RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12349
(205 letters)
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 153 bits (389), Expect = 2e-46
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVV 95
Y++ + E V H W D +P + F + VR+ S+ +V
Sbjct: 155 IAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLV 214
Query: 96 HCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIAS 155
HCSAG+GRTG + + + + N + V +R+QRA MVQ+ +QY ++ ++I
Sbjct: 215 HCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILR 274
Query: 156 ALESSDT 162
E
Sbjct: 275 VYEEGLV 281
Score = 41.8 bits (99), Expect = 5e-05
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIKDS 51
N +KN D DTTRV L + DYINAS++
Sbjct: 44 NLDKNRYKDVLPYDTTRVLL----QGNEDYINASYVNME 78
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 152 bits (385), Expect = 1e-45
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
S Y I E + HFH W DF +P P +NF VR S +
Sbjct: 152 SYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGP 211
Query: 94 -VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQS 152
V+HCSAG+GR+GT+ D L ++ +NI + +L++R+ R ++Q+ Q + Y +
Sbjct: 212 AVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMA 271
Query: 153 IASALESSDTL-----KLKSGDSSPSTPSKDDTPPFQNRTAEFN 191
I + + K +P+ D +P + T ++N
Sbjct: 272 IIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPN-KIMTEKYN 314
Score = 41.9 bits (99), Expect = 5e-05
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIK 49
N N+N D D +RV L ++++DYINAS +
Sbjct: 42 NRNRNRYRDVSPYDHSRVKL---QNAENDYINASLVD 75
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 149 bits (378), Expect = 4e-45
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
Y ++++ +++ FH H W + IP ++N V+ S
Sbjct: 120 ESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGNHPI 179
Query: 94 VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSI 153
VHCSAG GRTGT+ A +L+ ++ L++F+TV LR QR HMVQ+ QY + Y+ +
Sbjct: 180 TVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVV 239
Query: 154 ASALESSDT 162
+++
Sbjct: 240 QEYIDAFSD 248
Score = 42.6 bits (101), Expect = 3e-05
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIK 49
N KN + RV + ++ ++DY+NASFI
Sbjct: 9 NMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFID 46
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 150 bits (380), Expect = 1e-44
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVV 95
++ + I+ EV + H + W D P PD L+ F +R+ + + +
Sbjct: 186 KGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHIHRSGPI-IT 244
Query: 96 HCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIAS 155
HCSAG+GR+GT I D++L + + +I V +R QR MVQ+E QY++ YQ I
Sbjct: 245 HCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGMVQTEDQYIFCYQVILY 304
Query: 156 ALESSDT 162
L
Sbjct: 305 VLTRLQA 311
Score = 41.5 bits (98), Expect = 7e-05
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIKDSEVLEVKHF 59
N KN + D TRVPL + YINASFIK E +
Sbjct: 75 NRRKNRYKNILPYDATRVPL----GDEGGYINASFIKIPVGKEEFVY 117
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 148 bits (376), Expect = 5e-44
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
Y + + V H DW D P +++ +++ +
Sbjct: 187 VCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLE 246
Query: 94 ---------VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEA 144
VVHCSAGVGRTG I +L++ CL+HN K+ + + LREQR M+Q+ A
Sbjct: 247 GTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLLREQRMFMIQTIA 306
Query: 145 QYVYLYQSIASALESSDTL 163
QY ++YQ + L++S +
Sbjct: 307 QYKFVYQVLIQFLQNSRLI 325
Score = 46.1 bits (110), Expect = 2e-06
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIKDSEVLEVKHF 59
N ++ + + RV L+ +++ YINAS IK H+
Sbjct: 71 NAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVVGGAEWHY 117
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 147 bits (373), Expect = 8e-44
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 38 SDSDYINASFI---KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSV 94
++ D + + + V W D +P +++N TS + +
Sbjct: 168 AELDIVRRPLVIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCVTTSPI-L 226
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRK--LNIFRTVLDLREQRAHMVQSEAQYVYLYQS 152
VHCSAG+GRTGT I L ++ ++ V ++++R MVQ QY +Y +
Sbjct: 227 VHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMVQRLEQYAVIYMT 286
Query: 153 IASALESSDT 162
+ L +
Sbjct: 287 VLGRLGVDIS 296
Score = 39.2 bits (92), Expect = 4e-04
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 9/44 (20%)
Query: 18 NNNKN-STD----DTTRVPL----LRDNSSDSDYINASFIKDSE 52
N +KN D + T P + YIN + I
Sbjct: 45 NRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLIDLDL 88
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 146 bits (371), Expect = 1e-43
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 49 KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---VVHCSAGVGRTG 105
+ ++HFH W D +P L+ F VR+ S + VVHCSAGVGRTG
Sbjct: 174 QLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTG 233
Query: 106 TYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSD 161
T+IA D +LQ L ++I+ V DLR R HMVQ+E QYVYL+Q + L +
Sbjct: 234 TFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARK 289
Score = 40.3 bits (95), Expect = 2e-04
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Query: 26 DTTRVPLLRDNSSDSDYINASFIK 49
D TRV L S SDYINAS+I
Sbjct: 66 DATRVKL----SGGSDYINASYIP 85
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 146 bits (371), Expect = 1e-43
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVR-----NSTPTS 90
++Y+ +F E+ E++ FH W D +P L+ F V+ + P
Sbjct: 157 AEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPI- 215
Query: 91 QLSVVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLY 150
