG +KC +Y+P + + +F N+
Sbjct: 81 YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL 140
Query: 99 RVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN 156
++ +++ +++T L + E E+ HFH W DF +P P +NF VR
Sbjct: 141 KLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRE 200
Query: 157 S---TPTSQLSVVHC 168
S +P VVH
Sbjct: 201 SGSLSPEHGPVVVHS 215
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 23 KADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
+ D + + G+ + YI QGP +T DFW MV + +V+ IVM F E GR KC
Sbjct: 79 QTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCG 138
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRI--TRDSEVLEVKHFHLHDWQDFSI 140
+Y+P + F + V E +H+ T L I T + + +V HF W D+ +
Sbjct: 139 QYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGV 198
Query: 141 PGGPDVLVNFCHLVRN 156
P L++F +VRN
Sbjct: 199 PSSAASLIDFLRVVRN 214
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G+ + YIA QGP +T DFW MV + + IVM+ EK R+KC++
Sbjct: 83 SDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQ 142
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGG 143
Y+P+R E + F + + T + L SE EV+ F W D +P
Sbjct: 143 YWPNRGTETYGFIQVTLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEY 202
Query: 144 PDVLVNFCHLVRN-STPTSQLSVVHC 168
P + F V+ + P + VVHC
Sbjct: 203 PTPFLAFLRRVKTCNPPDAGPIVVHC 228
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVN--- 90
G+ + YIA QGP A+T DFW M+ ++ +VML E GR KC +Y+P +
Sbjct: 382 GYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARY 441
Query: 91 EYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF 150
+YFV + + Q + T RD + V+ F DW + +P + ++F
Sbjct: 442 QYFVVDPMAEYNMPQYILREFKVTD---ARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDF 498
Query: 151 CHLV 154
V
Sbjct: 499 IGQV 502
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G+ + YIA QGP +T+ DFW MV + + +VM+ EK RVKC
Sbjct: 69 PGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKC 128
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIP 141
++Y+P R E + + T + L + SE E++ F W D +P
Sbjct: 129 DQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVP 188
Query: 142 GGPDVLVNFCHLVRNSTPT-SQLSVVHC 168
P ++ F V+ P + VVHC
Sbjct: 189 EYPTPILAFLRRVKACNPLDAGPMVVHC 216
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVN--- 90
G+ + YIA QGP A++ DFW M+ +H IVML E GR KC +Y+P +
Sbjct: 370 GYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARY 429
Query: 91 EYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF 150
+YFV + + Q + T RD + ++ F DW + +P + ++F
Sbjct: 430 QYFVVDPMAEYNMPQYILREFKVTD---ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDF 486
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G + EYI QGP T DFW MV + V IVM+ VEKGRVKC
Sbjct: 77 PCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKC 136
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE---VKHFHLHDWQDF 138
+ Y+P + + + ++ + + V T +I + ++ ++HFH W D
Sbjct: 137 DHYWPADQDSLY-YGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDH 195
Query: 139 SIPGGPDVLVNFCHLVR---NSTPTSQLSVVHC 168
+P L+ F VR N +P + +VVHC
Sbjct: 196 GVPETTQSLIQFVRTVRDYINRSPGAGPTVVHC 228
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 38 EAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFP-DRVNEYFVFN 96
+ YI QGP +T FW MV Q + +VML VEK VKC +Y+P D F
Sbjct: 80 QRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKET 139
Query: 97 NIRVGCTEQEVGSHHTCTHLRI--TRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLV 154
V ++V S++T L++ E + HFH W DF +P P +NF V
Sbjct: 140 GFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKV 199
Query: 155 RNS---TPTSQLSVVHC 168
R S P +V+HC
Sbjct: 200 RESGSLNPDHGPAVIHC 216
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G + EYI QGP T DFW MV + V IVM+ VEKGRVKC
Sbjct: 93 PCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKC 152
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE---VKHFHLHDWQDF 138