VVHCSAG GRTG +IA D +L ++ ++IF V +LR QR ++VQ+E QYV+++
Sbjct: 216 ---VVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVH 272
Query: 151 QSIASALESSDT 162
+I A +T
Sbjct: 273 DAILEACLCGNT 284
Score = 42.6 bits (101), Expect = 3e-05
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIKD 50
N NKN + D +RV L + D SDYINA++I
Sbjct: 47 NRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDG 85
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 146 bits (371), Expect = 1e-43
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---- 93
DY +E +KH+ W D P L++ V +
Sbjct: 175 EDYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPI 234
Query: 94 VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSI 153
+VH SAG+GRTG +IA + Q L+ ++I +T LR+ R M+Q+ QY +++ +
Sbjct: 235 IVHSSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVM 294
Query: 154 ASALESSDT 162
+ +
Sbjct: 295 SLYEKQLSH 303
Score = 37.3 bits (87), Expect = 0.002
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 26 DTTRVPL--LRDNSSDSDYINASFIKD 50
+RV L + S YINA++I+
Sbjct: 77 PHSRVCLTSPDPDDPLSSYINANYIRG 103
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 146 bits (371), Expect = 2e-43
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-VVH 96
+D++ F+ + SE ++HFH W DF +P P LV F R+ Q VVH
Sbjct: 182 ADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVH 241
Query: 97 CSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASA 156
CSAGVGR+GT+I D +LQ + + ++IF V +R++R MVQ+E QY+ ++Q + +
Sbjct: 242 CSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAV 301
Query: 157 LESSD 161
LE +
Sbjct: 302 LEGKE 306
Score = 41.9 bits (99), Expect = 5e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Query: 18 NNNKN-----STDDTTRVPL-LRDNSSDSDYINASFIKDSE 52
N KN D +R L D+ SDYINA+++
Sbjct: 70 NRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHN 110
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 146 bits (370), Expect = 3e-43
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL-SV 94
+ YI + +E + W D +P ++F VRN + V
Sbjct: 182 TAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVV 241
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAG+GRTG I + + ++ N+ + V +R+QRA M+Q+ +QY ++ ++I
Sbjct: 242 VHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAIL 301
Query: 155 SALESSDTLKLKS 167
E L +
Sbjct: 302 KVYEEGFVKPLTT 314
Score = 41.5 bits (98), Expect = 7e-05
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIKDSE 52
N +KN D D TRV L + DYINA++I
Sbjct: 71 NISKNRYRDISPYDATRVIL----KGNEDYINANYINMEI 106
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 145 bits (367), Expect = 6e-43
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
+ Y + ++ + +V HF W D+ +P L++F +VRN + +
Sbjct: 165 NHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMG 224
Query: 94 ------------VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQ 141
VVHCSAG+GRTGT+ + D+ L L+ LN+F+TV +R QRA +Q
Sbjct: 225 ARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQ 284
Query: 142 SEAQYVYLYQSIASALESSDTLK 164
+ QY + Y++I E +
Sbjct: 285 TPEQYYFCYKAILEFAEKEGMVS 307
Score = 42.7 bits (101), Expect = 3e-05
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIKDSE 52
N KN D D TRV L R + +DYINASF+ +
Sbjct: 52 NLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYK 92
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 144 bits (365), Expect = 8e-43
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---V 94
+Y + + + S VKH+ W D P L+ V S+ V
Sbjct: 167 DNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVV 226
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAG+GRTG +IA + Q L+ ++ V LR R MVQ+ QY +++ ++
Sbjct: 227 VHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHALC 286
Query: 155 SALE--SSDTL 163
S +T+
Sbjct: 287 LFESRLSPETV 297
Score = 41.5 bits (98), Expect = 8e-05
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 26 DTTRVPLLRDNSSD--SDYINASFIKD 50
+RV L N +D S YINA++I+
Sbjct: 69 PLSRVCLRPKNITDSLSTYINANYIRG 95
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 145 bits (368), Expect = 1e-42
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
++ F ++ SE ++ FH W D +P D+L+NF +LVR+
Sbjct: 180 PEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESP 239
Query: 94 -VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQS 152
+VHCSAGVGRTGT+IA D L+ +++ ++++ V DLR R MVQ+E QYV+L Q
Sbjct: 240 ILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQC 299
Query: 153 IASALESSDTLKL 165
+ + + K+
Sbjct: 300 VLDIIRAQKDSKV 312
Score = 45.4 bits (108), Expect = 4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 26 DTTRVPLLRDNSSDSDYINASFIK 49
D +RV L S DYINA+++
Sbjct: 83 DISRVKLSVQTHSTDDYINANYMP 106
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 144 bits (365), Expect = 1e-42
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 29 RVPLLRDNSSDSDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVR 84
V L+ ++ D++ SF ++ E + FH W P L++F V
Sbjct: 158 EVNLVSEHIWCEDFLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVN 217
Query: 85 -----NSTPTSQLSVVHCSAGVGRTGTYIACDLLL-QCLQHNRKLNIFRTVLDLREQRAH 138
S P +VHCS G GRTGTYI D++L + + ++++I T+ +R+QR
Sbjct: 218 KCYRGRSCPI----IVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPG 273
Query: 139 MVQSEAQYVYLYQSIASALESSDT 162
+V+S+ Q+ + ++A + +
Sbjct: 274 LVRSKDQFEFALTAVAEEVNAILK 297
Score = 44.5 bits (106), Expect = 6e-06
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIKD 50
N KN D D R+ L + + S SDYINAS I +
Sbjct: 56 NIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIE 94
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 143 bits (362), Expect = 3e-42
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 49 KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQ-LSVVHCSAGVGRTGTY 107