+ Y+P + + + ++ + + V T +I + ++ ++HFH W D
Sbjct: 153 DHYWPADQDSLY-YGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDH 211
Query: 139 SIPGGPDVLVNFCHLVR---NSTPTSQLSVVHC 168
+P L+ F VR N +P + +VVHC
Sbjct: 212 GVPETTQSLIQFVRTVRDYINRSPGAGPTVVHC 244
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G YIA QGP + T+ DFW M+ ++ V+ IVM C E G+ KCE+Y+ +
Sbjct: 111 GVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQL 170
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF--- 150
F V C ++ S + L++ +SE + FH +W D +P D ++
Sbjct: 171 EFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWD 230
Query: 151 --CHLVRNSTPTSQLSVVHC 168
C+ +S P +HC
Sbjct: 231 VRCYQEDDSVPI----CIHC 246
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G YIA QGP + T+ DFW M+ ++ V+ IVM C E G+ KCE+Y+ +
Sbjct: 92 GVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQL 151
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHL 153
F V C ++ S + L++ +SE + FH +W D +P D ++
Sbjct: 152 EFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWD 211
Query: 154 VRNSTPTSQLSV-VHC 168
VR + + +HC
Sbjct: 212 VRCYQEDDSVPICIHC 227
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G YIA QGP + T+ DFW M+ ++ V+ IVM C E G+ KCE+Y+ +
Sbjct: 92 GVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQL 151
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHL 153
F V C ++ S + L++ +SE + FH +W D +P D ++
Sbjct: 152 EFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWD 211
Query: 154 VRNSTPTSQLSV-VHC 168
VR + + +HC
Sbjct: 212 VRCYQEDDSVPICIHC 227
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G YIA QGP + T+ DFW M+ ++ V+ IVM C E G+ KCE+Y+ +
Sbjct: 111 GVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQL 170
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHL 153
F V C ++ S + L++ +SE + FH +W D +P D ++
Sbjct: 171 EFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWD 230
Query: 154 VR 155
VR
Sbjct: 231 VR 232
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G + EYI QGP T DFW MV + V IVM+ VEKGRVKC+
Sbjct: 76 SDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDH 135
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE---VKHFHLHDWQDFSI 140
Y+P + + + ++ + + V T +I + ++ ++HFH W D +
Sbjct: 136 YWPADQDSLY-YGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGV 194
Query: 141 PGGPDVLVNFCHLVR---NSTPTSQLSVVHC 168
P L+ F VR N +P + +VVHC
Sbjct: 195 PETTQSLIQFVRTVRDYINRSPGAGPTVVHC 225
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D + + G+ + ++IAAQGPK +TV DFW MV + + IVML + E+ KC
Sbjct: 80 PCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKC 139
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHT----CTHLRITRDSEVLE-VKHFHLHDWQ 136
+Y+PD+ + + NIRV + V +T C ++ + V H W
Sbjct: 140 HQYWPDQ--GCWTYGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWP 197
Query: 137 DFSIPGGPDVLVNFCHLVRNSTPT-SQLSVVHC 168
DF +P P ++ F V+ P + VVHC
Sbjct: 198 DFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHC 230
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDR--VNE 91
G+ + +IA QGP A TV DFW M+ + + IVML E+ + KC +Y+P V
Sbjct: 384 GYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTEGSVTH 443
Query: 92 YFVFNNIRVGCTEQEVGSHH---TCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLV 148
+ I+ + + T + + +V V+ FH H W + IP ++
Sbjct: 444 GEITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVRVVRQFHFHGWPEIGIPAEGKGMI 503
Query: 149 NFCHLVRN 156
+ V+
Sbjct: 504 DLIAAVQK 511
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G+ + YIA+QGP T+ DFW M+ + + IVML E+G+ KC +Y+P +
Sbjct: 47 GYRQKDSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPS--DGLV 104
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRI--TRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFC 151
+ +I V ++E +T L + TR+++ +++ FH H W + IP ++N
Sbjct: 105 SYGDITVELKKEEECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINII 164
Query: 152 HLVRNSTPTS--QLSVVHC 168
V+ S VHC
Sbjct: 165 AAVQKQQQQSGNHPITVHC 183
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
G YIA QGP + T+ DFW M+ ++ V+ IVM C E G+ KCE+Y+ +
Sbjct: 92 GVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQL 151
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHL 153
F V C ++ S + L++ +SE + FH +W +P D ++
Sbjct: 152 EFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPAHDVPSSIDPILELIWD 211
Query: 154 VR 155
VR
Sbjct: 212 VR 213
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 22 PKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKC 81
P +D V + G+ + YIA QG +T DFW M+ + + +VM+ E+ RVKC
Sbjct: 78 PGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKC 137
Query: 82 EKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIP 141
++Y+P R E + + T + L SE EV+ F W D +P
Sbjct: 138 DQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVP 197
Query: 142 GGPDVLVNFCHLVRN-STPTSQLSVVHC 168
P + F V+ + P + VVHC
Sbjct: 198 EHPTPFLAFLRRVKTCNPPDAGPMVVHC 225
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDR--VNEYFVFNNI 98
YIA QG +TV DFW MV Q IVM VE+G+ KC KY+PD + EY V +
Sbjct: 114 YIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGV---M 170
Query: 99 RVGCTEQEVGSHHTCTHLRITR---DSEVLEVKHFHLHDWQDFSIPGGPDVLVNF---CH 152
RV ++ +T L++++ + V +H W D +P P +++F H
Sbjct: 171 RVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVH 230
Query: 153 LVRNSTPTSQLSVVHC 168
+ S + VVHC
Sbjct: 231 HKQESIMDAGPVVVHC 246
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDR--VNEYFVFNNI 98
YIA QG +TV DFW MV Q IVM VE+G+ KC KY+PD + EY V +
Sbjct: 327 YIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGV---M 383
Query: 99 RVGCTEQEVGSHHTCTHLRITR---DSEVLEVKHFHLHDWQDFSIPGGPDVLVNF---CH 152
RV ++ +T L++++ + V +H W D +P P +++F H
Sbjct: 384 RVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVH 443
Query: 153 LVRNSTPTSQLSVVHC 168
+ S + VVHC
Sbjct: 444 HKQESIMDAGPVVVHC 459
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDR--VNEYFVFNNI 98
YIA QG +TV DFW MV Q IVM VE+G+ KC KY+PD + EY V +
Sbjct: 67 YIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGV---M 123
Query: 99 RVGCTEQEVGSHHTCTHLRITR---DSEVLEVKHFHLHDWQDFSIPGGPDVLVNF---CH 152
RV ++ +T L++++ + V +H W D +P P +++F H
Sbjct: 124 RVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVH 183
Query: 153 LVRNSTPTSQLSVVHC 168
+ S + VVHC
Sbjct: 184 HKQESIMDAGPVVVHC 199
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 96 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 154
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E +VKH W D P
Sbjct: 155 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRDVKHILFSAWPDHQTPE 211
Query: 143 GPDVLVNFCHLVRNSTPTSQLS---VVHC 168
L+ V S T+ VVHC
Sbjct: 212 SAGPLLRLVAEVEESPETAAHPGPIVVHC 240
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 10 FSNEAEYIAAQGPKAD----TVADFWTMGFSNEA-EYIAAQGPKADTVADFWTMVLQHQV 64
+ N Y A + P D A F + E YIA QGP TV DFW M+ + +
Sbjct: 81 YKNILPYDATRVPLGDEGGYINASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKS 140
Query: 65 VKIVMLCSFVEKGRVKCEKYFPDRVNE-YFVFNNIRVGCT--EQEVGSHHTCTHLRITRD 121
I M+ VE ++KC++Y+P+ + + V N +R+ +Q G L +
Sbjct: 141 TVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSNRLRLALVRMQQLKGFVVRAMTLEDIQT 200
Query: 122 SEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHC 168
EV + H + W D P PD L+ F +R+ + + + HC
Sbjct: 201 REVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHIHRSGPI-ITHC 246
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 95 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 153
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W D P
Sbjct: 154 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE 210
Query: 143 GPDVLVNFCHLVRNSTPTSQLS---VVHC 168
L+ V S T+ VVHC
Sbjct: 211 SAGPLLRLVAEVEESPETAAHPGPIVVHC 239