+ FH W DF +P P ++ F V+ P VVHCSAGVGRTGT+
Sbjct: 183 NRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTF 242
Query: 108 IACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDT 162
+ D +L + RK++++ V +R QR MVQ++ QYV++YQ++ DT
Sbjct: 243 VVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDT 297
Score = 42.6 bits (101), Expect = 3e-05
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 18 NNNKN-----STDDTTRVPL-LRDNSSDSDYINASFIKD 50
N KN D +RV L + DSDYINASFI
Sbjct: 55 NKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFING 93
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 143 bits (363), Expect = 3e-42
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 36 NSSDSDYINASFIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQ-LSV 94
N+ + V +H W D +P ++ F + +
Sbjct: 191 NTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVL 250
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAGVGRTGTYI D +LQ ++ +N+ + +R QR ++VQ+E QY++++ ++
Sbjct: 251 VHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALL 310
Query: 155 SALESSDT 162
A+ +T
Sbjct: 311 EAILGKET 318
Score = 40.7 bits (96), Expect = 1e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 18 NNNKN-STD----DTTRVPLLR---DNSSDSDYINASFIKD 50
N +KN + D +RV L +S SDYINA+++
Sbjct: 67 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDG 107
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 143 bits (362), Expect = 4e-42
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---V 94
+Y E VKH W D P L+ V S T+ V
Sbjct: 178 PEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIV 237
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAG+GRTG +IA + Q L+ +++I V LR R M+Q+ QY +L+ ++A
Sbjct: 238 VHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 297
Query: 155 SALES 159
Sbjct: 298 LYAGQ 302
Score = 37.3 bits (87), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 26 DTTRVPL-LRDNSSDSDYINASFIKD 50
+RV L + D DYINA++I+
Sbjct: 81 PQSRVCLGRAQSQEDGDYINANYIRG 106
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 142 bits (359), Expect = 5e-42
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 51 SEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---VVHCSAGVGRTGTY 107
+ E+ H+ W D +P P +++F + + + +VH SAG+GRTGT
Sbjct: 162 DLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTI 221
Query: 108 IACDLLLQCLQHN---RKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDT 162
I D+L++ + ++I +T+ +R QR+ MVQ+EAQY ++Y +IA +E++
Sbjct: 222 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKK 279
Score = 40.0 bits (94), Expect = 2e-04
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
Query: 18 NNNKN-----STDDTTRVPL--LRDNSSDSDYINASFIKDS 51
N KN D +RV L N SDYINA++IK+
Sbjct: 28 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQ 68
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 142 bits (360), Expect = 7e-42
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 29 RVPLLRDNSSDSDYINASF--IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNS 86
+ L+++ + D + + E V W D +P PD ++ R
Sbjct: 162 CITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRL 221
Query: 87 TPTSQL-SVVHCSAGVGRTGTYIACDLLLQCLQHNR---KLNIFRTVLDLREQRAHMVQS 142
+ VHCSAG GRTG D + Q L ++F VL +R+QR VQ+
Sbjct: 222 QGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQT 281
Query: 143 EAQYVYLYQSIASALESS 160
E QY +LY ++A S+
Sbjct: 282 EEQYRFLYHTVAQMFCST 299
Score = 43.8 bits (104), Expect = 1e-05
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIKD 50
N KN D D TRV L L SDYIN +FI+
Sbjct: 60 NVRKNRYKDVLPYDQTRVILSLLQEEGHSDYINGNFIRG 98
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 147 bits (373), Expect = 8e-42
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 37 SSDSDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL 92
+ YI F +D + ++ F DW + +P + ++F V +
Sbjct: 440 YNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQ 499
Query: 93 S---VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYL 149
VHCSAGVGRTG +I ++L+ +++ +++F+TV LR QR MVQ+E QY
Sbjct: 500 DGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLC 559
Query: 150 YQSIASALESSDT 162
Y++ L S D
Sbjct: 560 YRAALEYLGSFDH 572
Score = 140 bits (356), Expect = 2e-39
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL-SV 94
+ Y +F SE E++ F W D +P P ++ F V+ P V
Sbjct: 154 ATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMV 213
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAGVGRTG +I D +L+ ++H + ++I+ V +R QR +MVQ+E QYV++++++
Sbjct: 214 VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALL 273
Query: 155 SALESSDT 162
A T
Sbjct: 274 EAATCGHT 281
Score = 42.3 bits (100), Expect = 4e-05
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIK 49
N KN + + TRV L SDYINASF+
Sbjct: 332 NKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLD 369
Score = 41.6 bits (98), Expect = 9e-05
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 18 NNNKN-STD----DTTRVPLLR-DNSSDSDYINASFIK 49
N KN + D +RV L D SDYINA++I
Sbjct: 43 NKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYID 80
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 141 bits (358), Expect = 1e-41
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL-SVVH 96
SDYI + +SE + FH +W D +P D ++ VR + +H
Sbjct: 167 SDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDDSVPICIH 226
Query: 97 CSAGVGRTGTYIACDLLLQCLQHN---RKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSI 153
CSAG GRTG A D L+ ++F + ++R QR +VQ++ QY +Y ++
Sbjct: 227 CSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAV 286
Query: 154 ASALESSDT 162
+
Sbjct: 287 LELFKRQMD 295
Score = 42.3 bits (100), Expect = 4e-05
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 26 DTTRVPL-LRDNSSDSDYINASFIKD 50
D +RV L L + DS YINA+FIK