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 96 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 154
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W D P
Sbjct: 155 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE 211
Query: 143 GPDVLVNFCHLVRNSTPTSQLS---VVHC 168
L+ V S T+ VVHC
Sbjct: 212 SAGPLLRLVAEVEESPETAAHPGPIVVHC 240
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 85 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 143
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W D P
Sbjct: 144 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE 200
Query: 143 GPDVLVNFCHLVRNSTPTSQLS---VVHC 168
L+ V S T+ VVHC
Sbjct: 201 SAGPLLRLVAEVEESPETAAHPGPIVVHC 229
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 14 AEYIAAQGPKADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSF 73
A Y+ + P A+ V +YIA QGP T A FW +V ++ IVML +
Sbjct: 72 ASYVNMEIPAANLVN-----------KYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTL 120
Query: 74 VEKGRVKCEKYFPDRVNEYFVFN--NIRVGCTEQEVGSHHTCTHLRI--TRDSEVLEVKH 129
E+GR KC +Y+PD + V N + C ++ + + + T+ E V H
Sbjct: 121 TERGRTKCHQYWPDPPD---VMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTH 177
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHC 168
W D +P + F + VR+ S+ +VHC
Sbjct: 178 LQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHC 216
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + IVM+ + VEKGR KC++
Sbjct: 97 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQ 156
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P +E + NI V ++ + +T I R+++V + V
Sbjct: 157 YWPTENSEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 213
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D +P ++ F VR S+ P + +VHC
Sbjct: 214 YHYTQWPDMGVPEYALPVLTF---VRRSSAARMPETGPVLVHC 253
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + IVM+ + VEKGR KC++
Sbjct: 79 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQ 138
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P +E + NI V ++ + +T I R+++V + V
Sbjct: 139 YWPTENSEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 195
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D G P+ + VR S+ P + +VHC
Sbjct: 196 YHYTQWPDM---GVPEYALPVLTFVRRSSAARMPETGPVLVHC 235
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 25 DTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLC---SFVEKGRVKC 81
D + + MG+ E+I Q P T DFW M+ H IVML S E V
Sbjct: 379 DYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFV-- 436
Query: 82 EKYFPDRVN----EYFVFNNI---RVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHD 134
Y+P R E F I R+ + +E H L T+D VLEV+HF
Sbjct: 437 --YWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFI-LEATQDDYVLEVRHFQCPK 493
Query: 135 WQDFSIP 141
W + P
Sbjct: 494 WPNPDAP 500
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + IVM+ + VEKGR KC++
Sbjct: 87 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQ 146
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P +E + NI V ++ + +T I R+++V + V
Sbjct: 147 YWPTENSEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 203
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D G P+ + VR S+ P + +VHC
Sbjct: 204 YHYTQWPDM---GVPEYALPVLTFVRRSSAARMPETGPVLVHC 243
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + IVM+ + VEKGR KC++
Sbjct: 86 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQ 145
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P +E + NI V ++ + +T I R+++V + V
Sbjct: 146 YWPTENSEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 202
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D +P ++ F VR S+ P + +VHC
Sbjct: 203 YHYTQWPDMGVPEYALPVLTF---VRRSSAARMPETGPVLVHC 242
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + IVM+ + VEKGR KC++
Sbjct: 86 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQ 145
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P E + NI V ++ + +T I R+++V + V