Sbjct: 67 DYSRVELSLITSDEDSSYINANFIKG 92
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 141 bits (357), Expect = 2e-41
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 40 SDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-- 93
S Y + E E+ HFH W DF +P P +NF VR S S
Sbjct: 157 SYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGP 216
Query: 94 -VVHCSAGVGRTGTYIACDLLLQCLQHNR---KLNIFRTVLDLREQRAHMVQSEAQYVYL 149
VVHCSAG+GR+GT+ D L + + ++I + +L++R+ R ++Q+ Q +
Sbjct: 217 VVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFS 276
Query: 150 YQSIASALES 159
Y ++ +
Sbjct: 277 YLAVIEGAKF 286
Score = 42.3 bits (100), Expect = 4e-05
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 8/38 (21%)
Query: 18 NNNKN-STD----DTTRVPLLRDNSSDSDYINASFIKD 50
N N+N D D +R+ L + D+DYINAS IK
Sbjct: 46 NKNRNRYRDVSPFDHSRIKL---HQEDNDYINASLIKM 80
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 140 bits (356), Expect = 2e-41
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 40 SDYINASFI--KDSEVLEVKHFHLHDWQDFSIPGG--PDVLVNFCHLVRNSTPTSQL-SV 94
D+ F E+ +V HF+ W D +P + ++ F H+VR S+ +
Sbjct: 161 DDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTANAAESILQFVHMVRQQATKSKGPMI 220
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
+HCSAGVGRTGT+IA D LLQ ++ + ++I V ++R R MVQ+E QY++++Q +
Sbjct: 221 IHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCVQ 280
Query: 155 SALESSDT 162
Sbjct: 281 LMWMKKKQ 288
Score = 42.2 bits (100), Expect = 4e-05
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 26 DTTRVPL-LRDNSSDSDYINASFIK 49
D +RV L + +DYINA++I
Sbjct: 62 DFSRVRLVSMNEEEGADYINANYIP 86
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 140 bits (355), Expect = 4e-41
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 40 SDYINASFI-----KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS- 93
DY + + V +H W D +P P +++F V + + +
Sbjct: 181 HDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAG 240
Query: 94 --VVHCSAGVGRTGTYIACDLLLQCLQH---NRKLNIFRTVLDLREQRAHMVQSEAQYVY 148
VVHCSAG+GRTGT+I D+L+ ++ + +++ +T+ +R QR+ MVQ+EAQY +
Sbjct: 241 PVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRF 300
Query: 149 LYQSIASALES 159
+Y ++ +E+
Sbjct: 301 IYMAVQHYIET 311
Score = 40.4 bits (95), Expect = 2e-04
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 26 DTTRVPL--LRDNSSDSDYINASFIKDSEVLEVKHFH 60
D TRV L N SDYINA+ I + +
Sbjct: 73 DHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK 109
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 145 bits (367), Expect = 6e-41
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 37 SSDSDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL 92
S Y F K + V + +W +P P L++ +V+ P
Sbjct: 471 DKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNS 530
Query: 93 S-----------VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQ 141
S ++HC G +TG + A LL+ + ++IF+ V LR+ R MV
Sbjct: 531 SEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLGMVS 590
Query: 142 SEAQYVYLYQSIASALESSD 161
+ QY +LY IAS + +
Sbjct: 591 TFEQYQFLYDVIASTYPAQN 610
Score = 139 bits (353), Expect = 6e-39
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 50 DSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS-VVHCSAGVGRTGTYI 108
+ EV H W D +P P +L+ V + VVH SAGVGRTGTYI
Sbjct: 182 KATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYI 241
Query: 109 ACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDT 162
D +L+ L+ K++++ V+ LR QR MVQ EAQY+ ++Q++ + +T
Sbjct: 242 GIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQFGET 295
Score = 41.7 bits (98), Expect = 8e-05
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 18 NNNKN-----STDDTTRVPL-LRDNSSDSDYINASFIK 49
N NKN D RV L + + S+YINAS+I
Sbjct: 54 NQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYID 91
Score = 33.6 bits (77), Expect = 0.040
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 25/57 (43%)
Query: 18 NNNKN-STD----DTTRVPL--------------------LRDNSSDSDYINASFIK 49
N +KN +++ D RVPL D+ S YINASFI
Sbjct: 345 NKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINASFIM 401
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 145 bits (367), Expect = 8e-41
Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Query: 36 NSSDSDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQ 91
S++ I F +D VLEV+HF W + P ++++ T
Sbjct: 462 LSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAP--ISSTFELINVIKEEALTRD 519
Query: 92 LS-VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLY 150
+VH G G A L Q L++ +++F+ + R + QY ++Y
Sbjct: 520 GPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIY 579
Query: 151 QSIASALESSDT-LKLKSGDSSPSTPSKDDTPPFQNRTA 188
+++ S + + + + D + + D++ P ++ +
Sbjct: 580 KAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAESMES 618
Score = 136 bits (344), Expect = 1e-37
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 36 NSSDSDYINASFIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNS-TPTSQLSV 94
N+ + V +H W D +P ++ F + P + +
Sbjct: 173 NTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVL 232
Query: 95 VHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIA 154
VHCSAGVGRTGTYI D +LQ ++ +N+ + +R QR ++VQ+E QY++++ ++
Sbjct: 233 VHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALL 292
Score = 42.4 bits (100), Expect = 4e-05
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIKD 50
N KN ++ + RV L +DYINAS+I
Sbjct: 350 NKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMG 388
Score = 39.7 bits (93), Expect = 3e-04
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Query: 18 NNNKN-STD----DTTRVPLLR---DNSSDSDYINASFIK 49
N +KN + D +RV L +S SDYINA+++
Sbjct: 49 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD 88
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 144 bits (366), Expect = 9e-41