Sbjct: 146 YWPTENTEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 202
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D G P+ + VR S+ P + +VHC
Sbjct: 203 YHYTQWPDM---GVPEYALPVLTFVRRSSAARMPETGPVLVHC 242
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW M+ + I+M+ + VEKGR KC++
Sbjct: 86 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIIMITNLVEKGRRKCDQ 145
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P E + NI V ++ + +T I R+++V + V
Sbjct: 146 YWPTENTEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 202
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D G P+ + VR S+ P + +VHC
Sbjct: 203 YHYTQWPDM---GVPEYALPVLTFVRRSSAARMPETGPVLVHC 242
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 96 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 154
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W D P
Sbjct: 155 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE 211
Query: 143 GPDVLVNFCHLVRNSTPTS 161
L+ V S T+
Sbjct: 212 SAGPLLRLVAEVEESPETA 230
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 95 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 153
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W D P
Sbjct: 154 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPE 210
Query: 143 GPDVLVNFCHLVRNSTPTS 161
L+ V S T+
Sbjct: 211 SAGPLLRLVAEVEESPETA 229
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 96 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 154
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W P
Sbjct: 155 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPAHQTPE 211
Query: 143 GPDVLVNFCHLVRNSTPTSQLS---VVHC 168
L+ V S T+ VVHC
Sbjct: 212 SAGPLLRLVAEVEESPETAAHPGPIVVHC 240
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 34 GFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYF 93
GF +YIAAQGP+ +TV DFW + + + IV + E R KC +Y+P
Sbjct: 92 GFKEPRKYIAAQGPRDETVDDFWRXIWEQKATVIVXVTRCEEGNRNKCAEYWPSXEEGTR 151
Query: 94 VFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL---EVKHFHLHDWQDFSIPGGPDVLVNF 150
F ++ V + + + L I E EV H W D +P P +L+
Sbjct: 152 AFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKL 211
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 42 IAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVFNNIRVG 101
IAAQGP +T+ DFW + Q +V IV L + C +Y+ + Y +I V
Sbjct: 410 IAAQGPLKETIGDFWQXIFQRKVKVIVXLTELKHGDQEICAQYWGEGKQTY---GDIEVD 466
Query: 102 CTEQEVGSHHTCT--HLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTP 159
+ + S +T LR ++ + V + +W +P P L++ +V+ P
Sbjct: 467 LKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISXIQVVKQKLP 526
Query: 160 TSQLS-----------VVHCR 169
S ++HCR
Sbjct: 527 QKNSSEGNKHHKSTPLLIHCR 547
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVFNNIRV 100
YIA QGP TVADFW MV + V IVML E G +C Y+PD + + + +
Sbjct: 103 YIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVRQCYHYWPDEGSNLYHIYEVNL 162
Query: 101 GCTEQEVGSHHTCT-------HLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF 150
V H C +L+ + +E V FH W D +P L++F
Sbjct: 163 ------VSEHIWCEDFLVRSFYLKNLQTNETRTVTQFHFLSWYDRGVPSSSRSLLDF 213
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 24 ADTVADFWTMGF-SNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCE 82
D + + G+ E YIA QGP +TV+DFW MV Q +V IVML E G+ KC
Sbjct: 96 GDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCV 154
Query: 83 KYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPG 142
Y+P Y F IR+ + + +T L I E VKH W P
Sbjct: 155 HYWPTEEETYGPF-QIRI--QDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPAHQTPE 211
Query: 143 GPDVLVNFCHLVRNSTPTS 161
L+ V S T+
Sbjct: 212 SAGPLLRLVAEVEESPETA 230
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 40 EYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVFNNIR 99
+YIA QGP T DFW M + +VML + VE+GRVKC +Y+P+ + +
Sbjct: 114 QYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSS-SYGCYQ 172
Query: 100 VGCTEQEVGSHHTCTHLRI--TRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF-CHLVRN 156
V C +E + + + + +E + W D +P ++F CH+
Sbjct: 173 VTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNK 232
Query: 157 STPTSQLSVVHC 168
+ VVHC
Sbjct: 233 RAGKEEPVVVHC 244
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 31 WTMGFS-NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRV 89
+ G+S E +IA QGP +TV DFW MV Q IVM+ EK KC Y+P++
Sbjct: 92 YIRGYSGKEKAFIATQGPMINTVNDFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWPEKR 150
Query: 90 NEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVN 149
Y + G TE + ++T +L + + S VKH+ W D P L+
Sbjct: 151 GIYGKVEVLVTGVTECD---NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQ 207
Query: 150 FCHLVRNSTPTSQLS---VVHC 168
V S+ VVHC
Sbjct: 208 LMLDVEEDRLASEGRGPVVVHC 229
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G YIA QGP T+ DFW +V + V I+M C +E GR +CE+
Sbjct: 88 SDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRKRCER 147
Query: 84 YFPDRVNE----YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFS 139
Y+ F I+ E+ + L++T E V W D
Sbjct: 148 YWAQEQEPLQTGLFCITLIK----EKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRG 203
Query: 140 IPGGPD---VLVNFCHLVRNSTPTSQLSVVHC 168
+P PD +V ++ S P + VHC
Sbjct: 204 VPSSPDHMLAMVEEARRLQGSGP--EPLCVHC 233
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 24 ADTVADFWTMGFSNEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEK 83
+D + + G++ YIA QGP T DFW + + IV + + VEKGR KC++
Sbjct: 87 SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRXIWEQNTGIIVXITNLVEKGRRKCDQ 146
Query: 84 YFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLE--------------VKH 129
Y+P +E + NI V ++ + +T I R+++V + V
Sbjct: 147 YWPTENSEE--YGNIIVTLKSTKIHACYTVRRFSI-RNTKVKKGQKGNPKGRQNERVVIQ 203
Query: 130 FHLHDWQDFSIPGGPDVLVNFCHLVRNST----PTSQLSVVHC 168
+H W D G P+ + VR S+ P + +VHC
Sbjct: 204 YHYTQWPDX---GVPEYALPVLTFVRRSSAARXPETGPVLVHC 243
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 22 PKADTVADFWTMGFSNEAE-YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVK 80
P + + + G+ E + YIA QGP TVADFW MV Q IVM+ + +E+ K
Sbjct: 91 PLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITN-IEEMNEK 149
Query: 81 CEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSI 140
C +Y+P+ E ++ + + + + + + +E +KH+ W D
Sbjct: 150 CTEYWPE---EQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQKT 206
Query: 141 PGGPDVLVNFCHLVRNSTPTSQLSVVHC 168
PD HLVR +Q HC
Sbjct: 207 ---PDRAPPLLHLVREVEEAAQQEGPHC 231
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 22 PKADTVADFWTMGFSNEAE-YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVK 80
P + + + G+ E + YIA QGP TVADFW MV Q IVM+ + +E+ K
Sbjct: 91 PLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITN-IEEMNEK 149
Query: 81 CEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSI 140
C +Y+P+ E ++ + + + + + + +E +KH+ W D
Sbjct: 150 CTEYWPE---EQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQKT 206
Query: 141 PGGPDVLVNFCHLVRNSTPTSQLSVVHC 168
PD HLVR +Q HC
Sbjct: 207 ---PDRAPPLLHLVREVEEAAQQEGPHC 231
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 22 PKADTVADFWTMGFSNEAE-YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVK 80
P + + + G+ E + YIA QGP TVADFW MV Q IVM+ + +E+ K
Sbjct: 70 PLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITN-IEEMNEK 128
Query: 81 CEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSI 140
C +Y+P+ E ++ + + + + + + +E +KH+ W D
Sbjct: 129 CTEYWPE---EQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQKT 185
Query: 141 PGGPDVLVNFCHLVRNSTPTSQLSVVHC 168
PD HLVR +Q HC
Sbjct: 186 ---PDRAPPLLHLVREVEEAAQQEGPHC 210
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 97 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 156
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 157 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 211