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 48 IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS--VVHCSAGVGRTG 105
+ +V V+ FH H W + IP +++ V+ + VHCSAG GRTG
Sbjct: 474 RQGEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTG 533
Query: 106 TYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDT 162
T+IA +L+ ++ L++F+ V LR QR HMVQ+ QY + Y+ + ++
Sbjct: 534 TFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSD 590
Score = 135 bits (343), Expect = 2e-37
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 40 SDYI-------NASFIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQL 92
DY V H W DF +P P ++ F V+ P
Sbjct: 165 VDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAG 224
Query: 93 -SVVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
VVHCSAGVGRTGT+I D ++ + +K+++F V +R QR MVQ++ QY ++YQ
Sbjct: 225 PIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQ 284
Query: 152 SI 153
++
Sbjct: 285 AL 286
Score = 42.7 bits (101), Expect = 4e-05
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 18 NNNKN-STD----DTTRVPL-LRDNSSDSDYINASFIK 49
N K D RV L ++ +DYINASFI
Sbjct: 346 NMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFID 383
Score = 41.6 bits (98), Expect = 1e-04
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 18 NNNKN-----STDDTTRVPLLR-DNSSDSDYINASFIK 49
N KN +D +RV L + D SDYINAS+I
Sbjct: 54 NREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYID 91
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 141 bits (356), Expect = 1e-40
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
Query: 49 KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS---------VVHCSA 99
+ + H+ +W D D L V+NS ++HC
Sbjct: 264 CGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLG 323
Query: 100 GVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQR-AHMVQSEAQYVYLYQSIASALE 158
GVGRTGT A L+ N N+ + D R+ R M++ +Q+V L A L
Sbjct: 324 GVGRTGTMAAAL----VLKDNPHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLM 379
Query: 159 SSDT 162
++ +
Sbjct: 380 TTAS 383
Score = 29.1 bits (65), Expect = 0.99
Identities = 3/46 (6%), Positives = 12/46 (26%), Gaps = 4/46 (8%)
Query: 4 MNNNNNSNNTTNNNNNNKNSTDDTTRVPLLRDNSSDSDYINASFIK 49
+ + ++ + T+V + + +N
Sbjct: 138 QTMSGPTLGLARFAVSS-IPINQQTQV---KLSDGMPVPVNTLTFD 179
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 141 bits (356), Expect = 1e-39
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 40 SDYINASFI-----KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS- 93
++Y + + E+ H+ W D +P P +++F + + +
Sbjct: 388 TEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAG 447
Query: 94 --VVHCSAGVGRTGTYIACDLLLQCLQH---NRKLNIFRTVLDLREQRAHMVQSEAQYVY 148
+VHCSAG+GRTGT I D+L++ + + ++I +T+ +R QR+ MVQ+EAQY +
Sbjct: 448 PIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKF 507
Query: 149 LYQSIASALESSDT 162
+Y +IA +E++
Sbjct: 508 IYVAIAQFIETTKK 521
Score = 76.5 bits (188), Expect = 1e-16
Identities = 15/112 (13%), Positives = 27/112 (24%), Gaps = 9/112 (8%)
Query: 48 IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS--------VVHCSA 99
+ + + W F + +F V + P + V C
Sbjct: 115 MSGGQAETLLQAKGEPW-TFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEG 173
Query: 100 GVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
G G D L ++H +K I R + +
Sbjct: 174 GRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIEN 225
Score = 42.6 bits (100), Expect = 4e-05
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 18 NNNKN-----STDDTTRVPL--LRDNSSDSDYINASFIKD 50
N KN D +RV L N SDYINA++IK+
Sbjct: 270 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKN 309
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 139 bits (352), Expect = 4e-39
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 40 SDYINASFI-----KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS- 93
DY + + V +H W D +P P +++F V + + +
Sbjct: 394 HDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAG 453
Query: 94 --VVHCSAGVGRTGTYIACDLLLQCLQH---NRKLNIFRTVLDLREQRAHMVQSEAQYVY 148
VVHCSAG+GRTGT+I D+L+ ++ + +++ +T+ +R QR+ MVQ+EAQY
Sbjct: 454 PVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRS 513
Query: 149 LYQSIASALES 159
+Y ++ +E+
Sbjct: 514 IYMAVQHYIET 524
Score = 47.5 bits (113), Expect = 8e-07
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 20/65 (30%)
Query: 94 VVHCSAG---VGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLY 150
++ C VG + + L++ ++ MV++ + L
Sbjct: 171 MIRCQELKYDVGGGERFDSLTDLVE-----------------HYKKNPMVETLGTVLQLK 213
Query: 151 QSIAS 155
Q + +
Sbjct: 214 QPLNT 218
Score = 41.8 bits (98), Expect = 8e-05
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 18 NNNKN-----STDDTTRVPL--LRDNSSDSDYINASFIKDSEVLEVKHFH 60
N NKN D TRV L N SDYINA+ I + +
Sbjct: 273 NKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK 322
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 139 bits (352), Expect = 6e-39
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 40 SDYINASFI-----KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS- 93
++Y + + E+ H+ W D +P P +++F + + +
Sbjct: 388 TEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAG 447
Query: 94 --VVHCSAGVGRTGTYIACDLLLQCLQHN---RKLNIFRTVLDLREQRAHMVQSEAQYVY 148
+VH SAG+GRTGT I D+L++ + ++I +T+ +R QR+ MVQ+EAQY +
Sbjct: 448 PIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKF 507
Query: 149 LYQSIASALESSDT-LKLKSGDSSPSTPSKDDTPPFQNRTAEFNNNTPSDM 198
+Y +IA +E++ L++ + + T P + A + S
Sbjct: 508 IYVAIAQFIETTKKKLEVLQSQKGQESEYGNITYPPAMKNAHAKASRTSSK 558
Score = 79.6 bits (196), Expect = 1e-17
Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 13/131 (9%)
Query: 33 LRDNSSDSDYINASF----IKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTP 88
L+ + SD + + + + + W F + +F V + P
Sbjct: 96 LKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW-TFLVRESLSQPGDFVLSVLSDQP 154
Query: 89 TSQLS--------VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMV 140
+ V C G G D L ++H +K I R
Sbjct: 155 KAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYY 214
Query: 141 QSEAQYVYLYQ 151
+ +
Sbjct: 215 ATRVNAADIEN 225
Score = 39.9 bits (93), Expect = 3e-04
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 18 NNNKN-----STDDTTRVPL--LRDNSSDSDYINASFIKDSEVLEVKH 58
N KN D +RV L N SDYINA++IK+ + ++
Sbjct: 270 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDEN 317
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 122 bits (309), Expect = 2e-34
Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 19/120 (15%)
Query: 49 KDSEVLEVKHFHLHDWQDFSIPGG--PDVLVNFCHLVRNSTPTSQLS------------- 93
+ + V H+ +W D + L + + S
Sbjct: 177 AGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLR 236
Query: 94 -VVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQR-AHMVQSEAQYVYLYQ 151
V+H AGVGRT I + N +L++ V +R QR MVQ + Q L +
Sbjct: 237 PVIHSRAGVGRTAQLIGAMCMN--DSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIK 294
Score = 32.4 bits (74), Expect = 0.067
Identities = 8/54 (14%), Positives = 13/54 (24%), Gaps = 14/54 (25%)
Query: 1 MELMNNNNNSNNTTNNNNNNKN-----STDDTTRVPLLRDNSSDSDYINASFIK 49
L N+ N T V +NA++I+
Sbjct: 44 NTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRA---------DLNANYIQ 88
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 90.7 bits (225), Expect = 2e-23
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 47 FIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGT 106
++ + ++ H+ D +P L L+ +VHC G+GRTGT
Sbjct: 51 YLSILKKNGLQPLHIP-IPDGGVPSDSQFLTIMKWLLSEKEGN----LVHCVGGIGRTGT 105
Query: 107 YIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
+A L+L L + + ++R R VQ+ Q ++L +
Sbjct: 106 ILASYLILT-----EGLEVESAIDEVRLVRPGAVQTYEQEMFLLR 145
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 63.2 bits (154), Expect = 4e-13
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQ 115
+ L DF P PD + F +V + + VHC+ G GRTGT +AC L+
Sbjct: 57 LTLHRLR-IPDFCPPA-PDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLV-- 112
Query: 116 CLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
R L + ++R R +++ Q ++Q
Sbjct: 113 ---KERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 145
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 55.5 bits (133), Expect = 7e-10
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQ 115
+ H D P + + +++H G+GR+ AC L
Sbjct: 101 IITHHHP-IADGGTPD-IASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLL--- 155
Query: 116 CLQHNRKLNIFRTVLDLREQRAH-MVQSEAQYVYL---YQSIASALESSDT 162
L + ++ + + LR+ R +Q+ QY YL +A+ L S D+
Sbjct: 156 -LYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKLAAHLSSRDS 205
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 49.6 bits (118), Expect = 2e-07
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQ 115
H L + D S P ++ F + N VH AG+GRTGT IAC ++
Sbjct: 240 FDHHDL-FFADGSTPT-DAIVKEFLDICEN---AEGAIAVHSKAGLGRTGTLIACYIM-- 292
Query: 116 CLQHNRKLNIFRTVLDLREQRAHMVQSEAQ-YVYLYQS 152
+ ++ T+ +R R V Q ++ + Q+
Sbjct: 293 ---KHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQT 327
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 47.6 bits (113), Expect = 3e-07
Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 11/98 (11%)
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRN--STPTSQLSVVHCSAGVGRTGTYIACDLL 113
+ + + ++P ++ F V+ L VHC+ G+ RTG + L+
Sbjct: 79 LLYKKIQ-VPGQTLPP-ESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLM 136
Query: 114 LQC-LQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLY 150
+ ++ F + R H ++ + L
Sbjct: 137 HTLGIAPQEAIDRF------EKARGHKIERQNYVQDLL 168
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 46.9 bits (111), Expect = 5e-07
Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 50 DSEVLEVKHFHLHD--WQDFSIPGGPDVLVNFCHLV--------RNSTPTSQLSVVHCSA 99
D+ +++ + +H + D + P VL ++ L+ + + VHC A
Sbjct: 60 DATLVKSRGIDVHSWPFDDGAPPT-RAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVA 118
Query: 100 GVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQ-YVYLYQ 151
G+GR +A L+ ++ + +RE+R + ++ Y+
Sbjct: 119 GLGRAPILVALALV-----EYGNVSALDAIALIREKRKGAINQTQMHWITKYK 166
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 46.6 bits (110), Expect = 1e-06
Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 8/98 (8%)
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSV--VHCSAGVGRTGTYIACDLL 113
+K+ L P + F L + + VHC+ G RTG I
Sbjct: 106 IKYIKLQCKGHGECPT-TENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICA--- 161
Query: 114 LQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
L +I V + R + L++
Sbjct: 162 --FLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFR 197
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 45.8 bits (108), Expect = 1e-06
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 50 DSEVLEVKHF--HLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQ--LSVVHCSAGVGRTG 105
D+ ++E + + D + P ++ ++ LV+ VHC AG+GR
Sbjct: 53 DTTLVEKEGIHVLDWPFDDGAPPS-NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAP 111
Query: 106 TYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQ-YVYLYQS 152
+A L+ +++ + R++R S+ Y+ Y+
Sbjct: 112 VLVALALIEGGMKYEDAVQFI------RQKRRGAFNSKQLLYLEKYRP 153
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 43.8 bits (102), Expect = 6e-06
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Query: 151 QSIASALESSDTLKLKSGDSSPS 173
Q++ L++S LKL + DS+P+
Sbjct: 20 QALKK-LQAS--LKLYADDSAPA 39
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 44.0 bits (103), Expect = 1e-05