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VHC
Sbjct: 212 FLDQINQRQESLPHAGPIIVHC 233
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 75 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 134
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 135 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 189
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VHC
Sbjct: 190 FLDQINQRQESLPHAGPIIVHC 211
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 317 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 376
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 377 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 431
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VHC
Sbjct: 432 FLDQINQRQESLPHAGPIIVHC 453
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 31 WTMGFS-NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRV 89
+ G+S E +IA QGP +TV DFW MV Q IVM+ EK KC Y+P++
Sbjct: 79 YIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWPEKR 137
Query: 90 NEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVN 149
Y + + E + ++T +L + + S VKH+ W D P L+
Sbjct: 138 GIYGKVEVLVISVNECD---NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQ 194
Query: 150 FCHLVRNSTPTSQLS---VVHC 168
V SQ VVHC
Sbjct: 195 LMLDVEEDRLASQGRGPVVVHC 216
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVFNNIRV 100
YIA QGP + T+ADFW MV + IVML VE G +C++Y+PD + + +
Sbjct: 102 YIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDRYWPDEGASLYHVYEVNL 161
Query: 101 GCTEQEVGSHHTCT-------HLRITRDSEVLEVKHFHLHDWQDFSIPGGPDVLVNF 150
V H C +L+ + E + FH W P L++F
Sbjct: 162 ------VSEHIWCEDFLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRPLLDF 212
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 77 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 136
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 137 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 191
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VH
Sbjct: 192 FLDQINQRQESLPHAGPIIVHS 213
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 75 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 134
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 135 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 189
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VH
Sbjct: 190 FLDQINQRQESLPHAGPIIVHS 211
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 37 NEAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPD-----RVNE 91
N YIA+QG TV DFW M Q IVM VEKGR KC Y+P+
Sbjct: 317 NAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP 376
Query: 92 YFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVL--EVKHFHLHDWQDFSIPGGPDVLVN 149
Y V N C E + + T D+ L E+ H+ W D +P P +++
Sbjct: 377 YSVTN-----CGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLS 431
Query: 150 FCHLV---RNSTPTSQLSVVHC 168
F + + S P + +VH
Sbjct: 432 FLDQINQRQESLPHAGPIIVHS 453
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 40 EYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDR--VNEYFVFNN 97
+++A Q P + DF M+ + ++ ++M+ E G VK ++Y+P+ V N
Sbjct: 89 KFVACQAPVVQGIPDFLAMLYEKKISLVIMVTKLEEGGFVKADRYWPEERGSGSIAVSGN 148
Query: 98 IRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHD--------WQDFSIPGGPDVLVN 149
+ +E ++ L+ITR +L+ H W D IP L
Sbjct: 149 CGLTISEDPGKAYEVEDELKITRRYLILQRADEPPHKFTQVQYTGWPDHGIPQSATSLEA 208
Query: 150 FCHLVRNSTPTSQLSVVHC 168
V+NS PT+ VVHC
Sbjct: 209 LLTNVKNS-PTTVPVVVHC 226
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 41 YIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEYFVF---NN 97
++A Q P V DF + + +V +VML E G +K E+Y+P+ + F +
Sbjct: 92 FVACQAPVPQGVPDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPEEEEDSLSFPESGH 151
Query: 98 IRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLH--------DWQDFSIPGGPDVLVN 149
+ T S+ L I R V+ V +H W D +P