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 52 EVLEVKHFHLHD--WQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIA 109
+++E H + D P + F + R + L HC AG GRT Y+A
Sbjct: 492 QLVEKNGLHYYRIAATDHIWPS-AANIDEFINFTRTMPANAWL-HFHCQAGAGRTTAYMA 549
Query: 110 CDLLLQ 115
+++
Sbjct: 550 MYDMMK 555
Score = 41.7 bits (97), Expect = 9e-05
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 74 DVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQ 115
D + F S P HC AG+GRT ++ +L+
Sbjct: 220 DKFLEFY----KSLPKDAWLHYHCYAGMGRTTIFMVMHDILK 257
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 42.4 bits (99), Expect = 4e-05
Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 52 EVLEVKHFHLHD--WQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIA 109
EV E D P P+ + F R + L H AGVGRT ++
Sbjct: 175 EVAEAAGMRYFRIAATDHVWPT-PENIDRFLAFYRTLPQDAWL-HFHSEAGVGRTTAFMV 232
Query: 110 CDLLLQ 115
+L+
Sbjct: 233 MTDMLK 238
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 41.2 bits (95), Expect = 1e-04
Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 3/115 (2%)
Query: 13 TTNNNNNNKNSTDDTTRVPLLRDNSSDSDYINASFIKDSEVLEVKHFHLHDWQDFSIPGG 72
++ + +N + +R + Y S E H + D ++P
Sbjct: 41 SSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPT- 99
Query: 73 PDVLVNFCHLVRN--STPTSQLSVVHCSAGVGRTGTYIACDLLLQCLQHNRKLNI 125
L+ F + ++ + +H G GRTGT ++ LL K +
Sbjct: 100 LVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEAL 154
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 38.9 bits (90), Expect = 4e-04
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 50 DSEVLEVKHFHLHDW--QDFSIPGGPDVLVNFCHLVRNSTPTSQLSVV--HCSAGVGRTG 105
D+ ++E + H+ DW D + P ++ ++ LV+ + HC AG+GR
Sbjct: 74 DTTLVEKEGIHVLDWPFDDGAPPS-NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAP 132
Query: 106 TYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSE-AQYVYLYQS 152
+A + V +R++R S+ Y+ Y+
Sbjct: 133 VLVA------LALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRP 174
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 39.2 bits (90), Expect = 4e-04
Identities = 16/96 (16%), Positives = 26/96 (27%), Gaps = 7/96 (7%)
Query: 58 HFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQ--LSVVHCSAGVGRTGTYIACDLLLQ 115
W P L C + N + + VVHC G + + +
Sbjct: 82 RVSECSWPIRQAPS-LHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFC 140
Query: 116 CLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
L + L +R + S + YL
Sbjct: 141 NLYSTPGPAVRL----LYAKRPGIGLSPSHRRYLGY 172
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 38.7 bits (89), Expect = 6e-04
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 49 KDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRN--STPTSQLSVVHCSAGVGRTGT 106
D+ + ++D + P +++ FC + S + ++ +HC AG GRTG
Sbjct: 70 YDTAKFNCRVAQYP-FEDHNPPQ-LELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGV 127
Query: 107 YIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQ 151
I LL + + ++R + V +Q Y+Y
Sbjct: 128 MICA-YLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYVYY 171
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.7 bits (87), Expect = 0.002
Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 45/172 (26%)
Query: 37 SSDSDYINASFIKDS-EVLEVKHFH--LHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLS 93
+DS SF + + V F + ++ + P ++ P+ LS
Sbjct: 285 ETDSW---ESFFVSVRKAITVL-FFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS 340
Query: 94 VVHCS-----AGVGRTGTYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMV-----QSE 143
+ + + V +T ++ L +++ I L ++V QS
Sbjct: 341 ISNLTQEQVQDYVNKTNSH---------LPAGKQVEI-----SLVNGAKNLVVSGPPQS- 385
Query: 144 AQYVYLYQSIASALESSDTLKLKSGDSSPSTPSKDDTPPFQNR----TAEFN 191
LY + L K SG P + F NR + F+
Sbjct: 386 -----LY-GLNLTLRK---AKAPSGLDQSRIPFSERKLKFSNRFLPVASPFH 428
Score = 37.3 bits (86), Expect = 0.003
Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 56/165 (33%)
Query: 42 YINASFIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGV 101
Y + +D V H D FSI +V N+ P + +H
Sbjct: 1636 YKTSKAAQD--VWNRADNHFKDTYGFSIL----------DIVINN-PVNL--TIHFGGEK 1680
Query: 102 GR--TGTYIA------CDLLLQCLQHNRKLN------IFRT---VLDLRE--QRAHMVQS 142
G+ Y A D L+ + +++N FR+ +L + Q A +
Sbjct: 1681 GKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLME 1740
Query: 143 EAQYVYL-------------------YQ---SIASALESSDTLKL 165
+A + L Y S+A + +++
Sbjct: 1741 KAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEV 1785
Score = 34.6 bits (79), Expect = 0.020
Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 67/138 (48%)
Query: 30 VPLLRDNSSDSDY---------INASFIKDS-------------EVLEVKHFHLHDWQDF 67
VP RD S+Y + ASF +++ ++E+
Sbjct: 1797 VP--RDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEI----------- 1843
Query: 68 SIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQCLQHNRKLNIFR 127
VN+ N Q V + G A D + L + I
Sbjct: 1844 ---------VNY-----NV-ENQQ--YV-AA------GDLRALDTVTNVLNFIKLQKI-- 1877
Query: 128 TVLDLREQ------RAHM 139
+++L++ H+
Sbjct: 1878 DIIELQKSLSLEEVEGHL 1895
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 35.9 bits (82), Expect = 0.003
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 30 VPLLRDNSSDSDYINASFIKDSEVLEVKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPT 89
+ L + F+K + + + F + ++ + + ++ +
Sbjct: 37 IIYLCPEPYPESNLQ--FLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNH 93
Query: 90 SQLSVVHCSAGVGRTGTYIACDLLLQ 115
L +HC G RTG + C LQ
Sbjct: 94 PVL--IHCKRGKHRTGCLVGCLRKLQ 117
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.8 bits (79), Expect = 0.016
Identities = 23/140 (16%), Positives = 42/140 (30%), Gaps = 26/140 (18%)
Query: 2 ELMNNNNNSNNTTNNNNNNKNSTDDTTRVPL------LRDNSSDSDYINASFIKDSEVLE 55
++ + N +++ ++ + LR Y N + V
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQN 255
Query: 56 VKHFHLHDWQDFSIPGGPDVLVNFCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLLQ 115
K W F++ +L+ R T LS T T+I+ D
Sbjct: 256 AKA-----WNAFNL--SCKILL----TTRFKQVTDFLS--------AATTTHISLDHHSM 296
Query: 116 CLQHNRKLNIFRTVLDLREQ 135
L + ++ LD R Q
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQ 316
Score = 33.3 bits (75), Expect = 0.061
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 34/150 (22%)
Query: 32 LLRDNSSDSDYIN-------ASFIKDS-EVL---EVKHFHLHDWQDFSI-PGGPDVLVNF 79
+RD + D + I+ S VL E + + S+ P P +
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM----FDRLSVFP--PSAHI-- 387
Query: 80 CHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDL----LLQCLQHNRKLNIFRTVLDLREQ 135
PT LS++ + + L L++ ++I L+L+ +
Sbjct: 388 --------PTILLSLIWF-DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 136 RAHMVQSEAQYVYLYQSIASALESSDTLKL 165
+ V Y I +S D +
Sbjct: 439 LENEYALHRSIVDHYN-IPKTFDSDDLIPP 467
Score = 28.3 bits (62), Expect = 2.1
Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 20/126 (15%)
Query: 97 CSAGVGRTGTYIAC-DLLLQCLQHNRKLNIFR--TVLDLREQRAHMVQSEAQYVYLY--- 150
T YI D L Q K N+ R L LR+ A + A+ V +
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ--ALLELRPAKNVLIDGVL 159
Query: 151 ----QSIASALESSDTLKLKSGD-------SSPSTPSKDDTPPFQNRTAEFNNNTPSDMD 199
+A + S ++ K + ++P + Q + + N S D
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP-ETVLEMLQKLLYQIDPNWTSRSD 218
Query: 200 SMVTSR 205
+
Sbjct: 219 HSSNIK 224
Score = 28.3 bits (62), Expect = 2.3
Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 39/166 (23%)
Query: 20 NKNSTDDTTRVP----LLRDNSSDSDYINASFIKDSEVLEVKHFHLHDWQDFSIPGGPDV 75
K + T +P L+ + ++ S + + + D D P
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT-----FDSDDLI----PPY 468
Query: 76 LVN--FCHLVRNSTPTSQLSVVHCSAGVGRTGTY-----IACDL--LLQCLQH-----NR 121
L + H+ H + + D L Q ++H N
Sbjct: 469 LDQYFYSHIGH-----------HLKN-IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 122 KLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDTLKLKS 167
+I T+ L+ + ++ ++ +Y L +I L + + S
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 33.1 bits (76), Expect = 0.023
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 95 VHCSAGVGRTGTYIAC 110
VHC AG R+ T +A
Sbjct: 94 VHCKAGRSRSATMVAA 109
>3vjj_A P9-1; 3.00A {Rice black streaked dwarf virus}
Length = 368
Score = 27.9 bits (61), Expect = 2.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 6 NNNNSNNTTNNNNNNKNSTDDTTRVPLLRD 35
N+ + NT ++ + + + T ++PLL D
Sbjct: 42 NDQPNRNTNSSTSQSTENRLSTKKIPLLDD 71
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA
degradation, allosteric REGU; HET: ADP 1PE; 2.40A
{Saccharomyces cerevisiae}
Length = 802
Score = 28.0 bits (62), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 106 TYIACDLLLQCLQHNRKLNIFRTVLDLREQRAHMVQSEAQYVYLYQSIASALESSDTLKL 165
+ +A D L L + L + R RE V + A + + + L+ + LKL
Sbjct: 413 SNVAVDHLAAKL-RDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK--NLLKL 469
Query: 166 K 166
K
Sbjct: 470 K 470
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding,
DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A
{Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Length = 263
Score = 27.5 bits (61), Expect = 3.3
Identities = 5/24 (20%), Positives = 8/24 (33%)
Query: 58 HFHLHDWQDFSIPGGPDVLVNFCH 81
H D +DFS+ +
Sbjct: 96 VLHHGDMRDFSLGRRFSAVTCMFS 119
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 27.4 bits (60), Expect = 3.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 95 VHCSAGVGRTGTYIAC 110
VH +AG+GR
Sbjct: 111 VHSTAGMGRAPAVALT 126
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 27.2 bits (59), Expect = 3.9
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 79 FCHLVRNSTPTSQLSVVHCSAGVGRTGTYIACDLLL 114
H V + + HC AG RTG +A L
Sbjct: 162 ALHRVVTLLAAGRPVLTHCFAGKDRTGFVVALVLEA 197
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate,
antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A
{Streptomyces venezuelae}
Length = 239
Score = 26.6 bits (59), Expect = 5.1
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 58 HFHLHDWQDFSIPGGPDVLVNFCH 81
H D +DF + +V+
Sbjct: 86 TLHQGDMRDFRLGRKFSAVVSMFS 109
>1nmb_N N9 neuraminidase; complex (hydrolase-immunoglobulin), complex
(hydrolase- immunoglobulin) complex; HET: NAG BMA MAN;
2.20A {Influenza a virus} SCOP: b.68.1.1
Length = 470
Score = 26.5 bits (58), Expect = 6.9
Identities = 6/34 (17%), Positives = 10/34 (29%)
Query: 5 NNNNNSNNTTNNNNNNKNSTDDTTRVPLLRDNSS 38
NN N T +N N + + +
Sbjct: 57 IINNYYNETNITQISNTNIQVEERASREFNNLTK 90
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural
genomics, protein structure initiative, PSI; 2.50A
{Clostridium acetobutylicum} SCOP: c.66.1.43
Length = 246
Score = 26.2 bits (58), Expect = 7.4
Identities = 3/24 (12%), Positives = 7/24 (29%)
Query: 58 HFHLHDWQDFSIPGGPDVLVNFCH 81
D + +I D++
Sbjct: 87 RLACQDISNLNINRKFDLITCCLD 110
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for
structural genomics O infectious diseases, alpha and
beta protein; HET: LLP; 2.65A {Bacillus anthracis}
Length = 392
Score = 26.3 bits (59), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 100 GVGRTGTYIACD 111
G+GRTG ACD
Sbjct: 227 GLGRTGKVFACD 238
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,837,173
Number of extensions: 150072
Number of successful extensions: 507
Number of sequences better than 10.0: 1
Number of HSP's gapped: 446
Number of HSP's successfully gapped: 114
Length of query: 205
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 116
Effective length of database: 4,216,824
Effective search space: 489151584
Effective search space used: 489151584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.6 bits)