Sbjct: 152 DAIKVTRDAEASYEVDAELDIVRRPLVIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDE 211
Query: 150 FCHLVRNSTPTSQLSVVHC 168
+++N TS + +VHC
Sbjct: 212 LLSVIKNCVTTSPI-LVHC 229
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 38 EAEYIAAQGPKADTVADFWTMVLQHQVVKIVMLCSFVEKGRVKCEKYFPDRVNEY--FVF 95
E YIA QGP T DFW MV + V I M+ + E GR K +Y+P +++ +
Sbjct: 114 EWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSATY 173
Query: 96 NNIRVGCTEQEVGSHHTCTHLRITR--DSEVLEVKHFHLHDWQDFSIP 141
+V + + T L++ + V H DW D P
Sbjct: 174 GKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCP 221
>pdb|3SOL|A Chain A, Crystal Structure Of The Type 2 Secretion System Pilotin
Gsps
Length = 94
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 59 VLQHQVVKIVMLCSFVEKGRVKCEKY-FPDRVNEYFVFNNIRVG-----CTEQEVGSHHT 112
+ Q+ ++ + S +++C + PD + V N I +G T++++ H
Sbjct: 2 AMSEQLEQMASIVSATRYLKMRCNRSDLPDEQSILNVANRIAIGKGWQSLTQEDIRKHSD 61
Query: 113 CTHLRITRDS--EVLEVKHFH 131
++R+TRDS E ++ + F+
Sbjct: 62 DIYVRLTRDSTPEYIKCREFN 82
>pdb|2YWE|A Chain A, Crystal Structure Of Lepa From Aquifex Aeolicus
pdb|2YWF|A Chain A, Crystal Structure Of Gmppnp-Bound Lepa From Aquifex
Aeolicus
pdb|2YWH|A Chain A, Crystal Structure Of Gdp-Bound Lepa From Aquifex Aeolicus
Length = 600
Score = 27.7 bits (60), Expect = 3.3, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 43 AAQGPKADTVADFWTMVLQHQVV 65
A+QG +A TVA+FW V Q V+
Sbjct: 106 ASQGIEAQTVANFWKAVEQDLVI 128
>pdb|2YWG|A Chain A, Crystal Structure Of Gtp-Bound Lepa From Aquifex Aeolicus
Length = 600
Score = 27.7 bits (60), Expect = 3.3, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 43 AAQGPKADTVADFWTMVLQHQVV 65
A+QG +A TVA+FW V Q V+
Sbjct: 106 ASQGIEAQTVANFWKAVEQDLVI 128
>pdb|2X24|A Chain A, Bovine Acc2 Ct Domain In Complex With Inhibitor
pdb|2X24|B Chain B, Bovine Acc2 Ct Domain In Complex With Inhibitor
Length = 793
Score = 27.3 bits (59), Expect = 4.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 126 EVKHFHLHDWQDFSIPGGPDVLVNFCHLV-RNSTPTSQLSVVHCRHL 171
E+KH W D P P + + +L ++ T S L+ VHC+H+
Sbjct: 175 EIKHMFQVAWVD---PEDPHKGIKYLYLTPQDYTRISSLNSVHCKHV 218
>pdb|1O99|A Chain A, Crystal Structure Of The S62a Mutant Of Phosphoglycerate
Mutase From Bacillus Stearothermophilus Complexed With
2-Phosphoglycerate
Length = 511
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 81 CEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSI 140
C +F + V Y F + T EV S H LRI + V F + ++
Sbjct: 294 CLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVT-FFMSGGREEEF 352
Query: 141 PGGPDVLVN 149
PG +L+N
Sbjct: 353 PGEDRILIN 361
>pdb|1EJJ|A Chain A, Crystal Structural Analysis Of Phosphoglycerate Mutase
Cocrystallized With 3-Phosphoglycerate
pdb|1EQJ|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Bacillus
Stearothermophilus Complexed With 2-Phosphoglycerate
pdb|1O98|A Chain A, 1.4a Crystal Structure Of Phosphoglycerate Mutase From
Bacillus Stearothermophilus Complexed With
2-Phosphoglycerate
Length = 511
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 81 CEKYFPDRVNEYFVFNNIRVGCTEQEVGSHHTCTHLRITRDSEVLEVKHFHLHDWQDFSI 140
C +F + V Y F + T EV S H LRI + V F + ++
Sbjct: 294 CLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVT-FFMSGGREEEF 352
Query: 141 PGGPDVLVN 149
PG +L+N
Sbjct: 353 PGEDRILIN 361
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.136 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,662,224
Number of Sequences: 62578
Number of extensions: 217083
Number of successful extensions: 804
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 220
length of query: 178
length of database: 14,973,337
effective HSP length: 92
effective length of query: 86
effective length of database: 9,216,161
effective search space: 792589846
effective search space used: 792589846
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 48 (23.1 bits)